RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XIRP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163092

Ensembl transcript IDs: ENST00000295237.10, ENST00000409043.5, ENST00000409195.6, ENST00000409273.6, ENST00000409605.1, ENST00000409728.5, ENST00000628543.2, ENST00000672277.1, ENST00000672671.1, ENST00000672716.1

Found 1824 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTTTACCATAAGGCCTCTGCTGAGGCTTGGTTTTGGAGCAGGCTaGACAGGACTGCCAGCAGCTGCTCTGTCAGTCTGTTTCTTCAGA +
Preference number: 1 (lower is better)
Translates to: PFTIRPLLRLGFGAG*TGLPAAALSVCFFR
Trigger: TCTGAAGAAACAGACTGACAGAGCAGCTGCTGGCAGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGCCTTATGGTAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR GCA 90 bp AAACCTGTGTTTTCATTATTGCGGGCAGCTTCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCAT +
Preference number: 1 (lower is better)
Translates to: KPVFSLLRAASVVST*QGLTSFPNSLKSKH
Trigger: ATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCAATAATGAAAACACAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGTTTTGGAGCAGGCTaGACAGGACTGCCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGFGAG*TGLPAA
Trigger: AGCTGCTGGCAGTCCTGTGCAGCCTGCTCCAAAACC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGCTGAGGCTTGGTTTTaGAGCAGGCTGCACAGGACT +
Preference number: 2 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWAEAWF*SRLHRT
Trigger: AGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCAGGCTGCACAGGACTaGCAGCAGCTGCTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFQAAQD*QQLLCQ
Trigger: CTGACAGAGCAGCTGCTGGCAGTCCTGTGCAGCCTG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCAGGCTGCACAGGACTaGCAGCAGCTGCTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGQAAQD*QQLLCQ
Trigger: CTGACAGAGCAGCTGCTGGCAGTCCTGTGCAGCCTG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAGGACTGCCAGCAGCTaGTCTGTCAGTCTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVRTASS*SVSLFL
Trigger: AAGAAACAGACTGACAGAGCAGCTGCTGGCAGTCCT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCTGACAAACATGGGTaGACTGTAGATAAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSDKHG*TVDKAA
Trigger: TGCAGCCTTATCTACAGTCCACCCATGTTTGTCAGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGCTGAGGCTTGGTTTTaGAGCAGGCTGCACAGGACT +
Preference number: 2 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFAEAWF*SRLHRT
Trigger: AGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGGACTGCCAGCAGCTaGTCTGTCAGTCTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFRTASS*SVSLFL
Trigger: AAGAAACAGACTGACAGAGCAGCTGCTGGCAGTCCT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 2 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR CAA 90 bp GATAGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTaGAGCTCTTCCTCAAAGGGTAAGGTTTTCTTAGGGATCTCCTTG +
Preference number: 2 (lower is better)
Translates to: DSRVVISGGHLGLLI*SSSSKGKVFLGISL
Trigger: CAAGGAGATCCCTAAGAAAACCTTACCCTTTGAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 2 (lower is better)
Translates to: SRVVISGGHLGLLILSSSNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 2 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCTCAAATCATTCCTTTaGCCTTCACTGTTACCAGCA +
Preference number: 2 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLKSFL*PSLLPA
Trigger: TGCTGGTAACAGTGAAGGGCAAAGGAATGATTTGAG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR CAA 90 bp CAGGACTGCCAGCAGCTGCTCTGTCAGTCTGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCAAATATAC +
Preference number: 2 (lower is better)
Translates to: QDCQQLLCQSVSSEP*LVHSSNKSFQIQIY
Trigger: GTATATTTGAATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGACTGACAGAGCAGCTGCTGGCAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR CAA 90 bp GCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATTATaGCGGGCAGCTTCTGTTGTTTCAACATGCCAAGGTTTAACATCC +
Preference number: 2 (lower is better)
Translates to: AVHSWLRASKPVFSL*RAASVVSTCQGLTS
Trigger: GGATGTTAAACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCAATAATGAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAGGAATAAAGTCCACTaGTCTGCTTTGGTTTTTGCA +
Preference number: 2 (lower is better)
Translates to: SRVVISGGHLGLLILSSSRNKVH*SALVFA
Trigger: TGCAAAAACCAAAGCAGATCAGTGGACTTTATTCCT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCATAACATCCTCTTTCTaGCAAACATGGGTGGACTGT +
Preference number: 2 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIITSSF*QTWVDC
Trigger: ACAGTCCACCCATGTTTGTCAGAAAGAGGATGTTAT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTCACTCGGCCTATCTTaGACATTCTTCCTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGSLGLS*TFFLPS
Trigger: GGAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 2 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTT +
Preference number: 2 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSVVST*QGLTSF
Trigger: AAAGGATGTTAAACCTTGGCATGTTGAAACAACAGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTCTGACAAACATGGGTaGACTGTAGATAAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGSDKHG*TVDKAA
Trigger: TGCAGCCTTATCTACAGTCCACCCATGTTTGTCAGA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTAGCTGTACATTCATaGCTCAGAGCATCAAAACCT +
Preference number: 2 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLAVHS*LRASKP
Trigger: AGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATAACATCCTCTTTCTaGCAAACATGGGTGGACTGT +
Preference number: 2 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFITSSF*QTWVDC
Trigger: ACAGTCCACCCATGTTTGTCAGAAAGAGGATGTTAT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 2 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 2 (lower is better)
Translates to: SRVVISGGHLGLLILSSSFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 2 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGGAATAAAGTCCACTaGTCTGCTTTGGTTTTTGCA +
Preference number: 2 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNRNKVH*SALVFA
Trigger: TGCAAAAACCAAAGCAGATCAGTGGACTTTATTCCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCATCTATCTTTATGCTaGTTATGTCCAAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIHLSLC*LCPKPS
Trigger: TGAAGGTTTTGGACATAAGCAGCATAAAGATAGATG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 2 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTT +
Preference number: 2 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVSVVST*QGLTSF
Trigger: AAAGGATGTTAAACCTTGGCATGTTGAAACAACAGA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 2 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 2 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCTGACAAACATGGGTaGACTGTAGATAAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISDKHG*TVDKAA
Trigger: TGCAGCCTTATCTACAGTCCACCCATGTTTGTCAGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 2 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCTCAAATCATTCCTTTaGCCTTCACTGTTACCAGCA +
Preference number: 2 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILKSFL*PSLLPA
Trigger: TGCTGGTAACAGTGAAGGGCAAAGGAATGATTTGAG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGGAATAAAGTCCACTaGTCTGCTTTGGTTTTTGCA +
Preference number: 2 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKRNKVH*SALVFA
Trigger: TGCAAAAACCAAAGCAGATCAGTGGACTTTATTCCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 2 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 2 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCAGGGGATAGCAGGGTaGTCATTTCAGGTGGCCACT +
Preference number: 3 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWQGIAG*SFQVAT
Trigger: AGTGGCCACCTGAAATGACAACCCTGCTATCCCCTG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR GCA 72 bp CTTTTAATCTGCTCTTCCACCGTGAGTTGTTCTGACTaGACCTCCACTCTGGGAAACAAAGGCTTAGCTGTA +
Preference number: 3 (lower is better)
Translates to: LLICSSTVSCSD*TSTLGNKGLAV
Trigger: TACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 3 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTCTTAGGGATCTCCTaGGAAGGAGGCCAAATGACT +
Preference number: 3 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFLGIS*EGGQMT
Trigger: AGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTTTCCTGTTACTCTTaGTGTCTTCAGCTTCACTCG +
Preference number: 3 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFSCYS*CLQLHS
Trigger: CGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCAGGGGATAGCAGGGTaGTCATTTCAGGTGGCCACT +
Preference number: 3 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIQGIAG*SFQVAT
Trigger: AGTGGCCACCTGAAATGACAACCCTGCTATCCCCTG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCACTCGGCCTATCTaGCACATTCTTCCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFTRPI*HILPSF
Trigger: GAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 3 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 3 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 3 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 3 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 3 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTTTCCTGTTACTCTTaGTGTCTTCAGCTTCACTCG +
Preference number: 3 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFSCYS*CLQLHS
Trigger: CGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR GCA 72 bp TTTTCATTATTGCGGGCAGCTTCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTTCCAAATTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: FSLLRAASVVST*QGLTSFPNSLK
Trigger: TTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCAATAATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCACTTCGTGGAGGTCTaGCACACCCTCGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWHFVEV*HTLAPS
Trigger: GCTCGGGGCGAGGGTGTGTCAGACCTCCACGAAGTG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCTCCAACTGGCATGCTaGCTGGATGCTGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLQLAC*LDAGWD
Trigger: GTCCCACCCAGCATCCAGTCAGCATGCCAGTTGGAG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWTPGNS*LVPRHP
Trigger: CGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTCTCTGTGTGTGCTCTaGCAGGCGAGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSLCVL*QARRHC
Trigger: GCAGTGCCTCCTCGCCTGTCAGAGCACACACAGAGA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCCTGAAAGCAATGGGTaGAGTGGAGGCCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLPESNG*SGGPLH
Trigger: GTGGAGCGGGCCTCCACTGCACCCATTGCTTTCAGG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAACCGGGGTTGCTGCTaGACATGGGATGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWNRGCC*TWDGPF
Trigger: AAAGGGGCCATCCCATGTCCAGCAGCAACCCCGGTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTGCGGCAGTCACCCCTaGAAACAGCTGCCTGGTACC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSCGSHP*KQLPGT
Trigger: GGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGCCGCTGGCTCAAATaGACCTGGCTTTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGRWLK*TWLWLK
Trigger: CTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGAGCCTGGGCTGGGTTaGACCACAGTGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWEPGLG*TTVHSE
Trigger: TTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGCCTCAGGAGGTTaGGGGAGCCCTTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSASGG*GSPSAL
Trigger: CAATGCAGAAGGGCTCCCTCAACCTCCTGAGGCAGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCAGGCTGCACAGGACTaGCAGCAGCTGCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIQAAQD*QQLLCQ
Trigger: CTGACAGAGCAGCTGCTGGCAGTCCTGTGCAGCCTG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVTPGNS*LVPRHP
Trigger: CGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCATGGTGGAGCCTCTTaGCAGCGACTGTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLHGGAS*QRLFLA
Trigger: CGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAACCGGGGTTGCTGCTaGACATGGGATGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSNRGCC*TWDGPF
Trigger: AAAGGGGCCATCCCATGTCCAGCAGCAACCCCGGTT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLRETTS*RSDTPS
Trigger: CGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSRETTS*RSDTPS
Trigger: CGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATGCGGCAGTCACCCCTaGAAACAGCTGCCTGGTACC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVCGSHP*KQLPGT
Trigger: GGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTCATCTACTGGAGGTaGAGGAAGAGGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLIYWR*RKREAW
Trigger: CCAGGCCTCCCTCTTCCTCCACCTCCAGTAGATGAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGAGCCTGGGCTGGGTTaGACCACAGTGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLEPGLG*TTVHSE
Trigger: TTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTTCCTGGCTGCTTCTTaGAGTGCCAACCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLFLAAS*SANLAA
Trigger: AGCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTGGAACCGGGGTTGCTaGTGGACATGGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGWNRGC*WTWDGP
Trigger: GGGGCCATCCCATGTCCAGCAGCAACCCCGGTTCCA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCATATCTCTGTGTGTaGTCTGACAGGCGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSYLCV*SDRRGG
Trigger: GCCTCCTCGCCTGTCAGAGCACACACAGAGATATGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGTATCTGCTCCCCCTTaGCACTTGGCCGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFVSAPP*HLAAGS
Trigger: TGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATAC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGCAGCGACTGTTTCTaGCGATGTTGTGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGSDCF*RCCGEL
Trigger: CAACTCTCCACAACATCGCCAGAAACAGTCGCTGCC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGCTGCTAAAACATGGTaGAGCCTCTTGGCAGCGACT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWAAKTW*SLLAAT
Trigger: AGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGCTGAGGCTTGGTTTTaGAGCAGGCTGCACAGGACT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSAEAWF*SRLHRT
Trigger: AGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGGAGCCCTTCTGCATTaGGAACATGGATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLGALLH*EHGWVQ
Trigger: CTGGACCCATCCATGTTCCCAATGCAGAAGGGCTCC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAACTGGCATGCTGACTaGATGCTGGGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVNWHAD*MLGGTG
Trigger: CCCAGTCCCACCCAGCATCCAGTCAGCATGCCAGTT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATGGGTTTGGGCAATGTaGGAGGTGGCAACACACCGG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVWVWAM*EVATHR
Trigger: CCGGTGTGTTGCCACCTCCCACATTGCCCAAACCCA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGAGCCTGGGCTGGGTTaGACCACAGTGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVEPGLG*TTVHSE
Trigger: TTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTCTCTGTGTGTGCTCTaGCAGGCGAGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSLCVL*QARRHC
Trigger: GCAGTGCCTCCTCGCCTGTCAGAGCACACACAGAGA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCTCTGTGTGTGCTCTaGCAGGCGAGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSLCVL*QARRHC
Trigger: GCAGTGCCTCCTCGCCTGTCAGAGCACACACAGAGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGCTCTTCCACCGTaGGTTGTTCTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSALPP*VVLTAP
Trigger: AGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGGAGGCCCGCTCCACTaGAGGGTCTATCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFGGPLH*RVYQAS
Trigger: ACTTGCTTGATAGACCCTTCAGTGGAGCGGGCCTCC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCACTTCGTGGAGGTCTaGCACACCCTCGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIHFVEV*HTLAPS
Trigger: GCTCGGGGCGAGGGTGTGTCAGACCTCCACGAAGTG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACACTTCGTGGAGGTCTaGCACACCCTCGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHFVEV*HTLAPS
Trigger: GCTCGGGGCGAGGGTGTGTCAGACCTCCACGAAGTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCACTTCGTGGAGGTCTaGCACACCCTCGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHFVEV*HTLAPS
Trigger: GCTCGGGGCGAGGGTGTGTCAGACCTCCACGAAGTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTCCTGGCTGCTTCTTaGAGTGCCAACCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFLAAS*SANLAA
Trigger: AGCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCTTCCTCTGGCTGGTTaGAACGCAAGAAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLPLAG*NARSGR
Trigger: TCTTCCACTTCTTGCGTTTCAACCAGCCAGAGGAAG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAATTGGAACCGGGGTTaGTGCTGGACATGGGATGGC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPINWNRG*CWTWDG
Trigger: GCCATCCCATGTCCAGCAGCAACCCCGGTTCCAATT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGTTCTCATCTCAGTTaGAGAAGCATCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGSHLS*RSICGC
Trigger: GCAACCGCAGATGCTTCTGCAACTGAGATGAGAACC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGTPGNS*LVPRHP
Trigger: CGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCTCTCCCGAGGATCCTaGCATCACAGCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLSRGS*HHSFSI
Trigger: GATGCTAAAGCTGTGATGGCAGGATCCTCGGGAGAG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGTATCTGCTCCCCCTTaGCACTTGGCCGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNVSAPP*HLAAGS
Trigger: TGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATAC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTATCTGCTCCCCCTTaGCACTTGGCCGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVSAPP*HLAAGS
Trigger: TGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGCATGCTGACTGGATaGTGGGTGGGACTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGMLTG*WVGLGL
Trigger: CAAGCCCAGTCCCACCCAGCATCCAGTCAGCATGCC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGCATGCTGACTGGATaGTGGGTGGGACTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGMLTG*WVGLGL
Trigger: CAAGCCCAGTCCCACCCAGCATCCAGTCAGCATGCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCATGGTGGAGCCTCTTaGCAGCGACTGTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFHGGAS*QRLFLA
Trigger: CGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGAAGCTGCTAAAACATaGTGGAGCCTCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSEAAKT*WSLLAA
Trigger: CGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGAAGCTGCTAAAACATaGTGGAGCCTCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLEAAKT*WSLLAA
Trigger: CGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCAGATTTTTGCGACATaGGCCTTCTTGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWQIFAT*AFLVGV
Trigger: AACCCCCACCAAGAAGGCCCATGTCGCAAAAATCTG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAGAGCGACTCCTGGGTaGAGAAGGGGAAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVRATPG*RRGSVC
Trigger: GCAAACACTTCCCCTTCTCCACCCAGGAGTCGCTCT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCTGCTGGACATGGGATaGCCCCTTTGGATAACTTTG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLLDMG*PLWITL
Trigger: CAAAGTTATCCAAAGGGGCCATCCCATGTCCAGCAG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTGGAAACAGCTGCCTaGTACCTCGCCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLETAA*YLAIRS
Trigger: GGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTGGAAACAGCTGCCTaGTACCTCGCCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLETAA*YLAIRS
Trigger: GGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGCGGCAGTCACCCCTaGAAACAGCTGCCTGGTACC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSCGSHP*KQLPGT
Trigger: GGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTCCCCCTTGCCACTTaGCCGCTGGCTCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLPLAT*PLAQMD
Trigger: GTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGATGCTGGGTGGGACTaGGCTTGGAGCTTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLDAGWD*AWSFVY
Trigger: ATACACAAAGCTCCAAGCCCAGTCCCACCCAGCATC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGTAAGTTCCTCCAACTaGCATGCTGACTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWVSSSN*HADWML
Trigger: CAGCATCCAGTCAGCATGCCAGTTGGAGGAACTTAC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTGGAACTGTGTGTaGGAGACAGTTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSWNCV*ETVCRV
Trigger: GACTCTGCAAACTGTCTCTCACACACAGTTCCAGGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTCCTGATTTCCTCTTaGGCGTCCACAGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFLISS*ASTDSL
Trigger: CAGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGTGTCGGGCACCATGTaGTCAGTGGAATTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLVSGTM*SVEFSP
Trigger: TGGACTAAATTCCACTGATCACATGGTGCCCGACAC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATCTGCTCTTCCACCGTaGGTTGTTCTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVSALPP*VVLTAP
Trigger: AGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTCTGCTCTTCCACCGTaGGTTGTTCTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISALPP*VVLTAP
Trigger: AGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACACTTCGTGGAGGTCTaGCACACCCTCGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHFVEV*HTLAPS
Trigger: GCTCGGGGCGAGGGTGTGTCAGACCTCCACGAAGTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCTGCCTCAGGAGGTTaGGGGAGCCCTTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSASGG*GSPSAL
Trigger: CAATGCAGAAGGGCTCCCTCAACCTCCTGAGGCAGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGCTGGCTCCCAGGGTaGCTCTTAAAAGCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSWLPG*LLKAGE
Trigger: CTCGCCAGCTTTTAAGAGTCACCCTGGGAGCCAGCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTGGAACCGGGGTTGCTaGTGGACATGGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRWNRGC*WTWDGP
Trigger: GGGGCCATCCCATGTCCAGCAGCAACCCCGGTTCCA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTGGAACCGGGGTTGCTaGTGGACATGGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIWNRGC*WTWDGP
Trigger: GGGGCCATCCCATGTCCAGCAGCAACCCCGGTTCCA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGGAACCGGGGTTGCTaGTGGACATGGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKWNRGC*WTWDGP
Trigger: GGGGCCATCCCATGTCCAGCAGCAACCCCGGTTCCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCAGGCGAGGAGGCACTaGAACCTTGCGGATGATTTC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFQARRH*NLADDF
Trigger: GAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAGTTGCAGAAGCATCTaGGGTTGCATATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVSCRSI*GCISQA
Trigger: GGCCTGGGATATGCAACCGCAGATGCTTCTGCAACT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGTTTTGGAGCAGGCTaGACAGGACTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGFGAG*TGLPAA
Trigger: AGCTGCTGGCAGTCCTGTGCAGCCTGCTCCAAAACC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAGCAGCACTGTCTTCTaGAAATCCACTCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSSTVF*KSTLRL
Trigger: AAGCCTGAGAGTGGATTTGCAGAAGACAGTGCTGCT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAAAAGCGTTCAATCCTaGGCCGACTGCTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLKSVQS*ADCSGN
Trigger: ATTCCCTGAGCAGTCGGCGCAGGATTGAACGCTTTT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTGACTGAGAGTATCTaGTCCCCCTTGCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILTESI*SPLPLG
Trigger: GCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCATGAAGTCTCCACTGTaGTTTTCCGGAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSMKSPL*FSGAEE
Trigger: CTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTCAT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGATTACTTTGAGAGCCTaGGCTGGGTTGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWITLRA*AGLNHS
Trigger: ACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAAT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGGCAGCGACTGTTTCTaGCGATGTTGTGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVGSDCF*RCCGEL
Trigger: CAACTCTCCACAACATCGCCAGAAACAGTCGCTGCC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGCTGCTAAAACATGGTaGAGCCTCTTGGCAGCGACT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIAAKTW*SLLAAT
Trigger: AGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGAAGCTGCTAAAACATaGTGGAGCCTCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIEAAKT*WSLLAA
Trigger: CGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTGCTGGACATGGGATaGCCCCTTTGGATAACTTTG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLLDMG*PLWITL
Trigger: CAAAGTTATCCAAAGGGGCCATCCCATGTCCAGCAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACCTCTTCTCTACAATTaGAACCGGGGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVPLLYN*NRGCCW
Trigger: CCAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGACATCCTCATAGGTTaGTGGGGCATGCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSDILIG*WGMLEV
Trigger: GACTTCAAGCATGCCCCACCAACCTATGAGGATGTC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNRETTS*RSDTPS
Trigger: CGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRETTS*RSDTPS
Trigger: CGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGATTGTTTCTTCACCTTaGCCAAACCACCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWIVSSP*PNHQAL
Trigger: CAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAAT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGGCAGTTCAGGGGACTaGGAAAATGCTGTCACATCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLGSSGD*ENAVTS
Trigger: AGATGTGACAGCATTTTCCCAGTCCCCTGAACTGCC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGCCGCTGGCTCAAATaGACCTGGCTTTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGRWLK*TWLWLK
Trigger: CTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATGCTGACTGGATGCTaGGTGGGACTGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSMLTGC*VGLGLE
Trigger: CTCCAAGCCCAGTCCCACCCAGCATCCAGTCAGCAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATATGCTGACTGGATGCTaGGTGGGACTGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNMLTGC*VGLGLE
Trigger: CTCCAAGCCCAGTCCCACCCAGCATCCAGTCAGCAT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAACTGGCATGCTGACTaGATGCTGGGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSNWHAD*MLGGTG
Trigger: CCCAGTCCCACCCAGCATCCAGTCAGCATGCCAGTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTCATCTACTGGAGGTaGAGGAAGAGGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLIYWR*RKREAW
Trigger: CCAGGCCTCCCTCTTCCTCCACCTCCAGTAGATGAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGGGCAATGTGGGAGGTaGCAACACACCGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFGQCGR*QHTGFS
Trigger: GGAAAAACCGGTGTGTTGCCACCTCCCACATTGCCC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTGGGTTTGGGCAATGTaGGAGGTGGCAACACACCGG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGWVWAM*EVATHR
Trigger: CCGGTGTGTTGCCACCTCCCACATTGCCCAAACCCA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGAGCCTGGGCTGGGTTaGACCACAGTGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSEPGLG*TTVHSE
Trigger: TTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAAATTTTCAGCCATTTaGACAGTTCGGTTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWKFSAI*TVRLAA
Trigger: AGCGGCCAACCGAACTGTTCAAATGGCTGAAAATTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCCTGGCTGCTTCTTaGAGTGCCAACCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFLAAS*SANLAA
Trigger: AGCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATCAAAGATGCGGCTGTaGCCACTTTCAGGTGACATC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVSKMRL*PLSGDI
Trigger: GATGTCACCTGAAAGTGGTCACAGCCGCATCTTTGA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACATCTACTGAAGTTTaGAGTACGTCAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTSTEV*STSGGG
Trigger: TCCCCCACCTGACGTACTTCAAACTTCAGTAGATGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTCCAACTGGCATGCTaGCTGGATGCTGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLQLAC*LDAGWD
Trigger: GTCCCACCCAGCATCCAGTCAGCATGCCAGTTGGAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTGGCTTTTCAAGTaGACATCAGTCTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSWLFK*TSVSRF
Trigger: AAAGCGGGAGACTGATGTTCACTTGAAAAGCCAGGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGCATCGATAACCTTTTaGTTGACGACCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWASITF*LTTFGA
Trigger: AGCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAATTGGAACCGGGGTTaGTGCTGGACATGGGATGGC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSNWNRG*CWTWDG
Trigger: GCCATCCCATGTCCAGCAGCAACCCCGGTTCCAATT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCAGGCGAGGAGGCACTaGAACCTTGCGGATGATTTC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFQARRH*NLADDF
Trigger: GAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAGGCGAGGAGGCACTaGAACCTTGCGGATGATTTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQARRH*NLADDF
Trigger: GAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATATCTCTGTGTGTaGTCTGACAGGCGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSYLCV*SDRRGG
Trigger: GCCTCCTCGCCTGTCAGAGCACACACAGAGATATGA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAGTCACAGCCAGATTTaGCAGCTTCTGAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSHSQI*QLLSYV
Trigger: CACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGTTGCAGAAGCATCTaGGGTTGCATATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSCRSI*GCISQA
Trigger: GGCCTGGGATATGCAACCGCAGATGCTTCTGCAACT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACTCGGCCTATCTTaGACATTCTTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSLGLS*TFFLPS
Trigger: GGAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAGGCTGCACAGGACTaGCAGCAGCTGCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQAAQD*QQLLCQ
Trigger: CTGACAGAGCAGCTGCTGGCAGTCCTGTGCAGCCTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCTGAAAGCAATGGGTaGAGTGGAGGCCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPESNG*SGGPLH
Trigger: GTGGAGCGGGCCTCCACTGCACCCATTGCTTTCAGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCTGAAAGCAATGGGTaGAGTGGAGGCCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPESNG*SGGPLH
