RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XKR5 (Homo sapiens)

Ensembl gene IDs: ENSG00000275591

Ensembl transcript IDs: ENST00000618742.3, ENST00000618990.4, ENST00000642649.1, ENST00000647027.1

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCAGACTCAGCACGCGGGTTCCCAACATGCCCATCCTCCAGAGCTaGTGGCAGAAGAGGGCGGCCCATGGCATGGCCAGGTGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: TRLSTRVPNMPILQS*WQKRAAHGMARWPG
Trigger: GCCAGGCCACCTGGCCATGCCATGGGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGATGGGCATGTTGGGAACCCGCGTGCTGAGTCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp AGACTCAGCACGCGGGTTCCCAACATGCCCATCCTCCAGAGCTGCTaGCAGAAGAGGGCGGCCCATGGCATGGCCAGGTGGCCTGGCTTC +
Preference number: 1 (lower is better)
Translates to: RLSTRVPNMPILQSC*QKRAAHGMARWPGF
Trigger: GAAGCCAGGCCACCTGGCCATGCCATGGGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGATGGGCATGTTGGGAACCCGCGTGCTGAGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp GAGCTGCTGGCAGAAGAGGGCGGCCCATGGCATGGCCAGGTGGCCTaGCTTCATGAAGCCCATGAAGCGAGTGTAGGACACCAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: ELLAEEGGPWHGQVA*LHEAHEASVGHQCP
Trigger: TGGGCACTGGTGTCCTACACTCGCTTCATGGGCTTCATGAAGCCAGGCCACCTGGCCATGCCATGGGCCGCCCTCTTCTGCCAGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp AACAGCGTCAGCTCCTTCCTTTGGGGTGCCCTCCCCCTGCGTGGCTaGTGGGTTCTGGGTAGGTGCTTCATCCTGCTGATCGCTGGCAAA +
Preference number: 1 (lower is better)
Translates to: NSVSSFLWGALPLRG*WVLGRCFILLIAGK
Trigger: TTTGCCAGCGATCAGCAGGATGAAGCACCTACCCAGAACCCAGCAGCCACGCAGGGGGAGGGCACCCCAAAGGAAGGAGCTGACGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp CAGAGGATGTACACGGCCCCCACGAGCAGGTTGAACAGCCTCCAGTaGCAGGTGCTGTCGATGATGTCACTCTGCTGGGCGACAAGCCAG +
Preference number: 1 (lower is better)
Translates to: QRMYTAPTSRLNSLQ*QVLSMMSLCWATSQ
Trigger: CTGGCTTGTCGCCCAGCAGAGTGACATCATCGACAGCACCTGCCACTGGAGGCTGTTCAACCTGCTCGTGGGGGCCGTGTACATCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp TGGGCAGGGCTGCTCTTTCCCAGCCTCCTTCCAGAGTGGGCCGTTTaGAGAGTAGCTGGGCTGCCTTCTTGTTGTGAGGATGTGGCCACT +
Preference number: 1 (lower is better)
Translates to: WAGLLFPSLLPEWAV*RVAGLPSCCEDVAT
Trigger: AGTGGCCACATCCTCACAACAAGAAGGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGGAAGGAGGCTGGGAAAGAGCAGCCCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp GAGACACTGCCAATCAGAAATCCAGACAGGACCCCAGCTATGGTCTaGAGGCTGGTCCACGATGCCCCCTGGAGAAAGTCGGTGGCCAAC +
Preference number: 1 (lower is better)
Translates to: ETLPIRNPDRTPAMV*RLVHDAPWRKSVAN
Trigger: GTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGTCTGGATTTCTGATTGGCAGTGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp AGTCTTGGAGGACAAATGGGGAGGGCTGGTGAGGACTCAGGGAAGTaGTCATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: SLGGQMGRAGEDSGK*SCSHLAGRETAWRK
Trigger: CTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCATTTGTCCTCCAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 90 bp GACAGGACCCCAGCTATGGTCTGCAGGCTGGTCCACGATGCCCCCTaGAGAAAGTCGGTGGCCAACAGCAACAGGATGATGTTCTCCAAC +
Preference number: 1 (lower is better)
Translates to: DRTPAMVCRLVHDAP*RKSVANSNRMMFSN
Trigger: GTTGGAGAACATCATCCTGTTGCTGTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp CCAGTGAGACACTGCCAATCAGAAATCCAGACAGGACCCCAGCTATaGTCTGCAGGCTGGTCCACGATGCCCCCTGGAGAAAGTCGGTGG +
Preference number: 1 (lower is better)
Translates to: PVRHCQSEIQTGPQL*SAGWSTMPPGESRW
Trigger: CCACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR TCA 90 bp GTCCTCAGCTGTGGCAATGACACCCACACACCAACAGCTGCATGGTaGCTTAGCTCCCTTTTGGGCTCCAGCGGCTCCTCTAGCTCTGAG +
Preference number: 1 (lower is better)
Translates to: VLSCGNDTHTPTAAW*LSSLLGSSGSSSSE
Trigger: CTCAGAGCTAGAGGAGCCGCTGGAGCCCAAAAGGGAGCTAAGTCACCATGCAGCTGTTGGTGTGTGGGTGTCATTGCCACAGCTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp AGGTTGAACAGCCTCCAGTGGCAGGTGCTGTCGATGATGTCACTCTaGTGGGCGACAAGCCAGAATGTCATCACCAGCCAGTGGGCACCT +
Preference number: 1 (lower is better)
Translates to: RLNSLQWQVLSMMSL*WATSQNVITSQWAP
Trigger: AGGTGCCCACTGGCTGGTGATGACATTCTGGCTTGTCGCCCAGCAGAGTGACATCATCGACAGCACCTGCCACTGGAGGCTGTTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp TTGAACAGCCTCCAGTGGCAGGTGCTGTCGATGATGTCACTCTGCTaGGCGACAAGCCAGAATGTCATCACCAGCCAGTGGGCACCTGCA +
Preference number: 1 (lower is better)
Translates to: LNSLQWQVLSMMSLC*ATSQNVITSQWAPA
Trigger: TGCAGGTGCCCACTGGCTGGTGATGACATTCTGGCTTGTCGCCCAGCAGAGTGACATCATCGACAGCACCTGCCACTGGAGGCTGTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp TGCCAATCAGAAATCCAGACAGGACCCCAGCTATGGTCTGCAGGCTaGTCCACGATGCCCCCTGGAGAAAGTCGGTGGCCAACAGCAACA +
Preference number: 1 (lower is better)
Translates to: CQSEIQTGPQLWSAG*STMPPGESRWPTAT
Trigger: TGTTGCTGTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGTCTGGATTTCTGATTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR TCA 90 bp TCCAGAGTGGGCCGTTTGCAGAGTAGCTGGGCTGCCTTCTTGTTGTaGGGATGTGGCCACTTCTGCAGTGGCGCTGAAGTACAACGTGGA +
Preference number: 1 (lower is better)
Translates to: SRVGRLQSSWAAFLL*GCGHFCSGAEVQRG
Trigger: TCCACGTTGTACTTCAGCGCCACTGCAGAAGTGGCCACATCCTCACAACAAGAAGGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp AAATCCAGACAGGACCCCAGCTATGGTCTGCAGGCTGGTCCACGATaGCCCCTGGAGAAAGTCGGTGGCCAACAGCAACAGGATGATGTT +
Preference number: 1 (lower is better)
Translates to: KSRQDPSYGLQAGPR*PLEKVGGQQQQDDV
Trigger: AACATCATCCTGTTGCTGTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGTCTGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp GCTGCAGCCAGCCTCGGTGGGGAGCCTCCAGTTCCTTCTGCAGACTaGTCAGTGCAGCGTCCCAGTGCCTTTAGAGTTTACCTTAACTTT +
Preference number: 1 (lower is better)
Translates to: AAASLGGEPPVPSAD*SVQRPSAFRVYLNF
Trigger: AAAGTTAAGGTAAACTCTAAAGGCACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCACCGAGGCTGGCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp GTTTGGATAGACTCAGACTTAGGGGTGGACGTGAGGCAGGGCTCATaGGCAGTCCTCAGCTGTGGCAATGACACCCACACACCAACAGCT +
Preference number: 1 (lower is better)
Translates to: VWIDSDLGVDVRQGS*AVLSCGNDTHTPTA
Trigger: AGCTGTTGGTGTGTGGGTGTCATTGCCACAGCTGAGGACTGCCCATGAGCCCTGCCTCACGTCCACCCCTAAGTCTGAGTCTATCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp AAACTCGGCTCTTGCTTCATCTGTTCCCTGCAGCTGCAGTCCGTTTaGATAGACTCAGACTTAGGGGTGGACGTGAGGCAGGGCTCATGG +
Preference number: 1 (lower is better)
Translates to: KLGSCFICSLQLQSV*IDSDLGVDVRQGSW
Trigger: CCATGAGCCCTGCCTCACGTCCACCCCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTGCAGGGAACAGATGAAGCAAGAGCCGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR TCA 90 bp CCTGGCACAATATCTGTGAAGTCTGAGGCTAGAAAAACATATGTCTaGAGCAGCAGGTGGGGCCCAGTCTGCAGCAGGGCCTCCAAGAGT +
Preference number: 1 (lower is better)
Translates to: PGTISVKSEARKTYV*SSRWGPVCSRASKS
Trigger: ACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCTGCTGCTTCAGACATATGTTTTTCTAGCCTCAGACTTCACAGATATTGTGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp AGACAAGGCCTTTCTCTGCAGGTAGTCCTGTTGACTCAACCCCCATaGAGGTGGACAATAGGCAGGACTGTTATCTCCAAAGGCGGCATT +
Preference number: 1 (lower is better)
Translates to: RQGLSLQVVLLTQPP*RWTIGRTVISKGGI
Trigger: AATGCCGCCTTTGGAGATAACAGTCCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAGAGAAAGGCCTTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp GGCCTTTCTCTGCAGGTAGTCCTGTTGACTCAACCCCCATGCAGGTaGACAATAGGCAGGACTGTTATCTCCAAAGGCGGCATTGATCTT +
Preference number: 1 (lower is better)
Translates to: GLSLQVVLLTQPPCR*TIGRTVISKGGIDL
Trigger: AAGATCAATGCCGCCTTTGGAGATAACAGTCCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAGAGAAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp GAAAGCAGCAGTGGGAGCTGGAAGGGAACTCTTGGCTGGCCAGCCTaGACAAAGGGGAGCAGCACATTTCACAGAAAAATACATTTATGC +
Preference number: 1 (lower is better)
Translates to: ESSSGSWKGTLGWPA*TKGSSTFHRKIHLC
Trigger: GCATAAATGTATTTTTCTGTGAAATGTGCTGCTCCCCTTTGTGCAGGCTGGCCAGCCAAGAGTTCCCTTCCAGCTCCCACTGCTGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 90 bp CTGCAATGCCACAGGACTTCCTTAGGCAGCCCTGCCAGATGTCTGTaGATTTTGGATGCAGCAGGCTGTAATAAATTACCAGTGAGACAC +
Preference number: 1 (lower is better)
Translates to: LQCHRTSLGSPARCL*ILDAAGCNKLPVRH
Trigger: GTGTCTCACTGGTAATTTATTACAGCCTGCTGCATCCAAAATCCACAGACATCTGGCAGGGCTGCCTAAGGAAGTCCTGTGGCATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 90 bp GGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATaGCCAGCTTGGTTTGTCAGCCTGTTGTCTTATCCCACCATGACT +
Preference number: 1 (lower is better)
Translates to: GHRCQKWDFLSHGTK*PAWFVSLLSYPTMT
Trigger: AGTCATGGTGGGATAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 90 bp TGGTTTGTCAGCCTGTTGTCTTATCCCACCATGACTGTGGTCAGATaGAAAAACTCGGCTCTTGCTTCATCTGTTCCCTGCAGCTGCAGT +
Preference number: 1 (lower is better)
Translates to: WFVSLLSYPTMTVVR*KNSALASSVPCSCS
Trigger: ACTGCAGCTGCAGGGAACAGATGAAGCAAGAGCCGAGTTTTTTCATCTGACCACAGTCATGGTGGGATAAGACAACAGGCTGACAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 90 bp TCATTTTTCAGGGATGCAGATGGAGATTCAGAGGTGACAGTGATGTaGCCAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGG +
Preference number: 1 (lower is better)
Translates to: SFFRDADGDSEVTVM*PRTQVSEVGFPFSR
Trigger: CCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTGGGCACATCACTGTCACCTCTGAATCTCCATCTGCATCCCTGAAAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 90 bp CTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATaGTGGGATAGCACAGTGAATGGAACTATGAATGATTTTGTTCTA +
Preference number: 1 (lower is better)
Translates to: LSPGWARDCMEEGLR*WDSTVNGTMNDFVL
Trigger: TAGAACAAAATCATTCATAGTTCCATTCACTGTGCTATCCCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 90 bp TGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTaGTTTGTCAGCCTGTTGTCTTATCCCACCATGACTGTGGTCAGA +
Preference number: 1 (lower is better)
Translates to: CQKWDFLSHGTKWPA*FVSLLSYPTMTVVR
Trigger: TCTGACCACAGTCATGGTGGGATAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR TCA 90 bp TACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCTaGAATTCATGCCCACAGCCCCGCTCGTTAGTGAATTCATGCTGT +
Preference number: 1 (lower is better)
Translates to: YPITQMPLIQDMHSS*NSCPQPRSLVNSCC
Trigger: ACAGCATGAATTCACTAACGAGCGGGGCTGTGGGCATGAATTTCAGCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATaGAGATGGAGATTCAGAGGTGACAGTGATGTGCCCAAGGACACA +
Preference number: 1 (lower is better)
Translates to: WTCKIIQPCFFIFQG*RWRFRGDSDVPKDT
Trigger: TGTGTCCTTGGGCACATCACTGTCACCTCTGAATCTCCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 90 bp CTGAGAAGCCGATGTTGGTCCACAGGGCCTCGAACAGCAAGTACATaGCTTGATTTCTGCATACTCAGTGCCTGTCATACTCAACTAATA +
Preference number: 1 (lower is better)
Translates to: LRSRCWSTGPRTAST*LDFCILSACHTQLI
Trigger: TATTAGTTGAGTATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCCCTGTGGACCAACATCGGCTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 90 bp CCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGTaGTGTTTGCATTGGACCTGCAAAATCATCCAGCCCTGTTTCTTC +
Preference number: 1 (lower is better)
Translates to: PLKYVRVSPMHGWGL*CLHWTCKIIQPCFF
Trigger: GAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 90 bp AAGCCGATGTTGGTCCACAGGGCCTCGAACAGCAAGTACATGCCTTaGTTTCTGCATACTCAGTGCCTGTCATACTCAACTAATATTCCT +
Preference number: 1 (lower is better)
Translates to: KPMLVHRASNSKYMP*FLHTQCLSYSTNIP
Trigger: AGGAATATTAGTTGAGTATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCCCTGTGGACCAACATCGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 90 bp TCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTaGGATAGCACAGTGAATGGAACTATGAATGATTTTGTTCTATTA +
Preference number: 1 (lower is better)
Translates to: SPGWARDCMEEGLRC*DSTVNGTMNDFVLL
Trigger: TAATAGAACAAAATCATTCATAGTTCCATTCACTGTGCTATCCCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CCA 90 bp AGGGTTCTTCCAGGGAAGCCTGCACTGGGGCAGAAGCCTCTACATGGGCCTGTGCATGGCATGGCCAGGTaGCCTGGCTTCATGAAGCCC +
Preference number: 2 (lower is better)
Translates to: RVLPGKPALGQKPLHGPVHGMAR*PGFMKP
Trigger: GGGCTTCATGAAGCCAGGCCACCTGGCCATGCCATG...CACAGGCCCATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTGGAAGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 90 bp GGGAGGGCCCAGGAAGGCACCAAGAGGAGATGTTTGAGTGGAGTCTaGGAGGACAAATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCT +
Preference number: 2 (lower is better)
Translates to: GRAQEGTKRRCLSGV*EDKWGGLVRTQGSA
Trigger: AGCACTTCCCTGAGTCCTCACCAGCCCTCCCCATTTGTCCTCCAAGACTCCACTCAAACATCTCCTCTTGGTGCCTTCCTGGGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR GCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGTTGACTCAACCCCCATaGAGGTGGACAATAGGCAGG +
Preference number: 2 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGLTQPP*RWTIGR
Trigger: CCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAA...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGGGGTGCCCTCCCCCTaGGTGGCTGCTGGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPGVPSP*VAAGFW
Trigger: CCAGAACCCAGCAGCCACGCAGGGGGAGGGCACCCC...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGACTATGGTCTGCAGGCTaGTCCACGATGCCCCCTGGA +
Preference number: 2 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGLWSAG*STMPPG
Trigger: TCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAG...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGACAGGACCCCAGCTATaGTCTGCAGGCTGGTCCACG +
Preference number: 2 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQTGPQL*SAGWST
Trigger: CGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGT...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGTCGATGATGTCACTCTaGTGGGCGACAAGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGSMMSL*WATSQN
Trigger: ATTCTGGCTTGTCGCCCAGCAGAGTGACATCATCGA...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp AGGGTTCTTCCAGGGAAGCCTGCACTGGGGCAGAAGCCTCTACATGGGCCTGTGCCTGCCAGATGTCTGTaGATTTTGGATGCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: RVLPGKPALGQKPLHGPVPARCL*ILDAAG
Trigger: GCCTGCTGCATCCAAAATCCACAGACATCTGGCAGG...CACAGGCCCATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTGGAAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR TCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGCTAGCTCTGAGATACTaGGGGTTCTTCCAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWLALRY*GFFQGS
Trigger: GCTTCCCTGGAAGAACCCTCAGTATCTCAGAGCTAG...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGAGTAGCCAGGCATGGTaGCCACCTGCCAGTAGTCCC +
Preference number: 2 (lower is better)
Translates to: KFVATCLHPRLAYVAGQESSQAW*PPASSP
Trigger: GGGACTACTGGCAGGTGGGCACCATGCCTGGCTACT...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR GCA 90 bp AGGGTTCTTCCAGGGAAGCCTGCACTGGGGCAGAAGCCTCTACATGGGCCTGTGTTCCTTAGGCAGCCCTaGCAGATGTCTGTGGATTTT +
Preference number: 2 (lower is better)
Translates to: RVLPGKPALGQKPLHGPVFLRQP*QMSVDF
Trigger: AAAATCCACAGACATCTGGCAGGGCTGCCTAAGGAA...CACAGGCCCATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTGGAAGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGAGAGGTGACAGTGATGTaGCCAAGGACACAGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGEVTVM*PRTQVS
Trigger: TGACACCTGTGTCCTTGGGCACATCACTGTCACCTC...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 90 bp GAGCTCTTGCTGGGCAGACAAGGCCTTTCTCTGCAGGTAGTCCTGTaGACTCAACCCCCATGCAGGTGGACAATAGGCAGGACTGTTATC +
Preference number: 2 (lower is better)
Translates to: ELLLGRQGLSLQVVL*TQPPCRWTIGRTVI
Trigger: GATAACAGTCCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAGAGAAAGGCCTTGTCTGCCCAGCAAGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 90 bp AAAACTCGGCTCTTGCTTCATCTGTTCCCTGCAGCTGCAGTCCGTTaGGATAGACTCAGACTTAGGGGTGGACGTGAGGCAGGGCTCATG +
