RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XKR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000206579

Ensembl transcript IDs: ENST00000327381.7, ENST00000622811.1

Found 873 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTaGCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGAC +
Preference number: 1 (lower is better)
Translates to: GNRSGSSPFLWLAPH*RYVPMGAAHAWESD
Trigger: GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 90 bp CCAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTaGTTTGGAAGGAGACCAGCCGCCCCCAGCCGACAGGATCAAATG +
Preference number: 1 (lower is better)
Translates to: PASFFQVESETLGCS*FGRRPAAPSRQDQM
Trigger: CATTTGATCCTGTCGGCTGGGGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp ACTCATTCTGCGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTaGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACAT +
Preference number: 1 (lower is better)
Translates to: THSASGNRSGSSPFL*LAPHCRYVPMGAAH
Trigger: ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACGCAGAATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 90 bp ATTAAGCCAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTaGAGCTGCTTTGGAAGGAGACCAGCCGCCCCCAGCCGACAGGAT +
Preference number: 1 (lower is better)
Translates to: IKPASFFQVESETLG*SCFGRRPAAPSRQD
Trigger: ATCCTGTCGGCTGGGGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTGGCTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp CCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATaGGCGCTGCACATGCCTGGGAATCAGACTCTCATTTTGCCTTTT +
Preference number: 1 (lower is better)
Translates to: PAHSSGSRRTAVMSQ*ALHMPGNQTLILPF
Trigger: AAAAGGCAAAATGAGAGTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp AGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTCTGCGTCTaGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCA +
Preference number: 1 (lower is better)
Translates to: SQHLPMVTQSHSFCV*KQIRFQPIPLARAA
Trigger: TGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACGCAGAATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 90 bp GACGGTCCCACTAGGAACTTCACGGCTCACTGCCCTGCTCTAGGATaGAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCATCTG +
Preference number: 1 (lower is better)
Translates to: DGPTRNFTAHCPALG*SVIMATALLSPLHL
Trigger: CAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGGCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 90 bp CAGTGTGGGTTTCCCCAGGAAGCTGGGGCTGACTGTCCTGACTCCTaGCTCCTGACTCCTGAAATTGTCACGCAGCACAGTGCTGCTCTT +
Preference number: 1 (lower is better)
Translates to: QCGFPQEAGADCPDS*LLTPEIVTQHSAAL
Trigger: AAGAGCAGCACTGTGCTGCGTGACAATTTCAGGAGTCAGGAGTCAGGAGTCAGGACAGTCAGCCCCAGCTTCCTGGGGAAACCCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp AGTGGTCTGATGCTGCCACCCAGGTGCCTATGTGAGGAGAAGGGATaGCACTCGAATGCTCAGGGCATTTCACGGCCTGTTACAGGTCCA +
Preference number: 1 (lower is better)
Translates to: SGLMLPPRCLCEEKG*HSNAQGISRPVTGP
Trigger: TGGACCTGTAACAGGCCGTGAAATGCCCTGAGCATTCGAGTGGCATCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCATCAGACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp ACACAACAACTTCAGTGGTCTGATGCTGCCACCCAGGTGCCTATGTaGGGAGAAGGGATGCCACTCGAATGCTCAGGGCATTTCACGGCC +
Preference number: 1 (lower is better)
Translates to: TQQLQWSDAATQVPM*GEGMPLECSGHFTA
Trigger: GGCCGTGAAATGCCCTGAGCATTCGAGTGGCATCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCATCAGACCACTGAAGTTGTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp GTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTaGAAGGAGACCAGCCGCCCCCAGCCGACAGGATCAAATGATAAT +
Preference number: 1 (lower is better)
Translates to: VILSGGVRDSRVQLL*KETSRPQPTGSNDN
Trigger: ATTATCATTTGATCCTGTCGGCTGGGGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 90 bp AGGGCTCAGTTGTGCAGAGATTCCCAGTTCCTTTGTCCCAGTCACTaGCCCATAGACCCTCCCATCCCTGCATCCAGAAAGGAATCCATC +
Preference number: 1 (lower is better)
Translates to: RAQLCRDSQFLCPSH*PIDPPIPASRKESI
Trigger: GATGGATTCCTTTCTGGATGCAGGGATGGGAGGGTCTATGGGTCAGTGACTGGGACAAAGGAACTGGGAATCTCTGCACAACTGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp CTAGAAAGGAGTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATaGTCACACAGAGCCACTCATTCTGCGTCTGGAAACAGATCCGGT +
Preference number: 1 (lower is better)
Translates to: LERSGTESSRVSICL*SHRATHSASGNRSG
Trigger: ACCGGATCTGTTTCCAGACGCAGAATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCACTCCTTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp CCACTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTaGATGGTGTTTGGCACTAGAAAGGAGTGGCACGGAGTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: PLILSCLGLPRQSCG*MVFGTRKEWHGVFQ
Trigger: CTGGAAGACTCCGTGCCACTCCTTTCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp TCTCGCCTGCTTTTAGGGGGCTCATGCCACTCATTCTCAGTTGTTTaGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTA +
Preference number: 1 (lower is better)
Translates to: SRLLLGGSCHSFSVV*GFHVSPVVGWCLAL
Trigger: TAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAGTGGCATGAGCCCCCTAAAAGCAGGCGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp GCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTaGATGACACACCCATTACAGGTGGTGGCTAGAGAACTGGACTAC +
Preference number: 1 (lower is better)
Translates to: ALCYFLWMSSWGHSL*MTHPLQVVARELDY
Trigger: GTAGTCCAGTTCTCTAGCCACCACCTGTAATGGGTGTGTCATCCAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp TTGGCACTAGAAAGGAGTGGCACGGAGTCTTCCAGAGTCAGCATCTaGCTATGGTCACACAGAGCCACTCATTCTGCGTCTGGAAACAGA +
Preference number: 1 (lower is better)
Translates to: LALERSGTESSRVSI*LWSHRATHSASGNR
Trigger: TCTGTTTCCAGACGCAGAATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCACTCCTTTCTAGTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp TCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATaGTGTTTGGCACTAGAAAGGAGTGGCACGGAGTCTTCCAGAGTC +
Preference number: 1 (lower is better)
Translates to: SFSVVWGFHVSPVVG*CLALERSGTESSRV
Trigger: GACTCTGGAAGACTCCGTGCCACTCCTTTCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 90 bp TGGGGGATAGAGCGGAATCGCCCATCCTTGGCCATTTTGAAACACTaGAGCATCAGGTGGGAGGAGTGTTATGAGTCAGAAGCTGACACA +
Preference number: 1 (lower is better)
Translates to: WGIERNRPSLAILKH*SIRWEECYESEADT
Trigger: TGTGTCAGCTTCTGACTCATAACACTCCTCCCACCTGATGCTCCAGTGTTTCAAAATGGCCAAGGATGGGCGATTCCGCTCTATCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp GTAGTACATCAAATACTCCACACACTGTGCTTCAAACTAGGGCACTaGGGGTCACTGCCTGCTGACAGTGGCCTCCCGCGAATAAAGACA +
Preference number: 1 (lower is better)
Translates to: VVHQILHTLCFKLGH*GSLPADSGLPRIKT
Trigger: TGTCTTTATTCGCGGGAGGCCACTGTCAGCAGGCAGTGACCCCCAGTGCCCTAGTTTGAAGCACAGTGTGTGGAGTATTTGATGTACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp ATATGTCAACACAACAACTTCAGTGGTCTGATGCTGCCACCCAGGTaGCTATGTGAGGAGAAGGGATGCCACTCGAATGCTCAGGGCATT +
Preference number: 1 (lower is better)
Translates to: ICQHNNFSGLMLPPR*LCEEKGCHSNAQGI
Trigger: AATGCCCTGAGCATTCGAGTGGCATCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCATCAGACCACTGAAGTTGTTGTGTTGACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp AATCTGCTGCTTATATATGTGGGAAGCCAATCACTCAGGAGAGAATaGAATCGGGTCCAAAGCCAGTGTGGGTTTCCCCAGGAAGCTGGG +
Preference number: 1 (lower is better)
Translates to: NLLLIYVGSQSLRRE*NRVQSQCGFPQEAG
Trigger: CCCAGCTTCCTGGGGAAACCCACACTGGCTTTGGACCCGATTGCATTCTCTCCTGAGTGATTGGCTTCCCACATATATAAGCAGCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp TCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGGATaGCACACCCATTACAGGTGGTGGCTAGAGAACTGGACTACTTTG +
Preference number: 1 (lower is better)
Translates to: SVTSCGCHRGDTVSG*HTHYRWWLENWTTL
Trigger: CAAAGTAGTCCAGTTCTCTAGCCACCACCTGTAATGGGTGTGTCATCCAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp TTTTTCCATAATAGTAGTACCCTCTGGTGGGTGCACCCAAGACCGTaGAGGAGGAGTTTGGTAGCAATGGAGAGTCCTATTAAGCCAGCG +
Preference number: 1 (lower is better)
Translates to: FFHNSSTLWWVHPRP*RRSLVAMESPIKPA
Trigger: CGCTGGCTTAATAGGACTCTCCATTGCTACCAAACTCCTCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTACTACTATTATGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 90 bp CAATACCTTGGAATACCTTATCTTAGAACCCACGAGAAGCTCTCCTaGAGAGCCCATAGGGACCAGTGGTCAAGGAGAACTATCACAGGG +
Preference number: 1 (lower is better)
Translates to: QYLGIPYLRTHEKLS*RAHRDQWSRRTITG
Trigger: CCCTGTGATAGTTCTCCTTGACCACTGGTCCCTATGGGCTCTGCAGGAGAGCTTCTCGTGGGTTCTAAGATAAGGTATTCCAAGGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp AAAAGCACAAGAACTGCCAAGATGATCATTCAGGTCCAGGCACTGTaGTCATACTGGGGGAAATGTCTACACCGTTCCCTACGCACACTC +
Preference number: 1 (lower is better)
Translates to: KSTRTAKMIIQVQAL*SYWGKCLHRSLRTL
Trigger: GAGTGTGCGTAGGGAACGGTGTAGACATTTCCCCCAGTATGAGCACAGTGCCTGGACCTGAATGATCATCTTGGCAGTTCTTGTGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp CAGCAACTAGATAAGACATATGTCAACACAACAACTTCAGTGGTCTaGTGCTGCCACCCAGGTGCCTATGTGAGGAGAAGGGATGCCACT +
Preference number: 1 (lower is better)
Translates to: QQLDKTYVNTTTSVV*CCHPGAYVRRRDAT
Trigger: AGTGGCATCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCATCAGACCACTGAAGTTGTTGTGTTGACATATGTCTTATCTAGTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp CGGAATCGCCCATCCTTGGCCATTTTGAAACACTGGAGCATCAGGTaGGAGGAGTGTTATGAGTCAGAAGCTGACACAAGCGATCTTTTT +
Preference number: 1 (lower is better)
Translates to: RNRPSLAILKHWSIR*EECYESEADTSDLF
Trigger: AAAAAGATCGCTTGTGTCAGCTTCTGACTCATAACACTCCTCCCACCTGATGCTCCAGTGTTTCAAAATGGCCAAGGATGGGCGATTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp ACCATGACCGAGGACACTGAGAACAGAAAGCGGGGAACGTTTACTTaGTGTACGGAGGTATTTAAAACCCAGAAGCTTGTTGTAAGAGTG +
Preference number: 1 (lower is better)
Translates to: TMTEDTENRKRGTFT*CTEVFKTQKLVVRV
Trigger: CACTCTTACAACAAGCTTCTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTCAGTGTCCTCGGTCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 90 bp ACATTGGATTGCCGAGACAAAGGAACGTTGATCTGCATCTGTCACTaGAATTATAGGAATGACCACCCCAGTCCTCCTGTGTTTTCACCA +
Preference number: 1 (lower is better)
Translates to: TLDCRDKGTLICICH*NYRNDHPSPPVFSP
Trigger: TGGTGAAAACACAGGAGGACTGGGGTGGTCATTCCTATAATTTCAGTGACAGATGCAGATCAACGTTCCTTTGTCTCGGCAATCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp GACCCAACACCCAATCCTGCTAGAGTAACTCTTACCCATGAACCTTaGTTAAGAGGACTATTTATTGCTCCTATATTCCCACGATTGGCC +
Preference number: 1 (lower is better)
Translates to: DPTPNPARVTLTHEP*LRGLFIAPIFPRLA
Trigger: GGCCAATCGTGGGAATATAGGAGCAATAAATAGTCCTCTTAAGCAAGGTTCATGGGTAAGAGTTACTCTAGCAGGATTGGGTGTTGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp CAGAATGTCATGCAGATAGTTGACAACAGGGGACTGAGAAATTACTaGTCCATTCTCTTCCATTTGCTGTTCACCTGCCACCTGTTCCAT +
Preference number: 1 (lower is better)
Translates to: QNVMQIVDNRGLRNY*SILFHLLFTCHLFH
Trigger: ATGGAACAGGTGGCAGGTGAACAGCAAATGGAAGAGAATGGACCAGTAATTTCTCAGTCCCCTGTTGTCAACTATCTGCATGACATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp TATATAGTGATGAAGAACCATTGTATTCTCTGCTTGGTGAGTTGTTaGTGTTGTATTCCTCAGACTCCACTTCCTCCGTGCTGCACACAG +
Preference number: 1 (lower is better)
Translates to: YIVMKNHCILCLVSC*CCIPQTPLPPCCTQ
Trigger: CTGTGTGCAGCACGGAGGAAGTGGAGTCTGAGGAATACAACAGCAACAACTCACCAAGCAGAGAATACAATGGTTCTTCATCACTATATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp CGTCATGGTACTACGGCTGAACGGAAGTGCTCCTTTTTCACTAACTaGTTAATGTTCCCTTGCAGGAGCTTGGTTACAATATTACAAGTC +
Preference number: 1 (lower is better)
Translates to: RHGTTAERKCSFFTN*LMFPCRSLVTILQV
Trigger: GACTTGTAATATTGTAACCAAGCTCCTGCAAGGGAACATTAATCAGTTAGTGAAAAAGGAGCACTTCCGTTCAGCCGTAGTACCATGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp GAACTTCTCTGCTCTGTGAAAAGGCAAATACTATGGATGAGCCACTaGCAGGTTTTCTCTTCATCACCATACTTGGGCCTCTACATTAAT +
Preference number: 1 (lower is better)
Translates to: ELLCSVKRQILWMSH*QVFSSSPYLGLYIN
Trigger: ATTAATGTAGAGGCCCAAGTATGGTGATGAAGAGAAAACCTGTCAGTGGCTCATCCATAGTATTTGCCTTTTCACAGAGCAGAGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp TCAGTTCAAACAACACACACACAGCTTACTAGGCAACAATATCATTaGATGGGTTACAACTCTGTCATCTTGCAGACCTTCAGACATGCT +
Preference number: 1 (lower is better)
Translates to: SVQTTHTQLTRQQYH*MGYNSVILQTFRHA
Trigger: AGCATGTCTGAAGGTCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCTGTGTGTGTGTTGTTTGAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp CACAGGAATGGCATTTTTGCACAATCAGAATGTCATGCAGATAGTTaGCAACAGGGGACTGAGAAATTACTGGTCCATTCTCTTCCATTT +
Preference number: 1 (lower is better)
Translates to: HRNGIFAQSECHADS*QQGTEKLLVHSLPF
Trigger: AAATGGAAGAGAATGGACCAGTAATTTCTCAGTCCCCTGTTGTCAACTATCTGCATGACATTCTGATTGTGCAAAAATGCCATTCCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 90 bp AACCACTCCATCAATGCTAACACATGTGTAGACAACATTTGGGTTTaGTGTCCGTTGGATAGGATTTTCACACATGGTATGGATTTCCAA +
Preference number: 1 (lower is better)
Translates to: NHSINANTCVDNIWV*CPLDRIFTHGMDFQ
Trigger: TTGGAAATCCATACCATGTGTGAAAATCCTATCCAACGGACAGCAAACCCAAATGTTGTCTACACATGTGTTAGCATTGATGGAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 90 bp ATACAAGAGACATGGCATCAGGTTAATTTATATTTATCACTTAATTaGATACATAGTGGAGCCATAGGAGGGGGACAGTTGCCTGGAATG +
Preference number: 1 (lower is better)
Translates to: IQETWHQVNLYLSLN*IHSGAIGGGQLPGM
Trigger: CATTCCAGGCAACTGTCCCCCTCCTATGGCTCCACTATGTATTCAATTAAGTGATAAATATAAATTAACCTGATGCCATGTCTCTTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp CATTATTTCTCTTGGCACAACAAAGAGACTTTTAGCAGCAGAATATaGCCAGCAATTGCTTACGGCGCAAGAAAGTTCAATTCCATTACT +
Preference number: 1 (lower is better)
Translates to: HYFSWHNKETFSSRI*PAIAYGARKFNSIT
Trigger: AGTAATGGAATTGAACTTTCTTGCGCCGTAAGCAATTGCTGGTCATATTCTGCTGCTAAAAGTCTCTTTGTTGTGCCAAGAGAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp TTCAAACAACACACACACAGCTTACTAGGCAACAATATCATTGAATaGGTTACAACTCTGTCATCTTGCAGACCTTCAGACATGCTATAT +
Preference number: 1 (lower is better)
Translates to: FKQHTHSLLGNNIIE*VTTLSSCRPSDMLY
Trigger: ATATAGCATGTCTGAAGGTCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCTGTGTGTGTGTTGTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp AAGAAACTTAGTCAGGAGGAAGAATCAGAGCTTGAGGGCTATCAATaGTCCAGTGGTTTTGTCTATGTTGAAAAATTGCTTAACTGTTCA +
Preference number: 1 (lower is better)
Translates to: KKLSQEEESELEGYQ*SSGFVYVEKLLNCS
Trigger: TGAACAGTTAAGCAATTTTTCAACATAGACAAAACCACTGGACCATTGATAGCCCTCAAGCTCTGATTCTTCCTCCTGACTAAGTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp AAAACTTTACAAGAACATATGAAGGCCCGACTCTCTTGCATACTCTaGAACTATGACCTGATAACTTCTGGTAACTTCATTCTTATCTCG +
Preference number: 1 (lower is better)
Translates to: KTLQEHMKARLSCIL*NYDLITSGNFILIS
Trigger: CGAGATAAGAATGAAGTTACCAGAAGTTATCAGGTCATAGTTTCAGAGTATGCAAGAGAGTCGGGCCTTCATATGTTCTTGTAAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 90 bp CCAAATATCCGTATGTTTGATATCATGAAGACCAAATTTACCACTTaGGTGATCTACTTGGCCACTTTTCATCAGGATATTTGCAGTCAT +
Preference number: 1 (lower is better)
Translates to: PNIRMFDIMKTKFTT*VIYLATFHQDICSH
Trigger: ATGACTGCAAATATCCTGATGAAAAGTGGCCAAGTAGATCACTCAAGTGGTAAATTTGGTCTTCATGATATCAAACATACGGATATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 90 bp ACTACAAAGATATCACTAAATATTCCCATGTTTGTGGTAACCAGTTaGTGCTTGGAAATTGGCATGACATCAACAAACCAAACCCAAAAA +
Preference number: 1 (lower is better)
Translates to: TTKISLNIPMFVVTS*CLEIGMTSTNQTQK
Trigger: TTTTTGGGTTTGGTTTGTTGATGTCATGCCAATTTCCAAGCACCAACTGGTTACCACAAACATGGGAATATTTAGTGATATCTTTGTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCGTACCCTCTGGTGGGTaGACCCAAGACCGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIVPSGG*TQDRAG
Trigger: TCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTAC...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGTAGTACCCTCTGGTaGGTGCACCCAAGACCGTGC +
Preference number: 2 (lower is better)
Translates to: ARAALPLCPNGRCTCLGISSTLW*VHPRPC
Trigger: GCACGGTCTTGGGTGCACCCACCAGAGGGTACTACT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCGCTCCTTGGTCTTGTTaGAAGCCGTACATGGGCTGC +
Preference number: 2 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIAPWSC*KPYMGC
Trigger: GCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGC...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCATCCAGCCCATTCCTCTaGCTCGCGCCGCACTGCCGT +
Preference number: 2 (lower is better)
Translates to: LSSPDILIAPLARFLGAPSSPFL*LAPHCR
Trigger: ACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGA...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCGTACCCTCTGGTGGGTaGACCCAAGACCGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: VARSLPESASAYGHTEPLVPSGG*TQDRAG
Trigger: TCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTAC...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGCGGGTGCAGCTGCTTTaGAAGGAGACCAGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLRVQLL*KETSRP
Trigger: GGGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCG...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCGCCGTTATGTCCCAATaGGCGCTGCACATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VARSLPESASAYGHTEPLAVMSQ*ALHMPG
Trigger: CCCAGGCATGTGCAGCGCCCATTGGGACATAACGGC...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGTGGCTCGCGCCGCACTaGCGTTATGTCCCAATGGGC +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLWLAPH*RYVPMG
Trigger: GCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCA...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCGTCATTCTTTCAGGTaGAGTCAGAGACTCTCGGGT +
Preference number: 2 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHRHSFR*SQRLSG
Trigger: ACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATACTCTCGGGTGCAGCTaGTTTGGAAGGAGACCAGCC +
Preference number: 2 (lower is better)
Translates to: GTESSRVSICLWSHRATHTLGCS*FGRRPA
Trigger: GGCTGGTCTCCTTCCAAAGCAGCTGCACCCGAGAGT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGGGGATGCCACTCGAATaGTCAGGGCATTTCACGGCC +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLGMPLE*SGHFTA
Trigger: GGCCGTGAAATGCCCTGAGCATTCGAGTGGCATCCC...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCTGTCACCCCTTCATCTaGATGTTGTGGGTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: VARSLPESASAYGHTEPLCHPFI*MLWVLQ
Trigger: TTGCAGGACCCACAACATCCAGATGAAGGGGTGACA...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAAGTAGTACCCTCTGGTaGGTGCACCCAAGACCGTGC +
Preference number: 2 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLASSTLW*VHPRPC
Trigger: GCACGGTCTTGGGTGCACCCACCAGAGGGTACTACT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCCCTGGCCAGGTTCCTaGGGGCACCAACTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICPWPGS*GHQLAK
Trigger: CTTTGCAAGTTGGTGCCCCCAGGAACCTGGCCAGGG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGATGTCCCAATGGGCGCTaGACATGCCTGGGAATCAGA +
Preference number: 2 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRCPNGR*TCLGIR
Trigger: TCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACA...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAATGCTGCCACCCAGGTaGCTATGTGAGGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREMLPPR*LCEEKG
Trigger: TCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCAT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATGGCGCTGCACATGCCTaGGAATCAGACTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: GTESSRVSICLWSHRATHGAAHA*ESDSHF
Trigger: AAAATGAGAGTCTGATTCCCAGGCATGTGCAGCGCC...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCTGTGGATGTCATCGTaGGGACACAGTCTCTGGATG +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLLWMSS*GHSLWM
Trigger: CATCCAGAGACTGTGTCCCCACGATGACATCCACAG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp AGTAGTACCCTCTGGTGGGTGCACCCAAGACCGTGCAGGAGGAGTTaGGTAGCAATGGAGAGTCCTATTAAGCCAGCGTCATTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: SSTLWWVHPRPCRRS*VAMESPIKPASFFQ
Trigger: CTGAAAGAATGACGCTGGCTTAATAGGACTCTCCATTGCTACCAAACTCCTCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp CCTGGCCAGGTTCCTGGGGGCACCAACTTGCAAAGTAGGGTGATCTaGCAAGAGACAAATGTTTTCAATCTGCTGAGGCAGGCTGATGGA +
Preference number: 2 (lower is better)
Translates to: PGQVPGGTNLQSRVI*QETNVFNLLRQADG
Trigger: TCCATCAGCCTGCCTCAGCAGATTGAAAACATTTGTCTCTTGCAAGATCACCCTACTTTGCAAGTTGGTGCCCCCAGGAACCTGGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTTTATGGCCACAGCCCTaGTGTCACCCCTTCATCTGG +
Preference number: 2 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFLWPQP*CHPFIW
Trigger: CCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAA...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACAGAGCCACTCATTCTaGGTCTGGAAACAGATCCGG +
Preference number: 2 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAQSHSF*VWKQIR
Trigger: CCGGATCTGTTTCCAGACGCAGAATGAGTGGCTCTG...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTTGTCACCCCTTCATCTaGATGTTGTGGGTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSCHPFI*MLWVLQ
Trigger: TTGCAGGACCCACAACATCCAGATGAAGGGGTGACA...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGATGAAGTGTCATTATaGCCACAGCCCTGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEDEVSL*PQPCCH
Trigger: GTGACAGCAGGGCTGTGGCCATAATGACACTTCATC...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGTTTTTATATTCCTGTaGGAATCAGAGCTTTGCATC +
Preference number: 2 (lower is better)
Translates to: APHCRYVPMGAAHAWESDVFIFL*ESELCI
Trigger: GATGCAAAGCTCTGATTCCCACAGGAATATAAAAAC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAACTTTGACCTTGGATTaGGGGGAGGAAAAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: LSSPDILIAPLARFLGAPTLTLD*GEEKSV
Trigger: TACAGACTTTTCCTCCCCCCAATCCAAGGTCAAAGT...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGTGGGGACACAGTCTCTaGATGACACACCCATTACAG +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLWGHSL*MTHPLQ
Trigger: CTGTAATGGGTGTGTCATCCAGAGACTGTGTCCCCA...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCAAGAGTCTCAGAAATaGGGGATAGAGCGGAATCGC +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLQESQK*GIERNR
Trigger: GCGATTCCGCTCTATCCCCCATTTCTGAGACTCTTG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGATGCCCTGCTCTAGGATaGAGTGTCATTATGGCCACA +
Preference number: 2 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRCPALG*SVIMAT
Trigger: TGTGGCCATAATGACACTTCATCCTAGAGCAGGGCA...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTAGTGGAGAACTTGATTaGTCGTTCTCTCGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSSGELD*SFSRLL
Trigger: AAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACT...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACGGGGAACGTTTACTTaGTGTACGGAGGTATTTAAA +
Preference number: 2 (lower is better)
Translates to: LSSPDILIAPLARFLGAPRGTFT*CTEVFK
Trigger: TTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTAATAGTAGTACCCTCTaGTGGGTGCACCCAAGACCG +
Preference number: 2 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFNSSTL*WVHPRP
Trigger: CGGTCTTGGGTGCACCCACCAGAGGGTACTACTATT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTAGTCCTGTGGTTGGATaGTGTTTGGCACTAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSSPVVG*CLALER
Trigger: CCTTTCTAGTGCCAAACACCATCCAACCACAGGACT...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGACCCATTACAGGTGGTaGCTAGAGAACTGGACTACT +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLTHYRW*LENWTT
Trigger: AGTAGTCCAGTTCTCTAGCCACCACCTGTAATGGGT...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCGGCACTTCTTCCATGTaGCTCTCTGCTGTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICGTSSM*LSAVRA
Trigger: TGCTCTCACAGCAGAGAGCCACATGGAAGAAGTGCC...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGTTATGGCCACAGCCCTaGTGTCACCCCTTCATCTGG +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQLWPQP*CHPFIW
Trigger: CCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAA...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATGACAACATTTGGGTTTaGTGTCCGTTGGATAGGATT +
Preference number: 2 (lower is better)
Translates to: GTESSRVSICLWSHRATHDNIWV*CPLDRI
Trigger: AATCCTATCCAACGGACAGCAAACCCAAATGTTGTC...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp GCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTaGGGCAAATTGCTTGACATCTCTAAGCCATTTACAGATTTTGTC +
Preference number: 2 (lower is better)
Translates to: AVLNPQPHCFLAVGP*GKLLDISKPFTDFV
Trigger: GACAAAATCTGTAAATGGCTTAGAGATGTCAAGCAATTTGCCCAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTACACAGTGGAGAACTTaGTTGCTCGTTCTCTCGCCT +
Preference number: 2 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVTQWRT*LLVLSP
Trigger: AGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTAACCATCCATCGTGGTaGGCTACTCTCAATGTGGGA +
Preference number: 2 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVNHPSW*ATLNVG
Trigger: TCCCACATTGAGAGTAGCTCACCACGATGGATGGTT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCACGGCTCACTGCCCTaGTCTAGGATGAAGTGTCAT +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQHGSLP*SRMKCH
Trigger: ATGACACTTCATCCTAGAGCAGGGCAGTGAGCCGTG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCAGAGCCACTCATTCTaGGTCTGGAAACAGATCCGG +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQQSHSF*VWKQIR
Trigger: CCGGATCTGTTTCCAGACGCAGAATGAGTGGCTCTG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGAATAGTAGTACCCTCTaGTGGGTGCACCCAAGACCG +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQNSSTL*WVHPRP
Trigger: CGGTCTTGGGTGCACCCACCAGAGGGTACTACTATT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCGTCAGTCCTGTGGTTaGATGGTGTTTGGCACTAGA +
Preference number: 2 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVRQSCG*MVFGTR
Trigger: TCTAGTGCCAAACACCATCCAACCACAGGACTGACG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTTCCACGTCAGTCCTGTaGTTGGATGGTGTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: RKSLYTVENLIARSLACFSTSVL*LDGVWH
Trigger: GTGCCAAACACCATCCAACCACAGGACTGACGTGGA...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGTCCACGTCAGTCCTGTaGTTGGATGGTGTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQSTSVL*LDGVWH
Trigger: GTGCCAAACACCATCCAACCACAGGACTGACGTGGA...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCTTTCCTGGGAAACATTaGCCAGTCTTGACAAGCCCT +
Preference number: 2 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICFPGKH*PVLTSP
Trigger: AGGGCTTGTCAAGACTGGCCAATGTTTCCCAGGAAA...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTTGTTGGTCTTATAGATaGACTGTAAGCTTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSCWSYR*TVSLGW
