RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XIST (Homo sapiens)

Ensembl gene IDs: ENSG00000229807

Ensembl transcript IDs: ENST00000416330.2, ENST00000417942.5, ENST00000421322.3, ENST00000429829.6, ENST00000433732.2, ENST00000434839.3, ENST00000445814.2, ENST00000602495.1, ENST00000602587.5, ENST00000602863.2, ENST00000635841.2, ENST00000647696.1, ENST00000647913.2, ENST00000648091.1, ENST00000648607.1, ENST00000648829.1, ENST00000648927.2, ENST00000648970.1, ENST00000648991.1, ENST00000649353.1, ENST00000649757.1, ENST00000650186.1, ENST00000650366.1, ENST00000650548.1, ENST00000650627.1, ENST00000650637.1, ENST00000665247.1, ENST00000666309.1, ENST00000666954.1, ENST00000669898.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTGCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTTaGCACGGCTCACCACCATGTCCACACCAAGCAGGCCTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: LPPVGQRSSVIHSGP*HGSPPCPHQAGLEH
Trigger: GTGCTCCAGGCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 90 bp TCCTCTTCTGCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTaGTCCTTGCCACGGCTCACCACCATGTCCACACCAAGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SSSATCWPTIICDPF*SLPRLTTMSTPSRP
Trigger: AGGCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGAAGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS TCA 90 bp AGGCAGGAATTCCTCTTCTGCCACCTGTTGGCCAACGATCATCTGTaGTCCATTCTGGTCCTTGCCACGGCTCACCACCATGTCCACACC +
Preference number: 5 (lower is better)
Translates to: RQEFLFCHLLANDHL*SILVLATAHHHVHT
Trigger: GGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGAAGAGGAATTCCTGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS GCA 90 bp TCATCTCACATGGCAGCCTGGCATAAGGAACCGCTCCACAATGCTTaGTCTGATAGCCGACGTTCTGCACCTATCAGGCAGGGGTTAGGA +
Preference number: 5 (lower is better)
Translates to: SSHMAAWHKEPLHNA*SDSRRSAPIRQGLG
Trigger: TCCTAACCCCTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCATGTGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS GCA 90 bp GCCCCTCCACTTCTTTCTCCTGACTGGCTAAAGACAGCTGCGAAGTaGCATGCTAATTCACCCAGGTCTTCGCTGAGTAGCTGGACAGTG +
Preference number: 5 (lower is better)
Translates to: APPLLSPDWLKTAAK*HANSPRSSLSSWTV
Trigger: CACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCACTTCGCAGCTGTCTTTAGCCAGTCAGGAGAAAGAAGTGGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 90 bp AAGTGTAGGTGGTTCCCCAAGGCTGGTACCAATGAGACTGGGGTTTaGGAATTAGTTGGTCATCATCCCTCCTGCTGCCCAGCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: KCRWFPKAGTNETGV*ELVGHHPSCCPAVV
Trigger: GACCACTGCTGGGCAGCAGGAGGGATGATGACCAACTAATTCCCAAACCCCAGTCTCATTGGTACCAGCCTTGGGGAACCACCTACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000416330.2
ENST00000417942.5
ENST00000429829.6
ENST00000647696.1
ENST00000648829.1
ENST00000648970.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
CDS CCA 90 bp CCACTGGGAGACATACACGTGGCCCCTCCACTTCTTTCTCCTGACTaGCTAAAGACAGCTGCGAAGTGCCATGCTAATTCACCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PLGDIHVAPPLLSPD*LKTAAKCHANSPRS
Trigger: AGACCTGGGTGAATTAGCATGGCACTTCGCAGCTGTCTTTAGCCAGTCAGGAGAAAGAAGTGGAGGGGCCACGTGTATGTCTCCCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 90 bp TCACATGCTCAGAATGTCCTTGAAAACACCTGGTGTACCGCCCACTaGGAGACATACACGTGGCCCCTCCACTTCTTTCTCCTGACTGGC +
Preference number: 5 (lower is better)
Translates to: SHAQNVLENTWCTAH*ETYTWPLHFFLLTG
Trigger: GCCAGTCAGGAGAAAGAAGTGGAGGGGCCACGTGTATGTCTCCCAGTGGGCGGTACACCAGGTGTTTTCAAGGACATTCTGAGCATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434839.3
CDS GCA 90 bp CAAAGCCTCGCCCATCATGATGTGGCCTTCCCGCCACTTGAACACTaGGACAGAACTGGATCCGCCATTTTGGACAACCTAACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: QSLAHHDVAFPPLEH*DRTGSAILDNLTKH
Trigger: GTGCTTTGTTAGGTTGTCCAAAATGGCGGATCCAGTTCTGTCGCAGTGTTCAAGTGGCGGGAAGGCCACATCATGATGGGCGAGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 90 bp CTTGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTGGGTTCTaGGTCATGGGCCTCCAGATTCCGGCCGTTAGTCTTGAGATACCT +
Preference number: 5 (lower is better)
Translates to: LGISPGLQASILPGF*VMGLQIPAVSLEIP
Trigger: AGGTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS GCA 90 bp CAGAGACTCTTCTTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTaGTCCCTGAGCTGGGCCGATCTTTTGACATCCTTCTCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: QRLFFTAVRGASRAN*SLSWADLLTSFSEK
Trigger: TTTCTCGGAGAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAAGAAGAGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000602863.2
ENST00000648607.1
ENST00000648927.2
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp AGTCTAGGGCCTTGTTTTGGTCTTGGATCATCTCACATGGCAGCCTaGCATAAGGAACCGCTCCACAATGCTTGCTCTGATAGCCGACGT +
Preference number: 5 (lower is better)
Translates to: SLGPCFGLGSSHMAA*HKEPLHNACSDSRR
Trigger: ACGTCGGCTATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCATGTGAGATGATCCAAGACCAAAACAAGGCCCTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 90 bp TTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTGGGTTCTGGGTCATaGGCCTCCAGATTCCGGCCGTTAGTCTTGAGATACCTTTTTCGC +
Preference number: 5 (lower is better)
Translates to: FPQVFKLLSFLGSGS*ASRFRPLVLRYLFR
Trigger: GCGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS TCA 90 bp CAAGCCCGCCATGATGTCCACGTGACAAAAGCCATGATATACATATaGCAACGCCTGCCATATTGTCCCTGCGGCAAAACCCAACACGAA +
Preference number: 5 (lower is better)
Translates to: QARHDVHVTKAMIYI*QRLPYCPCGKTQHE
Trigger: TTCGTGTTGGGTTTTGCCGCAGGGACAATATGGCAGGCGTTGTCATATGTATATCATGGCTTTTGTCACGTGGACATCATGGCGGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 90 bp GTCCAACAAAAGACGGGTTGTCTGCGACCCCCTGCTGAATGCAAATaGGGTTCAGAGTGCTGTCTAATCCAATGGGTAGGATTATTGGCA +
Preference number: 5 (lower is better)
Translates to: VQQKTGCLRPPAECK*GSECCLIQWVGLLA
Trigger: TGCCAATAATCCTACCCATTGGATTAGACAGCACTCTGAACCCCATTTGCATTCAGCAGGGGGTCGCAGACAACCCGTCTTTTGTTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS TCA 90 bp CAGGTCTCACATGCTCAGAATGTCCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCAG +
Preference number: 5 (lower is better)
Translates to: QVSHAQNVQEEPKET*LLRTHAAWYLQWDQ
Trigger: CTGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGGACATTCTGAGCATGTGAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000648970.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 90 bp TTCTGCACCTATCAGGCAGGGGTTAGGAAGCCCCTCTGCCACACATaGCACACACACACGTACACTTGCCCACATATGCAAAGAAATATT +
Preference number: 5 (lower is better)
Translates to: FCTYQAGVRKPLCHT*HTHTYTCPHMQRNI
Trigger: AATATTTCTTTGCATATGTGGGCAAGTGTACGTGTGTGTGTGTCATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS TCA 90 bp CAGGTCTCACATGCTCAGAATGTCCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCTG +
Preference number: 5 (lower is better)
Translates to: QVSHAQNVQEEPKET*LLRTHAAWYLQWDL
Trigger: CAGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGGACATTCTGAGCATGTGAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602863.2
ENST00000635841.2
ENST00000648927.2
CDS TCA 90 bp CAGGTCTCACATGCTCAGAATGTCCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCCT +
Preference number: 5 (lower is better)
Translates to: QVSHAQNVQEEPKET*LLRTHAAWYLQWDP
Trigger: AGGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGGACATTCTGAGCATGTGAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647696.1
ENST00000647913.2
CDS CCA 90 bp GCTGCGAAGTGCCATGCTAATTCACCCAGGTCTTCGCTGAGTAGCTaGACAGTGTGTCATCAGTCTAATTCCATCTTCTGCTCTAATTGG +
Preference number: 5 (lower is better)
Translates to: AAKCHANSPRSSLSS*TVCHQSNSIFCSNW
Trigger: CCAATTAGAGCAGAAGATGGAATTAGACTGATGACACACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCACTTCGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS TCA 90 bp TCAAGTGCTAGAGTGCCAGGCATGTTGATCTTCAGGTGGGAAGGCTaGCTTCCTTCAGTGTGTTCAAATTTCTTGGACCTGCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: SSARVPGMLIFRWEG*LPSVCSNFLDLLKT