Trigger: GTGGAGCGGGCCTCCACTGCACCCATTGCTTTCAGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGCAGCACTGTCTTCTaGAAATCCACTCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSSTVF*KSTLRL
Trigger: AAGCCTGAGAGTGGATTTGCAGAAGACAGTGCTGCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKTPGNS*LVPRHP
Trigger: CGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRTPGNS*LVPRHP
Trigger: CGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCAAGATTCCCATTTCTaGCTCAGGAGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIQDSHF*LRRLRE
Trigger: CTCCCTCAACCTCCTGAGGCAGAAATGGGAATCTTG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAATCCTGCGCCGACTaGTCAGGGAATCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQSCAD*SGNPPS
Trigger: TGAAGGAGGATTCCCTGAGCAGTCGGCGCAGGATTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCAATCCTGCGCCGACTaGTCAGGGAATCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFQSCAD*SGNPPS
Trigger: TGAAGGAGGATTCCCTGAGCAGTCGGCGCAGGATTG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAAAAGCCACACAGCCTaGTTAACATCACCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWKSHTA*LTSPFC
Trigger: GCAGAAAGGTGATGTTAAGCAGGCTGTGTGGCTTTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGCATGCTGACTGGATaGTGGGTGGGACTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGMLTG*WVGLGL
Trigger: CAAGCCCAGTCCCACCCAGCATCCAGTCAGCATGCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGCTGCTAAAACATGGTaGAGCCTCTTGGCAGCGACT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFAAKTW*SLLAAT
Trigger: AGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGAAATTGGTTTGCTTTaGGGCAAGTGCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSEIGLL*GKCNCS
Trigger: GGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCCGGTTTTCCTGTTTTaGAGGACATCATGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSPVFLF*RTSWLS
Trigger: AGACAGCCATGATGTCCTCCAAAACAGGAAAACCGG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAGAGCGACTCCTGGGTaGAGAAGGGGAAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGRATPG*RRGSVC
Trigger: GCAAACACTTCCCCTTCTCCACCCAGGAGTCGCTCT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCTGCTGGACATGGGATaGCCCCTTTGGATAACTTTG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILLDMG*PLWITL
Trigger: CAAAGTTATCCAAAGGGGCCATCCCATGTCCAGCAG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGCTGAGGCTTGGTTTTaGAGCAGGCTGCACAGGACT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNAEAWF*SRLHRT
Trigger: AGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGCTGAGGCTTGGTTTTaGAGCAGGCTGCACAGGACT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSAEAWF*SRLHRT
Trigger: AGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTGGAAACAGCTGCCTaGTACCTCGCCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLETAA*YLAIRS
Trigger: GGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTGGAAACAGCTGCCTaGTACCTCGCCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLETAA*YLAIRS
Trigger: GGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTGCGGCAGTCACCCCTaGAAACAGCTGCCTGGTACC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRCGSHP*KQLPGT
Trigger: GGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGCGGCAGTCACCCCTaGAAACAGCTGCCTGGTACC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKCGSHP*KQLPGT
Trigger: GGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTTCTTGCCATTTCCTaGCTGCTTCTTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFLAIS*LLLEVP
Trigger: TGGCACTTCAAGAAGCAGCCAGGAAATGGCAAGAAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGAGCCCTTCTGCATTaGGAACATGGATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGALLH*EHGWVQ
Trigger: CTGGACCCATCCATGTTCCCAATGCAGAAGGGCTCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGTAGGGCAGACTTGTaGGATCCAAAGATTGAGGTG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLCRADL*DPKIEV
Trigger: CACCTCAATCTTTGGATCCCACAAGTCTGCCCTACA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGCCGACCATATTCCCTaGTGTTGTTACTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLADHIP*CCYSCP
Trigger: TGGACAAGAGTAACAACACCAGGGAATATGGTCGGC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGATGTTTCCTTCCTCTaGCTGGTTGAAACGCAAGAA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWDVSFL*LVETQE
Trigger: TTCTTGCGTTTCAACCAGCCAGAGGAAGGAAACATC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGATCAGCAATGCCCCTaGAAATATCACCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWDQQCP*KYHLHQ
Trigger: CTGATGAAGGTGATATTTCCAGGGGCATTGCTGATC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTGCAGACATCTCCTCTaGCTAGCTCAGGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWCRHLL*LAQEFS
Trigger: AGAAAATTCCTGAGCTAGCCAGAGGAGATGTCTGCA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCGAACATCCCCACCTTaGATCTCCTCCTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSRTSPP*ISSCFT
Trigger: TGTAAAACAGGAGGAGATCCAAGGTGGGGATGTTCG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGGCTCAAATGGACCTaGCTTTGGCTGAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLWLKWT*LWLKKT
Trigger: AGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTGCCACTTGGCCGCTaGCTCAAATGGACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLPLGR*LKWTWL
Trigger: AAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCTCCCCCTTGCCACTTaGCCGCTGGCTCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILPLAT*PLAQMD
Trigger: GTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCTCCCCCTTGCCACTTaGCCGCTGGCTCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFILPLAT*PLAQMD
Trigger: GTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAGGTGGAGATGGAGGTaGAAGGGGGCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGRWRWR*KGALTF
Trigger: GAAAGTGAGTGCCCCCTTCCACCTCCATCTCCACCT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGGTGGAGATGGAGGTaGAAGGGGGCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNRWRWR*KGALTF
Trigger: GAAAGTGAGTGCCCCCTTCCACCTCCATCTCCACCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCCTTTATCTTCTCTGTaGACAGTGAGGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWPLSSL*TVREET
Trigger: GGTTTCTTCCCTCACTGTCCACAGAGAAGATAAAGG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAGGAAGAGGGAGGCCTaGAAAACTTTCAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWRKREA*KTFKFS
Trigger: GCTGAATTTGAAAGTTTTCCAGGCCTCCCTCTTCCT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGGCAATGTGGGAGGTaGCAACACACCGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGQCGR*QHTGFS
Trigger: GGAAAAACCGGTGTGTTGCCACCTCCCACATTGCCC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTTTACATTCCATATCTaGCAGGGAGGTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLFTFHI*QGGCQF
Trigger: GAACTGGCAACCTCCCTGTCAGATATGGAATGTAAA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTCCTGATTTCCTCTTaGGCGTCCACAGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFLISS*ASTDSL
Trigger: CAGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAAATTTTCAGCCATTTaGACAGTTCGGTTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLKFSAI*TVRLAA
Trigger: AGCGGCCAACCGAACTGTTCAAATGGCTGAAAATTT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAAATATGTCCAGCAATaGCATCCTCATAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWKYVQQ*HPHRLV
Trigger: CACCAACCTATGAGGATGTCATTGCTGGACATATTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCGGAAGCAGGACTTATaGAAATTCTGCTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIRKQDL*KFCLSA
Trigger: GGCAGACAAGCAGAATTTTCATAAGTCCTGCTTCCG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGATAACATCCTCTTTCTaGCAAACATGGGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWITSSF*QTWVDC
Trigger: ACAGTCCACCCATGTTTGTCAGAAAGAGGATGTTAT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCTGCTCTTCCACCGTaGGTTGTTCTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSALPP*VVLTAP
Trigger: AGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGTAGATGGGACGGCTaGATTTATTTTAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSRWDG*IYFSRA
Trigger: CGCTCTGCTAAAATAAATTCAGCCGTCCCATCTACT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGAGGCCCGCTCCACTaGAGGGTCTATCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGGPLH*RVYQAS
Trigger: ACTTGCTTGATAGACCCTTCAGTGGAGCGGGCCTCC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409273.6
ENST00000409605.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAATTTCCCAGTCCCCTaGAAGCAATGGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSNFPVP*KQWVQW
Trigger: CCACTGCACCCATTGCTTTCAGGGGACTGGGAAATT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGTGTGCTTTTCAAGATaGGAGACCATTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWVCFSR*ETISVP
Trigger: TGGAACAGAAATGGTCTCTCATCTTGAAAAGCACAC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCTGCCTCAGGAGGTTaGGGGAGCCCTTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSASGG*GSPSAL
Trigger: CAATGCAGAAGGGCTCCCTCAACCTCCTGAGGCAGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGCTGGCTCCCAGGGTaGCTCTTAAAAGCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSWLPG*LLKAGE
Trigger: CTCGCCAGCTTTTAAGAGTCACCCTGGGAGCCAGCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCCAGAGTTGAGGAAGTaGCACTGTGATCACTATATC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLPELRK*HCDHYI
Trigger: GATATAGTGATCACAGTGTCACTTCCTCAACTCTGG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGCTGTCACATCTACTaGAGTTTGAAGTACGTCAGG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLCCHIY*SLKYVR
Trigger: CCTGACGTACTTCAAACTTCAGTAGATGTGACAGCA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACCAGCAATGATTTCTTaGTCAGCAATGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVPAMIS*SAMPLE
Trigger: TTCCAGGGGCATTGCTGATCAAGAAATCATTGCTGG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCCAGCAATGATTTCTTaGTCAGCAATGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIPAMIS*SAMPLE
Trigger: TTCCAGGGGCATTGCTGATCAAGAAATCATTGCTGG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATGAACCTCATCCACTaGATGAAGCTGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLMNLIH*MKLSKL
Trigger: CAACTTGGACAGCTTCATTCAGTGGATGAGGTTCAT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTACCAAATGTACTCTaGGGCTCGGTCATAAAAACC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLPNVL*GSVIKT
Trigger: GGTTTTTATGACCGAGCCTCAGAGTACATTTGGTAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTCCAACTGGCATGCTaGCTGGATGCTGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLQLAC*LDAGWD
Trigger: GTCCCACCCAGCATCCAGTCAGCATGCCAGTTGGAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAACAAAGTTTGCTTCTaGAAGTCCCCTGAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSNKVCF*KSPERS
Trigger: CGACCTTTCAGGGGACTTTCAGAAGCAAACTTTGTT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATCCTGGCTTTTCAAGTaGACATCAGTCTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVSWLFK*TSVSRF
Trigger: AAAGCGGGAGACTGATGTTCACTTGAAAAGCCAGGA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCTTCTCTGTGGACAGTaGGGGAAGAAACCCATTTTT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLLCGQ*GKKPIF
Trigger: AAAAATGGGTTTCTTCCCTCACTGTCCACAGAGAAG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTCCGTGTGTTCACTaGTGGTCATCACCATTACTT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSPCVH*WSSPLL
Trigger: AAGTAATGGTGATGACCAGCAGTGAACACACGGAGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGGGGCAAGTGCAACTaGTCCAAATACTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLWGKCN*SKYFFC
Trigger: ACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTGCTTTGGGGCAAGTaGAACTGCTCCAAATACTTC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLLWGK*NCSKYF
Trigger: GAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGCATCGATAACCTTTTaGTTGACGACCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLASITF*LTTFGA
Trigger: AGCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTGCTTCATGATGAGCTaGTACTTGGTGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSCFMMS*YLVLYC
Trigger: ACAGTACAGCACCAAGTAGCAGCTCATCATGAAGCA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGTGACTACGAACAGTTaGTTCATGATGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSVTTNS*FMMSCY
Trigger: GTAGCAGCTCATCATGAAGCAACTGTTCGTAGTCAC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCATATCTCTGTGTGTaGTCTGACAGGCGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSYLCV*SDRRGG
Trigger: GCCTCCTCGCCTGTCAGAGCACACACAGAGATATGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTCAGAAACTGGGCCATaGTCAAATTCCCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSETGP*SNSLNH
Trigger: ATGGTTCAGGGAATTTGAGCATGGCCCAGTTTCTGA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGAGCAGATCCTGGGCTaGTTAACAGGAATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLEQILG*LTGIFS
Trigger: AGAAAAGATTCCTGTTAAGCAGCCCAGGATCTGCTC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAGTCACAGCCAGATTTaGCAGCTTCTGAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISHSQI*QLLSYV
Trigger: CACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGTTGCAGAAGCATCTaGGGTTGCATATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSCRSI*GCISQA
Trigger: GGCCTGGGATATGCAACCGCAGATGCTTCTGCAACT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAGGCTGCACAGGACTaGCAGCAGCTGCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQAAQD*QQLLCQ
Trigger: CTGACAGAGCAGCTGCTGGCAGTCCTGTGCAGCCTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGGTTTTGGAGCAGGCTaGACAGGACTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIGFGAG*TGLPAA
Trigger: AGCTGCTGGCAGTCCTGTGCAGCCTGCTCCAAAACC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGTTTTGGAGCAGGCTaGACAGGACTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGFGAG*TGLPAA
Trigger: AGCTGCTGGCAGTCCTGTGCAGCCTGCTCCAAAACC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGTTTTGGAGCAGGCTaGACAGGACTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGFGAG*TGLPAA
Trigger: AGCTGCTGGCAGTCCTGTGCAGCCTGCTCCAAAACC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTPGNS*LVPRHP
Trigger: CGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGGCTGCTTCTTGAAGTaGCAACCTGGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFGCFLK*QPGCYE
Trigger: TTCATAGCAGCCAGGTTGGCACTTCAAGAAGCAGCC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTGAGGGAGCCCTTCTaGATTGGGAACATGGATGGG +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLREPF*IGNMDG
Trigger: CCCATCCATGTTCCCAATGCAGAAGGGCTCCCTCAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCTTTCAGTCTTAATCTaGTTGGCTGGGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLSVLI*LAGVVI
Trigger: GATGACAACCCCAGCCAAGCAGATTAAGACTGAAAG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCACATCCACCGAGCTGTaGAGACATCTCCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGTSTEL*RHLLWL
Trigger: TAGCCAGAGGAGATGTCTGCACAGCTCGGTGGATGT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTCAAACATCCACCGTaGTGTTCTTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFKHPP*CSYISL
Trigger: AAGGGAGATGTAAGAACAGCACGGTGGATGTTTGAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGACCTTAACTGTGTTATaGACATCTCCAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWTLTVL*TSPGMM
Trigger: CATCATCCCTGGAGATGTGCATAACACAGTTAAGGT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTCTCCCGAGGATCCTaGCATCACAGCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLSRGS*HHSFSI
Trigger: GATGCTAAAGCTGTGATGGCAGGATCCTCGGGAGAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGCATGCTGACTGGATaGTGGGTGGGACTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGMLTG*WVGLGL
Trigger: CAAGCCCAGTCCCACCCAGCATCCAGTCAGCATGCC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAATTACTTTGAGAGCCTaGGCTGGGTTGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVITLRA*AGLNHS
Trigger: ACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAAT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGCAGCGACTGTTTCTaGCGATGTTGTGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGSDCF*RCCGEL
Trigger: CAACTCTCCACAACATCGCCAGAAACAGTCGCTGCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCATGGTGGAGCCTCTTaGCAGCGACTGTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIHGGAS*QRLFLA
Trigger: CGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATGGTGGAGCCTCTTaGCAGCGACTGTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHGGAS*QRLFLA
Trigger: CGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGAAATTGGTTTGCTTTaGGGCAAGTGCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVEIGLL*GKCNCS
Trigger: GGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGAAATTTGGGGAAATTaGTTTGCTTTGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWEIWGN*FALGQV
Trigger: CACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAACCGGGGTTGCTGCTaGACATGGGATGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRNRGCC*TWDGPF
Trigger: AAAGGGGCCATCCCATGTCCAGCAGCAACCCCGGTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAACCGGGGTTGCTGCTaGACATGGGATGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNRGCC*TWDGPF
Trigger: AAAGGGGCCATCCCATGTCCAGCAGCAACCCCGGTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCTCTTCTCTACAATTaGAACCGGGGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPLLYN*NRGCCW
Trigger: CCAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTATTGTGATTGTAGGTaGAGAGTCCCTACCACGAGT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSYCDCR*RVPTTS
Trigger: ACTCGTGGTAGGGACTCTCCACCTACAATCACAATA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTTTGAACAGTTCGGTTaGCCGCTTCATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLFEQFG*PLHISV
Trigger: CACAGAGATATGAAGCGGCCAACCGAACTGTTCAAA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTTTGCTTCAGAAACTaGGCCATGCTCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLCFRN*AMLKFP
Trigger: AGGGAATTTGAGCATGGCCCAGTTTCTGAAGCAAAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWNADSS*KVVLIS
Trigger: TGAGATGAGAACCACCTTCCAAGAGGAATCTGCATT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGACAAACATGGGTaGACTGTAGATAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSDKHG*TVDKAA
Trigger: TGCAGCCTTATCTACAGTCCACCCATGTTTGTCAGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAAGCAATGGGTGCAGTaGAGGCCCGCTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIKQWVQ*RPAPLK
Trigger: CTTCAGTGGAGCGGGCCTCCACTGCACCCATTGCTT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRETTS*RSDTPS
Trigger: CGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKRETTS*RSDTPS
Trigger: CGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTGGAAACAGCTGCCTaGTACCTCGCCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLETAA*YLAIRS
Trigger: GGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTGCATTGGGAACATaGATGGGTCCAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSALGT*MGPGCP
Trigger: AGGACAACCTGGACCCATCCATGTTCCCAATGCAGA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTTCCTTCCTCTGGCTaGTTGAAACGCAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFPSSG*LKRKKW
Trigger: CCACTTCTTGCGTTTCAACCAGCCAGAGGAAGGAAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGCAGACATCTCCTCTaGCTAGCTCAGGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLCRHLL*LAQEFS
Trigger: AGAAAATTCCTGAGCTAGCCAGAGGAGATGTCTGCA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGATAAAGAGACTCCATTaGCTGGGTCTCAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWIKRLH*LGLKKP
Trigger: TGGCTTTTTGAGACCCAGCCAATGGAGTCTCTTTAT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCGAACATCCCCACCTTaGATCTCCTCCTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIRTSPP*ISSCFT
Trigger: TGTAAAACAGGAGGAGATCCAAGGTGGGGATGTTCG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGGCCGCTGGCTCAAATaGACCTGGCTTTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIGRWLK*TWLWLK
Trigger: CTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGCCTTTGGGGGCTTTTaGAAGATTAACCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLAFGGF*KINLSS
Trigger: AGAACTGAGGTTAATCTTCCAAAAGCCCCCAAAGGC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGATGCTGGGTGGGACTaGGCTTGGAGCTTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGDAGWD*AWSFVY
Trigger: ATACACAAAGCTCCAAGCCCAGTCCCACCCAGCATC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTATGCTGACTGGATGCTaGGTGGGACTGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIMLTGC*VGLGLE
Trigger: CTCCAAGCCCAGTCCCACCCAGCATCCAGTCAGCAT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAACTGGCATGCTGACTaGATGCTGGGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQINWHAD*MLGGTG
Trigger: CCCAGTCCCACCCAGCATCCAGTCAGCATGCCAGTT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAACTGGCATGCTGACTaGATGCTGGGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFINWHAD*MLGGTG
Trigger: CCCAGTCCCACCCAGCATCCAGTCAGCATGCCAGTT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCCTTTATCTTCTCTGTaGACAGTGAGGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLPLSSL*TVREET
Trigger: GGTTTCTTCCCTCACTGTCCACAGAGAAGATAAAGG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGGAAAGGAGATGTGCTaGCTTTTGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVGKEMC*LLRWSW
Trigger: CCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTGGGTTTGGGCAATGTaGGAGGTGGCAACACACCGG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRWVWAM*EVATHR
Trigger: CCGGTGTGTTGCCACCTCCCACATTGCCCAAACCCA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGGGTTTGGGCAATGTaGGAGGTGGCAACACACCGG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKWVWAM*EVATHR
Trigger: CCGGTGTGTTGCCACCTCCCACATTGCCCAAACCCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCCTGGAACTGTGTGTaGGAGACAGTTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSWNCV*ETVCRV
Trigger: GACTCTGCAAACTGTCTCTCACACACAGTTCCAGGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGAGCCTGGGCTGGGTTaGACCACAGTGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIEPGLG*TTVHSE
Trigger: TTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCTCTTGTATGCCCTTaGCTTCGAGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSLVCP*LRDIFL
Trigger: AAGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCTCCACTTTCCTaGTTTCCTCTTGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSSPLS*FPLERP
Trigger: TGGACGCTCAAGAGGAAATCAGGAAAGTGGAGAAGA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGTGTCGGGCACCATGTaGTCAGTGGAATTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGVSGTM*SVEFSP
Trigger: TGGACTAAATTCCACTGATCACATGGTGCCCGACAC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTGTCGGGCACCATGTaGTCAGTGGAATTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVSGTM*SVEFSP
Trigger: TGGACTAAATTCCACTGATCACATGGTGCCCGACAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACTGCAACCTTGCGGATaGTTTCAACTGCATCATAAC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLQPCG*FQLHHN
Trigger: GTTATGATGCAGTTGAAATCATCCGCAAGGTTGCAG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCCTGGCTGCTTCTTaGAGTGCCAACCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFLAAS*SANLAA
Trigger: AGCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGTGTGCTTTTCAAGATaGGAGACCATTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLVCFSR*ETISVP
Trigger: TGGAACAGAAATGGTCTCTCATCTTGAAAAGCACAC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGCTGGCTCCCAGGGTaGCTCTTAAAAGCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSWLPG*LLKAGE
Trigger: CTCGCCAGCTTTTAAGAGTCACCCTGGGAGCCAGCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCAAAGATGCGGCTGTaGCCACTTTCAGGTGACATC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSKMRL*PLSGDI
Trigger: GATGTCACCTGAAAGTGGTCACAGCCGCATCTTTGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTCAAAGATGCGGCTGTaGCCACTTTCAGGTGACATC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGSKMRL*PLSGDI
Trigger: GATGTCACCTGAAAGTGGTCACAGCCGCATCTTTGA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCTTCCTCTGGCTGGTTaGAACGCAAGAAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNLPLAG*NARSGR
Trigger: TCTTCCACTTCTTGCGTTTCAACCAGCCAGAGGAAG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTCCTCTGGCTGGTTaGAACGCAAGAAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLPLAG*NARSGR
Trigger: TCTTCCACTTCTTGCGTTTCAACCAGCCAGAGGAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACCAGAGTTGAGGAAGTaGCACTGTGATCACTATATC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVPELRK*HCDHYI
Trigger: GATATAGTGATCACAGTGTCACTTCCTCAACTCTGG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAATTTGTGCCAGAGTTaGGGAAGTGACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVNLCQS*GSDTVI
Trigger: GATCACAGTGTCACTTCCTCAACTCTGGCACAAATT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAATTTGTGCCAGAGTTaGGGAAGTGACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPINLCQS*GSDTVI
Trigger: GATCACAGTGTCACTTCCTCAACTCTGGCACAAATT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTACATCTACTGAAGTTTaGAGTACGTCAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFTSTEV*STSGGG
Trigger: TCCCCCACCTGACGTACTTCAAACTTCAGTAGATGT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCAGGAGAGCCATTGTTaGTGGAATCCAATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIQESHC*WNPMVD
Trigger: ATCAACCATTGGATTCCATCAACAATGGCTCTCCTG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCATCACCACCAGCAATaGTTTCTTGATCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIHHHQQ*FLDQQC
Trigger: GCATTGCTGATCAAGAAATCATTGCTGGTGGTGATG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACATCACCACCAGCAATaGTTTCTTGATCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVHHHQQ*FLDQQC
Trigger: GCATTGCTGATCAAGAAATCATTGCTGGTGGTGATG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGACTGATAGTTACCGCTaGTTCTTCTTGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWTDSYR*FFLTLM
Trigger: CATCAAAGTCAAGAAGAATCAGCGGTAACTATCAGT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCATGAACCTCATCCACTaGATGAAGCTGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIMNLIH*MKLSKL
Trigger: CAACTTGGACAGCTTCATTCAGTGGATGAGGTTCAT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCAGGTTGTGAAAAACTaGACATTTCCTCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSQVVKN*TFPLSE
Trigger: CTCTGAGAGAGGAAATGTTCAGTTTTTCACAACCTG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTGTCAGTGTTTCATTTaGCTCTGTGTGGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWCQCFI*LCVELF
Trigger: AAACAACTCCACACAGAGTCAAATGAAACACTGACA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTACCAAATGTACTCTaGGGCTCGGTCATAAAAACC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLPNVL*GSVIKT
Trigger: GGTTTTTATGACCGAGCCTCAGAGTACATTTGGTAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTCTGAAAGTCCCCTaGAAGGTCGTAAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLLKVP*KVVSSS
Trigger: GGAGGAACTTACGACCTTTCAGGGGACTTTCAGAAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTGGCTTTTCAAGTaGACATCAGTCTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSWLFK*TSVSRF
Trigger: AAAGCGGGAGACTGATGTTCACTTGAAAAGCCAGGA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCTTCTCTGTGGACAGTaGGGGAAGAAACCCATTTTT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILLCGQ*GKKPIF
Trigger: AAAAATGGGTTTCTTCCCTCACTGTCCACAGAGAAG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTGCTTCATGATGAGCTaGTACTTGGTGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPICFMMS*YLVLYC
Trigger: ACAGTACAGCACCAAGTAGCAGCTCATCATGAAGCA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAATTGGAACCGGGGTTaGTGCTGGACATGGGATGGC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNWNRG*CWTWDG
Trigger: GCCATCCCATGTCCAGCAGCAACCCCGGTTCCAATT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAATTGGAACCGGGGTTaGTGCTGGACATGGGATGGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRNWNRG*CWTWDG
Trigger: GCCATCCCATGTCCAGCAGCAACCCCGGTTCCAATT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAGGCGAGGAGGCACTaGAACCTTGCGGATGATTTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQARRH*NLADDF
Trigger: GAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCAGGCGAGGAGGCACTaGAACCTTGCGGATGATTTC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIQARRH*NLADDF
Trigger: GAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTCAGAAACTGGGCCATaGTCAAATTCCCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISETGP*SNSLNH
Trigger: ATGGTTCAGGGAATTTGAGCATGGCCCAGTTTCTGA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAGAAGCATCTGCGGTTaGATATCCCAGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVRSICG*ISQAFK
Trigger: TTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGTTCTCATCTCAGTTaGAGAAGCATCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGSHLS*RSICGC
Trigger: GCAACCGCAGATGCTTCTGCAACTGAGATGAGAACC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGTTCTCATCTCAGTTaGAGAAGCATCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGSHLS*RSICGC
Trigger: GCAACCGCAGATGCTTCTGCAACTGAGATGAGAACC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTGGCTGCTATGAATTaGCTCCTGCTCAGATCTGTT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLAAMN*LLLRSV
Trigger: AACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAAGTGCCAACCTGGCTaGTATGAATTGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGKCQPG*YELPPA
Trigger: AGCAGGAGGCAATTCATAGCAGCCAGGTTGGCACTT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAAGTGCCAACCTGGCTaGTATGAATTGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFKCQPG*YELPPA
Trigger: AGCAGGAGGCAATTCATAGCAGCCAGGTTGGCACTT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGCTGCTTCTTGAAGTaGCAACCTGGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGCFLK*QPGCYE
Trigger: TTCATAGCAGCCAGGTTGGCACTTCAAGAAGCAGCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCATGTTCCCTTTTGTCTaGCTAGAGACCTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIMFPFV*LETCQI
Trigger: AATCTGGCAGGTCTCTAGGCAGACAAAAGGGAACAT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCAGTCGCTTCAAAGATaGGGCTGTGACCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFQSLQR*GCDHFQ
