Pregenerated sensors for XIST (Homo sapiens)
Ensembl gene IDs: ENSG00000229807Ensembl transcript IDs: ENST00000416330.2, ENST00000417942.5, ENST00000421322.3, ENST00000429829.6, ENST00000433732.2, ENST00000434839.3, ENST00000445814.2, ENST00000602495.1, ENST00000602587.5, ENST00000602863.2, ENST00000635841.2, ENST00000647696.1, ENST00000647913.2, ENST00000648091.1, ENST00000648607.1, ENST00000648829.1, ENST00000648927.2, ENST00000648970.1, ENST00000648991.1, ENST00000649353.1, ENST00000649757.1, ENST00000650186.1, ENST00000650366.1, ENST00000650548.1, ENST00000650627.1, ENST00000650637.1, ENST00000665247.1, ENST00000666309.1, ENST00000666954.1, ENST00000669898.1
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | CTGCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTTaGCACGGCTCACCACCATGTCCACACCAAGCAGGCCTGGAGCAC | + |
Preference number: 5 (lower is better) Translates to: LPPVGQRSSVIHSGP*HGSPPCPHQAGLEH Trigger: GTGCTCCAGGCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 90 bp | TCCTCTTCTGCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTaGTCCTTGCCACGGCTCACCACCATGTCCACACCAAGCAGGCCT | + |
Preference number: 5 (lower is better) Translates to: SSSATCWPTIICDPF*SLPRLTTMSTPSRP Trigger: AGGCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGAAGAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS TCA 90 bp | AGGCAGGAATTCCTCTTCTGCCACCTGTTGGCCAACGATCATCTGTaGTCCATTCTGGTCCTTGCCACGGCTCACCACCATGTCCACACC | + |
Preference number: 5 (lower is better) Translates to: RQEFLFCHLLANDHL*SILVLATAHHHVHT Trigger: GGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGAAGAGGAATTCCTGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS GCA 90 bp | TCATCTCACATGGCAGCCTGGCATAAGGAACCGCTCCACAATGCTTaGTCTGATAGCCGACGTTCTGCACCTATCAGGCAGGGGTTAGGA | + |
Preference number: 5 (lower is better) Translates to: SSHMAAWHKEPLHNA*SDSRRSAPIRQGLG Trigger: TCCTAACCCCTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCATGTGAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS GCA 90 bp | GCCCCTCCACTTCTTTCTCCTGACTGGCTAAAGACAGCTGCGAAGTaGCATGCTAATTCACCCAGGTCTTCGCTGAGTAGCTGGACAGTG | + |
Preference number: 5 (lower is better) Translates to: APPLLSPDWLKTAAK*HANSPRSSLSSWTV Trigger: CACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCACTTCGCAGCTGTCTTTAGCCAGTCAGGAGAAAGAAGTGGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 90 bp | AAGTGTAGGTGGTTCCCCAAGGCTGGTACCAATGAGACTGGGGTTTaGGAATTAGTTGGTCATCATCCCTCCTGCTGCCCAGCAGTGGTC | + |
Preference number: 5 (lower is better) Translates to: KCRWFPKAGTNETGV*ELVGHHPSCCPAVV Trigger: GACCACTGCTGGGCAGCAGGAGGGATGATGACCAACTAATTCCCAAACCCCAGTCTCATTGGTACCAGCCTTGGGGAACCACCTACACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000416330.2 ENST00000417942.5 ENST00000429829.6 ENST00000647696.1 ENST00000648829.1 ENST00000648970.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 |
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CDS CCA 90 bp | CCACTGGGAGACATACACGTGGCCCCTCCACTTCTTTCTCCTGACTaGCTAAAGACAGCTGCGAAGTGCCATGCTAATTCACCCAGGTCT | + |
Preference number: 5 (lower is better) Translates to: PLGDIHVAPPLLSPD*LKTAAKCHANSPRS Trigger: AGACCTGGGTGAATTAGCATGGCACTTCGCAGCTGTCTTTAGCCAGTCAGGAGAAAGAAGTGGAGGGGCCACGTGTATGTCTCCCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 90 bp | TCACATGCTCAGAATGTCCTTGAAAACACCTGGTGTACCGCCCACTaGGAGACATACACGTGGCCCCTCCACTTCTTTCTCCTGACTGGC | + |
Preference number: 5 (lower is better) Translates to: SHAQNVLENTWCTAH*ETYTWPLHFFLLTG Trigger: GCCAGTCAGGAGAAAGAAGTGGAGGGGCCACGTGTATGTCTCCCAGTGGGCGGTACACCAGGTGTTTTCAAGGACATTCTGAGCATGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434839.3 |
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CDS GCA 90 bp | CAAAGCCTCGCCCATCATGATGTGGCCTTCCCGCCACTTGAACACTaGGACAGAACTGGATCCGCCATTTTGGACAACCTAACAAAGCAC | + |
Preference number: 5 (lower is better) Translates to: QSLAHHDVAFPPLEH*DRTGSAILDNLTKH Trigger: GTGCTTTGTTAGGTTGTCCAAAATGGCGGATCCAGTTCTGTCGCAGTGTTCAAGTGGCGGGAAGGCCACATCATGATGGGCGAGGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 90 bp | CTTGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTGGGTTCTaGGTCATGGGCCTCCAGATTCCGGCCGTTAGTCTTGAGATACCT | + |
Preference number: 5 (lower is better) Translates to: LGISPGLQASILPGF*VMGLQIPAVSLEIP Trigger: AGGTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS GCA 90 bp | CAGAGACTCTTCTTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTaGTCCCTGAGCTGGGCCGATCTTTTGACATCCTTCTCCGAGAAA | + |
Preference number: 5 (lower is better) Translates to: QRLFFTAVRGASRAN*SLSWADLLTSFSEK Trigger: TTTCTCGGAGAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAAGAAGAGTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000602863.2 ENST00000648607.1 ENST00000648927.2 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | AGTCTAGGGCCTTGTTTTGGTCTTGGATCATCTCACATGGCAGCCTaGCATAAGGAACCGCTCCACAATGCTTGCTCTGATAGCCGACGT | + |
Preference number: 5 (lower is better) Translates to: SLGPCFGLGSSHMAA*HKEPLHNACSDSRR Trigger: ACGTCGGCTATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCATGTGAGATGATCCAAGACCAAAACAAGGCCCTAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 90 bp | TTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTGGGTTCTGGGTCATaGGCCTCCAGATTCCGGCCGTTAGTCTTGAGATACCTTTTTCGC | + |
Preference number: 5 (lower is better) Translates to: FPQVFKLLSFLGSGS*ASRFRPLVLRYLFR Trigger: GCGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS TCA 90 bp | CAAGCCCGCCATGATGTCCACGTGACAAAAGCCATGATATACATATaGCAACGCCTGCCATATTGTCCCTGCGGCAAAACCCAACACGAA | + |
Preference number: 5 (lower is better) Translates to: QARHDVHVTKAMIYI*QRLPYCPCGKTQHE Trigger: TTCGTGTTGGGTTTTGCCGCAGGGACAATATGGCAGGCGTTGTCATATGTATATCATGGCTTTTGTCACGTGGACATCATGGCGGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 90 bp | GTCCAACAAAAGACGGGTTGTCTGCGACCCCCTGCTGAATGCAAATaGGGTTCAGAGTGCTGTCTAATCCAATGGGTAGGATTATTGGCA | + |
Preference number: 5 (lower is better) Translates to: VQQKTGCLRPPAECK*GSECCLIQWVGLLA Trigger: TGCCAATAATCCTACCCATTGGATTAGACAGCACTCTGAACCCCATTTGCATTCAGCAGGGGGTCGCAGACAACCCGTCTTTTGTTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS TCA 90 bp | CAGGTCTCACATGCTCAGAATGTCCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCAG | + |
Preference number: 5 (lower is better) Translates to: QVSHAQNVQEEPKET*LLRTHAAWYLQWDQ Trigger: CTGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGGACATTCTGAGCATGTGAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000648970.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 90 bp | TTCTGCACCTATCAGGCAGGGGTTAGGAAGCCCCTCTGCCACACATaGCACACACACACGTACACTTGCCCACATATGCAAAGAAATATT | + |
Preference number: 5 (lower is better) Translates to: FCTYQAGVRKPLCHT*HTHTYTCPHMQRNI Trigger: AATATTTCTTTGCATATGTGGGCAAGTGTACGTGTGTGTGTGTCATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS TCA 90 bp | CAGGTCTCACATGCTCAGAATGTCCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCTG | + |
Preference number: 5 (lower is better) Translates to: QVSHAQNVQEEPKET*LLRTHAAWYLQWDL Trigger: CAGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGGACATTCTGAGCATGTGAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000602863.2 ENST00000635841.2 ENST00000648927.2 |
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CDS TCA 90 bp | CAGGTCTCACATGCTCAGAATGTCCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCCT | + |
Preference number: 5 (lower is better) Translates to: QVSHAQNVQEEPKET*LLRTHAAWYLQWDP Trigger: AGGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGGACATTCTGAGCATGTGAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647696.1 ENST00000647913.2 |
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CDS CCA 90 bp | GCTGCGAAGTGCCATGCTAATTCACCCAGGTCTTCGCTGAGTAGCTaGACAGTGTGTCATCAGTCTAATTCCATCTTCTGCTCTAATTGG | + |
Preference number: 5 (lower is better) Translates to: AAKCHANSPRSSLSS*TVCHQSNSIFCSNW Trigger: CCAATTAGAGCAGAAGATGGAATTAGACTGATGACACACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCACTTCGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS TCA 90 bp | TCAAGTGCTAGAGTGCCAGGCATGTTGATCTTCAGGTGGGAAGGCTaGCTTCCTTCAGTGTGTTCAAATTTCTTGGACCTGCTGAAGACT | + |
Preference number: 5 (lower is better) Translates to: SSARVPGMLIFRWEG*LPSVCSNFLDLLKT Trigger: AGTCTTCAGCAGGTCCAAGAAATTTGAACACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCTAGCACTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 25 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000433732.2 ENST00000434839.3 ENST00000445814.2 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | TTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTGCTCCCTGAGCTaGGCCGATCTTTTGACATCCTTCTCCGAGAAACAATATTCTTTT | + |