Preference number: 2 (lower is better)
Translates to: KTRLLLHLFPAAAVR*DRLRLRGGREAGLM
Trigger: CATGAGCCCTGCCTCACGTCCACCCCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTGCAGGGAACAGATGAAGCAAGAGCCGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR TCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTGGCTGTCCCAGAAGCTaGGGTAGCAGAGGATGTACA +
Preference number: 2 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCGCPRS*GSRGCT
Trigger: TGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCC...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGAGAAGAGGGCGGCCCATaGCATGGCCAGGTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGEEGGP*HGQVAW
Trigger: CCAGGCCACCTGGCCATGCCATGGGCCGCCCTCTTC...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGGCTTCATCTGTTCCCTaGAGCTGCAGTCCGTTTGGA +
Preference number: 2 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPASSVP*SCSPFG
Trigger: TCCAAACGGACTGCAGCTGCAGGGAACAGATGAAGC...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATACTTGGCTGGCCAGCCTaGACAAAGGGGAGCAGCACA +
Preference number: 2 (lower is better)
Translates to: GLEQQVHALISAYSVPVILGWPA*TKGSST
Trigger: TGTGCTGCTCCCCTTTGTGCAGGCTGGCCAGCCAAG...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR GCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATAAGTAGCCAGGCATGGTaGCCACCTGCCAGTAGTCCC +
Preference number: 2 (lower is better)
Translates to: GLEQQVHALISAYSVPVISSQAW*PPASSP
Trigger: GGGACTACTGGCAGGTGGGCACCATGCCTGGCTACT...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGTTGAACAGCCTCCAGTaGCAGGTGCTGTCGATGATG +
Preference number: 2 (lower is better)
Translates to: KFVATCLHPRLAYVAGQELNSLQ*QVLSMM
Trigger: CATCATCGACAGCACCTGCCACTGGAGGCTGTTCAA...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGTCCACGATGCCCCCTaGAGAAAGTCGGTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: APLVSEFMLLNALTPTFAVHDAP*RKSVAN
Trigger: GTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGAC...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGCACAGGTGTCAGAAGTaGGATTTCCTTTCTCACGGT +
Preference number: 2 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQHRCQK*DFLSHG
Trigger: ACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTG...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR TCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGATGACTGTGGTCAGATaGAAAAACTCGGCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQMTVVR*KNSALA
Trigger: AGCAAGAGCCGAGTTTTTTCATCTGACCACAGTCAT...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp TCTCTTCTCTCTGTTTTATCACCTCCTGCAATGCCACAGGACTTCCTTAGGCAGGCCTCCAGTTCCTTCTaGAGACTGGTCAGTGCAGCG +
Preference number: 2 (lower is better)
Translates to: SLLSVLSPPAMPQDFLRQASSSF*RLVSAA
Trigger: CGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGC...CTGCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACAGAGAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGAAGGTGGGGCCCAGTCTaGAGCAGGGCCTCCAAGAGT +
Preference number: 2 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGRWGPV*SRASKS
Trigger: ACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCT...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATACCCCAGCTATGGTCTaGAGGCTGGTCCACGATGCC +
Preference number: 2 (lower is better)
Translates to: PISHPYFYPITQMPLIQDTPAMV*RLVHDA
Trigger: GGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGT...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp CCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCCCTTCCCCTCCTCTCTaGTGCCCACCTGTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: PYFYPITQMPLIQDMHSSPSPPL*CPPVPF
Trigger: GAAGGGGACAGGTGGGCAGCAGAGAGGAGGGGAAGG...GCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTTTCAGGGATGCAGATaGAGATTCAGAGGTGACAGT +
Preference number: 2 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQFQGCR*RFRGDS
Trigger: ACTGTCACCTCTGAATCTCCATCTGCATCCCTGAAA...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR GCA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAACCCATCCTCCAGAGCTaGTGGCAGAAGAGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKPILQS*WQKRAA
Trigger: GGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGATGGG...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAGAGGATGGGAGCTCTTaGTGGGCAGACAAGGCCTTT +
Preference number: 2 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPEDGSS*WADKAF
Trigger: AAAGGCCTTGTCTGCCCAGCAAGAGCTCCCATCCTC...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGTGCAGCCAGCCTCGGTaGGGAGCCTCCAGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLCSQPR*GASSSF
Trigger: GAAGGAACTGGAGGCTCCCCACCGAGGCTGGCTGCA...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATAAGCCTCCTTCCAGAGTaGGCCGTTTGCAGAGTAGCT +
Preference number: 2 (lower is better)
Translates to: GLEQQVHALISAYSVPVISLLPE*AVCRVA
Trigger: AGCTACTCTGCAAACGGCCCACTCTGGAAGGAGGCT...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 90 bp TGCCACAGGACTTCCTTAGGCAGCCCTGCCAGATGTCTGTGGATTTaGGATGCAGCAGGCTGTAATAAATTACCAGTGAGACACTGCCAA +
Preference number: 2 (lower is better)
Translates to: CHRTSLGSPARCLWI*DAAGCNKLPVRHCQ
Trigger: TTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGCTGCATCCAAAATCCACAGACATCTGGCAGGGCTGCCTAAGGAAGTCCTGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 90 bp GTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTaGGTTTGTCAGCCTGTTGTCTTATCCCACCATGACTGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: VSEVGFPFSRYQMAS*VCQPVVLSHHDCGQ
Trigger: CTGACCACAGTCATGGTGGGATAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 90 bp CTGAAATTCATGCCCACAGCCCCGCTCGTTAGTGAATTCATGCTGTaGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCT +
Preference number: 2 (lower is better)
Translates to: LKFMPTAPLVSEFML*NALTPTFAGHSAGP
Trigger: AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGCTGTGGGCATGAATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR TCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTAGCTGCCTTCTTGTTGTaGGGATGTGGCCACTTCTGC +
Preference number: 2 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLAAFLL*GCGHFC
Trigger: GCAGAAGTGGCCACATCCTCACAACAAGAAGGCAGC...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAGTCATCACCAGCCAGTaGGCACCTGCAACCACAAAA +
Preference number: 2 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPVITSQ*APATTK
Trigger: TTTTGTGGTTGCAGGTGCCCACTGGCTGGTGATGAC...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGGACTTAGCTCCCTTTTaGGCTCCAGCGGCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWDLAPF*APAAPL
Trigger: TAGAGGAGCCGCTGGAGCCCAAAAGGGAGCTAAGTC...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 90 bp AAAGTCTCGTTATCTTCACCTGTTGTATGGAAAGTTTGTAGCCACTaGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: KVSLSSPVVWKVCSH*SASPIGLCGWPGGC
Trigger: GCATCCTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTTTCCATACAACAGGTGAAGATAACGAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR TCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAAGAAAAACATATGTCTaGAGCAGCAGGTGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPRKTYV*SSRWGP
Trigger: TGGGCCCCACCTGCTGCTTCAGACATATGTTTTTCT...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATTGGGTTCTGGGTAGGTaGTTCATCCTGCTGATCGCT +
Preference number: 2 (lower is better)
Translates to: PISHPYFYPITQMPLIQDWVLGR*FILLIA
Trigger: AGCGATCAGCAGGATGAAGCACCTACCCAGAACCCA...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTAGGATGTGGCCACTTCTaGAGTGGCGCTGAAGTACAA +
Preference number: 2 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLGCGHF*SGAEVQ
Trigger: TTGTACTTCAGCGCCACTGCAGAAGTGGCCACATCC...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGAGAAAAATACATTTATaGAGCTGGCCAGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: KFVATCLHPRLAYVAGQERKIHL*SWPGGC
Trigger: GCATCCTCCTGGCCAGCTGCATAAATGTATTTTTCT...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTATCCTCCAGAGCTGCTaGCAGAAGAGGGCGGCCCAT +
Preference number: 2 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSILQSC*QKRAAH
Trigger: ATGGGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGAT...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGTCCCAGCTAGATCTGTaGCCCGGGGAGAATCTCTTC +
Preference number: 2 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMSQLDL*PGENLF
Trigger: GAAGAGATTCTCCCCGGGCCACAGATCTAGCTGGGA...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR GCA 90 bp CCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCTACAACGTGGAACTCTaGTGTCCTTCCCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: PYFYPITQMPLIQDMHSSYNVEL*CPSPPL
Trigger: GAGAGGAGGGGAAGGACAGCAGAGTTCCACGTTGTA...GCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGATGATGTCACTCTGCTaGGCGACAAGCCAGAATGTC +
Preference number: 2 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWMMSLC*ATSQNV
Trigger: GACATTCTGGCTTGTCGCCCAGCAGAGTGACATCAT...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATTCTCACGGTACCAAATaGCCAGCTTGGTTTGTCAGC +
Preference number: 2 (lower is better)
Translates to: PISHPYFYPITQMPLIQDSHGTK*PAWFVS
Trigger: GCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGA...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR GCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGAGGTGACAGTGATGTaGCCAAGGACACAGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLEVTVM*PRTQVS
Trigger: TGACACCTGTGTCCTTGGGCACATCACTGTCACCTC...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR GCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATATGTTTGCATTGGACCTaGAAAATCATCCAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: GLEQQVHALISAYSVPVICLHWT*KIIQPC
Trigger: ACAGGGCTGGATGATTTTGCAGGTCCAATGCAAACA...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACCATGGCCAGGTGGCCTaGCTTCATGAAGCCCATGAA +
Preference number: 2 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDHGQVA*LHEAHE
Trigger: TTCATGGGCTTCATGAAGCCAGGCCACCTGGCCATG...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATACATCCTGCTGATCGCTaGCAAAAGATACGTAACTTG +
Preference number: 2 (lower is better)
Translates to: GLEQQVHALISAYSVPVIHPADR*QKIRNL
Trigger: CAAGTTACGTATCTTTTGCCAGCGATCAGCAGGATG...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATCACAGGTGTCAGAAGTaGGATTTCCTTTCTCACGGT +
Preference number: 2 (lower is better)
Translates to: PISHPYFYPITQMPLIQDHRCQK*DFLSHG
Trigger: ACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTG...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATTTCAGGGATGCAGATaGAGATTCAGAGGTGACAGT +
Preference number: 2 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPFQGCR*RFRGDS
Trigger: ACTGTCACCTCTGAATCTCCATCTGCATCCCTGAAA...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 90 bp GAGAGAAGGAGAGTGCGAGAGGAATGGACGTTTCCTCCCTTCTTTTaGGATGGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAG +
Preference number: 2 (lower is better)
Translates to: ERRRVREEWTFPPFF*DGLKSWIVSHIEWK
Trigger: CTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCCATCCAAAAAGAAGGGAGGAAACGTCCATTCCTCTCGCACTCTCCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR TCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTCTGGCACAATATCTGTaGAGTCTGAGGCTAGAAAAA +
Preference number: 2 (lower is better)
Translates to: APLVSEFMLLNALTPTFALAQYL*SLRLEK
Trigger: TTTTTCTAGCCTCAGACTTCACAGATATTGTGCCAG...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR TCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTCTTCTGCAGTGGCGCTaGAGTACAACGTGGAACTCT +
Preference number: 2 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSLLQWR*STTWNS
Trigger: AGAGTTCCACGTTGTACTTCAGCGCCACTGCAGAAG...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATGTTCCTTCTGCAGACTaGTCAGTGCAGCGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: LVITSTQALPTPRKHANYVPSAD*SVQRPS
Trigger: ACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAAC...ATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGACCAAATGGCCAGCTTaGTTTGTCAGCCTGTTGTCT +
Preference number: 2 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLTKWPA*FVSLLS
Trigger: AGACAACAGGCTGACAAACCAAGCTGGCCATTTGGT...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATACACATTGAATGGAAGTaGGAACAAAGCTTGGACATA +
Preference number: 2 (lower is better)
Translates to: GLEQQVHALISAYSVPVIHIEWK*EQSLDI
Trigger: TATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTG...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR GCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTTTAGAGTCTCTCCTATaGATGGGTGGGGTCTGTGAT +
Preference number: 2 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSLESLL*MGGVCD
Trigger: ATCACAGACCCCACCCATGCATAGGAGAGACTCTAA...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTAGTCTCTCCTATGCATaGGTGGGGTCTGTGATGTTT +
Preference number: 2 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSSLSYA*VGSVMF
Trigger: AAACATCACAGACCCCACCCATGCATAGGAGAGACT...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR TCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTAAAAGATACGTAACTTaGGGTTTCCAATGGGTCGGC +
Preference number: 2 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSKRYVT*GFQWVG
Trigger: GCCGACCCATTGGAAACCTCAAGTTACGTATCTTTT...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTCAGCTGCAGTCCGTTTaGATAGACTCAGACTTAGGG +
Preference number: 2 (lower is better)
Translates to: SSFPGYSRARKFEKNEQIQLQSV*IDSDLG
Trigger: CCCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTG...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR TCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACGGTAGCAGACAATTTTaGCTGGAATCTCTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDGSRQF*LESLSP
Trigger: AGGAGAAAGAGATTCCAGTCAAAATTGTCTGCTACC...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 72 bp AGCACGCGGGTTCCCAACATGCCCATCCTCCAGAGCTaGTGGCAGAAGAGGGCGGCCCATGGCATGGCCAGG +
Preference number: 3 (lower is better)
Translates to: STRVPNMPILQS*WQKRAAHGMAR
Trigger: CCTGGCCATGCCATGGGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGATGGGCATGTTGGGAACCCGCGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp CCCCTGTGTCCCAGAAACAGCGTCAGCTCCTTCCTTTaGGGTGCCCTCCCCCTGCGTGGCTGCTGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PLCPRNSVSSFL*GALPLRGCWVL
Trigger: CAGAACCCAGCAGCCACGCAGGGGGAGGGCACCCCAAAGGAAGGAGCTGACGCTGTTTCTGGGACACAGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp ACAGCGTCAGCTCCTTCCTTTGGGGTGCCCTCCCCCTaGGTGGCTGCTGGGTTCTGGGTAGGTGCTTCATCC +
Preference number: 3 (lower is better)
Translates to: TASAPSFGVPSP*VAAGFWVGASS
Trigger: GGATGAAGCACCTACCCAGAACCCAGCAGCCACGCAGGGGGAGGGCACCCCAAAGGAAGGAGCTGACGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp CAGGACCCCAGCTATGGTCTGCAGGCTGGTCCACGATaGCCCCTGGAGAAAGTCGGTGGCCAACAGCAACAG +
Preference number: 3 (lower is better)
Translates to: QDPSYGLQAGPR*PLEKVGGQQQQ
Trigger: CTGTTGCTGTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATaGTCTCACCTGGCTGGGCGAGAGACTGCATGGAGG +
Preference number: 3 (lower is better)
Translates to: MGRAGEDSGKCS*SHLAGRETAWR
Trigger: CCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 72 bp GCAGAAGAGGGCGGCCCATGGCATGGCCAGGTGGCCTaGCTTCATGAAGCCCATGAAGCGAGTGTAGGACAC +
Preference number: 3 (lower is better)
Translates to: AEEGGPWHGQVA*LHEAHEASVGH