Trigger: CTGAAAGTGGTCACAGCCGCATCTTTGAAGCGACTG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTTCTTGATCAGCAATaGCCCTGGAAATATCACCTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFLDQQ*PWKYHL
Trigger: AAGGTGATATTTCCAGGGGCATTGCTGATCAAGAAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACCTTAACTGTGTTATaGACATCTCCAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTLTVL*TSPGMM
Trigger: CATCATCCCTGGAGATGTGCATAACACAGTTAAGGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATGAAGTCTCCACTGTaGTTTTCCGGAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSMKSPL*FSGAEE
Trigger: CTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTCAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCATGAAGTCTCCACTGTaGTTTTCCGGAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGMKSPL*FSGAEE
Trigger: CTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTCAT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTTGAGAGCCTGGGCTaGGTTGAACCACAGTGCATT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFESLG*VEPQCI
Trigger: AATGCACTGTGGTTCAACCCAGCCCAGGCTCTCAAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTTTCTGGCGATGTTGTaGAGAGTTGGTTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLFLAML*RVGYQN
Trigger: GTTCTGATAACCAACTCTCCACAACATCGCCAGAAA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACATGGTGGAGCCTCTTaGCAGCGACTGTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHGGAS*QRLFLA
Trigger: CGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACATGGGCCTTCTTGGTaGGGGTTCAACATAACTGTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSHGPSW*GFNITV
Trigger: GACAGTTATGTTGAACCCCCACCAAGAAGGCCCATG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCGACATGGGCCTTCTTaGTGGGGGTTCAACATAACT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFRHGPS*WGFNIT
Trigger: AGTTATGTTGAACCCCCACCAAGAAGGCCCATGTCG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACGACATGGGCCTTCTTaGTGGGGGTTCAACATAACT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRHGPS*WGFNIT
Trigger: AGTTATGTTGAACCCCCACCAAGAAGGCCCATGTCG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCAGATTTTTGCGACATaGGCCTTCTTGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNQIFAT*AFLVGV
Trigger: AACCCCCACCAAGAAGGCCCATGTCGCAAAAATCTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAGATTTTTGCGACATaGGCCTTCTTGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQIFAT*AFLVGV
Trigger: AACCCCCACCAAGAAGGCCCATGTCGCAAAAATCTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGAGCGACTCCTGGGTaGAGAAGGGGAAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRATPG*RRGSVC
Trigger: GCAAACACTTCCCCTTCTCCACCCAGGAGTCGCTCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAGAGCGACTCCTGGGTaGAGAAGGGGAAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIRATPG*RRGSVC
Trigger: GCAAACACTTCCCCTTCTCCACCCAGGAGTCGCTCT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGACATCCTCATAGGTTaGTGGGGCATGCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSDILIG*WGMLEV
Trigger: GACTTCAAGCATGCCCCACCAACCTATGAGGATGTC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAATTCCTCTTGGAAGGTaGTTCTCATCTCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVIPLGR*FSSQLQ
Trigger: CTGCAACTGAGATGAGAACCACCTTCCAAGAGGAAT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCATATTTCCTTGTCTTaGAGCAGCAGCTTCACTTAT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWHISLS*SSSFTY
Trigger: ATAAGTGAAGCTGCTGCTCCAAGACAAGGAAATATG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGCTGAGGCTTGGTTTTaGAGCAGGCTGCACAGGACT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKAEAWF*SRLHRT
Trigger: AGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGCCTCTGCTGAGGCTTaGTTTTGGAGCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTASAEA*FWSRLH
Trigger: GTGCAGCCTGCTCCAAAACCAAGCCTCAGCAGAGGC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAAGCAATGGGTGCAGTaGAGGCCCGCTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTKQWVQ*RPAPLK
Trigger: CTTCAGTGGAGCGGGCCTCCACTGCACCCATTGCTT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTRETTS*RSDTPS
Trigger: CGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTATTGTTTCTTCACCTTaGCCAAACCACCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFIVSSP*PNHQAL
Trigger: CAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAAT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTTAGTCGAAACCTTTaGAATCTCTTCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLSRNL*NLFILR
Trigger: CCTGAGGATGAAGAGATTCCAAAGGTTTCGACTAAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGAGCCCTTCTGCATTaGGAACATGGATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGALLH*EHGWVQ
Trigger: CTGGACCCATCCATGTTCCCAATGCAGAAGGGCTCC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGATGTTTCCTTCCTCTaGCTGGTTGAAACGCAAGAA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVDVSFL*LVETQE
Trigger: TTCTTGCGTTTCAACCAGCCAGAGGAAGGAAACATC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGCAGTTCAGGGGACTaGGAAAATGCTGTCACATCT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGSSGD*ENAVTS
Trigger: AGATGTGACAGCATTTTCCCAGTCCCCTGAACTGCC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGCAGTTCAGGGGACTaGGAAAATGCTGTCACATCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGSSGD*ENAVTS
Trigger: AGATGTGACAGCATTTTCCCAGTCCCCTGAACTGCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCCCAAGTGTGTCGATaGGTTGGGTTTCAAACATCC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPQVCR*VGFQTS
Trigger: GGATGTTTGAAACCCAACCCATCGACACACTTGGGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGAGACTCCATTGGCTaGGTCTCAAAAAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLRDSIG*VSKSHL
Trigger: TAAATGGCTTTTTGAGACCCAGCCAATGGAGTCTCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATAAAGAGACTCCATTaGCTGGGTCTCAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLIKRLH*LGLKKP
Trigger: TGGCTTTTTGAGACCCAGCCAATGGAGTCTCTTTAT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTGCCACTTGGCCGCTaGCTCAAATGGACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLPLGR*LKWTWL
Trigger: AAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGCCTTTGGGGGCTTTTaGAAGATTAACCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIAFGGF*KINLSS
Trigger: AGAACTGAGGTTAATCTTCCAAAAGCCCCCAAAGGC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAAACCCTCCATTTTCTaGTGGTCATTTCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWKPSIF*WSFLSS
Trigger: TGAACTGAGAAATGACCACCAGAAAATGGAGGGTTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGGTGGGACTGGGCTTaGAGCTTTGTGTATCAGTTA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGWDWA*SFVYQL
Trigger: TAACTGATACACAAAGCTCCAAGCCCAGTCCCACCC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGGTGGGACTGGGCTTaGAGCTTTGTGTATCAGTTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGWDWA*SFVYQL
Trigger: TAACTGATACACAAAGCTCCAAGCCCAGTCCCACCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGTAAGTTCCTCCAACTaGCATGCTGACTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGVSSSN*HADWML
Trigger: CAGCATCCAGTCAGCATGCCAGTTGGAGGAACTTAC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAGGTGGAGATGGAGGTaGAAGGGGGCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIRWRWR*KGALTF
Trigger: GAAAGTGAGTGCCCCCTTCCACCTCCATCTCCACCT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTCATCTACTGGAGGTaGAGGAAGAGGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLIYWR*RKREAW
Trigger: CCAGGCCTCCCTCTTCCTCCACCTCCAGTAGATGAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGGCAATGTGGGAGGTaGCAACACACCGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGQCGR*QHTGFS
Trigger: GGAAAAACCGGTGTGTTGCCACCTCCCACATTGCCC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGGCAATGTGGGAGGTaGCAACACACCGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGQCGR*QHTGFS
Trigger: GGAAAAACCGGTGTGTTGCCACCTCCCACATTGCCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
3UTR CAA 72 bp TCATGGCTCAGAGCATCAAAACCTGTGTTTTCATTATaGCGGGCAGCTTCTGTTGTTTCAACATGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SWLRASKPVFSL*RAASVVSTCQG
Trigger: ACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCAATAATGAAAACACAGGTTTTGATGCTCTGAGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTCTCTTGTATGCCCTTaGCTTCGAGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSLVCP*LRDIFL
Trigger: AAGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTCCTGATTTCCTCTTaGGCGTCCACAGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFLISS*ASTDSL
Trigger: CAGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCTTCTCCACTTTCCTaGTTTCCTCTTGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSSPLS*FPLERP
Trigger: TGGACGCTCAAGAGGAAATCAGGAAAGTGGAGAAGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTCTTCTCCACTTTCCTaGTTTCCTCTTGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSSPLS*FPLERP
Trigger: TGGACGCTCAAGAGGAAATCAGGAAAGTGGAGAAGA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCGGAAGCAGGACTTATaGAAATTCTGCTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFRKQDL*KFCLSA
Trigger: GGCAGACAAGCAGAATTTTCATAAGTCCTGCTTCCG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACGGAAGCAGGACTTATaGAAATTCTGCTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRKQDL*KFCLSA
Trigger: GGCAGACAAGCAGAATTTTCATAAGTCCTGCTTCCG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCGGAAGCAGGACTTATaGAAATTCTGCTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGRKQDL*KFCLSA
Trigger: GGCAGACAAGCAGAATTTTCATAAGTCCTGCTTCCG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGGAATAAAGTCCACTaGTCTGCTTTGGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLRNKVH*SALVFA
Trigger: TGCAAAAACCAAAGCAGATCAGTGGACTTTATTCCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAATAACATCCTCTTTCTaGCAAACATGGGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVITSSF*QTWVDC
Trigger: ACAGTCCACCCATGTTTGTCAGAAAGAGGATGTTAT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCTGCTCTTCCACCGTaGGTTGTTCTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSALPP*VVLTAP
Trigger: AGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCTGCTCTTCCACCGTaGGTTGTTCTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSALPP*VVLTAP
Trigger: AGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCAAGAAATATCCCATTaGGATAGACACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWQEISH*DRHEIS
Trigger: AGAAATCTCGTGTCTATCTCAATGGGATATTTCTTG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGGTTTGCACCTCAGGTaGTTCAATTTTATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSGLHLR*FNFISE
Trigger: CTCTGAAATAAAATTGAATCACCTGAGGTGCAAACC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAATTTCCCAGTCCCCTaGAAGCAATGGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQINFPVP*KQWVQW
Trigger: CCACTGCACCCATTGCTTTCAGGGGACTGGGAAATT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAATTTCCCAGTCCCCTaGAAGCAATGGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNFPVP*KQWVQW
Trigger: CCACTGCACCCATTGCTTTCAGGGGACTGGGAAATT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCACTGCGCACATTTCTaGTTCTTCCATCATATTAGC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIHCAHF*FFHHIS
Trigger: GCTAATATGATGGAAGAATCAGAAATGTGCGCAGTG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCAACCTGGCTGCTATaGATTGCCTCCTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPTWLL*IASCSD
Trigger: ATCTGAGCAGGAGGCAATTCATAGCAGCCAGGTTGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCCAACCTGGCTGCTATaGATTGCCTCCTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIPTWLL*IASCSD
Trigger: ATCTGAGCAGGAGGCAATTCATAGCAGCCAGGTTGG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCCTGGCTGCTTCTTaGAGTGCCAACCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFLAAS*SANLAA
Trigger: AGCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAAAGATTGAGGTGCTaGTACTACCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQRLRC*YYLSFR
Trigger: CCTGAAGGAGAGGTAGTATCAGCACCTCAATCTTTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCAAAGATTGAGGTGCTaGTACTACCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNQRLRC*YYLSFR
Trigger: CCTGAAGGAGAGGTAGTATCAGCACCTCAATCTTTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTGGGATCCAAAGATTaGGGTGCTGATACTACCTCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVGSKD*GADTTS
Trigger: AGAGGTAGTATCAGCACCTCAATCTTTGGATCCCAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGTGACCACTTTCAGGTaGCATCTTGTCAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVVTTFR*HLVKRC
Trigger: ACATCTTTTGACAAGATGTCACCTGAAAGTGGTCAC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCAACTGATGATGGCTTaGAAGTCTCTTCATATTCAC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSQLMMA*KSLHIH
Trigger: GTGAATATGAAGAGACTTTCAAGCCATCATCAGTTG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACTATATCTTGTAGTTaGTGTTTCCTTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTISCS*CFLPLA
Trigger: AGCCAGAGGAAGGAAACATCAACTACAAGATATAGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCACATCTACTGAAGTTTaGAGTACGTCAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGTSTEV*STSGGG
Trigger: TCCCCCACCTGACGTACTTCAAACTTCAGTAGATGT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAACATCTACTGAAGTTTaGAGTACGTCAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSTSTEV*STSGGG
Trigger: TCCCCCACCTGACGTACTTCAAACTTCAGTAGATGT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGATGGAATCCAATGGTTaGTTCTCAAAGATCCATCTA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWMESNG*FSKIHL
Trigger: TAGATGGATCTTTGAGAATCAACCATTGGATTCCAT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCAGGAGAGCCATTGTTaGTGGAATCCAATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFQESHC*WNPMVD
Trigger: ATCAACCATTGGATTCCATCAACAATGGCTCTCCTG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTGACATCTCCCTTATaGATTTCTTCACTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLTSPL*ISSLLV
Trigger: GACCAGCAGTGAAGAAATTCATAAGGGAGATGTCAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGCCAAGTACAAGTTTTaGCATCTCCCTTATGAATTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWAKYKF*HLPYEF
Trigger: AAATTCATAAGGGAGATGTCAAAACTTGTACTTGGC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCTTCTATGCAGGTTGTaGAAAACTGAACATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLLCRL*KTEHFL
Trigger: GAGGAAATGTTCAGTTTTTCACAACCTGCATAGAAG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGATTTACAGCCTGGCTaGGGGAATTTAGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFDLQPG*GNLGLM
Trigger: CATCAACCCTAAATTCCCTCAGCCAGGCTGTAAATC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGACCCGTTTTGTCTCCTaGTTCCAAAACATTAGATTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWTRFVS*FQNIRF
Trigger: AAATCTAATGTTTTGGAATCAGGAGACAAAACGGGT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCCTGGCTTTTCAAGTaGACATCAGTCTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSWLFK*TSVSRF
Trigger: AAAGCGGGAGACTGATGTTCACTTGAAAAGCCAGGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATGGGTTGAACCACAGTaGATTCTGAATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVWVEPQ*ILNQFQ
Trigger: CTGGAATTGATTCAGAATGCACTGTGGTTCAACCCA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCATGGCAATGTGAACTaGATATTCTCTCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWHGNVN*IFSLIF
Trigger: GAAGATAAGAGAGAATATGCAGTTCACATTGCCATG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGTGACTACGAACAGTTaGTTCATGATGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFVTTNS*FMMSCY
Trigger: GTAGCAGCTCATCATGAAGCAACTGTTCGTAGTCAC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAGAAGGGGAAGTGTTTaGTCTGTGAATTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWRRGSV*SVNFRF
Trigger: AAATCTGAAATTCACAGAGCAAACACTTCCCCTTCT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAATTGGAACCGGGGTTaGTGCTGGACATGGGATGGC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTNWNRG*CWTWDG
Trigger: GCCATCCCATGTCCAGCAGCAACCCCGGTTCCAATT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGCGGATGATTTCAACTaGATCATAACTTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLADDFN*IITFSV
Trigger: GACACTGAAAGTTATGATGCAGTTGAAATCATCCGC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCATATCTCTGTGTGTaGTCTGACAGGCGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSYLCV*SDRRGG
Trigger: GCCTCCTCGCCTGTCAGAGCACACACAGAGATATGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGAGCAGATCCTGGGCTaGTTAACAGGAATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFEQILG*LTGIFS
Trigger: AGAAAAGATTCCTGTTAAGCAGCCCAGGATCTGCTC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAGTCACAGCCAGATTTaGCAGCTTCTGAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSHSQI*QLLSYV
Trigger: CACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAGTTGCAGAAGCATCTaGGGTTGCATATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFISCRSI*GCISQA
Trigger: GGCCTGGGATATGCAACCGCAGATGCTTCTGCAACT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAGCTTCACTTATAAATaGAGATTCCTCTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSFTYK*RFLLEG
Trigger: ACCTTCCAAGAGGAATCTGCATTTATAAGTGAAGCT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCTCAAATCATTCCTTTaGCCTTCACTGTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILKSFL*PSLLPA
Trigger: TGCTGGTAACAGTGAAGGGCAAAGGAATGATTTGAG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTCACTCGGCCTATCTTaGACATTCTTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSLGLS*TFFLPS
Trigger: GGAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTGTGTTTTCATTATTaGGGGCAGCTTCTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLCFHY*GQLLLF
Trigger: AAACAACAGAAGCTGCCCGCAATAATGAAAACACAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTGTTTCTTTTAATCTaGTCTTCCACCGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLFLLI*SSTVSC
Trigger: ACAACTCACGGTGGAAGAGCAGATTAAAAGAAACAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCATCAATATCTCTCAGTaGCTAAGTGTGGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIINISQ*LSVDCQ
Trigger: CTGACAGTCCACACTTAGGCACTGAGAGATATTGAT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTGGCTGCTATGAATTaGCTCCTGCTCAGATCTGTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLAAMN*LLLRSV
Trigger: AACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCTGGCTGCTATGAATTaGCTCCTGCTCAGATCTGTT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLAAMN*LLLRSV
Trigger: AACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTGAGGGAGCCCTTCTaGATTGGGAACATGGATGGG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLREPF*IGNMDG
Trigger: CCCATCCATGTTCCCAATGCAGAAGGGCTCCCTCAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAGGCGCAAGCAATTTaGTTTCCTGAGGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQAQAI*FPEAGK
Trigger: TTTTCCAGCCTCAGGAAAGCAAATTGCTTGCGCCTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATACATACCGGGCTTGTTaGACATCTGCTGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNTYRAC*TSAETE
Trigger: TTCAGTCTCAGCAGATGTGCAACAAGCCCGGTATGT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCACATACCGGGCTTGTTaGACATCTGCTGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFTYRAC*TSAETE
Trigger: TTCAGTCTCAGCAGATGTGCAACAAGCCCGGTATGT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTTCTTGATCAGCAATaGCCCTGGAAATATCACCTT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSFLDQQ*PWKYHL
Trigger: AAGGTGATATTTCCAGGGGCATTGCTGATCAAGAAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTACATCCACCGAGCTGTaGAGACATCTCCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQITSTEL*RHLLWL
Trigger: TAGCCAGAGGAGATGTCTGCACAGCTCGGTGGATGT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAAAAGCCACACAGCCTaGTTAACATCACCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFKSHTA*LTSPFC
Trigger: GCAGAAAGGTGATGTTAAGCAGGCTGTGTGGCTTTT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTCTCCCGAGGATCCTaGCATCACAGCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLSRGS*HHSFSI
Trigger: GATGCTAAAGCTGTGATGGCAGGATCCTCGGGAGAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTCTCCCGAGGATCCTaGCATCACAGCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLSRGS*HHSFSI
Trigger: GATGCTAAAGCTGTGATGGCAGGATCCTCGGGAGAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTGACTGAGAGTATCTaGTCCCCCTTGCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILTESI*SPLPLG
Trigger: GCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTGACTGAGAGTATCTaGTCCCCCTTGCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFILTESI*SPLPLG
Trigger: GCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTGACTGAGAGTATCTaGTCCCCCTTGCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLTESI*SPLPLG
Trigger: GCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCCGCTTTTTGTTGGTTaGCTTAAATGTATTGTGACT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWPLFVG*LKCIVT
Trigger: AGTCACAATACATTTAAGGCAACCAACAAAAAGCGG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTTTGGGAATATTGTTaGATGAAGTCTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSFWEYC*MKSPLC
Trigger: GCACAGTGGAGACTTCATGCAACAATATTCCCAAAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATTACTTTGAGAGCCTaGGCTGGGTTGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFITLRA*AGLNHS
Trigger: ACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAAT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGATGTTGTGGAGAGTTaGTTATCAGAACACACTCCT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIDVVES*LSEHTP
Trigger: AGGAGTGTGTTCTGATAACCAACTCTCCACAACATC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGCTGCTAAAACATGGTaGAGCCTCTTGGCAGCGACT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRAAKTW*SLLAAT
Trigger: AGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGAAGCTGCTAAAACATaGTGGAGCCTCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYREAAKT*WSLLAA
Trigger: CGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGAAATTGGTTTGCTTTaGGGCAAGTGCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSEIGLL*GKCNCS
Trigger: GGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGAAATTTGGGGAAATTaGTTTGCTTTGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIEIWGN*FALGQV
Trigger: CACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCCGGTTTTCCTGTTTTaGAGGACATCATGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFPVFLF*RTSWLS
Trigger: AGACAGCCATGATGTCCTCCAAAACAGGAAAACCGG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATATGGGATGGCCCCTTTaGATAACTTTGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNMGWPL*ITLQWC
Trigger: ACACCACTGCAAAGTTATCCAAAGGGGCCATCCCAT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATGGGATGGCCCCTTTaGATAACTTTGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSMGWPL*ITLQWC
Trigger: ACACCACTGCAAAGTTATCCAAAGGGGCCATCCCAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCCTCTTCTCTACAATTaGAACCGGGGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIPLLYN*NRGCCW
Trigger: CCAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATCCTCATAGGTTGGTaGGGCATGCTTGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFILIGW*GMLEVT
Trigger: TGTGACTTCAAGCATGCCCCACCAACCTATGAGGAT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATCCTCATAGGTTGGTaGGGCATGCTTGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSILIGW*GMLEVT
Trigger: TGTGACTTCAAGCATGCCCCACCAACCTATGAGGAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTATTCCTCTTGGAAGGTaGTTCTCATCTCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFIPLGR*FSSQLQ
Trigger: CTGCAACTGAGATGAGAACCACCTTCCAAGAGGAAT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTACTGTTGCAATGGTaGCATCGGAAGCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLLLQW*HRKQDL
Trigger: TAAGTCCTGCTTCCGATGCCACCATTGCAACAGTAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGCTGAGGCTTGGTTTTaGAGCAGGCTGCACAGGACT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTAEAWF*SRLHRT
Trigger: AGTCCTGTGCAGCCTGCTCCAAAACCAAGCCTCAGC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTTAGCTGTACATTCATaGCTCAGAGCATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLAVHS*LRASKP
Trigger: AGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTAGCTGTACATTCATaGCTCAGAGCATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLAVHS*LRASKP
Trigger: AGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATTGTTTCTTCACCTTaGCCAAACCACCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSIVSSP*PNHQAL
Trigger: CAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGCCGACCATATTCCCTaGTGTTGTTACTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSADHIP*CCYSCP
Trigger: TGGACAAGAGTAACAACACCAGGGAATATGGTCGGC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGCTCATCAAGGGCAATaGAAAAGCGTTCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSAHQGQ*KSVQSC
Trigger: GCAGGATTGAACGCTTTTCCATTGCCCTTGATGAGC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGCTCATCAAGGGCAATaGAAAAGCGTTCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGAHQGQ*KSVQSC
Trigger: GCAGGATTGAACGCTTTTCCATTGCCCTTGATGAGC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGTGACTCTTAAAAGCTaGCGAGCACAAACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGVTLKS*RAQTSL
Trigger: GAGCGAAGTTTGTGCTCGCCAGCTTTTAAGAGTCAC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTTCCTTCCTCTGGCTaGTTGAAACGCAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFPSSG*LKRKKW
Trigger: CCACTTCTTGCGTTTCAACCAGCCAGAGGAAGGAAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTCCTTCCTCTGGCTaGTTGAAACGCAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFPSSG*LKRKKW
Trigger: CCACTTCTTGCGTTTCAACCAGCCAGAGGAAGGAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGTGTGTCGATGGGTTaGGTTTCAAACATCCATGTG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSVSMG*VSNIHV
Trigger: CACATGGATGTTTGAAACCCAACCCATCGACACACT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTAATTTCCAGCATTTaGCCCGAACCATCTCTAATA +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLISSI*PEPSLI
Trigger: TATTAGAGATGGTTCGGGCCAAATGCTGGAAATTAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTGAATGGCATACAGTaGTGTTGTCTCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILNGIQ*CCLEER
Trigger: TCTCTCTTCGAGACAACACCACTGTATGCCATTCAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCATGCTTTCATCAAACTaGTCAATGGGCCTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSMLSSN*SMGLVS
Trigger: TGAAACAAGGCCCATTGACCAGTTTGATGAAAGCAT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATGCTTTCATCAAACTaGTCAATGGGCCTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLMLSSN*SMGLVS
Trigger: TGAAACAAGGCCCATTGACCAGTTTGATGAAAGCAT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACGAACATCCCCACCTTaGATCTCCTCCTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRTSPP*ISSCFT
Trigger: TGTAAAACAGGAGGAGATCCAAGGTGGGGATGTTCG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAAATGGACCTGGCTTTaGCTGAAGAAGACTATTTTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWKWTWL*LKKTIF
Trigger: AAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTGGCTCAAATGGACCTaGCTTTGGCTGAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGWLKWT*LWLKKT
Trigger: AGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGGCTCAAATGGACCTaGCTTTGGCTGAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSWLKWT*LWLKKT
Trigger: AGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTGCCACTTGGCCGCTaGCTCAAATGGACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLPLGR*LKWTWL
Trigger: AAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCTACTAAATTGCCATaGCAAGATTTCCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSTKLP*QDFPIV
Trigger: AACTATGGGGAAATCTTGCCATGGCAATTTAGTAGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGCCTTTGGGGGCTTTTaGAAGATTAACCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFAFGGF*KINLSS
Trigger: AGAACTGAGGTTAATCTTCCAAAAGCCCCCAAAGGC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAAACCCTCCATTTTCTaGTGGTCATTTCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLKPSIF*WSFLSS
Trigger: TGAACTGAGAAATGACCACCAGAAAATGGAGGGTTT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGATGCTGGGTGGGACTaGGCTTGGAGCTTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKDAGWD*AWSFVY
Trigger: ATACACAAAGCTCCAAGCCCAGTCCCACCCAGCATC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAGGGTTAAAGTTGATTaGATTCAAGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWRVKVD*IQGPFH
Trigger: ATGGAAAGGTCCTTGAATCCAATCAACTTTAACCCT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGGTGGAGATGGAGGTaGAAGGGGGCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTRWRWR*KGALTF
Trigger: GAAAGTGAGTGCCCCCTTCCACCTCCATCTCCACCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGAAAGGAGATGTGCTaGCTTTTGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGKEMC*LLRWSW
Trigger: CCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
3UTR CAA 72 bp CAGCAGCTGCTCTGTCAGTCTGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAATAAGTCTTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: QQLLCQSVSSEP*LVHSSNKSFQI
Trigger: AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGACTGACAGAGCAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTTACATTCCATATCTaGCAGGGAGGTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFTFHI*QGGCQF
Trigger: GAACTGGCAACCTCCCTGTCAGATATGGAATGTAAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTTACATTCCATATCTaGCAGGGAGGTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFTFHI*QGGCQF
Trigger: GAACTGGCAACCTCCCTGTCAGATATGGAATGTAAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCCTGGAACTGTGTGTaGGAGACAGTTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSWNCV*ETVCRV
Trigger: GACTCTGCAAACTGTCTCTCACACACAGTTCCAGGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACTCTCTGGAAATGAATaGGATTTTATAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLSGNE*DFIRGA
Trigger: TGCGCCTCTTATAAAATCTCATTCATTTCCAGAGAG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCTCTCTGGAAATGAATaGGATTTTATAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILSGNE*DFIRGA