Trigger: AGTCTTCAGCAGGTCCAAGAAATTTGAACACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCTAGCACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000433732.2
ENST00000434839.3
ENST00000445814.2
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp TTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTGCTCCCTGAGCTaGGCCGATCTTTTGACATCCTTCTCCGAGAAACAATATTCTTTT +
Preference number: 5 (lower is better)
Translates to: FTAVRGASRANCSLS*ADLLTSFSEKQYSF
Trigger: AAAAGAATATTGTTTCTCGGAGAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000602863.2
ENST00000648607.1
ENST00000648927.2
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 90 bp CAAGCCTATTCTTCTGAGGAAGATCAAGAGGAGCCTAAGGAGACATaGCTACTAAGGACACATGCAGCGTGGTATCTTCAATGGGATCAG +
Preference number: 5 (lower is better)
Translates to: QAYSSEEDQEEPKET*LLRTHAAWYLQWDQ
Trigger: CTGATCCCATTGAAGATACCACGCTGCATGTGTCCTTAGTAGTCATGTCTCCTTAGGCTCCTCTTGATCTTCCTCAGAAGAATAGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648607.1
ENST00000648991.1
ENST00000650548.1
CDS GCA 90 bp ACTGAAGCATTAGACATAGGTATCTCCTGTCTCTACTTTCTAGCCTaGTTGGTCTCCCTAAAGTCCTCTAATGACAAGCCCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: TEALDIGISCLYFLA*LVSLKSSNDKPWQY
Trigger: GTACTGCCAGGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTCTAATGCTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS CCA 90 bp GCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTTGGAACATaGGCTTTCCATCTTAGTCCTCGGGTCTCAAGTCTCAAACCATCT +
Preference number: 5 (lower is better)
Translates to: AFVGFRPEASIYLGT*AFHLSPRVSSLKPS
Trigger: AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 90 bp TCCAATGCTTATACTTTATTATGCCATGGGAAACTAAGGGTGGGGTaGGGCGCTTGCTTAACAAGGTCAGGGAGGGAGAAAACCATTGAT +
Preference number: 5 (lower is better)
Translates to: SNAYTLLCHGKLRVG*GACLTRSGREKTID
Trigger: ATCAATGGTTTTCTCCCTCCCTGACCTTGTTAAGCAAGCGCCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp AGACAAGTGCATGGAATACTCCAATGCTTATACTTTATTATGCCATaGGAAACTAAGGGTGGGGTGGGGCGCTTGCTTAACAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: RQVHGILQCLYFIMP*ETKGGVGRLLNKVR
Trigger: CCTGACCTTGTTAAGCAAGCGCCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp CCATGGCTACCTGTGATTTTACACACTGGCGCAATGCAAAAGGGTTaGGAGTATGGACCACTGTTTGATAGACAAGTGCATGGAATACTC +
Preference number: 5 (lower is better)
Translates to: PWLPVILHTGAMQKG*EYGPLFDRQVHGIL
Trigger: GAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTCCCAACCCTTTTGCATTGCGCCAGTGTGTAAAATCACAGGTAGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp ACCCTCAGTCAGCCAGACAATGTTGTTAAGCATATGGAGTGGGGCTaGGAGGCATGGAAACAAGCCCTGAGGAAATATGGATATGAATTA +
Preference number: 5 (lower is better)
Translates to: TLSQPDNVVKHMEWG*EAWKQALRKYGYEL
Trigger: TAATTCATATCCATATTTCCTCAGGGCTTGTTTCCATGCCTCCCAGCCCCACTCCATATGCTTAACAACATTGTCTGGCTGACTGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS TCA 90 bp ACACATTCATTCAGCTATCCTCAAGTGCTAGAGTGCCAGGCATGTTaGTCTTCAGGTGGGAAGGCTGACTTCCTTCAGTGTGTTCAAATT +
Preference number: 5 (lower is better)
Translates to: THSFSYPQVLECQAC*SSGGKADFLQCVQI
Trigger: AATTTGAACACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCTAGCACTTGAGGATAGCTGAATGAATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000433732.2
ENST00000434839.3
ENST00000445814.2
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 90 bp GGGAGTGGAAGGGTTAGTGCACAAGATCGTGGACAAATACAATTATaGACATCAATGCACAAGAAGAGTCCTTGGGTGATCAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: GSGRVSAQDRGQIQL*TSMHKKSPWVISPH
Trigger: ATGTGGGCTGATCACCCAAGGACTCTTCTTGTGCATTGATGTTCATAATTGTATTTGTCCACGATCTTGTGCACTAACCCTTCCACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS TCA 90 bp GTAGAGGGGTTCATGTATAATGGGTGGGACCAAGGAAAGTGCAACTaGGAATTGTTTAAGTCCAAGAGAAAGGGCCTTGTCTGGTCAACA +
Preference number: 5 (lower is better)
Translates to: VEGFMYNGWDQGKCN*ELFKSKRKGLVWST
Trigger: TGTTGACCAGACAAGGCCCTTTCTCTTGGACTTAAACAATTCTCAGTTGCACTTTCCTTGGTCCCACCCATTATACATGAACCCCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 90 bp CACTGGAAACACAAAATAAAGGATGGCAATCCAGCTCCCTGGGTCTaGCTTGCCTTCAGTATTTTGCACAGTAAAGCAGTAACACAGGTG +
Preference number: 5 (lower is better)
Translates to: HWKHKIKDGNPAPWV*LAFSILHSKAVTQV
Trigger: CACCTGTGTTACTGCTTTACTGTGCAAAATACTGAAGGCAAGTCAGACCCAGGGAGCTGGATTGCCATCCTTTATTTTGTGTTTCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp TTCTCAACCAAGAGAGCCATGAAGCCACACAGAAAAGGTCGGATGTaGTCTAACCCTATGAGTTATGTAAGAATTCTCCTCCACAATGCC +
Preference number: 5 (lower is better)
Translates to: FSTKRAMKPHRKGRM*SNPMSYVRILLHNA
Trigger: GGCATTGTGGAGGAGAATTCTTACATAACTCATAGGGTTAGACCACATCCGACCTTTTCTGTGTGGCTTCATGGCTCTCTTGGTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649353.1
CDS TCA 90 bp CAAAGGTGGTACAGGAACATGCTTAGAGAATTGAGTTTGTGCACATaGACATTCCAAGTGACAGTCTTGAGTAGTGGGCACTACCTGCTA +
Preference number: 5 (lower is better)
Translates to: QRWYRNMLRELSLCT*TFQVTVLSSGHYLL
Trigger: TAGCAGGTAGTGCCCACTACTCAAGACTGTCACTTGGAATGTTCATGTGCACAAACTCAATTCTCTAAGCATGTTCCTGTACCACCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS GCA 90 bp CTCCTAACAAGCCCCAAATCAATTCATTCAGATAGGTTTAGCTCATaGAATGCACATGACTTCCTCTGCCTGACCTGCTATCATCCATCT +
Preference number: 5 (lower is better)
Translates to: LLTSPKSIHSDRFSS*NAHDFLCLTCYHPS
Trigger: AGATGGATGATAGCAGGTCAGGCAGAGGAAGTCATGTGCATTGCATGAGCTAAACCTATCTGAATGAATTGATTTGGGGCTTGTTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650637.1
CDS GCA 90 bp TCCAAGGGAAGGGGCTCTAAGAATGAGTCAGTCCCACTGCTGTTATaGAAAGATGTTTGCAAAGGCCATAGTGTAACTAACAGAACTATG +
Preference number: 5 (lower is better)
Translates to: SKGRGSKNESVPLLL*KDVCKGHSVTNRTM
Trigger: CATAGTTCTGTTAGTTACACTATGGCCTTTGCAAACATCTTTGCATAACAGCAGTGGGACTGACTCATTCTTAGAGCCCCTTCCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS GCA 90 bp TTGATAGACAAGTGCATGGAATACTCCAATGCTTATACTTTATTATaGCATGGGAAACTAAGGGTGGGGTGGGGCGCTTGCTTAACAAGG +
Preference number: 5 (lower is better)
Translates to: LIDKCMEYSNAYTLL*HGKLRVGWGACLTR
Trigger: CCTTGTTAAGCAAGCGCCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS GCA 90 bp GAGTATGGACCACTGTTTGATAGACAAGTGCATGGAATACTCCAATaGTTATACTTTATTATGCCATGGGAAACTAAGGGTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EYGPLFDRQVHGILQ*LYFIMPWETKGGVG
Trigger: CCCCACCCCACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp CTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTTGACGTGTGGTGGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LKTQLSALLVGSIMI*QIGTMKSLTCGGCF
Trigger: AAAACAACCACCACACGTCAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp ATGGGACAATCAGTACTGTGTTTATTAATAACACAGAAGGGGCTTTaGGTAGTCAGCATACTCAGAAGCAATGCGAAAGGAAGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: MGQSVLCLLITQKGL*VVSILRSNAKGSRG
Trigger: CCCTCTACTTCCTTTCGCATTGCTTCTGAGTATGCTGACTACCCAAAGCCCCTTCTGTGTTATTAATAAACACAGTACTGATTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 90 bp ACAGTGTGTCATCAGTCTAATTCCATCTTCTGCTCTAATTGGCTGTaGTCAATTCCACCCCCATTTCTAATTGGTTGGGTTATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TVCHQSNSIFCSNWL*SIPPPFLIGWVMQQ
Trigger: TTGCTGCATAACCCAACCAATTAGAAATGGGGGTGGAATTGATCACAGCCAATTAGAGCAGAAGATGGAATTAGACTGATGACACACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS GCA 90 bp AACAATATACAAAGGGGACAACAAGAGATTCTTAACCAGGCAATCTaGTCTGGAAAGAAGAATGCAGAGAAAGTGCCAACCTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: NNIQRGQQEILNQAI*SGKKNAEKVPTFLP
Trigger: AGGAAGGAAGGTTGGCACTTTCTCTGCATTCTTCTTTCCAGAGCAGATTGCCTGGTTAAGAATCTCTTGTTGTCCCCTTTGTATATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp AATGGTCATCCTGTTGCTGAAAATACTTCAAGATTCAAGGTGGTGTaGCAACTGCTACTACTGCTTAGAGGTGCAATTGTCTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: NGHPVAENTSRFKVV*QLLLLLRGAIVLTV
Trigger: AACAGTCAAGACAATTGCACCTCTAAGCAGTAGTAGCAGTTGCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGGATGACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS CCA 90 bp TCAGCAGGCCAGCTATGTCTTAAATACATGAGCTCCAACTTGAGTTaGATTTTTGAAGGAAACCTGTGTAAAATGCTACTTGCCTACAGC +
Preference number: 5 (lower is better)
Translates to: SAGQLCLKYMSSNLS*IFEGNLCKMLLAYS