Preference number: 5 (lower is better) Translates to: FTAVRGASRANCSLS*ADLLTSFSEKQYSF Trigger: AAAAGAATATTGTTTCTCGGAGAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000602863.2 ENST00000648607.1 ENST00000648927.2 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 90 bp | CAAGCCTATTCTTCTGAGGAAGATCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCAG | + |
Preference number: 5 (lower is better) Translates to: QAYSSEEDQEEPKET*LLRTHAAWYLQWDQ Trigger: CTGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGATCTTCCTCAGAAGAATAGGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648607.1 ENST00000648991.1 ENST00000650548.1 |
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CDS GCA 90 bp | ACTGAAGCATTAGACATAGGTATCTCCTGTCTCTACTTTCTAGCCTaGTTGGTCTCCCTAAAGTCCTCTAATGACAAGCCCTGGCAGTAC | + |
Preference number: 5 (lower is better) Translates to: TEALDIGISCLYFLA*LVSLKSSNDKPWQY Trigger: GTACTGCCAGGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTCTAATGCTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS CCA 90 bp | GCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTTGGAACATaGGCTTTCCATCTTAGTCCTCGGGTCTCAAGTCTCAAACCATCT | + |
Preference number: 5 (lower is better) Translates to: AFVGFRPEASIYLGT*AFHLSPRVSSLKPS Trigger: AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 90 bp | TCCAATGCTTATACTTTATTATGCCATGGGAAACTAAGGGTGGGGTaGGGCGCTTGCTTAACAAGGTCAGGGAGGGAGAAAACCATTGAT | + |
Preference number: 5 (lower is better) Translates to: SNAYTLLCHGKLRVG*GACLTRSGREKTID Trigger: ATCAATGGTTTTCTCCCTCCCTGACCTTGTTAAGCAAGCGCCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | AGACAAGTGCATGGAATACTCCAATGCTTATACTTTATTATGCCATaGGAAACTAAGGGTGGGGTGGGGCGCTTGCTTAACAAGGTCAGG | + |
Preference number: 5 (lower is better) Translates to: RQVHGILQCLYFIMP*ETKGGVGRLLNKVR Trigger: CCTGACCTTGTTAAGCAAGCGCCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | CCATGGCTACCTGTGATTTTACACACTGGCGCAATGCAAAAGGGTTaGGAGTATGGACCACTGTTTGATAGACAAGTGCATGGAATACTC | + |
Preference number: 5 (lower is better) Translates to: PWLPVILHTGAMQKG*EYGPLFDRQVHGIL Trigger: GAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTCCCAACCCTTTTGCATTGCGCCAGTGTGTAAAATCACAGGTAGCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | ACCCTCAGTCAGCCAGACAATGTTGTTAAGCATATGGAGTGGGGCTaGGAGGCATGGAAACAAGCCCTGAGGAAATATGGATATGAATTA | + |
Preference number: 5 (lower is better) Translates to: TLSQPDNVVKHMEWG*EAWKQALRKYGYEL Trigger: TAATTCATATCCATATTTCCTCAGGGCTTGTTTCCATGCCTCCCAGCCCCACTCCATATGCTTAACAACATTGTCTGGCTGACTGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS TCA 90 bp | ACACATTCATTCAGCTATCCTCAAGTGCTAGAGTGCCAGGCATGTTaGTCTTCAGGTGGGAAGGCTGACTTCCTTCAGTGTGTTCAAATT | + |
Preference number: 5 (lower is better) Translates to: THSFSYPQVLECQAC*SSGGKADFLQCVQI Trigger: AATTTGAACACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCTAGCACTTGAGGATAGCTGAATGAATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 25 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000433732.2 ENST00000434839.3 ENST00000445814.2 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 90 bp | GGGAGTGGAAGGGTTAGTGCACAAGATCGTGGACAAATACAATTATaGACATCAATGCACAAGAAGAGTCCTTGGGTGATCAGCCCACAT | + |
Preference number: 5 (lower is better) Translates to: GSGRVSAQDRGQIQL*TSMHKKSPWVISPH Trigger: ATGTGGGCTGATCACCCAAGGACTCTTCTTGTGCATTGATGTTCATAATTGTATTTGTCCACGATCTTGTGCACTAACCCTTCCACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS TCA 90 bp | GTAGAGGGGTTCATGTATAATGGGTGGGACCAAGGAAAGTGCAACTaGGAATTGTTTAAGTCCAAGAGAAAGGGCCTTGTCTGGTCAACA | + |
Preference number: 5 (lower is better) Translates to: VEGFMYNGWDQGKCN*ELFKSKRKGLVWST Trigger: TGTTGACCAGACAAGGCCCTTTCTCTTGGACTTAAACAATTCTCAGTTGCACTTTCCTTGGTCCCACCCATTATACATGAACCCCTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 90 bp | CACTGGAAACACAAAATAAAGGATGGCAATCCAGCTCCCTGGGTCTaGCTTGCCTTCAGTATTTTGCACAGTAAAGCAGTAACACAGGTG | + |
Preference number: 5 (lower is better) Translates to: HWKHKIKDGNPAPWV*LAFSILHSKAVTQV Trigger: CACCTGTGTTACTGCTTTACTGTGCAAAATACTGAAGGCAAGTCAGACCCAGGGAGCTGGATTGCCATCCTTTATTTTGTGTTTCCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | TTCTCAACCAAGAGAGCCATGAAGCCACACAGAAAAGGTCGGATGTaGTCTAACCCTATGAGTTATGTAAGAATTCTCCTCCACAATGCC | + |
Preference number: 5 (lower is better) Translates to: FSTKRAMKPHRKGRM*SNPMSYVRILLHNA Trigger: GGCATTGTGGAGGAGAATTCTTACATAACTCATAGGGTTAGACCACATCCGACCTTTTCTGTGTGGCTTCATGGCTCTCTTGGTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649353.1 |
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CDS TCA 90 bp | CAAAGGTGGTACAGGAACATGCTTAGAGAATTGAGTTTGTGCACATaGACATTCCAAGTGACAGTCTTGAGTAGTGGGCACTACCTGCTA | + |
Preference number: 5 (lower is better) Translates to: QRWYRNMLRELSLCT*TFQVTVLSSGHYLL Trigger: TAGCAGGTAGTGCCCACTACTCAAGACTGTCACTTGGAATGTTCATGTGCACAAACTCAATTCTCTAAGCATGTTCCTGTACCACCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS GCA 90 bp | CTCCTAACAAGCCCCAAATCAATTCATTCAGATAGGTTTAGCTCATaGAATGCACATGACTTCCTCTGCCTGACCTGCTATCATCCATCT | + |
Preference number: 5 (lower is better) Translates to: LLTSPKSIHSDRFSS*NAHDFLCLTCYHPS Trigger: AGATGGATGATAGCAGGTCAGGCAGAGGAAGTCATGTGCATTGCATGAGCTAAACCTATCTGAATGAATTGATTTGGGGCTTGTTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650637.1 |
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CDS GCA 90 bp | TCCAAGGGAAGGGGCTCTAAGAATGAGTCAGTCCCACTGCTGTTATaGAAAGATGTTTGCAAAGGCCATAGTGTAACTAACAGAACTATG | + |
Preference number: 5 (lower is better) Translates to: SKGRGSKNESVPLLL*KDVCKGHSVTNRTM Trigger: CATAGTTCTGTTAGTTACACTATGGCCTTTGCAAACATCTTTGCATAACAGCAGTGGGACTGACTCATTCTTAGAGCCCCTTCCCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS GCA 90 bp | TTGATAGACAAGTGCATGGAATACTCCAATGCTTATACTTTATTATaGCATGGGAAACTAAGGGTGGGGTGGGGCGCTTGCTTAACAAGG | + |
Preference number: 5 (lower is better) Translates to: LIDKCMEYSNAYTLL*HGKLRVGWGACLTR Trigger: CCTTGTTAAGCAAGCGCCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS GCA 90 bp | GAGTATGGACCACTGTTTGATAGACAAGTGCATGGAATACTCCAATaGTTATACTTTATTATGCCATGGGAAACTAAGGGTGGGGTGGGG | + |
Preference number: 5 (lower is better) Translates to: EYGPLFDRQVHGILQ*LYFIMPWETKGGVG Trigger: CCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | CTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTTGACGTGTGGTGGTTGTTTT | + |
Preference number: 5 (lower is better) Translates to: LKTQLSALLVGSIMI*QIGTMKSLTCGGCF Trigger: AAAACAACCACCACACGTCAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | ATGGGACAATCAGTACTGTGTTTATTAATAACACAGAAGGGGCTTTaGGTAGTCAGCATACTCAGAAGCAATGCGAAAGGAAGTAGAGGG | + |
Preference number: 5 (lower is better) Translates to: MGQSVLCLLITQKGL*VVSILRSNAKGSRG Trigger: CCCTCTACTTCCTTTCGCATTGCTTCTGAGTATGCTGACTACCCAAAGCCCCTTCTGTGTTATTAATAAACACAGTACTGATTGTCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 90 bp | ACAGTGTGTCATCAGTCTAATTCCATCTTCTGCTCTAATTGGCTGTaGTCAATTCCACCCCCATTTCTAATTGGTTGGGTTATGCAGCAA | + |
Preference number: 5 (lower is better) Translates to: TVCHQSNSIFCSNWL*SIPPPFLIGWVMQQ Trigger: TTGCTGCATAACCCAACCAATTAGAAATGGGGGTGGAATTGATCACAGCCAATTAGAGCAGAAGATGGAATTAGACTGATGACACACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS GCA 90 bp | AACAATATACAAAGGGGACAACAAGAGATTCTTAACCAGGCAATCTaGTCTGGAAAGAAGAATGCAGAGAAAGTGCCAACCTTCCTTCCT | + |
Preference number: 5 (lower is better) Translates to: NNIQRGQQEILNQAI*SGKKNAEKVPTFLP Trigger: AGGAAGGAAGGTTGGCACTTTCTCTGCATTCTTCTTTCCAGAGCAGATTGCCTGGTTAAGAATCTCTTGTTGTCCCCTTTGTATATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | AATGGTCATCCTGTTGCTGAAAATACTTCAAGATTCAAGGTGGTGTaGCAACTGCTACTACTGCTTAGAGGTGCAATTGTCTTGACTGTT | + |
Preference number: 5 (lower is better) Translates to: NGHPVAENTSRFKVV*QLLLLLRGAIVLTV Trigger: AACAGTCAAGACAATTGCACCTCTAAGCAGTAGTAGCAGTTGCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGGATGACCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS CCA 90 bp | TCAGCAGGCCAGCTATGTCTTAAATACATGAGCTCCAACTTGAGTTaGATTTTTGAAGGAAACCTGTGTAAAATGCTACTTGCCTACAGC | + |
Preference number: 5 (lower is better) Translates to: SAGQLCLKYMSSNLS*IFEGNLCKMLLAYS Trigger: GCTGTAGGCAAGTAGCATTTTACACAGGTTTCCTTCAAAAATCCAACTCAAGTTGGAGCTCATGTATTTAAGACATAGCTGGCCTGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000647696.1 ENST00000647913.2 |