Trigger: TGCGCCTCTTATAAAATCTCATTCATTTCCAGAGAG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGACGACCTTTGGTGCTaGTTTATTCTTCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFDDLWC*FILQMF
Trigger: GAACATCTGAAGAATAAATCAGCACCAAAGGTCGTC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTCTCTTGTATGCCCTTaGCTTCGAGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISLVCP*LRDIFL
Trigger: AAGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTTTTAGGGGACTaGGAAAGCTCGTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSFLGD*ESSFLV
Trigger: TACTAAGAACGAGCTTTCTCAGTCCCCTAAAAAGGA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTGTCGGGCACCATGTaGTCAGTGGAATTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVSGTM*SVEFSP
Trigger: TGGACTAAATTCCACTGATCACATGGTGCCCGACAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTGCAACCTTGCGGATaGTTTCAACTGCATCATAAC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLQPCG*FQLHHN
Trigger: GTTATGATGCAGTTGAAATCATCCGCAAGGTTGCAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCTGCTCTTCCACCGTaGGTTGTTCTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSALPP*VVLTAP
Trigger: AGGTGCAGTCAGAACAACTCACGGTGGAAGAGCAGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCAAGAAATATCCCATTaGGATAGACACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSQEISH*DRHEIS
Trigger: AGAAATCTCGTGTCTATCTCAATGGGATATTTCTTG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACAGCAGTCGCTTTTATaGTATTTAGGTTTAACCCCA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVQQSLL*YLGLTP
Trigger: TGGGGTTAAACCTAAATATCATAAAAGCGACTGCTG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACCAACCTGGCTGCTATaGATTGCCTCCTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTPTWLL*IASCSD
Trigger: ATCTGAGCAGGAGGCAATTCATAGCAGCCAGGTTGG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGAGGAAGTGACACTGTaGTCACTATATCTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVEEVTL*SLYLVV
Trigger: AACTACAAGATATAGTGATCACAGTGTCACTTCCTC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCCAGAGTTGAGGAAGTaGCACTGTGATCACTATATC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFPELRK*HCDHYI
Trigger: GATATAGTGATCACAGTGTCACTTCCTCAACTCTGG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAATTTGTGCCAGAGTTaGGGAAGTGACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNNLCQS*GSDTVI
Trigger: GATCACAGTGTCACTTCCTCAACTCTGGCACAAATT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAATTTGTGCCAGAGTTaGGGAAGTGACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSNLCQS*GSDTVI
Trigger: GATCACAGTGTCACTTCCTCAACTCTGGCACAAATT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATGGAATCCAATGGTTaGTTCTCAAAGATCCATCTA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLMESNG*FSKIHL
Trigger: TAGATGGATCTTTGAGAATCAACCATTGGATTCCAT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCATCACCACCAGCAATaGTTTCTTGATCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGHHHQQ*FLDQQC
Trigger: GCATTGCTGATCAAGAAATCATTGCTGGTGGTGATG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATATGAACCTCATCCACTaGATGAAGCTGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNMNLIH*MKLSKL
Trigger: CAACTTGGACAGCTTCATTCAGTGGATGAGGTTCAT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCTCTTCTGACTCTTTaGTTTTCTCCAAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPLLTL*FSPKVG
Trigger: CCCAACCTTTGGAGAAAATCAAAGAGTCAGAAGAGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGCCATGTGGTTGTTTTaGCATCAGAAGGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFAMWLF*HQKEGF
Trigger: AAATCCCTCCTTCTGATGTCAAAACAACCACATGGC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTATGAATGGTACGTTTaGCATCACCACCTATTACTT +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSYEWYV*HHHLLL
Trigger: AAGTAATAGGTGGTGATGTCAAACGTACCATTCATA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTTCCAGGTCATCTTTaGGAAGCTCCTTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFPGHL*EAPFSE
Trigger: TTCTGAAAAAGGAGCTTCTCAAAGATGACCTGGAAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTTCCAGGTCATCTTTaGGAAGCTCCTTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFPGHL*EAPFSE
Trigger: TTCTGAAAAAGGAGCTTCTCAAAGATGACCTGGAAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGACCTGGCTTTGGCTaGAGAAGACTATTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGPGFG*RRLFLF
Trigger: GAACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACCCGTTTTGTCTCCTaGTTCCAAAACATTAGATTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTRFVS*FQNIRF
Trigger: AAATCTAATGTTTTGGAATCAGGAGACAAAACGGGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTTCTGAAAGTCCCCTaGAAGGTCGTAAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLLKVP*KVVSSS
Trigger: GGAGGAACTTACGACCTTTCAGGGGACTTTCAGAAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCTTCTGAAAGTCCCCTaGAAGGTCGTAAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILLKVP*KVVSSS
Trigger: GGAGGAACTTACGACCTTTCAGGGGACTTTCAGAAG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGCTGCCACATTGGTTaGAGGTTTATATTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSCHIG*RFIFFF
Trigger: GAAAAAGAATATAAACCTTCAACCAATGTGGCAGCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCTCCGTGTGTTCACTaGTGGTCATCACCATTACTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSPCVH*WSSPLL
Trigger: AAGTAATGGTGATGACCAGCAGTGAACACACGGAGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTACTAATAACGTTCTaGTTTGTCTCCGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLLITF*FVSVCS
Trigger: TGAACACACGGAGACAAAGCAGAACGTTATTAGTAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGGGGCAAGTGCAACTaGTCCAAATACTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSWGKCN*SKYFFC
Trigger: ACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTGCTTTGGGGCAAGTaGAACTGCTCCAAATACTTC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLLWGK*NCSKYF
Trigger: GAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTGCTTTGGGGCAAGTaGAACTGCTCCAAATACTTC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLLWGK*NCSKYF
Trigger: GAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTGCTTTGGGGCAAGTaGAACTGCTCCAAATACTTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLLWGK*NCSKYF
Trigger: GAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGCATCGATAACCTTTTaGTTGACGACCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSASITF*LTTFGA
Trigger: AGCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGACATTTTTCTTCCTaGAGACTATTATATGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLRHFSS*RLLYGW
Trigger: CCAGCCATATAATAGTCTGCAGGAAGAAAAATGTCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCTCGACAAAATCTGTTaGAGTTCTTCACGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILDKIC*SSSRFL
Trigger: GAGAAAACGTGAAGAACTGCAACAGATTTTGTCGAG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACTCGACAAAATCTGTTaGAGTTCTTCACGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLDKIC*SSSRFL
Trigger: GAGAAAACGTGAAGAACTGCAACAGATTTTGTCGAG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGCTTCATGATGAGCTaGTACTTGGTGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSCFMMS*YLVLYC
Trigger: ACAGTACAGCACCAAGTAGCAGCTCATCATGAAGCA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGTGACTACGAACAGTTaGTTCATGATGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFVTTNS*FMMSCY
Trigger: GTAGCAGCTCATCATGAAGCAACTGTTCGTAGTCAC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGCGGATGATTTCAACTaGATCATAACTTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIADDFN*IITFSV
Trigger: GACACTGAAAGTTATGATGCAGTTGAAATCATCCGC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCAGAAACTGGGCCATaGTCAAATTCCCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSETGP*SNSLNH
Trigger: ATGGTTCAGGGAATTTGAGCATGGCCCAGTTTCTGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGAGCAGATCCTGGGCTaGTTAACAGGAATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFEQILG*LTGIFS
Trigger: AGAAAAGATTCCTGTTAAGCAGCCCAGGATCTGCTC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGAGCAGATCCTGGGCTaGTTAACAGGAATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSEQILG*LTGIFS
Trigger: AGAAAAGATTCCTGTTAAGCAGCCCAGGATCTGCTC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTCAAATGCATCCATaGCTGAGAAATGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSQMHP*LRNVHL
Trigger: TAAGTGAACATTTCTCAGGCATGGATGCATTTGAGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAGAAGCATCTGCGGTTaGATATCCCAGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGRSICG*ISQAFK
Trigger: TTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGAAGCATCTGCGGTTaGATATCCCAGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRSICG*ISQAFK
Trigger: TTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGTTGCAGAAGCATCTaGGGTTGCATATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSCRSI*GCISQA
Trigger: GGCCTGGGATATGCAACCGCAGATGCTTCTGCAACT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGGTTCTCATCTCAGTTaGAGAAGCATCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIGSHLS*RSICGC
Trigger: GCAACCGCAGATGCTTCTGCAACTGAGATGAGAACC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGTTCTCATCTCAGTTaGAGAAGCATCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGSHLS*RSICGC
Trigger: GCAACCGCAGATGCTTCTGCAACTGAGATGAGAACC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGCTTCACTTATAAATaGAGATTCCTCTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSFTYK*RFLLEG
Trigger: ACCTTCCAAGAGGAATCTGCATTTATAAGTGAAGCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTCAAATCATTCCTTTaGCCTTCACTGTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLKSFL*PSLLPA
Trigger: TGCTGGTAACAGTGAAGGGCAAAGGAATGATTTGAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGGACTGCCAGCAGCTaGTCTGTCAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRTASS*SVSLFL
Trigger: AAGAAACAGACTGACAGAGCAGCTGCTGGCAGTCCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAGGACTGCCAGCAGCTaGTCTGTCAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIRTASS*SVSLFL
Trigger: AAGAAACAGACTGACAGAGCAGCTGCTGGCAGTCCT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCTGTTTCTTTTAATCTaGTCTTCCACCGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILFLLI*SSTVSC
Trigger: ACAACTCACGGTGGAAGAGCAGATTAAAAGAAACAG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAGTGCCAACCTGGCTaGTATGAATTGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRKCQPG*YELPPA
Trigger: AGCAGGAGGCAATTCATAGCAGCCAGGTTGGCACTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAAGTGCCAACCTGGCTaGTATGAATTGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKKCQPG*YELPPA
Trigger: AGCAGGAGGCAATTCATAGCAGCCAGGTTGGCACTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGCTGCTTCTTGAAGTaGCAACCTGGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGCFLK*QPGCYE
Trigger: TTCATAGCAGCCAGGTTGGCACTTCAAGAAGCAGCC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGGCTGCTTCTTGAAGTaGCAACCTGGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIGCFLK*QPGCYE
Trigger: TTCATAGCAGCCAGGTTGGCACTTCAAGAAGCAGCC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGCTGCTTCTTGAAGTaGCAACCTGGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGCFLK*QPGCYE
Trigger: TTCATAGCAGCCAGGTTGGCACTTCAAGAAGCAGCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTGAGGGAGCCCTTCTaGATTGGGAACATGGATGGG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLREPF*IGNMDG
Trigger: CCCATCCATGTTCCCAATGCAGAAGGGCTCCCTCAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACAAGATTCCCATTTCTaGCTCAGGAGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKQDSHF*LRRLRE
Trigger: CTCCCTCAACCTCCTGAGGCAGAAATGGGAATCTTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGCGTTCAATCCTaGGCCGACTGCTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRKSVQS*ADCSGN
Trigger: ATTCCCTGAGCAGTCGGCGCAGGATTGAACGCTTTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACAGTCGCTTCAAAGATaGGGCTGTGACCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKQSLQR*GCDHFQ
Trigger: CTGAAAGTGGTCACAGCCGCATCTTTGAAGCGACTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTTCAGTCTTAATCTaGTTGGCTGGGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLSVLI*LAGVVI
Trigger: GATGACAACCCCAGCCAAGCAGATTAAGACTGAAAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACATCCACCGAGCTGTaGAGACATCTCCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTSTEL*RHLLWL
Trigger: TAGCCAGAGGAGATGTCTGCACAGCTCGGTGGATGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCTCGGTCTTGAATTaGATAGAGTGGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFSVLN*IEWLGF
Trigger: GAAACCCAGCCACTCTATGCAATTCAAGACCGAGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAAAAGCCACACAGCCTaGTTAACATCACCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNKSHTA*LTSPFC
Trigger: GCAGAAAGGTGATGTTAAGCAGGCTGTGTGGCTTTT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTACCTTAACTGTGTTATaGACATCTCCAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFTLTVL*TSPGMM
Trigger: CATCATCCCTGGAGATGTGCATAACACAGTTAAGGT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAGTTCATATGTCTGTTaGTTTCCAACGGTTTTACCA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSSYVC*FPTVLP
Trigger: TGGTAAAACCGTTGGAAAGCAACAGACATATGAACT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGTTCATATGTCTGTTaGTTTCCAACGGTTTTACCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSSYVC*FPTVLP
Trigger: TGGTAAAACCGTTGGAAAGCAACAGACATATGAACT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATGAAGTCTCCACTGTaGTTTTCCGGAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRMKSPL*FSGAEE
Trigger: CTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTCAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTTTGGGAATATTGTTaGATGAAGTCTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFWEYC*MKSPLC
Trigger: GCACAGTGGAGACTTCATGCAACAATATTCCCAAAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTTGCCAGTTCAACTTTaGGGGAAAAATCGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLPVQL*GKNRSY
Trigger: ATAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGATGTTGTGGAGAGTTaGTTATCAGAACACACTCCT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFDVVES*LSEHTP
Trigger: AGGAGTGTGTTCTGATAACCAACTCTCCACAACATC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGCAGCGACTGTTTCTaGCGATGTTGTGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGSDCF*RCCGEL
Trigger: CAACTCTCCACAACATCGCCAGAAACAGTCGCTGCC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGAAGCTGCTAAAACATaGTGGAGCCTCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTEAAKT*WSLLAA
Trigger: CGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAAGGCCACTTTTATTTaGCTCTGCTTCAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLKATFI*LCFKLF
Trigger: AAACAGTTTGAAGCAGAGCCAAATAAAAGTGGCCTT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCATGGGCCTTCTTGGTaGGGGTTCAACATAACTGTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHGPSW*GFNITV
Trigger: GACAGTTATGTTGAACCCCCACCAAGAAGGCCCATG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAGATTTTTGCGACATaGGCCTTCTTGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQIFAT*AFLVGV
Trigger: AACCCCCACCAAGAAGGCCCATGTCGCAAAAATCTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACAGATTTTTGCGACATaGGCCTTCTTGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKQIFAT*AFLVGV
Trigger: AACCCCCACCAAGAAGGCCCATGTCGCAAAAATCTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTGCTGGACATGGGATaGCCCCTTTGGATAACTTTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLLDMG*PLWITL
Trigger: CAAAGTTATCCAAAGGGGCCATCCCATGTCCAGCAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATATTGTGATTGTAGGTaGAGAGTCCCTACCACGAGT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSYCDCR*RVPTTS
Trigger: ACTCGTGGTAGGGACTCTCCACCTACAATCACAATA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTGAACAGTTCGGTTaGCCGCTTCATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFEQFG*PLHISV
Trigger: CACAGAGATATGAAGCGGCCAACCGAACTGTTCAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCTTTGCTTCAGAAACTaGGCCATGCTCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNLCFRN*AMLKFP
Trigger: AGGGAATTTGAGCATGGCCCAGTTTCTGAAGCAAAG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTTGCTTCAGAAACTaGGCCATGCTCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLCFRN*AMLKFP
Trigger: AGGGAATTTGAGCATGGCCCAGTTTCTGAAGCAAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGACATCCTCATAGGTTaGTGGGGCATGCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIDILIG*WGMLEV
Trigger: GACTTCAAGCATGCCCCACCAACCTATGAGGATGTC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATATTCCTCTTGGAAGGTaGTTCTCATCTCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNIPLGR*FSSQLQ
Trigger: CTGCAACTGAGATGAGAACCACCTTCCAAGAGGAAT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATTCCTCTTGGAAGGTaGTTCTCATCTCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSIPLGR*FSSQLQ
Trigger: CTGCAACTGAGATGAGAACCACCTTCCAAGAGGAAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACATATTTCCTTGTCTTaGAGCAGCAGCTTCACTTAT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVHISLS*SSSFTY
Trigger: ATAAGTGAAGCTGCTGCTCCAAGACAAGGAAATATG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCATATTTCCTTGTCTTaGAGCAGCAGCTTCACTTAT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIHISLS*SSSFTY
Trigger: ATAAGTGAAGCTGCTGCTCCAAGACAAGGAAATATG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTACTGTTGCAATGGTaGCATCGGAAGCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNLLLQW*HRKQDL
Trigger: TAAGTCCTGCTTCCGATGCCACCATTGCAACAGTAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTACTGTTGCAATGGTaGCATCGGAAGCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLLLQW*HRKQDL
Trigger: TAAGTCCTGCTTCCGATGCCACCATTGCAACAGTAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCTGACAAACATGGGTaGACTGTAGATAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSDKHG*TVDKAA
Trigger: TGCAGCCTTATCTACAGTCCACCCATGTTTGTCAGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTCTTGCCATTTCCTaGCTGCTTCTTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFLAIS*LLLEVP
Trigger: TGGCACTTCAAGAAGCAGCCAGGAAATGGCAAGAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTTCTTGCCATTTCCTaGCTGCTTCTTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFLAIS*LLLEVP
Trigger: TGGCACTTCAAGAAGCAGCCAGGAAATGGCAAGAAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTTAGTCGAAACCTTTaGAATCTCTTCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLSRNL*NLFILR
Trigger: CCTGAGGATGAAGAGATTCCAAAGGTTTCGACTAAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCTGCATTGGGAACATaGATGGGTCCAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSALGT*MGPGCP
Trigger: AGGACAACCTGGACCCATCCATGTTCCCAATGCAGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGCAGTTCAGGGGACTaGGAAAATGCTGTCACATCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGSSGD*ENAVTS
Trigger: AGATGTGACAGCATTTTCCCAGTCCCCTGAACTGCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAGTGTGTCGATGGGTTaGGTTTCAAACATCCATGTG +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSVSMG*VSNIHV
Trigger: CACATGGATGTTTGAAACCCAACCCATCGACACACT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCCCCAAGTGTGTCGATaGGTTGGGTTTCAAACATCC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIPQVCR*VGFQTS
Trigger: GGATGTTTGAAACCCAACCCATCGACACACTTGGGG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCCCAAGTGTGTCGATaGGTTGGGTTTCAAACATCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPQVCR*VGFQTS
Trigger: GGATGTTTGAAACCCAACCCATCGACACACTTGGGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACATCCAACACTTTCTaGAGACATCTGTACCTATTA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTSNTF*RHLYLL
Trigger: TAATAGGTACAGATGTCTCCAGAAAGTGTTGGATGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAGAATGTCTAATGGCTaGGTTTCAAACATCCAACAC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIRMSNG*VSNIQH
Trigger: GTGTTGGATGTTTGAAACCCAGCCATTAGACATTCT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCAAGGGGATCTTGAATaGCATACAGTGGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNQGDLE*HTVVLS
Trigger: AGACAACACCACTGTATGCCATTCAAGATCCCCTTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCAAGGGGATCTTGAATaGCATACAGTGGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFQGDLE*HTVVLS
Trigger: AGACAACACCACTGTATGCCATTCAAGATCCCCTTG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCATTTATACCTCATGCTaGAAACATCTCCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSIYTSC*KHLQLV
Trigger: TACAAGCTGGAGATGTTTCCAGCATGAGGTATAAAT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGATTCTTTCCATCGATaGCTTGATTCTTTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLDSFHR*LDSLSD
Trigger: GTCACTTAAAGAATCAAGCCATCGATGGAAAGAATC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTCTACTAAATTGCCATaGCAAGATTTCCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSTKLP*QDFPIV
Trigger: AACTATGGGGAAATCTTGCCATGGCAATTTAGTAGA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAAACCCTCCATTTTCTaGTGGTCATTTCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIKPSIF*WSFLSS
Trigger: TGAACTGAGAAATGACCACCAGAAAATGGAGGGTTT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGGGTGGGACTGGGCTTaGAGCTTTGTGTATCAGTTA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIGWDWA*SFVYQL
Trigger: TAACTGATACACAAAGCTCCAAGCCCAGTCCCACCC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGGTGGGACTGGGCTTaGAGCTTTGTGTATCAGTTA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGWDWA*SFVYQL
Trigger: TAACTGATACACAAAGCTCCAAGCCCAGTCCCACCC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTAAGTTCCTCCAACTaGCATGCTGACTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVSSSN*HADWML
Trigger: CAGCATCCAGTCAGCATGCCAGTTGGAGGAACTTAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATTTCTGTTACATTaGATGTGTCTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSFLLH*MCLALQ
Trigger: CTGTAGAGCAAGACACATCCAATGTAACAGAAATGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGGAAGAGGGAGGCCTaGAAAACTTTCAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRKREA*KTFKFS
Trigger: GCTGAATTTGAAAGTTTTCCAGGCCTCCCTCTTCCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGGAAGAGGGAGGCCTaGAAAACTTTCAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNRKREA*KTFKFS
Trigger: GCTGAATTTGAAAGTTTTCCAGGCCTCCCTCTTCCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTATCTTTTATATGCTTaGGAAGTTTGGGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLYLLYA*EVWVWA
Trigger: TGCCCAAACCCAAACTTCCCAAGCATATAAAAGATA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCCTGGAACTGTGTGTaGGAGACAGTTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSWNCV*ETVCRV
Trigger: GACTCTGCAAACTGTCTCTCACACACAGTTCCAGGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGACGACCTTTGGTGCTaGTTTATTCTTCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSDDLWC*FILQMF
Trigger: GAACATCTGAAGAATAAATCAGCACCAAAGGTCGTC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTCTCCATGGCAATGTaGACTGCATATTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFSMAM*TAYSLL
Trigger: TAAGAGAGAATATGCAGTTCACATTGCCATGGAGAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTCCTTTTTAGGGGACTaGGAAAGCTCGTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGSFLGD*ESSFLV
Trigger: TACTAAGAACGAGCTTTCTCAGTCCCCTAAAAAGGA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTCCTTTTTAGGGGACTaGGAAAGCTCGTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSFLGD*ESSFLV
Trigger: TACTAAGAACGAGCTTTCTCAGTCCCCTAAAAAGGA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTCCTGATTTCCTCTTaGGCGTCCACAGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFLISS*ASTDSL
Trigger: CAGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCTTCTCCACTTTCCTaGTTTCCTCTTGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISSPLS*FPLERP
Trigger: TGGACGCTCAAGAGGAAATCAGGAAAGTGGAGAAGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAAATATGTCCAGCAATaGCATCCTCATAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGKYVQQ*HPHRLV
Trigger: CACCAACCTATGAGGATGTCATTGCTGGACATATTT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAAATATGTCCAGCAATaGCATCCTCATAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSKYVQQ*HPHRLV
Trigger: CACCAACCTATGAGGATGTCATTGCTGGACATATTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACGGAAGCAGGACTTATaGAAATTCTGCTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKRKQDL*KFCLSA
Trigger: GGCAGACAAGCAGAATTTTCATAAGTCCTGCTTCCG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCGGAAGCAGGACTTATaGAAATTCTGCTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRKQDL*KFCLSA
Trigger: GGCAGACAAGCAGAATTTTCATAAGTCCTGCTTCCG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGGAATAAAGTCCACTaGTCTGCTTTGGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFRNKVH*SALVFA
Trigger: TGCAAAAACCAAAGCAGATCAGTGGACTTTATTCCT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATAACATCCTCTTTCTaGCAAACATGGGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSITSSF*QTWVDC
Trigger: ACAGTCCACCCATGTTTGTCAGAAAGAGGATGTTAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCACTGCGCACATTTCTaGTTCTTCCATCATATTAGC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNHCAHF*FFHHIS
Trigger: GCTAATATGATGGAAGAATCAGAAATGTGCGCAGTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTGTGCTTTTCAAGATaGGAGACCATTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVCFSR*ETISVP
Trigger: TGGAACAGAAATGGTCTCTCATCTTGAAAAGCACAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGTGTGCTTTTCAAGATaGGAGACCATTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFVCFSR*ETISVP
Trigger: TGGAACAGAAATGGTCTCTCATCTTGAAAAGCACAC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACAAAGATTGAGGTGCTaGTACTACCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKQRLRC*YYLSFR
Trigger: CCTGAAGGAGAGGTAGTATCAGCACCTCAATCTTTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTGGGATCCAAAGATTaGGGTGCTGATACTACCTCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVGSKD*GADTTS
Trigger: AGAGGTAGTATCAGCACCTCAATCTTTGGATCCCAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTGGGATCCAAAGATTaGGGTGCTGATACTACCTCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVGSKD*GADTTS
Trigger: AGAGGTAGTATCAGCACCTCAATCTTTGGATCCCAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTGACCACTTTCAGGTaGCATCTTGTCAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVTTFR*HLVKRC
Trigger: ACATCTTTTGACAAGATGTCACCTGAAAGTGGTCAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTCCTCTGGCTGGTTaGAACGCAAGAAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLPLAG*NARSGR
Trigger: TCTTCCACTTCTTGCGTTTCAACCAGCCAGAGGAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGAGGAAGTGACACTGTaGTCACTATATCTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFEEVTL*SLYLVV
Trigger: AACTACAAGATATAGTGATCACAGTGTCACTTCCTC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCAGCAATGATTTCTTaGTCAGCAATGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPAMIS*SAMPLE
Trigger: TTCCAGGGGCATTGCTGATCAAGAAATCATTGCTGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCATGCATTTTATTCATTaGGTCCAATGGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIMHFIH*VQWPCF
Trigger: GAAACAAGGCCATTGGACTCAATGAATAAAATGCAT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTACTGATAGTTACCGCTaGTTCTTCTTGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFTDSYR*FFLTLM
Trigger: CATCAAAGTCAAGAAGAATCAGCGGTAACTATCAGT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTACTCACCCCACCTTTaGCATTTTCTTCCATGGATA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFYSPHL*HFLPWI
Trigger: TATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTACTCACCCCACCTTTaGCATTTTCTTCCATGGATA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNYSPHL*HFLPWI
Trigger: TATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATACTCACCCCACCTTTaGCATTTTCTTCCATGGATA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSYSPHL*HFLPWI
Trigger: TATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATGGTATCAAGTGGCTaGGTTTCAAAGAGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFMVSSG*VSKSQV
Trigger: TACTTGGCTCTTTGAAACTCAGCCACTTGATACCAT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTACCAAATGTACTCTaGGGCTCGGTCATAAAAACC +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLPNVL*GSVIKT
Trigger: GGTTTTTATGACCGAGCCTCAGAGTACATTTGGTAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTACCAAATGTACTCTaGGGCTCGGTCATAAAAACC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLPNVL*GSVIKT
Trigger: GGTTTTTATGACCGAGCCTCAGAGTACATTTGGTAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGATTTACAGCCTGGCTaGGGGAATTTAGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRDLQPG*GNLGLM
Trigger: CATCAACCCTAAATTCCCTCAGCCAGGCTGTAAATC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTCCAGGTCATCTTTaGGAAGCTCCTTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFPGHL*EAPFSE
Trigger: TTCTGAAAAAGGAGCTTCTCAAAGATGACCTGGAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTTGTTCACGATCTATaGCAATCTTTACAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFVHDL*QSLQCL
Trigger: AAGGCACTGTAAAGATTGTCATAGATCGTGAACAAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTAGGACTCTTTATATaGAAACCCTCCATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILGLFI*KPSIFW
Trigger: CCAGAAAATGGAGGGTTTTCATATAAAGAGTCCTAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTCTGAAAGTCCCCTaGAAGGTCGTAAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLLKVP*KVVSSS
Trigger: GGAGGAACTTACGACCTTTCAGGGGACTTTCAGAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAGCTGCCACATTGGTTaGAGGTTTATATTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVSCHIG*RFIFFF
Trigger: GAAAAAGAATATAAACCTTCAACCAATGTGGCAGCT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGGAATATTGTTGCATaGAGTCTCCACTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGNIVA*SLHCAF