Trigger: GCTGTAGGCAAGTAGCATTTTACACAGGTTTCCTTCAAAAATCCAACTCAAGTTGGAGCTCATGTATTTAAGACATAGCTGGCCTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647696.1
ENST00000647913.2
CDS TCA 90 bp TGTATTATACACCATGGCATCCCAAGCCATCCTGAAGTATGTAAATaGTTGGCAAAGTTCTTCTGTAAGGCTTTAAGAGAGACTTTGGGG +
Preference number: 5 (lower is better)
Translates to: CIIHHGIPSHPEVCK*LAKFFCKALRETLG
Trigger: CCCCAAAGTCTCTCTTAAAGCCTTACAGAAGAACTTTGCCAATCATTTACATACTTCAGGATGGCTTGGGATGCCATGGTGTATAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648927.2
CDS GCA 90 bp TTCAGTGTGTTCAAATTTCTTGGACCTGCTGAAGACTCAGCTCTCTaGACTGCTTGTAGGAAGTATAATGATTTGGCAGATAGGAACAAT +
Preference number: 5 (lower is better)
Translates to: FSVFKFLGPAEDSAL*TACRKYNDLADRNN
Trigger: ATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGCAGGTCCAAGAAATTTGAACACACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000433732.2
ENST00000434839.3
ENST00000445814.2
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS GCA 90 bp ATCACTAATTTGCCAACCTTCGCAAATAGCCAAACACAATGGCTATaGTCTATCCCTTTCATCTCTTTCCATGGCTCCAAAAGAGGTAAA +
Preference number: 5 (lower is better)
Translates to: ITNLPTFANSQTQWL*SIPFISFHGSKRGK
Trigger: TTTACCTCTTTTGGAGCCATGGAAAGAGATGAAAGGGATAGAGCATAGCCATTGTGTTTGGCTATTTGCGAAGGTTGGCAAATTAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS CCA 90 bp AAAAATTTTCCATCTCCTCAATCAGGCCAGGAAGCATGTATCTTCTaGACAGGACTTTATCTCTCTACTCAGCTTAGTACACTGCCTTAT +
Preference number: 5 (lower is better)
Translates to: KNFPSPQSGQEACIF*TGLYLSTQLSTLPY
Trigger: ATAAGGCAGTGTACTAAGCTGAGTAGAGAGATAAAGTCCTGTCCAGAAGATACATGCTTCCTGGCCTGATTGAGGAGATGGAAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS CCA 90 bp CTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCAAATATCACTTGATGAGTCAC +
Preference number: 5 (lower is better)
Translates to: LKTQLSALLVGSIMI*QIGTMKSKYHLMSH
Trigger: GTGACTCATCAAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433732.2
CDS CCA 90 bp TTAGCAATCACTAATTTGCCAACCTTCGCAAATAGCCAAACACAATaGCTATGCTCTATCCCTTTCATCTCTTTCCATGGCTCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: LAITNLPTFANSQTQ*LCSIPFISFHGSKR
Trigger: TCTTTTGGAGCCATGGAAAGAGATGAAAGGGATAGAGCATAGCCATTGTGTTTGGCTATTTGCGAAGGTTGGCAAATTAGTGATTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS TCA 90 bp AATGTAATTGCACATATTAACAGTCCAAAACAACAGGACTTTGGTTaGTCAGGACACCCTGTTGTACTACAAAGGAAAGGTGATGGGGTA +
Preference number: 5 (lower is better)
Translates to: NVIAHINSPKQQDFG*SGHPVVLQRKGDGV
Trigger: TACCCCATCACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTGGACTGTTAATATGTGCAATTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS TCA 90 bp TTTAAACAATCAAACCAAAGATGTTCTTCTATCTTCAGCTGTCAGTaGTCTAATGCCCTCATCTCTCTTATCCTCAGGACCCAGAATGGT +
Preference number: 5 (lower is better)
Translates to: FKQSNQRCSSIFSCQ*SNALISLILRTQNG
Trigger: ACCATTCTGGGTCCTGAGGATAAGAGAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAAGAACATCTTTGGTTTGATTGTTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS GCA 90 bp CAATGCAAAAGGGTTGGGAGTATGGACCACTGTTTGATAGACAAGTaGATGGAATACTCCAATGCTTATACTTTATTATGCCATGGGAAA +
Preference number: 5 (lower is better)
Translates to: QCKRVGSMDHCLIDK*MEYSNAYTLLCHGK
Trigger: TTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTCCCAACCCTTTTGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 90 bp GTGAGGACAAAGGATTTTGTCCTCATCTCAACAATGATCAGCTATTaGAACTGCATGAAACTGAACAATTTAAACCTGGAGCTGGTAATG +
Preference number: 5 (lower is better)
Translates to: VRTKDFVLISTMISY*NCMKLNNLNLELVM
Trigger: CATTACCAGCTCCAGGTTTAAATTGTTCAGTTTCATGCAGTTCCAATAGCTGATCATTGTTGAGATGAGGACAAAATCCTTTGTCCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650366.1
CDS CCA 90 bp GAGTTCAACCATATTTTTACCCTTTTCTTCATGTGGATTGAAGAGTaGACATTTACAGTTGTGCGGAGCTGTTATATTCTGGCTACCAAC +
Preference number: 5 (lower is better)
Translates to: EFNHIFTLFFMWIEE*TFTVVRSCYILATN
Trigger: GTTGGTAGCCAGAATATAACAGCTCCGCACAACTGTAAATGTCCACTCTTCAATCCACATGAAGAAAAGGGTAAAAATATGGTTGAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649353.1
CDS CCA 90 bp CTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTCTCACTTGTTGTATTATACA +
Preference number: 5 (lower is better)
Translates to: LKTQLSALLVGSIMI*QIGTMKSSHLLYYT
Trigger: TGTATAATACAACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648091.1
ENST00000648927.2
CDS CCA 90 bp GCATTTTATTCTCCAGTCTTTATTACTGAGCGATCCTCTACAATGTaGGTTGTTAATACCCTTGTGTTCTCAGCACAAAATATAGTAGGG +
Preference number: 5 (lower is better)
Translates to: AFYSPVFITERSSTM*VVNTLVFSAQNIVG
Trigger: CCCTACTATATTTTGTGCTGAGAACACAAGGGTATTAACAACCCACATTGTAGAGGATCGCTCAGTAATAAAGACTGGAGAATAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649353.1
CDS GCA 90 bp CTCTCTTATCCTCAGGACCCAGAATGGTATATTCCACATAAAAGATaGTTTGTTTATCAAATGAATCAAAAAGCACGCCTGAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: LSYPQDPEWYIPHKR*FVYQMNQKARLRHL
Trigger: TAAATGCCTCAGGCGTGCTTTTTGATTCATTTGATAAACAAAGCATCTTTTATGTGGAATATACCATTCTGGGTCCTGAGGATAAGAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS CCA 90 bp CAACTAGTGGTTGAGTTCAACCATATTTTTACCCTTTTCTTCATGTaGATTGAAGAGTGGACATTTACAGTTGTGCGGAGCTGTTATATT +
Preference number: 5 (lower is better)
Translates to: QLVVEFNHIFTLFFM*IEEWTFTVVRSCYI
Trigger: AATATAACAGCTCCGCACAACTGTAAATGTCCACTCTTCAATCCACATGAAGAAAAGGGTAAAAATATGGTTGAACTCAACCACTAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649353.1
CDS TCA 90 bp ATGTTTGTGCCCCCAGTTGTTATCTCTAAGGATAAGAGTAATCAATaGTCATTCAGCAGATATAGCTTATATATGGGTGGCAGTTTACAA +
Preference number: 5 (lower is better)
Translates to: MFVPPVVISKDKSNQ*SFSRYSLYMGGSLQ
Trigger: TTGTAAACTGCCACCCATATATAAGCTATATCTGCTGAATGATCATTGATTACTCTTATCCTTAGAGATAACAACTGGGGGCACAAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS GCA 90 bp ACAAAGGATTTTGTCCTCATCTCAACAATGATCAGCTATTGGAACTaGATGAAACTGAACAATTTAAACCTGGAGCTGGTAATGTTCTTA +
Preference number: 5 (lower is better)
Translates to: TKDFVLISTMISYWN*MKLNNLNLELVMFL
Trigger: TAAGAACATTACCAGCTCCAGGTTTAAATTGTTCAGTTTCATGCAGTTCCAATAGCTGATCATTGTTGAGATGAGGACAAAATCCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650366.1
CDS TCA 90 bp TTCAAGAGTCTTCCATTTATCTTAGCTTTTGGAATAAATTATCTTTaGGGTAGAAGGACAATGACGAAGCCACTTAATTCCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: FKSLPFILAFGINYL*GRRTMTKPLNSLCL
Trigger: CAGACACAAGGAATTAAGTGGCTTCGTCATTGTCCTTCTACCTCAAAGATAATTTATTCCAAAAGCTAAGATAAATGGAAGACTCTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000416330.2
ENST00000417942.5
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648829.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000666954.1
ENST00000669898.1
CDS TCA 90 bp GTAATTAATATCCCTTGCTGTAAAACAAGGAGGATAAAATGGATCTaGTCTGAAAGACATTGTTGTGATCAGTTGCCATGGTTCACATTA +
Preference number: 5 (lower is better)
Translates to: VINIPCCKTRRIKWI*SERHCCDQLPWFTL
Trigger: TAATGTGAACCATGGCAACTGATCACAACAATGTCTTTCAGATCAGATCCATTTTATCCTCCTTGTTTTACAGCAAGGGATATTAATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CAA 90 bp TCTGCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTaGCCACGGCTCACCACCATGTCCACACCAAGCAGGCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: SATCWPTIICDPFWS*PRLTTMSTPSRPGA
Trigger: TGCTCCAGGCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS GCA 72 bp GTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTTaGCACGGCTCACCACCATGTCCACACCAAGCAGGC +
Preference number: 6 (lower is better)
Translates to: VGQRSSVIHSGP*HGSPPCPHQAG
Trigger: GCCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 72 bp GCCACCTGTTGGCCAACGATCATCTGTGATCCATTCTaGTCCTTGCCACGGCTCACCACCATGTCCACACCA +
Preference number: 6 (lower is better)
Translates to: ATCWPTIICDPF*SLPRLTTMSTP
Trigger: TGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 72 bp TGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTaGGTTCTGGGTCATGGGCCTCCAGATTCCGGCCGT +
Preference number: 6 (lower is better)
Translates to: WDFPRSSSFYPS*VLGHGPPDSGR
Trigger: ACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 72 bp GTCCGAGGAGCTAGTAGGGCAAACTGCTCCCTGAGCTaGGCCGATCTTTTGACATCCCCAGCATTAGCCAAG +