Trigger: CCAACCCAAGCTTACAGTCCATCTATAAGACCAACA...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp AGTGATGAAGAACCATTGTATTCTCTGCTTGGTGAGTTGTTGCTGTaGTATTCCTCAGACTCCACTTCCTCCGTGCTGCACACAGCTCTC +
Preference number: 2 (lower is better)
Translates to: SDEEPLYSLLGELLL*YSSDSTSSVLHTAL
Trigger: GAGAGCTGTGTGCAGCACGGAGGAAGTGGAGTCTGAGGAATACAACAGCAACAACTCACCAAGCAGAGAATACAATGGTTCTTCATCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTAAAGAAGTCCTAGGTTaGGCCCTCTGTTACTTCCTG +
Preference number: 2 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVKEVLG*ALCYFL
Trigger: CAGGAAGTAACAGAGGGCTCAACCTAGGACTTCTTT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTACCCAGGTGCCTATGTaGGGAGAAGGGATGCCACTC +
Preference number: 2 (lower is better)
Translates to: KECGNGGMNLEIMVPCNITQVPM*GEGMPL
Trigger: GAGTGGCATCCCTTCTCCTCACATAGGCACCTGGGT...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTCGTCATTCTTTCAGGTaGAGTCAGAGACTCTCGGGT +
Preference number: 2 (lower is better)
Translates to: RKSLYTVENLIARSLACFRHSFR*SQRLSG
Trigger: ACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACG...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCACTCATTCTGCGTCTaGAAACAGATCCGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQHSFCV*KQIRFQ
Trigger: CTGGAACCGGATCTGTTTCCAGACGCAGAATGAGTG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCTCTGTTACTTTAGTTaGAAAGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLLCYFS*KVCVCV
Trigger: CACACACACACACACTTTCCAACTAAAGTAACAGAG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGCTGAGGCAGAAGGATaGTGTGAACCTGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVAEAEG*CEPGRQ
Trigger: CTGCCTCCCAGGTTCACACCATCCTTCTGCCTCAGC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGAAACTATCACAGGGGGTaGGTTCCCCTAATGACAGAG +
Preference number: 2 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRNYHRG*VPLMTE
Trigger: CTCTGTCATTAGGGGAACCCACCCCCTGTGATAGTT...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAGGTTCTGCACAAAAGTaGAGAATTTGCCAAAATCGT +
Preference number: 2 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREGSAQK*RICQNR
Trigger: ACGATTTTGGCAAATTCTTCACTTTTGTGCAGAACC...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGTCGAGGCTGTAGATTaGGAGTCTTGCCACATGCCC +
Preference number: 2 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVVEAVD*ESCHMP
Trigger: GGGCATGTGGCAAGACTCTCAATCTACAGCCTCGAC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCATGGGAATCAGAGCTTTaGATCAAGAAAAGTCACCTA +
Preference number: 2 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAWESEL*IKKSHL
Trigger: TAGGTGACTTTTCTTGATGCAAAGCTCTGATTCCCA...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGAGAAGAGGTTCTCTTTaGTCAATTCAATCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLRRGSL*SIQSVQ
Trigger: CTGAACAGATTGAATTGAGCAAAGAGAACCTCTTCT...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCGATGAAGTGTCATTATaGCCACAGCCCTGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRDEVSL*PQPCCH
Trigger: GTGACAGCAGGGCTGTGGCCATAATGACACTTCATC...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACATGACCGAGGACACTaGGAACAGAAAGCGGGGAAC +
Preference number: 2 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRHDRGH*EQKAGN
Trigger: GTTCCCCGCTTTCTGTTCTCAGTGTCCTCGGTCATG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTTCTGCTGAGGCAGGCTaGTGGAATTTGTGGACCAGT +
Preference number: 2 (lower is better)
Translates to: KECGNGGMNLEIMVPCNISAEAG*WNLWTS
Trigger: ACTGGTCCACAAATTCCATCAGCCTGCCTCAGCAGA...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTACACGGCTCACTGCCCTaGTCTAGGATGAAGTGTCAT +
Preference number: 2 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVHGSLP*SRMKCH
Trigger: ATGACACTTCATCCTAGAGCAGGGCAGTGAGCCGTG...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTACAACTCTGTCATCTTaGAGACCTTCAGACATGCTA +
Preference number: 2 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVTTLSS*RPSDML
Trigger: TAGCATGTCTGAAGGTCTGCAAGATGACAGAGTTGT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGGGGTTTGCTGTCCGTTaGATAGGATTTTCACACATG +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQGFAVR*IGFSHM
Trigger: CATGTGTGAAAATCCTATCCAACGGACAGCAAACCC...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGGGTTTGCTGTCCGTTaGATAGGATTTTCACACATG +
Preference number: 2 (lower is better)
Translates to: RKSLYTVENLIARSLACFGFAVR*IGFSHM
Trigger: CATGTGTGAAAATCCTATCCAACGGACAGCAAACCC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp AACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGGGCAAATaGCTTGACATCTCTAAGCCATTTACAGATTTTGTCATCTGTAAA +
Preference number: 2 (lower is better)
Translates to: NPQPHCFLAVGPLGK*LDISKPFTDFVICK
Trigger: TTTACAGATGACAAAATCTGTAAATGGCTTAGAGATGTCAAGCAATTTGCCCAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGAAATGTGTAGAAAATaGACCACTCCATCAATGCTA +
Preference number: 2 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFEMCRK*TTPSML
Trigger: TAGCATTGATGGAGTGGTTCATTTTCTACACATTTC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTGTGCACCCAAGACCGTaGAGGAGGAGTTTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSVHPRP*RRSLVA
Trigger: TGCTACCAAACTCCTCCTGCACGGTCTTGGGTGCAC...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGGACAACATTTGGGTTTaGTGTCCGTTGGATAGGATT +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQDNIWV*CPLDRI
Trigger: AATCCTATCCAACGGACAGCAAACCCAAATGTTGTC...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTGTGAGGAGAAGGGATaGCACTCGAATGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSCEEKG*HSNAQG
Trigger: GCCCTGAGCATTCGAGTGGCATCCCTTCTCCTCACA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp TTTGGCACTTCTTCCATGTGGCTCTCTGCTGTGAGAGCAGGCTGCTaGCATGTTAGACTAATTGCTTCAATTAGCAAAATTAAATGGCTC +
Preference number: 2 (lower is better)
Translates to: FGTSSMWLSAVRAGC*HVRLIASISKIKWL
Trigger: GAGCCATTTAATTTTGCTAATTGAAGCAATTAGTCTAACATGCAAGCAGCCTGCTCTCACAGCAGAGAGCCACATGGAAGAAGTGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp GTTTTATATAGTGATGAAGAACCATTGTATTCTCTGCTTGGTGAGTaGTTGCTGTTGTATTCCTCAGACTCCACTTCCTCCGTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: VLYSDEEPLYSLLGE*LLLYSSDSTSSVLH
Trigger: GTGCAGCACGGAGGAAGTGGAGTCTGAGGAATACAACAGCAACAACTCACCAAGCAGAGAATACAATGGTTCTTCATCACTATATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGATGCCCTGCTCTAGGATaGAGTGTCATTATGGCCACA +
Preference number: 2 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRCPALG*SVIMAT
Trigger: TGTGGCCATAATGACACTTCATCCTAGAGCAGGGCA...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTACTGGGCCTTTACTGGTaGCTAGGTAATCTTTCCACA +
Preference number: 2 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVLGLYW*LGNLST
Trigger: TGTGGAAAGATTACCTAGTCACCAGTAAAGGCCCAG...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGTGGGAATCAGAGCTTTaGATCAAGAAAAGTCACCTA +
Preference number: 2 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQWESEL*IKKSHL
Trigger: TAGGTGACTTTTCTTGATGCAAAGCTCTGATTCCCA...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTCCAGAGTCAGCATCTaGCTATGGTCACACAGAGCC +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSSRVSI*LWSHRA
Trigger: GGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCTGTGTAGACAACATTTaGGTTTGCTGTCCGTTGGAT +
Preference number: 2 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRCVDNI*VCCPLD
Trigger: ATCCAACGGACAGCAAACCCAAATGTTGTCTACACA...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp GAGAAGCAACAGGATAGCCAATTCCACATAGAAATGGATCTCGGTTaGGAACTGCTAATGTCACCACCTAAGAAGGCAGGAATCAAATTA +
Preference number: 2 (lower is better)
Translates to: EKQQDSQFHIEMDLG*ELLMSPPKKAGIKL
Trigger: TAATTTGATTCCTGCCTTCTTAGGTGGTGACATTAGCAGTTCCAAACCGAGATCCATTTCTATGTGGAATTGGCTATCCTGTTGCTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp CTTGGCACAACAAAGAGACTTTTAGCAGCAGAATATGACCAGCAATaGCTTACGGCGCAAGAAAGTTCAATTCCATTACTTACAACACCG +
Preference number: 2 (lower is better)
Translates to: LGTTKRLLAAEYDQQ*LTAQESSIPLLTTP
Trigger: CGGTGTTGTAAGTAATGGAATTGAACTTTCTTGCGCCGTAAGCAATTGCTGGTCATATTCTGCTGCTAAAAGTCTCTTTGTTGTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGAGAGTCTTGCCACATaGCCATTTTTAGGACAGCAA +
Preference number: 2 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIESLAT*PFLGQQ
Trigger: TTGCTGTCCTAAAAATGGGCATGTGGCAAGACTCTC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGCTGTGAGAGCAGGCTaGTTGCATGTTAGACTAATT +
Preference number: 2 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVAVRAG*LHVRLI
Trigger: AATTAGTCTAACATGCAAGCAGCCTGCTCTCACAGC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTAAGAGGACTATTTATTaGTCCTATATTCCCACGATT +
Preference number: 2 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVKRTIY*SYIPTI
Trigger: AATCGTGGGAATATAGGAGCAATAAATAGTCCTCTT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGTTTTTATATTCCTGTaGGAATCAGAGCTTTGCATC +
Preference number: 2 (lower is better)
Translates to: RKSLYTVENLIARSLACFVFIFL*ESELCI
Trigger: GATGCAAAGCTCTGATTCCCACAGGAATATAAAAAC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR TCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTGGCAAGCACAAAATTTaGGACAATGCTCACCAACCC +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSGKHKI*DNAHQP
Trigger: GGGTTGGTGAGCATTGTCTCAAATTTTGTGCTTGCC...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACTTTTAGGGGGCTCATaGCACTCATTCTCAGTTGTT +
Preference number: 2 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRLLGGS*HSFSVV
Trigger: AACAACTGAGAATGAGTGGCATGAGCCCCCTAAAAG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTGCTGGTACACACATCTaGGATAGGACTCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSAGTHI*DRTHSD
Trigger: ATCACTGTGAGTCCTATCGCAGATGTGTGTACCAGC...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp GAACCTTGCTTAAGAGGACTATTTATTGCTCCTATATTCCCACGATaGGCCACCTCATTGTACATTACAGAGTATCTTTGTACCTATGTG +
Preference number: 2 (lower is better)
Translates to: EPCLRGLFIAPIFPR*ATSLYITEYLCTYV
Trigger: CACATAGGTACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAGCAATAAATAGTCCTCTTAAGCAAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp AGGAGGAAGAATCAGAGCTTGAGGGCTATCAATGGTCCAGTGGTTTaGTCTATGTTGAAAAATTGCTTAACTGTTCATTTCTTTCCACCT +
Preference number: 2 (lower is better)
Translates to: RRKNQSLRAINGPVV*SMLKNCLTVHFFPP
Trigger: AGGTGGAAAGAAATGAACAGTTAAGCAATTTTTCAACATAGACAAAACCACTGGACCATTGATAGCCCTCAAGCTCTGATTCTTCCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGATGTGTAGACAACATTTaGGTTTGCTGTCCGTTGGAT +
Preference number: 2 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRCVDNI*VCCPLD
Trigger: ATCCAACGGACAGCAAACCCAAATGTTGTCTACACA...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACTTGAGGGCTATCAATaGTCCAGTGGTTTTGTCTAT +
Preference number: 2 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTLEGYQ*SSGFVY
Trigger: ATAGACAAAACCACTGGACCATTGATAGCCCTCAAG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp TGCTTGCTATTATACATCTTGGTGATAACTACCAAGGTGATAGCTTaGGGAGGAGAAACATCTTCAAAACACAAGAAAAAGAATCCCTGC +
Preference number: 2 (lower is better)
Translates to: CLLLYILVITTKVIA*GGETSSKHKKKNPC
Trigger: GCAGGGATTCTTTTTCTTGTGTTTTGAAGATGTTTCTCCTCCCAAAGCTATCACCTTGGTAGTTATCACCAAGATGTATAATAGCAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTAAGCCGTACATGGGCTaGATAGGATTTCTGTCAAAA +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSKPYMG*IGFLSK
Trigger: TTTTGACAGAAATCCTATGCAGCCCATGTACGGCTT...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTCGGGGAACGTTTACTTaGTGTACGGAGGTATTTAAA +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSRGTFT*CTEVFK
Trigger: TTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCG...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR GCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTTCTTTAACAATCTGCTaGTTATATATGTGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: KECGNGGMNLEIMVPCNISLTIC*LYMWEA
Trigger: GGCTTCCCACATATATAAGCAGCAGATTGTTAAAGA...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACAGACAGTTGCCTGGAATaGAAGAATAGCATTTATCTG +
Preference number: 2 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTDSCLE*KNSIYL
Trigger: CAGATAAATGCTATTCTTCCATTCCAGGCAACTGTC...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACTATATTCCCACGATTaGCCACCTCATTGTACATTA +
Preference number: 2 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTLYSHD*PPHCTL
Trigger: TAATGTACAATGAGGTGGCCAATCGTGGGAATATAG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp ATCAATGCTAACACATGTGTAGACAACATTTGGGTTTGCTGTCCGTaGGATAGGATTTTCACACATGGTATGGATTTCCAAATGAGAAAA +
Preference number: 2 (lower is better)
Translates to: INANTCVDNIWVCCP*DRIFTHGMDFQMRK
Trigger: TTTTCTCATTTGGAAATCCATACCATGTGTGAAAATCCTATCCAACGGACAGCAAACCCAAATGTTGTCTACACATGTGTTAGCATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp AATCAGAGCTTGAGGGCTATCAATGGTCCAGTGGTTTTGTCTATGTaGAAAAATTGCTTAACTGTTCATTTCTTTCCACCTCCATTATTC +
Preference number: 2 (lower is better)
Translates to: NQSLRAINGPVVLSM*KNCLTVHFFPPPLF
Trigger: GAATAATGGAGGTGGAAAGAAATGAACAGTTAAGCAATTTTTCAACATAGACAAAACCACTGGACCATTGATAGCCCTCAAGCTCTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp GACTACAAAGATATCACTAAATATTCCCATGTTTGTGGTAACCAGTaGGTGCTTGGAAATTGGCATGACATCAACAAACCAAACCCAAAA +
Preference number: 2 (lower is better)
Translates to: DYKDITKYSHVCGNQ*VLGNWHDINKPNPK
Trigger: TTTTGGGTTTGGTTTGTTGATGTCATGCCAATTTCCAAGCACCAACTGGTTACCACAAACATGGGAATATTTAGTGATATCTTTGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACAGAAATGTGTAGAAAATaGACCACTCCATCAATGCTA +
Preference number: 2 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTEMCRK*TTPSML
Trigger: TAGCATTGATGGAGTGGTTCATTTTCTACACATTTC...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR TCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACAGTTCCTAGACTTATATaGTTGTTCAAGCTAGTGGTT +
Preference number: 2 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTVPRLI*LFKLVV
Trigger: AACCACTAGCTTGAACAATCATATAAGTCTAGGAAC...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTGGAGGATCAAATCATaGAGTACTAGGAAGTATGTC +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSWRIKS*STRKYV
Trigger: GACATACTTCCTAGTACTCCATGATTTGATCCTCCA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTAAGCATCTGAATGTCTaGATGAAAGGAGTTGTCTCA +
Preference number: 2 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSKHLNV*MKGVVS
Trigger: TGAGACAACTCCTTTCATCCAGACATTCAGATGCTT...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp TACTATTTAATTTACATCATGAAGTTATTGAGCTCCTTGGTCTTGTaGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: YYLIYIMKLLSSLVL*KAVHGLHRISVKKD
Trigger: ATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAATAACTTCATGATGTAAATTAAATAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp GATTACTATTTAATTTACATCATGAAGTTATTGAGCTCCTTGGTCTaGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: DYYLIYIMKLLSSLV*LKAVHGLHRISVKK
Trigger: CTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAATAACTTCATGATGTAAATTAAATAGTAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp AATCATGATTACTATTTAATTTACATCATGAAGTTATTGAGCTCCTaGGTCTTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTC +
Preference number: 2 (lower is better)
Translates to: NHDYYLIYIMKLLSS*VLLKAVHGLHRISV
Trigger: GACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAATAACTTCATGATGTAAATTAAATAGTAATCATGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 90 bp GGAGGAAAGGCTTTAGAGAAACAGCTCATGTTTATGTCCAGAAATTaGTTATTCCTAAATAACCAGTATGCTGGAGAAATACAGTTAGTG +
Preference number: 2 (lower is better)
Translates to: GGKALEKQLMFMSRN*LFLNNQYAGEIQLV
Trigger: CACTAACTGTATTTCTCCAGCATACTGGTTATTTAGGAATAACAAATTTCTGGACATAAACATGAGCTGTTTCTCTAAAGCCTTTCCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp AATAACCAGTATGCTGGAGAAATACAGTTAGTGAAGAATGCTTTCTaGAAAAATCAGAGAAGTCACCTATTGGAAAACTCTTCACTTTGG +
Preference number: 2 (lower is better)
Translates to: NNQYAGEIQLVKNAF*KNQRSHLLENSSLW
Trigger: CCAAAGTGAAGAGTTTTCCAATAGGTGACTTCTCTGATTTTTCAAGAAAGCATTCTTCACTAACTGTATTTCTCCAGCATACTGGTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp GTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTCTACTaGTCTTTTCATCTGTTTGGTGAAGAATCTAGACTCTGTCATTTC +
Preference number: 2 (lower is better)
Translates to: VMRCIAYISSTCCLY*SFHLFGEESRLCHF
Trigger: GAAATGACAGAGTCTAGATTCTTCACCAAACAGATGAAAAGACAAGTAGAGACAACATGTACTTGAGATATAAGCTATACATCTCATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 90 bp TCCCTAGTCATGTCATTTGTAACTCAGGCTCACACCATTTCTGCATaGAAGCTATCATGTAAAATGGCATTAATTATCATTACTAGAAAC +
Preference number: 2 (lower is better)
Translates to: SLVMSFVTQAHTISA*KLSCKMALIIITRN
Trigger: GTTTCTAGTAATGATAATTAATGCCATTTTACATGATAGCTTCAATGCAGAAATGGTGTGAGCCTGAGTTACAAATGACATGACTAGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCTCGGGTGCAGCTGCTTaGGAAGGAGACCAGCCGCCC +
Preference number: 3 (lower is better)
Translates to: RLETDPVPAHSSGSRRTASGAAA*EGDQPP
Trigger: GGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCGA...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 72 bp TCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTaGCGTTATGTCCCAATGGGCGCTGCACATGCCTGG +
Preference number: 3 (lower is better)
Translates to: SGSSPFLWLAPH*RYVPMGAAHAW
Trigger: CCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp TCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTaGAAGGAGACCAGCCGCCCCCAGCCGACAGGATCA +
Preference number: 3 (lower is better)
Translates to: SGGVRDSRVQLL*KETSRPQPTGS
Trigger: TGATCCTGTCGGCTGGGGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp GCGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTaGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGC +
Preference number: 3 (lower is better)
Translates to: ASGNRSGSSPFL*LAPHCRYVPMG
Trigger: GCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp TCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATaGGCGCTGCACATGCCTGGGAATCAGACTCTCATT +
Preference number: 3 (lower is better)
Translates to: SSGSRRTAVMSQ*ALHMPGNQTLI
Trigger: AATGAGAGTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp CACGAGAAGCTCTCCTGCAGAGCCCATAGGGACCAGTaGTCAAGGAGAACTATCACAGGGGGTGGGTTCCCC +
Preference number: 3 (lower is better)
Translates to: HEKLSCRAHRDQ*SRRTITGGGFP
Trigger: GGGGAACCCACCCCCTGTGATAGTTCTCCTTGACCACTGGTCCCTATGGGCTCTGCAGGAGAGCTTCTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCCCTTCATCTGGATGTaGTGGGTCCTGCAACTCCTT +
Preference number: 3 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHPFIWM*WVLQLL
Trigger: AAGGAGTTGCAGGACCCACAACATCCAGATGAAGGG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 72 bp GGGAAGAGTCACTGGGCTCCCAGAAGTCGCAGTTGTTaGAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCC +
Preference number: 3 (lower is better)
Translates to: GKSHWAPRSRSC*KLCSTLSPTVS
Trigger: GGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAACAACTGCGACTTCTGGGAGCCCAGTGACTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp ATGCTGCCACCCAGGTGCCTATGTGAGGAGAAGGGATaGCACTCGAATGCTCAGGGCATTTCACGGCCTGTT +
Preference number: 3 (lower is better)
Translates to: MLPPRCLCEEKG*HSNAQGISRPV
Trigger: AACAGGCCGTGAAATGCCCTGAGCATTCGAGTGGCATCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp ACTAGGAACTTCACGGCTCACTGCCCTGCTCTAGGATaGAGTGTCATTATGGCCACAGCCCTGCTGTCACCC +
Preference number: 3 (lower is better)
Translates to: TRNFTAHCPALG*SVIMATALLSP
Trigger: GGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGGCAGTGAGCCGTGAAGTTCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 72 bp GCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATaGCTGGGAATCAGACTCTCATTTTGCCTTTTTCCC +
Preference number: 3 (lower is better)
Translates to: AALPLCPNGRCT*LGIRLSFCLFP
Trigger: GGGAAAAAGGCAAAATGAGAGTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp CTGCCTATGGTCACACAGAGCCACTCATTCTGCGTCTaGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: LPMVTQSHSFCV*KQIRFQPIPLA
Trigger: AGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACGCAGAATGAGTGGCTCTGTGTGACCATAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATAGCTCCTTGGTCTTGTaGAAAGCCGTACATGGGCTG +
Preference number: 3 (lower is better)
Translates to: GTESSRVSICLWSHRATHSSLVL*KAVHGL
Trigger: CAGCCCATGTACGGCTTTCAACAAGACCAAGGAGCT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCTTGAGCTCCTTGGTCTaGTTGAAAGCCGTACATGGG +
Preference number: 3 (lower is better)
Translates to: VARSLPESASAYGHTEPLLSSLV*LKAVHG
Trigger: CCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAA...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 72 bp TCCTGTGGATGTCATCGTGGGGACACAGTCTCTGGATaGCACACCCATTACAGGTGGTGGCTAGAGAACTGG +
Preference number: 3 (lower is better)
Translates to: SCGCHRGDTVSG*HTHYRWWLENW
Trigger: CCAGTTCTCTAGCCACCACCTGTAATGGGTGTGTCATCCAGAGACTGTGTCCCCACGATGACATCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp GAAAGGAGTGGCACGGAGTCTTCCAGAGTCAGCATCTaGCTATGGTCACACAGAGCCACTCATTCTGCGTCT +
Preference number: 3 (lower is better)
Translates to: ERSGTESSRVSI*LWSHRATHSAS
Trigger: AGACGCAGAATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCACTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 72 bp CACAACAACTTCAGTGGTCTGATGCTGCCACCCAGGTaGCTATGTGAGGAGAAGGGATGCCACTCGAATGCT +
Preference number: 3 (lower is better)
Translates to: HNNFSGLMLPPR*LCEEKGCHSNA
Trigger: AGCATTCGAGTGGCATCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCATCAGACCACTGAAGTTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 72 bp AGTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATaGTCACACAGAGCCACTCATTCTGCGTCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: SGTESSRVSICL*SHRATHSASGN
Trigger: GTTTCCAGACGCAGAATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp CTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTaGATGGTGTTTGGCACTAGAAAGGAGTGGCACGGA +
Preference number: 3 (lower is better)
Translates to: LSCLGLPRQSCG*MVFGTRKEWHG
Trigger: TCCGTGCCACTCCTTTCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTTGAGCTCCTTGGTCTaGTTGAAAGCCGTACATGGG +
Preference number: 3 (lower is better)
Translates to: GTESSRVSICLWSHRATHLSSLV*LKAVHG
Trigger: CCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAA...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATTACATCATGAAGTTATaGAGCTCCTTGGTCTTGTTG +
Preference number: 3 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHYIMKL*SSLVLL
Trigger: CAACAAGACCAAGGAGCTCAATAACTTCATGATGTA...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp CTTTTAGGGGGCTCATGCCACTCATTCTCAGTTGTTTaGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGT +
Preference number: 3 (lower is better)
Translates to: LLGGSCHSFSVV*GFHVSPVVGWC
Trigger: ACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAGTGGCATGAGCCCCCTAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 72 bp AATAGTAGTACCCTCTGGTGGGTGCACCCAAGACCGTaGAGGAGGAGTTTGGTAGCAATGGAGAGTCCTATT +
Preference number: 3 (lower is better)
Translates to: NSSTLWWVHPRP*RRSLVAMESPI
Trigger: AATAGGACTCTCCATTGCTACCAAACTCCTCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTACTACTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp TGGAGAGTCCTATTAAGCCAGCGTCATTCTTTCAGGTaGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: WRVLLSQRHSFR*SQRLSGAAALE
Trigger: TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTGGCTTAATAGGACTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp TACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTaGATGACACACCCATTACAGGTGGTGGCTAGAGAA +
Preference number: 3 (lower is better)
Translates to: YFLWMSSWGHSL*MTHPLQVVARE
Trigger: TTCTCTAGCCACCACCTGTAATGGGTGTGTCATCCAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCTCATTCTCAGTTGTTaGGGGCTTCCACGTCAGTCC +
Preference number: 3 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVLILSC*GLPRQS
Trigger: GGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp TCCAGCACTAGGTGCGCAGTAAACCATCCATCGTGGTaGGCTACTCTCAATGTGGGAGATGGAACCATAAGA +
Preference number: 3 (lower is better)
Translates to: SSTRCAVNHPSW*ATLNVGDGTIR
Trigger: TCTTATGGTTCCATCTCCCACATTGAGAGTAGCTCACCACGATGGATGGTTTACTGCGCACCTAGTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp ATTTCAGGGCTTGCGCCAAGAGCTAGTTCTGAAAACTaGCTCGCCGTGATGCTAGTGCTGATAACTGGGAAG +
Preference number: 3 (lower is better)
Translates to: ISGLAPRASSEN*LAVMLVLITGK
Trigger: CTTCCCAGTTATCAGCACTAGCATCACGGCGAGTCAGTTTTCAGAACTAGCTCTTGGCGCAAGCCCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp CTTATATATGTGGGAAGCCAATCACTCAGGAGAGAATaGAATCGGGTCCAAAGCCAGTGTGGGTTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: LIYVGSQSLRRE*NRVQSQCGFPQ
Trigger: CTGGGGAAACCCACACTGGCTTTGGACCCGATTGCATTCTCTCCTGAGTGATTGGCTTCCCACATATATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp TGCTGTTGTATTCCTCAGACTCCACTTCCTCCGTGCTaGACACAGCTCTCTTCTGTTAATGCCAGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: CCCIPQTPLPPC*TQLSSVNASSQ
Trigger: CTGAGAACTGGCATTAACAGAAGAGAGCTGTGTGCAGCACGGAGGAAGTGGAGTCTGAGGAATACAACAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp AGAACTGCCAAGATGATCATTCAGGTCCAGGCACTGTaGTCATACTGGGGGAAATGTCTACACCGTTCCCTA +
Preference number: 3 (lower is better)
Translates to: RTAKMIIQVQAL*SYWGKCLHRSL
Trigger: TAGGGAACGGTGTAGACATTTCCCCCAGTATGAGCACAGTGCCTGGACCTGAATGATCATCTTGGCAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGTGGTTGGATGGTGTTaGGCACTAGAAAGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: RKSLYTVENLIARSLACFVVGWC*ALERSG
Trigger: GCCACTCCTTTCTAGTGCCAAACACCATCCAACCAC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGCCACTCATTCTCAGTaGTTTGGGGCTTCCACGTCA +
Preference number: 3 (lower is better)
Translates to: RKSLYTVENLIARSLACFATHSQ*FGASTS
Trigger: TGACGTGGAAGCCCCAAACAACTGAGAATGAGTGGC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR TCA 72 bp TGCCGAGACAAAGGAACGTTGATCTGCATCTGTCACTaGAATTATAGGAATGACCACCCCAGTCCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: CRDKGTLICICH*NYRNDHPSPPV
Trigger: CACAGGAGGACTGGGGTGGTCATTCCTATAATTTCAGTGACAGATGCAGATCAACGTTCCTTTGTCTCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp GATAAGACATATGTCAACACAACAACTTCAGTGGTCTaGTGCTGCCACCCAGGTGCCTATGTGAGGAGAAGG +
Preference number: 3 (lower is better)
Translates to: DKTYVNTTTSVV*CCHPGAYVRRR