Trigger: AAAAGCACAGTGGAGACTTCATGCAACAATATTCCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGGGAATATTGTTGCATaGAGTCTCCACTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNGNIVA*SLHCAF
Trigger: AAAAGCACAGTGGAGACTTCATGCAACAATATTCCC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACTACATTCAGTGCTTaGTTCAGTTTTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTTFSA*FSFLGF
Trigger: AAAACCAAGAAAACTGAAGCAAGCACTGAATGTAGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTCGACAAAATCTGTTaGAGTTCTTCACGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLDKIC*SSSRFL
Trigger: GAGAAAACGTGAAGAACTGCAACAGATTTTGTCGAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCATGGCAATGTGAACTaGATATTCTCTCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIHGNVN*IFSLIF
Trigger: GAAGATAAGAGAGAATATGCAGTTCACATTGCCATG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACATGGCAATGTGAACTaGATATTCTCTCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVHGNVN*IFSLIF
Trigger: GAAGATAAGAGAGAATATGCAGTTCACATTGCCATG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGCGGATGATTTCAACTaGATCATAACTTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFADDFN*IITFSV
Trigger: GACACTGAAAGTTATGATGCAGTTGAAATCATCCGC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGTCACAGCCAGATTTaGCAGCTTCTGAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSHSQI*QLLSYV
Trigger: CACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCATCTATCTTTATGCTaGTTATGTCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSHLSLC*LCPKPS
Trigger: TGAAGGTTTTGGACATAAGCAGCATAAAGATAGATG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCTCAAATCATTCCTTTaGCCTTCACTGTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLKSFL*PSLLPA
Trigger: TGCTGGTAACAGTGAAGGGCAAAGGAATGATTTGAG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTCAAATCATTCCTTTaGCCTTCACTGTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLKSFL*PSLLPA
Trigger: TGCTGGTAACAGTGAAGGGCAAAGGAATGATTTGAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCACTCGGCCTATCTTaGACATTCTTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSLGLS*TFFLPS
Trigger: GGAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCACTCGGCCTATCTTaGACATTCTTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSLGLS*TFFLPS
Trigger: GGAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGGACTGCCAGCAGCTaGTCTGTCAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTRTASS*SVSLFL
Trigger: AAGAAACAGACTGACAGAGCAGCTGCTGGCAGTCCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATCAATATCTCTCAGTaGCTAAGTGTGGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSINISQ*LSVDCQ
Trigger: CTGACAGTCCACACTTAGGCACTGAGAGATATTGAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGCAGCACTGTCTTCTaGAAATCCACTCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSSTVF*KSTLRL
Trigger: AAGCCTGAGAGTGGATTTGCAGAAGACAGTGCTGCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGCAGCACTGTCTTCTaGAAATCCACTCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSSTVF*KSTLRL
Trigger: AAGCCTGAGAGTGGATTTGCAGAAGACAGTGCTGCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTGGCTGCTATGAATTaGCTCCTGCTCAGATCTGTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLAAMN*LLLRSV
Trigger: AACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGCTGCTTCTTGAAGTaGCAACCTGGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGCFLK*QPGCYE
Trigger: TTCATAGCAGCCAGGTTGGCACTTCAAGAAGCAGCC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGCAGCTTCTTAATCTaGTTGGCTGGGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSSFLI*LAGVVI
Trigger: GATGACAACCCCAGCCAAGCAGATTAAGAAGCTGCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGCAGCTTCTTAATCTaGTTGGCTGGGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSSFLI*LAGVVI
Trigger: GATGACAACCCCAGCCAAGCAGATTAAGAAGCTGCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTCTGCCTAGAGACCTaGCAGATTTCTCCAAATAAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVCLET*QISPNN
Trigger: ATTATTTGGAGAAATCTGGCAGGTCTCTAGGCAGAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAAAAGCGTTCAATCCTaGGCCGACTGCTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTKSVQS*ADCSGN
Trigger: ATTCCCTGAGCAGTCGGCGCAGGATTGAACGCTTTT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCATCCATCTAATGGACTaGACCTCTCCCTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGIHLMD*TSPFRI
Trigger: AATTCTGAAGGGAGAGGTGCAGTCCATTAGATGGAT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCAAACATCCACCGTaGTGTTCTTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFKHPP*CSYISL
Trigger: AAGGGAGATGTAAGAACAGCACGGTGGATGTTTGAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCAAACATCCACCGTaGTGTTCTTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFKHPP*CSYISL
Trigger: AAGGGAGATGTAAGAACAGCACGGTGGATGTTTGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCCGCTTTTTGTTGGTTaGCTTAAATGTATTGTGACT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIPLFVG*LKCIVT
Trigger: AGTCACAATACATTTAAGGCAACCAACAAAAAGCGG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTTGGGAATATTGTTaGATGAAGTCTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFWEYC*MKSPLC
Trigger: GCACAGTGGAGACTTCATGCAACAATATTCCCAAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGACACTGCTTCAAAGATaGGGCTGTGACCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRTLLQR*GCDHFQ
Trigger: CTGAAAGTGGTCACAGCCGCATCTTTGAAGCAGTGT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTGCCAGTTCAACTTTaGGGGAAAAATCGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILPVQL*GKNRSY
Trigger: ATAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATTACTTTGAGAGCCTaGGCTGGGTTGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKITLRA*AGLNHS
Trigger: ACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATTACTTTGAGAGCCTaGGCTGGGTTGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRITLRA*AGLNHS
Trigger: ACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGATGTTGTGGAGAGTTaGTTATCAGAACACACTCCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSDVVES*LSEHTP
Trigger: AGGAGTGTGTTCTGATAACCAACTCTCCACAACATC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTTCTGGCGATGTTGTaGAGAGTTGGTTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFLAML*RVGYQN
Trigger: GTTCTGATAACCAACTCTCCACAACATCGCCAGAAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTCTGGCGATGTTGTaGAGAGTTGGTTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFLAML*RVGYQN
Trigger: GTTCTGATAACCAACTCTCCACAACATCGCCAGAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGAAATTGGTTTGCTTTaGGGCAAGTGCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYREIGLL*GKCNCS
Trigger: GGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTTTCTTCACTTCCTaGAAGTTTCCCTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFFFTS*KFPSVR
Trigger: TCTGACAGAGGGAAACTTCCAGGAAGTGAAGAAAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAAGGCCACTTTTATTTaGCTCTGCTTCAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIKATFI*LCFKLF
Trigger: AAACAGTTTGAAGCAGAGCCAAATAAAAGTGGCCTT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACATGGGCCTTCTTGGTaGGGGTTCAACATAACTGTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHGPSW*GFNITV
Trigger: GACAGTTATGTTGAACCCCCACCAAGAAGGCCCATG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACGACATGGGCCTTCTTaGTGGGGGTTCAACATAACT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTRHGPS*WGFNIT
Trigger: AGTTATGTTGAACCCCCACCAAGAAGGCCCATGTCG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATGGGATGGCCCCTTTaGATAACTTTGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKMGWPL*ITLQWC
Trigger: ACACCACTGCAAAGTTATCCAAAGGGGCCATCCCAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCATGGGATGGCCCCTTTaGATAACTTTGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIMGWPL*ITLQWC
Trigger: ACACCACTGCAAAGTTATCCAAAGGGGCCATCCCAT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTATCCTCATAGGTTGGTaGGGCATGCTTGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIILIGW*GMLEVT
Trigger: TGTGACTTCAAGCATGCCCCACCAACCTATGAGGAT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCATCCTCATAGGTTGGTaGGGCATGCTTGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIILIGW*GMLEVT
Trigger: TGTGACTTCAAGCATGCCCCACCAACCTATGAGGAT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGNADSS*KVVLIS
Trigger: TGAGATGAGAACCACCTTCCAAGAGGAATCTGCATT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNNADSS*KVVLIS
Trigger: TGAGATGAGAACCACCTTCCAAGAGGAATCTGCATT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFNADSS*KVVLIS
Trigger: TGAGATGAGAACCACCTTCCAAGAGGAATCTGCATT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCATATTTCCTTGTCTTaGAGCAGCAGCTTCACTTAT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFHISLS*SSSFTY
Trigger: ATAAGTGAAGCTGCTGCTCCAAGACAAGGAAATATG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATTGTTTCTTCACCTTaGCCAAACCACCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKIVSSP*PNHQAL
Trigger: CAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATTGTTTCTTCACCTTaGCCAAACCACCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRIVSSP*PNHQAL
Trigger: CAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTAGTCGAAACCTTTaGAATCTCTTCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLSRNL*NLFILR
Trigger: CCTGAGGATGAAGAGATTCCAAAGGTTTCGACTAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGTAGGGCAGACTTGTaGGATCCAAAGATTGAGGTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKCRADL*DPKIEV
Trigger: CACCTCAATCTTTGGATCCCACAAGTCTGCCCTACA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGCTCATCAAGGGCAATaGAAAAGCGTTCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRAHQGQ*KSVQSC
Trigger: GCAGGATTGAACGCTTTTCCATTGCCCTTGATGAGC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTGACTCTTAAAAGCTaGCGAGCACAAACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVTLKS*RAQTSL
Trigger: GAGCGAAGTTTGTGCTCGCCAGCTTTTAAGAGTCAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTGACTCTTAAAAGCTaGCGAGCACAAACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVTLKS*RAQTSL
Trigger: GAGCGAAGTTTGTGCTCGCCAGCTTTTAAGAGTCAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTGAAACGCAAGAAGTaGAAGAGGTACTCACAACTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLKRKK*KRYSQL
Trigger: CAGTTGTGAGTACCTCTTCCACTTCTTGCGTTTCAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTGAAACGCAAGAAGTaGAAGAGGTACTCACAACTG +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLKRKK*KRYSQL
Trigger: CAGTTGTGAGTACCTCTTCCACTTCTTGCGTTTCAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGTTGATGGAATCCAATaGTTGATTCTCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIVDGIQ*LILKDP
Trigger: TGGATCTTTGAGAATCAACCATTGGATTCCATCAAC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAACATCCAACACTTTCTaGAGACATCTGTACCTATTA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVTSNTF*RHLYLL
Trigger: TAATAGGTACAGATGTCTCCAGAAAGTGTTGGATGT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGAATGTCTAATGGCTaGGTTTCAAACATCCAACAC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFRMSNG*VSNIQH
Trigger: GTGTTGGATGTTTGAAACCCAGCCATTAGACATTCT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTGAATGGCATACAGTaGTGTTGTCTCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLNGIQ*CCLEER
Trigger: TCTCTCTTCGAGACAACACCACTGTATGCCATTCAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACATCAAACTGGTCAATaGGCCTTGTTTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSHQTGQ*ALFQKA
Trigger: GGCTTTTTGAAACAAGGCCCATTGACCAGTTTGATG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCATTGAATCAAGAGGTTaGGTTTCAAACAACCATTTG +
Preference number: 4 (lower is better)
Translates to: SRVVISGGHLGLLILSSSIESRG*VSNNHL
Trigger: CAAATGGTTGTTTGAAACCCAACCTCTTGATTCAAT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGAGACTCCATTGGCTaGGTCTCAAAAAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRDSIG*VSKSHL
Trigger: TAAATGGCTTTTTGAGACCCAGCCAATGGAGTCTCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCGAACATCCCCACCTTaGATCTCCTCCTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIRTSPP*ISSCFT
Trigger: TGTAAAACAGGAGGAGATCCAAGGTGGGGATGTTCG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTGCCACCTTGTATATaGTCAATACTGGGCATAATA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLPPCI*SILGII
Trigger: TATTATGCCCAGTATTGACCATATACAAGGTGGCAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCAGTACAGTCCCTTTTaGAAAGTAGGTTCACCATTA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFQYSPF*KVGSPL
Trigger: TAATGGTGAACCTACTTTCCAAAAGGGACTGTACTG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGGCTCAAATGGACCTaGCTTTGGCTGAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKWLKWT*LWLKKT
Trigger: AGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCAAAAGCTGCCACATTaGTTGAAGGTTTATATTCTT +
Preference number: 4 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLQKLPH*LKVYIL
Trigger: AAGAATATAAACCTTCAACCAATGTGGCAGCTTTTG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTCATTTCTGTTACATTaGATGTGTCTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISFLLH*MCLALQ
Trigger: CTGTAGAGCAAGACACATCCAATGTAACAGAAATGA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAGGGTTAAAGTTGATTaGATTCAAGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVRVKVD*IQGPFH
Trigger: ATGGAAAGGTCCTTGAATCCAATCAACTTTAACCCT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGAAAGGAGATGTGCTaGCTTTTGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGKEMC*LLRWSW
Trigger: CCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGAAAGGAGATGTGCTaGCTTTTGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGKEMC*LLRWSW
Trigger: CCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATATCTTTTATATGCTTaGGAAGTTTGGGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVYLLYA*EVWVWA
Trigger: TGCCCAAACCCAAACTTCCCAAGCATATAAAAGATA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAATTTTGGATGCAGGTaGAGCCTGAGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNFGCR*SLRIWA
Trigger: AGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGTCTTTGTCAATTTTaGATGCAGGTGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGLCQF*MQVEPE
Trigger: CTCAGGCTCCACCTGCATCCAAAATTGACAAAGACC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTTACATTCCATATCTaGCAGGGAGGTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFTFHI*QGGCQF
Trigger: GAACTGGCAACCTCCCTGTCAGATATGGAATGTAAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTACATTCCATATCTaGCAGGGAGGTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFTFHI*QGGCQF
Trigger: GAACTGGCAACCTCCCTGTCAGATATGGAATGTAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTCTCTGGAAATGAATaGGATTTTATAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLSGNE*DFIRGA
Trigger: TGCGCCTCTTATAAAATCTCATTCATTTCCAGAGAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTCTCCATGGCAATGTaGACTGCATATTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFSMAM*TAYSLL
Trigger: TAAGAGAGAATATGCAGTTCACATTGCCATGGAGAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCTCCATGGCAATGTaGACTGCATATTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFSMAM*TAYSLL
Trigger: TAAGAGAGAATATGCAGTTCACATTGCCATGGAGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGTTTCTATCTTAATTTaGCGACGAAGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNVSILI*RRSVAG
Trigger: TCCTGCAACACTTCGTCGTCAAATTAAGATAGAAAC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCCTGATTTCCTCTTaGGCGTCCACAGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFLISS*ASTDSL
Trigger: CAGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCTTCTCCACTTTCCTaGTTTCCTCTTGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSSPLS*FPLERP
Trigger: TGGACGCTCAAGAGGAAATCAGGAAAGTGGAGAAGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTGCAACCTTGCGGATaGTTTCAACTGCATCATAAC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLQPCG*FQLHHN
Trigger: GTTATGATGCAGTTGAAATCATCCGCAAGGTTGCAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAAATTTTCAGCCATTTaGACAGTTCGGTTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKKFSAI*TVRLAA
Trigger: AGCGGCCAACCGAACTGTTCAAATGGCTGAAAATTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGGAATAAAGTCCACTaGTCTGCTTTGGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRNKVH*SALVFA
Trigger: TGCAAAAACCAAAGCAGATCAGTGGACTTTATTCCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGTTTGCACCTCAGGTaGTTCAATTTTATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGLHLR*FNFISE
Trigger: CTCTGAAATAAAATTGAATCACCTGAGGTGCAAACC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAGCAGTCGCTTTTATaGTATTTAGGTTTAACCCCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQQSLL*YLGLTP
Trigger: TGGGGTTAAACCTAAATATCATAAAAGCGACTGCTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGCAATTTGCTTTCCTaGGGCTGGAAAATTGTACAA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSNLLS*GWKIVQ
Trigger: TTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGCAATTTGCTTTCCTaGGGCTGGAAAATTGTACAA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSNLLS*GWKIVQ
Trigger: TTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAACTGATGATGGCTTaGAAGTCTCTTCATATTCAC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQLMMA*KSLHIH
Trigger: GTGAATATGAAGAGACTTTCAAGCCATCATCAGTTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAACTATATCTTGTAGTTaGTGTTTCCTTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSTISCS*CFLPLA
Trigger: AGCCAGAGGAAGGAAACATCAACTACAAGATATAGT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTGCTGTCACATCTACTaGAGTTTGAAGTACGTCAGG +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFICCHIY*SLKYVR
Trigger: CCTGACGTACTTCAAACTTCAGTAGATGTGACAGCA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTGCTGTCACATCTACTaGAGTTTGAAGTACGTCAGG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRCCHIY*SLKYVR
Trigger: CCTGACGTACTTCAAACTTCAGTAGATGTGACAGCA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCTCCCTGAGTTCATTTaGCTAGAAACAATCTCAGAA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLPEFI*LETISE
Trigger: TTCTGAGATTGTTTCTAGTCAAATGAACTCAGGGAG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACCAGCAATGATTTCTTaGTCAGCAATGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTPAMIS*SAMPLE
Trigger: TTCCAGGGGCATTGCTGATCAAGAAATCATTGCTGG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCATCACCACCAGCAATaGTTTCTTGATCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHHHQQ*FLDQQC
Trigger: GCATTGCTGATCAAGAAATCATTGCTGGTGGTGATG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTATGCATTTTATTCATTaGGTCCAATGGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFMHFIH*VQWPCF
Trigger: GAAACAAGGCCATTGGACTCAATGAATAAAATGCAT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATACTGATAGTTACCGCTaGTTCTTCTTGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNTDSYR*FFLTLM
Trigger: CATCAAAGTCAAGAAGAATCAGCGGTAACTATCAGT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATGAACCTCATCCACTaGATGAAGCTGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKMNLIH*MKLSKL
Trigger: CAACTTGGACAGCTTCATTCAGTGGATGAGGTTCAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCCTCTTCTGACTCTTTaGTTTTCTCCAAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIPLLTL*FSPKVG
Trigger: CCCAACCTTTGGAGAAAATCAAAGAGTCAGAAGAGG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCTCTTCTGACTCTTTaGTTTTCTCCAAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPLLTL*FSPKVG
Trigger: CCCAACCTTTGGAGAAAATCAAAGAGTCAGAAGAGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAATGATGACCTCTTCTaGCTCTTTGATTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFNDDLF*LFDFLQ
Trigger: TTGGAGAAAATCAAAGAGTCAGAAGAGGTCATCATT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCTGCACATCTTCCTaGGTGACTGTCTTGATATTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFCTSS*VTVLIF
Trigger: AAATATCAAGACAGTCACTCAGGAAGATGTGCAGAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCTGCACATCTTCCTaGGTGACTGTCTTGATATTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFCTSS*VTVLIF
Trigger: AAATATCAAGACAGTCACTCAGGAAGATGTGCAGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGCCATGTGGTTGTTTTaGCATCAGAAGGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKAMWLF*HQKEGF
Trigger: AAATCCCTCCTTCTGATGTCAAAACAACCACATGGC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTATGAATGGTACGTTTaGCATCACCACCTATTACTT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFYEWYV*HHHLLL
Trigger: AAGTAATAGGTGGTGATGTCAAACGTACCATTCATA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTCTATGCAGGTTGTaGAAAACTGAACATTTCCTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLLCRL*KTEHFL
Trigger: GAGGAAATGTTCAGTTTTTCACAACCTGCATAGAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTGTCAGTGTTTCATTTaGCTCTGTGTGGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFCQCFI*LCVELF
Trigger: AAACAACTCCACACAGAGTCAAATGAAACACTGACA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGTCAGTGTTTCATTTaGCTCTGTGTGGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSCQCFI*LCVELF
Trigger: AAACAACTCCACACAGAGTCAAATGAAACACTGACA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGATTTACAGCCTGGCTaGGGGAATTTAGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTDLQPG*GNLGLM
Trigger: CATCAACCCTAAATTCCCTCAGCCAGGCTGTAAATC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGACCTGGCTTTGGCTaGAGAAGACTATTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGPGFG*RRLFLF
Trigger: GAACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGGACCTGGCTTTGGCTaGAGAAGACTATTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIGPGFG*RRLFLF
Trigger: GAACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTGTTCACGATCTATaGCAATCTTTACAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFVHDL*QSLQCL
Trigger: AAGGCACTGTAAAGATTGTCATAGATCGTGAACAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAACAAAGTTTGCTTCTaGAAGTCCCCTGAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQINKVCF*KSPERS
Trigger: CGACCTTTCAGGGGACTTTCAGAAGCAAACTTTGTT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAACAAAGTTTGCTTCTaGAAGTCCCCTGAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNKVCF*KSPERS
Trigger: CGACCTTTCAGGGGACTTTCAGAAGCAAACTTTGTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAACAAAGTTTGCTTCTaGAAGTCCCCTGAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRNKVCF*KSPERS
Trigger: CGACCTTTCAGGGGACTTTCAGAAGCAAACTTTGTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTCTCTGTGGACAGTaGGGGAAGAAACCCATTTTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLLCGQ*GKKPIF
Trigger: AAAAATGGGTTTCTTCCCTCACTGTCCACAGAGAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTTCTCTGTGGACAGTaGGGGAAGAAACCCATTTTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLLCGQ*GKKPIF
Trigger: AAAAATGGGTTTCTTCCCTCACTGTCCACAGAGAAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTATAAGTTGAGGATTTaGGGCTGTTCTTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRYKLRI*GCSWGS
Trigger: AGACCCCCAAGAACAGCCTCAAATCCTCAACTTATA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCTCCGTGTGTTCACTaGTGGTCATCACCATTACTT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISPCVH*WSSPLL
Trigger: AAGTAATGGTGATGACCAGCAGTGAACACACGGAGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTCTCCGTGTGTTCACTaGTGGTCATCACCATTACTT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFISPCVH*WSSPLL
Trigger: AAGTAATGGTGATGACCAGCAGTGAACACACGGAGA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGGGGCAAGTGCAACTaGTCCAAATACTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKWGKCN*SKYFFC
Trigger: ACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTGCTTTGGGGCAAGTaGAACTGCTCCAAATACTTC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILLWGK*NCSKYF
Trigger: GAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCACTACATTCAGTGCTTaGTTCAGTTTTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPITTFSA*FSFLGF
Trigger: AAAACCAAGAAAACTGAAGCAAGCACTGAATGTAGT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGCATCGATAACCTTTTaGTTGACGACCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRASITF*LTTFGA
Trigger: AGCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGCATCGATAACCTTTTaGTTGACGACCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKASITF*LTTFGA
Trigger: AGCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGACATTTTTCTTCCTaGAGACTATTATATGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFRHFSS*RLLYGW
Trigger: CCAGCCATATAATAGTCTGCAGGAAGAAAAATGTCT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTCGACAAAATCTGTTaGAGTTCTTCACGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLDKIC*SSSRFL
Trigger: GAGAAAACGTGAAGAACTGCAACAGATTTTGTCGAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTGCTTCATGATGAGCTaGTACTTGGTGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQICFMMS*YLVLYC
Trigger: ACAGTACAGCACCAAGTAGCAGCTCATCATGAAGCA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGCTTCATGATGAGCTaGTACTTGGTGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKCFMMS*YLVLYC
Trigger: ACAGTACAGCACCAAGTAGCAGCTCATCATGAAGCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGTGACTACGAACAGTTaGTTCATGATGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIVTTNS*FMMSCY
Trigger: GTAGCAGCTCATCATGAAGCAACTGTTCGTAGTCAC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTGACTACGAACAGTTaGTTCATGATGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVTTNS*FMMSCY
Trigger: GTAGCAGCTCATCATGAAGCAACTGTTCGTAGTCAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGCGGATGATTTCAACTaGATCATAACTTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNADDFN*IITFSV
Trigger: GACACTGAAAGTTATGATGCAGTTGAAATCATCCGC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCAGAAACTGGGCCATaGTCAAATTCCCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSETGP*SNSLNH
Trigger: ATGGTTCAGGGAATTTGAGCATGGCCCAGTTTCTGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGAGCAGATCCTGGGCTaGTTAACAGGAATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIEQILG*LTGIFS
Trigger: AGAAAAGATTCCTGTTAAGCAGCCCAGGATCTGCTC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAGAAGCATCTGCGGTTaGATATCCCAGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIRSICG*ISQAFK
Trigger: TTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCACTCGGCCTATCTTaGACATTCTTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSLGLS*TFFLPS
Trigger: GGAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTGTGTTTTCATTATTaGGGGCAGCTTCTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLCFHY*GQLLLF
Trigger: AAACAACAGAAGCTGCCCGCAATAATGAAAACACAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCTGTGTTTTCATTATTaGGGGCAGCTTCTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNLCFHY*GQLLLF
Trigger: AAACAACAGAAGCTGCCCGCAATAATGAAAACACAG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGCAGCACTGTCTTCTaGAAATCCACTCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSSTVF*KSTLRL
Trigger: AAGCCTGAGAGTGGATTTGCAGAAGACAGTGCTGCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTGGCTGCTATGAATTaGCTCCTGCTCAGATCTGTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLAAMN*LLLRSV
Trigger: AACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCTTGTTCATTTCTTaGCATTTCCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFLFIS*HFLAAS
Trigger: AGAAGCAGCCAGGAAATGGCAAGAAATGAACAAGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTCTTGTTCATTTCTTaGCATTTCCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFLFIS*HFLAAS
Trigger: AGAAGCAGCCAGGAAATGGCAAGAAATGAACAAGAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCTTGTTCATTTCTTaGCATTTCCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFLFIS*HFLAAS
Trigger: AGAAGCAGCCAGGAAATGGCAAGAAATGAACAAGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTGATGAAACTGAGATaGTTGGTTTACTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLMKLR*LVYFLG
Trigger: ACCGAGGAAGTAAACCAAGCATCTCAGTTTCATCAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGCAGCTTCTTAATCTaGTTGGCTGGGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSSFLI*LAGVVI
Trigger: GATGACAACCCCAGCCAAGCAGATTAAGAAGCTGCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATGTTCCCTTTTGTCTaGCTAGAGACCTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKMFPFV*LETCQI
Trigger: AATCTGGCAGGTCTCTAGGCAGACAAAAGGGAACAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAGGCGCAAGCAATTTaGTTTCCTGAGGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQAQAI*FPEAGK
Trigger: TTTTCCAGCCTCAGGAAAGCAAATTGCTTGCGCCTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTTTCAGTCTTAATCTaGTTGGCTGGGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLSVLI*LAGVVI
Trigger: GATGACAACCCCAGCCAAGCAGATTAAGACTGAAAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACATACCGGGCTTGTTaGACATCTGCTGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTYRAC*TSAETE
Trigger: TTCAGTCTCAGCAGATGTGCAACAAGCCCGGTATGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTTCTTGATCAGCAATaGCCCTGGAAATATCACCTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFLDQQ*PWKYHL
Trigger: AAGGTGATATTTCCAGGGGCATTGCTGATCAAGAAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTCTTGATCAGCAATaGCCCTGGAAATATCACCTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFLDQQ*PWKYHL
Trigger: AAGGTGATATTTCCAGGGGCATTGCTGATCAAGAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTCTCGGTCTTGAATTaGATAGAGTGGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFSVLN*IEWLGF
Trigger: GAAACCCAGCCACTCTATGCAATTCAAGACCGAGAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTCTCGGTCTTGAATTaGATAGAGTGGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFSVLN*IEWLGF
Trigger: GAAACCCAGCCACTCTATGCAATTCAAGACCGAGAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAAAAGCCACACAGCCTaGTTAACATCACCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKKSHTA*LTSPFC
Trigger: GCAGAAAGGTGATGTTAAGCAGGCTGTGTGGCTTTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGTTCATATGTCTGTTaGTTTCCAACGGTTTTACCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSSYVC*FPTVLP