Trigger: GTGTCCTACACTCGCTTCATGGGCTTCATGAAGCCAGGCCACCTGGCCATGCCATGGGCCGCCCTCTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp TGGGCAGGGCTGCTCTTTCCCAGCCTCCTTCCAGAGTaGGCCGTTTGCAGAGTAGCTGGGCTGCCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: WAGLLFPSLLPE*AVCRVAGLPSC
Trigger: ACAAGAAGGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGGAAGGAGGCTGGGAAAGAGCAGCCCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp CCAGCTATGGTCTGCAGGCTGGTCCACGATGCCCCCTaGAGAAAGTCGGTGGCCAACAGCAACAGGATGATG +
Preference number: 3 (lower is better)
Translates to: PAMVCRLVHDAP*RKSVANSNRMM
Trigger: CATCATCCTGTTGCTGTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp AGCCTCCAGTGGCAGGTGCTGTCGATGATGTCACTCTaGTGGGCGACAAGCCAGAATGTCATCACCAGCCAG +
Preference number: 3 (lower is better)
Translates to: SLQWQVLSMMSL*WATSQNVITSQ
Trigger: CTGGCTGGTGATGACATTCTGGCTTGTCGCCCAGCAGAGTGACATCATCGACAGCACCTGCCACTGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp AGCCTCGGTGGGGAGCCTCCAGTTCCTTCTGCAGACTaGTCAGTGCAGCGTCCCAGTGCCTTTAGAGTTTAC +
Preference number: 3 (lower is better)
Translates to: SLGGEPPVPSAD*SVQRPSAFRVY
Trigger: GTAAACTCTAAAGGCACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCACCGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp CTCCAGTGGCAGGTGCTGTCGATGATGTCACTCTGCTaGGCGACAAGCCAGAATGTCATCACCAGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: LQWQVLSMMSLC*ATSQNVITSQW
Trigger: CCACTGGCTGGTGATGACATTCTGGCTTGTCGCCCAGCAGAGTGACATCATCGACAGCACCTGCCACTGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp CACTGCCAATCAGAAATCCAGACAGGACCCCAGCTATaGTCTGCAGGCTGGTCCACGATGCCCCCTGGAGAA +
Preference number: 3 (lower is better)
Translates to: HCQSEIQTGPQL*SAGWSTMPPGE
Trigger: TTCTCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGTCTGGATTTCTGATTGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp GAAAGCAGCAGTGGGAGCTGGAAGGGAACTCTTGGCTaGCCAGCCTGCACAAAGGGGAGCAGCACATTTCAC +
Preference number: 3 (lower is better)
Translates to: ESSSGSWKGTLG*PACTKGSSTFH
Trigger: GTGAAATGTGCTGCTCCCCTTTGTGCAGGCTGGCCAGCCAAGAGTTCCCTTCCAGCTCCCACTGCTGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 72 bp GGCCGTTTGCAGAGTAGCTGGGCTGCCTTCTTGTTGTaGGGATGTGGCCACTTCTGCAGTGGCGCTGAAGTA +
Preference number: 3 (lower is better)
Translates to: GRLQSSWAAFLL*GCGHFCSGAEV
Trigger: TACTTCAGCGCCACTGCAGAAGTGGCCACATCCTCACAACAAGAAGGCAGCCCAGCTACTCTGCAAACGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp CCTCCTGCAATGCCACAGGACTTCCTTAGGCAGCCCTaGCAGATGTCTGTGGATTTTGGATGCAGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: PPAMPQDFLRQP*QMSVDFGCSRL
Trigger: CAGCCTGCTGCATCCAAAATCCACAGACATCTGGCAGGGCTGCCTAAGGAAGTCCTGTGGCATTGCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp CTGCTCTTTCCCAGCCTCCTTCCAGAGTGGGCCGTTTaGAGAGTAGCTGGGCTGCCTTCTTGTTGTGAGGAT +
Preference number: 3 (lower is better)
Translates to: LLFPSLLPEWAV*RVAGLPSCCED
Trigger: ATCCTCACAACAAGAAGGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGGAAGGAGGCTGGGAAAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp GAAGTGCTCATGCTCTCACCTGGCTGGGCGAGAGACTaGATGGAGGAAGGACTGAGATGCTGGGATAGCACA +
Preference number: 3 (lower is better)
Translates to: EVLMLSPGWARD*MEEGLRCWDST
Trigger: TGTGCTATCCCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCATGAGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 72 bp TTAGGGCAAGTTTCACCCACAGCCAGTGGTGATGACTaGGGAAAGAGTCCTCCACAGCAACCTGGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: LGQVSPTASGDD*GKSPPQQPGSP
Trigger: TGGGGACCCAGGTTGCTGTGGAGGACTCTTTCCTCAGTCATCACCACTGGCTGTGGGTGAAACTTGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR TCA 72 bp CTTGTTGTGAGGATGTGGCCACTTCTGCAGTGGCGCTaGAGTACAACGTGGAACTCTGCTGTCCTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: LVVRMWPLLQWR*STTWNSAVLPL
Trigger: GAGGGGAAGGACAGCAGAGTTCCACGTTGTACTTCAGCGCCACTGCAGAAGTGGCCACATCCTCACAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp CTGCAGGTAGTCCTGTTGACTCAACCCCCATGCAGGTaGACAATAGGCAGGACTGTTATCTCCAAAGGCGGC +
Preference number: 3 (lower is better)
Translates to: LQVVLLTQPPCR*TIGRTVISKGG
Trigger: GCCGCCTTTGGAGATAACAGTCCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CAA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTACCAAATGGCCAGCTaGGTTTGTCAGCCTGTTGTC +
Preference number: 3 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQYQMAS*VCQPVV
Trigger: GACAACAGGCTGACAAACCAAGCTGGCCATTTGGTA...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 72 bp GTGGGGAGCCTCCAGTTCCTTCTGCAGACTGGTCAGTaGAGCGTCCCAGTGCCTTTAGAGTTTACCTTAACT +
Preference number: 3 (lower is better)
Translates to: VGSLQFLLQTGQ*SVPVPLEFTLT
Trigger: AGTTAAGGTAAACTCTAAAGGCACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp TCTTGCTTCATCTGTTCCCTGCAGCTGCAGTCCGTTTaGATAGACTCAGACTTAGGGGTGGACGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SCFICSLQLQSV*IDSDLGVDVRQ
Trigger: CTGCCTCACGTCCACCCCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTGCAGGGAACAGATGAAGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CAA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGAGCCCCCACGAGCAGGTaGAACAGCCTCCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGAPTSR*NSLQWQ
Trigger: CTGCCACTGGAGGCTGTTCAACCTGCTCGTGGGGGC...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CCA 72 bp AGCCTGAGCTCTCGGTTCTCTTCCCAGCTAGATCTGTaGCCCGGGGAGAATCTCTTCTCTCTGTTTTATCAC +
Preference number: 3 (lower is better)
Translates to: SLSSRFSSQLDL*PGENLFSLFYH
Trigger: GTGATAAAACAGAGAGAAGAGATTCTCCCCGGGCCACAGATCTAGCTGGGAAGAGAACCGAGAGCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CAA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAAGCTGTTCTCTAAGGTaGAGGGGTCACGGGATGAGG +
Preference number: 3 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPSCSLR*RGHGMR
Trigger: CCTCATCCCGTGACCCCTCAACCTTAGAGAACAGCT...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR TCA 72 bp TCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTaGGGAAGCCATCTGAGAAGCCGATGTTGGTCCACA +
Preference number: 3 (lower is better)
Translates to: SSPGNMLSGGMK*GSHLRSRCWST
Trigger: TGTGGACCAACATCGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 72 bp AGGGATGCAGATGGAGATTCAGAGGTGACAGTGATGTaGCCAAGGACACAGGTGTCAGAAGTGGGATTTCCT +
Preference number: 3 (lower is better)
Translates to: RDADGDSEVTVM*PRTQVSEVGFP
Trigger: AGGAAATCCCACTTCTGACACCTGTGTCCTTGGGCACATCACTGTCACCTCTGAATCTCCATCTGCATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 72 bp GGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATaGTGGGATAGCACAGTGAATGGAACTATGAATGAT +
Preference number: 3 (lower is better)
Translates to: GWARDCMEEGLR*WDSTVNGTMND
Trigger: ATCATTCATAGTTCCATTCACTGTGCTATCCCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 72 bp TTCATCCTGCTGATCGCTGGCAAAAGATACGTAACTTaGGGTTTCCAATGGGTCGGCCTCTGCTTTAGGGAC +
Preference number: 3 (lower is better)
Translates to: FILLIAGKRYVT*GFQWVGLCFRD
Trigger: GTCCCTAAAGCAGAGGCCGACCCATTGGAAACCTCAAGTTACGTATCTTTTGCCAGCGATCAGCAGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp CTTTCTCTGCAGGTAGTCCTGTTGACTCAACCCCCATaGAGGTGGACAATAGGCAGGACTGTTATCTCCAAA +
Preference number: 3 (lower is better)
Translates to: LSLQVVLLTQPP*RWTIGRTVISK
Trigger: TTTGGAGATAACAGTCCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAGAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR GCA 72 bp GAGTCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTaGATTGGACCTGCAAAATCATCCAGCCCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: ESLLCMGGVCDV*IGPAKSSSPVS
Trigger: AGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 72 bp CGATGTTGGTCCACAGGGCCTCGAACAGCAAGTACATaGCTTGATTTCTGCATACTCAGTGCCTGTCATACT +
Preference number: 3 (lower is better)
Translates to: RCWSTGPRTAST*LDFCILSACHT
Trigger: AGTATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCCCTGTGGACCAACATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CAA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCATGGTTTGTCAGCCTGTaGTCTTATCCCACCATGACT +
Preference number: 3 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPWFVSL*SYPTMT
Trigger: AGTCATGGTGGGATAAGACAACAGGCTGACAAACCA...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 72 bp AGCCTGTTGTCTTATCCCACCATGACTGTGGTCAGATaGAAAAACTCGGCTCTTGCTTCATCTGTTCCCTGC +
Preference number: 3 (lower is better)
Translates to: SLLSYPTMTVVR*KNSALASSVPC
Trigger: GCAGGGAACAGATGAAGCAAGAGCCGAGTTTTTTCATCTGACCACAGTCATGGTGGGATAAGACAACAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR TCA 72 bp ACACAAATGCCGTTGATCCAGGATATGCACTCAAGCTaGAATTCATGCCCACAGCCCCGCTCGTTAGTGAAT +
Preference number: 3 (lower is better)
Translates to: TQMPLIQDMHSS*NSCPQPRSLVN
Trigger: ATTCACTAACGAGCGGGGCTGTGGGCATGAATTTCAGCTTGAGTGCATATCCTGGATCAACGGCATTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR TCA 72 bp TTGGTCCACAGGGCCTCGAACAGCAAGTACATGCCTTaGTTTCTGCATACTCAGTGCCTGTCATACTCAACT +
Preference number: 3 (lower is better)
Translates to: LVHRASNSKYMP*FLHTQCLSYST
Trigger: AGTTGAGTATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCCCTGTGGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 72 bp TGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTaGTTTGTCAGCCTGTTGTCTTATCCCACCATGACT +
Preference number: 3 (lower is better)
Translates to: WDFLSHGTKWPA*FVSLLSYPTMT
Trigger: AGTCATGGTGGGATAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 72 bp TGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATaGCCAGCTTGGTTTGTCAGCCTGTTGTCTTATCCC +
Preference number: 3 (lower is better)
Translates to: CQKWDFLSHGTK*PAWFVSLLSYP
Trigger: GGGATAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 72 bp ATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATaGAGATTCAGAGGTGACAGTGATGTGCCCAAGGAC +
Preference number: 3 (lower is better)
Translates to: IQPCFFIFQGCR*RFRGDSDVPKD
Trigger: GTCCTTGGGCACATCACTGTCACCTCTGAATCTCCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 72 bp ATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTaGACACTCTGCTGGACCTTGGAGTTAGCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: IHAVECSNAYFC*TLCWTLELAQK
Trigger: CTTCTGGGCTAACTCCAAGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CCA 72 bp TGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTaGGATAGCACAGTGAATGGAACTATGAATGATTTT +
Preference number: 3 (lower is better)
Translates to: WARDCMEEGLRC*DSTVNGTMNDF
Trigger: AAAATCATTCATAGTTCCATTCACTGTGCTATCCCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CAA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTTGGTTGGTTCATAACTaGCCCCTTGGCATGAGCCTG +
Preference number: 3 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSWLVHN*PLGMSL
Trigger: CAGGCTCATGCCAAGGGGCAAGTTATGAACCAACCA...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CAA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTAGCTTCCCTAAAATGGTaGGTTCATAACTTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLASLKW*VHNLPL
Trigger: AAGGGGCAAGTTATGAACCAACCATTTTAGGGAAGC...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CAA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGTACCAAATGGCCAGCTaGGTTTGTCAGCCTGTTGTC +
Preference number: 3 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLYQMAS*VCQPVV
Trigger: GACAACAGGCTGACAAACCAAGCTGGCCATTTGGTA...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CAA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGAATGGCCAGCTTGGTTaGTCAGCCTGTTGTCTTATC +
Preference number: 3 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLNGQLG*SACCLI
Trigger: GATAAGACAACAGGCTGACAAACCAAGCTGGCCATT...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR GCA 72 bp ACAGGGCCTCGAACAGCAAGTACATGCCTTGATTTCTaGATACTCAGTGCCTGTCATACTCAACTAATATTC +
Preference number: 3 (lower is better)
Translates to: TGPRTASTCLDF*ILSACHTQLIF
Trigger: GAATATTAGTTGAGTATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CAA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACTGGTTTGTCAGCCTGTaGTCTTATCCCACCATGACT +
Preference number: 3 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDWFVSL*SYPTMT
Trigger: AGTCATGGTGGGATAAGACAACAGGCTGACAAACCA...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR-3UTR CAA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGTTCACTAAAGAAAAATaGCTAAACCAAGGTGCATGC +
Preference number: 3 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWFTKEK*LNQGAC
Trigger: GCATGCACCTTGGTTTAGCAATTTTTCTTTAGTGAA...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CAA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTTCTCCAAAGGCGGCATaGATCTTAGACACATTTCCT +
Preference number: 3 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSSPKAA*ILDTFP
Trigger: AGGAAATGTGTCTAAGATCAATGCCGCCTTTGGAGA...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR-3UTR CAA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGTCTGTGATGTTTGCATaGGACCTGCAAAATCATCCA +
Preference number: 3 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLSVMFA*DLQNHP
Trigger: TGGATGATTTTGCAGGTCCAATGCAAACATCACAGA...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGCAGGTGGGGCCCAGTCTGCAGCAGGGCCTCCAAGAGTCGAAGGGCCGACAGGTCGCCCAGGCTGGAGTaGCATGGTACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SRWGPVCSRASKSRRADRSPRLE*HGTISA
Trigger: AGCTGAGATCGTACCATGGCACTCCAGCCTGGGCGA...CCTGTCGGCCCTTCGACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp AGCAGGTGGGGCCCAGTCTGCAGCAGGGCCTCCAAGAGTCGAAGGGCCGACAGGGTGGCTGCTGGGTTCTaGGTAGGTGCTTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SRWGPVCSRASKSRRADRVAAGF*VGASSC
Trigger: GCAGGATGAAGCACCTACCCAGAACCCAGCAGCCAC...CCTGTCGGCCCTTCGACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGGTCAGCTCCTTCCTTTaGGGTGCCCTCCCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGVSSFL*GALPLR
Trigger: ACGCAGGGGGAGGGCACCCCAAAGGAAGGAGCTGAC...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGGCCAAGCCCACTGGGTaGGGCGATGCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWAKPTG*GDAGWA
Trigger: TGCCCAGCCTGCATCGCCCCACCCAGTGGGCTTGGC...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CCCAGTCTGCAGCAGGGCCTCCAAGAGTCGAAGGGCCGACAGGTCGGCCTCCTGCTACATTGCCCAGGCTaGTCTCGAACTTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSLQQGLQESKGRQVGLLLHCPG*SRTSGL
Trigger: GAGGCCAGAAGTTCGAGACCAGCCTGGGCAATGTAG...CAGGAGGCCGACCTGTCGGCCCTTCGACTCTTGGAGGCCCTGCTGCAGACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGGGCAGGTGCTGTCGATaGTGTCACTCTGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGGRCCR*CHSAGR
Trigger: TCGCCCAGCAGAGTGACATCATCGACAGCACCTGCC...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGCGCGGGTTCCCAACATaGCCATCCTCCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQRGFPT*PSSRAA
Trigger: AGCAGCTCTGGAGGATGGGCATGTTGGGAACCCGCG...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGCCCCCACGAGCAGGTTaGACAGCCTCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQPPRAG*TASSGR
Trigger: CCTGCCACTGGAGGCTGTTCAACCTGCTCGTGGGGG...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGTCAGGGAAGTGCTCATaGTCTCACCTGGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQSGKCS*SHLAGR
Trigger: TCGCCCAGCCAGGTGAGAGCATGAGCACTTCCCTGA...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGATGGGGCGATGCAGGCTaGGCAGGGCTGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGWGDAG*AGLLFP
Trigger: GGGAAAGAGCAGCCCTGCCCAGCCTGCATCGCCCCA...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp GGGTGGAAAGCAGCAGTGGGAGCTGGAAGGGAACTCTaGGCTGGCCAGCCTGCACAAAGGGGAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: GWKAAVGAGREL*AGQPAQRGAAH