Preference number: 6 (lower is better)
Translates to: VRGASRANCSLS*ADLLTSPALAK
Trigger: CTTGGCTAATGCTGGGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648970.1
ENST00000650637.1
CDS GCA 72 bp ATGGCAGCCTGGCATAAGGAACCGCTCCACAATGCTTaGTCTGATAGCCGACGTTCTGCACCTATCAGGCAG +
Preference number: 6 (lower is better)
Translates to: MAAWHKEPLHNA*SDSRRSAPIRQ
Trigger: CTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 72 bp AAAGCCTCGCCCATCATGATGTGGCCTTCCCGCCACTaGAACACTGCGACAGAACTGGATCCGCCATTTTGG +
Preference number: 6 (lower is better)
Translates to: KASPIMMWPSRH*NTATELDPPFW
Trigger: CCAAAATGGCGGATCCAGTTCTGTCGCAGTGTTCAAGTGGCGGGAAGGCCACATCATGATGGGCGAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CAA 72 bp TGTTGGCCAACGATCATCTGTGATCCATTCTGGTCCTaGCCACGGCTCACCACCATGTCCACACCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: CWPTIICDPFWS*PRLTTMSTPSR
Trigger: CCTGCTTGGTGTGGACATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CAA 90 bp TGGGACCAGGAAAGTATCTTGACAGAACCTCCTGACCTAGGGTTGTaGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGGATCCTCATGCCC +
Preference number: 6 (lower is better)
Translates to: WDQESILTEPPDLGL*PSGSELFPWRILMP
Trigger: GGGCATGAGGATCCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 72 bp TTCCTCTTCTGCCACCTGTTGGCCAACGATCATCTGTaGTCCATTCTGGTCCTTGCCACGGCTCACCACCAT +
Preference number: 6 (lower is better)
Translates to: FLFCHLLANDHL*SILVLATAHHH
Trigger: ATGGTGGTGAGCCGTGGCAAGGACCAGAATGGATCACAGATGATCGTTGGCCAACAGGTGGCAGAAGAGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000635841.2
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS TCA 72 bp GTTGGCACAGTCCACCAAATTATTTGGCCACTACTATaGGCAGGGAGTTCAGGCTGTCCCCTTGGGACCTCG +
Preference number: 6 (lower is better)
Translates to: VGTVHQIIWPLL*AGSSGCPLGTS
Trigger: CGAGGTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGGCCAAATAATTTGGTGGACTGTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429829.6
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS GCA 72 bp GCCCATCATGATGTGGCCTTCCCGCCACTTGAACACTaGGACAGAACTGGATCCGCCATTTTGGACAACCTA +
Preference number: 6 (lower is better)
Translates to: AHHDVAFPPLEH*DRTGSAILDNL
Trigger: TAGGTTGTCCAAAATGGCGGATCCAGTTCTGTCGCAGTGTTCAAGTGGCGGGAAGGCCACATCATGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS GCA 72 bp TTCTTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTaGTCCCTGAGCTGGGCCGATCTTTTGACATCCCCA +
Preference number: 6 (lower is better)
Translates to: FFTAVRGASRAN*SLSWADLLTSP
Trigger: TGGGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648970.1
ENST00000650637.1
CDS CCA 72 bp GTCCGAGGAGCTAGTAGGGCAAACTGCTCCCTGAGCTaGGCCGATCTTTTGACATCCTTCTCCGAGAAACAA +
Preference number: 6 (lower is better)
Translates to: VRGASRANCSLS*ADLLTSFSEKQ
Trigger: TTGTTTCTCGGAGAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000602863.2
ENST00000648607.1
ENST00000648927.2
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 72 bp TGGTTCCCCAAGGCTGGTACCAATGAGACTGGGGTTTaGGAATTAGTTGGTCATCATCCCTCCTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: WFPKAGTNETGV*ELVGHHPSCCP
Trigger: TGGGCAGCAGGAGGGATGATGACCAACTAATTCCCAAACCCCAGTCTCATTGGTACCAGCCTTGGGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000416330.2
ENST00000417942.5
ENST00000429829.6
ENST00000647696.1
ENST00000648829.1
ENST00000648970.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
CDS CCA 72 bp CAGAATGTCCTTGAAAACACCTGGTGTACCGCCCACTaGGAGACATACACGTGGCCCCTCCACTTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: QNVLENTWCTAH*ETYTWPLHFFL
Trigger: GAGAAAGAAGTGGAGGGGCCACGTGTATGTCTCCCAGTGGGCGGTACACCAGGTGTTTTCAAGGACATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434839.3
CDS GCA 72 bp TTCTTTACAGCTGTCCGAGGAGCTAGTAGGGCAAACTaGTCCCTGAGCTGGGCCGATCTTTTGACATCCTTC +
Preference number: 6 (lower is better)
Translates to: FFTAVRGASRAN*SLSWADLLTSF
Trigger: GAAGGATGTCAAAAGATCGGCCCAGCTCAGGGAGCAGTTTGCCCTACTAGCTCCTCGGACAGCTGTAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000602863.2
ENST00000648607.1
ENST00000648927.2
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 72 bp ACTAGCCCTAAGCCGAGTTATGCGGCAAGTCTAAAATaGCGGCCACTTTTCCTCCACAATCTGAACACGCCC +
Preference number: 6 (lower is better)
Translates to: TSPKPSYAASLK*RPLFLHNLNTP
Trigger: GGGCGTGTTCAGATTGTGGAGGAAAAGTGGCCGCCATTTTAGACTTGCCGCATAACTCGGCTTAGGGCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650637.1
CDS CCA 72 bp GTCTTCAAGCTTCTATCCTTCCTGGGTTCTGGGTCATaGGCCTCCAGATTCCGGCCGTTAGTCTTGAGATAC +
Preference number: 6 (lower is better)
Translates to: VFKLLSFLGSGS*ASRFRPLVLRY
Trigger: GTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 72 bp CAGGAAAGTATCTTGACAGAACCTCCTGACCTAGGGTaGTTGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: QESILTEPPDLG*LPSGSELFPWR
Trigger: CCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 72 bp TCTGGGTCATGGGCCTCCAGATTCCGGCCGTTAGTCTaGAGATACCTTTTTCGCTTGGGTCCTCTATCCATC +
Preference number: 6 (lower is better)
Translates to: SGSWASRFRPLV*RYLFRLGPLSI
Trigger: GATGGATAGAGGACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAATCTGGAGGCCCATGACCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 90 bp ATCTGGGACCAGGAAAGTATCTTGACAGAACCTCCTGACCTAGGGTaGTTGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGGATCCTCATG +
Preference number: 6 (lower is better)
Translates to: IWDQESILTEPPDLG*LPSGSELFPWRILM
Trigger: CATGAGGATCCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTGGTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 90 bp ATCCAACTCAGGCCTTCGGTCCAATTCAGGCCACCCTCTGTTTTCTaGGCTCTTGAGGCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATC +
Preference number: 6 (lower is better)
Translates to: IQLRPSVQFRPPSVF*ALEAFVGFRPEASI
Trigger: GATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 90 bp CTTCCATGTGTCCTGTCCCAGGTCTTAAGACTTCTAACTCAAGCCTaGAGACTTCCATCCAACTCAGGCCTTCGGTCCAATTCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: LPCVLSQVLRLLTQA*RLPSNSGLRSNSGH
Trigger: GTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGACCTGGGACAGGACACATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 72 bp GACATACACGTGGCCCCTCCACTTCTTTCTCCTGACTaGCTAAAGACAGCTGCGAAGTGCCATGCTAATTCA +
Preference number: 6 (lower is better)
Translates to: DIHVAPPLLSPD*LKTAAKCHANS
Trigger: TGAATTAGCATGGCACTTCGCAGCTGTCTTTAGCCAGTCAGGAGAAAGAAGTGGAGGGGCCACGTGTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 72 bp TCCCCCTTTGGTAGCTCTAGCACCCAGCATGGTATCTaGCACATTATAGGTGACCACAACAAGCTTAGTCCC +
Preference number: 6 (lower is better)
Translates to: SPFGSSSTQHGI*HIIGDHNKLSP
Trigger: GGGACTAAGCTTGTTGTGGTCACCTATAATGTGCCAGATACCATGCTGGGTGCTAGAGCTACCAAAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS CAA 72 bp GAAAGTATCTTGACAGAACCTCCTGACCTAGGGTTGTaGCCCAGTGGTAGTGAGCTTTTCCCCTGGAGGATC +
Preference number: 6 (lower is better)
Translates to: ESILTEPPDLGL*PSGSELFPWRI
Trigger: GATCCTCCAGGGGAAAAGCTCACTACCACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 90 bp CGGTCCAATTCAGGCCACCCTCTGTTTTCTTGGCTCTTGAGGCTTTaGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTTGGAACATGGG +
Preference number: 6 (lower is better)
Translates to: RSNSGHPLFSWLLRL*LVSGLRLLSILEHG
Trigger: CCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 90 bp TCAGGCCTTCGGTCCAATTCAGGCCACCCTCTGTTTTCTTGGCTCTaGAGGCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTTG +
Preference number: 6 (lower is better)
Translates to: SGLRSNSGHPLFSWL*RLLLVSGLRLLSIL
Trigger: CAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAGCCAAGAAAACAGAGGGTGGCCTGAATTGGACCGAAGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS TCA 72 bp TTCAGCTATCCTCAAGTGCTAGAGTGCCAGGCATGTTaGTCTTCAGGTGGGAAGGCTGACTTCCTTCAGTGT +
Preference number: 6 (lower is better)
Translates to: FSYPQVLECQAC*SSGGKADFLQC
Trigger: ACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCTAGCACTTGAGGATAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000433732.2