Trigger: CCTTCTCCTCACATAGGCACCTGGGTGGCAGCATCAGACCACTGAAGTTGTTGTGTTGACATATGTCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp TGTTGCTGTTGTATTCCTCAGACTCCACTTCCTCCGTaGTGCACACAGCTCTCTTCTGTTAATGCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: CCCCIPQTPLPP*CTQLSSVNASS
Trigger: AGAACTGGCATTAACAGAAGAGAGCTGTGTGCAGCACGGAGGAAGTGGAGTCTGAGGAATACAACAGCAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp TATGGTACTGTAGTACATCAAATACTCCACACACTGTaGTTCAAACTAGGGCACTGGGGGTCACTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: YGTVVHQILHTL*FKLGHWGSLPA
Trigger: AGCAGGCAGTGACCCCCAGTGCCCTAGTTTGAAGCACAGTGTGTGGAGTATTTGATGTACTACAGTACCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 72 bp GAGGCAAAATTTTTCCATAATAGTAGTACCCTCTGGTaGGTGCACCCAAGACCGTGCAGGAGGAGTTTGGTA +
Preference number: 3 (lower is better)
Translates to: EAKFFHNSSTLW*VHPRPCRRSLV
Trigger: TACCAAACTCCTCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTACTACTATTATGGAAAAATTTTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp TTGGAGGCAAAATTTTTCCATAATAGTAGTACCCTCTaGTGGGTGCACCCAAGACCGTGCAGGAGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: LEAKFFHNSSTL*WVHPRPCRRSL
Trigger: CAAACTCCTCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTACTACTATTATGGAAAAATTTTGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTTGGGTTTGCTGTCCGTaGGATAGGATTTTCACACAT +
Preference number: 3 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFWVCCP*DRIFTH
Trigger: ATGTGTGAAAATCCTATCCAACGGACAGCAAACCCA...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAAATCAGACTCTCATTTaGCCTTTTTCCCCACTTCCT +
Preference number: 3 (lower is better)
Translates to: CHAAQCCSSGHWRKGFRENQTLI*PFSPLP
Trigger: AGGAAGTGGGGAAAAAGGCAAAATGAGAGTCTGATT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCAGAAGAGGTTCTCTTaGCTCAATTCAATCTGTTCA +
Preference number: 3 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLQKRFS*LNSICS
Trigger: TGAACAGATTGAATTGAGCAAAGAGAACCTCTTCTG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGACATTGTGTCAGAACTaGTTTCCAATCAACGGCATT +
Preference number: 3 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLTLCQN*FPINGI
Trigger: AATGCCGTTGATTGGAAACAAGTTCTGACACAATGT...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACTAGCTGTGGGACCTTaGGGCAAATTGCTTGACATC +
Preference number: 3 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRLAVGP*GKLLDI
Trigger: GATGTCAAGCAATTTGCCCAAAGGTCCCACAGCTAG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTAAGTTATTGAGCTCCTaGGTCTTGTTGAAAGCCGTA +
Preference number: 3 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFKLLSS*VLLKAV
Trigger: TACGGCTTTCAACAAGACCAAGGAGCTCAATAACTT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR-3UTR CAA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACCGTGCAGGAGGAGTTaGGTAGCAATGGAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTPCRRS*VAMESP
Trigger: AGGACTCTCCATTGCTACCAAACTCCTCCTGCACGG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp GTCATCTCTTGTTTAGCAGAATATAGGCCTCAAGGTTaGCAAAAGCTTTACATTTGGGGGCCAGGTCACTGC +
Preference number: 3 (lower is better)
Translates to: VISCLAEYRPQG*QKLYIWGPGHC
Trigger: GCAGTGACCTGGCCCCCAAATGTAAAGCTTTTGTCAACCTTGAGGCCTATATTCTGCTAAACAAGAGATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp TTAAAGCAAGTCTCCACGACCCAGTACTCCGTTCTCTaGGCTATGCAAGCCCCCGGGAATATTTTTCTTTTT +
Preference number: 3 (lower is better)
Translates to: LKQVSTTQYSVL*AMQAPGNIFLF
Trigger: AAAAAGAAAAATATTCCCGGGGGCTTGCATAGCTCAGAGAACGGAGTACTGGGTCGTGGAGACTTGCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp TGCTCTGTGAAAAGGCAAATACTATGGATGAGCCACTaGCAGGTTTTCTCTTCATCACCATACTTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: CSVKRQILWMSH*QVFSSSPYLGL
Trigger: GAGGCCCAAGTATGGTGATGAAGAGAAAACCTGTCAGTGGCTCATCCATAGTATTTGCCTTTTCACAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp GAGGACACTGAGAACAGAAAGCGGGGAACGTTTACTTaGTGTACGGAGGTATTTAAAACCCAGAAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: EDTENRKRGTFT*CTEVFKTQKLV
Trigger: AACAAGCTTCTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTCAGTGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 72 bp CAAGGTTCTCATCCAAGAATAGCTATGGTCTCTTTCTaGGCTCTTTACCAAAGAAAGGCTTCAGCTGGGATC +
Preference number: 3 (lower is better)
Translates to: QGSHPRIAMVSF*ALYQRKASAGI
Trigger: GATCCCAGCTGAAGCCTTTCTTTGGTAAAGAGCGCAGAAAGAGACCATAGCTATTCTTGGATGAGAACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTAAAAATGACATTGGATaGCCGAGACAAAGGAACGTT +
Preference number: 3 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVKNDIG*PRQRNV
Trigger: AACGTTCCTTTGTCTCGGCAATCCAATGTCATTTTT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACGGAATCGCCCATCCTaGGCCATTTTGAAACACTGG +
Preference number: 3 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRRNRPS*AILKHW
Trigger: CCAGTGTTTCAAAATGGCCAAGGATGGGCGATTCCG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp TTTTCTCTGGAAATCCCCTCAATATCTTTGCATAGTTaGATACCTTTCCGTACTCTGTGTGCCTGCTCACGG +
Preference number: 3 (lower is better)
Translates to: FSLEIPSISLHS*IPFRTLCACSR
Trigger: CCGTGAGCAGGCACACAGAGTACGGAAAGGTATTCAACTATGCAAAGATATTGAGGGGATTTCCAGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp CAGTGGCCTCCCGCGAATAAAGACACACTTACAATCTaGACGCTAAAGGGATGTTTGGATACATGGAATTTG +
Preference number: 3 (lower is better)
Translates to: QWPPANKDTLTI*TLKGCLDTWNL
Trigger: CAAATTCCATGTATCCAAACATCCCTTTAGCGTTCAGATTGTAAGTGTGTCTTTATTCGCGGGAGGCCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp TTGCTAAGTGAATGCAACAGCGCTCAACACACAAAGTaGTCATTTTCTAGACTCACAATGGCAATGCTGGTG +
Preference number: 3 (lower is better)
Translates to: LLSECNSAQHTK*SFSRLTMAMLV
Trigger: CACCAGCATTGCCATTGTGAGTCTAGAAAATGAGCACTTTGTGTGTTGAGCGCTGTTGCATTCACTTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTGAGAACTGGACTACTTaGTGTGAATTAGATCCAAAT +
Preference number: 3 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVENWTT*CELDPN
Trigger: ATTTGGATCTAATTCACACAAAGTAGTCCAGTTCTC...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGTGAGAGCAGGCTGCTaGCATGTTAGACTAATTGCT +
Preference number: 3 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIVRAGC*HVRLIA
Trigger: AGCAATTAGTCTAACATGCAAGCAGCCTGCTCTCAC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACAACAAAAGCTTTACATTaGGGGGCCAGGTCACTGCCT +
Preference number: 3 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTTKALH*GARSLP
Trigger: AGGCAGTGACCTGGCCCCCAAATGTAAAGCTTTTGT...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGATCTTCATCACCATACTaGGGCCTCTACATTAATAGA +
Preference number: 3 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRSSSPY*GLYINR
Trigger: TCTATTAATGTAGAGGCCCAAGTATGGTGATGAAGA...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp ACTACGGCTGAACGGAAGTGCTCCTTTTTCACTAACTaGTTAATGTTCCCTTGCAGGAGCTTGGTTACAATA +
Preference number: 3 (lower is better)
Translates to: TTAERKCSFFTN*LMFPCRSLVTI
Trigger: TATTGTAACCAAGCTCCTGCAAGGGAACATTAATCAGTTAGTGAAAAAGGAGCACTTCCGTTCAGCCGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp AATGTTTACAAAGTAAAAGCACAAGAACTGCCAAGATaGTCATTCAGGTCCAGGCACTGTGCTCATACTGGG +
Preference number: 3 (lower is better)
Translates to: NVYKVKAQELPR*SFRSRHCAHTG
Trigger: CCCAGTATGAGCACAGTGCCTGGACCTGAATGATCATCTTGGCAGTTCTTGTGCTTTTACTTTGTAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 72 bp CACACACACAGCTTACTAGGCAACAATATCATTGAATaGGTTACAACTCTGTCATCTTGCAGACCTTCAGAC +
Preference number: 3 (lower is better)
Translates to: HTHSLLGNNIIE*VTTLSSCRPSD
Trigger: GTCTGAAGGTCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCTGTGTGTGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGATTTTCAAAAATGACATaGGATTGCCGAGACAAAGGA +
Preference number: 3 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRFSKMT*DCRDKG
Trigger: TCCTTTGTCTCGGCAATCCAATGTCATTTTTGAAAA...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTATACAACTCTGTCATCTaGCAGACCTTCAGACATGCT +
Preference number: 3 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVYNSVI*QTFRHA
Trigger: AGCATGTCTGAAGGTCTGCAAGATGACAGAGTTGTA...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp TTTAGAATGAGTAATGATACTGTCGAGGCTGTAGATTaGGAGTCTTGCCACATGCCCATTTTTAGGACAGCA +
Preference number: 3 (lower is better)
Translates to: FRMSNDTVEAVD*ESCHMPIFRTA
Trigger: TGCTGTCCTAAAAATGGGCATGTGGCAAGACTCTCAATCTACAGCCTCGACAGTATCATTACTCATTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp GGCATTTTTGCACAATCAGAATGTCATGCAGATAGTTaGCAACAGGGGACTGAGAAATTACTGGTCCATTCT +
Preference number: 3 (lower is better)
Translates to: GIFAQSECHADS*QQGTEKLLVHS
Trigger: AGAATGGACCAGTAATTTCTCAGTCCCCTGTTGTCAACTATCTGCATGACATTCTGATTGTGCAAAAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 72 bp CACTCCATCAATGCTAACACATGTGTAGACAACATTTaGGTTTGCTGTCCGTTGGATAGGATTTTCACACAT +
Preference number: 3 (lower is better)
Translates to: HSINANTCVDNI*VCCPLDRIFTH
Trigger: ATGTGTGAAAATCCTATCCAACGGACAGCAAACCCAAATGTTGTCTACACATGTGTTAGCATTGATGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CCA 72 bp AGTCAGGAGGAAGAATCAGAGCTTGAGGGCTATCAATaGTCCAGTGGTTTTGTCTATGTTGAAAAATTGCTT +
Preference number: 3 (lower is better)
Translates to: SQEEESELEGYQ*SSGFVYVEKLL
Trigger: AAGCAATTTTTCAACATAGACAAAACCACTGGACCATTGATAGCCCTCAAGCTCTGATTCTTCCTCCTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACAGACTGTAAGCTTGGGTaGGTTTTGAAAAAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTDCKLG*VLKKEQ
Trigger: CTGCTCCTTTTTCAAAACCAACCCAAGCTTACAGTC...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACATCTCAGACTTTCCTaGTGGGAGGTGAATTTTCCT +
Preference number: 3 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTHLRLS*WEVNFP
Trigger: AGGAAAATTCACCTCCCACAAGGAAAGTCTGAGATG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTTACATCATGAAGTTATaGAGCTCCTTGGTCTTGTTG +
Preference number: 3 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIYIMKL*SSLVLL
Trigger: CAACAAGACCAAGGAGCTCAATAACTTCATGATGTA...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp CAAGAACATATGAAGGCCCGACTCTCTTGCATACTCTaGAACTATGACCTGATAACTTCTGGTAACTTCATT +
Preference number: 3 (lower is better)
Translates to: QEHMKARLSCIL*NYDLITSGNFI
Trigger: AATGAAGTTACCAGAAGTTATCAGGTCATAGTTTCAGAGTATGCAAGAGAGTCGGGCCTTCATATGTTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp ATCCAGAAACACCAGACACCCAGACGGAAAACTGTATaGTTCAAACATCTCGACTTTTCCAAATATCCGTAT +
Preference number: 3 (lower is better)
Translates to: IQKHQTPRRKTV*FKHLDFSKYPY
Trigger: ATACGGATATTTGGAAAAGTCGAGATGTTTGAATCATACAGTTTTCCGTCTGGGTGTCTGGTGTTTCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp ATCAATGCTAACACATGTGTAGACAACATTTGGGTTTaGTGTCCGTTGGATAGGATTTTCACACATGGTATG +
Preference number: 3 (lower is better)
Translates to: INANTCVDNIWV*CPLDRIFTHGM
Trigger: CATACCATGTGTGAAAATCCTATCCAACGGACAGCAAACCCAAATGTTGTCTACACATGTGTTAGCATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR GCA 72 bp TCACTAAATATTCCCATGTTTGTGGTAACCAGTTGGTaGTTGGAAATTGGCATGACATCAACAAACCAAACC +
Preference number: 3 (lower is better)
Translates to: SLNIPMFVVTSW*LEIGMTSTNQT
Trigger: GGTTTGGTTTGTTGATGTCATGCCAATTTCCAAGCACCAACTGGTTACCACAAACATGGGAATATTTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGACTCGCTAAGGAACTaGAATTATTCTGTACTCATA +
Preference number: 3 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIDSLRN*NYSVLI
Trigger: TATGAGTACAGAATAATTCAAGTTCCTTAGCGAGTC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACTCACGGTGAATCATTaGTATCATGTTCTGCAACAT +
Preference number: 3 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTLTVNH*YHVLQH
Trigger: ATGTTGCAGAACATGATACAAATGATTCACCGTGAG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp TTTTCTAGACTCACAATGGCAATGCTGGTGTTAAGATaGGTTCTACTGGTGTGCGATCAAAATAGGAATTTT +
Preference number: 3 (lower is better)
Translates to: FSRLTMAMLVLR*VLLVCDQNRNF
Trigger: AAAATTCCTATTTTGATCGCACACCAGTAGAACGCATCTTAACACCAGCATTGCCATTGTGAGTCTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTTTTCATCAGGATATTaGCAGTCATGTGGACAGTCT +
Preference number: 3 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSFSSGY*QSCGQS
Trigger: AGACTGTCCACATGACTGCAAATATCCTGATGAAAA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTGGATATTCTCTGATGTaGTTTTCACACTGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSGYSLM*FSHCVL
Trigger: AAGGACACAGTGTGAAAACAACATCAGAGAATATCC...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp ACCAAAAGATTAGACAGAAAACTTTACAAGAACATATaGAGGCCCGACTCTCTTGCATACTCTGAAACTATG +
Preference number: 3 (lower is better)
Translates to: TKRLDRKLYKNI*RPDSLAYSETM
Trigger: CATAGTTTCAGAGTATGCAAGAGAGTCGGGCCTTCATATGTTCTTGTAAAGTTTTCTGTCTAATCTTTTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp AAGAAACCTCTGGCTCATTGGTTGCTGTCTTTGTTCTaGGAATGGGAAAAATGTAATTTGCATATCCTTCAT +
Preference number: 3 (lower is better)
Translates to: KKPLAHWLLSLF*EWEKCNLHILH
Trigger: ATGAAGGATATGCAAATTACATTTTTCCCATTCTCAGAACAAAGACAGCAACCAATGAGCCAGAGGTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp TTTAACAACATTTTTGTCATAGCCCTAAATTCAGCGTaGTATTTGGTTTCAAAGAGAGAAGAAACCTCTGGC +
Preference number: 3 (lower is better)
Translates to: FNNIFVIALNSA*YLVSKREETSG
Trigger: GCCAGAGGTTTCTTCTCTCTTTGAAACCAAATAGCACGCTGAATTTAGGGCTATGACAAAAATGTTGTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 72 bp ATATCACTAAATATTCCCATGTTTGTGGTAACCAGTTaGTGCTTGGAAATTGGCATGACATCAACAAACCAA +
Preference number: 3 (lower is better)
Translates to: ISLNIPMFVVTS*CLEIGMTSTNQ
Trigger: TTGGTTTGTTGATGTCATGCCAATTTCCAAGCACCAACTGGTTACCACAAACATGGGAATATTTAGTGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CCA 72 bp ATCCTTGCCATTTGGGAGCAGGTTTATATTGTGCAATaGTTTCATGCTAAGCACGATGTTTCTATTTTTCTA +
Preference number: 3 (lower is better)
Translates to: ILAIWEQVYIVQ*FHAKHDVSIFL
Trigger: TAGAAAAATAGAAACATCGTGCTTAGCATGAAACCATTGCACAATATAAACCTGCTCCCAAATGGCAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR TCA 72 bp CGTATGTTTGATATCATGAAGACCAAATTTACCACTTaGGTGATCTACTTGGCCACTTTTCATCAGGATATT +
Preference number: 3 (lower is better)
Translates to: RMFDIMKTKFTT*VIYLATFHQDI
Trigger: AATATCCTGATGAAAAGTGGCCAAGTAGATCACTCAAGTGGTAAATTTGGTCTTCATGATATCAAACATACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR GCA 72 bp ATTTGCAAGATTAAAGTGTCTGTTGAATTAATTAACTaGAAATCACCTCCAGTAAAGCTTGACAAGCTCCAA +
Preference number: 3 (lower is better)
Translates to: ICKIKVSVELIN*KSPPVKLDKLQ
Trigger: TTGGAGCTTGTCAAGCTTTACTGGAGGTGATTTGCAGTTAATTAATTCAACAGACACTTTAATCTTGCAAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCGCCGCCTGGCTGCCTaGGCGGAGCCAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTARRLAA*AEPSCS
Trigger: CGAGCAGCTTGGCTCCGCGCAGGCAGCCAGGCGGCG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCAGCGCCGCTGCTCCCTaGCCAGGCGCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTASAAAP*PGAGTA
Trigger: CGCTGTGCCTGCGCCTGGGCAGGGAGCAGCGGCGCT...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCAATCGGCTCCAGGCTaGGGGCAGCTGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAQSAPG*GQLEAA
Trigger: TGCTGCCTCCAGCTGCCCGCAGCCTGGAGCCGATTG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCGGGTGCAGCTGCTTTaGAAGGAGACCAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTARVQLL*KETSRP
Trigger: GGGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCCACGAAGAAGAGCGTaGGCCCGAACCACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAPRRRA*ARTTSA
Trigger: AGCGCTGGTGGTTCGGGCTCACGCTCTTCTTCGTGG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCCTGGAGCCAATCCCTaGACCGAGCCCGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHPGANP*TEPEWS
Trigger: GGACCACTCGGGCTCGGTGCAGGGATTGGCTCCAGG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCGCCGACCACCGTCTTaGAATCGGCTCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHRRPPS*NRLQAA
Trigger: CGCAGCCTGGAGCCGATTGCAAGACGGTGGTCGGCG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTGCACCGAGCCCGAGTaGTCCGAGTTCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDCTEPE*SEFCSG
Trigger: CCCGCTGCAGAACTCGGACCACTCGGGCTCGGTGCA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATTCCAGCCCATTCCTCTaGCTCGCGCCGCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHSSPFL*LAPHCR
Trigger: ACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGA...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCCCTGGCGGCGATGGTaGAGAAGTGCCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIPWRRW*RSASRT
Trigger: AGTTCTGCTGGCACTTCTTCACCATCGCCGCCAGGG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCAGGACGCAGACCTGTaGTTGCCACTGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHQDADL*LPLARV
Trigger: TACCCGGGCCAGTGGCAAGCACAGGTCTGCGTCCTG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCGTACCCTCTGGTGGGTaGACCCAAGACCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAVPSGG*TQDRAG
Trigger: TCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTAC...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCCCTGGCCAGGTTCCTaGGGGCACCAACTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIPWPGS*GHQLAK
Trigger: CTTTGCAAGTTGGTGCCCCCAGGAACCTGGCCAGGG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGAGCGCCGCTGCTCCCTaGCCAGGCGCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLSAAAP*PGAGTA
Trigger: CGCTGTGCCTGCGCCTGGGCAGGGAGCAGCGGCGCT...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCACTGCAGGAGCCAGATaGAGAAGGAGCAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGITAGAR*RRSRTQ
Trigger: CTGCGTCCTGCTCCTTCTGCATCTGGCTCCTGCAGT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCACTCTCGGGTGCAGCTaGTTTGGAAGGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGITLGCS*FGRRPA
Trigger: GGCTGGTCTCCTTCCAAAGCAGCTGCACCCGAGAGT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGCTTGTGGCCACGTCTaGGGGCAAAGTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDACGHV*GQSEGS
Trigger: GCTGCCTTCACTTTGCCCCCAGACGTGGCCACAAGC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCGGGTGGATGGGGCAGTaGGCCTCACTTGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIGWMGQ*ASLERQ
Trigger: CTGTCTTTCAAGTGAGGCCCACTGCCCCATCCACCC...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCGTTATGTCCCAATaGGCGCTGCACATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHAVMSQ*ALHMPG
Trigger: CCCAGGCATGTGCAGCGCCCATTGGGACATAACGGC...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCGGTCCAAAGCCAGTGTaGGTTTCCCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAGPKPV*VSPGSW
Trigger: CCAGCTTCCTGGGGAAACCCACACTGGCTTTGGACC...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCACAAGCACAACTTGGTaGCTGCCCGAATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTATSTTW*LPESGS
Trigger: GGACCCAGATTCGGGCAGTCACCAAGTTGTGCTTGT...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCTGAGGGTGAGTTTCTaGGGCTGGAGAGATGGACCA +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGILRVSF*GWRDGP
Trigger: TGGTCCATCTCTCCAGCCTCAGAAACTCACCCTCAG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACAATCGGCTCCAGGCTaGGGGCAGCTGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPQSAPG*GQLEAA
Trigger: TGCTGCCTCCAGCTGCCCGCAGCCTGGAGCCGATTG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGCTCGCCTTCCCCGGCTaGAGACCCACCGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLLAFPG*RPTADH
Trigger: GTGGTCGGCGGTGGGTCTGCAGCCGGGGAAGGCGAG...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCACACCCATCCCGCTCTaGGAATTTCTGATCGCGGTC +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTATPIPL*EFLIAV
Trigger: GACCGCGATCAGAAATTCGCAGAGCGGGATGGGTGT...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATACTCTCGGGTGCAGCTaGTTTGGAAGGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHTLGCS*FGRRPA
Trigger: GGCTGGTCTCCTTCCAAAGCAGCTGCACCCGAGAGT...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCCGAGCTGCAAGATGTaGATGAGTGACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIPSCKM*MSDCRS
Trigger: GCTCCTGCAGTCACTCATCCACATCTTGCAGCTCGG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGGGTGGATGGGGCAGTaGGCCTCACTTGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDGWMGQ*ASLERQ
Trigger: CTGTCTTTCAAGTGAGGCCCACTGCCCCATCCACCC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATAGTAGTACCCTCTGGTaGGTGCACCCAAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHSSTLW*VHPRPC
Trigger: GCACGGTCTTGGGTGCACCCACCAGAGGGTACTACT...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACCAAACCAGCGGAAGCTaGACACTTGCACCGACAGAG +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDQTSGS*TLAPTE
Trigger: CTCTGTCGGTGCAAGTGTTCAGCTTCCGCTGGTTTG...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGAGTGGTCCGAGTTCTaGAGCGGGGTGAACGCCACG +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPEWSEF*SGVNAT
Trigger: CGTGGCGTTCACCCCGCTGCAGAACTCGGACCACTC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCTCGGTGCTGAAATCGTaGACAAACCAGCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGISVLKS*TNQRKL
Trigger: CAGCTTCCGCTGGTTTGTGCACGATTTCAGCACCGA...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACAGGACGCAGACCTGTaGTTGCCACTGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPQDADL*LPLARV
Trigger: TACCCGGGCCAGTGGCAAGCACAGGTCTGCGTCCTG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACCGCTGGAATGGCAAATaGGTCTGCAATCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDRWNGK*VCNLGS
Trigger: GCTCCCCAGATTGCAGACGCATTTGCCATTCCAGCG...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATTGTCCCAATGGGCGCTaGACATGCCTGGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHCPNGR*TCLGIR
Trigger: TCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACA...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCTTCCATGTGGCTCTCTaGTGTGAGAGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAFHVAL*CESRLL
Trigger: AAGCAGCCTGCTCTCACAGCAGAGAGCCACATGGAA...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTGCACCGAGCCCGAGTaGTCCGAGTTCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHCTEPE*SEFCSG
Trigger: CCCGCTGCAGAACTCGGACCACTCGGGCTCGGTGCA...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCACCCCGACGGCAAGCCTaGAGCCAATCCCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSPRRQA*SQSLHR
Trigger: TCGGTGCAGGGATTGGCTCCAGGCTTGCCGTCGGGG...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCACCACACACAGCGCTaGAATGGCAAATGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHHHTQR*NGKCVC
Trigger: GCAGACGCATTTGCCATTCCAGCGCTGTGTGTGGTG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCCCTACGCACACTCGTaGGGTCTCTCGGACCTTATT +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHPYAHS*GLSDLI
Trigger: AATAAGGTCCGAGAGACCCCACGAGTGTGCGTAGGG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGAGGCAGTCCCACAGTaGGTAGCGCCGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEEAVPQ*VAPLLP
Trigger: AGGGAGCAGCGGCGCTACTCACTGTGGGACTGCCTC...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTCTGCTGAGGCAGGCTaGTGGAATTTGTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDSAEAG*WNLWTS
Trigger: ACTGGTCCACAAATTCCATCAGCCTGCCTCAGCAGA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCTCCTTACATTCTCCTaGCTGCCAATCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTALLTFS*LPISPP
Trigger: TGGAGGTGAGATTGGCAGTCAGGAGAATGTAAGGAG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCAAGAACTGCCAAGATaGTCATTCAGGTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIQELPR*SFRSRH
Trigger: GTGCCTGGACCTGAATGATCATCTTGGCAGTTCTTG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACACGATAATGCAGAGCTaGAGGACCAGCTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDTIMQS*RTSCGA
Trigger: TGCTCCACAGCTGGTCCTGCAGCTCTGCATTATCGT...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCAGAGCCACTCATTCTaGGTCTGGAAACAGATCCGG +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHQSHSF*VWKQIR
Trigger: CCGGATCTGTTTCCAGACGCAGAATGAGTGGCTCTG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATTCCAGAGTCAGCATCTaGCTATGGTCACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHSRVSI*LWSHRA
Trigger: GGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGA...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACTGCACTCCAGCCCCTaGGACAGAGCGAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPLHSSP*DRARLC
Trigger: ACAGAGTCTCGCTCTGTCGCAGGGGCTGGAGTGCAG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGGGCACTGGGGGTCACTaGCTGCTGACAGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLGTGGH*LLTVAS
Trigger: GGAGGCCACTGTCAGCAGGCAGTGACCCCCAGTGCC...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGCTTGTGGCCACGTCTaGGGGCAAAGTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPACGHV*GQSEGS
Trigger: GCTGCCTTCACTTTGCCCCCAGACGTGGCCACAAGC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCGATGAAGTGTCATTATaGCCACAGCCCTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIDEVSL*PQPCCH
Trigger: GTGACAGCAGGGCTGTGGCCATAATGACACTTCATC...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCGTCAGTCCTGTGGTTaGATGGTGTTTGGCACTAGA +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTARQSCG*MVFGTR
Trigger: TCTAGTGCCAAACACCATCCAACCACAGGACTGACG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGGGCCTGTAAGCTATaGGTCTGTACGATAATGCAG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIRACKL*VCTIMQ
Trigger: CTGCATTATCGTACAGACTCATAGCTTACAGGCCCT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCAGTTAAAAAGCTGCTaGACACCACACACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHQLKSC*TPHTAL
Trigger: CAGCGCTGTGTGTGGTGTTCAGCAGCTTTTTAACTG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATACACAGTGGAGAACTTaGTTGCTCGTTCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHTQWRT*LLVLSP
Trigger: AGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGT...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACAACCATCCATCGTGGTaGGCTACTCTCAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDNHPSW*ATLNVG
Trigger: TCCCACATTGAGAGTAGCTCACCACGATGGATGGTT...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCCGGAAGCTGAACACTTaGACCGACAGAGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLRKLNT*TDREPS
Trigger: GCTCGGCTCTCTGTCGGTGCAAGTGTTCAGCTTCCG...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCAGATTTGCCCGAGCTaGAAGATGTGGATGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHQICPS*KMWMSD