Trigger: ATGTGCTGCTCCCCTTTGTGCAGGCTGGCCAGCCAAGAGTTCCCTTCCAGCTCCCACTGCTGCTTTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGGAGGATGGGAGCTCTTaGTGGGCAGACAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQEDGSS*WADKAF
Trigger: AAAGGCCTTGTCTGCCCAGCAAGAGCTCCCATCCTC...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGCCAGAGTGGGCCGTTTaGAGAGTAGCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWPEWAV*RVAGLP
Trigger: AGGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGG...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTGCCAAGCCCACTGGGTaGGGCGATGCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCAKPTG*GDAGWA
Trigger: TGCCCAGCCTGCATCGCCCCACCCAGTGGGCTTGGC...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GCAGCCAGCCTCGGTGGGGAGCCTCCAGTTCCTTCTGCAGACTGGTCAGTGCAGAAAAGTAGCCAGGCATaGTGCCCACCTGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: AASLGGEPPVPSADWSVQKSSQA*CPPASS
Trigger: ACTACTGGCAGGTGGGCACCATGCCTGGCTACTTTT...CTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCACCGAGGCTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGCCTCAGCTGTGGCAATaGCACCCACACACCAACAGC +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWPQLWQ*HPHTNS
Trigger: GCTGTTGGTGTGTGGGTGTCATTGCCACAGCTGAGG...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GTGGCCACTTCTGCAGTGGCGCTGAAGTACAACGTGGAACTCTGCTGTCCTTCCACCCCAGCTATGGTCTaGAGGCTGGTCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: VATSAVALKYNVELCCPSTPAMV*RLVHDA
Trigger: GGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGT...GGAAGGACAGCAGAGTTCCACGTTGTACTTCAGCGCCACTGCAGAAGTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGTGGGTTCTGGGTAGGTaGTTCATCCTGCTGATCGCT +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGWVLGR*FILLIA
Trigger: AGCGATCAGCAGGATGAAGCACCTACCCAGAACCCA...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGCTCCCCCTGCGTGGCTaGTGGGTTCTGGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPLPLRG*WVLGRC
Trigger: GCACCTACCCAGAACCCAGCAGCCACGCAGGGGGAG...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTGGGGTGCCCTCCCCCTaGGTGGCTGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCGVPSP*VAAGFW
Trigger: CCAGAACCCAGCAGCCACGCAGGGGGAGGGCACCCC...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GTGGCCACTTCTGCAGTGGCGCTGAAGTACAACGTGGAACTCTGCTGTCCTTCCCCAGAGTGGGCCGTTTaGAGAGTAGCTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VATSAVALKYNVELCCPSPEWAV*RVAGLP
Trigger: AGGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGG...GGAAGGACAGCAGAGTTCCACGTTGTACTTCAGCGCCACTGCAGAAGTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp AGCAGGTGGGGCCCAGTCTGCAGCAGGGCCTCCAAGAGTCGAAGGGCCGACAGGTGCTGCATTTACAAGTaGATTTGTGGGCGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SRWGPVCSRASKSRRADRCCIYK*ICGRFQ
Trigger: TTGGAAGCGCCCACAAATCCACTTGTAAATGCAGCA...CCTGTCGGCCCTTCGACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGAATCCTCCAGAGCTGCTaGCAGAAGAGGGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGILQSC*QKRAAH
Trigger: ATGGGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGAT...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGAGTCCACGATGCCCCCTaGAGAAAGTCGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGVHDAP*RKSVAN
Trigger: GTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGAC...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp AGGGTTCTTCCAGGGAAGCCTGCACTGGGGCAGAAGCCTCTACATGGGCCTGTGCTAGCTCTGAGATACTaGGGGTTCTTCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RVLPGKPALGQKPLHGPVLALRY*GFFQGS
Trigger: GCTTCCCTGGAAGAACCCTCAGTATCTCAGAGCTAG...CACAGGCCCATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTGGAAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGACCAGGAAAACAGGGTaGTCACCCCTGGCACAATAT +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGTRKTG*SPLAQY
Trigger: ATATTGTGCCAGGGGTGAGCACCCTGTTTTCCTGGT...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGGGGACTACAGGTGTGTaGCACCACACCAGGATAATT +
Preference number: 4 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQGTTGV*HHTRII
Trigger: AATTATCCTGGTGTGGTGGCACACACCTGTAGTCCC...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCACGCGTGCATCTTCCGTaGCGACCCCGCAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPRVHLP*RPRSLR
Trigger: GCGCAGGCTGCGGGGTCGGCACGGAAGATGCACGCG...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618742.3
CDS-3UTR CCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGTGCAGCCAGCCTCGGTaGGGAGCCTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPCSQPR*GASSSF
Trigger: GAAGGAACTGGAGGCTCCCCACCGAGGCTGGCTGCA...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGATGATGTCACTCTGCTaGGCGACAAGCCAGAATGTC +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGMMSLC*ATSQNV
Trigger: GACATTCTGGCTTGTCGCCCAGCAGAGTGACATCAT...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGACAGGGAAGCCTGCACTaGGGCAGAAGCCTCTACATG +
Preference number: 4 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGQGSLH*GRSLYM
Trigger: CATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTG...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGCTGGAAGGGAACTCTTaGCTGGCCAGCCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWLEGNS*LASLHK
Trigger: TTTGTGCAGGCTGGCCAGCCAAGAGTTCCCTTCCAG...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTGGCAGGTGCTGTCGATaGTGTCACTCTGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCGRCCR*CHSAGR
Trigger: TCGCCCAGCAGAGTGACATCATCGACAGCACCTGCC...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GTGGCCACTTCTGCAGTGGCGCTGAAGTACAACGTGGAACTCTGCTGTCCTTCCGGCTGTCCCAGAAGCTaGGGTAGCAGAGGATGTACA +
Preference number: 4 (lower is better)
Translates to: VATSAVALKYNVELCCPSGCPRS*GSRGCT
Trigger: TGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCC...GGAAGGACAGCAGAGTTCCACGTTGTACTTCAGCGCCACTGCAGAAGTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTCGCGGGTTCCCAACATaGCCATCCTCCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCRGFPT*PSSRAA
Trigger: AGCAGCTCTGGAGGATGGGCATGTTGGGAACCCGCG...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGACCCCAGCTATGGTCTaGAGGCTGGTCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPTPAMV*RLVHDA
Trigger: GGCATCGTGGACCAGCCTGCAGACCATAGCTGGGGT...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGAGTAGCCAGGCATGGTaGCCACCTGCCAGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMSSQAW*PPASSP
Trigger: GGGACTACTGGCAGGTGGGCACCATGCCTGGCTACT...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGGAAGAGGGCGGCCCATaGCATGGCCAGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLEEGGP*HGQVAW
Trigger: CCAGGCCACCTGGCCATGCCATGGGCCGCCCTCTTC...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGTTGAACAGCCTCCAGTaGCAGGTGCTGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWLNSLQ*QVLSMM
Trigger: CATCATCGACAGCACCTGCCACTGGAGGCTGTTCAA...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGCCTGCCAGATGTCTGTaGATTTTGGATGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWPARCL*ILDAAG
Trigger: GCCTGCTGCATCCAAAATCCACAGACATCTGGCAGG...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGAAGCCTCCTTCCAGAGTaGGCCGTTTGCAGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGSLLPE*AVCRVA
Trigger: AGCTACTCTGCAAACGGCCCACTCTGGAAGGAGGCT...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AGGGTTCTTCCAGGGAAGCCTGCACTGGGGCAGAAGCCTCTACATGGGCCTGTGCAGCTGCAGTCCGTTTaGATAGACTCAGACTTAGGG +
Preference number: 4 (lower is better)
Translates to: RVLPGKPALGQKPLHGPVQLQSV*IDSDLG
Trigger: CCCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTG...CACAGGCCCATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTGGAAGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 72 bp CTGGGCAGACAAGGCCTTTCTCTGCAGGTAGTCCTGTaGACTCAACCCCCATGCAGGTGGACAATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGRQGLSLQVVL*TQPPCRWTIGR
Trigger: CCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAGAGAAAGGCCTTGTCTGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCTTCTCTCTGTTTTATCACCTCCTGCAATGCCACAGGACTTCCTTAGGCAGCCCCCACGAGCAGGTTaGACAGCCTCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLSVLSPPAMPQDFLRQPPRAG*TASSGR
Trigger: CCTGCCACTGGAGGCTGTTCAACCTGCTCGTGGGGG...CTGCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACAGAGAGAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGAAAAGATACGTAACTTaGGGTTTCCAATGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGKRYVT*GFQWVG
Trigger: GCCGACCCATTGGAAACCTCAAGTTACGTATCTTTT...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTAGTTGGAGACCAGCCTaGGCCACCTGGCAAGAACCT +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCSWRPA*ATWQEP
Trigger: AGGTTCTTGCCAGGTGGCTCAGGCTGGTCTCCAACT...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTCTGGAGGCATGAAGTaGGGAAGCCATCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQSGGMK*GSHLRS
Trigger: GCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGA...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTAGGTGGGGCCCAGTCTaGAGCAGGGCCTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCRWGPV*SRASKS
Trigger: ACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCT...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATACCCATCCTCCAGAGCTaGTGGCAGAAGAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GLEQQVHALISAYSVPVIPILQS*WQKRAA
Trigger: GGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGATGGG...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGGAGGTGACAGTGATGTaGCCAAGGACACAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQEVTVM*PRTQVS
Trigger: TGACACCTGTGTCCTTGGGCACATCACTGTCACCTC...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGGTTCTTCCAGGGAAGCCTGCACTGGGGCAGAAGCCTCTACATGGGCCTGTGGAGGAAGGACTGAGATaGTGGGATAGCACAGTGAAT +
Preference number: 4 (lower is better)
Translates to: RVLPGKPALGQKPLHGPVEEGLR*WDSTVN
Trigger: ATTCACTGTGCTATCCCAGCATCTCAGTCCTTCCTC...CACAGGCCCATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTGGAAGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGTCTAACGCCTACTTTTaGTGGACACTCTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWSNAYF*WTLCWT
Trigger: GGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGA...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGGGCTGTCCCAGAAGCTaGGGTAGCAGAGGATGTACA +
Preference number: 4 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPGCPRS*GSRGCT
Trigger: TGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCC...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGAGGTTGAGGCTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPRLRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCTCACTGCAGCCTCAACCT...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGAGGTGGGGCCCAGTCTaGAGCAGGGCCTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLRWGPV*SRASKS
Trigger: ACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCT...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGCCCATCCTCCAGAGCTaGTGGCAGAAGAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWPILQS*WQKRAA
Trigger: GGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGATGGG...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATCTCCCCCTGCGTGGCTaGTGGGTTCTGGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDLPLRG*WVLGRC
Trigger: GCACCTACCCAGAACCCAGCAGCCACGCAGGGGGAG...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGATTTTGCTGGACACTCTaGTGGACCTTGGAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGFCWTL*WTLELA
Trigger: GGCTAACTCCAAGGTCCAGCAGAGTGTCCAGCAAAA...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGACATGCCTTGATTTCTaGATACTCAGTGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGTCLDF*ILSACH
Trigger: ATGACAGGCACTGAGTATGCAGAAATCAAGGCATGT...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTCCCAGCTAGATCTGTaGCCCGGGGAGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCSQLDL*PGENLF
Trigger: GAAGAGATTCTCCCCGGGCCACAGATCTAGCTGGGA...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGGATGGGAGCTCTTGCTaGGCAGACAAGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQEDGSSC*ADKAFL
Trigger: GAGAAAGGCCTTGTCTGCCCAGCAAGAGCTCCCATC...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGCTGGACACTCTGCTaGACCTTGGAGTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCCWTLC*TLELAQ
Trigger: CTGGGCTAACTCCAAGGTCCAGCAGAGTGTCCAGCA...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGCTGAGAAGCCGATGTTaGTCCACAGGGCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQELRSRC*STGPRT
Trigger: TGTTCGAGGCCCTGTGGACCAACATCGGCTTCTCAG...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp CTCTTGCTTCATCTGTTCCCTGCAGCTGCAGTCCGTTaGGATAGACTCAGACTTAGGGGTGGACGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLLHLFPAAAVR*DRLRLRGGREA
Trigger: TGCCTCACGTCCACCCCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTGCAGGGAACAGATGAAGCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 72 bp AGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGATGTaGGTCCACAGGGCCTCGAACAGCAAGTACATGCCT +
Preference number: 4 (lower is better)
Translates to: RHEVRKPSEKPM*VHRASNSKYMP
Trigger: AGGCATGTACTTGCTGTTCGAGGCCCTGTGGACCAACATCGGCTTCTCAGATGGCTTCCTCACTTCATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGAAAAGATACGTAACTTaGGGTTTCCAATGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWKRYVT*GFQWVG
Trigger: GCCGACCCATTGGAAACCTCAAGTTACGTATCTTTT...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCCTCAGCTGTGGCAATaGCACCCACACACCAACAGC +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCPQLWQ*HPHTNS
Trigger: GCTGTTGGTGTGTGGGTGTCATTGCCACAGCTGAGG...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGAGCAAGTACATGCCTTaGTTTCTGCATACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWSKYMP*FLHTQC
Trigger: GCACTGAGTATGCAGAAATCAAGGCATGTACTTGCT...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTAGTGAGGAAGCCATCTaGGAAGCCGATGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCSEEAI*EADVGP
Trigger: TGGACCAACATCGGCTTCTCAGATGGCTTCCTCACT...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTGAGCAATGCCCTGGATaGCCGTCTGCTCGGAACCAC +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPEQCPG*PSARNH
Trigger: GTGGTTCCGAGCAGACGGGCATCCAGGGCATTGCTC...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGATTCCTTAGGCAGCCCTaGCAGATGTCTGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGFLRQP*QMSVDF
Trigger: AAAATCCACAGACATCTGGCAGGGCTGCCTAAGGAA...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGTGTTTTATCACCTCCTaGAATGCCACAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWCFITS*NATGLP
Trigger: AGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACA...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTGGGGTGCCCTCCCCCTaGGTGGCTGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSGVPSP*VAAGFW
Trigger: CCAGAACCCAGCAGCCACGCAGGGGGAGGGCACCCC...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCCTTCCCCTCCTCTCTaGTGCCCACCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWPSPPL*CPPVPF
Trigger: GAAGGGGACAGGTGGGCAGCAGAGAGGAGGGGAAGG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGGGATGTGGCCACTTCTaGAGTGGCGCTGAAGTACAA +
Preference number: 4 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMGCGHF*SGAEVQ
Trigger: TTGTACTTCAGCGCCACTGCAGAAGTGGCCACATCC...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTGAGGTGACAGTGATGTaGCCAAGGACACAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCEVTVM*PRTQVS