Trigger: TGGTAAAACCGTTGGAAAGCAACAGACATATGAACT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTTTTCTTCACTTCCTaGAAGTTTCCCTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFFFTS*KFPSVR
Trigger: TCTGACAGAGGGAAACTTCCAGGAAGTGAAGAAAAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTTTTCTTCACTTCCTaGAAGTTTCCCTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFFFTS*KFPSVR
Trigger: TCTGACAGAGGGAAACTTCCAGGAAGTGAAGAAAAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAAGGCCACTTTTATTTaGCTCTGCTTCAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFKATFI*LCFKLF
Trigger: AAACAGTTTGAAGCAGAGCCAAATAAAAGTGGCCTT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACCGGTTTTCCTGTTTTaGAGGACATCATGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTPVFLF*RTSWLS
Trigger: AGACAGCCATGATGTCCTCCAAAACAGGAAAACCGG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATATTGTGATTGTAGGTaGAGAGTCCCTACCACGAGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKYCDCR*RVPTTS
Trigger: ACTCGTGGTAGGGACTCTCCACCTACAATCACAATA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTATTGTGATTGTAGGTaGAGAGTCCCTACCACGAGT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIYCDCR*RVPTTS
Trigger: ACTCGTGGTAGGGACTCTCCACCTACAATCACAATA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTTGAACAGTTCGGTTaGCCGCTTCATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFEQFG*PLHISV
Trigger: CACAGAGATATGAAGCGGCCAACCGAACTGTTCAAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTGAACAGTTCGGTTaGCCGCTTCATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFEQFG*PLHISV
Trigger: CACAGAGATATGAAGCGGCCAACCGAACTGTTCAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTTGCTTCAGAAACTaGGCCATGCTCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLCFRN*AMLKFP
Trigger: AGGGAATTTGAGCATGGCCCAGTTTCTGAAGCAAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCATTCCTCTTGGAAGGTaGTTCTCATCTCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIIPLGR*FSSQLQ
Trigger: CTGCAACTGAGATGAGAACCACCTTCCAAGAGGAAT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTACTGTTGCAATGGTaGCATCGGAAGCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLLLQW*HRKQDL
Trigger: TAAGTCCTGCTTCCGATGCCACCATTGCAACAGTAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTACTGTTGCAATGGTaGCATCGGAAGCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFILLLQW*HRKQDL
Trigger: TAAGTCCTGCTTCCGATGCCACCATTGCAACAGTAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTACTGTTGCAATGGTaGCATCGGAAGCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLLLQW*HRKQDL
Trigger: TAAGTCCTGCTTCCGATGCCACCATTGCAACAGTAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCTGACAAACATGGGTaGACTGTAGATAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSDKHG*TVDKAA
Trigger: TGCAGCCTTATCTACAGTCCACCCATGTTTGTCAGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTAGCTGTACATTCATaGCTCAGAGCATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLAVHS*LRASKP
Trigger: AGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTCTTGCCATTTCCTaGCTGCTTCTTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFLAIS*LLLEVP
Trigger: TGGCACTTCAAGAAGCAGCCAGGAAATGGCAAGAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTCTTGCCATTTCCTaGCTGCTTCTTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFLAIS*LLLEVP
Trigger: TGGCACTTCAAGAAGCAGCCAGGAAATGGCAAGAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACATATTTCCTTGTCTTaGAGCAGCAGCTTCTTAATC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSHISLS*SSSFLI
Trigger: GATTAAGAAGCTGCTGCTCCAAGACAAGGAAATATG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCATTGGGAACATGGATaGGTCCAGGTTGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHWEHG*VQVVLF
Trigger: AAAAAGGACAACCTGGACCCATCCATGTTCCCAATG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATGTAGGGCAGACTTGTaGGATCCAAAGATTGAGGTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTCRADL*DPKIEV
Trigger: CACCTCAATCTTTGGATCCCACAAGTCTGCCCTACA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGCCGACCATATTCCCTaGTGTTGTTACTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTADHIP*CCYSCP
Trigger: TGGACAAGAGTAACAACACCAGGGAATATGGTCGGC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGATGTTTCCTTCCTCTaGCTGGTTGAAACGCAAGAA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRDVSFL*LVETQE
Trigger: TTCTTGCGTTTCAACCAGCCAGAGGAAGGAAACATC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGATCAGCAATGCCCCTaGAAATATCACCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKDQQCP*KYHLHQ
Trigger: CTGATGAAGGTGATATTTCCAGGGGCATTGCTGATC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGATCAGCAATGCCCCTaGAAATATCACCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRDQQCP*KYHLHQ
Trigger: CTGATGAAGGTGATATTTCCAGGGGCATTGCTGATC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGTGTGTCGATGGGTTaGGTTTCAAACATCCATGTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSVSMG*VSNIHV
Trigger: CACATGGATGTTTGAAACCCAACCCATCGACACACT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGCAGACATCTCCTCTaGCTAGCTCAGGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKCRHLL*LAQEFS
Trigger: AGAAAATTCCTGAGCTAGCCAGAGGAGATGTCTGCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGAATGTCTAATGGCTaGGTTTCAAACATCCAACAC +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNRMSNG*VSNIQH
Trigger: GTGTTGGATGTTTGAAACCCAGCCATTAGACATTCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAAGGGGATCTTGAATaGCATACAGTGGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQGDLE*HTVVLS
Trigger: AGACAACACCACTGTATGCCATTCAAGATCCCCTTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTTATGGTATCAAGTaGCTGAGTTTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFYGIK*LSFKEP
Trigger: TGGCTCTTTGAAACTCAGCCACTTGATACCATAAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTGAATTGCATAGAGTaGCTGGGTTTCAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLNCIE*LGFKEH
Trigger: ATGCTCTTTGAAACCCAGCCACTCTATGCAATTCAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAGTACAGTCCCTTTTaGAAAGTAGGTTCACCATTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQYSPF*KVGSPL
Trigger: TAATGGTGAACCTACTTTCCAAAAGGGACTGTACTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGCCTTTGGGGGCTTTTaGAAGATTAACCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRAFGGF*KINLSS
Trigger: AGAACTGAGGTTAATCTTCCAAAAGCCCCCAAAGGC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCTTTATCTTCTCTGTaGACAGTGAGGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPLSSL*TVREET
Trigger: GGTTTCTTCCCTCACTGTCCACAGAGAAGATAAAGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGGAAGAGGGAGGCCTaGAAAACTTTCAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRKREA*KTFKFS
Trigger: GCTGAATTTGAAAGTTTTCCAGGCCTCCCTCTTCCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGACGACCTTTGGTGCTaGTTTATTCTTCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKDDLWC*FILQMF
Trigger: GAACATCTGAAGAATAAATCAGCACCAAAGGTCGTC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAAAATTCTGAGTCTGTaGATCAAGATGTGCATCGAT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFKILSL*IKMCID
Trigger: ATCGATGCACATCTTGATTCACAGACTCAGAATTTT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAAAATTCTGAGTCTGTaGATCAAGATGTGCATCGAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSKILSL*IKMCID
Trigger: ATCGATGCACATCTTGATTCACAGACTCAGAATTTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCCTTTTTAGGGGACTaGGAAAGCTCGTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSFLGD*ESSFLV
Trigger: TACTAAGAACGAGCTTTCTCAGTCCCCTAAAAAGGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTGCAACCTTGCGGATaGTTTCAACTGCATCATAAC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLQPCG*FQLHHN
Trigger: GTTATGATGCAGTTGAAATCATCCGCAAGGTTGCAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACATGCTCAAATTCCCTaGACCATCTGTTTATTTCAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSHAQIP*TICLFH
Trigger: ATGAAATAAACAGATGGTTCAGGGAATTTGAGCATG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCATGCTCAAATTCCCTaGACCATCTGTTTATTTCAT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFHAQIP*TICLFH
Trigger: ATGAAATAAACAGATGGTTCAGGGAATTTGAGCATG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCATGCTCAAATTCCCTaGACCATCTGTTTATTTCAT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNHAQIP*TICLFH
Trigger: ATGAAATAAACAGATGGTTCAGGGAATTTGAGCATG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATAACATCCTCTTTCTaGCAAACATGGGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRITSSF*QTWVDC
Trigger: ACAGTCCACCCATGTTTGTCAGAAAGAGGATGTTAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCAAGAAATATCCCATTaGGATAGACACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNQEISH*DRHEIS
Trigger: AGAAATCTCGTGTCTATCTCAATGGGATATTTCTTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAAGAAATATCCCATTaGGATAGACACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQEISH*DRHEIS
Trigger: AGAAATCTCGTGTCTATCTCAATGGGATATTTCTTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGTAGATGGGACGGCTaGATTTATTTTAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSRWDG*IYFSRA
Trigger: CGCTCTGCTAAAATAAATTCAGCCGTCCCATCTACT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409273.6
ENST00000409605.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACACTGCGCACATTTCTaGTTCTTCCATCATATTAGC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHCAHF*FFHHIS
Trigger: GCTAATATGATGGAAGAATCAGAAATGTGCGCAGTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCACTGCGCACATTTCTaGTTCTTCCATCATATTAGC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIHCAHF*FFHHIS
Trigger: GCTAATATGATGGAAGAATCAGAAATGTGCGCAGTG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCACTGCGCACATTTCTaGTTCTTCCATCATATTAGC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHCAHF*FFHHIS
Trigger: GCTAATATGATGGAAGAATCAGAAATGTGCGCAGTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTGTGCTTTTCAAGATaGGAGACCATTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVCFSR*ETISVP
Trigger: TGGAACAGAAATGGTCTCTCATCTTGAAAAGCACAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCTCAGGTGTATCAATaGCAGTTTCTTGAACATATT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPQVYQ*QFLEHI
Trigger: AATATGTTCAAGAAACTGTCATTGATACACCTGAGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCCTCAGGTGTATCAATaGCAGTTTCTTGAACATATT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFPQVYQ*QFLEHI
Trigger: AATATGTTCAAGAAACTGTCATTGATACACCTGAGG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCCTCAGGTGTATCAATaGCAGTTTCTTGAACATATT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGPQVYQ*QFLEHI
Trigger: AATATGTTCAAGAAACTGTCATTGATACACCTGAGG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTGACCACTTTCAGGTaGCATCTTGTCAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVTTFR*HLVKRC
Trigger: ACATCTTTTGACAAGATGTCACCTGAAAGTGGTCAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACCAGAGTTGAGGAAGTaGCACTGTGATCACTATATC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTPELRK*HCDHYI
Trigger: GATATAGTGATCACAGTGTCACTTCCTCAACTCTGG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATATGGAATCCAATGGTTaGTTCTCAAAGATCCATCTA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNMESNG*FSKIHL
Trigger: TAGATGGATCTTTGAGAATCAACCATTGGATTCCAT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATGGAATCCAATGGTTaGTTCTCAAAGATCCATCTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSMESNG*FSKIHL
Trigger: TAGATGGATCTTTGAGAATCAACCATTGGATTCCAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAGGAGAGCCATTGTTaGTGGAATCCAATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQESHC*WNPMVD
Trigger: ATCAACCATTGGATTCCATCAACAATGGCTCTCCTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATGCATTTTATTCATTaGGTCCAATGGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSMHFIH*VQWPCF
Trigger: GAAACAAGGCCATTGGACTCAATGAATAAAATGCAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTACTCACCCCACCTTTaGCATTTTCTTCCATGGATA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIYSPHL*HFLPWI
Trigger: TATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAATGATGACCTCTTCTaGCTCTTTGATTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFNDDLF*LFDFLQ
Trigger: TTGGAGAAAATCAAAGAGTCAGAAGAGGTCATCATT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTGACATCTCCCTTATaGATTTCTTCACTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFILTSPL*ISSLLV
Trigger: GACCAGCAGTGAAGAAATTCATAAGGGAGATGTCAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTGACATCTCCCTTATaGATTTCTTCACTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLTSPL*ISSLLV
Trigger: GACCAGCAGTGAAGAAATTCATAAGGGAGATGTCAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGCCAAGTACAAGTTTTaGCATCTCCCTTATGAATTT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGAKYKF*HLPYEF
Trigger: AAATTCATAAGGGAGATGTCAAAACTTGTACTTGGC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATGGTATCAAGTGGCTaGGTTTCAAAGAGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRMVSSG*VSKSQV
Trigger: TACTTGGCTCTTTGAAACTCAGCCACTTGATACCAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCATGGTATCAAGTGGCTaGGTTTCAAAGAGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIMVSSG*VSKSQV
Trigger: TACTTGGCTCTTTGAAACTCAGCCACTTGATACCAT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTATGAATGGTACGTTTaGCATCACCACCTATTACTT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGYEWYV*HHHLLL
Trigger: AAGTAATAGGTGGTGATGTCAAACGTACCATTCATA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAGGTTGTGAAAAACTaGACATTTCCTCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQVVKN*TFPLSE
Trigger: CTCTGAGAGAGGAAATGTTCAGTTTTTCACAACCTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGACCTGGCTTTGGCTaGAGAAGACTATTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGPGFG*RRLFLF
Trigger: GAACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTTGTTCACGATCTATaGCAATCTTTACAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFVHDL*QSLQCL
Trigger: AAGGCACTGTAAAGATTGTCATAGATCGTGAACAAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTGGGTTGAACCACAGTaGATTCTGAATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIWVEPQ*ILNQFQ
Trigger: CTGGAATTGATTCAGAATGCACTGTGGTTCAACCCA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATGGGGCAAGTGCAACTaGTCCAAATACTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTWGKCN*SKYFFC
Trigger: ACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAGACATTTTTCTTCCTaGAGACTATTATATGGCTGG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGRHFSS*RLLYGW
Trigger: CCAGCCATATAATAGTCTGCAGGAAGAAAAATGTCT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGACATTTTTCTTCCTaGAGACTATTATATGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNRHFSS*RLLYGW
Trigger: CCAGCCATATAATAGTCTGCAGGAAGAAAAATGTCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGAAGGGGAAGTGTTTaGTCTGTGAATTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRRGSV*SVNFRF
Trigger: AAATCTGAAATTCACAGAGCAAACACTTCCCCTTCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAGAAACTGGGCCATaGTCAAATTCCCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSETGP*SNSLNH
Trigger: ATGGTTCAGGGAATTTGAGCATGGCCCAGTTTCTGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGCTTCACTTATAAATaGAGATTCCTCTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSFTYK*RFLLEG
Trigger: ACCTTCCAAGAGGAATCTGCATTTATAAGTGAAGCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCATCTATCTTTATGCTaGTTATGTCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFHLSLC*LCPKPS
Trigger: TGAAGGTTTTGGACATAAGCAGCATAAAGATAGATG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTCAAATCATTCCTTTaGCCTTCACTGTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLKSFL*PSLLPA
Trigger: TGCTGGTAACAGTGAAGGGCAAAGGAATGATTTGAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATCAATATCTCTCAGTaGCTAAGTGTGGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKINISQ*LSVDCQ
Trigger: CTGACAGTCCACACTTAGGCACTGAGAGATATTGAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATCAATATCTCTCAGTaGCTAAGTGTGGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRINISQ*LSVDCQ
Trigger: CTGACAGTCCACACTTAGGCACTGAGAGATATTGAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATGTTCCCTTTTGTCTaGCTAGAGACCTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTMFPFV*LETCQI
Trigger: AATCTGGCAGGTCTCTAGGCAGACAAAAGGGAACAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCATCCATCTAATGGACTaGACCTCTCCCTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIIHLMD*TSPFRI
Trigger: AATTCTGAAGGGAGAGGTGCAGTCCATTAGATGGAT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTCAAACATCCACCGTaGTGTTCTTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFKHPP*CSYISL
Trigger: AAGGGAGATGTAAGAACAGCACGGTGGATGTTTGAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGACCTTAACTGTGTTATaGACATCTCCAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRTLTVL*TSPGMM
Trigger: CATCATCCCTGGAGATGTGCATAACACAGTTAAGGT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCGCTTTTTGTTGGTTaGCTTAAATGTATTGTGACT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPLFVG*LKCIVT
Trigger: AGTCACAATACATTTAAGGCAACCAACAAAAAGCGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTGTCAATTTTGGATaGAGGTGGAGCCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFVNFG*RWSLRI
Trigger: GATTCTCAGGCTCCACCTGCATCCAAAATTGACAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTGCCAGTTCAACTTTaGGGGAAAAATCGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLPVQL*GKNRSY
Trigger: ATAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGATGTTGTGGAGAGTTaGTTATCAGAACACACTCCT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIDVVES*LSEHTP
Trigger: AGGAGTGTGTTCTGATAACCAACTCTCCACAACATC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGATGTTGTGGAGAGTTaGTTATCAGAACACACTCCT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIDVVES*LSEHTP
Trigger: AGGAGTGTGTTCTGATAACCAACTCTCCACAACATC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTCTGGCGATGTTGTaGAGAGTTGGTTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFLAML*RVGYQN
Trigger: GTTCTGATAACCAACTCTCCACAACATCGCCAGAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGAAATTTGGGGAAATTaGTTTGCTTTGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIEIWGN*FALGQV
Trigger: CACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGAAATTTGGGGAAATTaGTTTGCTTTGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIEIWGN*FALGQV
Trigger: CACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGAAATTTGGGGAAATTaGTTTGCTTTGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKEIWGN*FALGQV
Trigger: CACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAAGGCCACTTTTATTTaGCTCTGCTTCAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNKATFI*LCFKLF
Trigger: AAACAGTTTGAAGCAGAGCCAAATAAAAGTGGCCTT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATATTGTGATTGTAGGTaGAGAGTCCCTACCACGAGT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTYCDCR*RVPTTS
Trigger: ACTCGTGGTAGGGACTCTCCACCTACAATCACAATA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTGAACAGTTCGGTTaGCCGCTTCATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFEQFG*PLHISV
Trigger: CACAGAGATATGAAGCGGCCAACCGAACTGTTCAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTTGCTTCAGAAACTaGGCCATGCTCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLCFRN*AMLKFP
Trigger: AGGGAATTTGAGCATGGCCCAGTTTCTGAAGCAAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNADSS*KVVLIS
Trigger: TGAGATGAGAACCACCTTCCAAGAGGAATCTGCATT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTAAAGGATGCAACTTaGCACCTATTTTTAGGAACT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLKDAT*HLFLGT
Trigger: AGTTCCTAAAAATAGGTGCCAAGTTGCATCCTTTAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTTAGTCGAAACCTTTaGAATCTCTTCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLSRNL*NLFILR
Trigger: CCTGAGGATGAAGAGATTCCAAAGGTTTCGACTAAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTAGTCGAAACCTTTaGAATCTCTTCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLSRNL*NLFILR
Trigger: CCTGAGGATGAAGAGATTCCAAAGGTTTCGACTAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACATTGGGAACATGGATaGGTCCAGGTTGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHWEHG*VQVVLF
Trigger: AAAAAGGACAACCTGGACCCATCCATGTTCCCAATG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTGAAACGCAAGAAGTaGAAGAGGTACTCACAACTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLKRKK*KRYSQL
Trigger: CAGTTGTGAGTACCTCTTCCACTTCTTGCGTTTCAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGATGTTTCCTTCCTCTaGCTGGTTGAAACGCAAGAA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTDVSFL*LVETQE
Trigger: TTCTTGCGTTTCAACCAGCCAGAGGAAGGAAACATC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGTTGATGGAATCCAATaGTTGATTCTCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNVDGIQ*LILKDP
Trigger: TGGATCTTTGAGAATCAACCATTGGATTCCATCAAC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGATCAGCAATGCCCCTaGAAATATCACCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTDQQCP*KYHLHQ
Trigger: CTGATGAAGGTGATATTTCCAGGGGCATTGCTGATC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGTGTGTCGATGGGTTaGGTTTCAAACATCCATGTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSVSMG*VSNIHV
Trigger: CACATGGATGTTTGAAACCCAACCCATCGACACACT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCACATCCAACACTTTCTaGAGACATCTGTACCTATTA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFTSNTF*RHLYLL
Trigger: TAATAGGTACAGATGTCTCCAGAAAGTGTTGGATGT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAACATCCAACACTTTCTaGAGACATCTGTACCTATTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSTSNTF*RHLYLL
Trigger: TAATAGGTACAGATGTCTCCAGAAAGTGTTGGATGT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTGAATGGCATACAGTaGTGTTGTCTCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLNGIQ*CCLEER
Trigger: TCTCTCTTCGAGACAACACCACTGTATGCCATTCAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAAGGGGATCTTGAATaGCATACAGTGGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQGDLE*HTVVLS
Trigger: AGACAACACCACTGTATGCCATTCAAGATCCCCTTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCATCAAACTGGTCAATaGGCCTTGTTTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIHQTGQ*ALFQKA
Trigger: GGCTTTTTGAAACAAGGCCCATTGACCAGTTTGATG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCATCAAACTGGTCAATaGGCCTTGTTTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIHQTGQ*ALFQKA
Trigger: GGCTTTTTGAAACAAGGCCCATTGACCAGTTTGATG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATCAAACTGGTCAATaGGCCTTGTTTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHQTGQ*ALFQKA
Trigger: GGCTTTTTGAAACAAGGCCCATTGACCAGTTTGATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGAGACTCCATTGGCTaGGTCTCAAAAAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRDSIG*VSKSHL
Trigger: TAAATGGCTTTTTGAGACCCAGCCAATGGAGTCTCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCATAAAGAGACTCCATTaGCTGGGTCTCAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIIKRLH*LGLKKP
Trigger: TGGCTTTTTGAGACCCAGCCAATGGAGTCTCTTTAT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTTTATGGTATCAAGTaGCTGAGTTTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFYGIK*LSFKEP
Trigger: TGGCTCTTTGAAACTCAGCCACTTGATACCATAAAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAGAAATCTGATCCAGTaGCTGAGTTTCAAATCTGTA +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFRNLIQ*LSFKSV
Trigger: TACAGATTTGAAACTCAGCCACTGGATCAGATTTCT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGAAATCTGATCCAGTaGCTGAGTTTCAAATCTGTA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRNLIQ*LSFKSV
Trigger: TACAGATTTGAAACTCAGCCACTGGATCAGATTTCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGATTCTTTCCATCGATaGCTTGATTCTTTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSDSFHR*LDSLSD
Trigger: GTCACTTAAAGAATCAAGCCATCGATGGAAAGAATC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAAATGGACCTGGCTTTaGCTGAAGAAGACTATTTTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSKWTWL*LKKTIF
Trigger: AAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTCTACTAAATTGCCATaGCAAGATTTCCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSTKLP*QDFPIV
Trigger: AACTATGGGGAAATCTTGCCATGGCAATTTAGTAGA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGTTTTACCAGCAGATTaGATGGAATTAAAGACATCA +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFVLPAD*MELKTS
Trigger: TGATGTCTTTAATTCCATCCAATCTGCTGGTAAAAC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCAAAAGCTGCCACATTaGTTGAAGGTTTATATTCTT +
Preference number: 4 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFQKLPH*LKVYIL
Trigger: AAGAATATAAACCTTCAACCAATGTGGCAGCTTTTG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTCATTTCTGTTACATTaGATGTGTCTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGSFLLH*MCLALQ
Trigger: CTGTAGAGCAAGACACATCCAATGTAACAGAAATGA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGGGTTAAAGTTGATTaGATTCAAGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRVKVD*IQGPFH
Trigger: ATGGAAAGGTCCTTGAATCCAATCAACTTTAACCCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTCTCTGGAAATGAATaGGATTTTATAAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLSGNE*DFIRGA
Trigger: TGCGCCTCTTATAAAATCTCATTCATTTCCAGAGAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGACGACCTTTGGTGCTaGTTTATTCTTCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTDDLWC*FILQMF
Trigger: GAACATCTGAAGAATAAATCAGCACCAAAGGTCGTC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTCTCCATGGCAATGTaGACTGCATATTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFSMAM*TAYSLL
Trigger: TAAGAGAGAATATGCAGTTCACATTGCCATGGAGAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCCTTTTTAGGGGACTaGGAAAGCTCGTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSFLGD*ESSFLV
Trigger: TACTAAGAACGAGCTTTCTCAGTCCCCTAAAAAGGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTTTCTATCTTAATTTaGCGACGAAGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVSILI*RRSVAG
Trigger: TCCTGCAACACTTCGTCGTCAAATTAAGATAGAAAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGTTTCTATCTTAATTTaGCGACGAAGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIVSILI*RRSVAG
Trigger: TCCTGCAACACTTCGTCGTCAAATTAAGATAGAAAC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGGAATAAAGTCCACTaGTCTGCTTTGGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRNKVH*SALVFA
Trigger: TGCAAAAACCAAAGCAGATCAGTGGACTTTATTCCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATAACATCCTCTTTCTaGCAAACATGGGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTITSSF*QTWVDC
Trigger: ACAGTCCACCCATGTTTGTCAGAAAGAGGATGTTAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGTTTGCACCTCAGGTaGTTCAATTTTATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGLHLR*FNFISE
Trigger: CTCTGAAATAAAATTGAATCACCTGAGGTGCAAACC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACACTGCGCACATTTCTaGTTCTTCCATCATATTAGC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHCAHF*FFHHIS
Trigger: GCTAATATGATGGAAGAATCAGAAATGTGCGCAGTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTGTGCTTTTCAAGATaGGAGACCATTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVCFSR*ETISVP
Trigger: TGGAACAGAAATGGTCTCTCATCTTGAAAAGCACAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGCAATTTGCTTTCCTaGGGCTGGAAAATTGTACAA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSNLLS*GWKIVQ
Trigger: TTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAACTGATGATGGCTTaGAAGTCTCTTCATATTCAC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQLMMA*KSLHIH
Trigger: GTGAATATGAAGAGACTTTCAAGCCATCATCAGTTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGACTATATCTTGTAGTTaGTGTTTCCTTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRTISCS*CFLPLA
Trigger: AGCCAGAGGAAGGAAACATCAACTACAAGATATAGT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAACTATATCTTGTAGTTaGTGTTTCCTTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKTISCS*CFLPLA
Trigger: AGCCAGAGGAAGGAAACATCAACTACAAGATATAGT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGAGGAAGTGACACTGTaGTCACTATATCTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIEEVTL*SLYLVV
Trigger: AACTACAAGATATAGTGATCACAGTGTCACTTCCTC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCTCCCTGAGTTCATTTaGCTAGAAACAATCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILPEFI*LETISE
Trigger: TTCTGAGATTGTTTCTAGTCAAATGAACTCAGGGAG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTCCCTGAGTTCATTTaGCTAGAAACAATCTCAGAA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLPEFI*LETISE
Trigger: TTCTGAGATTGTTTCTAGTCAAATGAACTCAGGGAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTGACATCTCCCTTATaGATTTCTTCACTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLTSPL*ISSLLV
Trigger: GACCAGCAGTGAAGAAATTCATAAGGGAGATGTCAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTCTGCACATCTTCCTaGGTGACTGTCTTGATATTT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFCTSS*VTVLIF
Trigger: AAATATCAAGACAGTCACTCAGGAAGATGTGCAGAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAGGTTGTGAAAAACTaGACATTTCCTCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQVVKN*TFPLSE
Trigger: CTCTGAGAGAGGAAATGTTCAGTTTTTCACAACCTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCTTCTATGCAGGTTGTaGAAAACTGAACATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFILLCRL*KTEHFL
Trigger: GAGGAAATGTTCAGTTTTTCACAACCTGCATAGAAG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTCTATGCAGGTTGTaGAAAACTGAACATTTCCTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLLCRL*KTEHFL
Trigger: GAGGAAATGTTCAGTTTTTCACAACCTGCATAGAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGTCAGTGTTTCATTTaGCTCTGTGTGGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKCQCFI*LCVELF
Trigger: AAACAACTCCACACAGAGTCAAATGAAACACTGACA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGGAATATTGTTGCATaGAGTCTCCACTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGNIVA*SLHCAF