Trigger: GTCACTCATCCACATCTTGCAGCTCGGGCAAATCTG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAATGGCAAATGCGTCTaGAATCTGGGGAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGINGKCV*NLGSLV
Trigger: TACAAGGCTCCCCAGATTGCAGACGCATTTGCCATT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACACGCAGCACAGTGCTaGTCTTCTGGGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPHAAQC*SSGHWR
Trigger: CCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCATCCCAAAGTACAGCTaGAAAACCGAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIIPKYS*KTEAKR
Trigger: CCTCTTTGCCTCGGTTTTCCAGCTGTACTTTGGGAT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGTCCTGTGGTTGGATaGTGTTTGGCACTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGISPVVG*CLALER
Trigger: CCTTTCTAGTGCCAAACACCATCCAACCACAGGACT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCTTTCCTGGGAAACATTaGCCAGTCTTGACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIFPGKH*PVLTSP
Trigger: AGGGCTTGTCAAGACTGGCCAATGTTTCCCAGGAAA...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCGCTGAGGCAGAAGGATaGTGTGAACCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLAEAEG*CEPGRQ
Trigger: CTGCCTCCCAGGTTCACACCATCCTTCTGCCTCAGC...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCCATAGGGACCAGTaGTCAAGGAGAACTATCACA +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHAHRDQ*SRRTIT
Trigger: TGTGATAGTTCTCCTTGACCACTGGTCCCTATGGGC...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAACCCTGGCGGCGATGGTaGAGAAGTGCCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEPWRRW*RSASRT
Trigger: AGTTCTGCTGGCACTTCTTCACCATCGCCGCCAGGG...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCCGTCTGGGGGCAAAGTaGAGGCAGCGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCRLGAK*RQRLGP
Trigger: AGGACCCAGCCGCTGCCTTCACTTTGCCCCCAGACG...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCCATGACCGAGGACACTaGGAACAGAAAGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLHDRGH*EQKAGN
Trigger: GTTCCCCGCTTTCTGTTCTCAGTGTCCTCGGTCATG...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGCAGTACTCCGTTCTCTaGGCTATGCAAGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLQYSVL*AMQAPG
Trigger: CCCGGGGGCTTGCATAGCTCAGAGAACGGAGTACTG...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCTTTACAAGAACATATaGAGGCCCGACTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGILYKNI*RPDSLA
Trigger: TGCAAGAGAGTCGGGCCTTCATATGTTCTTGTAAAG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCGGAGCGCCGCCTGGCTaGCTGCGCGGAGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRGAPPG*LRGAKL
Trigger: CAGCTTGGCTCCGCGCAGGCAGCCAGGCGGCGCTCC...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACCCTCCTCCTGCTCCTaGGTCGGCTCGCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRPSSCS*VGSPAV
Trigger: GACGGCAGGCGAGCCGACGCAGGAGCAGGAGGAGGG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCTCGCCTTCCCCGGCTaGAGACCCACCGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQLAFPG*RPTADH
Trigger: GTGGTCGGCGGTGGGTCTGCAGCCGGGGAAGGCGAG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAGGACACGAGGGAAGCTaGCGCTGTGAAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSGHEGS*RCETLE
Trigger: CTCCAAGGTTTCACAGCGGCAGCTTCCCTCGTGTCC...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCGTGCACCCAAGACCGTaGAGGAGGAGTTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLVHPRP*RRSLVA
Trigger: TGCTACCAAACTCCTCCTGCACGGTCTTGGGTGCAC...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGATGGCTCGCGCCGCACTaGCGTTATGTCCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRWLAPH*RYVPMG
Trigger: GCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCA...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCATGGCTCGCGCCGCACTaGCGTTATGTCCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAWLAPH*RYVPMG
Trigger: GCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCA...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAACTTGCCTTTGCGGCGTaGAAGGACGAGCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALELAFAA*KDEPRL
Trigger: AAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAG...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCACTTTCCAGAAAGGTaGCTAGCAAATGCAGCATAC +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIHFPER*LANAAY
Trigger: GTATGCTGCATTTGCTAGCCACCTTTCTGGAAAGTG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCCACCACACACAGCGCTaGAATGGCAAATGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLHHTQR*NGKCVC
Trigger: GCAGACGCATTTGCCATTCCAGCGCTGTGTGTGGTG...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCTGCGGTTGTTGGAGATaGACCGTAGGGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLCGCWR*TVGCLW
Trigger: CCACAAGCACCCTACGGTCCATCTCCAACAACCGCA...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTTTGTACTGCAGCCTTaGAGGAGATGGGGAACATTC +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDFVLQP*RRWGTF
Trigger: GAATGTTCCCCATCTCCTCCAAGGCTGCAGTACAAA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAAGTAGTACCCTCTGGTaGGTGCACCCAAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSSSTLW*VHPRPC
Trigger: GCACGGTCTTGGGTGCACCCACCAGAGGGTACTACT...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTCCCTGGCCAGGTTCCTaGGGGCACCAACTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSPWPGS*GHQLAK
Trigger: CTTTGCAAGTTGGTGCCCCCAGGAACCTGGCCAGGG...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAAGTTCTGCAGCGGGGTaGACGCCACGTCGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLASSAAG*TPRRCF
Trigger: AAAGCAGCGACGTGGCGTTCACCCCGCTGCAGAACT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTGAGGCAGTCCCACAGTaGGTAGCGCCGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVEAVPQ*VAPLLP
Trigger: AGGGAGCAGCGGCGCTACTCACTGTGGGACTGCCTC...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCACAAACCAGCGGAAGCTaGACACTTGCACCGACAGAG +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSQTSGS*TLAPTE
Trigger: CTCTGTCGGTGCAAGTGTTCAGCTTCCGCTGGTTTG...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCGTCTGGGGGCAAAGTaGAGGCAGCGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVRLGAK*RQRLGP
Trigger: AGGACCCAGCCGCTGCCTTCACTTTGCCCCCAGACG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCATCTGCTGAGGCAGGCTaGTGGAATTTGTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPSAEAG*WNLWTS
Trigger: ACTGGTCCACAAATTCCATCAGCCTGCCTCAGCAGA...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCATGTTTTCAATCTGCTaGGGCAGGCTGATGGAATTT +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIMFSIC*GRLMEF
Trigger: AAATTCCATCAGCCTGCCTCAGCAGATTGAAAACAT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGGCAAATACTATGGATaGGCCACTGACAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDGKYYG*ATDRFS
Trigger: AGAAAACCTGTCAGTGGCTCATCCATAGTATTTGCC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCACGCAAATGTCAGGATaGACATCTCAGACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGITQMSG*TSQTFL
Trigger: AAGGAAAGTCTGAGATGTTCATCCTGACATTTGCGT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATTTAAGTACAACCTCCTaGGGTTGGGTGGTGTATATC +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHLSTTS*GWVVYI
Trigger: GATATACACCACCCAACCTCAGGAGGTTGTACTTAA...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACGAGCCAGACGTCTGTaGCCACGTCCGCGAAGTACA +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLARARRL*PRPRST
Trigger: TGTACTTCGCGGACGTGGGCACAGACGTCTGGCTCG...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATAAATATCTCCAGATTTaGCCGAGCTGCAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHKYLQI*PSCKMW
Trigger: CCACATCTTGCAGCTCGGGCAAATCTGGAGATATTT...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAAGATGGACCGTAGGGTaGTTGTGGCCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRRWTVG*LWPRLG
Trigger: CCCCAGACGTGGCCACAAGCACCCTACGGTCCATCT...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCATTATGGCCACAGCCCTaGTGTCACCCCTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSLWPQP*CHPFIW
Trigger: CCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAA...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCGACAACATTTGGGTTTaGTGTCCGTTGGATAGGATT +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIDNIWV*CPLDRI
Trigger: AATCCTATCCAACGGACAGCAAACCCAAATGTTGTC...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTGTCCCAATGGGCGCTaGACATGCCTGGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHCPNGR*TCLGIR
Trigger: TCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACA...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCGGGGAACGTTTACTTaGTGTACGGAGGTATTTAAA +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTARGTFT*CTEVFK
Trigger: TTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATACGATCTTGGCTCACTaGAAGCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHTILAH*KLCLLG
Trigger: ACCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATCGT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCTCTGGCTCATTGGTTaGTGTCTTTGTTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGILWLIG*CLCSEN
Trigger: ATTCTCAGAACAAAGACAGCAACCAATGAGCCAGAG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCAATAGTAGTACCCTCTaGTGGGTGCACCCAAGACCG +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLNSSTL*WVHPRP
Trigger: CGGTCTTGGGTGCACCCACCAGAGGGTACTACTATT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGGGTTTGCTGTCCGTTaGATAGGATTTTCACACATG +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHGFAVR*IGFSHM
Trigger: CATGTGTGAAAATCCTATCCAACGGACAGCAAACCC...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCTCCACGTCAGTCCTGTaGTTGGATGGTGTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLSTSVL*LDGVWH
Trigger: GTGCCAAACACCATCCAACCACAGGACTGACGTGGA...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACACTTTGACCTTGGATTaGGGGGAGGAAAAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDTLTLD*GEEKSV
Trigger: TACAGACTTTTCCTCCCCCCAATCCAAGGTCAAAGT...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTGCTGCATTTCTGGTTaGGGGAGTATTGATACTAGG +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDCCISG*GSIDTR
Trigger: CCTAGTATCAATACTCCCCCAACCAGAAATGCAGCA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp CTCTGGTGGGTGCACCCAAGACCGTGCAGGAGGAGTTaGGTAGCAATGGAGAGTCCTATTAAGCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: LWWVHPRPCRRS*VAMESPIKPAS
Trigger: TGACGCTGGCTTAATAGGACTCTCCATTGCTACCAAACTCCTCCTGCACGGTCTTGGGTGCACCCACCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 72 bp TGGGAAGAGTCACTGGGCTCCCAGAAGTCGCAGTTGTaGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: WEESLGSQKSQL*KAVLNPQPHCF
Trigger: GAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAACAACTGCGACTTCTGGGAGCCCAGTGACTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TTGTGGGAAGAGTCACTGGGCTCCCAGAAGTCGCAGTaGTTGAAAGCTGTGCTCAACCCTCAGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: LWEESLGSQKSQ*LKAVLNPQPHC
Trigger: ACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAACAACTGCGACTTCTGGGAGCCCAGTGACTCTTCCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGTTTCAGCCTCCCGTCTaGTTTAGCGGCCATGATGCC +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLFQPPV*FSGHDA
Trigger: GGCATCATGGCCGCTAAATCAGACGGGAGGCTGAAA...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGACAAGCACAACTTGGTaGCTGCCCGAATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLTSTTW*LPESGS
Trigger: GGACCCAGATTCGGGCAGTCACCAAGTTGTGCTTGT...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCACACAGTGGAGAACTTaGTTGCTCGTTCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLTQWRT*LLVLSP
Trigger: AGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCTCCTTTTTCACTAACTaGTTAATGTTCCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGISFFTN*LMFPCR
Trigger: CCTGCAAGGGAACATTAATCAGTTAGTGAAAAAGGA...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCATACCTGATGCTAAATaGCGAGTTAATAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIIPDAK*RVNRYS
Trigger: GCTGTACCTATTAACTCGTCATTTAGCATCAGGTAT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAACTGCAGGAGCCAGATaGAGAAGGAGCAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLATAGAR*RRSRTQ
Trigger: CTGCGTCCTGCTCCTTCTGCATCTGGCTCCTGCAGT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGCATCATCTTTGTACTaGAGCCTTGGAGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPASSLY*SLGGDG
Trigger: CCCATCTCCTCCAAGGCTGCAGTACAAAGATGATGC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGTGCACCCAAGACCGTaGAGGAGGAGTTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEVHPRP*RRSLVA
Trigger: TGCTACCAAACTCCTCCTGCACGGTCTTGGGTGCAC...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGACCTTTGGGCAAATTaGTTGACATCTCTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDDLWAN*LTSLSH
Trigger: ATGGCTTAGAGATGTCAAGCAATTTGCCCAAAGGTC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGTGTCACGCAGCACAGTaGTGCTCTTCTGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLCHAAQ*CSSGHW
Trigger: CCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCTCACTCAGGAGAGAATaGAATCGGGTCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLSLRRE*NRVQSQ
Trigger: CTGGCTTTGGACCCGATTGCATTCTCTCCTGAGTGA...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAAGACCCTCCCATCCCTaGATCCAGAAAGGAATCCAT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPRPSHP*IQKGIH
Trigger: ATGGATTCCTTTCTGGATGCAGGGATGGGAGGGTCT...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGGCAGGAGCGCCGCCTaGCTGCCTGCGCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVGRSAA*LPARSQ
Trigger: TTGGCTCCGCGCAGGCAGCCAGGCGGCGCTCCTGCC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCCCCGACGGCAAGCCTaGAGCCAATCCCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQPRRQA*SQSLHR
Trigger: TCGGTGCAGGGATTGGCTCCAGGCTTGCCGTCGGGG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCTTGCCTTTGCGGCGTaGAAGGACGAGCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICLAFAA*KDEPRL
Trigger: AAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTACCGTAGGGTGCTTGTaGCCACGTCTGGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFTVGCL*PRLGAK
Trigger: CTTTGCCCCCAGACGTGGCCACAAGCACCCTACGGT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGATGAAGTGTCATTATaGCCACAGCCCTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPDEVSL*PQPCCH
Trigger: GTGACAGCAGGGCTGTGGCCATAATGACACTTCATC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCTGGTGGCTAGAGAACTaGACTACTTTGTGTGAATTA +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAWWLEN*TTLCEL
Trigger: TAATTCACACAAAGTAGTCCAGTTCTCTAGCCACCA...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTTGTGGGAAGAGTCACTaGGCTCCCAGAAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSCGKSH*APRSRS
Trigger: ACTGCGACTTCTGGGAGCCCAGTGACTCTTCCCACA...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAAGAAAGTTTCTTGCCTaGCAGGGGCCAAGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPRKFLA*QGPSEG
Trigger: TCCTTCACTTGGCCCCTGCCAGGCAAGAAACTTTCT...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTTTGTGGTAACCAGTTaGTGCTTGGAAATTGGCATG +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDFVVTS*CLEIGM
Trigger: CATGCCAATTTCCAAGCACCAACTGGTTACCACAAA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACCCTCCTGAGGTTGGGTaGTGTATATCATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDPPEVG*CISCTN
Trigger: ATTTGTACATGATATACACCACCCAACCTCAGGAGG...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTTCTGATCGCGGTCGCTaGCAACACTGCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFSDRGR*QHCGCW
Trigger: CCAACAACCGCAGTGTTGTCAGCGACCGCGATCAGA...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACGCTCTGCGAATTTCTaGTCGCGGTCGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRRSANF*SRSLTT
Trigger: TGTTGTCAGCGACCGCGATCAGAAATTCGCAGAGCG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAGCAGTGGGCCTCACTTaGAAGACAGGTACACACCCA +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRAVGLT*KTGTHP
Trigger: TGGGTGTGTACCTGTCTTTCAAGTGAGGCCCACTGC...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAGCTCCTTGGTCTTGTTaGAAGCCGTACATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAAPWSC*KPYMGC
Trigger: GCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGC...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCATTAATAGATACCCTCTaGCCCAACACCCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPLIDTL*PNTQSC
Trigger: GCAGGATTGGGTGTTGGGTCAGAGGGTATCTATTAA...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAATGGTCACCCCACCTGTaGATCTGCCACTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEWSPHL*ICHFLL
Trigger: AAGAAGGAAGTGGCAGATTCACAGGTGGGGTGACCA...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCATGGTCTGGAAAGCCTTaGAAAGAGGCTGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSWSGKP*KEAEVS
Trigger: GGAGACTTCAGCCTCTTTTCAAGGCTTTCCAGACCA...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGAGGCGCTCCTCGGACCTaGACATTCCTCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRGAPRT*TFLSSP
Trigger: AGGGGAGGAGAGGAATGTGCAGGTCCGAGGAGCGCC...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAATTAGATGCTTGCCTTTaGGGCGTGGAAGGACGAGCC +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFRELDACL*GVEGRA
Trigger: GGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAA...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGACTTGCTGGCGTTAGATaGTTGCCTTTGCGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRLAGVR*LPLRRG
Trigger: TCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAG...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATATGTGGATGAGTGACTaGAGGAGCCAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHMWMSD*RSQMQK
Trigger: CTTCTGCATCTGGCTCCTGCAGTCACTCATCCACAT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGACGATAATGCAGAGCTaGAGGACCAGCTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLTIMQS*RTSCGA
Trigger: TGCTCCACAGCTGGTCCTGCAGCTCTGCATTATCGT...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAGCATCATCTTTGTACTaGAGCCTTGGAGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSASSLY*SLGGDG
Trigger: CCCATCTCCTCCAAGGCTGCAGTACAAAGATGATGC...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTGGGAATCAGAGCTTTaGATCAAGAAAAGTCACCTA +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDWESEL*IKKSHL
Trigger: TAGGTGACTTTTCTTGATGCAAAGCTCTGATTCCCA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGGATGCCACTCGAATaGTCAGGGCATTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFGMPLE*SGHFTA
Trigger: GGCCGTGAAATGCCCTGAGCATTCGAGTGGCATCCC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAATGCTGCCACCCAGGTaGCTATGTGAGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRMLPPR*LCEEKG
Trigger: TCCCTTCTCCTCACATAGGCACCTGGGTGGCAGCAT...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAGTGACAGCTCACTGCTaGCTTCCCTCCTCTTACAGC +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAVTAHC*LPSSYS
Trigger: GCTGTAAGAGGAGGGAAGGCAGCAGTGAGCTGTCAC...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAATTCTCTTCAGGCCTGTaGACGTCATGGTACTACGGC +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEFSSGL*TSWYYG
Trigger: GCCGTAGTACCATGACGTGCACAGGCCTGAAGAGAA...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGCTGGTACACACATCTaGGATAGGACTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPAGTHI*DRTHSD
Trigger: ATCACTGTGAGTCCTATCGCAGATGTGTGTACCAGC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACCATTCTCTTCCATTTaGTGTTCACCTGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPPFSSI*CSPATC
Trigger: ACAGGTGGCAGGTGAACAGCAAATGGAAGAGAATGG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCACACACAGCGCTGGAATaGCAAATGCGTCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSHTALE*QMRLQS
Trigger: AGATTGCAGACGCATTTGCCATTCCAGCGCTGTGTG...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAGTGACTGCCCGAATCTaGGTCCATTGGGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSVTARI*VHWDER
Trigger: TCTTTCATCCCAATGGACCCAGATTCGGGCAGTCAC...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGATGCGGTTGTTGGAGATaGACCGTAGGGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRCGCWR*TVGCLW
Trigger: CCACAAGCACCCTACGGTCCATCTCCAACAACCGCA...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACAACACTGCGGTTGTTaGAGATGGACCGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRQHCGC*RWTVGC
Trigger: GCACCCTACGGTCCATCTCCAACAACCGCAGTGTTG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCACACTCATTCTGCGTCTaGAAACAGATCCGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSHSFCV*KQIRFQ
Trigger: CTGGAACCGGATCTGTTTCCAGACGCAGAATGAGTG...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCATCATTCTCAGTTGTTTaGGGCTTCCACGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPSFSVV*GFHVSP
Trigger: AGGACTGACGTGGAAGCCCCAAACAACTGAGAATGA...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGCTGTGGATGTCATCGTaGGGACACAGTCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLLWMSS*GHSLWM
Trigger: CATCCAGAGACTGTGTCCCCACGATGACATCCACAG...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TCTCAGAAATGGGGGATAGAGCGGAATCGCCCATCCTaGGCCATTTTGAAACACTGGAGCATCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SQKWGIERNRPS*AILKHWSIRWE
Trigger: CTCCCACCTGATGCTCCAGTGTTTCAAAATGGCCAAGGATGGGCGATTCCGCTCTATCCCCCATTTCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCTTTCAGCCTCCCGTCTaGTTTAGCGGCCATGATGCC +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCFQPPV*FSGHDA
Trigger: GGCATCATGGCCGCTAAATCAGACGGGAGGCTGAAA...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATACCAGTGAAGGACGATaGAGATCCCAAAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHTSEGR*RSQSTA
Trigger: AGCTGTACTTTGGGATCTTCATCGTCCTTCACTGGT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCGCTCTGCGAATTTCTaGTCGCGGTCGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICRSANF*SRSLTT
Trigger: TGTTGTCAGCGACCGCGATCAGAAATTCGCAGAGCG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGCAGTGGGCCTCACTTaGAAGACAGGTACACACCCA +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFAVGLT*KTGTHP
Trigger: TGGGTGTGTACCTGTCTTTCAAGTGAGGCCCACTGC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTACTCCAACCGCTCCTaGATAAGGGCATCATCTTTG +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHYSNRS*IRASSL
Trigger: CAAAGATGATGCCCTTATTCAGGAGCGGTTGGAGTA...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAATGCCCTGCTCTAGGATaGAGTGTCATTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALECPALG*SVIMAT
Trigger: TGTGGCCATAATGACACTTCATCCTAGAGCAGGGCA...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGAAATGTGTAGAAAATaGACCACTCCATCAATGCTA +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDEMCRK*TTPSML
Trigger: TAGCATTGATGGAGTGGTTCATTTTCTACACATTTC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTGACTCCTGACTCCTaGAATTGTCACGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLALTPDS*NCHAAQ
Trigger: CTGTGCTGCGTGACAATTTCAGGAGTCAGGAGTCAG...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACTGACTCCTGACTCCTaGCTCCTGAAATTGTCACGC +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRLTPDS*LLKLSR
Trigger: GCGTGACAATTTCAGGAGTCAGGAGTCAGGAGTCAG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCATTCTGGCTAACACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPFWLTR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGAA...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTGGAAGAATCAGAGCTTaGGGGCTATCAATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSGRIRA*GLSMVQ
Trigger: CTGGACCATTGATAGCCCTCAAGCTCTGATTCTTCC...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCCAGGACAGCCTACCTaGCCTCTTTCATTCATGTGT +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLPGQPT*PLSFMC
Trigger: ACACATGAATGAAAGAGGTCAGGTAGGCTGTCCTGG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATGGCAAGCACAAAATTTaGGACAATGCTCACCAACCC +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHGKHKI*DNAHQP
Trigger: GGGTTGGTGAGCATTGTCTCAAATTTTGTGCTTGCC...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCATCGGTGCTGAAATCGTaGACAAACCAGCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLASVLKS*TNQRKL
Trigger: CAGCTTCCGCTGGTTTGTGCACGATTTCAGCACCGA...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTCTGGCGTTAGATGCTTaGCTTTGCGGCGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFLALDA*LCGVEG
Trigger: TCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAG...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGCAGATTTGCCCGAGCTaGAAGATGTGGATGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLQICPS*KMWMSD
Trigger: GTCACTCATCCACATCTTGCAGCTCGGGCAAATCTG...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTCGCTGGAATGGCAAATaGGTCTGCAATCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFRWNGK*VCNLGS
Trigger: GCTCCCCAGATTGCAGACGCATTTGCCATTCCAGCG...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAACACGGCTCACTGCCCTaGTCTAGGATGAAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREHGSLP*SRMKCH
Trigger: ATGACACTTCATCCTAGAGCAGGGCAGTGAGCCGTG...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACACGGCTCACTGCCCTaGTCTAGGATGAAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAHGSLP*SRMKCH
Trigger: ATGACACTTCATCCTAGAGCAGGGCAGTGAGCCGTG...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATAGAAGAGGTTCTCTTTaGTCAATTCAATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHRRGSL*SIQSVQ
Trigger: CTGAACAGATTGAATTGAGCAAAGAGAACCTCTTCT...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAACTCCACTTCCTCCGTaGTGCACACAGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRTPLPP*CTQLSS
Trigger: AGAAGAGAGCTGTGTGCAGCACGGAGGAAGTGGAGT...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCCTAAGTATATTGTGTaGAAATATCTCCAGATTTGC +
Preference number: 4 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAPKYIV*KYLQIC
Trigger: GCAAATCTGGAGATATTTCCACACAATATACTTAGG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACACTTTCCAGAAAGGTaGCTAGCAAATGCAGCATAC +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPHFPER*LANAAY
Trigger: GTATGCTGCATTTGCTAGCCACCTTTCTGGAAAGTG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTACCGTAGGGTGCTTGTaGCCACGTCTGGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFTVGCL*PRLGAK