Trigger: TGACACCTGTGTCCTTGGGCACATCACTGTCACCTC...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTCTTGGCTGGCCAGCCTaGACAAAGGGGAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFALGWPA*TKGSST
Trigger: TGTGCTGCTCCCCTTTGTGCAGGCTGGCCAGCCAAG...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTCTGCAGACTGGTCAGTaGAGCGTCCCAGTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPLQTGQ*SVPVPL
Trigger: AAGCGGCACTGGGACGCTGCACTGACCAGTCTGCAG...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618742.3
CDS-3UTR CCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCACATGGCATGGCCAGGTaGCCTGGCTTCATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSHGMAR*PGFMKP
Trigger: GGGCTTCATGAAGCCAGGCCACCTGGCCATGCCATG...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCACTATGGTCTGCAGGCTaGTCCACGATGCCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPLWSAG*STMPPG
Trigger: TCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAG...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTGGGCGCCAAGCCCACTaGGTGGGGCGATGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSGRQAH*VGRCRL
Trigger: CAGCCTGCATCGCCCCACCCAGTGGGCTTGGCGCCC...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACGGGCGCCAAGCCCACTaGGTGGGGCGATGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDGRQAH*VGRCRL
Trigger: CAGCCTGCATCGCCCCACCCAGTGGGCTTGGCGCCC...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAAAGGGAACTCTTGGCTaGCCAGCCTGCACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPKGTLG*PACTKG
Trigger: CCCCTTTGTGCAGGCTGGCCAGCCAAGAGTTCCCTT...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAAGCAGCAGTGGGAGCTaGAAGGGAACTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPSSSGS*KGTLGW
Trigger: CCAGCCAAGAGTTCCCTTCCAGCTCCCACTGCTGCT...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGCACATTGAATGGAAGTaGGAACAAAGCTTGGACATA +
Preference number: 4 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQHIEWK*EQSLDI
Trigger: TATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTG...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAATGCTCTCACCTGGCTaGGCGAGAGACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPMLSPG*ARDCME
Trigger: CTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGTGAGGACTCAGGGAAGTGCTCATGCTCTCACCTGGCTGGGGTAATAAATTACCAGTaGGACACTGCCAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: MGRAGEDSGKCSCSHLAGVINYQ*DTANQK
Trigger: TTTCTGATTGGCAGTGTCTCACTGGTAATTTATTAC...CCCAGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTCACCAGCCCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTACCCTGGATGCCCGTCTaGTCGGAACCACAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLPWMPV*SEPQVA
Trigger: AGCTACCTGTGGTTCCGAGCAGACGGGCATCCAGGG...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGCAGGCTGGTCCACGATaGCCCCTGGAGAAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVQAGPR*PLEKVG
Trigger: ACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTG...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTATCACCTCCTGCAATaGCACAGGACTTCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCYHLLQ*HRTSLG
Trigger: GCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATA...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGCAATGGGTCGGCCTCTaGTTTAGGGACACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQEQWVGL*FRDTFK
Trigger: TTTGAAGGTGTCCCTAAAGCAGAGGCCGACCCATTG...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGCCTTCCCCTCCTCTCTaGTGCCCACCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMPSPPL*CPPVPF
Trigger: GAAGGGGACAGGTGGGCAGCAGAGAGGAGGGGAAGG...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGAGAAAAATACATTTATaGAGCTGGCCAGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWRKIHL*SWPGGC
Trigger: GCATCCTCCTGGCCAGCTGCATAAATGTATTTTTCT...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGCTTGGCTGGCCAGCCTaGACAAAGGGGAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVLGWPA*TKGSST
Trigger: TGTGCTGCTCCCCTTTGTGCAGGCTGGCCAGCCAAG...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTTCAGGGAAGTGCTCATaGTCTCACCTGGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPSGKCS*SHLAGR
Trigger: TCGCCCAGCCAGGTGAGAGCATGAGCACTTCCCTGA...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGCAAGGAGCAATGCCCTaGATGCCCGTCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLQGAMP*MPVCSE
Trigger: TTCCGAGCAGACGGGCATCCAGGGCATTGCTCCTTG...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCATGGCATGGCCAGGTaGCCTGGCTTCATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWHGMAR*PGFMKP
Trigger: GGGCTTCATGAAGCCAGGCCACCTGGCCATGCCATG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGATCCTCCAGAGCTGCTaGCAGAAGAGGGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVILQSC*QKRAAH
Trigger: ATGGGCCGCCCTCTTCTGCCAGCAGCTCTGGAGGAT...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTAACAGGACCCCAGCTATaGTCTGCAGGCTGGTCCACG +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLTGPQL*SAGWST
Trigger: CGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGT...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGTGGGGCGATGCAGGCTaGGCAGGGCTGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLWGDAG*AGLLFP
Trigger: GGGAAAGAGCAGCCCTGCCCAGCCTGCATCGCCCCA...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAATGCTCTCACCTGGCTaGGCGAGAGACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPMLSPG*ARDCME
Trigger: CTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGCTCATGCTCTCACCTaGCTGGGCGAGAGACTGCAT +
Preference number: 4 (lower is better)
Translates to: RCQKWDFLSHGTKWPAWFAHALT*LGERLH
Trigger: ATGCAGTCTCTCGCCCAGCCAGGTGAGAGCATGAGC...AAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTTGCTGGACACTCTGCTaGACCTTGGAGTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCCWTLC*TLELAQ
Trigger: CTGGGCTAACTCCAAGGTCCAGCAGAGTGTCCAGCA...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGAACGCCTACTTTTGCTaGACACTCTGCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQENAYFC*TLCWTL
Trigger: CAAGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTT...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGAAGCCGTCCTGTGGTaGAGTAGTAAGCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFAEAVLW*SSKPRC
Trigger: ACACCGTGGCTTACTACTTCACCACAGGACGGCTTC...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCAGCCAGTGGTGATGACTaGGGAAAGAGTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSASGDD*GKSPPQ
Trigger: CTGTGGAGGACTCTTTCCTCAGTCATCACCACTGGC...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCAGCTGCCTTCTTGTTGTaGGGATGTGGCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSAAFLL*GCGHFC
Trigger: GCAGAAGTGGCCACATCCTCACAACAAGAAGGCAGC...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCACTAGCTCTGAGATACTaGGGGTTCTTCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPLALRY*GFFQGS
Trigger: GCTTCCCTGGAAGAACCCTCAGTATCTCAGAGCTAG...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTCCAACAGCTGCATGGTaGCTTAGCTCCCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFAPTAAW*LSSLLG
Trigger: GCCCAAAAGGGAGCTAAGTCACCATGCAGCTGTTGG...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGTCTTATCCCACCATaGCTGTGGTCAGATGAAAAA +
Preference number: 4 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQCLIPP*LWSDEK
Trigger: TTTTTCATCTGACCACAGTCATGGTGGGATAAGACA...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTGCATGGAGGAAGGACTaGGATGCTGGGATAGCACAG +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPAWRKD*DAGIAQ
Trigger: CTGTGCTATCCCAGCATCTCAGTCCTTCCTCCATGC...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGGCCTCCAGTTCCTTCTaGAGACTGGTCAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVASSSF*RLVSAA
Trigger: CGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGC...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGGAGGATGGGAGCTCTTaGTGGGCAGACAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLEDGSS*WADKAF
Trigger: AAAGGCCTTGTCTGCCCAGCAAGAGCTCCCATCCTC...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTTACAACGTGGAACTCTaGTGTCCTTCCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCYNVEL*CPSPPL
Trigger: GAGAGGAGGGGAAGGACAGCAGAGTTCCACGTTGTA...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTGGATGTGGCCACTTCTaGAGTGGCGCTGAAGTACAA +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCGCGHF*SGAEVQ
Trigger: TTGTACTTCAGCGCCACTGCAGAAGTGGCCACATCC...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATTCGCCCAGGCTGGAGTaGCATGGTACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDSPRLE*HGTISA
Trigger: AGCTGAGATCGTACCATGGCACTCCAGCCTGGGCGA...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTGAGGAAGGACTGAGATaGTGGGATAGCACAGTGAAT +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCEEGLR*WDSTVN
Trigger: ATTCACTGTGCTATCCCAGCATCTCAGTCCTTCCTC...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTGAGGACTCAGGGAAGTaGTCATGCTCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPEDSGK*SCSHLA
Trigger: AGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTC...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATACATGGCCAGGTGGCCTaGCTTCATGAAGCCCATGAA +
Preference number: 4 (lower is better)
Translates to: GLEQQVHALISAYSVPVIHGQVA*LHEAHE
Trigger: TTCATGGGCTTCATGAAGCCAGGCCACCTGGCCATG...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCGAAGAGGGCGGCCCATaGCATGGCCAGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSEEGGP*HGQVAW
Trigger: CCAGGCCACCTGGCCATGCCATGGGCCGCCCTCTTC...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCCTATGGTCTGCAGGCTaGTCCACGATGCCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PYFYPITQMPLIQDMHSSLWSAG*STMPPG
Trigger: TCCAGGGGGCATCGTGGACCAGCCTGCAGACCATAG...GCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGGGGGCTTCCCTAAAATaGTTGGTTCATAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMGASLK*LVHNLP
Trigger: GGGCAAGTTATGAACCAACCATTTTAGGGAAGCCCC...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGGTGGCTGCTGGGTTCTaGGTAGGTGCTTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWVAAGF*VGASSC
Trigger: GCAGGATGAAGCACCTACCCAGAACCCAGCAGCCAC...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTCTGGAAGGGAACTCTTaGCTGGCCAGCCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFALEGNS*LASLHK
Trigger: TTTGTGCAGGCTGGCCAGCCAAGAGTTCCCTTCCAG...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGAGCAGCAGTGGGAGCTaGAAGGGAACTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWSSSGS*KGTLGW
Trigger: CCAGCCAAGAGTTCCCTTCCAGCTCCCACTGCTGCT...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTAAAAGTAGCCAGGCATaGTGCCCACCTGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCKSSQA*CPPASS
Trigger: ACTACTGGCAGGTGGGCACCATGCCTGGCTACTTTT...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGGCTCATGCTCTCACCTaGCTGGGCGAGAGACTGCAT +
Preference number: 4 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWAHALT*LGERLH
Trigger: ATGCAGTCTCTCGCCCAGCCAGGTGAGAGCATGAGC...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTCTGAGAAGCCGATGTTaGTCCACAGGGCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPLRSRC*STGPRT
Trigger: TGTTCGAGGCCCTGTGGACCAACATCGGCTTCTCAG...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGGAAGCCGTCCTGTGGTaGAGTAGTAAGCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVEAVLW*SSKPRC
Trigger: ACACCGTGGCTTACTACTTCACCACAGGACGGCTTC...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCTTCTCTCTGTTTTATCACCTCCTGCAATGCCACAGGACTTCCTTAGGCAGGGTGCTTCATCCTGCTaGTCGCTGGCAAAAGATACG +
Preference number: 4 (lower is better)
Translates to: SLLSVLSPPAMPQDFLRQGASSC*SLAKDT
Trigger: CGTATCTTTTGCCAGCGATCAGCAGGATGAAGCACC...CTGCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACAGAGAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATGCTGCCTTCTTGTTGTaGGGATGTGGCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDAAFLL*GCGHFC
Trigger: GCAGAAGTGGCCACATCCTCACAACAAGAAGGCAGC...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCCAACAGCTGCATGGTaGCTTAGCTCCCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWPTAAW*LSSLLG
Trigger: GCCCAAAAGGGAGCTAAGTCACCATGCAGCTGTTGG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTATGACTGTGGTCAGATaGAAAAACTCGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCMTVVR*KNSALA
Trigger: AGCAAGAGCCGAGTTTTTTCATCTGACCACAGTCAT...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATAGGTTGAGGCTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDRLRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCTCACTGCAGCCTCAACCT...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGAGTTGGAGACCAGCCTaGGCCACCTGGCAAGAACCT +
Preference number: 4 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMSWRPA*ATWQEP
Trigger: AGGTTCTTGCCAGGTGGCTCAGGCTGGTCTCCAACT...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGAGCAAGTACATGCCTTaGTTTCTGCATACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQESKYMP*FLHTQC
Trigger: GCACTGAGTATGCAGAAATCAAGGCATGTACTTGCT...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTACTGCAGACTGGTCAGTaGAGCGTCCCAGTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLLQTGQ*SVPVPL
Trigger: TAAAGGCACTGGGACGCTGCACTGACCAGTCTGCAG...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGAGCCTCCAGTTCCTTCTaGAGACTGGTCAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGASSSF*RLVSAA
Trigger: CGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGC...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCATCGATGATGTCACTCTaGTGGGCGACAAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPSMMSL*WATSQN
Trigger: ATTCTGGCTTGTCGCCCAGCAGAGTGACATCATCGA...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAGCTTCATCTGTTCCCTaGAGCTGCAGTCCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPASSVP*SCSPFG
Trigger: TCCAAACGGACTGCAGCTGCAGGGAACAGATGAAGC...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGACAAGGAGCAATGCCCTaGATGCCCGTCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGQGAMP*MPVCSE
Trigger: TTCCGAGCAGACGGGCATCCAGGGCATTGCTCCTTG...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGTCCCAGCTAGATCTGTaGCCCGGGGAGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVSQLDL*PGENLF
Trigger: GAAGAGATTCTCCCCGGGCCACAGATCTAGCTGGGA...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGAGCCTCCTTCCAGAGTaGGCCGTTTGCAGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVSLLPE*AVCRVA
Trigger: AGCTACTCTGCAAACGGCCCACTCTGGAAGGAGGCT...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGTTTCAGGGATGCAGATaGAGATTCAGAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQEFQGCR*RFRGDS
Trigger: ACTGTCACCTCTGAATCTCCATCTGCATCCCTGAAA...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGAAGGGAACTCTTGGCTaGCCAGCCTGCACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMKGTLG*PACTKG
Trigger: CCCCTTTGTGCAGGCTGGCCAGCCAAGAGTTCCCTT...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGTCTGCATCCCCGATTaGCTTATGTGGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMVCIPD*LMWLAR
Trigger: CCTGGCCAGCCACATAAGCCAATCGGGGATGCAGAC...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATCTACATTGCCCAGGCTaGTCTCGAACTTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDLHCPG*SRTSGL
Trigger: GAGGCCAGAAGTTCGAGACCAGCCTGGGCAATGTAG...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp GTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTaGGTTTGTCAGCCTGTTGTCTTATCCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: VGFPFSRYQMAS*VCQPVVLSHHD
Trigger: GTCATGGTGGGATAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp ATGCCCACAGCCCCGCTCGTTAGTGAATTCATGCTGTaGAATGCTCTAACGCCTACTTTTGCTGGACACTCT +