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CDS TCA 90 bp | TGTATTATACACCATGGCATCCCAAGCCATCCTGAAGTATGTAAATaGTTGGCAAAGTTCTTCTGTAAGGCTTTAAGAGAGACTTTGGGG | + |
Preference number: 5 (lower is better) Translates to: CIIHHGIPSHPEVCK*LAKFFCKALRETLG Trigger: CCCCAAAGTCTCTCTTAAAGCCTTACAGAAGAACTTTGCCAATCATTTACATACTTCAGGATGGCTTGGGATGCCATGGTGTATAATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648927.2 |
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CDS GCA 90 bp | TTCAGTGTGTTCAAATTTCTTGGACCTGCTGAAGACTCAGCTCTCTaGACTGCTTGTAGGAAGTATAATGATTTGGCAGATAGGAACAAT | + |
Preference number: 5 (lower is better) Translates to: FSVFKFLGPAEDSAL*TACRKYNDLADRNN Trigger: ATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGCAGGTCCAAGAAATTTGAACACACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 25 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000433732.2 ENST00000434839.3 ENST00000445814.2 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS GCA 90 bp | ATCACTAATTTGCCAACCTTCGCAAATAGCCAAACACAATGGCTATaGTCTATCCCTTTCATCTCTTTCCATGGCTCCAAAAGAGGTAAA | + |
Preference number: 5 (lower is better) Translates to: ITNLPTFANSQTQWL*SIPFISFHGSKRGK Trigger: TTTACCTCTTTTGGAGCCATGGAAAGAGATGAAAGGGATAGAGCATAGCCATTGTGTTTGGCTATTTGCGAAGGTTGGCAAATTAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS CCA 90 bp | AAAAATTTTCCATCTCCTCAATCAGGCCAGGAAGCATGTATCTTCTaGACAGGACTTTATCTCTCTACTCAGCTTAGTACACTGCCTTAT | + |
Preference number: 5 (lower is better) Translates to: KNFPSPQSGQEACIF*TGLYLSTQLSTLPY Trigger: ATAAGGCAGTGTACTAAGCTGAGTAGAGAGATAAAGTCCTGTCCAGAAGATACATGCTTCCTGGCCTGATTGAGGAGATGGAAAATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS CCA 90 bp | CTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCAAATATCACTTGATGAGTCAC | + |
Preference number: 5 (lower is better) Translates to: LKTQLSALLVGSIMI*QIGTMKSKYHLMSH Trigger: GTGACTCATCAAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433732.2 |
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CDS CCA 90 bp | TTAGCAATCACTAATTTGCCAACCTTCGCAAATAGCCAAACACAATaGCTATGCTCTATCCCTTTCATCTCTTTCCATGGCTCCAAAAGA | + |
Preference number: 5 (lower is better) Translates to: LAITNLPTFANSQTQ*LCSIPFISFHGSKR Trigger: TCTTTTGGAGCCATGGAAAGAGATGAAAGGGATAGAGCATAGCCATTGTGTTTGGCTATTTGCGAAGGTTGGCAAATTAGTGATTGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS TCA 90 bp | AATGTAATTGCACATATTAACAGTCCAAAACAACAGGACTTTGGTTaGTCAGGACACCCTGTTGTACTACAAAGGAAAGGTGATGGGGTA | + |
Preference number: 5 (lower is better) Translates to: NVIAHINSPKQQDFG*SGHPVVLQRKGDGV Trigger: TACCCCATCACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTGGACTGTTAATATGTGCAATTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS TCA 90 bp | TTTAAACAATCAAACCAAAGATGTTCTTCTATCTTCAGCTGTCAGTaGTCTAATGCCCTCATCTCTCTTATCCTCAGGACCCAGAATGGT | + |
Preference number: 5 (lower is better) Translates to: FKQSNQRCSSIFSCQ*SNALISLILRTQNG Trigger: ACCATTCTGGGTCCTGAGGATAAGAGAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAAGAACATCTTTGGTTTGATTGTTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS GCA 90 bp | CAATGCAAAAGGGTTGGGAGTATGGACCACTGTTTGATAGACAAGTaGATGGAATACTCCAATGCTTATACTTTATTATGCCATGGGAAA | + |
Preference number: 5 (lower is better) Translates to: QCKRVGSMDHCLIDK*MEYSNAYTLLCHGK Trigger: TTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTCCCAACCCTTTTGCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 90 bp | GTGAGGACAAAGGATTTTGTCCTCATCTCAACAATGATCAGCTATTaGAACTGCATGAAACTGAACAATTTAAACCTGGAGCTGGTAATG | + |
Preference number: 5 (lower is better) Translates to: VRTKDFVLISTMISY*NCMKLNNLNLELVM Trigger: CATTACCAGCTCCAGGTTTAAATTGTTCAGTTTCATGCAGTTCCAATAGCTGATCATTGTTGAGATGAGGACAAAATCCTTTGTCCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650366.1 |
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CDS CCA 90 bp | GAGTTCAACCATATTTTTACCCTTTTCTTCATGTGGATTGAAGAGTaGACATTTACAGTTGTGCGGAGCTGTTATATTCTGGCTACCAAC | + |
Preference number: 5 (lower is better) Translates to: EFNHIFTLFFMWIEE*TFTVVRSCYILATN Trigger: GTTGGTAGCCAGAATATAACAGCTCCGCACAACTGTAAATGTCCACTCTTCAATCCACATGAAGAAAAGGGTAAAAATATGGTTGAACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649353.1 |
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CDS CCA 90 bp | CTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTCTCACTTGTTGTATTATACA | + |
Preference number: 5 (lower is better) Translates to: LKTQLSALLVGSIMI*QIGTMKSSHLLYYT Trigger: TGTATAATACAACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648091.1 ENST00000648927.2 |
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CDS CCA 90 bp | GCATTTTATTCTCCAGTCTTTATTACTGAGCGATCCTCTACAATGTaGGTTGTTAATACCCTTGTGTTCTCAGCACAAAATATAGTAGGG | + |
Preference number: 5 (lower is better) Translates to: AFYSPVFITERSSTM*VVNTLVFSAQNIVG Trigger: CCCTACTATATTTTGTGCTGAGAACACAAGGGTATTAACAACCCACATTGTAGAGGATCGCTCAGTAATAAAGACTGGAGAATAAAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649353.1 |
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CDS GCA 90 bp | CTCTCTTATCCTCAGGACCCAGAATGGTATATTCCACATAAAAGATaGTTTGTTTATCAAATGAATCAAAAAGCACGCCTGAGGCATTTA | + |
Preference number: 5 (lower is better) Translates to: LSYPQDPEWYIPHKR*FVYQMNQKARLRHL Trigger: TAAATGCCTCAGGCGTGCTTTTTGATTCATTTGATAAACAAAGCATCTTTTATGTGGAATATACCATTCTGGGTCCTGAGGATAAGAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS CCA 90 bp | CAACTAGTGGTTGAGTTCAACCATATTTTTACCCTTTTCTTCATGTaGATTGAAGAGTGGACATTTACAGTTGTGCGGAGCTGTTATATT | + |
Preference number: 5 (lower is better) Translates to: QLVVEFNHIFTLFFM*IEEWTFTVVRSCYI Trigger: AATATAACAGCTCCGCACAACTGTAAATGTCCACTCTTCAATCCACATGAAGAAAAGGGTAAAAATATGGTTGAACTCAACCACTAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649353.1 |
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CDS TCA 90 bp | ATGTTTGTGCCCCCAGTTGTTATCTCTAAGGATAAGAGTAATCAATaGTCATTCAGCAGATATAGCTTATATATGGGTGGCAGTTTACAA | + |
Preference number: 5 (lower is better) Translates to: MFVPPVVISKDKSNQ*SFSRYSLYMGGSLQ Trigger: TTGTAAACTGCCACCCATATATAAGCTATATCTGCTGAATGATCATTGATTACTCTTATCCTTAGAGATAACAACTGGGGGCACAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS GCA 90 bp | ACAAAGGATTTTGTCCTCATCTCAACAATGATCAGCTATTGGAACTaGATGAAACTGAACAATTTAAACCTGGAGCTGGTAATGTTCTTA | + |
Preference number: 5 (lower is better) Translates to: TKDFVLISTMISYWN*MKLNNLNLELVMFL Trigger: TAAGAACATTACCAGCTCCAGGTTTAAATTGTTCAGTTTCATGCAGTTCCAATAGCTGATCATTGTTGAGATGAGGACAAAATCCTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650366.1 |
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CDS TCA 90 bp | TTCAAGAGTCTTCCATTTATCTTAGCTTTTGGAATAAATTATCTTTaGGGTAGAAGGACAATGACGAAGCCACTTAATTCCTTGTGTCTG | + |
Preference number: 5 (lower is better) Translates to: FKSLPFILAFGINYL*GRRTMTKPLNSLCL Trigger: CAGACACAAGGAATTAAGTGGCTTCGTCATTGTCCTTCTACCTCAAAGATAATTTATTCCAAAAGCTAAGATAAATGGAAGACTCTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000416330.2 ENST00000417942.5 ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648829.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000666954.1 ENST00000669898.1 |
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CDS TCA 90 bp | GTAATTAATATCCCTTGCTGTAAAACAAGGAGGATAAAATGGATCTaGTCTGAAAGACATTGTTGTGATCAGTTGCCATGGTTCACATTA | + |
Preference number: 5 (lower is better) Translates to: VINIPCCKTRRIKWI*SERHCCDQLPWFTL Trigger: TAATGTGAACCATGGCAACTGATCACAACAATGTCTTTCAGATCAGATCCATTTTATCCTCCTTGTTTTACAGCAAGGGATATTAATTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CAA 90 bp | TCTGCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTaGCCACGGCTCACCACCATGTCCACACCAAGCAGGCCTGGAGCA | + |
Preference number: 6 (lower is better) Translates to: SATCWPTIICDPFWS*PRLTTMSTPSRPGA Trigger: TGCTCCAGGCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS GCA 72 bp | GTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTTaGCACGGCTCACCACCATGTCCACACCAAGCAGGC | + |
Preference number: 6 (lower is better) Translates to: VGQRSSVIHSGP*HGSPPCPHQAG Trigger: GCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 72 bp | GCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTaGTCCTTGCCACGGCTCACCACCATGTCCACACCA | + |
Preference number: 6 (lower is better) Translates to: ATCWPTIICDPF*SLPRLTTMSTP Trigger: TGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 72 bp | TGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTaGGTTCTGGGTCATGGGCCTCCAGATTCCGGCCGT | + |
Preference number: 6 (lower is better) Translates to: WDFPRSSSFYPS*VLGHGPPDSGR Trigger: ACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 72 bp | GTCCGAGGAGCTAGTAGGGCAAACTGCTCCCTGAGCTaGGCCGATCTTTTGACATCCCCAGCATTAGCCAAG | + |