Trigger: AAAAGCACAGTGGAGACTTCATGCAACAATATTCCC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATGGGTTGAACCACAGTaGATTCTGAATCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTWVEPQ*ILNQFQ
Trigger: CTGGAATTGATTCAGAATGCACTGTGGTTCAACCCA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCACTACATTCAGTGCTTaGTTCAGTTTTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFTTFSA*FSFLGF
Trigger: AAAACCAAGAAAACTGAAGCAAGCACTGAATGTAGT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAACTACATTCAGTGCTTaGTTCAGTTTTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSTTFSA*FSFLGF
Trigger: AAAACCAAGAAAACTGAAGCAAGCACTGAATGTAGT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTCGACAAAATCTGTTaGAGTTCTTCACGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLDKIC*SSSRFL
Trigger: GAGAAAACGTGAAGAACTGCAACAGATTTTGTCGAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAACTTAGTTTACTGTTaGAATGGTGGCATCGGAAGC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTNLVYC*NGGIGS
Trigger: GCTTCCGATGCCACCATTGCAACAGTAAACTAAGTT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCATCTATCTTTATGCTaGTTATGTCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNHLSLC*LCPKPS
Trigger: TGAAGGTTTTGGACATAAGCAGCATAAAGATAGATG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSVVST*QGLTSF
Trigger: AAAGGATGTTAAACCTTGGCATGTTGAAACAACAGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTGTGTTTTCATTATTaGGGGCAGCTTCTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLCFHY*GQLLLF
Trigger: AAACAACAGAAGCTGCCCGCAATAATGAAAACACAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTGTTTCTTTTAATCTaGTCTTCCACCGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLFLLI*SSTVSC
Trigger: ACAACTCACGGTGGAAGAGCAGATTAAAAGAAACAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATCAATATCTCTCAGTaGCTAAGTGTGGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTINISQ*LSVDCQ
Trigger: CTGACAGTCCACACTTAGGCACTGAGAGATATTGAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCTTGTTCATTTCTTaGCATTTCCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFLFIS*HFLAAS
Trigger: AGAAGCAGCCAGGAAATGGCAAGAAATGAACAAGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTGATGAAACTGAGATaGTTGGTTTACTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILMKLR*LVYFLG
Trigger: ACCGAGGAAGTAAACCAAGCATCTCAGTTTCATCAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTGATGAAACTGAGATaGTTGGTTTACTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLMKLR*LVYFLG
Trigger: ACCGAGGAAGTAAACCAAGCATCTCAGTTTCATCAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTGATGAAACTGAGATaGTTGGTTTACTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLMKLR*LVYFLG
Trigger: ACCGAGGAAGTAAACCAAGCATCTCAGTTTCATCAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATCCATCTAATGGACTaGACCTCTCCCTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTIHLMD*TSPFRI
Trigger: AATTCTGAAGGGAGAGGTGCAGTCCATTAGATGGAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTATTCATCTCTAAGATaGTGTTCTCCTGTAGTATCA +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGYSSLR*CSPVVS
Trigger: TGATACTACAGGAGAACAGCATCTTAGAGATGAATA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATATTCATCTCTAAGATaGTGTTCTCCTGTAGTATCA +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSYSSLR*CSPVVS
Trigger: TGATACTACAGGAGAACAGCATCTTAGAGATGAATA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTTTCTTCACTTCCTaGAAGTTTCCCTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFFFTS*KFPSVR
Trigger: TCTGACAGAGGGAAACTTCCAGGAAGTGAAGAAAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGTTGTCATTTCAGGTaGCCACTTAGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGCHFR*PLRFTH
Trigger: ATGAGTAAACCTAAGTGGCCACCTGAAATGACAACC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTAGCTGTACATTCATaGCTCAGAGCATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLAVHS*LRASKP
Trigger: AGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTAGCTGTACATTCATaGCTCAGAGCATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLAVHS*LRASKP
Trigger: AGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTAGTCGAAACCTTTaGAATCTCTTCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLSRNL*NLFILR
Trigger: CCTGAGGATGAAGAGATTCCAAAGGTTTCGACTAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATATTTCCTTGTCTTaGAGCAGCAGCTTCTTAATC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHISLS*SSSFLI
Trigger: GATTAAGAAGCTGCTGCTCCAAGACAAGGAAATATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCATATTTCCTTGTCTTaGAGCAGCAGCTTCTTAATC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHISLS*SSSFLI
Trigger: GATTAAGAAGCTGCTGCTCCAAGACAAGGAAATATG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTGAAACGCAAGAAGTaGAAGAGGTACTCACAACTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLKRKK*KRYSQL
Trigger: CAGTTGTGAGTACCTCTTCCACTTCTTGCGTTTCAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGAATGTCTAATGGCTaGGTTTCAAACATCCAACAC +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKRMSNG*VSNIQH
Trigger: GTGTTGGATGTTTGAAACCCAGCCATTAGACATTCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATGCTTTCATCAAACTaGTCAATGGGCCTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKMLSSN*SMGLVS
Trigger: TGAAACAAGGCCCATTGACCAGTTTGATGAAAGCAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGAGACTCCATTGGCTaGGTCTCAAAAAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTRDSIG*VSKSHL
Trigger: TAAATGGCTTTTTGAGACCCAGCCAATGGAGTCTCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATAAAGAGACTCCATTaGCTGGGTCTCAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTIKRLH*LGLKKP
Trigger: TGGCTTTTTGAGACCCAGCCAATGGAGTCTCTTTAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTGAATTGCATAGAGTaGCTGGGTTTCAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLNCIE*LGFKEH
Trigger: ATGCTCTTTGAAACCCAGCCACTCTATGCAATTCAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTGAATTGCATAGAGTaGCTGGGTTTCAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILNCIE*LGFKEH
Trigger: ATGCTCTTTGAAACCCAGCCACTCTATGCAATTCAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACAGTACAGTCCCTTTTaGAAAGTAGGTTCACCATTA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKQYSPF*KVGSPL
Trigger: TAATGGTGAACCTACTTTCCAAAAGGGACTGTACTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAGTACAGTCCCTTTTaGAAAGTAGGTTCACCATTA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQYSPF*KVGSPL
Trigger: TAATGGTGAACCTACTTTCCAAAAGGGACTGTACTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCAAAAGCTGCCACATTaGTTGAAGGTTTATATTCTT +
Preference number: 4 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGQKLPH*LKVYIL
Trigger: AAGAATATAAACCTTCAACCAATGTGGCAGCTTTTG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAAAATTCTGAGTCTGTaGATCAAGATGTGCATCGAT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKKILSL*IKMCID
Trigger: ATCGATGCACATCTTGATTCACAGACTCAGAATTTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCTCTTGTATGCCCTTaGCTTCGAGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSLVCP*LRDIFL
Trigger: AAGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTTCTATCTTAATTTaGCGACGAAGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVSILI*RRSVAG
Trigger: TCCTGCAACACTTCGTCGTCAAATTAAGATAGAAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATGCTCAAATTCCCTaGACCATCTGTTTATTTCAT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHAQIP*TICLFH
Trigger: ATGAAATAAACAGATGGTTCAGGGAATTTGAGCATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCAAGAAATATCCCATTaGGATAGACACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIQEISH*DRHEIS
Trigger: AGAAATCTCGTGTCTATCTCAATGGGATATTTCTTG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAAGAAATATCCCATTaGGATAGACACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQEISH*DRHEIS
Trigger: AGAAATCTCGTGTCTATCTCAATGGGATATTTCTTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGTTTGCACCTCAGGTaGTTCAATTTTATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGLHLR*FNFISE
Trigger: CTCTGAAATAAAATTGAATCACCTGAGGTGCAAACC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCTCAGGTGTATCAATaGCAGTTTCTTGAACATATT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPQVYQ*QFLEHI
Trigger: AATATGTTCAAGAAACTGTCATTGATACACCTGAGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCTCAGGTGTATCAATaGCAGTTTCTTGAACATATT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPQVYQ*QFLEHI
Trigger: AATATGTTCAAGAAACTGTCATTGATACACCTGAGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGAGGAAGTGACACTGTaGTCACTATATCTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTEEVTL*SLYLVV
Trigger: AACTACAAGATATAGTGATCACAGTGTCACTTCCTC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACTGATAGTTACCGCTaGTTCTTCTTGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTDSYR*FFLTLM
Trigger: CATCAAAGTCAAGAAGAATCAGCGGTAACTATCAGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAATGATGACCTCTTCTaGCTCTTTGATTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRNDDLF*LFDFLQ
Trigger: TTGGAGAAAATCAAAGAGTCAGAAGAGGTCATCATT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCTGCACATCTTCCTaGGTGACTGTCTTGATATTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFCTSS*VTVLIF
Trigger: AAATATCAAGACAGTCACTCAGGAAGATGTGCAGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATATGAATGGTACGTTTaGCATCACCACCTATTACTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKYEWYV*HHHLLL
Trigger: AAGTAATAGGTGGTGATGTCAAACGTACCATTCATA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTCCAGGTCATCTTTaGGAAGCTCCTTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFPGHL*EAPFSE
Trigger: TTCTGAAAAAGGAGCTTCTCAAAGATGACCTGGAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTGTTCACGATCTATaGCAATCTTTACAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFVHDL*QSLQCL
Trigger: AAGGCACTGTAAAGATTGTCATAGATCGTGAACAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAACCCGTTTTGTCTCCTaGTTCCAAAACATTAGATTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKTRFVS*FQNIRF
Trigger: AAATCTAATGTTTTGGAATCAGGAGACAAAACGGGT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTAGGACTCTTTATATaGAAACCCTCCATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLGLFI*KPSIFW
Trigger: CCAGAAAATGGAGGGTTTTCATATAAAGAGTCCTAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAGCTGCCACATTGGTTaGAGGTTTATATTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISCHIG*RFIFFF
Trigger: GAAAAAGAATATAAACCTTCAACCAATGTGGCAGCT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR TCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGCTGCCACATTGGTTaGAGGTTTATATTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSCHIG*RFIFFF
Trigger: GAAAAAGAATATAAACCTTCAACCAATGTGGCAGCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGACATTTTTCTTCCTaGAGACTATTATATGGCTGG +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRHFSS*RLLYGW
Trigger: CCAGCCATATAATAGTCTGCAGGAAGAAAAATGTCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGAAGGGGAAGTGTTTaGTCTGTGAATTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRRGSV*SVNFRF
Trigger: AAATCTGAAATTCACAGAGCAAACACTTCCCCTTCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGCGGATGATTTCAACTaGATCATAACTTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTADDFN*IITFSV
Trigger: GACACTGAAAGTTATGATGCAGTTGAAATCATCCGC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTCTCAAATGCATCCATaGCTGAGAAATGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFISQMHP*LRNVHL
Trigger: TAAGTGAACATTTCTCAGGCATGGATGCATTTGAGA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCTCAAATGCATCCATaGCTGAGAAATGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSQMHP*LRNVHL
Trigger: TAAGTGAACATTTCTCAGGCATGGATGCATTTGAGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTGTGTTTTCATTATTaGGGGCAGCTTCTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLCFHY*GQLLLF
Trigger: AAACAACAGAAGCTGCCCGCAATAATGAAAACACAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTGTTTCTTTTAATCTaGTCTTCCACCGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLFLLI*SSTVSC
Trigger: ACAACTCACGGTGGAAGAGCAGATTAAAAGAAACAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCTTGTTCATTTCTTaGCATTTCCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFLFIS*HFLAAS
Trigger: AGAAGCAGCCAGGAAATGGCAAGAAATGAACAAGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGTTCATATGTCTGTTaGTTTCCAACGGTTTTACCA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSSYVC*FPTVLP
Trigger: TGGTAAAACCGTTGGAAAGCAACAGACATATGAACT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTTGGGAATATTGTTaGATGAAGTCTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFWEYC*MKSPLC
Trigger: GCACAGTGGAGACTTCATGCAACAATATTCCCAAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTGTCACTTATAAATaGAGATTCCTCTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLVTYK*RFLLEG
Trigger: ACCTTCCAAGAGGAATCTGCATTTATAAGTGACAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTGCCAGTTCAACTTTaGGGGAAAAATCGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLPVQL*GKNRSY
Trigger: ATAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTTTCTTCACTTCCTaGAAGTTTCCCTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFFFTS*KFPSVR
Trigger: TCTGACAGAGGGAAACTTCCAGGAAGTGAAGAAAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAAGGCCACTTTTATTTaGCTCTGCTTCAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKKATFI*LCFKLF
Trigger: AAACAGTTTGAAGCAGAGCCAAATAAAAGTGGCCTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCCACTGATCTGCTTTaGTTTTTGCAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSTDLL*FLQFHL
Trigger: TAGATGGAACTGCAAAAACCAAAGCAGATCAGTGGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTAGCTGTACATTCATaGCTCAGAGCATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLAVHS*LRASKP
Trigger: AGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTTGATGGAATCCAATaGTTGATTCTCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVDGIQ*LILKDP
Trigger: TGGATCTTTGAGAATCAACCATTGGATTCCATCAAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTAATTTCCAGCATTTaGCCCGAACCATCTCTAATA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLISSI*PEPSLI
Trigger: TATTAGAGATGGTTCGGGCCAAATGCTGGAAATTAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTAATTTCCAGCATTTaGCCCGAACCATCTCTAATA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLISSI*PEPSLI
Trigger: TATTAGAGATGGTTCGGGCCAAATGCTGGAAATTAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTTTATGGTATCAAGTaGCTGAGTTTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFYGIK*LSFKEP
Trigger: TGGCTCTTTGAAACTCAGCCACTTGATACCATAAAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATTTATACCTCATGCTaGAAACATCTCCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKIYTSC*KHLQLV
Trigger: TACAAGCTGGAGATGTTTCCAGCATGAGGTATAAAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAGAAATCTGATCCAGTaGCTGAGTTTCAAATCTGTA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIRNLIQ*LSFKSV
Trigger: TACAGATTTGAAACTCAGCCACTGGATCAGATTTCT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTGCCACCTTGTATATaGTCAATACTGGGCATAATA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLPPCI*SILGII
Trigger: TATTATGCCCAGTATTGACCATATACAAGGTGGCAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGATTCTTTCCATCGATaGCTTGATTCTTTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIDSFHR*LDSLSD
Trigger: GTCACTTAAAGAATCAAGCCATCGATGGAAAGAATC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAAATGGACCTGGCTTTaGCTGAAGAAGACTATTTTT +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIKWTWL*LKKTIF
Trigger: AAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCTACTAAATTGCCATaGCAAGATTTCCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSTKLP*QDFPIV
Trigger: AACTATGGGGAAATCTTGCCATGGCAATTTAGTAGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAAACCCTCCATTTTCTaGTGGTCATTTCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTKPSIF*WSFLSS
Trigger: TGAACTGAGAAATGACCACCAGAAAATGGAGGGTTT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCATTTCTGTTACATTaGATGTGTCTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSFLLH*MCLALQ
Trigger: CTGTAGAGCAAGACACATCCAATGTAACAGAAATGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAGGGTTAAAGTTGATTaGATTCAAGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIRVKVD*IQGPFH
Trigger: ATGGAAAGGTCCTTGAATCCAATCAACTTTAACCCT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTATCTTTTATATGCTTaGGAAGTTTGGGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIYLLYA*EVWVWA
Trigger: TGCCCAAACCCAAACTTCCCAAGCATATAAAAGATA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATATCTTTTATATGCTTaGGAAGTTTGGGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKYLLYA*EVWVWA
Trigger: TGCCCAAACCCAAACTTCCCAAGCATATAAAAGATA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAAAATTCTGAGTCTGTaGATCAAGATGTGCATCGAT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTKILSL*IKMCID
Trigger: ATCGATGCACATCTTGATTCACAGACTCAGAATTTT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACATGCTCAAATTCCCTaGACCATCTGTTTATTTCAT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHAQIP*TICLFH
Trigger: ATGAAATAAACAGATGGTTCAGGGAATTTGAGCATG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAAGAAATATCCCATTaGGATAGACACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQEISH*DRHEIS
Trigger: AGAAATCTCGTGTCTATCTCAATGGGATATTTCTTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGCCAAGTACAAGTTTTaGCATCTCCCTTATGAATTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTAKYKF*HLPYEF
Trigger: AAATTCATAAGGGAGATGTCAAAACTTGTACTTGGC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR TCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTAGGACTCTTTATATaGAAACCCTCCATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLGLFI*KPSIFW
Trigger: CCAGAAAATGGAGGGTTTTCATATAAAGAGTCCTAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACATGGCAATGTGAACTaGATATTCTCTCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHGNVN*IFSLIF
Trigger: GAAGATAAGAGAGAATATGCAGTTCACATTGCCATG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCATCTATCTTTATGCTaGTTATGTCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHLSLC*LCPKPS
Trigger: TGAAGGTTTTGGACATAAGCAGCATAAAGATAGATG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATCTATCTTTATGCTaGTTATGTCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHLSLC*LCPKPS
Trigger: TGAAGGTTTTGGACATAAGCAGCATAAAGATAGATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSVVST*QGLTSF
Trigger: AAAGGATGTTAAACCTTGGCATGTTGAAACAACAGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSVVST*QGLTSF
Trigger: AAAGGATGTTAAACCTTGGCATGTTGAAACAACAGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTATTCATCTCTAAGATaGTGTTCTCCTGTAGTATCA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIYSSLR*CSPVVS
Trigger: TGATACTACAGGAGAACAGCATCTTAGAGATGAATA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTAAAGGATGCAACTTaGCACCTATTTTTAGGAACT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLKDAT*HLFLGT
Trigger: AGTTCCTAAAAATAGGTGCCAAGTTGCATCCTTTAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409273.6
ENST00000409605.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTGATGGAATCCAATaGTTGATTCTCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVDGIQ*LILKDP
Trigger: TGGATCTTTGAGAATCAACCATTGGATTCCATCAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATTGAATCAAGAGGTTaGGTTTCAAACAACCATTTG +
Preference number: 4 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKIESRG*VSNNHL
Trigger: CAAATGGTTGTTTGAAACCCAACCTCTTGATTCAAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTATTGAATCAAGAGGTTaGGTTTCAAACAACCATTTG +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIIESRG*VSNNHL
Trigger: CAAATGGTTGTTTGAAACCCAACCTCTTGATTCAAT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTTATGGTATCAAGTaGCTGAGTTTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFYGIK*LSFKEP
Trigger: TGGCTCTTTGAAACTCAGCCACTTGATACCATAAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATTTATACCTCATGCTaGAAACATCTCCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTIYTSC*KHLQLV
Trigger: TACAAGCTGGAGATGTTTCCAGCATGAGGTATAAAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGAAATCTGATCCAGTaGCTGAGTTTCAAATCTGTA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTRNLIQ*LSFKSV
Trigger: TACAGATTTGAAACTCAGCCACTGGATCAGATTTCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTGCCACCTTGTATATaGTCAATACTGGGCATAATA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLPPCI*SILGII
Trigger: TATTATGCCCAGTATTGACCATATACAAGGTGGCAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGTTTTACCAGCAGATTaGATGGAATTAAAGACATCA +
Preference number: 4 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIVLPAD*MELKTS
Trigger: TGATGTCTTTAATTCCATCCAATCTGCTGGTAAAAC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTTTTACCAGCAGATTaGATGGAATTAAAGACATCA +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVLPAD*MELKTS
Trigger: TGATGTCTTTAATTCCATCCAATCTGCTGGTAAAAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAAAAGCTGCCACATTaGTTGAAGGTTTATATTCTT +
Preference number: 4 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQKLPH*LKVYIL
Trigger: AAGAATATAAACCTTCAACCAATGTGGCAGCTTTTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACTACATTCAGTGCTTaGTTCAGTTTTCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTTFSA*FSFLGF
Trigger: AAAACCAAGAAAACTGAAGCAAGCACTGAATGTAGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACATCTATCTTTATGCTaGTTATGTCCAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHLSLC*LCPKPS
Trigger: TGAAGGTTTTGGACATAAGCAGCATAAAGATAGATG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCCATCTATCTTTATaGTGCTTATGTCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFHLSL*CLCPKP
Trigger: AGGTTTTGGACATAAGCAGCATAAAGATAGATGGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR GCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCTGTTGTTTCAACATaGCAAGGTTTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSVVST*QGLTSF
Trigger: AAAGGATGTTAAACCTTGGCATGTTGAAACAACAGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATAAGGCTGCAAAAATaGAAAGTGATCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTIRLQK*KVILSL
Trigger: CAAAGACAAGATCACTTTCCATTTTTGCAGCCTTAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CCA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTTTACCAGCAGATTaGATGGAATTAAAGACATCA +
Preference number: 4 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVLPAD*MELKTS
Trigger: TGATGTCTTTAATTCCATCCAATCTGCTGGTAAAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS CCA 90 bp GCTGCCTGGTACCTCGCCATCCGCTCCTTCAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCGCCCCGAGCAGCACTGTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: AAWYLAIRSFRETTS*RSDTPSPRAALSSA
Trigger: TGCAGAAGACAGTGCTGCTCGGGGCGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCTGAAGGAGCGGATGGCGAGGTACCAGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CCA 90 bp ATATTAGCAGAGAAGCTGCGGCAGTCACCCCTGGAAACAGCTGCCTaGTACCTCGCCATCCGCTCCTTCAGGGAGACCACTTCGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ILAEKLRQSPLETAA*YLAIRSFRETTSWR
Trigger: CCTCCACGAAGTGGTCTCCCTGAAGGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCAGCTTCTCTGCTAATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS GCA 90 bp CATCATATTAGCAGAGAAGCTGCGGCAGTCACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCGCTCCTTCAGGGAGACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: HHISREAAAVTPGNS*LVPRHPLLQGDHFV
Trigger: CACGAAGTGGTCTCCCTGAAGGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCAGCTTCTCTGCTAATATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS GCA 90 bp ACACACTCCTCAGCTCATCAAGGGCAATGGAAAAGCGTTCAATCCTaGGCCGACTGCTCAGGGAATCCTCCTTCAGCACTTCTGGCCGAC +
Preference number: 5 (lower is better)
Translates to: THSSAHQGQWKSVQS*ADCSGNPPSALLAD
Trigger: GTCGGCCAGAAGTGCTGAAGGAGGATTCCCTGAGCAGTCGGCGCAGGATTGAACGCTTTTCCATTGCCCTTGATGAGCTGAGGAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS TCA 90 bp CTAGCTTCCTCCCTTGTTTCATGTACAGCCAATTTCCCAGTCCCCTaGAAGCAATGGGTGCAGTGGAGGCCCGCTCCACTGAAGGGTCTA +
Preference number: 5 (lower is better)
Translates to: LASSLVSCTANFPVP*KQWVQWRPAPLKGL
Trigger: TAGACCCTTCAGTGGAGCGGGCCTCCACTGCACCCATTGCTTTCAGGGGACTGGGAAATTGGCTGTACATGAAACAAGGGAGGAAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS GCA 90 bp TCAGCTCATCAAGGGCAATGGAAAAGCGTTCAATCCTGCGCCGACTaGTCAGGGAATCCTCCTTCAGCACTTCTGGCCGACCATATTCCC +
Preference number: 5 (lower is better)
Translates to: SAHQGQWKSVQSCAD*SGNPPSALLADHIP
Trigger: GGGAATATGGTCGGCCAGAAGTGCTGAAGGAGGATTCCCTGAGCAGTCGGCGCAGGATTGAACGCTTTTCCATTGCCCTTGATGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS GCA 90 bp GAAGTCTCCACTGTGCTTTTCCGGAGCAGAGGAGGAAAGGAGATGTaGTGGCTTTTGAGATGGAGTTGGAGGAGGAGGAGGCGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: EVSTVLFRSRGGKEM*WLLRWSWRRRRRQK
Trigger: TTTCTGCCGCCTCCTCCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCCTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGCTCCCCCTTGCCACTaGGCCGCTGGCTCAAATGGA +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWAPPCH*AAGSNG
Trigger: TCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp TCTGAAAGTCCCCTGAAAGGTCGTAAGTTCCTCCAACTGGCATGCTaGCTGGATGCTGGGTGGGACTGGGCTTGGAGCTTTGTGTATCAG +
Preference number: 5 (lower is better)
Translates to: SESPLKGRKFLQLAC*LDAGWDWAWSFVYQ
Trigger: CTGATACACAAAGCTCCAAGCCCAGTCCCACCCAGCATCCAGTCAGCATGCCAGTTGGAGGAACTTACGACCTTTCAGGGGACTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp CTGTGCTTTTCCGGAGCAGAGGAGGAAAGGAGATGTGCTGGCTTTTaGGATGGAGTTGGAGGAGGAGGAGGCGGCAGAAACATCGATGAA +
Preference number: 5 (lower is better)
Translates to: LCFSGAEEERRCAGF*DGVGGGGGGRNIDE
Trigger: TTCATCGATGTTTCTGCCGCCTCCTCCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCCTCCTCTGCTCCGGAAAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGTATCTGCTCCCCCTaGCCACTTGGCCGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSICSP*PLGRWL
Trigger: GAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp CATTTGAACAGTTCGGTTGGCCGCTTCATATCTCTGTGTGTGCTCTaGCAGGCGAGGAGGCACTGCAACCTTGCGGATGATTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: HLNSSVGRFISLCVL*QARRHCNLADDFNC
Trigger: GCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTGTCAGAGCACACACAGAGATATGAAGCGGCCAACCGAACTGTTCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp GCTTCGAACTCCACATCTCTTCCCCTGTACTGTAGGGCAGACTTGTaGGATCCAAAGATTGAGGTGCTGATACTACCTCTCCTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: ASNSTSLPLYCRADL*DPKIEVLILPLLQA
Trigger: CGCCTGAAGGAGAGGTAGTATCAGCACCTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTACAGGGGAAGAGATGTGGAGTTCGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CCA 90 bp TGCTCAGGGAATCCTCCTTCAGCACTTCTGGCCGACCATATTCCCTaGTGTTGTTACTCTTGTCCACAGAATCCTTCTCTTCCGGCTTCG +
Preference number: 5 (lower is better)
Translates to: CSGNPPSALLADHIP*CCYSCPQNPSLPAS
Trigger: CGAAGCCGGAAGAGAAGGATTCTGTGGACAAGAGTAACAACACCAGGGAATATGGTCGGCCAGAAGTGCTGAAGGAGGATTCCCTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CCA 90 bp AGTATCTGCTCCCCCTTGCCACTTGGCCGCTGGCTCAAATGGACCTaGCTTTGGCTGAAGAAGACTATTTTTGTTCCTCTGGACAGCAAC +
Preference number: 5 (lower is better)
Translates to: SICSPLPLGRWLKWT*LWLKKTIFVPLDSN
Trigger: GTTGCTGTCCAGAGGAACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGGAGCCCTTCTGCATaGGGAACATGGATGGGTCCA +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGSPSA*GTWMGP
Trigger: TGGACCCATCCATGTTCCCAATGCAGAAGGGCTCCC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS TCA 90 bp TCTGTGTGTGCTCTGACAGGCGAGGAGGCACTGCAACCTTGCGGATaGTTTCAACTGCATCATAACTTTCAGTGTCGGGCACCATGTGAT +
Preference number: 5 (lower is better)
Translates to: SVCALTGEEALQPCG*FQLHHNFQCRAPCD
Trigger: ATCACATGGTGCCCGACACTGAAAGTTATGATGCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTGTCAGAGCACACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp CCCTGTACTGTAGGGCAGACTTGTGGGATCCAAAGATTGAGGTGCTaGTACTACCTCTCCTTCAGGCGCAAGCAATTTGCTTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: PCTVGQTCGIQRLRC*YYLSFRRKQFAFLR
Trigger: CCTCAGGAAAGCAAATTGCTTGCGCCTGAAGGAGAGGTAGTATCAGCACCTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS GCA 90 bp GTTGAGGATTTGAGGCTGTTCTTGGGGGTCTTTGTCAATTTTGGATaGAGGTGGAGCCTGAGAATCTGGGCTTGGTCCGTGGAGAACACT +
Preference number: 5 (lower is better)
Translates to: VEDLRLFLGVFVNFG*RWSLRIWAWSVENT
Trigger: AGTGTTCTCCACGGACCAAGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATTGACAAAGACCCCCAAGAACAGCCTCAAATCCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCACATGGTGGAGCCTCTaGGCAGCGACTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSTWWSL*AATVSG
Trigger: GCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCAATTGGAACCGGGGTaGCTGCTGGACATGGGATGG +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLQLEPG*LLDMGW
Trigger: CCATCCCATGTCCAGCAGCAACCCCGGTTCCAATTG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp CACTTCTCTGATAATCACAAGATTCCCATTTCTGCCTCAGGAGGTTaGGGGAGCCCTTCTGCATTGGGAACATGGATGGGTCCAGGTTGT +
Preference number: 5 (lower is better)
Translates to: HFSDNHKIPISASGG*GSPSALGTWMGPGC
Trigger: ACAACCTGGACCCATCCATGTTCCCAATGCAGAAGGGCTCCCTCAACCTCCTGAGGCAGAAATGGGAATCTTGTGATTATCAGAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS GCA 90 bp GACAAGTTGTTCAGAGCGACTCCTGGGTGGAGAAGGGGAAGTGTTTaGTCTGTGAATTTCAGATTTTTGCGACATGGGCCTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: DKLFRATPGWRRGSV*SVNFRFLRHGPSWW
Trigger: CCACCAAGAAGGCCCATGTCGCAAAAATCTGAAATTCACAGAGCAAACACTTCCCCTTCTCCACCCAGGAGTCGCTCTGAACAACTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp TTTCACAGAATCCTCCAGCTGGCTCCCAGGGTGACTCTTAAAAGCTaGCGAGCACAAACTTCGCTCAATTTCCACTTCCTTTCCACCGTA +
Preference number: 5 (lower is better)
Translates to: FHRILQLAPRVTLKS*RAQTSLNFHFLSTV
Trigger: TACGGTGGAAAGGAAGTGGAAATTGAGCGAAGTTTGTGCTCGCCAGCTTTTAAGAGTCACCCTGGGAGCCAGCTGGAGGATTCTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTATCTGACAGGGAGGTaGCCAGTTCAACTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWYLTGR*PVQLWG