Preference number: 4 (lower is better)
Translates to: MPTAPLVSEFML*NALTPTFAGHS
Trigger: AGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGCTGTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp GTTGGTCCACAGGGCCTCGAACAGCAAGTACATGCCTaGATTTCTGCATACTCAGTGCCTGTCATACTCAAC +
Preference number: 4 (lower is better)
Translates to: VGPQGLEQQVHA*ISAYSVPVILN
Trigger: GTTGAGTATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCCCTGTGGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATAAGAAAAACATATGTCTaGAGCAGCAGGTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLEQQVHALISAYSVPVIRKTYV*SSRWGP
Trigger: TGGGCCCCACCTGCTGCTTCAGACATATGTTTTTCT...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGCTGGCACAATATCTGTaGAGTCTGAGGCTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPLAQYL*SLRLEK
Trigger: TTTTTCTAGCCTCAGACTTCACAGATATTGTGCCAG...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGGGTAGCAGACAATTTTaGCTGGAATCTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQEGSRQF*LESLSP
Trigger: AGGAGAAAGAGATTCCAGTCAAAATTGTCTGCTACC...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGGATAGTGTCTCACATTaGATGGAAGTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMDSVSH*MEVGTK
Trigger: CTTTGTTCCCACTTCCATTCAATGTGAGACACTATC...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGCCAAGAGGAGATGTTTaGGTGGAGTCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLPRGDV*VESWRT
Trigger: TGTCCTCCAAGACTCCACTCAAACATCTCCTCTTGG...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCTTCTCTCTGTTTTATCACCTCCTGCAATGCCACAGGACTTCCTTAGGCAGCCAAGAGGAGATGTTTaGGTGGAGTCTTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SLLSVLSPPAMPQDFLRQPRGDV*VESWRT
Trigger: TGTCCTCCAAGACTCCACTCAAACATCTCCTCTTGG...CTGCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACAGAGAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGAGTGAGGAAGCCATCTaGGAAGCCGATGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWSEEAI*EADVGP
Trigger: TGGACCAACATCGGCTTCTCAGATGGCTTCCTCACT...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTATCTGGAGGCATGAAGTaGGGAAGCCATCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLSGGMK*GSHLRS
Trigger: GCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGA...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACCCCTGGATGCCCGTCTaGTCGGAACCACAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDPWMPV*SEPQVA
Trigger: AGCTACCTGTGGTTCCGAGCAGACGGGCATCCAGGG...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTGAGCAATGCCCTGGATaGCCGTCTGCTCGGAACCAC +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSEQCPG*PSARNH
Trigger: GTGGTTCCGAGCAGACGGGCATCCAGGGCATTGCTC...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTACCAGGAAAACAGGGTaGTCACCCCTGGCACAATAT +
Preference number: 4 (lower is better)
Translates to: RCQKWDFLSHGTKWPAWFTRKTG*SPLAQY
Trigger: ATATTGTGCCAGGGGTGAGCACCCTGTTTTCCTGGT...AAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTCAGCCAGTGGGCACCTaGAACCACAAAAACCCAAAA +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPQPVGT*NHKNPK
Trigger: TTTTGGGTTTTTGTGGTTGCAGGTGCCCACTGGCTG...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTCAGGCTGGTCCACGATaGCCCCTGGAGAAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSQAGPR*PLEKVG
Trigger: ACCGACTTTCTCCAGGGGGCATCGTGGACCAGCCTG...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTTATCACCTCCTGCAATaGCACAGGACTTCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: RCQKWDFLSHGTKWPAWFYHLLQ*HRTSLG
Trigger: GCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATA...AAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGTTGACTCAACCCCCATaGAGGTGGACAATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVLTQPP*RWTIGR
Trigger: CCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAA...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATTTGACTCAACCCCCATaGAGGTGGACAATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDLTQPP*RWTIGR
Trigger: CCTGCCTATTGTCCACCTGCATGGGGGTTGAGTCAA...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTATACAACGTGGAACTCTaGTGTCCTTCCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLYNVEL*CPSPPL
Trigger: GAGAGGAGGGGAAGGACAGCAGAGTTCCACGTTGTA...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTAGTAGCCAGGCATGGTaGCCACCTGCCAGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSSSQAW*PPASSP
Trigger: GGGACTACTGGCAGGTGGGCACCATGCCTGGCTACT...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AAGTTTGTAGCCACTTGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCAGGAGCGAACAGCAAGTACATaGCTTGATTTCTGCATACTC +
Preference number: 4 (lower is better)
Translates to: KFVATCLHPRLAYVAGQERTAST*LDFCIL
Trigger: GAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCG...CTCCTGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCGTTCCTTCTGCAGACTaGTCAGTGCAGCGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PYFYPITQMPLIQDMHSSVPSAD*SVQRPS
Trigger: ACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAAC...GCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCAGGGTGCTCACCCCTaGCACAATATCTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWQGAHP*HNICEV
Trigger: GACTTCACAGATATTGTGCCAGGGGTGAGCACCCTG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGCAGGGTGCTCACCCCTaGCACAATATCTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWQGAHP*HNICEV
Trigger: GACTTCACAGATATTGTGCCAGGGGTGAGCACCCTG...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGACATGGCCAGGTGGCCTaGCTTCATGAAGCCCATGAA +
Preference number: 4 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGHGQVA*LHEAHE
Trigger: TTCATGGGCTTCATGAAGCCAGGCCACCTGGCCATG...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAATGATGTCACTCTGCTaGGCGACAAGCCAGAATGTC +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPMMSLC*ATSQNV
Trigger: GACATTCTGGCTTGTCGCCCAGCAGAGTGACATCAT...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATTTGAACAGCCTCCAGTaGCAGGTGCTGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDLNSLQ*QVLSMM
Trigger: CATCATCGACAGCACCTGCCACTGGAGGCTGTTCAA...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTACCTGCCAGATGTCTGTaGATTTTGGATGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLPARCL*ILDAAG
Trigger: GCCTGCTGCATCCAAAATCCACAGACATCTGGCAGG...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATGTCAGCTCCTTCCTTTaGGGTGCCCTCCCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LVITSTQALPTPRKHANYVSSFL*GALPLR
Trigger: ACGCAGGGGGAGGGCACCCCAAAGGAAGGAGCTGAC...ATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAAGAGTGCGAGAGGAATaGACGTTTCCTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPRVREE*TFPPFF
Trigger: AAAGAAGGGAGGAAACGTCCATTCCTCTCGCACTCT...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGAAGAACACTTTAGAGTaGAGGAGTCAGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMKNTLE*RSQREG
Trigger: TCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTT...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTGAAGGACTGAGATGCTaGGATAGCACAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: GISFLTVPNGQLGLSACCEGLRC*DSTVNG
Trigger: TCCATTCACTGTGCTATCCCAGCATCTCAGTCCTTC...ACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAAACGCCTACTTTTGCTaGACACTCTGCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPNAYFC*TLCWTL
Trigger: CAAGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTT...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp CTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATaGGACCTGCAAAATCATCCAGCCCTGTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSYAWVGSVMFA*DLQNHPALFLH
Trigger: ATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGGTGCTTCATCCTGCTaGTCGCTGGCAAAAGATACG +
Preference number: 4 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMGASSC*SLAKDT
Trigger: CGTATCTTTTGCCAGCGATCAGCAGGATGAAGCACC...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp CCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCCTTCTGCAGTGGCGCTaGAGTACAACGTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: PYFYPITQMPLIQDMHSSLLQWR*STTWNS
Trigger: AGAGTTCCACGTTGTACTTCAGCGCCACTGCAGAAG...GCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGTCGATGATGTCACTCTaGTGGGCGACAAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWSMMSL*WATSQN
Trigger: ATTCTGGCTTGTCGCCCAGCAGAGTGACATCATCGA...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTACAATGGGTCGGCCTCTaGTTTAGGGACACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLQWVGL*FRDTFK
Trigger: TTTGAAGGTGTCCCTAAAGCAGAGGCCGACCCATTG...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGGGGACTACAGGTGTGTaGCACCACACCAGGATAATT +
Preference number: 4 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWGTTGV*HHTRII
Trigger: AATTATCCTGGTGTGGTGGCACACACCTGTAGTCCC...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTTGCATTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGGTTCCTTCTGCAGACTaGTCAGTGCAGCGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FALDLQNHPALFLHFSGMVPSAD*SVQRPS
Trigger: ACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAAC...CATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTTGCAGCCAGCCTCGGTaGGGAGCCTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSFPGYSRARKFEKNEQICSQPR*GASSSF
Trigger: GAAGGAACTGGAGGCTCCCCACCGAGGCTGGCTGCA...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATGTCCACGATGCCCCCTaGAGAAAGTCGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LVITSTQALPTPRKHANYVHDAP*RKSVAN
Trigger: GTTGGCCACCGACTTTCTCCAGGGGGCATCGTGGAC...ATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCACAGGACCCCAGCTATaGTCTGCAGGCTGGTCCACG +
Preference number: 4 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSTGPQL*SAGWST
Trigger: CGTGGACCAGCCTGCAGACCATAGCTGGGGTCCTGT...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTTGCATTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGGATGGGAGCTCTTGCTaGGCAGACAAGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: FALDLQNHPALFLHFSGMDGSSC*ADKAFL
Trigger: GAGAAAGGCCTTGTCTGCCCAGCAAGAGCTCCCATC...CATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAACAGGGAAGCCTGCACTaGGGCAGAAGCCTCTACATG +
Preference number: 4 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKQGSLH*GRSLYM
Trigger: CATGTAGAGGCTTCTGCCCCAGTGCAGGCTTCCCTG...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACTTAGCTCCCTTTTaGGCTCCAGCGGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLDLAPF*APAAPL
Trigger: TAGAGGAGCCGCTGGAGCCCAAAAGGGAGCTAAGTC...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCAGCTGCAGTCCGTTTaGATAGACTCAGACTTAGGG +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWQLQSV*IDSDLG
Trigger: CCCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTACCAAATGGCCAGCTTaGTTTGTCAGCCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFATKWPA*FVSLLS
Trigger: AGACAACAGGCTGACAAACCAAGCTGGCCATTTGGT...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCTTCTCTCTGTTTTATCACCTCCTGCAATGCCACAGGACTTCCTTAGGCAGACCAAATGGCCAGCTTaGTTTGTCAGCCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLLSVLSPPAMPQDFLRQTKWPA*FVSLLS
Trigger: AGACAACAGGCTGACAAACCAAGCTGGCCATTTGGT...CTGCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACAGAGAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTCACAGGTGTCAGAAGTaGGATTTCCTTTCTCACGGT +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFAHRCQK*DFLSHG
Trigger: ACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTG...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCACACAGGTGTCAGAAGTaGGATTTCCTTTCTCACGGT +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSHRCQK*DFLSHG
Trigger: ACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTG...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAAGTCTCTCCTATGCATaGGTGGGGTCTGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPSLSYA*VGSVMF
Trigger: AAACATCACAGACCCCACCCATGCATAGGAGAGACT...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATCTGAGAAGCCGTTCCTCCCTTCTTTTTaGATGGGCTTAAATCATGGA +
Preference number: 4 (lower is better)
Translates to: TGQYAFWRHEVRKPSEKPFLPSF*MGLNHG
Trigger: TCCATGATTTAAGCCCATCCAAAAAGAAGGGAGGAA...CGGCTTCTCAGATGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCCTGGTCTCGAACTTCTaGCCTCAAGTGATCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PYFYPITQMPLIQDMHSSLVSNF*PQVIFP
Trigger: CGGGAAGATCACTTGAGGCCAGAAGTTCGAGACCAG...GCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGACTGGTCTCGAACTTCTaGCCTCAAGTGATCTTCCCG +
Preference number: 4 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGLVSNF*PQVIFP
Trigger: CGGGAAGATCACTTGAGGCCAGAAGTTCGAGACCAG...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR TCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACGCCAGTGGTGATGACTaGGGAAAGAGTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDASGDD*GKSPPQ
Trigger: CTGTGGAGGACTCTTTCCTCAGTCATCACCACTGGC...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTGCATGGAGGAAGGACTaGGATGCTGGGATAGCACAG +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSAWRKD*DAGIAQ
Trigger: CTGTGCTATCCCAGCATCTCAGTCCTTCCTCCATGC...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCATGTTTGCATTGGACCTaGAAAATCATCCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSCLHWT*KIIQPC
Trigger: ACAGGGCTGGATGATTTTGCAGGTCCAATGCAAACA...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATGCACTCAAGCGCTCACTGCAACCTCTaGCTCCCAGTTCAACTGATT +
Preference number: 4 (lower is better)
Translates to: PYFYPITQMPLIQDMHSSAHCNL*LPVQLI
Trigger: AATCAGTTGAACTGGGAGGCAGAGGTTGCAGTGAGC...GCTTGAGTGCATATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGAGCTCACTGCAACCTCTaGCTCCCAGTTCAACTGATT +
Preference number: 4 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGAHCNL*LPVQLI
Trigger: AATCAGTTGAACTGGGAGGCAGAGGTTGCAGTGAGC...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAAGAGGACTCAGGGAAGTaGTCATGCTCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKEDSGK*SCSHLA
Trigger: AGCCAGGTGAGAGCATGAGCACTTCCCTGAGTCCTC...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGTCTAACGCCTACTTTTaGTGGACACTCTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMSNAYF*WTLCWT
Trigger: GGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGA...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGTCATCACCAGCCAGTaGGCACCTGCAACCACAAAA +
Preference number: 4 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLVITSQ*APATTK
Trigger: TTTTGTGGTTGCAGGTGCCCACTGGCTGGTGATGAC...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCACATCCTGCTGATCGCTaGCAAAAGATACGTAACTTG +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSHPADR*QKIRNL
Trigger: CAAGTTACGTATCTTTTGCCAGCGATCAGCAGGATG...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTCATCCTGCTGATCGCTaGCAAAAGATACGTAACTTG +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFAHPADR*QKIRNL
Trigger: CAAGTTACGTATCTTTTGCCAGCGATCAGCAGGATG...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGGAAGGACTGAGATGCTaGGATAGCACAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVEGLRC*DSTVNG
Trigger: TCCATTCACTGTGCTATCCCAGCATCTCAGTCCTTC...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp ACTTCCTTAGGCAGCCCTGCCAGATGTCTGTGGATTTaGGATGCAGCAGGCTGTAATAAATTACCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: TSLGSPARCLWI*DAAGCNKLPVR
Trigger: TCTCACTGGTAATTTATTACAGCCTGCTGCATCCAAAATCCACAGACATCTGGCAGGGCTGCCTAAGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