Preference number: 6 (lower is better) Translates to: VRGASRANCSLS*ADLLTSPALAK Trigger: CTTGGCTAATGCTGGGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000648970.1 ENST00000650637.1 |
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CDS GCA 72 bp | ATGGCAGCCTGGCATAAGGAACCGCTCCACAATGCTTaGTCTGATAGCCGACGTTCTGCACCTATCAGGCAG | + |
Preference number: 6 (lower is better) Translates to: MAAWHKEPLHNA*SDSRRSAPIRQ Trigger: CTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 72 bp | AAAGCCTCGCCCATCATGATGTGGCCTTCCCGCCACTaGAACACTGCGACAGAACTGGATCCGCCATTTTGG | + |
Preference number: 6 (lower is better) Translates to: KASPIMMWPSRH*NTATELDPPFW Trigger: CCAAAATGGCGGATCCAGTTCTGTCGCAGTGTTCAAGTGGCGGGAAGGCCACATCATGATGGGCGAGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CAA 72 bp | TGTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTaGCCACGGCTCACCACCATGTCCACACCAAGCAGG | + |
Preference number: 6 (lower is better) Translates to: CWPTIICDPFWS*PRLTTMSTPSR Trigger: CCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CAA 90 bp | TGGGACCAGGAAAGTATCTTGACAGAACCTCCTGACCTAGGGTTGTaGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGGATCCTCATGCCC | + |
Preference number: 6 (lower is better) Translates to: WDQESILTEPPDLGL*PSGSELFPWRILMP Trigger: GGGCATGAGGATCCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTGGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 72 bp | TTCCTCTTCTGCCACCTGTTGGCCAACGATCATCTGTaGTCCATTCTGGTCCTTGCCACGGCTCACCACCAT | + |
Preference number: 6 (lower is better) Translates to: FLFCHLLANDHL*SILVLATAHHH Trigger: ATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGAAGAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000635841.2 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS TCA 72 bp | GTTGGCACAGTCCACCAAATTATTTGGCCACTACTATaGGCAGGGAGTTCAGGCTGTCCCCTTGGGACCTCG | + |
Preference number: 6 (lower is better) Translates to: VGTVHQIIWPLL*AGSSGCPLGTS Trigger: CGAGGTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGGCCAAATAATTTGGTGGACTGTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000429829.6 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS GCA 72 bp | GCCCATCATGATGTGGCCTTCCCGCCACTTGAACACTaGGACAGAACTGGATCCGCCATTTTGGACAACCTA | + |
Preference number: 6 (lower is better) Translates to: AHHDVAFPPLEH*DRTGSAILDNL Trigger: TAGGTTGTCCAAAATGGCGGATCCAGTTCTGTCGCAGTGTTCAAGTGGCGGGAAGGCCACATCATGATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS GCA 72 bp | TTCTTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTaGTCCCTGAGCTGGGCCGATCTTTTGACATCCCCA | + |
Preference number: 6 (lower is better) Translates to: FFTAVRGASRAN*SLSWADLLTSP Trigger: TGGGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000648970.1 ENST00000650637.1 |
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CDS CCA 72 bp | GTCCGAGGAGCTAGTAGGGCAAACTGCTCCCTGAGCTaGGCCGATCTTTTGACATCCTTCTCCGAGAAACAA | + |
Preference number: 6 (lower is better) Translates to: VRGASRANCSLS*ADLLTSFSEKQ Trigger: TTGTTTCTCGGAGAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000602863.2 ENST00000648607.1 ENST00000648927.2 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 72 bp | TGGTTCCCCAAGGCTGGTACCAATGAGACTGGGGTTTaGGAATTAGTTGGTCATCATCCCTCCTGCTGCCCA | + |
Preference number: 6 (lower is better) Translates to: WFPKAGTNETGV*ELVGHHPSCCP Trigger: TGGGCAGCAGGAGGGATGATGACCAACTAATTCCCAAACCCCAGTCTCATTGGTACCAGCCTTGGGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000416330.2 ENST00000417942.5 ENST00000429829.6 ENST00000647696.1 ENST00000648829.1 ENST00000648970.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 |
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CDS CCA 72 bp | CAGAATGTCCTTGAAAACACCTGGTGTACCGCCCACTaGGAGACATACACGTGGCCCCTCCACTTCTTTCTC | + |
Preference number: 6 (lower is better) Translates to: QNVLENTWCTAH*ETYTWPLHFFL Trigger: GAGAAAGAAGTGGAGGGGCCACGTGTATGTCTCCCAGTGGGCGGTACACCAGGTGTTTTCAAGGACATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434839.3 |
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CDS GCA 72 bp | TTCTTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTaGTCCCTGAGCTGGGCCGATCTTTTGACATCCTTC | + |
Preference number: 6 (lower is better) Translates to: FFTAVRGASRAN*SLSWADLLTSF Trigger: GAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000602863.2 ENST00000648607.1 ENST00000648927.2 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 72 bp | ACTAGCCCTAAGCCGAGTTATGCGGCAAGTCTAAAATaGCGGCCACTTTTCCTCCACAATCTGAACACGCCC | + |
Preference number: 6 (lower is better) Translates to: TSPKPSYAASLK*RPLFLHNLNTP Trigger: GGGCGTGTTCAGATTGTGGAGGAAAAGTGGCCGCCATTTTAGACTTGCCGCATAACTCGGCTTAGGGCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650637.1 |
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CDS CCA 72 bp | GTCTTCAAGCTTCTATCCTTCCTGGGTTCTGGGTCATaGGCCTCCAGATTCCGGCCGTTAGTCTTGAGATAC | + |
Preference number: 6 (lower is better) Translates to: VFKLLSFLGSGS*ASRFRPLVLRY Trigger: GTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 72 bp | CAGGAAAGTATCTTGACAGAACCTCCTGACCTAGGGTaGTTGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGG | + |
Preference number: 6 (lower is better) Translates to: QESILTEPPDLG*LPSGSELFPWR Trigger: CCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 72 bp | TCTGGGTCATGGGCCTCCAGATTCCGGCCGTTAGTCTaGAGATACCTTTTTCGCTTGGGTCCTCTATCCATC | + |
Preference number: 6 (lower is better) Translates to: SGSWASRFRPLV*RYLFRLGPLSI Trigger: GATGGATAGAGGACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 90 bp | ATCTGGGACCAGGAAAGTATCTTGACAGAACCTCCTGACCTAGGGTaGTTGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGGATCCTCATG | + |
Preference number: 6 (lower is better) Translates to: IWDQESILTEPPDLG*LPSGSELFPWRILM Trigger: CATGAGGATCCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTGGTCCCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 90 bp | ATCCAACTCAGGCCTTCGGTCCAATTCAGGCCACCCTCTGTTTTCTaGGCTCTTGAGGCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATC | + |
Preference number: 6 (lower is better) Translates to: IQLRPSVQFRPPSVF*ALEAFVGFRPEASI Trigger: GATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 90 bp | CTTCCATGTGTCCTGTCCCAGGTCTTAAGACTTCTAACTCAAGCCTaGAGACTTCCATCCAACTCAGGCCTTCGGTCCAATTCAGGCCAC | + |
Preference number: 6 (lower is better) Translates to: LPCVLSQVLRLLTQA*RLPSNSGLRSNSGH Trigger: GTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 72 bp | GACATACACGTGGCCCCTCCACTTCTTTCTCCTGACTaGCTAAAGACAGCTGCGAAGTGCCATGCTAATTCA | + |
Preference number: 6 (lower is better) Translates to: DIHVAPPLLSPD*LKTAAKCHANS Trigger: TGAATTAGCATGGCACTTCGCAGCTGTCTTTAGCCAGTCAGGAGAAAGAAGTGGAGGGGCCACGTGTATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 72 bp | TCCCCCTTTGGTAGCTCTAGCACCCAGCATGGTATCTaGCACATTATAGGTGACCACAACAAGCTTAGTCCC | + |
Preference number: 6 (lower is better) Translates to: SPFGSSSTQHGI*HIIGDHNKLSP Trigger: GGGACTAAGCTTGTTGTGGTCACCTATAATGTGCCAGATACCATGCTGGGTGCTAGAGCTACCAAAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS CAA 72 bp | GAAAGTATCTTGACAGAACCTCCTGACCTAGGGTTGTaGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGGATC | + |
Preference number: 6 (lower is better) Translates to: ESILTEPPDLGL*PSGSELFPWRI Trigger: GATCCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 90 bp | CGGTCCAATTCAGGCCACCCTCTGTTTTCTTGGCTCTTGAGGCTTTaGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTTGGAACATGGG | + |
Preference number: 6 (lower is better) Translates to: RSNSGHPLFSWLLRL*LVSGLRLLSILEHG Trigger: CCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGGACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 90 bp | TCAGGCCTTCGGTCCAATTCAGGCCACCCTCTGTTTTCTTGGCTCTaGAGGCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTTG | + |
Preference number: 6 (lower is better) Translates to: SGLRSNSGHPLFSWL*RLLLVSGLRLLSIL Trigger: CAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGGACCGAAGGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS TCA 72 bp | TTCAGCTATCCTCAAGTGCTAGAGTGCCAGGCATGTTaGTCTTCAGGTGGGAAGGCTGACTTCCTTCAGTGT | + |
Preference number: 6 (lower is better) Translates to: FSYPQVLECQAC*SSGGKADFLQC Trigger: ACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCTAGCACTTGAGGATAGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 25 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000433732.2 ENST00000434839.3 ENST00000445814.2 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 72 bp | CTGCGAAGTGCCATGCTAATTCACCCAGGTCTTCGCTaGGTAGCTGGACAGTGTGTCATCAGTCTAATTCCA | + |