Trigger: CTTTGCCCCCAGACGTGGCCACAAGCACCCTACGGT...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAAATAGTAGTACCCTCTaGTGGGTGCACCCAAGACCG +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFRENSSTL*WVHPRP
Trigger: CGGTCTTGGGTGCACCCACCAGAGGGTACTACTATT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTCACTCATTCTGCGTCTaGAAACAGATCCGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSHSFCV*KQIRFQ
Trigger: CTGGAACCGGATCTGTTTCCAGACGCAGAATGAGTG...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAAGTCCTGTGGTTGGATaGTGTTTGGCACTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSSPVVG*CLALER
Trigger: CCTTTCTAGTGCCAAACACCATCCAACCACAGGACT...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAGGCACTTCTTCCATGTaGCTCTCTGCTGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRGTSSM*LSAVRA
Trigger: TGCTCTCACAGCAGAGAGCCACATGGAAGAAGTGCC...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCATGACCGAGGACACTaGGAACAGAAAGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVHDRGH*EQKAGN
Trigger: GTTCCCCGCTTTCTGTTCTCAGTGTCCTCGGTCATG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAATGTTTTCAATCTGCTaGGGCAGGCTGATGGAATTT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPMFSIC*GRLMEF
Trigger: AAATTCCATCAGCCTGCCTCAGCAGATTGAAAACAT...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGGCCAGTTCTCAGGAATaGCAGCACTTTCTAACCTAC +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLASSQE*QHFLTY
Trigger: GTAGGTTAGAAAGTGCTGTCATTCCTGAGAACTGGC...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGGGGTCACTGCCTGCTaGCAGTGGCCTCCCGCGAAT +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVGVTAC*QWPPAN
Trigger: ATTCGCGGGAGGCCACTGTCAGCAGGCAGTGACCCC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCGGAAGCTGAACACTTaGACCGACAGAGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQRKLNT*TDREPS
Trigger: GCTCGGCTCTCTGTCGGTGCAAGTGTTCAGCTTCCG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGGGACACGAGGGAAGCTaGCGCTGTGAAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQGHEGS*RCETLE
Trigger: CTCCAAGGTTTCACAGCGGCAGCTTCCCTCGTGTCC...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCGCACAACTTGGTGACTaGCCGAATCTGGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCAQLGD*PNLGPL
Trigger: CAATGGACCCAGATTCGGGCAGTCACCAAGTTGTGC...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAAACATGTCTCTCCCATaGTGGGTACCTATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSNMSLP*WVPIPE
Trigger: TTCAGGAATAGGTACCCAGCATGGGAGAGACATGTT...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCGGATGTTGTGGGTCCTaGAACTCCTTTTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLGCCGS*NSFCFI
Trigger: TATAAAGCAAAAGGAGTTGCAGGACCCACAACATCC...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCAAGCCGTACATGGGCTaGATAGGATTTCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLKPYMG*IGFLSK
Trigger: TTTTGACAGAAATCCTATGCAGCCCATGTACGGCTT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCAGAGCCACTCATTCTaGGTCTGGAAACAGATCCGG +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICQSHSF*VWKQIR
Trigger: CCGGATCTGTTTCCAGACGCAGAATGAGTGGCTCTG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTTCCAGAGTCAGCATCTaGCTATGGTCACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFSRVSI*LWSHRA
Trigger: GGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGA...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGTCTCCAGTTACTGTCTaGGGAGGGTTTAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLSPVTV*GGFNGR
Trigger: TCTGCCATTAAACCCTCCGCAGACAGTAACTGGAGA...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGCAACTTTCCTTTTGTaGTTGACTGTGCATTGCCTA +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPATFLL*LTVHCL
Trigger: TAGGCAATGCACAGTCAAGCACAAAAGGAAAGTTGC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCAGGTCCAGGCACTGTaGTCATACTGGGGGAAATGT +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICQVQAL*SYWGKC
Trigger: ACATTTCCCCCAGTATGAGCACAGTGCCTGGACCTG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAGTGACTGCCCGAATCTaGGTCCATTGGGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRVTARI*VHWDER
Trigger: TCTTTCATCCCAATGGACCCAGATTCGGGCAGTCAC...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAGGCGCTGCACATGCCTaGGAATCAGACTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREGAAHA*ESDSHF
Trigger: AAAATGAGAGTCTGATTCCCAGGCATGTGCAGCGCC...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAGGCGCTGCACATGCCTaGGAATCAGACTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAGAAHA*ESDSHF
Trigger: AAAATGAGAGTCTGATTCCCAGGCATGTGCAGCGCC...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACGTCAGTCCTGTGGTTaGATGGTGTTTGGCACTAGA +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRRQSCG*MVFGTR
Trigger: TCTAGTGCCAAACACCATCCAACCACAGGACTGACG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCTCCACGTCAGTCCTGTaGTTGGATGGTGTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCSTSVL*LDGVWH
Trigger: GTGCCAAACACCATCCAACCACAGGACTGACGTGGA...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAACACAACAACTTCAGTaGTCTGATGCTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFRETQQLQ*SDAATQ
Trigger: CTGGGTGGCAGCATCAGACCACTGAAGTTGTTGTGT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACATTACCTGTTCTTTTTaGATCTCAGTTGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: APHCRYVPMGAAHAWESDITCSF*ISVVSS
Trigger: AGATGAGACAACTGAGATCCAAAAAGAACAGGTAAT...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAACAGTGCTGCTCTTCTaGGCATTGGAGGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRTVLLF*ALEERL
Trigger: AAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGT...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAAACTATCACAGGGGGTaGGTTCCCCTAATGACAGAG +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLANYHRG*VPLMTE
Trigger: CTCTGTCATTAGGGGAACCCACCCCCTGTGATAGTT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCATTTCAAGGAGGGCTCTaGAGAGTTCCATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAFQGGL*RVPCGL
Trigger: CAGACCACATGGAACTCTCCAGAGCCCTCCTTGAAA...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTTTCAAACTAGGGCACTaGGGGTCACTGCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVFKLGH*GSLPAD
Trigger: GTCAGCAGGCAGTGACCCCCAGTGCCCTAGTTTGAA...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCCGCTGTCCTCGGTGCTaGAATCGTGCACAAACCAGC +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRRCPRC*NRAQTS
Trigger: GCTGGTTTGTGCACGATTTCAGCACCGAGGACAGCG...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAACTTGCAAAGTAGGGTaGTCTTGCAAGAGACAAATG +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSTCKVG*SCKRQM
Trigger: CATTTGTCTCTTGCAAGATCACCCTACTTTGCAAGT...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGTTTTCACCATGTGCTaGCAAGAAGAGCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEVFTMC*QEEPFP
Trigger: AGGAAAAGGCTCTTCTTGTCAGCACATGGTGAAAAC...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATAACTTAGAACTTACATaGTTGAAGCATGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHNLELT*LKHDGA
Trigger: GGCCCCATCATGCTTCAATCATGTAAGTTCTAAGTT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCAGGCAACAATATCATTaGATGGGTTACAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLRQQYH*MGYNSV
Trigger: GACAGAGTTGTAACCCATTCAATGATATTGTTGCCT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCGACTGTATTTCTGAGTaGCAGCTCACTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICDCISE*QLTAAF
Trigger: GAAGGCAGCAGTGAGCTGTCACTCAGAAATACAGTC...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCCTCTCTTGCATACTCTaGAACTATGACCTGATAACT +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLLSCIL*NYDLIT
Trigger: AGTTATCAGGTCATAGTTTCAGAGTATGCAAGAGAG...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTTGTCATGCAGATAGTTaGCAACAGGGGACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSCHADS*QQGTEK
Trigger: TTTCTCAGTCCCCTGTTGTCAACTATCTGCATGACA...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACCTGGAGCCAATCCCTaGACCGAGCCCGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRPGANP*TEPEWS
Trigger: GGACCACTCGGGCTCGGTGCAGGGATTGGCTCCAGG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTTTAGATGCTTGCCTTTaGGGCGTGGAAGGACGAGCC +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFLDACL*GVEGRA
Trigger: GGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAA...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACTGGCGTTAGATGCTTaGCTTTGCGGCGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRLALDA*LCGVEG
Trigger: TCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAAAGGTGGCTAGCAAATaGAGCATACTCACATCCGCA +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRKVASK*SILTSA
Trigger: TGCGGATGTGAGTATGCTGCATTTGCTAGCCACCTT...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGACACCCATCCCGCTCTaGGAATTTCTGATCGCGGTC +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQTPIPL*EFLIAV
Trigger: GACCGCGATCAGAAATTCGCAGAGCGGGATGGGTGT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAAGTGGAGAACTTGATTaGTCGTTCTCTCGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFRESGELD*SFSRLL
Trigger: AAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAAGTGGAGAACTTGATTaGTCGTTCTCTCGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLASGELD*SFSRLL
Trigger: AAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCATGGTCAATAATAGACTaGACATATGACAGCGATCCC +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSWSIID*TYDSDP
Trigger: GGGATCGCTGTCATATGTGCAGTCTATTATTGACCA...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTATGCTGGTGTTAAGATaGGTTCTACTGGTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSMLVLR*VLLVCD
Trigger: ATCGCACACCAGTAGAACGCATCTTAACACCAGCAT...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAATTTCCGTACTCTGTGTaGCTGCTCACGGTGAATCAT +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREFPYSV*LLTVNH
Trigger: ATGATTCACCGTGAGCAGGCACACAGAGTACGGAAA...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGGCTTGGGATCAGGCATaGAAACCCCTCAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQAWDQA*KPLRHQ
Trigger: CTGATGCCTGAGGGGTTTGCATGCCTGATCCCAAGC...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATGCTATGGTCTCTTTCTaGGCTCTTTACCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHAMVSF*ALYQRK
Trigger: CTTTCTTTGGTAAAGAGCGCAGAAAGAGACCATAGC...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTCACACAGCGCTGGAATaGCAAATGCGTCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFHTALE*QMRLQS
Trigger: AGATTGCAGACGCATTTGCCATTCCAGCGCTGTGTG...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCACGAATCTGGGTCCATTaGGATGAAAGAAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSRIWVH*DERRHN
Trigger: ATTATGCCTTCTTTCATCCCAATGGACCCAGATTCG...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGATTTGTACTGCAGCCTTaGAGGAGATGGGGAACATTC +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRFVLQP*RRWGTF
Trigger: GAATGTTCCCCATCTCCTCCAAGGCTGCAGTACAAA...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCTGTCACCCCTTCATCTaGATGTTGTGGGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICCHPFI*MLWVLQ
Trigger: TTGCAGGACCCACAACATCCAGATGAAGGGGTGACA...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACGGGTGCAGCTGCTTTaGAAGGAGACCAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTRVQLL*KETSRP
Trigger: GGGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCCGTCATTCTTTCAGGTaGAGTCAGAGACTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCRHSFR*SQRLSG
Trigger: ACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACG...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGATCCAGCCCATTCCTCTaGCTCGCGCCGCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRSSPFL*LAPHCR
Trigger: ACGGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGA...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGTCAGCATCTGCCTATaGTCACACAGAGCCACTCAT +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFVSICL*SHRATH
Trigger: ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGAC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCGGAGGGATGGTTAAGTaGTTCATGTTCTACAAACAA +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLGGMVK*FMFYKQ
Trigger: TTGTTTGTAGAACATGAACCACTTAACCATCCCTCC...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TGGGCGCTGCACATGCCTGGGAATCAGACTCTCATTTaGCCTTTTTCCCCACTTCCTCTTTGTGTACCTGTT +
Preference number: 4 (lower is better)
Translates to: WALHMPGNQTLI*PFSPLPLCVPV
Trigger: AACAGGTACACAAAGAGGAAGTGGGGAAAAAGGCAAAATGAGAGTCTGATTCCCAGGCATGTGCAGCGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAGATTCTCTCTTCACCTaGTATTCTGATAGCACCCCT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLADSLFT*YSDSTP
Trigger: AGGGGTGCTATCAGAATATCAGGTGAAGAGAGAATC...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCTACATGATTGAAGCATaGTGGGGCCTGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICYMIEA*WGLLGL
Trigger: CAAACCCAACAGGCCCCATCATGCTTCAATCATGTA...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAACATTGCCTAGCCAAATaGGTTGTAGAGGTCAAACTT +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEHCLAK*VVEVKL
Trigger: AAGTTTGACCTCTACAACTCATTTGGCTAGGCAATG...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCTCATGGTACTACGGCTaGACGGAAGTGCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCSWYYG*TEVLLF
Trigger: AAAAAGGAGCACTTCCGTTCAGCCGTAGTACCATGA...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCAGATTCGTGATCTTTaGGCTCGTAACCAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLQIRDL*ARNQGF
Trigger: AAAACCTTGGTTACGAGCTCAAAGATCACGAATCTG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAGCTTGGAAATTGGCATaGCATCAACAAACCAAACCC +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRAWKLA*HQQTKP
Trigger: GGGTTTGGTTTGTTGATGTCATGCCAATTTCCAAGC...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACAGAAGAGATTATATTaGGTGCGTATCTTATGTCAG +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPQKRLY*VRILCQ
Trigger: CTGACATAAGATACGCACTCAATATAATCTCTTCTG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACTCTCCCTAGGCTATTaGGCTGTCTGGCTACAGAGA +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRLSLGY*AVWLQR
Trigger: TCTCTGTAGCCAGACAGCTCAATAGCCTAGGGAGAG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTCGCCGACCACCGTCTTaGAATCGGCTCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSRRPPS*NRLQAA
Trigger: CGCAGCCTGGAGCCGATTGCAAGACGGTGGTCGGCG...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTAAGGTGGCTAGCAAATaGAGCATACTCACATCCGCA +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFKVASK*SILTSA
Trigger: TGCGGATGTGAGTATGCTGCATTTGCTAGCCACCTT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCTGTGAGGAGAAGGGATaGCACTCGAATGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRCEEKG*HSNAQG
Trigger: GCCCTGAGCATTCGAGTGGCATCCCTTCTCCTCACA...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAGAGAGTCTTGCCACATaGCCATTTTTAGGACAGCAA +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREESLAT*PFLGQQ
Trigger: TTGCTGTCCTAAAAATGGGCATGTGGCAAGACTCTC...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAGCTGTGAGAGCAGGCTaGTTGCATGTTAGACTAATT +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRAVRAG*LHVRLI
Trigger: AATTAGTCTAACATGCAAGCAGCCTGCTCTCACAGC...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAATGGGGGCCAGGTCACTaGCTGCAATATATATATATA +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEWGPGH*LQYIYI
Trigger: TATATATATATATTGCAGGCAGTGACCTGGCCCCCA...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAACAACTCTGTCATCTTaGAGACCTTCAGACATGCTA +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALETTLSS*RPSDML
Trigger: TAGCATGTCTGAAGGTCTGCAAGATGACAGAGTTGT...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAATTAGGGCTCAGTTGTaGAGAGATTCCCAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRIRAQL*RDSQFL
Trigger: AAGGAACTGGGAATCTCTGCACAACTGAGCCCTAAT...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTTGCTTGGTGAGTTGTTaGTGTTGTATTCCTCAGACT +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSCLVSC*CCIPQT
Trigger: AGTCTGAGGAATACAACAGCAACAACTCACCAAGCA...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCGATGTACAACAACTTTaGCTCATGAAGCCATATCAT +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLDVQQL*LMKPYH
Trigger: ATGATATGGCTTCATGAGGCAAAGTTGTTGTACATC...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGCGAATCTGGGTCCATTaGGATGAAAGAAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLRIWVH*DERRHN
Trigger: ATTATGCCTTCTTTCATCCCAATGGACCCAGATTCG...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCAATGGCAAAGATATGTaGAAAATGCAAGGGAGCATA +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLNGKDM*KMQGSI
Trigger: TATGCTCCCTTGCATTTTCCACATATCTTTGCCATT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCAACAATACTTCAGTCTaGTTTGGCAGCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: VARSLPESASAYGHTEPLNNTSV*FGSTNF
Trigger: AAAGTTTGTGCTGCCAAACCAGACTGAAGTATTGTT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp GTTCCTGGGGGCACCAACTTGCAAAGTAGGGTGATCTaGCAAGAGACAAATGTTTTCAATCTGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPGGTNLQSRVI*QETNVFNLLRQ
Trigger: CTGCCTCAGCAGATTGAAAACATTTGTCTCTTGCAAGATCACCCTACTTTGCAAGTTGGTGCCCCCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 72 bp AACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTaGGGCAAATTGCTTGACATCTCTAAGCCATTTACA +
Preference number: 4 (lower is better)
Translates to: NPQPHCFLAVGP*GKLLDISKPFT
Trigger: TGTAAATGGCTTAGAGATGTCAAGCAATTTGCCCAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp GAACCATTGTATTCTCTGCTTGGTGAGTTGTTGCTGTaGTATTCCTCAGACTCCACTTCCTCCGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: EPLYSLLGELLL*YSSDSTSSVLH
Trigger: GTGCAGCACGGAGGAAGTGGAGTCTGAGGAATACAACAGCAACAACTCACCAAGCAGAGAATACAATGGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTCCACGAAGAAGAGCGTaGGCCCGAACCACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSPRRRA*ARTTSA
Trigger: AGCGCTGGTGGTTCGGGCTCACGCTCTTCTTCGTGG...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTATCTGATCGCGGTCGCTaGCAACACTGCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVSDRGR*QHCGCW
Trigger: CCAACAACCGCAGTGTTGTCAGCGACCGCGATCAGA...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGTGCCCTGCTCTAGGATaGAGTGTCATTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQCPALG*SVIMAT
Trigger: TGTGGCCATAATGACACTTCATCCTAGAGCAGGGCA...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGATTCTCTCTTCACCTaGTATTCTGATAGCACCCCT +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFDSLFT*YSDSTP
Trigger: AGGGGTGCTATCAGAATATCAGGTGAAGAGAGAATC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATAAGGTACAGTTCAACTaGGAAACTCAATTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHKVQFN*ETQFPK
Trigger: CTTTGGAAATTGAGTTTCTCAGTTGAACTGTACCTT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAATCCTATGCAAAAAGTaGGTAAGAGCAGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAILCKK*VRADLP
Trigger: AGGGAGATCTGCTCTTACTCACTTTTTGCATAGGAT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAACCAAAAGCAAAACTTaGTTTAGGCAGCTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALETKSKT*FRQLVS
Trigger: AGAAACGAGCTGCCTAAATCAAGTTTTGCTTTTGGT...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATGGTAGTCTCAAGAAATaGAATAAAAGCAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: GTESSRVSICLWSHRATHGSLKK*NKSSNC
Trigger: ACAGTTGCTGCTTTTATTTCATTTCTTGAGACTACC...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAAGTAACTCTTACCCATaGACCTTGCTTAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLASNSYP*TLLKRT
Trigger: AGTCCTCTTAAGCAAGGTTCATGGGTAAGAGTTACT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGAACTTCTCTGCTCTGTaGAAAGGCAAATACTATGGA +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLNFSAL*KGKYYG
Trigger: TCCATAGTATTTGCCTTTTCACAGAGCAGAGAAGTT...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAACTGAGTGTAGAATGTaGCACAATCAAAACCCTACC +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFRETECRM*HNQNPT
Trigger: GGTAGGGTTTTGATTGTGTCACATTCTACACTCAGT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAATCATGCACGCATTCTaGAAAAATGCAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRIMHAF*KNAAWD
Trigger: ATCCCAAGCTGCATTTTTTCAGAATGCGTGCATGAT...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCTTGACAACAGGGGACTaGGAAATTACTGGTCCATTC +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICLTTGD*EITGPF
Trigger: GAATGGACCAGTAATTTCTCAGTCCCCTGTTGTCAA...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACGAGCCAGACGTCTGTaGCCACGTCCGCGAAGTACA +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRRARRL*PRPRST
Trigger: TGTACTTCGCGGACGTGGGCACAGACGTCTGGCTCG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGATGTGGATGAGTGACTaGAGGAGCCAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQMWMSD*RSQMQK
Trigger: CTTCTGCATCTGGCTCCTGCAGTCACTCATCCACAT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCAAATATCTCCAGATTTaGCCGAGCTGCAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCKYLQI*PSCKMW
Trigger: CCACATCTTGCAGCTCGGGCAAATCTGGAGATATTT...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCGCACAACTTGGTGACTaGCCGAATCTGGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRAQLGD*PNLGPL
Trigger: CAATGGACCCAGATTCGGGCAGTCACCAAGTTGTGC...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGAGTACCCTCTGGTGGGTaGACCCAAGACCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRVPSGG*TQDRAG
Trigger: TCCTGCACGGTCTTGGGTGCACCCACCAGAGGGTAC...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAATTGTAAGGCTCACATaGCACACAATGGCATTTTGG +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRIVRLT*HTMAFW
Trigger: CCAAAATGCCATTGTGTGGCATGTGAGCCTTACAAT...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTCACGAGAAGCTCTCCTaGAGAGCCCATAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIHEKLS*RAHRDQ
Trigger: CTGGTCCCTATGGGCTCTGCAGGAGAGCTTCTCGTG...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTAATATGACCAGCAATTaGTTACGGCGCAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSNMTSN*LRRKKV
Trigger: AACTTTCTTGCGCCGTAAGCAATTGCTGGTCATATT...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCAATTCTGTCTCACAGTaGACGATCCAGAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCNSVSQ*TIQKVM
Trigger: CATGACCTTCTGGATCGTCCACTGTGAGACAGAATT...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGTGTCACCCCTTCATCTaGATGTTGTGGGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQCHPFI*MLWVLQ
Trigger: TTGCAGGACCCACAACATCCAGATGAAGGGGTGACA...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCGTCATTCTTTCAGGTaGAGTCAGAGACTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQRHSFR*SQRLSG
Trigger: ACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCGGGTTTGCTGTCCGTTaGATAGGATTTTCACACATG +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCGFAVR*IGFSHM
Trigger: CATGTGTGAAAATCCTATCCAACGGACAGCAAACCC...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTCTCTGTTACTTTAGTTaGAAAGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSLCYFS*KVCVCV
Trigger: CACACACACACACACTTTCCAACTAAAGTAACAGAG...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTCAAGAGTCTCAGAAATaGGGGATAGAGCGGAATCGC +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFQESQK*GIERNR
Trigger: GCGATTCCGCTCTATCCCCCATTTCTGAGACTCTTG...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCTGCTCTTCTGGGCATTaGAGGAAAGGCTTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICCSSGH*RKGFRE
Trigger: TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCA...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGATGCTGCTTATATATGTaGGAAGCCAATCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRCCLYM*EANHSG
Trigger: TCCTGAGTGATTGGCTTCCCACATATATAAGCAGCA...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGTCCCTTGCAGGAGCTTaGTTACAATATTACAAGTCA +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLSLAGA*LQYYKS
Trigger: TGACTTGTAATATTGTAACCAAGCTCCTGCAAGGGA...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCTATATTCCCACGATTaGCCACCTCATTGTACATTA +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLLYSHD*PPHCTL
Trigger: TAATGTACAATGAGGTGGCCAATCGTGGGAATATAG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGTTTATATTGTGCAATaGTTTCATGCTAAGCACGAT +
Preference number: 4 (lower is better)
Translates to: LSSPDILIAPLARFLGAPVYIVQ*FHAKHD
Trigger: ATCGTGCTTAGCATGAAACCATTGCACAATATAAAC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGAGGGCCTGTAAGCTATaGGTCTGTACGATAATGCAG +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQRACKL*VCTIMQ
Trigger: CTGCATTATCGTACAGACTCATAGCTTACAGGCCCT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCTCACAAAATAGTAAATaGATAGCCTGCAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICSQNSK*IACSVS
Trigger: GGACACGCTGCAGGCTATTCATTTACTATTTTGTGA...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGTACTCCAACCGCTCCTaGATAAGGGCATCATCTTTG +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQYSNRS*IRASSL
Trigger: CAAAGATGATGCCCTTATTCAGGAGCGGTTGGAGTA...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGCTCCTTGGTCTTGTTaGAAGCCGTACATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIAPWSC*KPYMGC
Trigger: GCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTACTTGCAAAGTAGGGTaGTCTTGCAAGAGACAAATG +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFTCKVG*SCKRQM
Trigger: CATTTGTCTCTTGCAAGATCACCCTACTTTGCAAGT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTATTACCACAACAGTCTaGTGGCAGTGTAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFITTTV*WQCSAS
Trigger: GGAAGCACTACACTGCCATCAGACTGTTGTGGTAAT...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGAACCCAGGTGCCTATGTaGGGAGAAGGGATGCCACTC +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRTQVPM*GEGMPL
Trigger: GAGTGGCATCCCTTCTCCTCACATAGGCACCTGGGT...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGTCGAGGCTGTAGATTaGGAGTCTTGCCACATGCCC +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIVEAVD*ESCHMP
Trigger: GGGCATGTGGCAAGACTCTCAATCTACAGCCTCGAC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGCCCGGCCTATTTTCTaGAATTCTAATAACAGGGTA +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFARPIF*NSNNRV