ENST00000434839.3
ENST00000445814.2
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 72 bp CTGCGAAGTGCCATGCTAATTCACCCAGGTCTTCGCTaGGTAGCTGGACAGTGTGTCATCAGTCTAATTCCA +
Preference number: 6 (lower is better)
Translates to: LRSAMLIHPGLR*VAGQCVISLIP
Trigger: TGGAATTAGACTGATGACACACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCACTTCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CCA 72 bp CCTTGTTTTGGTCTTGGATCATCTCACATGGCAGCCTaGCATAAGGAACCGCTCCACAATGCTTGCTCTGAT +
Preference number: 6 (lower is better)
Translates to: PCFGLGSSHMAA*HKEPLHNACSD
Trigger: ATCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGCCATGTGAGATGATCCAAGACCAAAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 72 bp GGTTTCAGGCCTGAGGCTTCTATCTATCTTGGAACATaGGCTTTCCATCTTAGTCCTCGGGTCTCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: GFRPEASIYLGT*AFHLSPRVSSL
Trigger: GAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 72 bp CAGCCAGACAATGTTGTTAAGCATATGGAGTGGGGCTaGGAGGCATGGAAACAAGCCCTGAGGAAATATGGA +
Preference number: 6 (lower is better)
Translates to: QPDNVVKHMEWG*EAWKQALRKYG
Trigger: TCCATATTTCCTCAGGGCTTGTTTCCATGCCTCCCAGCCCCACTCCATATGCTTAACAACATTGTCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS CAA 72 bp GTCCTGTCCCAGGTCTTAAGACTTCTAACTCAAGCCTaGAGACTTCCATCCAACTCAGGCCTTCGGTCCAAT +
Preference number: 6 (lower is better)
Translates to: VLSQVLRLLTQA*RLPSNSGLRSN
Trigger: ATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGACCTGGGACAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 72 bp CAGCTACAACCCTGGGCTAATCTTAGGTCGTTGGCCTaGTGTCACAAGTCTCAGTTCTTAGGCCTTCCATGT +
Preference number: 6 (lower is better)
Translates to: QLQPWANLRSLA*CHKSQFLGLPC
Trigger: ACATGGAAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACGACCTAAGATTAGCCCAGGGTTGTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000416330.2
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 72 bp GTCTTCCAGCTACAACCCTGGGCTAATCTTAGGTCGTaGGCCTTGTGTCACAAGTCTCAGTTCTTAGGCCTT +
Preference number: 6 (lower is better)
Translates to: VFQLQPWANLRS*ALCHKSQFLGL
Trigger: AAGGCCTAAGAACTGAGACTTGTGACACAAGGCCAACGACCTAAGATTAGCCCAGGGTTGTAGCTGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000416330.2
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS TCA 72 bp AGAGTGCCAGGCATGTTGATCTTCAGGTGGGAAGGCTaGCTTCCTTCAGTGTGTTCAAATTTCTTGGACCTG +
Preference number: 6 (lower is better)
Translates to: RVPGMLIFRWEG*LPSVCSNFLDL
Trigger: CAGGTCCAAGAAATTTGAACACACTGAAGGAAGTCAGCCTTCCCACCTGAAGATCAACATGCCTGGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000433732.2
ENST00000434839.3
ENST00000445814.2
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 72 bp ATAAGAGGGGACAGAGGTGGAAAGGCTAAATGTCCTTaGAAAGACCTTGAAAACACCTGGTGTACCGCCCAC +
Preference number: 6 (lower is better)
Translates to: IRGDRGGKAKCP*KDLENTWCTAH
Trigger: GTGGGCGGTACACCAGGTGTTTTCAAGGTCTTTTCAAGGACATTTAGCCTTTCCACCTCTGTCCCCTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS TCA 72 bp ATGCAGCGTGGTATCTTCAATGGGATCTGGACCCTCTaGCTTTTCTATAGGTGGCATCCCAGCATTAGCCAA +
Preference number: 6 (lower is better)
Translates to: MQRGIFNGIWTL*LFYRWHPSISQ
Trigger: TTGGCTAATGCTGGGATGCCACCTATAGAAAAGTCAGAGGGTCCAGATCCCATTGAAGATACCACGCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635841.2
CDS CCA 72 bp TGCCATGCTAATTCACCCAGGTCTTCGCTGAGTAGCTaGACAGTGTGTCATCAGTCTAATTCCATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CHANSPRSSLSS*TVCHQSNSIFC
Trigger: GCAGAAGATGGAATTAGACTGATGACACACTGTCCAGCTACTCAGCGAAGACCTGGGTGAATTAGCATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CAA 72 bp CTACTTGAGTTCTGGGTTTTACTGCAGTCTAGGGCCTaGTTTTGGTCTTGGATCATCTCACATGGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LLEFWVLLQSRA*FWSWIISHGSL
Trigger: CAGGCTGCCATGTGAGATGATCCAAGACCAAAACAAGGCCCTAGACTGCAGTAAAACCCAGAACTCAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 72 bp TTGGCTGTGATCAATTCCACCCCCATTTCTAATTGGTaGGGTTATGCAGCAATCCAGCACTGTCCATCCCAC +
Preference number: 6 (lower is better)
Translates to: LAVINSTPISNW*GYAAIQHCPSH
Trigger: GTGGGATGGACAGTGCTGGATTGCTGCATAACCCAACCAATTAGAAATGGGGGTGGAATTGATCACAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS CAA 72 bp GACATAGGTATCTCCTGTCTCTACTTTCTAGCCTGCTaGGTCTCCCTAAAGTCCTCTAATGACAAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: DIGISCLYFLAC*VSLKSSNDKPW
Trigger: CCAGGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS CAA 90 bp CTCTTGAGGCTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTaGGAACATGGGCTTTCCATCTTAGTCCTCGGGTCTCAAGTCTCA +
Preference number: 6 (lower is better)
Translates to: LLRLLLVSGLRLLSI*EHGLSILVLGSQVS
Trigger: TGAGACTTGAGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 90 bp GAAGCATTAGACATAGGTATCTCCTGTCTCTACTTTCTAGCCTGCTaGGTCTCCCTAAAGTCCTCTAATGACAAGCCCTGGCAGTACACG +
Preference number: 6 (lower is better)
Translates to: EALDIGISCLYFLAC*VSLKSSNDKPWQYT
Trigger: CGTGTACTGCCAGGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTCTAATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS TCA 72 bp CATGATGTCCACGTGACAAAAGCCATGATATACATATaGCAACGCCTGCCATATTGTCCCTGCGGCAAAACC +
Preference number: 6 (lower is better)
Translates to: HDVHVTKAMIYI*QRLPYCPCGKT
Trigger: GGTTTTGCCGCAGGGACAATATGGCAGGCGTTGTCATATGTATATCATGGCTTTTGTCACGTGGACATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS TCA 72 bp AAACCCGCCATCTTTAACAATGCGGCAAGCCCGCCATaGTGTCCACGTGACAAAAGCCATGATATACATATG +
Preference number: 6 (lower is better)
Translates to: KPAIFNNAASPP*CPRDKSHDIHM
Trigger: CATATGTATATCATGGCTTTTGTCACGTGGACATCATGGCGGGCTTGCCGCATTGTTAAAGATGGCGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS GCA 72 bp TTCCACCTTCTGCCCTACTTGAGTTCTGGGTTTTACTaGAGTCTAGGGCCTTGTTTTGGTCTTGGATCATCT +
Preference number: 6 (lower is better)
Translates to: FHLLPYLSSGFY*SLGPCFGLGSS
Trigger: AGATGATCCAAGACCAAAACAAGGCCCTAGACTGCAGTAAAACCCAGAACTCAAGTAGGGCAGAAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 72 bp TGCCAGAAACTTGTAAATGCACTTCAAAACCAATTGTaGCTCAAGTGTAGGTGGTTCCCCAAGGCTGGTACC +
Preference number: 6 (lower is better)
Translates to: CQKLVNALQNQL*LKCRWFPKAGT
Trigger: GGTACCAGCCTTGGGGAACCACCTACACTTGAGCCACAATTGGTTTTGAAGTGCATTTACAAGTTTCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416330.2
ENST00000417942.5
ENST00000647696.1
ENST00000648829.1
ENST00000650627.1
CDS CCA 72 bp TCTGCACTCGTTAGCAACATCCCACAGAAGGTGGGATaGGGTGAGAATCCATTTTTATTGCACAGAACCATG +
Preference number: 6 (lower is better)
Translates to: SALVSNIPQKVG*GENPFLLHRTM
Trigger: CATGGTTCTGTGCAATAAAAATGGATTCTCACCCCATCCCACCTTCTGTGGGATGTTGCTAACGAGTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CCA 72 bp ACACTGCACCAACACACCAAAGTGGTAGGGAGATCTTaGACTGATGGGCTGAAAAATGGGACAATCAGTACT +
Preference number: 6 (lower is better)
Translates to: TLHQHTKVVGRS*TDGLKNGTIST
Trigger: AGTACTGATTGTCCCATTTTTCAGCCCATCAGTCCAAGATCTCCCTACCACTTTGGTGTGTTGGTGCAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 72 bp AGACTTTATCTTCCTATCTGGGACCAGGAAAGTATCTaGACAGAACCTCCTGACCTAGGGTTGTTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: RLYLPIWDQESI*TEPPDLGLLPS
Trigger: ACTGGGCAACAACCCTAGGTCAGGAGGTTCTGTCAAGATACTTTCCTGGTCCCAGATAGGAAGATAAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 72 bp CTTTTGTTGGTTTCAGGCCTGAGGCTTCTATCTATCTaGGAACATGGGCTTTCCATCTTAGTCCTCGGGTCT +
Preference number: 6 (lower is better)
Translates to: LLLVSGLRLLSI*EHGLSILVLGS
Trigger: AGACCCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAAGCCTCAGGCCTGAAACCAACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 72 bp AGGATTGTGCACATAAACTGTCCTAGTACAGAGGTCTaGAGTAGTAAGGGTCCCCTGCTGGAATACAAAGGG +
Preference number: 6 (lower is better)
Translates to: RIVHINCPSTEV*SSKGPLLEYKG
Trigger: CCCTTTGTATTCCAGCAGGGGACCCTTACTACTCAAGACCTCTGTACTAGGACAGTTTATGTGCACAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS TCA 72 bp AAGGAGAAACTAATGCTTTCTCAACCAAGAGAGCCATaGAGCCACACAGAAAAGGTCGGATGTGGTCTAACC +
Preference number: 6 (lower is better)