Preference number: 6 (lower is better) Translates to: LRSAMLIHPGLR*VAGQCVISLIP Trigger: TGGAATTAGACTGATGACACACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCACTTCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CCA 72 bp | CCTTGTTTTGGTCTTGGATCATCTCACATGGCAGCCTaGCATAAGGAACCGCTCCACAATGCTTGCTCTGAT | + |
Preference number: 6 (lower is better) Translates to: PCFGLGSSHMAA*HKEPLHNACSD Trigger: ATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCATGTGAGATGATCCAAGACCAAAACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 72 bp | GGTTTCAGGCCTGAGGCTTCTATCTATCTTGGAACATaGGCTTTCCATCTTAGTCCTCGGGTCTCAAGTCTC | + |
Preference number: 6 (lower is better) Translates to: GFRPEASIYLGT*AFHLSPRVSSL Trigger: GAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 72 bp | CAGCCAGACAATGTTGTTAAGCATATGGAGTGGGGCTaGGAGGCATGGAAACAAGCCCTGAGGAAATATGGA | + |
Preference number: 6 (lower is better) Translates to: QPDNVVKHMEWG*EAWKQALRKYG Trigger: TCCATATTTCCTCAGGGCTTGTTTCCATGCCTCCCAGCCCCACTCCATATGCTTAACAACATTGTCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS CAA 72 bp | GTCCTGTCCCAGGTCTTAAGACTTCTAACTCAAGCCTaGAGACTTCCATCCAACTCAGGCCTTCGGTCCAAT | + |
Preference number: 6 (lower is better) Translates to: VLSQVLRLLTQA*RLPSNSGLRSN Trigger: ATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGACCTGGGACAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 72 bp | CAGCTACAACCCTGGGCTAATCTTAGGTCGTTGGCCTaGTGTCACAAGTCTCAGTTCTTAGGCCTTCCATGT | + |
Preference number: 6 (lower is better) Translates to: QLQPWANLRSLA*CHKSQFLGLPC Trigger: ACATGGAAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACGACCTAAGATTAGCCCAGGGTTGTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000416330.2 ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 72 bp | GTCTTCCAGCTACAACCCTGGGCTAATCTTAGGTCGTaGGCCTTGTGTCACAAGTCTCAGTTCTTAGGCCTT | + |
Preference number: 6 (lower is better) Translates to: VFQLQPWANLRS*ALCHKSQFLGL Trigger: AAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACGACCTAAGATTAGCCCAGGGTTGTAGCTGGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000416330.2 ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS TCA 72 bp | AGAGTGCCAGGCATGTTGATCTTCAGGTGGGAAGGCTaGCTTCCTTCAGTGTGTTCAAATTTCTTGGACCTG | + |
Preference number: 6 (lower is better) Translates to: RVPGMLIFRWEG*LPSVCSNFLDL Trigger: CAGGTCCAAGAAATTTGAACACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 25 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000433732.2 ENST00000434839.3 ENST00000445814.2 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 72 bp | ATAAGAGGGGACAGAGGTGGAAAGGCTAAATGTCCTTaGAAAGACCTTGAAAACACCTGGTGTACCGCCCAC | + |
Preference number: 6 (lower is better) Translates to: IRGDRGGKAKCP*KDLENTWCTAH Trigger: GTGGGCGGTACACCAGGTGTTTTCAAGGTCTTTTCAAGGACATTTAGCCTTTCCACCTCTGTCCCCTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS TCA 72 bp | ATGCAGCGTGGTATCTTCAATGGGATCTGGACCCTCTaGCTTTTCTATAGGTGGCATCCCAGCATTAGCCAA | + |
Preference number: 6 (lower is better) Translates to: MQRGIFNGIWTL*LFYRWHPSISQ Trigger: TTGGCTAATGCTGGGATGCCACCTATAGAAAAGTCAGAGGGTCCAGATCCCATTGAAGATACCACGCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635841.2 |
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CDS CCA 72 bp | TGCCATGCTAATTCACCCAGGTCTTCGCTGAGTAGCTaGACAGTGTGTCATCAGTCTAATTCCATCTTCTGC | + |
Preference number: 6 (lower is better) Translates to: CHANSPRSSLSS*TVCHQSNSIFC Trigger: GCAGAAGATGGAATTAGACTGATGACACACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CAA 72 bp | CTACTTGAGTTCTGGGTTTTACTGCAGTCTAGGGCCTaGTTTTGGTCTTGGATCATCTCACATGGCAGCCTG | + |
Preference number: 6 (lower is better) Translates to: LLEFWVLLQSRA*FWSWIISHGSL Trigger: CAGGCTGCCATGTGAGATGATCCAAGACCAAAACAAGGCCCTAGACTGCAGTAAAACCCAGAACTCAAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 72 bp | TTGGCTGTGATCAATTCCACCCCCATTTCTAATTGGTaGGGTTATGCAGCAATCCAGCACTGTCCATCCCAC | + |
Preference number: 6 (lower is better) Translates to: LAVINSTPISNW*GYAAIQHCPSH Trigger: GTGGGATGGACAGTGCTGGATTGCTGCATAACCCAACCAATTAGAAATGGGGGTGGAATTGATCACAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS CAA 72 bp | GACATAGGTATCTCCTGTCTCTACTTTCTAGCCTGCTaGGTCTCCCTAAAGTCCTCTAATGACAAGCCCTGG | + |
Preference number: 6 (lower is better) Translates to: DIGISCLYFLAC*VSLKSSNDKPW Trigger: CCAGGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS CAA 90 bp | CTCTTGAGGCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTaGGAACATGGGCTTTCCATCTTAGTCCTCGGGTCTCAAGTCTCA | + |
Preference number: 6 (lower is better) Translates to: LLRLLLVSGLRLLSI*EHGLSILVLGSQVS Trigger: TGAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 90 bp | GAAGCATTAGACATAGGTATCTCCTGTCTCTACTTTCTAGCCTGCTaGGTCTCCCTAAAGTCCTCTAATGACAAGCCCTGGCAGTACACG | + |
Preference number: 6 (lower is better) Translates to: EALDIGISCLYFLAC*VSLKSSNDKPWQYT Trigger: CGTGTACTGCCAGGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTCTAATGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS TCA 72 bp | CATGATGTCCACGTGACAAAAGCCATGATATACATATaGCAACGCCTGCCATATTGTCCCTGCGGCAAAACC | + |
Preference number: 6 (lower is better) Translates to: HDVHVTKAMIYI*QRLPYCPCGKT Trigger: GGTTTTGCCGCAGGGACAATATGGCAGGCGTTGTCATATGTATATCATGGCTTTTGTCACGTGGACATCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS TCA 72 bp | AAACCCGCCATCTTTAACAATGCGGCAAGCCCGCCATaGTGTCCACGTGACAAAAGCCATGATATACATATG | + |
Preference number: 6 (lower is better) Translates to: KPAIFNNAASPP*CPRDKSHDIHM Trigger: CATATGTATATCATGGCTTTTGTCACGTGGACATCATGGCGGGCTTGCCGCATTGTTAAAGATGGCGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS GCA 72 bp | TTCCACCTTCTGCCCTACTTGAGTTCTGGGTTTTACTaGAGTCTAGGGCCTTGTTTTGGTCTTGGATCATCT | + |
Preference number: 6 (lower is better) Translates to: FHLLPYLSSGFY*SLGPCFGLGSS Trigger: AGATGATCCAAGACCAAAACAAGGCCCTAGACTGCAGTAAAACCCAGAACTCAAGTAGGGCAGAAGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 72 bp | TGCCAGAAACTTGTAAATGCACTTCAAAACCAATTGTaGCTCAAGTGTAGGTGGTTCCCCAAGGCTGGTACC | + |
Preference number: 6 (lower is better) Translates to: CQKLVNALQNQL*LKCRWFPKAGT Trigger: GGTACCAGCCTTGGGGAACCACCTACACTTGAGCCACAATTGGTTTTGAAGTGCATTTACAAGTTTCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000416330.2 ENST00000417942.5 ENST00000647696.1 ENST00000648829.1 ENST00000650627.1 |
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CDS CCA 72 bp | TCTGCACTCGTTAGCAACATCCCACAGAAGGTGGGATaGGGTGAGAATCCATTTTTATTGCACAGAACCATG | + |
Preference number: 6 (lower is better) Translates to: SALVSNIPQKVG*GENPFLLHRTM Trigger: CATGGTTCTGTGCAATAAAAATGGATTCTCACCCCATCCCACCTTCTGTGGGATGTTGCTAACGAGTGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CCA 72 bp | ACACTGCACCAACACACCAAAGTGGTAGGGAGATCTTaGACTGATGGGCTGAAAAATGGGACAATCAGTACT | + |
Preference number: 6 (lower is better) Translates to: TLHQHTKVVGRS*TDGLKNGTIST Trigger: AGTACTGATTGTCCCATTTTTCAGCCCATCAGTCCAAGATCTCCCTACCACTTTGGTGTGTTGGTGCAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 72 bp | AGACTTTATCTTCCTATCTGGGACCAGGAAAGTATCTaGACAGAACCTCCTGACCTAGGGTTGTTGCCCAGT | + |
Preference number: 6 (lower is better) Translates to: RLYLPIWDQESI*TEPPDLGLLPS Trigger: ACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTGGTCCCAGATAGGAAGATAAAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 72 bp | CTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTaGGAACATGGGCTTTCCATCTTAGTCCTCGGGTCT | + |
Preference number: 6 (lower is better) Translates to: LLLVSGLRLLSI*EHGLSILVLGS Trigger: AGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 72 bp | AGGATTGTGCACATAAACTGTCCTAGTACAGAGGTCTaGAGTAGTAAGGGTCCCCTGCTGGAATACAAAGGG | + |
Preference number: 6 (lower is better) Translates to: RIVHINCPSTEV*SSKGPLLEYKG Trigger: CCCTTTGTATTCCAGCAGGGGACCCTTACTACTCAAGACCTCTGTACTAGGACAGTTTATGTGCACAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS TCA 72 bp | AAGGAGAAACTAATGCTTTCTCAACCAAGAGAGCCATaGAGCCACACAGAAAAGGTCGGATGTGGTCTAACC | + |
Preference number: 6 (lower is better) Translates to: KEKLMLSQPREP*SHTEKVGCGLT Trigger: GGTTAGACCACATCCGACCTTTTCTGTGTGGCTTCATGGCTCTCTTGGTTGAGAAAGCATTAGTTTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649353.1 |
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CDS GCA 72 bp | TTAGACATAGGTATCTCCTGTCTCTACTTTCTAGCCTaGTTGGTCTCCCTAAAGTCCTCTAATGACAAGCCC | + |