Trigger: TACCCTGTTATTAGAATTTCAGAAAATAGGCCGGGC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTACCTCCAGTAAAGCTTaGCAAGCTCCAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVTSSKA*QAPRCF
Trigger: GAAACATCTTGGAGCTTGTCAAGCTTTACTGGAGGT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGAGACGGAAAACTGTATaGTTCAAACATCTCGACTTT +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLRRKTV*FKHLDF
Trigger: AAAGTCGAGATGTTTGAATCATACAGTTTTCCGTCT...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTGTGATGTTTACAGAATaGCTGGTCCTCAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVVMFTE*LVLSSI
Trigger: TATGCTGCTGAGGACCAGTCATTCTGTAAACATCAC...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAGGGAGACACTCCTTTTaGTCAAAAGAGAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRGRHSF*SKENFH
Trigger: ATGGAAATTCTCTTTTGATCAAAAGGAGTGTCTCCC...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGACACACTTACAATCTaGACGCTAAAGGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFDTLTI*TLKGCL
Trigger: CAAACATCCCTTTAGCGTTCAGATTGTAAGTGTGTC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGAATGGCAAATGCGTCTaGAATCTGGGGAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQNGKCV*NLGSLV
Trigger: TACAAGGCTCCCCAGATTGCAGACGCATTTGCCATT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCAAGCCGTACATGGGCTaGATAGGATTTCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCKPYMG*IGFLSK
Trigger: TTTTGACAGAAATCCTATGCAGCCCATGTACGGCTT...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAAAAATGACATTGGATTaGCGAGACAAAGGAACGTTG +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREKMTLD*RDKGTL
Trigger: CAACGTTCCTTTGTCTCGGCAATCCAATGTCATTTT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAGCTCAACACACAAAGTaGTCATTTTCTAGACTCACA +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRAQHTK*SFSRLT
Trigger: TGTGAGTCTAGAAAATGAGCACTTTGTGTGTTGAGC...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGTTTCATCAGGATATTTaGAGTCATGTGGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLFHQDI*SHVDSL
Trigger: AAGACTGTCCACATGACTGCAAATATCCTGATGAAA...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTAGCAGGTTTATATTGTaGAATGGTTTCATGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSSRFIL*NGFMLS
Trigger: GCTTAGCATGAAACCATTGCACAATATAAACCTGCT...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGATACTCCACACACTGTaGTTCAAACTAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQILHTL*FKLGHW
Trigger: CCAGTGCCCTAGTTTGAAGCACAGTGTGTGGAGTAT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTCCGAGCTGCAAGATGTaGATGAGTGACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIPSCKM*MSDCRS
Trigger: GCTCCTGCAGTCACTCATCCACATCTTGCAGCTCGG...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTACAACACTGCGGTTGTTaGAGATGGACCGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVQHCGC*RWTVGC
Trigger: GCACCCTACGGTCCATCTCCAACAACCGCAGTGTTG...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTTGTGTAGACAACATTTaGGTTTGCTGTCCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFCVDNI*VCCPLD
Trigger: ATCCAACGGACAGCAAACCCAAATGTTGTCTACACA...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTTCATTCTCAGTTGTTTaGGGCTTCCACGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFSFSVV*GFHVSP
Trigger: AGGACTGACGTGGAAGCCCCAAACAACTGAGAATGA...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAACATCTTTGATTTCCTaGGAAACATTGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLATSLIS*ETLASL
Trigger: AAGACTGGCCAATGTTTCCCAGGAAATCAAAGATGT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCTGGGGACACAGTCTCTaGATGACACACCCATTACAG +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRWGHSL*MTHPLQ
Trigger: CTGTAATGGGTGTGTCATCCAGAGACTGTGTCCCCA...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCTGTTGGTCTTATAGATaGACTGTAAGCTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCCWSYR*TVSLGW
Trigger: CCAACCCAAGCTTACAGTCCATCTATAAGACCAACA...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAACACACAATGGCATTTTaGTCAATAATAGACTGCACA +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEHTMAF*SIIDCT
Trigger: TGTGCAGTCTATTATTGACCAAAATGCCATTGTGTG...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGAGAGAAGTCACCTATTaGAAAACTCTTCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLREVTY*KTLHFG
Trigger: TCCAAAGTGAAGAGTTTTCCAATAGGTGACTTCTCT...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCTACCTATGTGGGCTCTaGGGTTCAGAAAATGAACAT +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICYLCGL*GSENEH
Trigger: ATGTTCATTTTCTGAACCCCAGAGCCCACATAGGTA...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp ATCAGATTCGTGATCTTTGAGCTCGTAACCAAGGTTTaGCAGGGCCTGAGAAGCAACAGGATAGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: IRFVIFELVTKV*QGLRSNRIANS
Trigger: GGAATTGGCTATCCTGTTGCTTCTCAGGCCCTGCAAAACCTTGGTTACGAGCTCAAAGATCACGAATCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTCGCTGTCCTCGGTGCTaGAATCGTGCACAAACCAGC +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSRCPRC*NRAQTS
Trigger: GCTGGTTTGTGCACGATTTCAGCACCGAGGACAGCG...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCACCAGTGAAGGACGATaGAGATCCCAAAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRTSEGR*RSQSTA
Trigger: AGCTGTACTTTGGGATCTTCATCGTCCTTCACTGGT...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAGAAATGTGTAGAAAATaGACCACTCCATCAATGCTA +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREEMCRK*TTPSML
Trigger: TAGCATTGATGGAGTGGTTCATTTTCTACACATTTC...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGACACAGTCTCTGGATaGCACACCCATTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIDTVSG*HTHYRW
Trigger: CCACCTGTAATGGGTGTGTCATCCAGAGACTGTGTC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGACTCACAGATGGCAGTaGGGACTAAATGAAACCACA +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQTHRWQ*GLNETT
Trigger: TGTGGTTTCATTTAGTCCTCACTGCCATCTGTGAGT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCTAATAGCCAGACTATaGGCTATTCCAGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVLIARL*AIPVQL
Trigger: AAGTTGCACTGGAATAGCTCATAGTCTGGCTATTAG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCAAAGAAAAGCAAAACTaGATTGGGCTGGTACACACA +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICKEKQN*IGLVHT
Trigger: TGTGTGTACCAGCCCAATTCAGTTTTGCTTTTCTTT...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGACATGAAGCCATATCATaGAAACATTATCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRHEAIS*KHYLLC
Trigger: GCAAAGCAGATAATGTTTTCATGATATGGCTTCATG...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAAACAACTTTGCCTCATaGAGCCATATCATGAAAACA +
Preference number: 4 (lower is better)
Translates to: CHAAQCCSSGHWRKGFRENNFAS*SHIMKT
Trigger: TGTTTTCATGATATGGCTTCATGAGGCAAAGTTGTT...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGCTCCAAGCACAAGATaGTTTCAAACCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFAPSTR*FQTHFS
Trigger: TGAGAAGTGGGTTTGAAATCATCTTGTGCTTGGAGC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAAAAGCATCACATATGTaGTGTTTACAGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRKASHM*CLQNDW
Trigger: CCAGTCATTCTGTAAACATCACATATGTGATGCTTT...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTAACATGTCTCTCCCATaGTGGGTACCTATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFNMSLP*WVPIPE
Trigger: TTCAGGAATAGGTACCCAGCATGGGAGAGACATGTT...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTTGGGAATCAGAGCTTTaGATCAAGAAAAGTCACCTA +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFWESEL*IKKSHL
Trigger: TAGGTGACTTTTCTTGATGCAAAGCTCTGATTCCCA...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTCTTTTAGGGGGCTCATaGCACTCATTCTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFLLGGS*HSFSVV
Trigger: AACAACTGAGAATGAGTGGCATGAGCCCCCTAAAAG...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR GCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGATCTTTAACAATCTGCTaGTTATATATGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRSLTIC*LYMWEA
Trigger: GGCTTCCCACATATATAAGCAGCAGATTGTTAAAGA...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGAGTGGTAACCAGTTGGTaGTTGGAAATTGGCATGACA +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRVVTSW*LEIGMT
Trigger: TGTCATGCCAATTTCCAAGCACCAACTGGTTACCAC...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCATCCCAAAGTACAGCTaGAAAACCGAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRIPKYS*KTEAKR
Trigger: CCTCTTTGCCTCGGTTTTCCAGCTGTACTTTGGGAT...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGACTTTGACCTTGGATTaGGGGGAGGAAAAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQTLTLD*GEEKSV
Trigger: TACAGACTTTTCCTCCCCCCAATCCAAGGTCAAAGT...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTACATCTTTGATTTCCTaGGAAACATTGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFTSLIS*ETLASL
Trigger: AAGACTGGCCAATGTTTCCCAGGAAATCAAAGATGT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCGACAGTTGCCTGGAATaGAAGAATAGCATTTATCTG +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICDSCLE*KNSIYL
Trigger: CAGATAAATGCTATTCTTCCATTCCAGGCAACTGTC...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAATTCAGTCTGCTTAATTaGATGAAAACAGCATACACA +
Preference number: 4 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEFSLLN*MKTAYT
Trigger: TGTGTATGCTGTTTTCATCCAATTAAGCAGACTGAA...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACTTCATCACCATACTTaGGCCTCTACATTAATAGAT +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRLHHHT*ASTLID
Trigger: ATCTATTAATGTAGAGGCCCAAGTATGGTGATGAAG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAGGTTCCGCAATCATCTaGAAAATTCAGATGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRGSAII*KIQMLK
Trigger: TTTCAACATCTGAATTTTCCAGATGATTGCGGAACC...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTAAAGCAAAACTGAATTaGGCTGGTACACACATCTGC +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVKAKLN*AGTHIC
Trigger: GCAGATGTGTGTACCAGCCCAATTCAGTTTTGCTTT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCAAGCATCTGAATGTCTaGATGAAAGGAGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCKHLNV*MKGVVS
Trigger: TGAGACAACTCCTTTCATCCAGACATTCAGATGCTT...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTATTCAGCGTGCTATTTaGTTTCAAAGAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSIQRAI*FQREKK
Trigger: TTTCTTCTCTCTTTGAAACCAAATAGCACGCTGAAT...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp ATTGATTTGGGGCTTTGTACCAAAAGAAGTCCTAGGTaGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: IDLGLCTKRSPR*SPLLLPVDVIV
Trigger: CACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCTAGGACTTCTTTTGGTACAAAGCCCCAAATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTTCACAAAATAGTAAATaGATAGCCTGCAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFSQNSK*IACSVS
Trigger: GGACACGCTGCAGGCTATTCATTTACTATTTTGTGA...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR TCA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCGATTGTTTTCAAAAATaGCATTGGATTGCCGAGACA +
Preference number: 4 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICDCFQK*HWIAET
Trigger: TGTCTCGGCAATCCAATGTCATTTTTGAAAACAATC...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGCTAGTTCTGAAAACTaGCTCGCCGTGATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIASSEN*LAVMLV
Trigger: CACTAGCATCACGGCGAGTCAGTTTTCAGAACTAGC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGTATTCTCTGCTTGGTaGGTTGTTGCTGTTGTATTC +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFVFSAW*VVAVVF
Trigger: GAATACAACAGCAACAACTCACCAAGCAGAGAATAC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTCTTGCTGGCGTTAGATaGTTGCCTTTGCGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSLAGVR*LPLRRG
Trigger: TCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAG...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGAGGATGTTGTGGGTCCTaGAACTCCTTTTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRGCCGS*NSFCFI
Trigger: TATAAAGCAAAAGGAGTTGCAGGACCCACAACATCC...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTTATGGCCACAGCCCTaGTGTCACCCCTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSLWPQP*CHPFIW
Trigger: CCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGAGACAACATTTGGGTTTaGTGTCCGTTGGATAGGATT +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRDNIWV*CPLDRI
Trigger: AATCCTATCCAACGGACAGCAAACCCAAATGTTGTC...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACCACTTCCTCCGTGCTaGACACAGCTCTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTPLPPC*TQLSSV
Trigger: AACAGAAGAGAGCTGTGTGCAGCACGGAGGAAGTGG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAGGGAAAAATGTAATTTaGATATCCTTCATCGACTCT +
Preference number: 4 (lower is better)
Translates to: SFFQVESETLGCSCFGRRGKNVI*ISFIDS
Trigger: AGAGTCGATGAAGGATATGCAAATTACATTTTTCCC...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCGTTTTTATATTCCTGTaGGAATCAGAGCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCVFIFL*ESELCI
Trigger: GATGCAAAGCTCTGATTCCCACAGGAATATAAAAAC...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGTTTTTATATTCCTGTaGGAATCAGAGCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFVFIFL*ESELCI
Trigger: GATGCAAAGCTCTGATTCCCACAGGAATATAAAAAC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGTCAGCATCTGCCTATaGTCACACAGAGCCACTCAT +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVVSICL*SHRATH
Trigger: ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGAC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTCTCTGTTACTTCCTGTaGATGTCATCGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNILCYFL*MSSWGH
Trigger: GTGTCCCCACGATGACATCCACAGGAAGTAACAGAG...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTATGCAAATGGCTATTTaGCACTTCTTCCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFMQMAI*HFFHVA
Trigger: AGCCACATGGAAGAAGTGCCAAATAGCCATTTGCAT...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTCACAAGTACTTACCATaGTGTTACAGTTGCCTACAG +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFHKYLP*CYSCLQ
Trigger: CTGTAGGCAACTGTAACACCATGGTAAGTACTTGTG...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTACTCCTTGTCTACTTTaGTTTAGTGACGATGGTTCC +
Preference number: 4 (lower is better)
Translates to: RKSLYTVENLIARSLACFTPCLL*FSDDGS
Trigger: GGAACCATCGTCACTAAACCAAAGTAGACAAGGAGT...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGCACTGTGCTCATACTaGGGGAAATGTCTACACCGT +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVALCSY*GKCLHR
Trigger: ACGGTGTAGACATTTCCCCCAGTATGAGCACAGTGC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp AGTGATGAAGAACCATTGTATTCTCTGCTTGGTGAGTaGTTGCTGTTGTATTCCTCAGACTCCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SDEEPLYSLLGE*LLLYSSDSTSS
Trigger: GGAGGAAGTGGAGTCTGAGGAATACAACAGCAACAACTCACCAAGCAGAGAATACAATGGTTCTTCATCACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACAGTTAAAAAGCTGCTaGACACCACACACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRQLKSC*TPHTAL
Trigger: CAGCGCTGTGTGTGGTGTTCAGCAGCTTTTTAACTG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTAGAGGTCAAACTTGTTaGATAAATGACTCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVRGQTC*INDSGK
Trigger: TTTCCCTGAGTCATTTATTCAACAAGTTTGACCTCT...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACAGGAATGGCATTTTTaGACAATCAGAATGTCATGC +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRQEWHF*TIRMSC
Trigger: GCATGACATTCTGATTGTGCAAAAATGCCATTCCTG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAACCCATTACAGGTGGTaGCTAGAGAACTGGACTACT +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVTHYRW*LENWTT
Trigger: AGTAGTCCAGTTCTCTAGCCACCACCTGTAATGGGT...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACACACCCATTACAGGTaGTGGCTAGAGAACTGGACT +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRHTHYR*WLENWT
Trigger: AGTCCAGTTCTCTAGCCACCACCTGTAATGGGTGTG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACAAAAGCTTTACATTTaGGGGCCAGGTCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTQKLYI*GPGHCL
Trigger: CAGGCAGTGACCTGGCCCCCAAATGTAAAGCTTTTG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTAAAACTTGTCACTTTTaGGGAAGTTGTACAGGATAT +
Preference number: 4 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFKTCHF*GSCTGY
Trigger: ATATCCTGTACAACTTCCCCAAAAGTGACAAGTTTT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TCTTCCATGTGGCTCTCTGCTGTGAGAGCAGGCTGCTaGCATGTTAGACTAATTGCTTCAATTAGCAAAATT +
Preference number: 4 (lower is better)
Translates to: SSMWLSAVRAGC*HVRLIASISKI
Trigger: AATTTTGCTAATTGAAGCAATTAGTCTAACATGCAAGCAGCCTGCTCTCACAGCAGAGAGCCACATGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TTCCAGTGCAACTTTCCTTTTGTGCTTGACTGTGCATaGCCTAGCCAAATGAGTTGTAGAGGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: FQCNFPFVLDCA*PSQMSCRGQTC
Trigger: ACAAGTTTGACCTCTACAACTCATTTGGCTAGGCAATGCACAGTCAAGCACAAAAGGAAAGTTGCACTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp GCTTGTGTAAGCACACTCCATCACACAATGACAAAATaGCCTGACGATGCATATCTCAGAACATATCCCCAT +
Preference number: 4 (lower is better)
Translates to: ACVSTLHHTMTK*PDDAYLRTYPH
Trigger: ATGGGGATATGTTCTGAGATATGCATCGTCAGGCAATTTTGTCATTGTGTGATGGAGTGTGCTTACACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGAAAAGAAGTCCTAGGTTaGGCCCTCTGTTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRKEVLG*ALCYFL
Trigger: CAGGAAGTAACAGAGGGCTCAACCTAGGACTTCTTT...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACTGGGCCTTTACTGGTaGCTAGGTAATCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRLGLYW*LGNLST
Trigger: TGTGGAAAGATTACCTAGTCACCAGTAAAGGCCCAG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGACAGTGTAGTGCTTCCTaGATCATGGAAGCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRQCSAS*IMEARL
Trigger: TAGCCTTGCTTCCATGATTCAGGAAGCACTACACTG...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGAGACAAAGGAACGTTaGTCTGCATCTGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIETKER*SASVTE
Trigger: TTCAGTGACAGATGCAGATCAACGTTCCTTTGTCTC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTACTATGGATGAGCCACTaGCAGGTTTTCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVLWMSH*QVFSSS
Trigger: TGATGAAGAGAAAACCTGTCAGTGGCTCATCCATAG...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCTTACCCATGAACCTTaGTTAAGAGGACTATTTATT +
Preference number: 4 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVLTHEP*LRGLFI
Trigger: AATAAATAGTCCTCTTAAGCAAGGTTCATGGGTAAG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTCACTGGAGCATCAGGTaGGAGGAGTGTTATGAGTCA +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSHWSIR*EECYES
Trigger: TGACTCATAACACTCCTCCCACCTGATGCTCCAGTG...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGAGAGTTCCATGTGGTCTaGAAAGCCTTGAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCREFHVV*KALKRG
Trigger: GCCTCTTTTCAAGGCTTTCCAGACCACATGGAACTC...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCTGGGTTTGTGTTGATTaGTTGACTCTATTAGACTGT +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRWVCVD*LTLLDC
Trigger: ACAGTCTAATAGAGTCAATCAATCAACACAAACCCA...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCCAAAGTCAGTGCTATTaGACTAGACAGTATGTAGTT +
Preference number: 4 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRQSQCY*TRQYVV
Trigger: AACTACATACTGTCTAGTTCAATAGCACTGACTTTG...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGAGATACACAGACTAGGTaGCTGGCAGAATTGAGATTC +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRDTQTR*LAELRF
Trigger: GAATCTCAATTCTGCCAGTCACCTAGTCTGTGTATC...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTACCAAATTTACCACTTaGGTGATCTACTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNITKFTT*VIYLAT
Trigger: AGTGGCCAAGTAGATCACTCAAGTGGTAAATTTGGT...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACCTAAGTATATTGTGTaGAAATATCTCCAGATTTGC +
Preference number: 4 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRPKYIV*KYLQIC
Trigger: GCAAATCTGGAGATATTTCCACACAATATACTTAGG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTCTTGAGGGCTATCAATaGTCCAGTGGTTTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNILEGYQ*SSGFVY
Trigger: ATAGACAAAACCACTGGACCATTGATAGCCCTCAAG...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTTATAGGCCTCAAGGTTaGCAAAAGCTTTACATTTGG +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIYRPQG*QKLYIW
Trigger: CCAAATGTAAAGCTTTTGTCAACCTTGAGGCCTATA...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAAATTTACCACTTGAGTaGTCTACTTGGCCACTTTTC +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVNLPLE*STWPLF
Trigger: GAAAAGTGGCCAAGTAGATCACTCAAGTGGTAAATT...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACACGGGGAACGTTTACTTaGTGTACGGAGGTATTTAAA +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTRGTFT*CTEVFK
Trigger: TTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCG...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGCCCTAAATTCAGCGTaGTATTTGGTTTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVALNSA*YLVSKR
Trigger: TCTCTTTGAAACCAAATAGCACGCTGAATTTAGGGC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTAATTCTGTCTCACAGTaGACGATCCAGAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSNSVSQ*TIQKVM
Trigger: CATGACCTTCTGGATCGTCCACTGTGAGACAGAATT...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGATCCTTAGAGGGCCAATaGGTTTATATATTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRSLEGQ*VYIFPD
Trigger: GTCAGGGAATATATAAACCCATTGGCCCTCTAAGGA...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGGACTGAGAAATTACTaGTCCATTCTCTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIGLRNY*SILFHL
Trigger: CAAATGGAAGAGAATGGACCAGTAATTTCTCAGTCC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACAGGTTCTGCACAAAAGTaGAGAATTTGCCAAAATCGT +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTGSAQK*RICQNR
Trigger: ACGATTTTGGCAAATTCTTCACTTTTGTGCAGAACC...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTGTTCCTAGACTTATATaGTTGTTCAAGCTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIVPRLI*LFKLVV
Trigger: AACCACTAGCTTGAACAATCATATAAGTCTAGGAAC...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAATGCTATATCTAAAGTaGGAAGGGAAAGAACACATC +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVMLYLK*EGKEHI
Trigger: GATGTGTTCTTTCCCTTCTCACTTTAGATATAGCAT...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTTCCTTAAGTGACACATaGCTGCATAGTCTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNISLSDT*LHSLRK
Trigger: TTTTCTAAGACTATGCAGTCATGTGTCACTTAAGGA...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTAGGTTAATTGCTAAGTaGATGCAACAGCGCTCAACA +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSRLIAK*MQQRST
Trigger: TGTTGAGCGCTGTTGCATTCACTTAGCAATTAACCT...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTACCAAACATGTGGATTTaGATCCATTTAAAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVPNMWI*IHLKQV
Trigger: GACTTGCTTTAAATGGATTCAAATCCACATGTTTGG...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGATGGAGGATCAAATCATaGAGTACTAGGAAGTATGTC +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRWRIKS*STRKYV
Trigger: GACATACTTCCTAGTACTCCATGATTTGATCCTCCA...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTATCTCAATGTGGGAGATaGAACCATAAGAAAGTCTAT +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVSQCGR*NHKKVY
Trigger: ATAGACTTTCTTATGGTTCCATCTCCCACATTGAGA...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAGAAAAGAGTAAGAGCTaGCGTCAGAAAACTATGATT +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVEKSKS*RQKTMI
Trigger: AATCATAGTTTTCTGACGCCAGCTCTTACTCTTTTC...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TTAATTTACATCATGAAGTTATTGAGCTCCTTGGTCTaGTTGAAAGCCGTACATGGGCTGCATAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: LIYIMKLLSSLV*LKAVHGLHRIS
Trigger: AGAAATCCTATGCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAATAACTTCATGATGTAAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 72 bp TACTATTTAATTTACATCATGAAGTTATTGAGCTCCTaGGTCTTGTTGAAAGCCGTACATGGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: YYLIYIMKLLSS*VLLKAVHGLHR
Trigger: CCTATGCAGCCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAATAACTTCATGATGTAAATTAAATAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
3UTR CAA 72 bp ACCCATTACAGGTGGTGGCTAGAGAACTGGACTACTTaGTGTGAATTAGATCCAAATAACCGAATAATTAAG +
Preference number: 4 (lower is better)
Translates to: THYRWWLENWTT*CELDPNNRIIK
Trigger: CTTAATTATTCGGTTATTTGGATCTAATTCACACAAAGTAGTCCAGTTCTCTAGCCACCACCTGTAATGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp GATATCACTAAATATTCCCATGTTTGTGGTAACCAGTaGGTGCTTGGAAATTGGCATGACATCAACAAACCA +
Preference number: 4 (lower is better)
Translates to: DITKYSHVCGNQ*VLGNWHDINKP
Trigger: TGGTTTGTTGATGTCATGCCAATTTCCAAGCACCAACTGGTTACCACAAACATGGGAATATTTAGTGATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR TCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACAAGCAGCATAATCACATaGATCTTTGCTGAAAATGGT +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTSSIIT*IFAENG
Trigger: ACCATTTTCAGCAAAGATTCATGTGATTATGCTGCT...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTTTTCTTCTGAAGACTTaGCAAATCAGGACTAGATTT +
Preference number: 4 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIFLLKT*QIRTRF
Trigger: AAATCTAGTCCTGATTTGGCAAGTCTTCAGAAGAAA...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGCGTTCTACTGGTGTaGGATCAAAATAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTCVLLV*DQNRNF
Trigger: AAAATTCCTATTTTGATCGCACACCAGTAGAACGCA...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTAAAGAGGACTATTTATTaGTCCTATATTCCCACGATT +
Preference number: 4 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVKRTIY*SYIPTI
Trigger: AATCGTGGGAATATAGGAGCAATAAATAGTCCTCTT...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR GCA 90 bp GCTGAAGTCTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATCCCCTCAATATCTTTaGATAGTTGAATACCTTTCC +
Preference number: 4 (lower is better)
Translates to: AEVSFLPVMRCIAYISSTSPQYL*IVEYLS
Trigger: GGAAAGGTATTCAACTATGCAAAGATATTGAGGGGA...TGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAGACTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTTGGTGCTTGGAAATTaGCATGACATCAACAAACCA +
Preference number: 4 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSLVLGN*HDINKP