Translates to: KEKLMLSQPREP*SHTEKVGCGLT
Trigger: GGTTAGACCACATCCGACCTTTTCTGTGTGGCTTCATGGCTCTCTTGGTTGAGAAAGCATTAGTTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649353.1
CDS GCA 72 bp TTAGACATAGGTATCTCCTGTCTCTACTTTCTAGCCTaGTTGGTCTCCCTAAAGTCCTCTAATGACAAGCCC +
Preference number: 6 (lower is better)
Translates to: LDIGISCLYFLA*LVSLKSSNDKP
Trigger: GGGCTTGTCATTAGAGGACTTTAGGGAGACCAAGCAGGCTAGAAAGTAGAGACAGGAGATACCTATGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS CCA 72 bp CATGCCCCATCTCCACCTAGGGATCGTCAAAGGGAATaGATCACTAACACTGTAAAACAACAAGCCTATTCT +
Preference number: 6 (lower is better)
Translates to: HAPSPPRDRQRE*ITNTVKQQAYS
Trigger: AGAATAGGCTTGTTGTTTTACAGTGTTAGTGATCCATTCCCTTTGACGATCCCTAGGTGGAGATGGGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000602863.2
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650548.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 72 bp CCATCTCCTCAATCAGGCCAGGAAGCATGTATCTTCTaGACAGGACTTTATCTCTCTACTCAGCTTAGTACA +
Preference number: 6 (lower is better)
Translates to: PSPQSGQEACIF*TGLYLSTQLST
Trigger: TGTACTAAGCTGAGTAGAGAGATAAAGTCCTGTCCAGAAGATACATGCTTCCTGGCCTGATTGAGGAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS CAA 72 bp GCCATGGTTCACATTAACTATCCTAGTGCAAAGGTCTaGACTAGAGGTCATCCACTGCTGAACACTAGGGAA +
Preference number: 6 (lower is better)
Translates to: AMVHINYPSAKV*TRGHPLLNTRE
Trigger: TTCCCTAGTGTTCAGCAGTGGATGACCTCTAGTCAAGACCTTTGCACTAGGATAGTTAATGTGAACCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CAA 90 bp GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTGACGTGTGGTGGTTGTTT +
Preference number: 6 (lower is better)
Translates to: AEDSALCTACRKYND*ADRNNEELDVWWLF
Trigger: AAACAACCACCACACGTCAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 90 bp GCTGGGGAGGAACTGGATGCTAGGCAGGCAGGATACAACGAAAAATaGAAATACTCCAATATAATAAGTCTGAATAGAGGACACCAGACC +
Preference number: 6 (lower is better)
Translates to: AGEELDARQAGYNEK*KYSNIISLNRGHQT
Trigger: GGTCTGGTGTCCTCTATTCAGACTTATTATATTGGAGTATTTCAATTTTTCGTTGTATCCTGCCTGCCTAGCATCCAGTTCCTCCCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CAA 90 bp GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTTTTCTCCAGATAGCTGGC +
Preference number: 6 (lower is better)
Translates to: AEDSALCTACRKYND*ADRNNEELFLQIAG
Trigger: GCCAGCTATCTGGAGAAAAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650366.1
CDS TCA 72 bp TTACCTAATAGCTGCAAATATGGACACCTGAGATTGTaGGCAATAGTCTGTAAAAAGGGGCCAAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: LPNSCKYGHLRL*AIVCKKGPRAH
Trigger: GTGTGCCCTTGGCCCCTTTTTACAGACTATTGCTCACAATCTCAGGTGTCCATATTTGCAGCTATTAGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 72 bp CACAAAATAAAGGATGGCAATCCAGCTCCCTGGGTCTaGCTTGCCTTCAGTATTTTGCACAGTAAAGCAGTA +
Preference number: 6 (lower is better)
Translates to: HKIKDGNPAPWV*LAFSILHSKAV
Trigger: TACTGCTTTACTGTGCAAAATACTGAAGGCAAGTCAGACCCAGGGAGCTGGATTGCCATCCTTTATTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS GCA 72 bp AGCCCCAAATCAATTCATTCAGATAGGTTTAGCTCATaGAATGCACATGACTTCCTCTGCCTGACCTGCTAT +
Preference number: 6 (lower is better)
Translates to: SPKSIHSDRFSS*NAHDFLCLTCY
Trigger: ATAGCAGGTCAGGCAGAGGAAGTCATGTGCATTGCATGAGCTAAACCTATCTGAATGAATTGATTTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650637.1
CDS GCA 72 bp AGGGGCTCTAAGAATGAGTCAGTCCCACTGCTGTTATaGAAAGATGTTTGCAAAGGCCATAGTGTAACTAAC +
Preference number: 6 (lower is better)
Translates to: RGSKNESVPLLL*KDVCKGHSVTN
Trigger: GTTAGTTACACTATGGCCTTTGCAAACATCTTTGCATAACAGCAGTGGGACTGACTCATTCTTAGAGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS GCA 72 bp TTGCCAACCTTCGCAAATAGCCAAACACAATGGCTATaGTCTATCCCTTTCATCTCTTTCCATGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: LPTFANSQTQWL*SIPFISFHGSK
Trigger: TTTGGAGCCATGGAAAGAGATGAAAGGGATAGAGCATAGCCATTGTGTTTGGCTATTTGCGAAGGTTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS CCA 72 bp CCTGTTGCTGAAAATACTTCAAGATTCAAGGTGGTGTaGCAACTGCTACTACTGCTTAGAGGTGCAATTGTC +
Preference number: 6 (lower is better)
Translates to: PVAENTSRFKVV*QLLLLLRGAIV
Trigger: GACAATTGCACCTCTAAGCAGTAGTAGCAGTTGCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS CCA 72 bp GTCATCCTGTTGCTGAAAATACTTCAAGATTCAAGGTaGTGTGGCAACTGCTACTACTGCTTAGAGGTGCAA +
Preference number: 6 (lower is better)
Translates to: VILLLKILQDSR*CGNCYYCLEVQ
Trigger: TTGCACCTCTAAGCAGTAGTAGCAGTTGCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS CAA 72 bp TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTGACGTGTGG +
Preference number: 6 (lower is better)
Translates to: SALCTACRKYND*ADRNNEELDVW
Trigger: CCACACGTCAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 72 bp CAAAACAACAGGACTTTGGTTGATCAGGACACCCTGTaGTACTACAAAGGAAAGGTGATGGGGTATGACCTT +
Preference number: 6 (lower is better)
Translates to: QNNRTLVDQDTL*YYKGKVMGYDL
Trigger: AAGGTCATACCCCATCACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS CAA 72 bp GCGCAATGCAAAAGGGTTGGGAGTATGGACCACTGTTaGATAGACAAGTGCATGGAATACTCCAATGCTTAT +
Preference number: 6 (lower is better)
Translates to: AQCKRVGSMDHC*IDKCMEYSNAY
Trigger: ATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGGTCCATACTCCCAACCCTTTTGCATTGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 72 bp GGGCTGACACTAAATTTGTGGCTAATGGTCATCCTGTaGCTGAAAATACTTCAAGATTCAAGGTGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: GLTLNLWLMVIL*LKILQDSRWCG
Trigger: GCCACACCACCTTGAATCTTGAAGTATTTTCAGCAACAGGATGACCATTAGCCACAAATTTAGTGTCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602495.1
CDS CAA 90 bp ATTAACTGTTCAAATGTAAAGATCATAAGGAGTGGGCACCCACTATaGAAAAGAGGTGGGGCATCCTTGTCTAGGGCACAAGAACCAACA +
Preference number: 6 (lower is better)
Translates to: INCSNVKIIRSGHPL*KRGGASLSRAQEPT
Trigger: TGTTGGTTCTTGTGCCCTAGACAAGGATGCCCCACCTCTTTTCAATAGTGGGTGCCCACTCCTTATGATCTTTACATTTGAACAGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS CAA 90 bp AGAAGTGTAAACAATAGAAAAGAGGTAGGGTTTAGGGTTCTCATCTaGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTCCTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: RSVNNRKEVGFRVLI*GFPQVFKLLSFLGS
Trigger: AGAACCCAGGAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGTTTACACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS TCA 72 bp TACAGGAACATGCTTAGAGAATTGAGTTTGTGCACATaGACATTCCAAGTGACAGTCTTGAGTAGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: YRNMLRELSLCT*TFQVTVLSSGH
Trigger: GTGCCCACTACTCAAGACTGTCACTTGGAATGTTCATGTGCACAAACTCAATTCTCTAAGCATGTTCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS TCA 72 bp TTCATGTATAATGGGTGGGACCAAGGAAAGTGCAACTaGGAATTGTTTAAGTCCAAGAGAAAGGGCCTTGTC +
Preference number: 6 (lower is better)
Translates to: FMYNGWDQGKCN*ELFKSKRKGLV
Trigger: GACAAGGCCCTTTCTCTTGGACTTAAACAATTCTCAGTTGCACTTTCCTTGGTCCCACCCATTATACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS TCA 72 bp TCAAACCAAAGATGTTCTTCTATCTTCAGCTGTCAGTaGTCTAATGCCCTCATCTCTCTTATCCTCAGGACC +
Preference number: 6 (lower is better)
Translates to: SNQRCSSIFSCQ*SNALISLILRT
Trigger: GGTCCTGAGGATAAGAGAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAAGAACATCTTTGGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS CCA 72 bp AATAATCTGCACTCGTTAGCAACATCCCACAGAAGGTaGGATGGGGTGAGAATCCATTTTTATTGCACAGAA +
Preference number: 6 (lower is better)
Translates to: NNLHSLATSHRR*DGVRIHFYCTE
Trigger: TTCTGTGCAATAAAAATGGATTCTCACCCCATCCCACCTTCTGTGGGATGTTGCTAACGAGTGCAGATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CCA 72 bp CTTAGTGAATATCATCCCCCTGCTCTAAAGCAAAGGTaGTACAGGAACATGCTTAGAGAATTGAGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: LSEYHPPALKQR*YRNMLRELSLC
Trigger: GCACAAACTCAATTCTCTAAGCATGTTCCTGTACCACCTTTGCTTTAGAGCAGGGGGATGATATTCACTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS CCA 72 bp CAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTCTCACTTGTTG +
Preference number: 6 (lower is better)
Translates to: QLSALLVGSIMI*QIGTMKSSHLL
Trigger: CAACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648091.1
ENST00000648829.1