Preference number: 6 (lower is better) Translates to: LDIGISCLYFLA*LVSLKSSNDKP Trigger: GGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS CCA 72 bp | CATGCCCCATCTCCACCTAGGGATCGTCAAAGGGAATaGATCACTAACACTGTAAAACAACAAGCCTATTCT | + |
Preference number: 6 (lower is better) Translates to: HAPSPPRDRQRE*ITNTVKQQAYS Trigger: AGAATAGGCTTGTTGTTTTACAGTGTTAGTGATCCATTCCCTTTGACGATCCCTAGGTGGAGATGGGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000602863.2 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650548.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 72 bp | CCATCTCCTCAATCAGGCCAGGAAGCATGTATCTTCTaGACAGGACTTTATCTCTCTACTCAGCTTAGTACA | + |
Preference number: 6 (lower is better) Translates to: PSPQSGQEACIF*TGLYLSTQLST Trigger: TGTACTAAGCTGAGTAGAGAGATAAAGTCCTGTCCAGAAGATACATGCTTCCTGGCCTGATTGAGGAGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS CAA 72 bp | GCCATGGTTCACATTAACTATCCTAGTGCAAAGGTCTaGACTAGAGGTCATCCACTGCTGAACACTAGGGAA | + |
Preference number: 6 (lower is better) Translates to: AMVHINYPSAKV*TRGHPLLNTRE Trigger: TTCCCTAGTGTTCAGCAGTGGATGACCTCTAGTCAAGACCTTTGCACTAGGATAGTTAATGTGAACCATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CAA 90 bp | GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTGACGTGTGGTGGTTGTTT | + |
Preference number: 6 (lower is better) Translates to: AEDSALCTACRKYND*ADRNNEELDVWWLF Trigger: AAACAACCACCACACGTCAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 90 bp | GCTGGGGAGGAACTGGATGCTAGGCAGGCAGGATACAACGAAAAATaGAAATACTCCAATATAATAAGTCTGAATAGAGGACACCAGACC | + |
Preference number: 6 (lower is better) Translates to: AGEELDARQAGYNEK*KYSNIISLNRGHQT Trigger: GGTCTGGTGTCCTCTATTCAGACTTATTATATTGGAGTATTTCAATTTTTCGTTGTATCCTGCCTGCCTAGCATCCAGTTCCTCCCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CAA 90 bp | GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTTTTCTCCAGATAGCTGGC | + |
Preference number: 6 (lower is better) Translates to: AEDSALCTACRKYND*ADRNNEELFLQIAG Trigger: GCCAGCTATCTGGAGAAAAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650366.1 |
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CDS TCA 72 bp | TTACCTAATAGCTGCAAATATGGACACCTGAGATTGTaGGCAATAGTCTGTAAAAAGGGGCCAAGGGCACAC | + |
Preference number: 6 (lower is better) Translates to: LPNSCKYGHLRL*AIVCKKGPRAH Trigger: GTGTGCCCTTGGCCCCTTTTTACAGACTATTGCTCACAATCTCAGGTGTCCATATTTGCAGCTATTAGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 72 bp | CACAAAATAAAGGATGGCAATCCAGCTCCCTGGGTCTaGCTTGCCTTCAGTATTTTGCACAGTAAAGCAGTA | + |
Preference number: 6 (lower is better) Translates to: HKIKDGNPAPWV*LAFSILHSKAV Trigger: TACTGCTTTACTGTGCAAAATACTGAAGGCAAGTCAGACCCAGGGAGCTGGATTGCCATCCTTTATTTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS GCA 72 bp | AGCCCCAAATCAATTCATTCAGATAGGTTTAGCTCATaGAATGCACATGACTTCCTCTGCCTGACCTGCTAT | + |
Preference number: 6 (lower is better) Translates to: SPKSIHSDRFSS*NAHDFLCLTCY Trigger: ATAGCAGGTCAGGCAGAGGAAGTCATGTGCATTGCATGAGCTAAACCTATCTGAATGAATTGATTTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650637.1 |
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CDS GCA 72 bp | AGGGGCTCTAAGAATGAGTCAGTCCCACTGCTGTTATaGAAAGATGTTTGCAAAGGCCATAGTGTAACTAAC | + |
Preference number: 6 (lower is better) Translates to: RGSKNESVPLLL*KDVCKGHSVTN Trigger: GTTAGTTACACTATGGCCTTTGCAAACATCTTTGCATAACAGCAGTGGGACTGACTCATTCTTAGAGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS GCA 72 bp | TTGCCAACCTTCGCAAATAGCCAAACACAATGGCTATaGTCTATCCCTTTCATCTCTTTCCATGGCTCCAAA | + |
Preference number: 6 (lower is better) Translates to: LPTFANSQTQWL*SIPFISFHGSK Trigger: TTTGGAGCCATGGAAAGAGATGAAAGGGATAGAGCATAGCCATTGTGTTTGGCTATTTGCGAAGGTTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS CCA 72 bp | CCTGTTGCTGAAAATACTTCAAGATTCAAGGTGGTGTaGCAACTGCTACTACTGCTTAGAGGTGCAATTGTC | + |
Preference number: 6 (lower is better) Translates to: PVAENTSRFKVV*QLLLLLRGAIV Trigger: GACAATTGCACCTCTAAGCAGTAGTAGCAGTTGCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS CCA 72 bp | GTCATCCTGTTGCTGAAAATACTTCAAGATTCAAGGTaGTGTGGCAACTGCTACTACTGCTTAGAGGTGCAA | + |
Preference number: 6 (lower is better) Translates to: VILLLKILQDSR*CGNCYYCLEVQ Trigger: TTGCACCTCTAAGCAGTAGTAGCAGTTGCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS CAA 72 bp | TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTGACGTGTGG | + |
Preference number: 6 (lower is better) Translates to: SALCTACRKYND*ADRNNEELDVW Trigger: CCACACGTCAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 72 bp | CAAAACAACAGGACTTTGGTTGATCAGGACACCCTGTaGTACTACAAAGGAAAGGTGATGGGGTATGACCTT | + |
Preference number: 6 (lower is better) Translates to: QNNRTLVDQDTL*YYKGKVMGYDL Trigger: AAGGTCATACCCCATCACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS CAA 72 bp | GCGCAATGCAAAAGGGTTGGGAGTATGGACCACTGTTaGATAGACAAGTGCATGGAATACTCCAATGCTTAT | + |
Preference number: 6 (lower is better) Translates to: AQCKRVGSMDHC*IDKCMEYSNAY Trigger: ATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTCCCAACCCTTTTGCATTGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 72 bp | GGGCTGACACTAAATTTGTGGCTAATGGTCATCCTGTaGCTGAAAATACTTCAAGATTCAAGGTGGTGTGGC | + |
Preference number: 6 (lower is better) Translates to: GLTLNLWLMVIL*LKILQDSRWCG Trigger: GCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGGATGACCATTAGCCACAAATTTAGTGTCAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602495.1 |
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CDS CAA 90 bp | ATTAACTGTTCAAATGTAAAGATCATAAGGAGTGGGCACCCACTATaGAAAAGAGGTGGGGCATCCTTGTCTAGGGCACAAGAACCAACA | + |
Preference number: 6 (lower is better) Translates to: INCSNVKIIRSGHPL*KRGGASLSRAQEPT Trigger: TGTTGGTTCTTGTGCCCTAGACAAGGATGCCCCACCTCTTTTCAATAGTGGGTGCCCACTCCTTATGATCTTTACATTTGAACAGTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS CAA 90 bp | AGAAGTGTAAACAATAGAAAAGAGGTAGGGTTTAGGGTTCTCATCTaGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTGGGTTCT | + |
Preference number: 6 (lower is better) Translates to: RSVNNRKEVGFRVLI*GFPQVFKLLSFLGS Trigger: AGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGTTTACACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS TCA 72 bp | TACAGGAACATGCTTAGAGAATTGAGTTTGTGCACATaGACATTCCAAGTGACAGTCTTGAGTAGTGGGCAC | + |
Preference number: 6 (lower is better) Translates to: YRNMLRELSLCT*TFQVTVLSSGH Trigger: GTGCCCACTACTCAAGACTGTCACTTGGAATGTTCATGTGCACAAACTCAATTCTCTAAGCATGTTCCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS TCA 72 bp | TTCATGTATAATGGGTGGGACCAAGGAAAGTGCAACTaGGAATTGTTTAAGTCCAAGAGAAAGGGCCTTGTC | + |
Preference number: 6 (lower is better) Translates to: FMYNGWDQGKCN*ELFKSKRKGLV Trigger: GACAAGGCCCTTTCTCTTGGACTTAAACAATTCTCAGTTGCACTTTCCTTGGTCCCACCCATTATACATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS TCA 72 bp | TCAAACCAAAGATGTTCTTCTATCTTCAGCTGTCAGTaGTCTAATGCCCTCATCTCTCTTATCCTCAGGACC | + |
Preference number: 6 (lower is better) Translates to: SNQRCSSIFSCQ*SNALISLILRT Trigger: GGTCCTGAGGATAAGAGAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAAGAACATCTTTGGTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS CCA 72 bp | AATAATCTGCACTCGTTAGCAACATCCCACAGAAGGTaGGATGGGGTGAGAATCCATTTTTATTGCACAGAA | + |
Preference number: 6 (lower is better) Translates to: NNLHSLATSHRR*DGVRIHFYCTE Trigger: TTCTGTGCAATAAAAATGGATTCTCACCCCATCCCACCTTCTGTGGGATGTTGCTAACGAGTGCAGATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CCA 72 bp | CTTAGTGAATATCATCCCCCTGCTCTAAAGCAAAGGTaGTACAGGAACATGCTTAGAGAATTGAGTTTGTGC | + |
Preference number: 6 (lower is better) Translates to: LSEYHPPALKQR*YRNMLRELSLC Trigger: GCACAAACTCAATTCTCTAAGCATGTTCCTGTACCACCTTTGCTTTAGAGCAGGGGGATGATATTCACTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS CCA 72 bp | CAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTCTCACTTGTTG | + |
Preference number: 6 (lower is better) Translates to: QLSALLVGSIMI*QIGTMKSSHLL Trigger: CAACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648091.1 ENST00000648829.1 ENST00000648927.2 |
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CDS CCA 72 bp | TTCTGTAAGGCTTTAAGAGAGACTTTGGGGACCACATaGAACAGAATGATTTGCCCATGTGATCAATGTCAC | + |
Preference number: 6 (lower is better) Translates to: FCKALRETLGTT*NRMICPCDQCH Trigger: GTGACATTGATCACATGGGCAAATCATTCTGTTCCATGTGGTCCCCAAAGTCTCTCTTAAAGCCTTACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648927.2 |
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CDS CAA 72 bp | AGGAACAATGAAGAGCTTGACGTGTGGTGGTTGTTTTaGAGACTTTATCTTCCTATCTGGGACCAGGAAAGT | + |