3UTR CAA 72 bp TTATCTTCACCTGTTGTATGGAAAGTTTGTAGCCACTaGTCTGCATCCCCGATTGGCTTATGTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSSPVVWKVCSH*SASPIGLCGWP
Trigger: TGGCCAGCCACATAAGCCAATCGGGGATGCAGACAAGTGGCTACAAACTTTCCATACAACAGGTGAAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAACTTCTGCAGTGGCGCTaGAGTACAACGTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKLLQWR*STTWNS
Trigger: AGAGTTCCACGTTGTACTTCAGCGCCACTGCAGAAG...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCAGGTAGCAGACAATTTTaGCTGGAATCTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSGSRQF*LESLSP
Trigger: AGGAGAAAGAGATTCCAGTCAAAATTGTCTGCTACC...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTTTACCAGTGAGACACTaGCAATCAGAAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPLPVRH*QSEIQT
Trigger: TGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAA...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACGCTTCATCTGTTCCCTaGAGCTGCAGTCCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDASSVP*SCSPFG
Trigger: TCCAAACGGACTGCAGCTGCAGGGAACAGATGAAGC...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTAGAAAAATACATTTATaGAGCTGGCCAGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPRKIHL*SWPGGC
Trigger: GCATCCTCCTGGCCAGCTGCATAAATGTATTTTTCT...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATAACATGCCTTGATTTCTaGATACTCAGTGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GLEQQVHALISAYSVPVITCLDF*ILSACH
Trigger: ATGACAGGCACTGAGTATGCAGAAATCAAGGCATGT...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTGTCATCACCAGCCAGTaGGCACCTGCAACCACAAAA +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSVITSQ*APATTK
Trigger: TTTTGTGGTTGCAGGTGCCCACTGGCTGGTGATGAC...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCGACTTAGCTCCCTTTTaGGCTCCAGCGGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSDLAPF*APAAPL
Trigger: TAGAGGAGCCGCTGGAGCCCAAAAGGGAGCTAAGTC...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGTTTCAGGGATGCAGATaGAGATTCAGAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWFQGCR*RFRGDS
Trigger: ACTGTCACCTCTGAATCTCCATCTGCATCCCTGAAA...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAGTGTCTCACATTGAATaGAAGTGGGAACAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPVSHIE*KWEQSL
Trigger: CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACAC...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTGTCTCACATTGAATaGAAGTGGGAACAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: RCQKWDFLSHGTKWPAWFVSHIE*KWEQSL
Trigger: CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACAC...AAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTGTCTGCATCCCCGATTaGCTTATGTGGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSFPGYSRARKFEKNEQIVCIPD*LMWLAR
Trigger: CCTGGCCAGCCACATAAGCCAATCGGGGATGCAGAC...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCGTCTTGGAGGACAAATaGGGAGGGCTGGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSVLEDK*GGLVRT
Trigger: AGTCCTCACCAGCCCTCCCCATTTGTCCTCCAAGAC...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp ATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTaGGACATAAAGGAGATGGGGTGGAAAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: IVSHIEWKWEQS*DIKEMGWKAAV
Trigger: CACTGCTGCTTTCCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGGATAGTGTCTCACATTaGATGGAAGTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: IPSHKEHFRVEESERRRVDSVSH*MEVGTK
Trigger: CTTTGTTCCCACTTCCATTCAATGTGAGACACTATC...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATTGGGTTCTGGGTAGGTaGTTCATCCTGCTGATCGCT +
Preference number: 4 (lower is better)
Translates to: LVITSTQALPTPRKHANYWVLGR*FILLIA
Trigger: AGCGATCAGCAGGATGAAGCACCTACCCAGAACCCA...ATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTTTCATTTTTCAGGGATaGAGATGGAGATTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RCQKWDFLSHGTKWPAWFFIFQG*RWRFRG
Trigger: ACCTCTGAATCTCCATCTGCATCCCTGAAAAATGAA...AAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTTTCATTTTTCAGGGATaGAGATGGAGATTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: APLVSEFMLLNALTPTFAFIFQG*RWRFRG
Trigger: ACCTCTGAATCTCCATCTGCATCCCTGAAAAATGAA...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTTTTTGCTGGACACTCTaGTGGACCTTGGAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSFCWTL*WTLELA
Trigger: GGCTAACTCCAAGGTCCAGCAGAGTGTCCAGCAAAA...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGATTCATGCTGTTGAATaGTCTAACGCCTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLIHAVE*SNAYFC
Trigger: GCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAAT...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTACGAACAGCAAGTACATaGCTTGATTTCTGCATACTC +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLRTAST*LDFCIL
Trigger: GAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCG...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTTGCATTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGGGGGCTTCCCTAAAATaGTTGGTTCATAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: FALDLQNHPALFLHFSGMGASLK*LVHNLP
Trigger: GGGCAAGTTATGAACCAACCATTTTAGGGAAGCCCC...CATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATCTCACGGTACCAAATaGCCAGCTTGGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKSHGTK*PAWFVS
Trigger: GCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGA...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCATTCCTCCCTTCTTTTTaGATGGGCTTAAATCATGGA +
Preference number: 4 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSFLPSF*MGLNHG
Trigger: TCCATGATTTAAGCCCATCCAAAAAGAAGGGAGGAA...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTAAAGAACACTTTAGAGTaGAGGAGTCAGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLKNTLE*RSQREG
Trigger: TCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTT...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTGTCTTGGAGGACAAATaGGGAGGGCTGGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: SSFPGYSRARKFEKNEQIVLEDK*GGLVRT
Trigger: AGTCCTCACCAGCCCTCCCCATTTGTCCTCCAAGAC...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp AGAGTGCGAGAGGAATGGACGTTTCCTCCCTTCTTTTaGGATGGGCTTAAATCATGGATAGTGTCTCACATT +
Preference number: 4 (lower is better)
Translates to: RVREEWTFPPFF*DGLKSWIVSHI
Trigger: AATGTGAGACACTATCCATGATTTAAGCCCATCCAAAAAGAAGGGAGGAAACGTCCATTCCTCTCGCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCGATATGCACTCAAGCTaGAATTCATGCCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSDMHSS*NSCPQP
Trigger: GGGCTGTGGGCATGAATTTCAGCTTGAGTGCATATC...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGTTACCAGTGAGACACTaGCAATCAGAAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMLPVRH*QSEIQT
Trigger: TGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAA...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTCCTTAGGCAGCCCTaGCAGATGTCTGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKFLRQP*QMSVDF
Trigger: AAAATCCACAGACATCTGGCAGGGCTGCCTAAGGAA...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGTGTTTTATCACCTCCTaGAATGCCACAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLCFITS*NATGLP
Trigger: AGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACA...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACTTAGAGTCTCTCCTATaGATGGGTGGGGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDLESLL*MGGVCD
Trigger: ATCACAGACCCCACCCATGCATAGGAGAGACTCTAA...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGTACTCCCAGAAAGCATaGAAATTATCTTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLYSQKA*KLSYQE
Trigger: CTCTTGGTAAGATAATTTGCATGCTTTCTGGGAGTA...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CCCATATCCCACCCTTACTTTTACCCCATAACACAAATGCCGTTGATCCAGGATATTCATGCTGTTGAATaGTCTAACGCCTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: PISHPYFYPITQMPLIQDIHAVE*SNAYFC
Trigger: GCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAAT...ATCCTGGATCAACGGCATTTGTGTTATGGGGTAAAAGTAAGGGTGGGATATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACAGTCTCTCCTATGCATaGGTGGGGTCTGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDSLSYA*VGSVMF
Trigger: AAACATCACAGACCCCACCCATGCATAGGAGAGACT...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCACATTGAATGGAAGTaGGAACAAAGCTTGGACATA +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWHIEWK*EQSLDI
Trigger: TATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTAGAAAAACATATGTCTaGAGCAGCAGGTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSFPGYSRARKFEKNEQIRKTYV*SSRWGP
Trigger: TGGGCCCCACCTGCTGCTTCAGACATATGTTTTTCT...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTATGACTGTGGTCAGATaGAAAAACTCGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSMTVVR*KNSALA
Trigger: AGCAAGAGCCGAGTTTTTTCATCTGACCACAGTCAT...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTGATATGCACTCAAGCTaGAATTCATGCCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: SSFPGYSRARKFEKNEQIDMHSS*NSCPQP
Trigger: GGGCTGTGGGCATGAATTTCAGCTTGAGTGCATATC...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGTCTTCTGTCATCTCATaGTGCATTTACAAGTGGATT +
Preference number: 4 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWSSVIS*CIYKWI
Trigger: AATCCACTTGTAAATGCAGCATGAGATGACAGAAGA...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTCAGCCAGTGGGCACCTaGAACCACAAAAACCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSFPGYSRARKFEKNEQIQPVGT*NHKNPK
Trigger: TTTTGGGTTTTTGTGGTTGCAGGTGCCCACTGGCTG...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACTGTTTGCATTGGACCTaGAAAATCATCCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDCLHWT*KIIQPC
Trigger: ACAGGGCTGGATGATTTTGCAGGTCCAATGCAAACA...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCTTAGAGTCTCTCCTATaGATGGGTGGGGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSLESLL*MGGVCD
Trigger: ATCACAGACCCCACCCATGCATAGGAGAGACTCTAA...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTTCTCACGGTACCAAATaGCCAGCTTGGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSFPGYSRARKFEKNEQISHGTK*PAWFVS
Trigger: GCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGA...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGGATGGGCTTAAATCATaGATAGTGTCTCACATTGAA +
Preference number: 4 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWDGLKS*IVSHIE
Trigger: TTCAATGTGAGACACTATCCATGATTTAAGCCCATC...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCAGAGTGCGAGAGGAATaGACGTTTCCTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSRVREE*TFPPFF
Trigger: AAAGAAGGGAGGAAACGTCCATTCCTCTCGCACTCT...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
3UTR CAA 72 bp TTTCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTaGAAAAGAATGAGCAAATTCCCCATATCCCACCCT +
Preference number: 4 (lower is better)
Translates to: FLAFQAIQGLES*KRMSKFPISHP
Trigger: AGGGTGGGATATGGGGAATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACTGTCTTATCCCACCATaGCTGTGGTCAGATGAAAAA +
Preference number: 4 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDCLIPP*LWSDEK
Trigger: TTTTTCATCTGACCACAGTCATGGTGGGATAAGACA...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAAGATGTCTGTGGATTTTaGATGCAGCAGGCTGTAATA +
Preference number: 4 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKDVCGF*MQQAVI
Trigger: TATTACAGCCTGCTGCATCCAAAATCCACAGACATC...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTGATGTCTGTGGATTTTaGATGCAGCAGGCTGTAATA +
Preference number: 4 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSDVCGF*MQQAVI
Trigger: TATTACAGCCTGCTGCATCCAAAATCCACAGACATC...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR GCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGTCTGTCATCTCATGCTaGATTTACAAGTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLSVISC*IYKWIC
Trigger: ACAAATCCACTTGTAAATGCAGCATGAGATGACAGA...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR GCA 90 bp TTTGCATTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGTACTCCCAGAAAGCATaGAAATTATCTTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: FALDLQNHPALFLHFSGMYSQKA*KLSYQE
Trigger: CTCTTGGTAAGATAATTTGCATGCTTTCTGGGAGTA...CATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CCA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGATGGGCTTAAATCATaGATAGTGTCTCACATTGAA +
Preference number: 4 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLDGLKS*IVSHIE
Trigger: TTCAATGTGAGACACTATCCATGATTTAAGCCCATC...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR TCA 90 bp TTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATGTAATAAATTACCAGTaGGACACTGCCAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: LVITSTQALPTPRKHANYVINYQ*DTANQK
Trigger: TTTCTGATTGGCAGTGTCTCACTGGTAATTTATTAC...ATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS CCA 90 bp GCTGCAGCCAGCCTCGGTGGGGAGCCTCCAGTTCCTTCTGCAGACTaGTCAGTGCAGCGTCCCAGTGCCGCTTCCAAACACCAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: AAASLGGEPPVPSAD*SVQRPSAASKHQAV
Trigger: TACAGCTTGGTGTTTGGAAGCGGCACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCACCGAGGCTGGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618742.3
ENST00000642649.1
ENST00000647027.1
CDS-3UTR CAA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGACACTCTGCTGGACCTaGGAGTTAGCCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQTLCWT*ELAQKE
Trigger: CTCCTTCTGGGCTAACTCCAAGGTCCAGCAGAGTGT...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CAA 90 bp AGCAGGTGGGGCCCAGTCTGCAGCAGGGCCTCCAAGAGTCGAAGGGCCGACAGGGCTTCCCTAAAATGGTaGGTTCATAACTTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: SRWGPVCSRASKSRRADRASLKW*VHNLPL
Trigger: AAGGGGCAAGTTATGAACCAACCATTTTAGGGAAGC...CCTGTCGGCCCTTCGACTCTTGGAGGCCCTGCTGCAGACTGGGCCCCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CAA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGGCAGCTGCAGTCCGTTaGGATAGACTCAGACTTAGG +
Preference number: 5 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQAAAVR*DRLRLR
Trigger: CCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTGC...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CAA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTCCAGAGTGGGCCGTTaGCAGAGTAGCTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCSRVGR*QSSWAA
Trigger: GGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGGA...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TCAGGGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTCTGAGAAGCCGATGTaGGTCCACAGGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SGRQGFKFRKRSPEGKGQSEKPM*VHRASN
Trigger: GTTCGAGGCCCTGTGGACCAACATCGGCTTCTCAGA...CTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCAGCCCCCACGAGCAGGTaGAACAGCCTCCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPAPTSR*NSLQWQ
Trigger: CTGCCACTGGAGGCTGTTCAACCTGCTCGTGGGGGC...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCAGCCCCCACGAGCAGGTaGAACAGCCTCCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSAPTSR*NSLQWQ
Trigger: CTGCCACTGGAGGCTGTTCAACCTGCTCGTGGGGGC...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTAGCTGTTCTCTAAGGTaGAGGGGTCACGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCSCSLR*RGHGMR
Trigger: CCTCATCCCGTGACCCCTCAACCTTAGAGAACAGCT...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGACACTCTGCTGGACCTaGGAGTTAGCCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMTLCWT*ELAQKE
Trigger: CTCCTTCTGGGCTAACTCCAAGGTCCAGCAGAGTGT...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGTCTCCAAAGGCGGCATaGATCTTAGACACATTTCCT +