ENST00000648927.2
CDS CCA 72 bp TTCTGTAAGGCTTTAAGAGAGACTTTGGGGACCACATaGAACAGAATGATTTGCCCATGTGATCAATGTCAC +
Preference number: 6 (lower is better)
Translates to: FCKALRETLGTT*NRMICPCDQCH
Trigger: GTGACATTGATCACATGGGCAAATCATTCTGTTCCATGTGGTCCCCAAAGTCTCTCTTAAAGCCTTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648927.2
CDS CAA 72 bp AGGAACAATGAAGAGCTTGACGTGTGGTGGTTGTTTTaGAGACTTTATCTTCCTATCTGGGACCAGGAAAGT +
Preference number: 6 (lower is better)
Translates to: RNNEELDVWWLF*RLYLPIWDQES
Trigger: ACTTTCCTGGTCCCAGATAGGAAGATAAAGTCTCAAAAACAACCACCACACGTCAAGCTCTTCATTGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000650186.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 72 bp AACAATAGAAAAGAGGTAGGGTTTAGGGTTCTCATCTaGGGATTTCCCCAGGTCTTCAAGCTTCTATCCTTC +
Preference number: 6 (lower is better)
Translates to: NNRKEVGFRVLI*GFPQVFKLLSF
Trigger: GAAGGATAGAAGCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAACCCTACCTCTTTTCTATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CAA 72 bp CAGAAGAAGCCCAAGCTCCATGTATCAGTACTCAATTaGGAAAGGTCAAGGAAGAGCTATCAAGTAAAGCCT +
Preference number: 6 (lower is better)
Translates to: QKKPKLHVSVLN*ERSRKSYQVKP
Trigger: AGGCTTTACTTGATAGCTCTTCCTTGACCTTTCCAAATTGAGTACTGATACATGGAGCTTGGGCTTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647696.1
ENST00000647913.2
CDS CAA 90 bp TTAACAGTCCAAAACAACAGGACTTTGGTTGATCAGGACACCCTGTaGTACTACAAAGGAAAGGTGATGGGGTATGACCTTAATCTACTG +
Preference number: 6 (lower is better)
Translates to: LTVQNNRTLVDQDTL*YYKGKVMGYDLNLL
Trigger: CAGTAGATTAAGGTCATACCCCATCACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTGGACTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS TCA 72 bp CATCAGTCTAATTCCATCTTCTGCTCTAATTGGCTGTaGTCAATTCCACCCCCATTTCTAATTGGTTGGGTT +
Preference number: 6 (lower is better)
Translates to: HQSNSIFCSNWL*SIPPPFLIGWV
Trigger: AACCCAACCAATTAGAAATGGGGGTGGAATTGATCACAGCCAATTAGAGCAGAAGATGGAATTAGACTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650627.1
ENST00000650637.1
CDS TCA 72 bp AAAGAGGGTGTGATAGGTCAGAAACCCAAGTCTAATTaGAGGACCATTGACAACTGCAATTACATGCCATCT +
Preference number: 6 (lower is better)
Translates to: KEGVIGQKPKSN*RTIDNCNYMPS
Trigger: AGATGGCATGTAATTGCAGTTGTCAATGGTCCTTCAATTAGACTTGGGTTTCTGACCTATCACACCCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429829.6
ENST00000650186.1
ENST00000650627.1
CDS TCA 72 bp GCACATATTAACAGTCCAAAACAACAGGACTTTGGTTaGTCAGGACACCCTGTTGTACTACAAAGGAAAGGT +
Preference number: 6 (lower is better)
Translates to: AHINSPKQQDFG*SGHPVVLQRKG
Trigger: ACCTTTCCTTTGTAGTACAACAGGGTGTCCTGATCAACCAAAGTCCTGTTGTTTTGGACTGTTAATATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS GCA 72 bp TTCAAATTTCTTGGACCTGCTGAAGACTCAGCTCTCTaGACTGCTTGTAGGAAGTATAATGATTTGGCAGAT +
Preference number: 6 (lower is better)
Translates to: FKFLGPAEDSAL*TACRKYNDLAD
Trigger: ATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGCAGGTCCAAGAAATTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000421322.3
ENST00000429829.6
ENST00000433732.2
ENST00000434839.3
ENST00000445814.2
ENST00000602495.1
ENST00000602587.5
ENST00000635841.2
ENST00000647696.1
ENST00000647913.2
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649353.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 72 bp TCAGTACTGTGTTTATTAATAACACAGAAGGGGCTTTaGGTAGTCAGCATACTCAGAAGCAATGCGAAAGGA +
Preference number: 6 (lower is better)
Translates to: SVLCLLITQKGL*VVSILRSNAKG
Trigger: TCCTTTCGCATTGCTTCTGAGTATGCTGACTACCCAAAGCCCCTTCTGTGTTATTAATAAACACAGTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000665247.1
ENST00000666309.1
ENST00000669898.1
CDS CCA 72 bp ATAGGTAAAAGCTGTGATTTAAAGCTGGCTCAAGACTaGCCCAGGCATAATACTGTCAATCTAAAGGTAACC +
Preference number: 6 (lower is better)
Translates to: IGKSCDLKLAQD*PRHNTVNLKVT
Trigger: GGTTACCTTTAGATTGACAGTATTATGCCTGGGCCAGTCTTGAGCCAGCTTTAAATCACAGCTTTTACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS CCA 72 bp ACATCATTACTCTTTGCCATCCAAACTGATAAGGTTTaGGGGAAGAGAAGAGGCATTAGCTCAGTTCAGATA +
Preference number: 6 (lower is better)
Translates to: TSLLFAIQTDKV*GKRRGISSVQI
Trigger: TATCTGAACTGAGCTAATGCCTCTTCTCTTCCCCCAAACCTTATCAGTTTGGATGGCAAAGAGTAATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS CCA 72 bp CAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCTTTTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: QLSALLVGSIMI*QIGTMKSFFSR
Trigger: TCTGGAGAAAAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650366.1
CDS CAA 72 bp ACAGAGTCCCTTTCTAATGGACAGGACTCTGGACAATaGCAACTGTGCAAATTAACTGTTCAAGAGCTGTTA +
Preference number: 6 (lower is better)
Translates to: TESLSNGQDSGQ*QLCKLTVQELL
Trigger: TAACAGCTCTTGAACAGTTAATTTGCACAGTTGCAATTGTCCAGAGTCCTGTCCATTAGAAAGGGACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CAA 72 bp TTTCAATTATATGTTGATAGTCCACCAGAAGGGGCCTaGGAGGGAAACAGTATACCCCACAGTAATGCAAAA +
Preference number: 6 (lower is better)
Translates to: FQLYVDSPPEGA*EGNSIPHSNAK
Trigger: TTTTGCATTACTGTGGGGTATACTGTTTCCCTCCAAGGCCCCTTCTGGTGGACTATCAACATATAATTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS CAA 72 bp GTATCTACGATATGCATTATCCATGGTCATCTGTTCTaGGGCAGAAATGTAGTAAAATTGTGGAAGGAGCCG +
Preference number: 6 (lower is better)
Translates to: VSTICIIHGHLF*GRNVVKLWKEP
Trigger: CGGCTCCTTCCACAATTTTACTACATTTCTGCCCAAGAACAGATGACCATGGATAATGCATATCGTAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS CAA 72 bp TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTCTCACTTGTT +
Preference number: 6 (lower is better)
Translates to: SALCTACRKYND*ADRNNEELSLV
Trigger: AACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648091.1
ENST00000648829.1
ENST00000648927.2
CDS CAA 72 bp TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTTTTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: SALCTACRKYND*ADRNNEELFLQ
Trigger: CTGGAGAAAAAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650366.1
CDS CAA 90 bp GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCAAATATCACTTGATGAGTCA +
Preference number: 6 (lower is better)
Translates to: AEDSALCTACRKYND*ADRNNEEQISLDES
Trigger: TGACTCATCAAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433732.2
CDS CAA 90 bp TATAAGATGCAGAAGAAGCCCAAGCTCCATGTATCAGTACTCAATTaGGAAAGGTCAAGGAAGAGCTATCAAGTAAAGCCTAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: YKMQKKPKLHVSVLN*ERSRKSYQVKPKSP
Trigger: TGGTGACTTAGGCTTTACTTGATAGCTCTTCCTTGACCTTTCCAAATTGAGTACTGATACATGGAGCTTGGGCTTCTTCTGCATCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647696.1
ENST00000647913.2
CDS CAA 90 bp GCTGAAGACTCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCTCTCACTTGTTGTATTATAC +
Preference number: 6 (lower is better)
Translates to: AEDSALCTACRKYND*ADRNNEELSLVVLY
Trigger: GTATAATACAACAAGTGAGAGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGAGTCTTCAGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648091.1
ENST00000648927.2
CDS TCA 72 bp TTAGGTAACCAGCACCCTCTTGATGTAAAGCAAAGATaGTGCAGGGACCTTGATATAAAAGACTCAGTTCTA +
Preference number: 6 (lower is better)
Translates to: LGNQHPLDVKQR*CRDLDIKDSVL
Trigger: TAGAACTGAGTCTTTTATATCAAGGTCCCTGCATCATCTTTGCTTTACATCAAGAGGGTGCTGGTTACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS TCA 72 bp ATCCCTTGCTGTAAAACAAGGAGGATAAAATGGATCTaGTCTGAAAGACATTGTTGTGATCAGTTGCCATGG +
Preference number: 6 (lower is better)
Translates to: IPCCKTRRIKWI*SERHCCDQLPW
Trigger: CCATGGCAACTGATCACAACAATGTCTTTCAGATCAGATCCATTTTATCCTCCTTGTTTTACAGCAAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS GCA 72 bp GGACAGGACTTTATCTCTCTACTCAGCTTAGTACACTaGCTTATATTAGTCCATTTGTCCCATGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: GQDFISLLSLVH*LILVHLSHVFI
Trigger: GATGAAAACATGGGACAAATGGACTAATATAAGGCAGTGTACTAAGCTGAGTAGAGAGATAAAGTCCTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS GCA 72 bp TTCTTATACGCACTTGATTATGTAATAAGAGGGTATTaGTTGGGTCTACTGCATAACCTCTCATGTTTCCGG +
Preference number: 6 (lower is better)
Translates to: FLYALDYVIRGY*LGLLHNLSCFR