Preference number: 6 (lower is better) Translates to: RNNEELDVWWLF*RLYLPIWDQES Trigger: ACTTTCCTGGTCCCAGATAGGAAGATAAAGTCTCAAAAACAACCACCACACGTCAAGCTCTTCATTGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000650186.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 72 bp | AACAATAGAAAAGAGGTAGGGTTTAGGGTTCTCATCTaGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTC | + |
Preference number: 6 (lower is better) Translates to: NNRKEVGFRVLI*GFPQVFKLLSF Trigger: GAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CAA 72 bp | CAGAAGAAGCCCAAGCTCCATGTATCAGTACTCAATTaGGAAAGGTCAAGGAAGAGCTATCAAGTAAAGCCT | + |
Preference number: 6 (lower is better) Translates to: QKKPKLHVSVLN*ERSRKSYQVKP Trigger: AGGCTTTACTTGATAGCTCTTCCTTGACCTTTCCAAATTGAGTACTGATACATGGAGCTTGGGCTTCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647696.1 ENST00000647913.2 |
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CDS CAA 90 bp | TTAACAGTCCAAAACAACAGGACTTTGGTTGATCAGGACACCCTGTaGTACTACAAAGGAAAGGTGATGGGGTATGACCTTAATCTACTG | + |
Preference number: 6 (lower is better) Translates to: LTVQNNRTLVDQDTL*YYKGKVMGYDLNLL Trigger: CAGTAGATTAAGGTCATACCCCATCACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTGGACTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS TCA 72 bp | CATCAGTCTAATTCCATCTTCTGCTCTAATTGGCTGTaGTCAATTCCACCCCCATTTCTAATTGGTTGGGTT | + |
Preference number: 6 (lower is better) Translates to: HQSNSIFCSNWL*SIPPPFLIGWV Trigger: AACCCAACCAATTAGAAATGGGGGTGGAATTGATCACAGCCAATTAGAGCAGAAGATGGAATTAGACTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650627.1 ENST00000650637.1 |
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CDS TCA 72 bp | AAAGAGGGTGTGATAGGTCAGAAACCCAAGTCTAATTaGAGGACCATTGACAACTGCAATTACATGCCATCT | + |
Preference number: 6 (lower is better) Translates to: KEGVIGQKPKSN*RTIDNCNYMPS Trigger: AGATGGCATGTAATTGCAGTTGTCAATGGTCCTTCAATTAGACTTGGGTTTCTGACCTATCACACCCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429829.6 ENST00000650186.1 ENST00000650627.1 |
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CDS TCA 72 bp | GCACATATTAACAGTCCAAAACAACAGGACTTTGGTTaGTCAGGACACCCTGTTGTACTACAAAGGAAAGGT | + |
Preference number: 6 (lower is better) Translates to: AHINSPKQQDFG*SGHPVVLQRKG Trigger: ACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTGGACTGTTAATATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS GCA 72 bp | TTCAAATTTCTTGGACCTGCTGAAGACTCAGCTCTCTaGACTGCTTGTAGGAAGTATAATGATTTGGCAGAT | + |
Preference number: 6 (lower is better) Translates to: FKFLGPAEDSAL*TACRKYNDLAD Trigger: ATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGCAGGTCCAAGAAATTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000421322.3 ENST00000429829.6 ENST00000433732.2 ENST00000434839.3 ENST00000445814.2 ENST00000602495.1 ENST00000602587.5 ENST00000635841.2 ENST00000647696.1 ENST00000647913.2 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649353.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 72 bp | TCAGTACTGTGTTTATTAATAACACAGAAGGGGCTTTaGGTAGTCAGCATACTCAGAAGCAATGCGAAAGGA | + |
Preference number: 6 (lower is better) Translates to: SVLCLLITQKGL*VVSILRSNAKG Trigger: TCCTTTCGCATTGCTTCTGAGTATGCTGACTACCCAAAGCCCCTTCTGTGTTATTAATAAACACAGTACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000665247.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CCA 72 bp | ATAGGTAAAAGCTGTGATTTAAAGCTGGCTCAAGACTaGCCCAGGCATAATACTGTCAATCTAAAGGTAACC | + |
Preference number: 6 (lower is better) Translates to: IGKSCDLKLAQD*PRHNTVNLKVT Trigger: GGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAGTCTTGAGCCAGCTTTAAATCACAGCTTTTACCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS CCA 72 bp | ACATCATTACTCTTTGCCATCCAAACTGATAAGGTTTaGGGGAAGAGAAGAGGCATTAGCTCAGTTCAGATA | + |
Preference number: 6 (lower is better) Translates to: TSLLFAIQTDKV*GKRRGISSVQI Trigger: TATCTGAACTGAGCTAATGCCTCTTCTCTTCCCCCAAACCTTATCAGTTTGGATGGCAAAGAGTAATGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS CCA 72 bp | CAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTTTTTCTCCAGA | + |
Preference number: 6 (lower is better) Translates to: QLSALLVGSIMI*QIGTMKSFFSR Trigger: TCTGGAGAAAAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650366.1 |
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CDS CAA 72 bp | ACAGAGTCCCTTTCTAATGGACAGGACTCTGGACAATaGCAACTGTGCAAATTAACTGTTCAAGAGCTGTTA | + |
Preference number: 6 (lower is better) Translates to: TESLSNGQDSGQ*QLCKLTVQELL Trigger: TAACAGCTCTTGAACAGTTAATTTGCACAGTTGCAATTGTCCAGAGTCCTGTCCATTAGAAAGGGACTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CAA 72 bp | TTTCAATTATATGTTGATAGTCCACCAGAAGGGGCCTaGGAGGGAAACAGTATACCCCACAGTAATGCAAAA | + |
Preference number: 6 (lower is better) Translates to: FQLYVDSPPEGA*EGNSIPHSNAK Trigger: TTTTGCATTACTGTGGGGTATACTGTTTCCCTCCAAGGCCCCTTCTGGTGGACTATCAACATATAATTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS CAA 72 bp | GTATCTACGATATGCATTATCCATGGTCATCTGTTCTaGGGCAGAAATGTAGTAAAATTGTGGAAGGAGCCG | + |
Preference number: 6 (lower is better) Translates to: VSTICIIHGHLF*GRNVVKLWKEP Trigger: CGGCTCCTTCCACAATTTTACTACATTTCTGCCCAAGAACAGATGACCATGGATAATGCATATCGTAGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS CAA 72 bp | TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTCTCACTTGTT | + |
Preference number: 6 (lower is better) Translates to: SALCTACRKYND*ADRNNEELSLV Trigger: AACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648091.1 ENST00000648829.1 ENST00000648927.2 |
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CDS CAA 72 bp | TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTTTTCTCCAG | + |
Preference number: 6 (lower is better) Translates to: SALCTACRKYND*ADRNNEELFLQ Trigger: CTGGAGAAAAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650366.1 |
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CDS CAA 90 bp | GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCAAATATCACTTGATGAGTCA | + |
Preference number: 6 (lower is better) Translates to: AEDSALCTACRKYND*ADRNNEEQISLDES Trigger: TGACTCATCAAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433732.2 |
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CDS CAA 90 bp | TATAAGATGCAGAAGAAGCCCAAGCTCCATGTATCAGTACTCAATTaGGAAAGGTCAAGGAAGAGCTATCAAGTAAAGCCTAAGTCACCA | + |
Preference number: 6 (lower is better) Translates to: YKMQKKPKLHVSVLN*ERSRKSYQVKPKSP Trigger: TGGTGACTTAGGCTTTACTTGATAGCTCTTCCTTGACCTTTCCAAATTGAGTACTGATACATGGAGCTTGGGCTTCTTCTGCATCTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647696.1 ENST00000647913.2 |
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CDS CAA 90 bp | GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTCTCACTTGTTGTATTATAC | + |
Preference number: 6 (lower is better) Translates to: AEDSALCTACRKYND*ADRNNEELSLVVLY Trigger: GTATAATACAACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648091.1 ENST00000648927.2 |
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CDS TCA 72 bp | TTAGGTAACCAGCACCCTCTTGATGTAAAGCAAAGATaGTGCAGGGACCTTGATATAAAAGACTCAGTTCTA | + |
Preference number: 6 (lower is better) Translates to: LGNQHPLDVKQR*CRDLDIKDSVL Trigger: TAGAACTGAGTCTTTTATATCAAGGTCCCTGCATCATCTTTGCTTTACATCAAGAGGGTGCTGGTTACCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS TCA 72 bp | ATCCCTTGCTGTAAAACAAGGAGGATAAAATGGATCTaGTCTGAAAGACATTGTTGTGATCAGTTGCCATGG | + |
Preference number: 6 (lower is better) Translates to: IPCCKTRRIKWI*SERHCCDQLPW Trigger: CCATGGCAACTGATCACAACAATGTCTTTCAGATCAGATCCATTTTATCCTCCTTGTTTTACAGCAAGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS GCA 72 bp | GGACAGGACTTTATCTCTCTACTCAGCTTAGTACACTaGCTTATATTAGTCCATTTGTCCCATGTTTTCATC | + |
Preference number: 6 (lower is better) Translates to: GQDFISLLSLVH*LILVHLSHVFI Trigger: GATGAAAACATGGGACAAATGGACTAATATAAGGCAGTGTACTAAGCTGAGTAGAGAGATAAAGTCCTGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS GCA 72 bp | TTCTTATACGCACTTGATTATGTAATAAGAGGGTATTaGTTGGGTCTACTGCATAACCTCTCATGTTTCCGG | + |
Preference number: 6 (lower is better) Translates to: FLYALDYVIRGY*LGLLHNLSCFR Trigger: CCGGAAACATGAGAGGTTATGCAGTAGACCCAAGCAATACCCTCTTATTACATAATCAAGTGCGTATAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647696.1 ENST00000647913.2 |
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CDS CCA 72 bp | CAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCAAATATCACTTG | + |
Preference number: 6 (lower is better) Translates to: QLSALLVGSIMI*QIGTMKSKYHL Trigger: CAAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433732.2 |