Trigger: TGGTTTGTTGATGTCATGCCAATTTCCAAGCACCAA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CCA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGAAAAATCCTTGCCATTTaGGAGCAGGTTTATATTGTG +
Preference number: 4 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRKILAI*EQVYIV
Trigger: CACAATATAAACCTGCTCCCAAATGGCAAGGATTTT...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TATTTAAATACACAAGTACTTACCATGGTGTTACAGTaGCCTACAGTATTCGGTACAGTAGCATGCTGTACA +
Preference number: 4 (lower is better)
Translates to: YLNTQVLTMVLQ*PTVFGTVACCT
Trigger: TGTACAGCATGCTACTGTACCGAATACTGTAGGCAACTGTAACACCATGGTAAGTACTTGTGTATTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TTGAGGGCTATCAATGGTCCAGTGGTTTTGTCTATGTaGAAAAATTGCTTAACTGTTCATTTCTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LRAINGPVVLSM*KNCLTVHFFPP
Trigger: AGGTGGAAAGAAATGAACAGTTAAGCAATTTTTCAACATAGACAAAACCACTGGACCATTGATAGCCCTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp AATCAGAGCTTGAGGGCTATCAATGGTCCAGTGGTTTaGTCTATGTTGAAAAATTGCTTAACTGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: NQSLRAINGPVV*SMLKNCLTVHF
Trigger: GAAATGAACAGTTAAGCAATTTTTCAACATAGACAAAACCACTGGACCATTGATAGCCCTCAAGCTCTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
3UTR CAA 72 bp TTAAGAACAAATATTGGTAGCAAAAATCCTTGCCATTaGGGAGCAGGTTTATATTGTGCAATGGTTTCATGC +
Preference number: 4 (lower is better)
Translates to: LRTNIGSKNPCH*GAGLYCAMVSC
Trigger: GCATGAAACCATTGCACAATATAAACCTGCTCCCAAATGGCAAGGATTTTTGCTACCAATATTTGTTCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS GCA 90 bp CCAGGATCCAGAGGCAGTCCCACAGTGAGTAGCGCCGCTGCTCCCTaGCCAGGCGCAGGCACAGCGCAGCCGAGCCCGCCCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PGSRGSPTVSSAAAP*PGAGTAQPSPPRRR
Trigger: GCGGCGGCGGGGCGGGCTCGGCTGCGCTGTGCCTGCGCCTGGGCAGGGAGCAGCGGCGCTACTCACTGTGGGACTGCCTCTGGATCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 90 bp GAAGTACACGGCCACGGCGGCCAGGATCCAGAGGCAGTCCCACAGTaGGTAGCGCCGCTGCTCCCTGCCCAGGCGCAGGCACAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: EVHGHGGQDPEAVPQ*VAPLLPAQAQAQRS
Trigger: GCTGCGCTGTGCCTGCGCCTGGGCAGGGAGCAGCGGCGCTACTCACTGTGGGACTGCCTCTGGATCCTGGCCGCCGTGGCCGTGTACTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 90 bp TCGTCCTCGGCTCCCGACCCCGACGGCAAGCCTGGAGCCAATCCCTaGACCGAGCCCGAGTGGTCCGAGTTCTGCAGCGGGGTGAACGCC +
Preference number: 5 (lower is better)
Translates to: SSSAPDPDGKPGANP*TEPEWSEFCSGVNA
Trigger: GGCGTTCACCCCGCTGCAGAACTCGGACCACTCGGGCTCGGTGCAGGGATTGGCTCCAGGCTTGCCGTCGGGGTCGGGAGCCGAGGACGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 90 bp AGCGCTGGCCGCGCAGGTAGTAGTCCACGGCGAGCCAGACGTCTGTaGCCACGTCCGCGAAGTACACGGCCACGGCGGCCAGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: SAGRAGSSPRRARRL*PRPRSTRPRRPGSR
Trigger: TCTGGATCCTGGCCGCCGTGGCCGTGTACTTCGCGGACGTGGGCACAGACGTCTGGCTCGCCGTGGACTACTACCTGCGCGGCCAGCGCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 90 bp TGCTTGCCTTTGCGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGCTaGAGACCCACCGCCGACCACCGTCTTGCAATCGGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CLPLRRGRTSLAFPG*RPTADHRLAIGSRL
Trigger: CAGCCTGGAGCCGATTGCAAGACGGTGGTCGGCGGTGGGTCTGCAGCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 90 bp GCTGCCGCTGTTGGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATaGTTGCCTTTGCGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: AAAVGRGDVALAGVR*LPLRRGRTSLAFPG
Trigger: GCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAACAGCGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 90 bp CCGCTGTTGGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATGCTTaGCTTTGCGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PLLAAAMLLLLALDA*LCGVEGRASPSPAA
Trigger: TGCAGCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAACAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 90 bp AGTGACTGCAGGAGCCAGATGCAGAAGGAGCAGGACGCAGACCTGTaGTTGCCACTGGCCCGGGTAGCCCCGCTGCTGTTGCTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SDCRSQMQKEQDADL*LPLARVAPLLLLPL
Trigger: CAGCGGCAGCAACAGCAGCGGGGCTACCCGGGCCAGTGGCAAGCACAGGTCTGCGTCCTGCTCCTTCTGCATCTGGCTCCTGCAGTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGACGCAGACCTGTGCTaGCCACTGGCCCGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHDADLC*PLARVA
Trigger: GGCTACCCGGGCCAGTGGCAAGCACAGGTCTGCGTC...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 90 bp TTGGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATGCTTGCCTTTaGGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGCTGCAGACCCA +
Preference number: 5 (lower is better)
Translates to: LAAAMLLLLALDACL*GVEGRASPSPAADP
Trigger: TGGGTCTGCAGCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCGCGGAAGCTGAACACTaGCACCGACAGAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIAEAEH*HRQRAE
Trigger: CTCGGCTCTCTGTCGGTGCAAGTGTTCAGCTTCCGC...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 90 bp TGGAGATGGACCGTAGGGTGCTTGTGGCCACGTCTGGGGGCAAAGTaGAGGCAGCGGCTGGGTCCTCACAAGCACAACTTGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: WRWTVGCLWPRLGAK*RQRLGPHKHNLVTA
Trigger: GGCAGTCACCAAGTTGTGCTTGTGAGGACCCAGCCGCTGCCTTCACTTTGCCCCCAGACGTGGCCACAAGCACCCTACGGTCCATCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCCTGTTGCTGCCGCTGTaGGCCGCGGCGATGTTGCTC +
Preference number: 5 (lower is better)
Translates to: VARSLPESASAYGHTEPLLLLPL*AAAMLL
Trigger: GAGCAACATCGCCGCGGCCAACAGCGGCAGCAACAG...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCACAACACTGCGGTTGTaGGAGATGGACCGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: ARAALPLCPNGRCTCLGITTLRL*EMDRRV
Trigger: CACCCTACGGTCCATCTCCAACAACCGCAGTGTTGT...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCCGTGCAGGAGGAGTTaGGTAGCAATGGAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAPCRRS*VAMESP
Trigger: AGGACTCTCCATTGCTACCAAACTCCTCCTGCACGG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCCTGGGGGCACCAACTaGCAAAGTAGGGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAPGGTN*QSRVIL
Trigger: CAAGATCACCCTACTTTGCAAGTTGGTGCCCCCAGG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCCCTTCATCTGGATGTaGTGGGTCCTGCAACTCCTT +
Preference number: 5 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIPFIWM*WVLQLL
Trigger: AAGGAGTTGCAGGACCCACAACATCCAGATGAAGGG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTCGGGTGCAGCTGCTTaGGAAGGAGACCAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: GTESSRVSICLWSHRATHSGAAA*EGDQPP
Trigger: GGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCGA...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCGGGATTAGGGCTCAGTaGTGCAGAGATTCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAGIRAQ*CRDSQF
Trigger: GAACTGGGAATCTCTGCACAACTGAGCCCTAATCCC...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACCGCCGACCACCGTCTaGCAATCGGCTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAPPTTV*QSAPGC
Trigger: GCAGCCTGGAGCCGATTGCAAGACGGTGGTCGGCGG...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGTGGACCGTAGGGTGCTaGTGGCCACGTCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLWTVGC*WPRLGA
Trigger: TGCCCCCAGACGTGGCCACAAGCACCCTACGGTCCA...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCCTTTGTACTGCAGCCTaGGAGGAGATGGGGAACATT +
Preference number: 5 (lower is better)
Translates to: ARAALPLCPNGRCTCLGILCTAA*EEMGNI
Trigger: AATGTTCCCCATCTCCTCCAAGGCTGCAGTACAAAG...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCTTGAGCTCCTTGGTCTaGTTGAAAGCCGTACATGGG +
Preference number: 5 (lower is better)
Translates to: RLETDPVPAHSSGSRRTALSSLV*LKAVHG
Trigger: CCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAA...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 90 bp CAGGTACACACCCATCCCGCTCTGCGAATTTCTGATCGCGGTCGCTaGCAACACTGCGGTTGTTGGAGATGGACCGTAGGGTGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: QVHTHPALRISDRGR*QHCGCWRWTVGCLW
Trigger: CCACAAGCACCCTACGGTCCATCTCCAACAACCGCAGTGTTGTCAGCGACCGCGATCAGAAATTCGCAGAGCGGGATGGGTGTGTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGACGCAGACCTGTGCTaGCCACTGGCCCGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFDADLC*PLARVA
Trigger: GGCTACCCGGGCCAGTGGCAAGCACAGGTCTGCGTC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGATGGACCGTAGGGTGCTaGTGGCCACGTCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRWTVGC*WPRLGA
Trigger: TGCCCCCAGACGTGGCCACAAGCACCCTACGGTCCA...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCTTTGTACTGCAGCCTaGGAGGAGATGGGGAACATT +
Preference number: 5 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHLCTAA*EEMGNI
Trigger: AATGTTCCCCATCTCCTCCAAGGCTGCAGTACAAAG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTTGAGCTCCTTGGTCTaGTTGAAAGCCGTACATGGG +
Preference number: 5 (lower is better)
Translates to: APHCRYVPMGAAHAWESDLSSLV*LKAVHG
Trigger: CCCATGTACGGCTTTCAACAAGACCAAGGAGCTCAA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCGTGCTTGACTGTGCATaGCCTAGCCAAATGAGTTGT +
Preference number: 5 (lower is better)
Translates to: ARAALPLCPNGRCTCLGIVLDCA*PSQMSC
Trigger: ACAACTCATTTGGCTAGGCAATGCACAGTCAAGCAC...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGGCGGAAGCTGAACACTaGCACCGACAGAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLAEAEH*HRQRAE
Trigger: CTCGGCTCTCTGTCGGTGCAAGTGTTCAGCTTCCGC...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGGCTGGCGTTAGATGCTaGCCTTTGCGGCGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLAGVRC*PLRRGR
Trigger: CCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGC...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS GCA 90 bp AAAGCTGCTGAACACCACACACAGCGCTGGAATGGCAAATGCGTCTaGAATCTGGGGAGCCTTGTAGAGGTACCAGAGGGCACTCAAGGC +
Preference number: 5 (lower is better)
Translates to: KAAEHHTQRWNGKCV*NLGSLVEVPEGTQG
Trigger: GCCTTGAGTGCCCTCTGGTACCTCTACAAGGCTCCCCAGATTGCAGACGCATTTGCCATTCCAGCGCTGTGTGTGGTGTTCAGCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACCGCCGACCACCGTCTaGCAATCGGCTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRPPTTV*QSAPGC
Trigger: GCAGCCTGGAGCCGATTGCAAGACGGTGGTCGGCGG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAGCTGGCGTTAGATGCTaGCCTTTGCGGCGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRAGVRC*PLRRGR
Trigger: CCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGC...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCTGTTGCTGCCGCTGTaGGCCGCGGCGATGTTGCTC +
Preference number: 5 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVLLLPL*AAAMLL
Trigger: GAGCAACATCGCCGCGGCCAACAGCGGCAGCAACAG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGACTGTAAGCTTGGGTaGGTTTTGAAAAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: APHCRYVPMGAAHAWESDDCKLG*VLKKEQ
Trigger: CTGCTCCTTTTTCAAAACCAACCCAAGCTTACAGTC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGAAATGGATCTCGGTTaGGAACTGCTAATGTCACCA +
Preference number: 5 (lower is better)
Translates to: APHCRYVPMGAAHAWESDEMDLG*ELLMSP
Trigger: TGGTGACATTAGCAGTTCCAAACCGAGATCCATTTC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACTCGTAACCAAGGTTTaGCAGGGCCTGAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPLVTKV*QGLRSN
Trigger: GTTGCTTCTCAGGCCCTGCAAAACCTTGGTTACGAG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCTTCATTGCTGGGCAATaGAAAATAAGTCACGTGCAC +
Preference number: 5 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAFIAGQ*KISHVH
Trigger: GTGCACGTGACTTATTTTCAATTGCCCAGCAATGAA...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGACCAAATTTACCACTaGAGTGATCTACTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHDQIYH*SDLLGH
Trigger: GTGGCCAAGTAGATCACTCAAGTGGTAAATTTGGTC...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCATCTCAGACTTTCCTaGTGGGAGGTGAATTTTCCT +
Preference number: 5 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHHLRLS*WEVNFP
Trigger: AGGAAAATTCACCTCCCACAAGGAAAGTCTGAGATG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACAGGCAAGCACAAAATTaGAGACAATGCTCACCAACC +
Preference number: 5 (lower is better)
Translates to: APHCRYVPMGAAHAWESDRQAQN*RQCSPT
Trigger: GGTTGGTGAGCATTGTCTCAAATTTTGTGCTTGCCT...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCCATTGTATTCTCTGCTaGGTGAGTTGTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RLETDPVPAHSSGSRRTAHCILC*VSCCCC
Trigger: ACAACAGCAACAACTCACCAAGCAGAGAATACAATG...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAGTTAGATGCTTGCCTTaGCGGCGTGGAAGGACGAGC +
Preference number: 5 (lower is better)
Translates to: SFFQVESETLGCSCFGRRVRCLP*RRGRTS
Trigger: GCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAAC...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCTGACAACACTGCGGTaGTTGGAGATGGACCGTAGG +
Preference number: 5 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLLTTLR*LEMDRR
Trigger: CCTACGGTCCATCTCCAACAACCGCAGTGTTGTCAG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAGGCAGTGGGCCTCACTaGAAAGACAGGTACACACCC +
Preference number: 5 (lower is better)
Translates to: SFFQVESETLGCSCFGRRGSGPH*KDRYTP
Trigger: GGGTGTGTACCTGTCTTTCAAGTGAGGCCCACTGCC...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGTCGGGTGCAGCTGCTTaGGAAGGAGACCAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQSGAAA*EGDQPP
Trigger: GGGCGGCTGGTCTCCTTCCAAAGCAGCTGCACCCGA...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATGCCACTCATTCTCAGTaGTTTGGGGCTTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: GTESSRVSICLWSHRATHATHSQ*FGASTS
Trigger: TGACGTGGAAGCCCCAAACAACTGAGAATGAGTGGC...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGCCTGGGGGCACCAACTaGCAAAGTAGGGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLPGGTN*QSRVIL
Trigger: CAAGATCACCCTACTTTGCAAGTTGGTGCCCCCAGG...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAATTTCCTGGGAAACATaGGCCAGTCTTGACAAGCCC +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPISWET*ASLDKP
Trigger: GGGCTTGTCAAGACTGGCCAATGTTTCCCAGGAAAT...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATCGATTGGCCACCTCATaGTACATTACAGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHRLATS*YITEYL
Trigger: AAGATACTCTGTAATGTACAATGAGGTGGCCAATCG...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCTCACTTTTGGGGAAGTaGTACAGGATATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: ARAALPLCPNGRCTCLGISLLGK*YRIFSD
Trigger: ATCAGAGAATATCCTGTACAACTTCCCCAAAAGTGA...GATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS TCA 90 bp GGGCAAAGTGAAGGCAGCGGCTGGGTCCTCACAAGCACAACTTGGTaGCTGCCCGAATCTGGGTCCATTGGGATGAAAGAAGGCATAATA +
Preference number: 5 (lower is better)
Translates to: GQSEGSGWVLTSTTW*LPESGSIGMKEGII
Trigger: TATTATGCCTTCTTTCATCCCAATGGACCCAGATTCGGGCAGTCACCAAGTTGTGCTTGTGAGGACCCAGCCGCTGCCTTCACTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTGACAACACTGCGGTaGTTGGAGATGGACCGTAGG +
Preference number: 5 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLALTTLR*LEMDRR
Trigger: CCTACGGTCCATCTCCAACAACCGCAGTGTTGTCAG...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAACCCTTCATCTGGATGTaGTGGGTCCTGCAACTCCTT +
Preference number: 5 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEPFIWM*WVLQLL
Trigger: AAGGAGTTGCAGGACCCACAACATCCAGATGAAGGG...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGACCGTGCAGGAGGAGTTaGGTAGCAATGGAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRPCRRS*VAMESP
Trigger: AGGACTCTCCATTGCTACCAAACTCCTCCTGCACGG...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGGTGGTTGGATGGTGTTaGGCACTAGAAAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLVVGWC*ALERSG
Trigger: GCCACTCCTTTCTAGTGCCAAACACCATCCAACCAC...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATACATTGTGTCAGAACTaGTTTCCAATCAACGGCATT +
Preference number: 5 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHTLCQN*FPINGI
Trigger: AATGCCGTTGATTGGAAACAAGTTCTGACACAATGT...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACAAAAATGACATTGGATaGCCGAGACAAAGGAACGTT +
Preference number: 5 (lower is better)
Translates to: APHCRYVPMGAAHAWESDKNDIG*PRQRNV
Trigger: AACGTTCCTTTGTCTCGGCAATCCAATGTCATTTTT...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATCCATCCTTGGCCATTTaGAAACACTGGAGCATCAGG +
Preference number: 5 (lower is better)
Translates to: GTESSRVSICLWSHRATHPSLAI*KHWSIR
Trigger: CCTGATGCTCCAGTGTTTCAAAATGGCCAAGGATGG...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGTGAGAGCAGGCTGCTaGCATGTTAGACTAATTGCT +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPVRAGC*HVRLIA
Trigger: AGCAATTAGTCTAACATGCAAGCAGCCTGCTCTCAC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CGTCTGGAAACAGATCCGGTTCCAGCCCATTCCTCTGGCTCGCGCCGCACTGCCAATTACCTGTTCTTTTaGGATCTCAGTTGTCTCATC +
Preference number: 5 (lower is better)
Translates to: RLETDPVPAHSSGSRRTANYLFF*DLSCLI
Trigger: GATGAGACAACTGAGATCCAAAAAGAACAGGTAATT...GGCAGTGCGGCGCGAGCCAGAGGAATGGGCTGGAACCGGATCTGTTTCCAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAACTTTCCTTTTGTGCTaGACTGTGCATTGCCTAGCC +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPTFLLC*TVHCLA
Trigger: GGCTAGGCAATGCACAGTCAAGCACAAAAGGAAAGT...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CCATTCCTCTGGCTCGCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATTTTTCATCAGGATATTaGCAGTCATGTGGACAGTCT +
Preference number: 5 (lower is better)
Translates to: PFLWLAPHCRYVPMGAAHFSSGY*QSCGQS
Trigger: AGACTGTCCACATGACTGCAAATATCCTGATGAAAA...ATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGCGAGCCAGAGGAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAACGTGTCCTGCCTTCCTaGACATTGAACCAACTGAAG +
Preference number: 5 (lower is better)
Translates to: QRHSFRWSQRLSGAAALERVLPS*TLNQLK
Trigger: CTTCAGTTGGTTCAATGTCAAGGAAGGCAGGACACG...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTACAACACTGCGGTTGTaGGAGATGGACCGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFTTLRL*EMDRRV
Trigger: CACCCTACGGTCCATCTCCAACAACCGCAGTGTTGT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAAGCTCCTTGGTCTTGTaGAAAGCCGTACATGGGCTG +
Preference number: 5 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRSSLVL*KAVHGL
Trigger: CAGCCCATGTACGGCTTTCAACAAGACCAAGGAGCT...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACTCATTCTCAGTTGTTaGGGGCTTCCACGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: SFFQVESETLGCSCFGRRLILSC*GLPRQS
Trigger: GGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACGAGAACTGGACTACTTaGTGTGAATTAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: APHCRYVPMGAAHAWESDENWTT*CELDPN
Trigger: ATTTGGATCTAATTCACACAAAGTAGTCCAGTTCTC...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GCGCCGCACTGCCGTTATGTCCCAATGGGCGCTGCACATGCCTGGGAATCAGACTTTTCAAAAATGACATaGGATTGCCGAGACAAAGGA +
Preference number: 5 (lower is better)
Translates to: APHCRYVPMGAAHAWESDFSKMT*DCRDKG
Trigger: TCCTTTGTCTCGGCAATCCAATGTCATTTTTGAAAA...GTCTGATTCCCAGGCATGTGCAGCGCCCATTGGGACATAACGGCAGTGCGGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACGGAATCGCCCATCCTaGGCCATTTTGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: SFFQVESETLGCSCFGRRRNRPS*AILKHW
Trigger: CCAGTGTTTCAAAATGGCCAAGGATGGGCGATTCCG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCAGTGCAACTTTCCTTTaGTGCTTGACTGTGCATTGC +
Preference number: 5 (lower is better)
Translates to: VARSLPESASAYGHTEPLSATFL*CLTVHC
Trigger: GCAATGCACAGTCAAGCACAAAAGGAAAGTTGCACT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGACTGGTTGGGGGAGTATaGATACTAGGAAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SFFQVESETLGCSCFGRRLVGGV*ILGSGQ
Trigger: CTGCCCACTTCCTAGTATCAATACTCCCCCAACCAG...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATGAAACCTCTGGCTCATaGGTTGCTGTCTTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: GTESSRVSICLWSHRATHETSGS*VAVFVL
Trigger: CAGAACAAAGACAGCAACCAATGAGCCAGAGGTTTC...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGGCAGTGGGCCTCACTaGAAAGACAGGTACACACCC +
Preference number: 5 (lower is better)
Translates to: RKSLYTVENLIARSLACFGSGPH*KDRYTP
Trigger: GGGTGTGTACCTGTCTTTCAAGTGAGGCCCACTGCC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAGTCCTGCAACTCCTTTaGCTTTATAAAGTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPVLQLL*LYKVVS
Trigger: CGAAACCACTTTATAAAGCAAAAGGAGTTGCAGGAC...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGTGGTTGGATGGTGTTaGGCACTAGAAAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFVVGWC*ALERSG
Trigger: GCCACTCCTTTCTAGTGCCAAACACCATCCAACCAC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCTCATTCTCAGTTGTTaGGGGCTTCCACGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICLILSC*GLPRQS
Trigger: GGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCGCCACTCATTCTCAGTaGTTTGGGGCTTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCATHSQ*FGASTS
Trigger: TGACGTGGAAGCCCCAAACAACTGAGAATGAGTGGC...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGATACACAGTGGAGAACTaGATTGCTCGTTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: SFFQVESETLGCSCFGRRYTVEN*IARSLA
Trigger: GGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTA...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCAATTTCCTGGGAAACATaGGCCAGTCTTGACAAGCCC +
Preference number: 5 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAISWET*ASLDKP
Trigger: GGGCTTGTCAAGACTGGCCAATGTTTCCCAGGAAAT...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGATCCCAGAAGTCGCAGTaGTTGAAAGCTGTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRSQKSQ*LKAVLN
Trigger: GTTGAGCACAGCTTTCAACAACTGCGACTTCTGGGA...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCCCTCTAGACTGCTTATaGACAAATCTGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: VARSLPESASAYGHTEPLPLDCL*TNLMTS
Trigger: GGAAGTCATCAGATTTGTCAATAAGCAGTCTAGAGG...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAAGGAAGAATCAGAGCTaGAGGGCTATCAATGGTCCA +
Preference number: 5 (lower is better)
Translates to: QRHSFRWSQRLSGAAALERKNQS*RAINGP
Trigger: TGGACCATTGATAGCCCTCAAGCTCTGATTCTTCCT...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCAGTAACCAGTTGGTGCTaGGAAATTGGCATGACATCA +
Preference number: 5 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSVTSWC*EIGMTS
Trigger: TGATGTCATGCCAATTTCCAAGCACCAACTGGTTAC...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGTGAGTTGTTGCTGTaGTATTCCTCAGACTCCACT +
Preference number: 5 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEGELLL*YSSDST
Trigger: AGTGGAGTCTGAGGAATACAACAGCAACAACTCACC...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCGTGTCCTGCCTTCCTaGACATTGAACCAACTGAAG +
Preference number: 5 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICRVLPS*TLNQLK
Trigger: CTTCAGTTGGTTCAATGTCAAGGAAGGCAGGACACG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCCTCACAAGCACAACTaGGTGACTGCCCGAATCTGG +
Preference number: 5 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQPHKHN*VTARIW
Trigger: CCAGATTCGGGCAGTCACCAAGTTGTGCTTGTGAGG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATAATCAGACTCTCATTTaGCCTTTTTCCCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: GTESSRVSICLWSHRATHNQTLI*PFSPLP
Trigger: AGGAAGTGGGGAAAAAGGCAAAATGAGAGTCTGATT...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTTGTCGAGGCTGTAGATaGAGAGTCTTGCCACATGCC +
Preference number: 5 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVCRGCR*RVLPHA
Trigger: GGCATGTGGCAAGACTCTCAATCTACAGCCTCGACA...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCATCCTCTCTCTCTATCTaGTCAAAATGCCAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPSSLSI*SKCQSK
Trigger: CTTACTTTGGCATTTTGACAAGATAGAGAGAGAGGA...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCACTCACGGTGAATCATTaGTATCATGTTCTGCAACAT +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPLTVNH*YHVLQH
Trigger: ATGTTGCAGAACATGATACAAATGATTCACCGTGAG...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTGTCATTTCAAAGGGTaGTCCAGCTCTAACACACTT +
Preference number: 5 (lower is better)
Translates to: GTESSRVSICLWSHRATHCHFKG*SSSNTL
Trigger: AAGTGTGTTAGAGCTGGACAACCCTTTGAAATGACA...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCTGGGAGACACTCCTTTaGATCAAAAGAGAATTTCCA +
Preference number: 5 (lower is better)
Translates to: VARSLPESASAYGHTEPLWETLL*IKREFP
Trigger: TGGAAATTCTCTTTTGATCAAAAGGAGTGTCTCCCA...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGAATGACCACCCCAGTCCTCCTGTGTTTTCACCATGCGCTTCAACCATCCTCTTACAACCTCCTGAGGTaGGGTGGTGTATATCATGTA +
Preference number: 5 (lower is better)
Translates to: GMTTPVLLCFHHALQPSSYNLLR*GGVYHV
Trigger: TACATGATATACACCACCCAACCTCAGGAGGTTGTA...AGAGGATGGTTGAAGCGCATGGTGAAAACACAGGAGGACTGGGGTGGTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS CCA 90 bp TCATTATGGCCACAGCCCTGCTGTCACCCCTTCATCTGGATGTTGTaGGTCCTGCAACTCCTTTTGCTTTATAAAGTGGTTTCGTACTCC +
Preference number: 5 (lower is better)
Translates to: SLWPQPCCHPFIWML*VLQLLLLYKVVSYS
Trigger: GGAGTACGAAACCACTTTATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGAAATATCTCCAGATTaGCCCGAGCTGCAAGATGTG +
Preference number: 5 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFEISPD*PELQDV
Trigger: CACATCTTGCAGCTCGGGCAAATCTGGAGATATTTC...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCATATCACTTCAAAGACTaGTTAAATCTCCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPYHFKD*LNLLPS
Trigger: GGAAGGAAGGAGATTTAACAAGTCTTTGAAGTGATA...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAATACAACTCTGTCATCTaGCAGACCTTCAGACATGCT +
Preference number: 5 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREYNSVI*QTFRHA
Trigger: AGCATGTCTGAAGGTCTGCAAGATGACAGAGTTGTA...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGAACCAAGGTGATAGCTTaGGGAGGAGAAACATCTTCA +
Preference number: 5 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRTKVIA*GGETSS
Trigger: TGAAGATGTTTCTCCTCCCAAAGCTATCACCTTGGT...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAAGGAGAATTTTATTTCAGGGCTaGCGCCAAGAGCTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: SFFQVESETLGCSCFGRRILFQG*RQELVL
Trigger: CAGAACTAGCTCTTGGCGCAAGCCCTGAAATAAAAT...TCTCCTTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACCTATATTCCCACGATaGGCCACCTCATTGTACATT +
Preference number: 5 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAPIFPR*ATSLYI
Trigger: AATGTACAATGAGGTGGCCAATCGTGGGAATATAGG...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GTGGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCAATGGTCCAGTGGTTTaGTCTATGTTGAAAAATTGC +