Trigger: CCGGAAACATGAGAGGTTATGCAGTAGACCCAAGCAATACCCTCTTATTACATAATCAAGTGCGTATAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647696.1
ENST00000647913.2
CDS CCA 72 bp CAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTTaGCAGATAGGAACAATGAAGAGCAAATATCACTTG +
Preference number: 6 (lower is better)
Translates to: QLSALLVGSIMI*QIGTMKSKYHL
Trigger: CAAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433732.2
CDS CCA 72 bp TTTCATCATGAAGCATTACTTGGGTTTGAGAAACAATaGCACAGACCATGTTTCCAAGAAGGTTCAAGACCA +
Preference number: 6 (lower is better)
Translates to: FHHEALLGFEKQ*HRPCFQEGSRP
Trigger: TGGTCTTGAACCTTCTTGGAAACATGGTCTGTGCCATTGTTTCTCAAACCCAAGTAATGCTTCATGATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS CCA 72 bp TCTCCAGTCTTTATTACTGAGCGATCCTCTACAATGTaGGTTGTTAATACCCTTGTGTTCTCAGCACAAAAT +
Preference number: 6 (lower is better)
Translates to: SPVFITERSSTM*VVNTLVFSAQN
Trigger: ATTTTGTGCTGAGAACACAAGGGTATTAACAACCCACATTGTAGAGGATCGCTCAGTAATAAAGACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649353.1
CDS CAA 72 bp TTATACGCACTTGATTATGTAATAAGAGGGTATTGCTaGGGTCTACTGCATAACCTCTCATGTTTCCGGGAA +
Preference number: 6 (lower is better)
Translates to: LYALDYVIRGYC*GLLHNLSCFRE
Trigger: TTCCCGGAAACATGAGAGGTTATGCAGTAGACCCAAGCAATACCCTCTTATTACATAATCAAGTGCGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647696.1
ENST00000647913.2
CDS CAA 90 bp ACTGCAATTACATGCCATCTACAGTTCGAAGAGAAGGGCTTAATATaGATTAGCACTCTCTGCTTTGATAAGTACAGGAGTCCTGATAAA +
Preference number: 6 (lower is better)
Translates to: TAITCHLQFEEKGLI*ISTLCFDKYRSPDK
Trigger: TTTATCAGGACTCCTGTACTTATCAAAGCAGAGAGTGCTAATCAATATTAAGCCCTTCTCTTCGAACTGTAGATGGCATGTAATTGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS TCA 72 bp GATGGCTTAAGATTACTTTCTGGTGGTCACCCATGCTaGACAATATTTTTCAATCTTCCAAACAGCAAAGAC +
Preference number: 6 (lower is better)
Translates to: DGLRLLSGGHPC*TIFFNLPNSKD
Trigger: GTCTTTGCTGTTTGGAAGATTGAAAAATATTGTTCAGCATGGGTGACCACCAGAAAGTAATCTTAAGCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000416330.2
ENST00000417942.5
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648829.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000666954.1
ENST00000669898.1
CDS TCA 72 bp CTGAAATACAGTATCACCTATATGAATGTCTGCTCCTaGGGGAAGTTAACAAAAGCCAGATTAGATACTGAC +
Preference number: 6 (lower is better)
Translates to: LKYSITYMNVCS*GKLTKARLDTD
Trigger: GTCAGTATCTAATCTGGCTTTTGTTAACTTCCCTCAGGAGCAGACATTCATATAGGTGATACTGTATTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000429829.6
ENST00000434839.3
ENST00000635841.2
ENST00000647696.1
ENST00000648091.1
ENST00000648607.1
ENST00000648829.1
ENST00000648927.2
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650186.1
ENST00000650366.1
ENST00000650548.1
ENST00000650627.1
ENST00000650637.1
ENST00000669898.1
CDS TCA 72 bp CCCCCAGTTGTTATCTCTAAGGATAAGAGTAATCAATaGTCATTCAGCAGATATAGCTTATATATGGGTGGC +
Preference number: 6 (lower is better)
Translates to: PPVVISKDKSNQ*SFSRYSLYMGG
Trigger: GCCACCCATATATAAGCTATATCTGCTGAATGATCATTGATTACTCTTATCCTTAGAGATAACAACTGGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS GCA 72 bp CCACTGTTTGATAGACAAGTGCATGGAATACTCCAATaGTTATACTTTATTATGCCATGGGAAACTAAGGGT +
Preference number: 6 (lower is better)
Translates to: PLFDRQVHGILQ*LYFIMPWETKG
Trigger: ACCCTTAGTTTCCCATGGCATAATAAAGTATAAGCATTGGAGTATTCCATGCACTTGTCTATCAAACAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS CAA 72 bp TTGCAACTGTGCAAATTAACTGTTCAAGAGCTGTTATaGAATAATCTGCACTCGTTAGCAACATCCCACAGA +
Preference number: 6 (lower is better)
Translates to: LQLCKLTVQELL*NNLHSLATSHR
Trigger: TCTGTGGGATGTTGCTAACGAGTGCAGATTATTCAATAACAGCTCTTGAACAGTTAATTTGCACAGTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CAA 72 bp TCAGCTCTCTGCACTGCTTGTAGGAAGTATAATGATTaGGCAGATAGGAACAATGAAGAGCAAATATCACTT +
Preference number: 6 (lower is better)
Translates to: SALCTACRKYND*ADRNNEEQISL
Trigger: AAGTGATATTTGCTCTTCATTGTTCCTATCTGCCAAATCATTATACTTCCTACAAGCAGTGCAGAGAGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433732.2
CDS CAA 72 bp TTTAGAAGGTGTTTCATCATGAAGCATTACTTGGGTTaGAGAAACAATGGCACAGACCATGTTTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: FRRCFIMKHYLG*RNNGTDHVSKK
Trigger: CTTCTTGGAAACATGGTCTGTGCCATTGTTTCTCAAACCCAAGTAATGCTTCATGATGAAACACCTTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647913.2
CDS GCA 72 bp TCCCTCATTTCCAAGAGAAATTTAGAACTGAGTAATTaGCAATATTCCCATGCTGCATTTTATTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: SLISKRNLELSN*QYSHAAFYSPV
Trigger: GACTGGAGAATAAAATGCAGCATGGGAATATTGGCAATTACTCAGTTCTAAATTTCTCTTGGAAATGAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649353.1
CDS CCA 72 bp ATTGTGACATCTAGATGGCTTAAGATTACTTTCTGGTaGTCACCCATGCTGAACAATATTTTTCAATCTTCC +
Preference number: 6 (lower is better)
Translates to: IVTSRWLKITFW*SPMLNNIFQSS
Trigger: GGAAGATTGAAAAATATTGTTCAGCATGGGTGACCACCAGAAAGTAATCTTAAGCCATCTAGATGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000416330.2
ENST00000417942.5
ENST00000421322.3
ENST00000429829.6
ENST00000434839.3
ENST00000647696.1
ENST00000647913.2
ENST00000648607.1
ENST00000648829.1
ENST00000650366.1
ENST00000650627.1
ENST00000666954.1
ENST00000669898.1
CDS CCA 72 bp GAATGCAAATGGGGTTCAGAGTGCTGTCTAATCCAATaGGTAGGATTATTGGCAATTAGAATTTTACTCAAT +
Preference number: 6 (lower is better)
Translates to: ECKWGSECCLIQ*VGLLAIRILLN
Trigger: ATTGAGTAAAATTCTAATTGCCAATAATCCTACCCATTGGATTAGACAGCACTCTGAACCCCATTTGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CAA 90 bp AACGGAATATCCCAGTATAATAGGATAAGCAATGGACAACTTATTTaGAGCACTGAATCAATGAAAATTAGAGTGACTTTCGAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: NGISQYNRISNGQLI*STESMKIRVTFERS
Trigger: GCTTCTCTCGAAAGTCACTCTAATTTTCATTGATTCAGTGCTCAAAATAAGTTGTCCATTGCTTATCCTATTATACTGGGATATTCCGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429829.6
ENST00000650627.1
CDS CAA 90 bp TTGTTCCTGTGTTTCCACCATAAGATAAATGAGATAAAGTGCACTTaGGTTTACGTCTTTCAAGCACTTAAGAACAGCACTTTATTCAGT +
Preference number: 6 (lower is better)
Translates to: LFLCFHHKINEIKCT*VYVFQALKNSTLFS
Trigger: ACTGAATAAAGTGCTGTTCTTAAGTGCTTGAAAGACGTAAACCAAAGTGCACTTTATCTCATTTATCTTATGGTGGAAACACAGGAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000650366.1
CDS TCA 72 bp TTATTAATGCTATTAATTGTCCAAGAGCTGAGATTATaGGTAGTTAACACTTCTCAGCAGCAATCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: LLMLLIVQELRL*VVNTSQQQSKG
Trigger: CCCTTTGGATTGCTGCTGAGAAGTGTTAACTACTCATAATCTCAGCTCTTGGACAATTAATAGCATTAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
ENST00000669898.1
CDS GCA 72 bp CTCTGTTGTAGGTTCAATAATGATAATAAATGTTTGTaGCCCCAGTTGTTATCTCTAAGGATAAGAGTAATC +
Preference number: 6 (lower is better)
Translates to: LCCRFNNDNKCL*PQLLSLRIRVI
Trigger: GATTACTCTTATCCTTAGAGATAACAACTGGGGGCACAAACATTTATTATCATTATTGAACCTACAACAGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1
CDS GCA 72 bp GTTCCAGATTTTTCTACAGTACGTACCATCATTGTTTaGAGATCTGATCTAAAGACTTACTCTCTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: VPDFSTVRTIIV*RSDLKTYSLSF
Trigger: AAAAGAAAGAGAGTAAGTCTTTAGATCAGATCTGCAAACAATGATGGTACGTACTGTAGAAAAATCTGGAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647696.1
ENST00000647913.2
CDS CCA 72 bp AAAAGAGGTATAATGGTCCTAGAAGTGATAGGGTTGTaGACAACTGCAATTATTCACATTAACTGTTCAAAT +
Preference number: 6 (lower is better)
Translates to: KRGIMVLEVIGL*TTAIIHINCSN
Trigger: ATTTGAACAGTTAATGTGAATAATTGCAGTTGTCCACAACCCTATCACTTCTAGGACCATTATACCTCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000429829.6
ENST00000648607.1
ENST00000648991.1
ENST00000650186.1
ENST00000650366.1
ENST00000650627.1
ENST00000666309.1
CDS CAA 72 bp AACTACTATAGTGGCATTCTTCAGACAACCAATCCCTaGCGTATGCGTATTCAAAAGATAATCATTGTTATT +
Preference number: 6 (lower is better)
Translates to: NYYSGILQTTNP*RMRIQKIIIVI
Trigger: AATAACAATGATTATCTTTTGAATACGCATACGCAAGGGATTGGTTGTCTGAAGAATGCCACTATAGTAGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000429829.6
ENST00000648970.1
ENST00000648991.1
ENST00000649757.1
ENST00000650366.1