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CDS CCA 72 bp | TTTCATCATGAAGCATTACTTGGGTTTGAGAAACAATaGCACAGACCATGTTTCCAAGAAGGTTCAAGACCA | + |
Preference number: 6 (lower is better) Translates to: FHHEALLGFEKQ*HRPCFQEGSRP Trigger: TGGTCTTGAACCTTCTTGGAAACATGGTCTGTGCCATTGTTTCTCAAACCCAAGTAATGCTTCATGATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS CCA 72 bp | TCTCCAGTCTTTATTACTGAGCGATCCTCTACAATGTaGGTTGTTAATACCCTTGTGTTCTCAGCACAAAAT | + |
Preference number: 6 (lower is better) Translates to: SPVFITERSSTM*VVNTLVFSAQN Trigger: ATTTTGTGCTGAGAACACAAGGGTATTAACAACCCACATTGTAGAGGATCGCTCAGTAATAAAGACTGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649353.1 |
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CDS CAA 72 bp | TTATACGCACTTGATTATGTAATAAGAGGGTATTGCTaGGGTCTACTGCATAACCTCTCATGTTTCCGGGAA | + |
Preference number: 6 (lower is better) Translates to: LYALDYVIRGYC*GLLHNLSCFRE Trigger: TTCCCGGAAACATGAGAGGTTATGCAGTAGACCCAAGCAATACCCTCTTATTACATAATCAAGTGCGTATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647696.1 ENST00000647913.2 |
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CDS CAA 90 bp | ACTGCAATTACATGCCATCTACAGTTCGAAGAGAAGGGCTTAATATaGATTAGCACTCTCTGCTTTGATAAGTACAGGAGTCCTGATAAA | + |
Preference number: 6 (lower is better) Translates to: TAITCHLQFEEKGLI*ISTLCFDKYRSPDK Trigger: TTTATCAGGACTCCTGTACTTATCAAAGCAGAGAGTGCTAATCAATATTAAGCCCTTCTCTTCGAACTGTAGATGGCATGTAATTGCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS TCA 72 bp | GATGGCTTAAGATTACTTTCTGGTGGTCACCCATGCTaGACAATATTTTTCAATCTTCCAAACAGCAAAGAC | + |
Preference number: 6 (lower is better) Translates to: DGLRLLSGGHPC*TIFFNLPNSKD Trigger: GTCTTTGCTGTTTGGAAGATTGAAAAATATTGTTCAGCATGGGTGACCACCAGAAAGTAATCTTAAGCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000416330.2 ENST00000417942.5 ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648829.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000666954.1 ENST00000669898.1 |
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CDS TCA 72 bp | CTGAAATACAGTATCACCTATATGAATGTCTGCTCCTaGGGGAAGTTAACAAAAGCCAGATTAGATACTGAC | + |
Preference number: 6 (lower is better) Translates to: LKYSITYMNVCS*GKLTKARLDTD Trigger: GTCAGTATCTAATCTGGCTTTTGTTAACTTCCCTCAGGAGCAGACATTCATATAGGTGATACTGTATTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 17 transcripts: ENST00000429829.6 ENST00000434839.3 ENST00000635841.2 ENST00000647696.1 ENST00000648091.1 ENST00000648607.1 ENST00000648829.1 ENST00000648927.2 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650186.1 ENST00000650366.1 ENST00000650548.1 ENST00000650627.1 ENST00000650637.1 ENST00000669898.1 |
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CDS TCA 72 bp | CCCCCAGTTGTTATCTCTAAGGATAAGAGTAATCAATaGTCATTCAGCAGATATAGCTTATATATGGGTGGC | + |
Preference number: 6 (lower is better) Translates to: PPVVISKDKSNQ*SFSRYSLYMGG Trigger: GCCACCCATATATAAGCTATATCTGCTGAATGATCATTGATTACTCTTATCCTTAGAGATAACAACTGGGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS GCA 72 bp | CCACTGTTTGATAGACAAGTGCATGGAATACTCCAATaGTTATACTTTATTATGCCATGGGAAACTAAGGGT | + |
Preference number: 6 (lower is better) Translates to: PLFDRQVHGILQ*LYFIMPWETKG Trigger: ACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS CAA 72 bp | TTGCAACTGTGCAAATTAACTGTTCAAGAGCTGTTATaGAATAATCTGCACTCGTTAGCAACATCCCACAGA | + |
Preference number: 6 (lower is better) Translates to: LQLCKLTVQELL*NNLHSLATSHR Trigger: TCTGTGGGATGTTGCTAACGAGTGCAGATTATTCAATAACAGCTCTTGAACAGTTAATTTGCACAGTTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CAA 72 bp | TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCAAATATCACTT | + |
Preference number: 6 (lower is better) Translates to: SALCTACRKYND*ADRNNEEQISL Trigger: AAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433732.2 |
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CDS CAA 72 bp | TTTAGAAGGTGTTTCATCATGAAGCATTACTTGGGTTaGAGAAACAATGGCACAGACCATGTTTCCAAGAAG | + |
Preference number: 6 (lower is better) Translates to: FRRCFIMKHYLG*RNNGTDHVSKK Trigger: CTTCTTGGAAACATGGTCTGTGCCATTGTTTCTCAAACCCAAGTAATGCTTCATGATGAAACACCTTCTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647913.2 |
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CDS GCA 72 bp | TCCCTCATTTCCAAGAGAAATTTAGAACTGAGTAATTaGCAATATTCCCATGCTGCATTTTATTCTCCAGTC | + |
Preference number: 6 (lower is better) Translates to: SLISKRNLELSN*QYSHAAFYSPV Trigger: GACTGGAGAATAAAATGCAGCATGGGAATATTGGCAATTACTCAGTTCTAAATTTCTCTTGGAAATGAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649353.1 |
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CDS CCA 72 bp | ATTGTGACATCTAGATGGCTTAAGATTACTTTCTGGTaGTCACCCATGCTGAACAATATTTTTCAATCTTCC | + |
Preference number: 6 (lower is better) Translates to: IVTSRWLKITFW*SPMLNNIFQSS Trigger: GGAAGATTGAAAAATATTGTTCAGCATGGGTGACCACCAGAAAGTAATCTTAAGCCATCTAGATGTCACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000416330.2 ENST00000417942.5 ENST00000421322.3 ENST00000429829.6 ENST00000434839.3 ENST00000647696.1 ENST00000647913.2 ENST00000648607.1 ENST00000648829.1 ENST00000650366.1 ENST00000650627.1 ENST00000666954.1 ENST00000669898.1 |
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CDS CCA 72 bp | GAATGCAAATGGGGTTCAGAGTGCTGTCTAATCCAATaGGTAGGATTATTGGCAATTAGAATTTTACTCAAT | + |
Preference number: 6 (lower is better) Translates to: ECKWGSECCLIQ*VGLLAIRILLN Trigger: ATTGAGTAAAATTCTAATTGCCAATAATCCTACCCATTGGATTAGACAGCACTCTGAACCCCATTTGCATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CAA 90 bp | AACGGAATATCCCAGTATAATAGGATAAGCAATGGACAACTTATTTaGAGCACTGAATCAATGAAAATTAGAGTGACTTTCGAGAGAAGC | + |
Preference number: 6 (lower is better) Translates to: NGISQYNRISNGQLI*STESMKIRVTFERS Trigger: GCTTCTCTCGAAAGTCACTCTAATTTTCATTGATTCAGTGCTCAAAATAAGTTGTCCATTGCTTATCCTATTATACTGGGATATTCCGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429829.6 ENST00000650627.1 |
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CDS CAA 90 bp | TTGTTCCTGTGTTTCCACCATAAGATAAATGAGATAAAGTGCACTTaGGTTTACGTCTTTCAAGCACTTAAGAACAGCACTTTATTCAGT | + |
Preference number: 6 (lower is better) Translates to: LFLCFHHKINEIKCT*VYVFQALKNSTLFS Trigger: ACTGAATAAAGTGCTGTTCTTAAGTGCTTGAAAGACGTAAACCAAAGTGCACTTTATCTCATTTATCTTATGGTGGAAACACAGGAACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000650366.1 |
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CDS TCA 72 bp | TTATTAATGCTATTAATTGTCCAAGAGCTGAGATTATaGGTAGTTAACACTTCTCAGCAGCAATCCAAAGGG | + |
Preference number: 6 (lower is better) Translates to: LLMLLIVQELRL*VVNTSQQQSKG Trigger: CCCTTTGGATTGCTGCTGAGAAGTGTTAACTACTCATAATCTCAGCTCTTGGACAATTAATAGCATTAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 ENST00000669898.1 |
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CDS GCA 72 bp | CTCTGTTGTAGGTTCAATAATGATAATAAATGTTTGTaGCCCCAGTTGTTATCTCTAAGGATAAGAGTAATC | + |
Preference number: 6 (lower is better) Translates to: LCCRFNNDNKCL*PQLLSLRIRVI Trigger: GATTACTCTTATCCTTAGAGATAACAACTGGGGGCACAAACATTTATTATCATTATTGAACCTACAACAGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |
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CDS GCA 72 bp | GTTCCAGATTTTTCTACAGTACGTACCATCATTGTTTaGAGATCTGATCTAAAGACTTACTCTCTTTCTTTT | + |
Preference number: 6 (lower is better) Translates to: VPDFSTVRTIIV*RSDLKTYSLSF Trigger: AAAAGAAAGAGAGTAAGTCTTTAGATCAGATCTGCAAACAATGATGGTACGTACTGTAGAAAAATCTGGAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000647696.1 ENST00000647913.2 |
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CDS CCA 72 bp | AAAAGAGGTATAATGGTCCTAGAAGTGATAGGGTTGTaGACAACTGCAATTATTCACATTAACTGTTCAAAT | + |
Preference number: 6 (lower is better) Translates to: KRGIMVLEVIGL*TTAIIHINCSN Trigger: ATTTGAACAGTTAATGTGAATAATTGCAGTTGTCCACAACCCTATCACTTCTAGGACCATTATACCTCTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000429829.6 ENST00000648607.1 ENST00000648991.1 ENST00000650186.1 ENST00000650366.1 ENST00000650627.1 ENST00000666309.1 |
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CDS CAA 72 bp | AACTACTATAGTGGCATTCTTCAGACAACCAATCCCTaGCGTATGCGTATTCAAAAGATAATCATTGTTATT | + |
Preference number: 6 (lower is better) Translates to: NYYSGILQTTNP*RMRIQKIIIVI Trigger: AATAACAATGATTATCTTTTGAATACGCATACGCAAGGGATTGGTTGTCTGAAGAATGCCACTATAGTAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000429829.6 ENST00000648970.1 ENST00000648991.1 ENST00000649757.1 ENST00000650366.1 |