Preference number: 5 (lower is better)
Translates to: VARSLPESASAYGHTEPLNGPVV*SMLKNC
Trigger: GCAATTTTTCAACATAGACAAAACCACTGGACCATT...GAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCTCTTCACCTGATATTCTGATAGCACCCCTGGCCAGGTTCCTGGGGGCACCAAATTCAGCGTGCTATTaGGTTTCAAAGAGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LSSPDILIAPLARFLGAPNSACY*VSKREE
Trigger: TTCTTCTCTCTTTGAAACCAAATAGCACGCTGAATT...TGGTGCCCCCAGGAACCTGGCCAGGGGTGCTATCAGAATATCAGGTGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS CCA 90 bp GATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCATCTaGATGTTGTGGGTCCTGCAACTCCTTTTGCTTTATAAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: DEVSLWPQPCCHPFI*MLWVLQLLLLYKVV
Trigger: AACCACTTTATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CAGCGTCATTCTTTCAGGTGGAGTCAGAGACTCTCGGGTGCAGCTGCTTTGGAACAAAGTAGGGTGATCTaGCAAGAGACAAATGTTTTC +
Preference number: 5 (lower is better)
Translates to: QRHSFRWSQRLSGAAALEQSRVI*QETNVF
Trigger: GAAAACATTTGTCTCTTGCAAGATCACCCTACTTTG...TTCCAAAGCAGCTGCACCCGAGAGTCTCTGACTCCACCTGAAAGAATGACGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCAATGCAAATGGCTATTaGGCACTTCTTCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCNANGY*ALLPCG
Trigger: GCCACATGGAAGAAGTGCCAAATAGCCATTTGCATT...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTCTAGCTGTGGGACCTTaGGGCAAATTGCTTGACATC +
Preference number: 5 (lower is better)
Translates to: RKSLYTVENLIARSLACFLAVGP*GKLLDI
Trigger: GATGTCAAGCAATTTGCCCAAAGGTCCCACAGCTAG...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCACTAGACTGATTAATGTTCCCTaGCAGGAGCTTGGTTACAAT +
Preference number: 5 (lower is better)
Translates to: SCLGLPRQSCGWMVFGTRLINVP*QELGYN
Trigger: ATTGTAACCAAGCTCCTGCAAGGGAACATTAATCAG...TCTAGTGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTGAAAGCTGTGCTCAACCCTCAGCCCCACTGTTTCCTAGCTGTGGGACCTTTGTCTTCATCACCATACTaGGGCCTCTACATTAATAGA +
Preference number: 5 (lower is better)
Translates to: LKAVLNPQPHCFLAVGPLSSSPY*GLYINR
Trigger: TCTATTAATGTAGAGGCCCAAGTATGGTGATGAAGA...CAAAGGTCCCACAGCTAGGAAACAGTGGGGCTGAGGGTTGAGCACAGCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGCCCAGTTTAGTGTGTTaGGACACAGAGGCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQPSLVC*DTEALV
Trigger: CACAAGAGCCTCTGTGTCCAAACACACTAAACTGGG...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTTCTCTGCTTGGTGAGTaGTTGCTGTTGTATTCCTCA +
Preference number: 5 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFSLLGE*LLLYSS
Trigger: TGAGGAATACAACAGCAACAACTCACCAAGCAGAGA...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGCACGGAGTCTTCCAGAGTCAGCATCTGCCTATGGTCACACAGAGCCACTCATTGTCTTTTCATCTGTTaGGTGAAGAATCTAGACTCT +
Preference number: 5 (lower is better)
Translates to: GTESSRVSICLWSHRATHCLFIC*VKNLDS
Trigger: AGAGTCTAGATTCTTCACCAAACAGATGAAAAGACA...ATGAGTGGCTCTGTGTGACCATAGGCAGATGCTGACTCTGGAAGACTCCGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCACTCTCCCTAGGCTATaGAGCTGTCTGGCTACAGAG +
Preference number: 5 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRTLPRL*SCLATE
Trigger: CTCTGTAGCCAGACAGCTCAATAGCCTAGGGAGAGT...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CCCTGCTCTAGGATGAAGTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCATGGGAAAAATGTAATTaGCATATCCTTCATCGACTC +
Preference number: 5 (lower is better)
Translates to: PCSRMKCHYGHSPAVTPSWEKCN*HILHRL
Trigger: GAGTCGATGAAGGATATGCAAATTACATTTTTCCCA...TGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACACTTCATCCTAGAGCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS TCA 90 bp CAACTCCTTTTGCTTTATAAAGTGGTTTCGTACTCCAACCGCTCCTaGATAAGGGCATCATCTTTGTACTGCAGCCTTGGAGGAGATGGG +
Preference number: 5 (lower is better)
Translates to: QLLLLYKVVSYSNRS*IRASSLYCSLGGDG
Trigger: CCCATCTCCTCCAAGGCTGCAGTACAAAGATGATGCCCTTATTCAGGAGCGGTTGGAGTACGAAACCACTTTATAAAGCAAAAGGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCCTATATTCCCACGATTGGCCACCTCATTGTACATTACAGAGTATCTTTGTACCTCACAAGCACAACTaGGTGACTGCCCGAATCTGG +
Preference number: 5 (lower is better)
Translates to: LLYSHDWPPHCTLQSIFVPHKHN*VTARIW
Trigger: CCAGATTCGGGCAGTCACCAAGTTGTGCTTGTGAGG...TACAAAGATACTCTGTAATGTACAATGAGGTGGCCAATCGTGGGAATATAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCAAGTTATTGAGCTCCTaGGTCTTGTTGAAAGCCGTA +
Preference number: 5 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCKLLSS*VLLKAV
Trigger: TACGGCTTTCAACAAGACCAAGGAGCTCAATAACTT...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTGGCATACATCATGAAGTTATaGAGCTCCTTGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: FSVVWGFHVSPVVGWCLAYIMKL*SSLVLL
Trigger: CAACAAGACCAAGGAGCTCAATAACTTCATGATGTA...TGCCAAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp TGTCACGCAGCACAGTGCTGCTCTTCTGGGCATTGGAGGAAAGGCTTTAGAGAAGGATATTCTCTGATGTaGTTTTCACACTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: CHAAQCCSSGHWRKGFREGYSLM*FSHCVL
Trigger: AAGGACACAGTGTGAAAACAACATCAGAGAATATCC...TTCTCTAAAGCCTTTCCTCCAATGCCCAGAAGAGCAGCACTGTGCTGCGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGGTTGAGCCCTCTGTTACTTCCTGTGGATGTCATCGTGGGGACACAGTCTCTGCCAGAAGAGATTATATaGAGTGCGTATCTTATGTCA +
Preference number: 5 (lower is better)
Translates to: RLSPLLLPVDVIVGTQSLPEEII*SAYLMS
Trigger: TGACATAAGATACGCACTCAATATAATCTCTTCTGG...CAGAGACTGTGTCCCCACGATGACATCCACAGGAAGTAACAGAGGGCTCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCACAATCTCTTCCCATTaGGTGATACAGAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICTISSH*VIQNSV
Trigger: GACAGAATTCTGTATCACCAAATGGGAAGAGATTGT...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTTGGGTTTGCTGTCCGTaGGATAGGATTTTCACACAT +
Preference number: 5 (lower is better)
Translates to: RKSLYTVENLIARSLACFWVCCP*DRIFTH
Trigger: ATGTGTGAAAATCCTATCCAACGGACAGCAAACCCA...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCTACATCATGAAGTTATaGAGCTCCTTGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCYIMKL*SSLVLL
Trigger: CAACAAGACCAAGGAGCTCAATAACTTCATGATGTA...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTAAACATTGGCCAGTCTaGACAAGCCCTTTCTATTTA +
Preference number: 5 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFKHWPV*TSPFYL
Trigger: TAAATAGAAAGGGCTTGTCAAGACTGGCCAATGTTT...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCATTCTCAGTTGTTTGGGGCTTCCACGTCAGTCCTGTGGTTGGATGGTGTTTCTTTGGGCAAATTGCTaGACATCTCTAAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: LILSCLGLPRQSCGWMVFLWANC*TSLSHL
Trigger: TAAATGGCTTAGAGATGTCAAGCAATTTGCCCAAAG...AAACACCATCCAACCACAGGACTGACGTGGAAGCCCCAAACAACTGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCACAGGAATGGCATTTTaGCACAATCAGAATGTCATG +
Preference number: 5 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICTGMAF*HNQNVM
Trigger: CATGACATTCTGATTGTGCAAAAATGCCATTCCTGT...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGGTCCTGCAACTCCTTTaGCTTTATAAAGTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQVLQLL*LYKVVS
Trigger: CGAAACCACTTTATAAAGCAAAAGGAGTTGCAGGAC...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp GTTTTCCCACTTTCGTCAGGCCCTAGCCTTTCCAAAGTGGACATGTCTGTTGTTCAAAGTAGGGTGATCTaGCAAGAGACAAATGTTTTC +
Preference number: 5 (lower is better)
Translates to: VFPLSSGPSLSKVDMSVVQSRVI*QETNVF
Trigger: GAAAACATTTGTCTCTTGCAAGATCACCCTACTTTG...AACAACAGACATGTCCACTTTGGAAAGGCTAGGGCCTGACGAAAGTGGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTGCACAAGAGAAAATTTaGTGTCAGTACTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: RKSLYTVENLIARSLACFAQEKI*CQYCAG
Trigger: ACCAGCACAGTACTGACACAAAATTTTCTCTTGTGC...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCGAATATGACCAGCAATaGCTTACGGCGCAAGAAAGT +
Preference number: 5 (lower is better)
Translates to: LLKAVHGLHRISVKKDVREYDQQ*LTAQES
Trigger: ACTTTCTTGCGCCGTAAGCAATTGCTGGTCATATTC...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GGATCAAATGATAATGGTGATGACGGTCCCACTAGGAACTTCACGGCTCACTGCATACTTCAGTCTGGTTaGGCAGCACAAACTTTAAAA +
Preference number: 5 (lower is better)
Translates to: GSNDNGDDGPTRNFTAHCILQSG*AAQTLK
Trigger: TTTTAAAGTTTGTGCTGCCAAACCAGACTGAAGTAT...GCAGTGAGCCGTGAAGTTCCTAGTGGGACCGTCATCACCATTATCATTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TGGAGCCATAGGAGGGGGACAGTTGCCTGGAATGGAAGAATAGCATTTATCTGCCACACCATTTCTGCATaGAAGCTATCATGTAAAATG +
Preference number: 5 (lower is better)
Translates to: WSHRRGTVAWNGRIAFICHTISA*KLSCKM
Trigger: CATTTTACATGATAGCTTCAATGCAGAAATGGTGTG...GCAGATAAATGCTATTCTTCCATTCCAGGCAACTGTCCCCCTCCTATGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGGGGAGCAGGTTTATATaGTGCAATGGTTTCATGCTA +
Preference number: 5 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQGSRFI*CNGFML
Trigger: TAGCATGAAACCATTGCACAATATAAACCTGCTCCC...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGACAGAAGAGGTTCTCTTaGCTCAATTCAATCTGTTCA +
Preference number: 5 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRQKRFS*LNSICS
Trigger: TGAACAGATTGAATTGAGCAAAGAGAACCTCTTCTG...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AATCTTTCCCCAGTAGTGGATTTCAGAACGCCACCTGGTGATCATGAGTACAGAGAAAACTTGTCACTTTaGGGGAAGTTGTACAGGATA +
Preference number: 5 (lower is better)
Translates to: NLSPVVDFRTPPGDHEYRENLSL*GKLYRI
Trigger: TATCCTGTACAACTTCCCCAAAAGTGACAAGTTTTC...TCTGTACTCATGATCACCAGGTGGCGTTCTGAAATCCACTACTGGGGAAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCACAATCTCTTCCCATTaGGTGATACAGAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRTISSH*VIQNSV
Trigger: GACAGAATTCTGTATCACCAAATGGGAAGAGATTGT...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTACACAGTGGAGAACTaGATTGCTCGTTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSYTVEN*IARSLA
Trigger: GGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCAAACATTGGCCAGTCTaGACAAGCCCTTTCTATTTA +
Preference number: 5 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRKHWPV*TSPFYL
Trigger: TAAATAGAAAGGGCTTGTCAAGACTGGCCAATGTTT...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS-3UTR CAA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTAAAAGAAGTCCTAGGTaGAGCCCTCTGTTACTTCCT +
Preference number: 5 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIKRSPR*SPLLLP
Trigger: AGGAAGTAACAGAGGGCTCAACCTAGGACTTCTTTT...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTACAAAAGCTTTACATTaGGGGGCCAGGTCACTGCCT +
Preference number: 5 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSTKALH*GARSLP
Trigger: AGGCAGTGACCTGGCCCCCAAATGTAAAGCTTTTGT...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp GAGAACAGAAAGCGGGGAACGTTTACTTGCTGTACGGAGGTATTTAAAACCCAGGACTCGCTAAGGAACTaGAATTATTCTGTACTCATA +
Preference number: 5 (lower is better)
Translates to: ENRKRGTFTCCTEVFKTQDSLRN*NYSVLI
Trigger: TATGAGTACAGAATAATTCAAGTTCCTTAGCGAGTC...CTGGGTTTTAAATACCTCCGTACAGCAAGTAAACGTTCCCCGCTTTCTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp TTGTTGAAAGCCGTACATGGGCTGCATAGGATTTCTGTCAAAAAGGATGTTCGCGTTGTCACGTCTTTGTaGCTGATTCAACTAAACATC +
Preference number: 5 (lower is better)
Translates to: LLKAVHGLHRISVKKDVRVVTSL*LIQLNI
Trigger: GATGTTTAGTTGAATCAGCAACAAAGACGTGACAAC...GCGAACATCCTTTTTGACAGAAATCCTATGCAGCCCATGTACGGCTTTCAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGGAAAAGTCTGTACACAGTGGAGAACTTGATTGCTCGTTCTCTCGCCTGCTTTACATGTTGTCTCTACTaGTCTTTTCATCTGTTTGGT +
Preference number: 5 (lower is better)
Translates to: RKSLYTVENLIARSLACFTCCLY*SFHLFG
Trigger: ACCAAACAGATGAAAAGACAAGTAGAGACAACATGT...AAAGCAGGCGAGAGAACGAGCAATCAAGTTCTCCACTGTGTACAGACTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTGAAATATCTCCAGATTaGCCCGAGCTGCAAGATGTG +
Preference number: 5 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSEISPD*PELQDV
Trigger: CACATCTTGCAGCTCGGGCAAATCTGGAGATATTTC...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTAAGTTATTGAGCTCCTaGGTCTTGTTGAAAGCCGTA +
Preference number: 5 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIKLLSS*VLLKAV
Trigger: TACGGCTTTCAACAAGACCAAGGAGCTCAATAACTT...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AAGGAATGTGGTAATGGTGGCATGAACCTAGAGATCATGGTACCTTGTAACATTTTCCCTTGCAGGAGCTaGGTTACAATATTACAAGTC +
Preference number: 5 (lower is better)
Translates to: KECGNGGMNLEIMVPCNIFPCRS*VTILQV
Trigger: GACTTGTAATATTGTAACCAAGCTCCTGCAAGGGAA...AATGTTACAAGGTACCATGATCTCTAGGTTCATGCCACCATTACCACATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp AGCTTACTAGGCAACAATATCATTGAATGGGTTACAACTCTGTCATCTTGCAGAGTTTGTGGTAACCAGTaGGTGCTTGGAAATTGGCAT +
Preference number: 5 (lower is better)
Translates to: SLLGNNIIEWVTTLSSCRVCGNQ*VLGNWH
Trigger: ATGCCAATTTCCAAGCACCAACTGGTTACCACAAAC...TCTGCAAGATGACAGAGTTGTAACCCATTCAATGATATTGTTGCCTAGTAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTGGGTTTGCTGTCCGTaGGATAGGATTTTCACACAT +
Preference number: 5 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSWVCCP*DRIFTH
Trigger: ATGTGTGAAAATCCTATCCAACGGACAGCAAACCCA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTTCTGCATTATTTCTCTaGGCACAACAAAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSSALFL*AQQRDF
Trigger: AAAGTCTCTTTGTTGTGCCAAGAGAAATAATGCAGA...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS-3UTR CAA 90 bp CTCCTTTCTTCCAGTGATGAGATGTATAGCTTATATCTCAAGTACATGTTGTCTAAAAATCCTTGCCATTaGGGAGCAGGTTTATATTGT +
Preference number: 5 (lower is better)
Translates to: LLSSSDEMYSLYLKYMLSKNPCH*GAGLYC
Trigger: ACAATATAAACCTGCTCCCAAATGGCAAGGATTTTT...AGACAACATGTACTTGAGATATAAGCTATACATCTCATCACTGGAAGAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS GCA 72 bp AGGAGCAGCAGCGGCCGCCGCGGCGCTCCTCGGACCTaGACATTCCTCTCCTCCCCTCGCGCGCGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: RSSSGRRGAPRT*TFLSSPRARSL
Trigger: GAGGGAGCGCGCGCGAGGGGAGGAGAGGAATGTGCAGGTCCGAGGAGCGCCGCGGCGGCCGCTGCTGCTCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327381.7
CDS TCA 72 bp GGCCACGGCGGCCAGGATCCAGAGGCAGTCCCACAGTaGGTAGCGCCGCTGCTCCCTGCCCAGGCGCAGGCA +
Preference number: 6 (lower is better)
Translates to: GHGGQDPEAVPQ*VAPLLPAQAQA
Trigger: TGCCTGCGCCTGGGCAGGGAGCAGCGGCGCTACTCACTGTGGGACTGCCTCTGGATCCTGGCCGCCGTGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp GCTCCCGACCCCGACGGCAAGCCTGGAGCCAATCCCTaGACCGAGCCCGAGTGGTCCGAGTTCTGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: APDPDGKPGANP*TEPEWSEFCSG
Trigger: CCCGCTGCAGAACTCGGACCACTCGGGCTCGGTGCAGGGATTGGCTCCAGGCTTGCCGTCGGGGTCGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp CTTCCCCGGCTGCAGACCCACCGCCGACCACCGTCTTaGAATCGGCTCCAGGCTGCGGGCAGCTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: LPRLQTHRRPPS*NRLQAAGSWRQ
Trigger: CTGCCTCCAGCTGCCCGCAGCCTGGAGCCGATTGCAAGACGGTGGTCGGCGGTGGGTCTGCAGCCGGGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CCA 72 bp CTCCTCGTCCTCGGCTCCCGACCCCGACGGCAAGCCTaGAGCCAATCCCTGCACCGAGCCCGAGTGGTCCGA +
Preference number: 6 (lower is better)
Translates to: LLVLGSRPRRQA*SQSLHRARVVR
Trigger: TCGGACCACTCGGGCTCGGTGCAGGGATTGGCTCCAGGCTTGCCGTCGGGGTCGGGAGCCGAGGACGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp CCTTCCCCGGCTGCAGACCCACCGCCGACCACCGTCTaGCAATCGGCTCCAGGCTGCGGGCAGCTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PSPAADPPPTTV*QSAPGCGQLEA
Trigger: TGCCTCCAGCTGCCCGCAGCCTGGAGCCGATTGCAAGACGGTGGTCGGCGGTGGGTCTGCAGCCGGGGAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp CGCGCAGGTAGTAGTCCACGGCGAGCCAGACGTCTGTaGCCACGTCCGCGAAGTACACGGCCACGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: RAGSSPRRARRL*PRPRSTRPRRP
Trigger: TGGCCGCCGTGGCCGTGTACTTCGCGGACGTGGGCACAGACGTCTGGCTCGCCGTGGACTACTACCTGCGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp TTGCGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGCTaGAGACCCACCGCCGACCACCGTCTTGCAATCGGC +
Preference number: 6 (lower is better)
Translates to: LRRGRTSLAFPG*RPTADHRLAIG
Trigger: GCCGATTGCAAGACGGTGGTCGGCGGTGGGTCTGCAGCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CCA 72 bp GGCAAGCCTGGAGCCAATCCCTGCACCGAGCCCGAGTaGTCCGAGTTCTGCAGCGGGGTGAACGCCACGTCG +
Preference number: 6 (lower is better)
Translates to: GKPGANPCTEPE*SEFCSGVNATS
Trigger: CGACGTGGCGTTCACCCCGCTGCAGAACTCGGACCACTCGGGCTCGGTGCAGGGATTGGCTCCAGGCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp CTGTGCTTGCCACTGGCCCGGGTAGCCCCGCTGCTGTaGCTGCCGCTGTTGGCCGCGGCGATGTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LCLPLARVAPLL*LPLLAAAMLLL
Trigger: CAAGAGCAACATCGCCGCGGCCAACAGCGGCAGCAACAGCAGCGGGGCTACCCGGGCCAGTGGCAAGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 90 bp GCCGCTGTTGGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATGCTaGCCTTTGCGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: AAVGRGDVALAGVRC*PLRRGRTSLAFPGC
Trigger: GCAGCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAACAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 90 bp GACGCAGACCTGTGCTTGCCACTGGCCCGGGTAGCCCCGCTGCTGTaGCTGCCGCTGTTGGCCGCGGCGATGTTGCTCTTGCTGGCGTTA +
Preference number: 6 (lower is better)
Translates to: DADLCLPLARVAPLL*LPLLAAAMLLLLAL
Trigger: TAACGCCAGCAAGAGCAACATCGCCGCGGCCAACAGCGGCAGCAACAGCAGCGGGGCTACCCGGGCCAGTGGCAAGCACAGGTCTGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp GCACCGACAGAGAGCCGAGCACCACGAAGAAGAGCGTaGGCCCGAACCACCAGCGCTGGCCGCGCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: APTESRAPRRRA*ARTTSAGRAGS
Trigger: ACTACCTGCGCGGCCAGCGCTGGTGGTTCGGGCTCACGCTCTTCTTCGTGGTGCTCGGCTCTCTGTCGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp CTGGCCCGGGTAGCCCCGCTGCTGTTGCTGCCGCTGTaGGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGAT +
Preference number: 6 (lower is better)
Translates to: LARVAPLLLLPL*AAAMLLLLALD
Trigger: ATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAACAGCGGCAGCAACAGCAGCGGGGCTACCCGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 90 bp GTTGGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATGCTTGCCTTaGCGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGCTGCAGACCC +
Preference number: 6 (lower is better)
Translates to: VGRGDVALAGVRCLP*RRGRTSLAFPGCRP
Trigger: GGGTCTGCAGCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp AGGAGCCAGATGCAGAAGGAGCAGGACGCAGACCTGTaGTTGCCACTGGCCCGGGTAGCCCCGCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: RSQMQKEQDADL*LPLARVAPLLL
Trigger: CAACAGCAGCGGGGCTACCCGGGCCAGTGGCAAGCACAGGTCTGCGTCCTGCTCCTTCTGCATCTGGCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp GCCAATCCCTGCACCGAGCCCGAGTGGTCCGAGTTCTaGAGCGGGGTGAACGCCACGTCGCTGCTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: ANPCTEPEWSEF*SGVNATSLLFF
Trigger: GAAGAAAAGCAGCGACGTGGCGTTCACCCCGCTGCAGAACTCGGACCACTCGGGCTCGGTGCAGGGATTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp GCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATGCTTaGCTTTGCGGCGTGGAAGGACGAGCCTCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: AAAMLLLLALDA*LCGVEGRASPS
Trigger: GGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp GTTGGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATaGTTGCCTTTGCGGCGTGGAAGGACGAGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: VGRGDVALAGVR*LPLRRGRTSLA
Trigger: GGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp GGCGATGTTGCTCTTGCTGGCGTTAGATGCTTGCCTTaGCGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: GDVALAGVRCLP*RRGRTSLAFPG
Trigger: GCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp GGCCGCGGCGATGTTGCTCTTGCTGGCGTTAGATGCTaGCCTTTGCGGCGTGGAAGGACGAGCCTCGCCTTC +
Preference number: 6 (lower is better)
Translates to: GRGDVALAGVRC*PLRRGRTSLAF
Trigger: GAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp CCGCTGCTGTTGCTGCCGCTGTTGGCCGCGGCGATGTaGCTCTTGCTGGCGTTAGATGCTTGCCTTTGCGGC +
Preference number: 6 (lower is better)
Translates to: PLLLLPLLAAAM*LLLALDACLCG
Trigger: GCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGCCGCGGCCAACAGCGGCAGCAACAGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp GCGATGTTGCTCTTGCTGGCGTTAGATGCTTGCCTTTaGGGCGTGGAAGGACGAGCCTCGCCTTCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: AMLLLLALDACL*GVEGRASPSPA
Trigger: AGCCGGGGAAGGCGAGGCTCGTCCTTCCACGCCGCAAAGGCAAGCATCTAACGCCAGCAAGAGCAACATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp ACCGTAGGGTGCTTGTGGCCACGTCTGGGGGCAAAGTaGAGGCAGCGGCTGGGTCCTCACAAGCACAACTTG +
Preference number: 6 (lower is better)
Translates to: TVGCLWPRLGAK*RQRLGPHKHNL
Trigger: CAAGTTGTGCTTGTGAGGACCCAGCCGCTGCCTTCACTTTGCCCCCAGACGTGGCCACAAGCACCCTACGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp ACCCATCCCGCTCTGCGAATTTCTGATCGCGGTCGCTaGCAACACTGCGGTTGTTGGAGATGGACCGTAGGG +
Preference number: 6 (lower is better)
Translates to: THPALRISDRGR*QHCGCWRWTVG
Trigger: CCCTACGGTCCATCTCCAACAACCGCAGTGTTGTCAGCGACCGCGATCAGAAATTCGCAGAGCGGGATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp CGAGATGATGGGGTGGATGGGGCAGTGGGCCTCACTTaGAAGACAGGTACACACCCATCCCGCTCTGCGAAT +
Preference number: 6 (lower is better)
Translates to: RDDGVDGAVGLT*KTGTHPSRSAN
Trigger: ATTCGCAGAGCGGGATGGGTGTGTACCTGTCTTTCAAGTGAGGCCCACTGCCCCATCCACCCCATCATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp GAACACCACACACAGCGCTGGAATGGCAAATGCGTCTaGAATCTGGGGAGCCTTGTAGAGGTACCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: EHHTQRWNGKCV*NLGSLVEVPEG
Trigger: GCCCTCTGGTACCTCTACAAGGCTCCCCAGATTGCAGACGCATTTGCCATTCCAGCGCTGTGTGTGGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp GCTGCCGCTGTGAAACCTTGGAGGGCCTGTAAGCTATaGGTCTGTACGATAATGCAGAGCTGCAGGACCAGC +
Preference number: 6 (lower is better)
Translates to: AAAVKPWRACKL*VCTIMQSCRTS
Trigger: GCTGGTCCTGCAGCTCTGCATTATCGTACAGACTCATAGCTTACAGGCCCTCCAAGGTTTCACAGCGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp GAAGGCAGCGGCTGGGTCCTCACAAGCACAACTTGGTaGCTGCCCGAATCTGGGTCCATTGGGATGAAAGAA +
Preference number: 6 (lower is better)
Translates to: EGSGWVLTSTTW*LPESGSIGMKE
Trigger: TTCTTTCATCCCAATGGACCCAGATTCGGGCAGTCACCAAGTTGTGCTTGTGAGGACCCAGCCGCTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp AAGACAGGTACACACCCATCCCGCTCTGCGAATTTCTaGTCGCGGTCGCTGACAACACTGCGGTTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: KTGTHPSRSANF*SRSLTTLRLLE
Trigger: CTCCAACAACCGCAGTGTTGTCAGCGACCGCGATCAGAAATTCGCAGAGCGGGATGGGTGTGTACCTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp CTGAAATCGTGCACAAACCAGCGGAAGCTGAACACTTaGACCGACAGAGAGCCGAGCACCACGAAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LKSCTNQRKLNT*TDREPSTTKKS
Trigger: GCTCTTCTTCGTGGTGCTCGGCTCTCTGTCGGTGCAAGTGTTCAGCTTCCGCTGGTTTGTGCACGATTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp GCTGCTGAACACCACACACAGCGCTGGAATGGCAAATaGGTCTGCAATCTGGGGAGCCTTGTAGAGGTACCA +
Preference number: 6 (lower is better)
Translates to: AAEHHTQRWNGK*VCNLGSLVEVP
Trigger: TGGTACCTCTACAAGGCTCCCCAGATTGCAGACGCATTTGCCATTCCAGCGCTGTGTGTGGTGTTCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CCA 72 bp CTGATTCTTCAATCCGTGGTGGGCGAGATGATGGGGTaGATGGGGCAGTGGGCCTCACTTGAAAGACAGGTA +
Preference number: 6 (lower is better)
Translates to: LILQSVVGEMMG*MGQWASLERQV
Trigger: TACCTGTCTTTCAAGTGAGGCCCACTGCCCCATCCACCCCATCATCTCGCCCACCACGGATTGAAGAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CCA 72 bp GCTGCAGGACCAGCTGTGGAGCACTTTCCAGAAAGGTaGCTAGCAAATGCAGCATACTCACATCCGCATACT +
Preference number: 6 (lower is better)
Translates to: AAGPAVEHFPER*LANAAYSHPHT
Trigger: AGTATGCGGATGTGAGTATGCTGCATTTGCTAGCCACCTTTCTGGAAAGTGCTCCACAGCTGGTCCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp TGGCCACAGCCCTGCTGTCACCCCTTCATCTGGATGTaGTGGGTCCTGCAACTCCTTTTGCTTTATAAAGTG +
Preference number: 6 (lower is better)
Translates to: WPQPCCHPFIWM*WVLQLLLLYKV
Trigger: CACTTTATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGGGGTGACAGCAGGGCTGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CCA 72 bp TCATTATGGCCACAGCCCTGCTGTCACCCCTTCATCTaGATGTTGTGGGTCCTGCAACTCCTTTTGCTTTAT +
Preference number: 6 (lower is better)
Translates to: SLWPQPCCHPFI*MLWVLQLLLLY
Trigger: ATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 90 bp GTGTCATTATGGCCACAGCCCTGCTGTCACCCCTTCATCTGGATGTaGTGGGTCCTGCAACTCCTTTTGCTTTATAAAGTGGTTTCGTAC +
Preference number: 6 (lower is better)
Translates to: VSLWPQPCCHPFIWM*WVLQLLLLYKVVSY
Trigger: GTACGAAACCACTTTATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGGGGTGACAGCAGGGCTGTGGCCATAATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp CCCTTCATCTGGATGTTGTGGGTCCTGCAACTCCTTTaGCTTTATAAAGTGGTTTCGTACTCCAACCGCTCC +
Preference number: 6 (lower is better)
Translates to: PFIWMLWVLQLL*LYKVVSYSNRS
Trigger: GGAGCGGTTGGAGTACGAAACCACTTTATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp CCTTCATCTGGATGTTGTGGGTCCTGCAACTCCTTTTaGTTTATAAAGTGGTTTCGTACTCCAACCGCTCCT +
Preference number: 6 (lower is better)
Translates to: PSSGCCGSCNSF*FIKWFRTPTAP
Trigger: AGGAGCGGTTGGAGTACGAAACCACTTTATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp CCTGCTGTCACCCCTTCATCTGGATGTTGTGGGTCCTaGAACTCCTTTTGCTTTATAAAGTGGTTTCGTACT +
Preference number: 6 (lower is better)
Translates to: PAVTPSSGCCGS*NSFCFIKWFRT
Trigger: AGTACGAAACCACTTTATAAAGCAAAAGGAGTTGCAGGACCCACAACATCCAGATGAAGGGGTGACAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS CAA 72 bp TCTCCCCACTCTGTCGGCTTCGAATACCTAAGTATATaGTGTGGAAATATCTCCAGATTTGCCCGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: SPHSVGFEYLSI*CGNISRFARAA
Trigger: TGCAGCTCGGGCAAATCTGGAGATATTTCCACACAATATACTTAGGTATTCGAAGCCGACAGAGTGGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp AGCTGTGGAGCACTTTCCAGAAAGGTGGCTAGCAAATaGAGCATACTCACATCCGCATACTCATATACCATT +
Preference number: 6 (lower is better)
Translates to: SCGALSRKVASK*SILTSAYSYTI
Trigger: AATGGTATATGAGTATGCGGATGTGAGTATGCTGCATTTGCTAGCCACCTTTCTGGAAAGTGCTCCACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS TCA 72 bp TTGCTTTATAAAGTGGTTTCGTACTCCAACCGCTCCTaGATAAGGGCATCATCTTTGTACTGCAGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: LLYKVVSYSNRS*IRASSLYCSLG
Trigger: TCCAAGGCTGCAGTACAAAGATGATGCCCTTATTCAGGAGCGGTTGGAGTACGAAACCACTTTATAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1
CDS GCA 72 bp CTTTCGGAGGCTTCGGTCCAAAACATGTCTCTCCCATaGTGGGTACCTATTCCTGAACAAGTCAATTTTAAT +
Preference number: 6 (lower is better)
Translates to: LSEASVQNMSLP*WVPIPEQVNFN
Trigger: ATTAAAATTGACTTGTTCAGGAATAGGTACCCAGCATGGGAGAGACATGTTTTGGACCGAAGCCTCCGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327381.7
ENST00000622811.1