Preference number: 5 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWSPKAA*ILDTFP
Trigger: AGGAAATGTGTCTAAGATCAATGCCGCCTTTGGAGA...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp AGGGCTGTCCCAGAAGCTGAGGTAGCAGAGGATGTACACGGCCCCCACGAGCAGTTCACTAAAGAAAAATaGCTAAACCAAGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: RAVPEAEVAEDVHGPHEQFTKEK*LNQGAC
Trigger: GCATGCACCTTGGTTTAGCAATTTTTCTTTAGTGAA...CTGCTCGTGGGGGCCGTGTACATCCTCTGCTACCTCAGCTTCTGGGACAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CAA 90 bp ATGCTCTCACCTGGCTGGGCGAGAGACTGCATGGAGGAAGGACTGAGATGCTGGTTTCCTCCCTTCTTTTaGGATGGGCTTAAATCATGG +
Preference number: 5 (lower is better)
Translates to: MLSPGWARDCMEEGLRCWFPPFF*DGLKSW
Trigger: CCATGATTTAAGCCCATCCAAAAAGAAGGGAGGAAA...CCAGCATCTCAGTCCTTCCTCCATGCAGTCTCTCGCCCAGCCAGGTGAGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTAAAGTTTGTAGCCACTaGTCTGCATCCCCGATTGGC +
Preference number: 5 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCKVCSH*SASPIG
Trigger: GCCAATCGGGGATGCAGACAAGTGGCTACAAACTTT...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGACCAAGAGGAGATGTTaGAGTGGAGTCTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMTKRRC*SGVLED
Trigger: GTCCTCCAAGACTCCACTCAAACATCTCCTCTTGGT...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGTCTGAGAAGCCGATGTaGGTCCACAGGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLSEKPM*VHRASN
Trigger: GTTCGAGGCCCTGTGGACCAACATCGGCTTCTCAGA...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTAGCTGTTCTCTAAGGTaGAGGGGTCACGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: APLVSEFMLLNALTPTFASCSLR*RGHGMR
Trigger: CCTCATCCCGTGACCCCTCAACCTTAGAGAACAGCT...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GGAGGCAGGGCTTCAAGTTTAGGAAGAGGTCACCAGAGGGCAAAGGGCAGTGGATCTGTGATGTTTGCATaGGACCTGCAAAATCATCCA +
Preference number: 5 (lower is better)
Translates to: GGRASSLGRGHQRAKGSGSVMFA*DLQNHP
Trigger: TGGATGATTTTGCAGGTCCAATGCAAACATCACAGA...TCCACTGCCCTTTGCCCTCTGGTGACCTCTTCCTAAACTTGAAGCCCTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGAGATGGGCAGATCGCTaGAGCTCAGGAGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLRWADR*SSGVGD
Trigger: GTCTCCAACTCCTGAGCTCAAGCGATCTGCCCATCT...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTTGGTTGGTTCATAACTaGCCCCTTGGCATGAGCCTG +
Preference number: 5 (lower is better)
Translates to: APLVSEFMLLNALTPTFAWLVHN*PLGMSL
Trigger: CAGGCTCATGCCAAGGGGCAAGTTATGAACCAACCA...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGCTGCAGGTAGTCCTGTaGACTCAACCCCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMLQVVL*TQPPCR
Trigger: CCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAG...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp AGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCTTCCAGAGTGGGCCGTTaGCAGAGTAGCTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SYYKHTGLTYSQKACKLSSRVGR*QSSWAA
Trigger: GGCAGCCCAGCTACTCTGCAAACGGCCCACTCTGGA...AGATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCAGCAGCTGCAGTCCGTTaGGATAGACTCAGACTTAGG +
Preference number: 5 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSAAAVR*DRLRLR
Trigger: CCTAAGTCTGAGTCTATCCAAACGGACTGCAGCTGC...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTTGCATTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGGCTGGAAGGGAACTCTaGGCTGGCCAGCCTGCACAA +
Preference number: 5 (lower is better)
Translates to: FALDLQNHPALFLHFSGMAGREL*AGQPAQ
Trigger: TTGTGCAGGCTGGCCAGCCAAGAGTTCCCTTCCAGC...CATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TCTCTCCTATGCATGGGTGGGGTCTGTGATGTTTGCATTGGACCTGCAAAATCATGTTTGAGTGGAGTCTaGGAGGACAAATGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SLLCMGGVCDVCIGPAKSCLSGV*EDKWGG
Trigger: CCCTCCCCATTTGTCCTCCAAGACTCCACTCAAACA...TGATTTTGCAGGTCCAATGCAAACATCACAGACCCCACCCATGCATAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp AGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTTGTTTGAGTGGAGTCTaGGAGGACAAATGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: RCQKWDFLSHGTKWPAWFCLSGV*EDKWGG
Trigger: CCCTCCCCATTTGTCCTCCAAGACTCCACTCAAACA...AAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTGTATGCAGCAAGTACATGCCTaGATTTCTGCATACTCAGTG +
Preference number: 5 (lower is better)
Translates to: RCEPLHPTQSLVIFTCCMQQVHA*ISAYSV
Trigger: CACTGAGTATGCAGAAATCAAGGCATGTACTTGCTG...CATACAACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTATGGTTGGTTCATAACTaGCCCCTTGGCATGAGCCTG +
Preference number: 5 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLWLVHN*PLGMSL
Trigger: CAGGCTCATGCCAAGGGGCAAGTTATGAACCAACCA...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGCTGCAGGTAGTCCTGTaGACTCAACCCCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLLQVVL*TQPPCR
Trigger: CCTGCATGGGGGTTGAGTCAACAGGACTACCTGCAG...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GATTACCGGTGTGAGCCCCTGCATCCGACCCAAAGTCTCGTTATCTTCACCTGTTCTGTGATGTTTGCATaGGACCTGCAAAATCATCCA +
Preference number: 5 (lower is better)
Translates to: DYRCEPLHPTQSLVIFTCSVMFA*DLQNHP
Trigger: TGGATGATTTTGCAGGTCCAATGCAAACATCACAGA...ACAGGTGAAGATAACGAGACTTTGGGTCGGATGCAGGGGCTCACACCGGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CAAGGACACAGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAAAGTGGGAACAAAGCTaGGACATAAAGGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: QGHRCQKWDFLSHGTKWPKWEQS*DIKEMG
Trigger: CCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTT...TGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCTGTGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTTGCATTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGTGTCTGCATCCCCGATaGGCTTATGTGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: FALDLQNHPALFLHFSGMCLHPR*AYVAGQ
Trigger: CTGGCCAGCCACATAAGCCAATCGGGGATGCAGACA...CATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAATGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATAAAAGTTTGTAGCCACTaGTCTGCATCCCCGATTGGC +
Preference number: 5 (lower is better)
Translates to: GLEQQVHALISAYSVPVIKVCSH*SASPIG
Trigger: GCCAATCGGGGATGCAGACAAGTGGCTACAAACTTT...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TCTCTTCTCTCTGTTTTATCACCTCCTGCAATGCCACAGGACTTCCTTAGGCAGACCAAGAGGAGATGTTaGAGTGGAGTCTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SLLSVLSPPAMPQDFLRQTKRRC*SGVLED
Trigger: GTCCTCCAAGACTCCACTCAAACATCTCCTCTTGGT...CTGCCTAAGGAAGTCCTGTGGCATTGCAGGAGGTGATAAAACAGAGAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CAA 90 bp GGCCTCGAACAGCAAGTACATGCCTTGATTTCTGCATACTCAGTGCCTGTCATACATTTACAAGTGGATTaGTGGGCGCTTCCAAACACC +
Preference number: 5 (lower is better)
Translates to: GLEQQVHALISAYSVPVIHLQVD*WALPNT
Trigger: GGTGTTTGGAAGCGCCCACAAATCCACTTGTAAATG...TATGACAGGCACTGAGTATGCAGAAATCAAGGCATGTACTTGCTGTTCGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CAA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTAATGGCCAGCTTGGTTaGTCAGCCTGTTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPNGQLG*SACCLI
Trigger: GATAAGACAACAGGCTGACAAACCAAGCTGGCCATT...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp ATACCTAGCCACAAAGAACACTTTAGAGTGGAGGAGTCAGAGAGAAGGAGAGTGTACCAAATGGCCAGCTaGGTTTGTCAGCCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: IPSHKEHFRVEESERRRVYQMAS*VCQPVV
Trigger: GACAACAGGCTGACAAACCAAGCTGGCCATTTGGTA...CACTCTCCTTCTCTCTGACTCCTCCACTCTAAAGTGTTCTTTGTGGCTAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATGCTGGAAGGGAACTCTaGGCTGGCCAGCCTGCACAA +
Preference number: 5 (lower is better)
Translates to: LVITSTQALPTPRKHANYAGREL*AGQPAQ
Trigger: TTGTGCAGGCTGGCCAGCCAAGAGTTCCCTTCCAGC...ATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTGGACACTCTGCTGGACCTAAGTGGGAACAAAGCTaGGACATAAAGGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: FMLLNALTPTFAGHSAGPKWEQS*DIKEMG
Trigger: CCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTT...AGGTCCAGCAGAGTGTCCAGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CTTTCTCCTCCTCTAAAGTATGTTAGAGTCTCTCCTATGCATGGGTGGGGTCTGGCTTCCCTAAAATGGTaGGTTCATAACTTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LSPPLKYVRVSPMHGWGLASLKW*VHNLPL
Trigger: AAGGGGCAAGTTATGAACCAACCATTTTAGGGAAGC...CAGACCCCACCCATGCATAGGAGAGACTCTAACATACTTTAGAGGAGGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGGAATGGCCAGCTTGGTTaGTCAGCCTGTTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: WTCKIIQPCFFIFQGCRWNGQLG*SACCLI
Trigger: GATAAGACAACAGGCTGACAAACCAAGCTGGCCATT...CCATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAAAGATGGGCAGATCGCTaGAGCTCAGGAGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: YVSYYKHTGLTYSQKACKRWADR*SSGVGD
Trigger: GTCTCCAACTCCTGAGCTCAAGCGATCTGCCCATCT...TTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTACAAAAGATACGTAACTaGAGGTTTCCAATGGGTCGG +
Preference number: 5 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLQKIRN*RFPMGR
Trigger: CCGACCCATTGGAAACCTCAAGTTACGTATCTTTTG...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGTGGTTTGTCAGCCTGTaGTCTTATCCCACCATGACT +
Preference number: 5 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMWFVSL*SYPTMT
Trigger: AGTCATGGTGGGATAAGACAACAGGCTGACAAACCA...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp ATCCTTTTCATCACCGGGCAATATGCTTTCTGGAGGCATGAAGTGAGGAAGCCATTTCCTCCCTTCTTTTaGGATGGGCTTAAATCATGG +
Preference number: 5 (lower is better)
Translates to: ILFITGQYAFWRHEVRKPFPPFF*DGLKSW
Trigger: CCATGATTTAAGCCCATCCAAAAAGAAGGGAGGAAA...TGGCTTCCTCACTTCATGCCTCCAGAAAGCATATTGCCCGGTGATGAAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TCTAGCTTTCCAGGCTATTCAAGGGCTAGAAAGTTTGAAAAGAATGAGCAAATTTGTCTGCATCCCCGATaGGCTTATGTGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SSFPGYSRARKFEKNEQICLHPR*AYVAGQ
Trigger: CTGGCCAGCCACATAAGCCAATCGGGGATGCAGACA...AATTTGCTCATTCTTTTCAAACTTTCTAGCCCTTGAATAGCCTGGAAAGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GCCCCGCTCGTTAGTGAATTCATGCTGTTGAATGCTCTAACGCCTACTTTTGCTAGTGAATTCATGCTGTaGAATGCTCTAACGCCTACT +
Preference number: 5 (lower is better)
Translates to: APLVSEFMLLNALTPTFASEFML*NALTPT
Trigger: AGTAGGCGTTAGAGCATTCAACAGCATGAATTCACT...AGCAAAAGTAGGCGTTAGAGCATTCAACAGCATGAATTCACTAACGAGCGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp AGGTGTCAGAAGTGGGATTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTATAACACAAATGCCGTaGATCCAGGATATGCACTCA +
Preference number: 5 (lower is better)
Translates to: RCQKWDFLSHGTKWPAWFITQMP*IQDMHS
Trigger: TGAGTGCATATCCTGGATCAACGGCATTTGTGTTAT...AAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAATCCCACTTCTGACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCAGCAAGTACATGCCTaGATTTCTGCATACTCAGTG +
Preference number: 5 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWQQVHA*ISAYSV
Trigger: CACTGAGTATGCAGAAATCAAGGCATGTACTTGCTG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTGGACCTGCAAAATCATCCAGCCCTGTTTCTTCATTTTTCAGGGATGCAGATGAGATGTCTGTGGATTTaGGATGCAGCAGGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: LDLQNHPALFLHFSGMQMRCLWI*DAAGCN
Trigger: ATTACAGCCTGCTGCATCCAAAATCCACAGACATCT...CATCTGCATCCCTGAAAAATGAAGAAACAGGGCTGGATGATTTTGCAGGTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GCAGGCTGTAATAAATTACCAGTGAGACACTGCCAATCAGAAATCCAGACAGGATCTCCAAAGGCGGCATaGATCTTAGACACATTTCCT +
Preference number: 5 (lower is better)
Translates to: AGCNKLPVRHCQSEIQTGSPKAA*ILDTFP
Trigger: AGGAAATGTGTCTAAGATCAATGCCGCCTTTGGAGA...TCCTGTCTGGATTTCTGATTGGCAGTGTCTCACTGGTAATTTATTACAGCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4
CDS-3UTR CAA 90 bp TCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAAAGGAGATGGGGTGGCGTTATCTTCACCTGTaGTATGGAAAGTTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SHIEWKWEQSLDIKEMGWRYLHL*YGKFVA
Trigger: GGCTACAAACTTTCCATACAACAGGTGAAGATAACG...CCACCCCATCTCCTTTATGTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTTCCTTTCTCACGGTACCAAATGGCCAGCTTGGTTTGTCAGCCTGTTGTCTTAAGTGAATTCATGCTGTaGAATGCTCTAACGCCTACT +
Preference number: 5 (lower is better)
Translates to: FPFSRYQMASLVCQPVVLSEFML*NALTPT
Trigger: AGTAGGCGTTAGAGCATTCAACAGCATGAATTCACT...TAAGACAACAGGCTGACAAACCAAGCTGGCCATTTGGTACCGTGAGAAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp GGGCTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGCAAAAGATACGTAACTaGAGGTTTCCAATGGGTCGG +
Preference number: 5 (lower is better)
Translates to: GLKSWIVSHIEWKWEQSLQKIRN*RFPMGR
Trigger: CCGACCCATTGGAAACCTCAAGTTACGTATCTTTTG...CAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCTACCAAATGGCCAGCTaGGTTTGTCAGCCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSYQMAS*VCQPVV
Trigger: GACAACAGGCTGACAAACCAAGCTGGCCATTTGGTA...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp ATTTGCACTTTCAGTTATGTTAGTTATTACAAGCACACAGGCCTTACCTACTCCTGGTTTGTCAGCCTGTaGTCTTATCCCACCATGACT +
Preference number: 5 (lower is better)
Translates to: ICTFSYVSYYKHTGLTYSWFVSL*SYPTMT
Trigger: AGTCATGGTGGGATAAGACAACAGGCTGACAAACCA...GGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAACATAACTGAAAGTGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp CTTAAATCATGGATAGTGTCTCACATTGAATGGAAGTGGGAACAAAGCTTGGACATAACACAAATGCCGTaGATCCAGGATATGCACTCA +
Preference number: 5 (lower is better)
Translates to: LKSWIVSHIEWKWEQSLDITQMP*IQDMHS
Trigger: TGAGTGCATATCCTGGATCAACGGCATTTGTGTTAT...GTCCAAGCTTTGTTCCCACTTCCATTCAATGTGAGACACTATCCATGATTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS-3UTR CAA 90 bp TTAGTTATTACAAGCACACAGGCCTTACCTACTCCCAGAAAGCATGCAAATTATCGTTATCTTCACCTGTaGTATGGAAAGTTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: LVITSTQALPTPRKHANYRYLHL*YGKFVA
Trigger: GGCTACAAACTTTCCATACAACAGGTGAAGATAACG...ATAATTTGCATGCTTTCTGGGAGTAGGTAAGGCCTGTGTGCTTGTAATAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618742.3
ENST00000618990.4
CDS GCA 72 bp TGCAGCCAGCCTCGGTGGGGAGCCTCCAGTTCCTTCTaGAGACTGGTCAGTGCAGCGTCCCAGTGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: CSQPRWGASSSF*RLVSAASQCRF
Trigger: GAAGCGGCACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCACCGAGGCTGGCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618742.3
ENST00000642649.1
ENST00000647027.1
CDS TCA 72 bp CAAGGGCCAGCCACCCCCACAGAAGCCGTCCTGTGGTaGAGTAGTAAGCCACGGTGTAAAGGCGCGCGCTCT +
Preference number: 6 (lower is better)
Translates to: QGPATPTEAVLW*SSKPRCKGARS
Trigger: AGAGCGCGCGCCTTTACACCGTGGCTTACTACTTCACCACAGGACGGCTTCTGTGGGGGTGGCTGGCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618742.3
ENST00000618990.4
ENST00000642649.1
ENST00000647027.1
CDS CCA 72 bp AGCCTCGGTGGGGAGCCTCCAGTTCCTTCTGCAGACTaGTCAGTGCAGCGTCCCAGTGCCGCTTCCAAACAC +
Preference number: 6 (lower is better)
Translates to: SLGGEPPVPSAD*SVQRPSAASKH
Trigger: GTGTTTGGAAGCGGCACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCACCGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618742.3
ENST00000642649.1
ENST00000647027.1
CDS GCA 72 bp GTGGGGAGCCTCCAGTTCCTTCTGCAGACTGGTCAGTaGAGCGTCCCAGTGCCGCTTCCAAACACCAAGCTG +
Preference number: 6 (lower is better)
Translates to: VGSLQFLLQTGQ*SVPVPLPNTKL
Trigger: CAGCTTGGTGTTTGGAAGCGGCACTGGGACGCTGCACTGACCAGTCTGCAGAAGGAACTGGAGGCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618742.3
ENST00000642649.1
ENST00000647027.1
CDS CCA 72 bp AGGCCTTCTTCTGTCATCTCATGCTGCATTTACAAGTaGATTTGTGGGCGCTTCCAAACACCAAGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: RPSSVISCCIYK*ICGRFQTPSCR
Trigger: CCTACAGCTTGGTGTTTGGAAGCGCCCACAAATCCACTTGTAAATGCAGCATGAGATGACAGAAGAAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618990.4