Trigger: CCCCCAAAGTTGAACTGGCAACCTCCCTGTCAGATA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCCCGGTTTTCCTGTTTaGGAGGACATCATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWPGFPV*EDIMAV
Trigger: GACAGCCATGATGTCCTCCAAAACAGGAAAACCGGG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGCGACATGGGCCTTCTaGGTGGGGGTTCAACATAAC +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSATWAF*VGVQHN
Trigger: GTTATGTTGAACCCCCACCAAGAAGGCCCATGTCGC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGTTGGTGGGGCATGCTaGAAGTCACAGCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWVGGAC*KSQPDL
Trigger: CAAATCTGGCTGTGACTTCAAGCATGCCCCACCAAC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGCTCCCCCTTGCCACTaGGCCGCTGGCTCAAATGGA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSAPPCH*AAGSNG
Trigger: TCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGTATCTGCTCCCCCTaGCCACTTGGCCGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSICSP*PLGRWL
Trigger: GAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGTATCTGCTCCCCCTaGCCACTTGGCCGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSICSP*PLGRWL
Trigger: GAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS TCA 90 bp GTTCTTTCTTCTACTAAATTGCCATGGCAAGATTTCCCCATAGTTTaGCTGAGAGTATCTGCTCCCCCTTGCCACTTGGCCGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: VLSSTKLPWQDFPIV*LRVSAPPCHLAAGS
Trigger: TGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAAACTATGGGGAAATCTTGCCATGGCAATTTAGTAGAAGAAAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp ATCTGGGCTTGGTCCGTGGAGAACACTGCTTCAAAGATGCGGCTGTaGCCACTTTCAGGTGACATCTTGTCAAAAGATGTTTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: IWAWSVENTASKMRL*PLSGDILSKDVSLP
Trigger: AGGCAAGGAAACATCTTTTGACAAGATGTCACCTGAAAGTGGTCACAGCCGCATCTTTGAAGCAGTGTTCTCCACGGACCAAGCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS GCA 90 bp CTCTTGGAAGGTGGTTCTCATCTCAGTTGCAGAAGCATCTGCGGTTaGATATCCCAGGCCTTTAAAAACTCTTCCACTCTCTTGCCACGT +
Preference number: 5 (lower is better)
Translates to: LLEGGSHLSCRSICG*ISQAFKNSSTLLPR
Trigger: ACGTGGCAAGAGAGTGGAAGAGTTTTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCTGCAACTGAGATGAGAACCACCTTCCAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp AAACATGGTGGAGCCTCTTGGCAGCGACTGTTTCTGGCGATGTTGTaGAGAGTTGGTTATCAGAACACACTCCTAGTATCCGAGCATTAC +
Preference number: 5 (lower is better)
Translates to: KHGGASWQRLFLAML*RVGYQNTLLVSEHY
Trigger: GTAATGCTCGGATACTAGGAGTGTGTTCTGATAACCAACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp TTTCAGGGTCATTCACGAAATTTTCAGCCATTTGAACAGTTCGGTTaGCCGCTTCATATCTCTGTGTGTGCTCTGACAGGCGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: FQGHSRNFQPFEQFG*PLHISVCALTGEEA
Trigger: TGCCTCCTCGCCTGTCAGAGCACACACAGAGATATGAAGCGGCCAACCGAACTGTTCAAATGGCTGAAAATTTCGTGAATGACCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp CATAGTTTGACTGAGAGTATCTGCTCCCCCTTGCCACTTGGCCGCTaGCTCAAATGGACCTGGCTTTGGCTGAAGAAGACTATTTTTGTT +
Preference number: 5 (lower is better)
Translates to: HSLTESICSPLPLGR*LKWTWLWLKKTIFV
Trigger: AACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAAACTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTTGAGTCTGACAAGTaGTTCAGAGCGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFESDK*FRATPG
Trigger: CCCAGGAGTCGCTCTGAACAACTTGTCAGACTCAAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACCTCTTCTCTACAATaGGAACCGGGGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTSSLQ*EPGLLL
Trigger: CAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGGAGGCACTGCAACCTaGCGGATGATTTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSGGTAT*RMISTA
Trigger: TGCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGTTGGTGGGGCATGCTaGAAGTCACAGCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSVGGAC*KSQPDL
Trigger: CAAATCTGGCTGTGACTTCAAGCATGCCCCACCAAC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGTTGGTGGGGCATGCTaGAAGTCACAGCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLVGGAC*KSQPDL
Trigger: CAAATCTGGCTGTGACTTCAAGCATGCCCCACCAAC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCAGGGGATAGCAGGGTaGTCATTTCAGGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIQGIAG*SFQVAT
Trigger: AGTGGCCACCTGAAATGACAACCCTGCTATCCCCTG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTGCGGGCAGCTTCTGTaGTTTCAACATGCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWCGQLL*FQHAKV
Trigger: AACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTTCCTGGCTGCTTCTaGAAGTGCCAACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFPGCF*KCQPGC
Trigger: GCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGAGATGTGCTGGCTTTaGAGATGGAGTTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLEMCWL*RWSWRR
Trigger: CCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp TTCTTGTCTGAATCTTTCACAGAATCCTCCAGCTGGCTCCCAGGGTaGCTCTTAAAAGCTGGCGAGCACAAACTTCGCTCAATTTCCACT +
Preference number: 5 (lower is better)
Translates to: FLSESFTESSSWLPG*LLKAGEHKLRSIST
Trigger: AGTGGAAATTGAGCGAAGTTTGTGCTCGCCAGCTTTTAAGAGTCACCCTGGGAGCCAGCTGGAGGATTCTGTGAAAGATTCAGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
ENST00000672716.1
CDS GCA 90 bp AAGATTGAGGTGCTGATACTACCTCTCCTTCAGGCGCAAGCAATTTaGTTTCCTGAGGCTGGAAAATTGTACAATGGCTGTCCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: KIEVLILPLLQAQAI*FPEAGKLYNGCPWD
Trigger: ATCCCAGGGACAGCCATTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGCTTGCGCCTGAAGGAGAGGTAGTATCAGCACCTCAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CCA 90 bp CCTTGTCTTGGAGCAGCAGCTTCACTTATAAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCAGTTGCAGAAGCATCTGCGGTTGCA +
Preference number: 5 (lower is better)
Translates to: PCLGAAASLINADSS*KVVLISVAEASAVA
Trigger: TGCAACCGCAGATGCTTCTGCAACTGAGATGAGAACCACCTTCCAAGAGGAATCTGCATTTATAAGTGAAGCTGCTGCTCCAAGACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATATCTGACAGGGAGGTaGCCAGTTCAACTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVYLTGR*PVQLWG
Trigger: CCCCCAAAGTTGAACTGGCAACCTCCCTGTCAGATA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCTGTTTCTGGCGATGTaGTGGAGAGTTGGTTATCAG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLFLAM*WRVGYQ
Trigger: CTGATAACCAACTCTCCACAACATCGCCAGAAACAG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTCCTGGGAACCATCTaGAGCTTATCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFLGTI*SLSSWF
Trigger: GAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCCCGGTTTTCCTGTTTaGGAGGACATCATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIPGFPV*EDIMAV
Trigger: GACAGCCATGATGTCCTCCAAAACAGGAAAACCGGG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACATGGGATGGCCCCTTaGGATAACTTTGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVHGMAP*DNFAVV
Trigger: CACCACTGCAAAGTTATCCAAAGGGGCCATCCCATG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCAATTGGAACCGGGGTaGCTGCTGGACATGGGATGG +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNQLEPG*LLDMGW
Trigger: CCATCCCATGTCCAGCAGCAACCCCGGTTCCAATTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGGAGGCACTGCAACCTaGCGGATGATTTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVGGTAT*RMISTA
Trigger: TGCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGTTGGTGGGGCATGCTaGAAGTCACAGCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVVGGAC*KSQPDL
Trigger: CAAATCTGGCTGTGACTTCAAGCATGCCCCACCAAC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTCTTAGGGATCTCCTaGGAAGGAGGCCAAATGACT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFLGIS*EGGQMT
Trigger: AGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTGCGGGCAGCTTCTGTaGTTTCAACATGCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLCGQLL*FQHAKV
Trigger: AACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCTGCTTGGCTGGGGTaGTCATCTCTTTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSAWLG*SSLCQN
Trigger: ATTCTGACAAAGAGATGACAACCCCAGCCAAGCAGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGGAGCCCTTCTGCATaGGGAACATGGATGGGTCCA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGSPSA*GTWMGP
Trigger: TGGACCCATCCATGTTCCCAATGCAGAAGGGCTCCC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTACTGTAGGGCAGACTaGTGGGATCCAAAGATTGAG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWYCRAD*WDPKIE
Trigger: CTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409195.6
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGACTGGTCAATGGGCCTaGTTTCAAAAAGCCACCTAC +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWTGQWA*FQKATY
Trigger: GTAGGTGGCTTTTTGAAACAAGGCCCATTGACCAGT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGCTCCCCCTTGCCACTaGGCCGCTGGCTCAAATGGA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRAPPCH*AAGSNG
Trigger: TCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGCTCCCCCTTGCCACTaGGCCGCTGGCTCAAATGGA +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIAPPCH*AAGSNG
Trigger: TCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS GCA 90 bp GTATCCGAGCATTACTTTGAGAGCCTGGGCTGGGTTGAACCACAGTaGATTCTGAATCAATTCCAGATAGGGAAACCTCCTCATTGGTTT +
Preference number: 5 (lower is better)
Translates to: VSEHYFESLGWVEPQ*ILNQFQIGKPPHWF
Trigger: AAACCAATGAGGAGGTTTCCCTATCTGGAATTGATTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp AGATTCCTCTTGGAAGGTGGTTCTCATCTCAGTTGCAGAAGCATCTaGGGTTGCATATCCCAGGCCTTTAAAAACTCTTCCACTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RFLLEGGSHLSCRSI*GCISQAFKNSSTLL
Trigger: CAAGAGAGTGGAAGAGTTTTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCTGCAACTGAGATGAGAACCACCTTCCAAGAGGAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp CAGAACACACTCCTAGTATCCGAGCATTACTTTGAGAGCCTGGGCTaGGTTGAACCACAGTGCATTCTGAATCAATTCCAGATAGGGAAA +
Preference number: 5 (lower is better)
Translates to: QNTLLVSEHYFESLG*VEPQCILNQFQIGK
Trigger: TTTCCCTATCTGGAATTGATTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATACTAGGAGTGTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp TCTTATCTTTGTCTTCTGAAGCTGCTAAAACATGGTGGAGCCTCTTaGCAGCGACTGTTTCTGGCGATGTTGTGGAGAGTTGGTTATCAG +
Preference number: 5 (lower is better)
Translates to: SYLCLLKLLKHGGAS*QRLFLAMLWRVGYQ
Trigger: CTGATAACCAACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTCAGAAGACAAAGATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp AGTGGTGTCTTTGAGTCTGACAAGTTGTTCAGAGCGACTCCTGGGTaGAGAAGGGGAAGTGTTTGCTCTGTGAATTTCAGATTTTTGCGA +
Preference number: 5 (lower is better)
Translates to: SGVFESDKLFRATPG*RRGSVCSVNFRFLR
Trigger: TCGCAAAAATCTGAAATTCACAGAGCAAACACTTCCCCTTCTCCACCCAGGAGTCGCTCTGAACAACTTGTCAGACTCAAAGACACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGGAAATTGGTTTGCTTaGGGGCAAGTGCAACTGCTC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIGNWFA*GQVQLL
Trigger: GAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCGTGACTACGAACAGTaGCTTCATGATGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLRDYEQ*LHDELL
Trigger: TAGCAGCTCATCATGAAGCAACTGTTCGTAGTCACG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTTGAGTCTGACAAGTaGTTCAGAGCGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFESDK*FRATPG
Trigger: CCCAGGAGTCGCTCTGAACAACTTGTCAGACTCAAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTTGAGTCTGACAAGTaGTTCAGAGCGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFESDK*FRATPG
Trigger: CCCAGGAGTCGCTCTGAACAACTTGTCAGACTCAAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGAAATTTTCAGCCATTaGAACAGTTCGGTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSEIFSH*NSSVGR
Trigger: GCGGCCAACCGAACTGTTCAAATGGCTGAAAATTTC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAGGGGATAGCAGGGTaGTCATTTCAGGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQGIAG*SFQVAT
Trigger: AGTGGCCACCTGAAATGACAACCCTGCTATCCCCTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCAGGGGATAGCAGGGTaGTCATTTCAGGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGQGIAG*SFQVAT
Trigger: AGTGGCCACCTGAAATGACAACCCTGCTATCCCCTG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCCTGTGTTTTCATTATaGCGGGCAGCTTCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWPVFSL*RAASVV
Trigger: AACAACAGAAGCTGCCCGCAATAATGAAAACACAGG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAATTGTTTCTTCACCTaGGCCAAACCACCAGGCACT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLNCFFT*AKPPGT
Trigger: AGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCCTGGCTGCTATGAATaGCCTCCTGCTCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFPGCYE*PPAQIC
Trigger: ACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAGG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTCCTGGCTGCTTCTaGAAGTGCCAACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFPGCF*KCQPGC
Trigger: GCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGATGAAACTGAGATGCTaGGTTTACTTCCTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWMKLRC*VYFLGV
Trigger: CACACCGAGGAAGTAAACCAAGCATCTCAGTTTCAT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCACCAGCAATGATTTCTaGATCAGCAATGCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLTSNDF*ISNAPG
Trigger: TCCAGGGGCATTGCTGATCAAGAAATCATTGCTGGT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAAGTGTGTCGATGGGTaGGGTTTCAAACATCCATGT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWKCVDG*GFKHPC
Trigger: ACATGGATGTTTGAAACCCAACCCATCGACACACTT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCATAAAGAGACTCCATaGGCTGGGTCTCAAAAAGCC +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSHKETP*AGSQKA
Trigger: GGCTTTTTGAGACCCAGCCAATGGAGTCTCTTTATG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTTCAAAAAGCCACCTaGTTCCTCGCACATCTCCAT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFQKAT*FLAHLH
Trigger: ATGGAGATGTGCGAGGAACAAGGTGGCTTTTTGAAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAGCCATGTGGTTGTTTaGACATCAGAAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSHVVV*TSEGGI
Trigger: AATCCCTCCTTCTGATGTCAAAACAACCACATGGCT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGTATCTGCTCCCCCTaGCCACTTGGCCGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSICSP*PLGRWL
Trigger: GAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS TCA 90 bp GAGAATTCTGAGAGTTCGAGGCTTCTTTTTGGGAATATTGTTGCATaGAGTCTCCACTGTGCTTTTCCGGAGCAGAGGAGGAAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: ENSESSRLLFGNIVA*SLHCAFPEQRRKGD
Trigger: ATCTCCTTTCCTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTCATGCAACAATATTCCCAAAAAGAAGCCTCGAACTCTCAGAATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp TCACTTCCTGGAAGTTTCCCTCTGTCAGATCCGCTAAATTCTCTTTaGTTCCTGGGAACCATCTTGAGCTTATCTTCCTGGTTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SLPGSFPLSDPLNSL*FLGTILSLSSWFFC
Trigger: ACAGAAGAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAAGCAAAGAGAATTTAGCGGATCTGACAGAGGGAAACTTCCAGGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp TCCTTTTTCATCTTATCTTTGTCTTCTGAAGCTGCTAAAACATGGTaGAGCCTCTTGGCAGCGACTGTTTCTGGCGATGTTGTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: SFFILSLSSEAAKTW*SLLAATVSGDVVES
Trigger: ACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTCAGAAGACAAAGATAAGATGAAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGTTGCCAGTTCAACTTaGGGGGAAAAATCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWVASST*GEKSFL
Trigger: TAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAAC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTATCTGACAGGGAGGTaGCCAGTTCAACTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGYLTGR*PVQLWG
Trigger: CCCCCAAAGTTGAACTGGCAACCTCCCTGTCAGATA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATATCCGAGCATTACTTaGAGAGCCTGGGCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSYPSIT*RAWAGL
Trigger: CAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACGATGTTGTGGAGAGTaGGTTATCAGAACACACTCC +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVRCCGE*VIRTHS
Trigger: GGAGTGTGTTCTGATAACCAACTCTCCACAACATCG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTACATGGTGGAGCCTCTaGGCAGCGACTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQITWWSL*AATVSG
Trigger: GCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAACATGGTGGAGCCTCTaGGCAGCGACTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKTWWSL*AATVSG
Trigger: GCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGACATGGTGGAGCCTCTaGGCAGCGACTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRTWWSL*AATVSG
Trigger: GCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGGAAATTGGTTTGCTTaGGGGCAAGTGCAACTGCTC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFGNWFA*GQVQLL
Trigger: GAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTTGGGGAAATTGGTTaGCTTTGGGGCAAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFGEIG*LWGKCN
Trigger: GTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGATTCTGTAGGCAATaGTACTGTCACTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGFCRQ*YCHSFL
Trigger: GAGAAAAGAGTGACAGTACAATTGCCTACAGAATCC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGAAGACTTGTTTCTCTaGTATGCCCTTGACTTCGAG +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSEDLFL*YALDFE
Trigger: CTCGAAGTCAAGGGCATACAAGAGAAACAAGTCTTC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACGTGACTACGAACAGTaGCTTCATGATGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVRDYEQ*LHDELL
Trigger: TAGCAGCTCATCATGAAGCAACTGTTCGTAGTCACG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTGAGTCTGACAAGTaGTTCAGAGCGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFESDK*FRATPG
Trigger: CCCAGGAGTCGCTCTGAACAACTTGTCAGACTCAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACAATTGGAACCGGGGTaGCTGCTGGACATGGGATGG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKQLEPG*LLDMGW
Trigger: CCATCCCATGTCCAGCAGCAACCCCGGTTCCAATTG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCACCTCTTCTCTACAATaGGAACCGGGGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFTSSLQ*EPGLLL
Trigger: CAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGGT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAACCTCTTCTCTACAATaGGAACCGGGGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSTSSLQ*EPGLLL
Trigger: CAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGGT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTTCCTGATTTCCTCTaGAGCGTCCACAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSFPDFL*SVHRFS
Trigger: AGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGGAGGCACTGCAACCTaGCGGATGATTTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNGGTAT*RMISTA
Trigger: TGCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAAGTCACAGCCAGATTaGCCAGCTTCTGAGCTATGT +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIKSQPD*PASELC
Trigger: ACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACTT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAAGTCACAGCCAGATTaGCCAGCTTCTGAGCTATGT +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVKSQPD*PASELC
Trigger: ACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACTT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCCACTAGGCACTCCATaGGATAAACTGTCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLPLGTP*DKLSFD
Trigger: GTCAAAAGACAGTTTATCCAATGGAGTGCCTAGTGG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCCTGGCTGCTATGAATaGCCTCCTGCTCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNPGCYE*PPAQIC
Trigger: ACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAGG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCTGGCTGCTATGAATaGCCTCCTGCTCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPGCYE*PPAQIC
Trigger: ACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGGAGCCCTTCTGCATaGGGAACATGGATGGGTCCA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGSPSA*GTWMGP
Trigger: TGGACCCATCCATGTTCCCAATGCAGAAGGGCTCCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCGTACTCAGCTGGTTaGTTTCCACTCTTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPYSAG*FPLLGA
Trigger: GGCTCCTAAGAGTGGAAACAAACCAGCTGAGTACGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATCAGGAGAGCCATaGTTGATGGAATCCAATGGT +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSSGEP*LMESNG
Trigger: ACCATTGGATTCCATCAACAATGGCTCTCCTGATGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTTTCAAAAAGCCACCTaGTTCCTCGCACATCTCCAT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLFQKAT*FLAHLH
Trigger: ATGGAGATGTGCGAGGAACAAGGTGGCTTTTTGAAA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCTTTACATTGCCACCTaGTATATGGTCAATACTGGG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLYIAT*YMVNTG
Trigger: CCCAGTATTGACCATATACAAGGTGGCAATGTAAAG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCAGTACAGTCCCTTTaGGAAAGTAGGTTCACCATT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSVQSL*ESRFTI
Trigger: AATGGTGAACCTACTTTCCAAAAGGGACTGTACTGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGATTTCCCCATAGTTaGACTGAGAGTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLRFPHS*TESICS
Trigger: GGAGCAGATACTCTCAGTCAAACTATGGGGAAATCT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCAGATTTCCCCATAGTTaGACTGAGAGTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSRFPHS*TESICS
Trigger: GGAGCAGATACTCTCAGTCAAACTATGGGGAAATCT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGTCCAGACACCCGTTTaGTCTCCTGATTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVVQTPV*SPDSKT
Trigger: TGTTTTGGAATCAGGAGACAAAACGGGTGTCTGGAC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGCAGTTCATATGTCTGTaGCTTTCCAACGGTTTTACC +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWQFICL*LSNGFT
Trigger: GGTAAAACCGTTGGAAAGCAACAGACATATGAACTG...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGAGATGTGCTGGCTTTaGAGATGGAGTTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFEMCWL*RWSWRR
Trigger: CCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGAGATGTGCTGGCTTTaGAGATGGAGTTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSEMCWL*RWSWRR
Trigger: CCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS TCA 90 bp GTGATTGTAGGTGGAGAGTCCCTACCACGAGTTTCTATCTTAATTTaGCGACGAAGTGTTGCAGGAGACATGATGATTTCAGACCTCTTC +
Preference number: 5 (lower is better)
Translates to: VIVGGESLPRVSILI*RRSVAGDMMISDLF
Trigger: GAAGAGGTCTGAAATCATCATGTCTCCTGCAACACTTCGTCGTCAAATTAAGATAGAAACTCGTGGTAGGGACTCTCCACCTACAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp GAGAAATGTTCACTTAGAGACCTGGTTTCAGAGCAGATCCTGGGCTaGTTAACAGGAATCTTTTCTCGCAGTTCTCTAGGATGTTTGCAA +
Preference number: 5 (lower is better)
Translates to: EKCSLRDLVSEQILG*LTGIFSRSSLGCLQ
Trigger: TTGCAAACATCCTAGAGAACTGCGAGAAAAGATTCCTGTTAAGCAGCCCAGGATCTGCTCTGAAACCAGGTCTCTAAGTGAACATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGTTGCCAGTTCAACTTaGGGGGAAAAATCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLVASST*GEKSFL
Trigger: TAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAAC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTGTTTCTGGCGATGTaGTGGAGAGTTGGTTATCAG +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLFLAM*WRVGYQ
Trigger: CTGATAACCAACTCTCCACAACATCGCCAGAAACAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACATGGTGGAGCCTCTaGGCAGCGACTGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTWWSL*AATVSG
Trigger: GCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTGGGGAAATTGGTTaGCTTTGGGGCAAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFGEIG*LWGKCN
Trigger: GTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTGCATCGATAACCTTTaGCTTGACGACCTTTGGTGC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFCIDNL*LDDLWC
Trigger: GCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGCA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTCAGCGGTCTGTATTaGTGTTTGCTGAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFSGLY*CLLKIL
Trigger: CAGAATTTTCAGCAAACACAAATACAGACCGCTGAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTCTCTTGTATGCCCTaGACTTCGAGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWFSCMP*TSRHFS
Trigger: AGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGCGACATGGGCCTTCTaGGTGGGGGTTCAACATAAC +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIATWAF*VGVQHN
Trigger: GTTATGTTGAACCCCCACCAAGAAGGCCCATGTCGC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGTGAATTTCAGATTTTaGCGACATGGGCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIVNFRF*RHGPSW
Trigger: CCAAGAAGGCCCATGTCGCAAAAATCTGAAATTCAC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAATTGGAACCGGGGTaGCTGCTGGACATGGGATGG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQLEPG*LLDMGW
Trigger: CCATCCCATGTCCAGCAGCAACCCCGGTTCCAATTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGAAATTTTCAGCCATTaGAACAGTTCGGTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFEIFSH*NSSVGR
Trigger: GCGGCCAACCGAACTGTTCAAATGGCTGAAAATTTC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAAGTCACAGCCAGATTaGCCAGCTTCTGAGCTATGT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFKSQPD*PASELC
Trigger: ACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACTT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGTATACATATTTCCTaGTCTTGGAGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSIHIS*SWSSSF
Trigger: GAAGCTGCTGCTCCAAGACAAGGAAATATGTATACT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCCACTAGGCACTCCATaGGATAAACTGTCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIPLGTP*DKLSFD
Trigger: GTCAAAAGACAGTTTATCCAATGGAGTGCCTAGTGG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCAGGGGATAGCAGGGTaGTCATTTCAGGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRQGIAG*SFQVAT
Trigger: AGTGGCCACCTGAAATGACAACCCTGCTATCCCCTG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTCACTCGGCCTATCTaGCACATTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFTRPI*HILPSF
Trigger: GAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTTTCCTGTTACTCTTaGTGTCTTCAGCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSFSCYS*CLQLHS
Trigger: CGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAAT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLVSSEP*LVHSSN
Trigger: ATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAAC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTGCGGGCAGCTTCTGTaGTTTCAACATGCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNCGQLL*FQHAKV
Trigger: AACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGCGGGCAGCTTCTGTaGTTTCAACATGCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSCGQLL*FQHAKV
Trigger: AACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTTCCTGGCTGCTTCTaGAAGTGCCAACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFPGCF*KCQPGC
Trigger: GCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTTCCTGGCTGCTTCTaGAAGTGCCAACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFPGCF*KCQPGC
Trigger: GCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTCCTGGCTGCTTCTaGAAGTGCCAACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFPGCF*KCQPGC
Trigger: GCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATCATCAGGAGAGCCATaGTTGATGGAATCCAATGGT +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVSSGEP*LMESNG
Trigger: ACCATTGGATTCCATCAACAATGGCTCTCCTGATGA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAAGTGTGTCGATGGGTaGGGTTTCAAACATCCATGT +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVKCVDG*GFKHPC
Trigger: ACATGGATGTTTGAAACCCAACCCATCGACACACTT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTGGCATACAGTGGTGTaGTCTCGAAGAGAGATTTAT +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSWHTVV*SRREIY
Trigger: ATAAATCTCTCTTCGAGACAACACCACTGTATGCCA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTACTGGTCAATGGGCCTaGTTTCAAAAAGCCACCTAC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFTGQWA*FQKATY
Trigger: GTAGGTGGCTTTTTGAAACAAGGCCCATTGACCAGT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGGAGGGATTTCTTCCTaGGTCATTTTTGTGATACCT +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSGGISS*VIFVIP
Trigger: AGGTATCACAAAAATGACCAAGGAAGAAATCCCTCC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATTCATGAAGTGGTGTaGTTTCAAAGAGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLIHEVV*FQRAMW
Trigger: CCACATGGCTCTTTGAAACAACACCACTTCATGAAT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCATTCATGAAGTGGTGTaGTTTCAAAGAGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSIHEVV*FQRAMW
Trigger: CCACATGGCTCTTTGAAACAACACCACTTCATGAAT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTCATTAGCTTGTATTTaGCCATTCGAACATCCCCTA +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSLACI*PFEHPL
Trigger: TAGGGGATGTTCGAATGGCAAAATACAAGCTAATGA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCTCAGTACAGTCCCTTTaGGAAAGTAGGTTCACCATT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSVQSL*ESRFTI
Trigger: AATGGTGAACCTACTTTCCAAAAGGGACTGTACTGA...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTGTCAGTGTTTCATTaGACTCTGTGTGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLSVFH*TLCGVV
Trigger: AACAACTCCACACAGAGTCAAATGAAACACTGACAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCATCTTTACAGTGCCTTaGGGGGCTTTTGGAAGATTA +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSIFTVP*GAFGRL
Trigger: TAATCTTCCAAAAGCCCCCAAAGGCACTGTAAAGAT...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGGTTTTACCAGCAGATaGGATGGAATTAAAGACATC +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWGFTSR*DGIKDI
Trigger: GATGTCTTTAATTCCATCCAATCTGCTGGTAAAACC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCAGTTCATATGTCTGTaGCTTTCCAACGGTTTTACC +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLQFICL*LSNGFT
Trigger: GGTAAAACCGTTGGAAAGCAACAGACATATGAACTG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCAGTTCATATGTCTGTaGCTTTCCAACGGTTTTACC +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSQFICL*LSNGFT
Trigger: GGTAAAACCGTTGGAAAGCAACAGACATATGAACTG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGGCAAAAGCTGCCACATaGGTTGAAGGTTTATATTCT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWAKAAT*VEGLYS
Trigger: AGAATATAAACCTTCAACCAATGTGGCAGCTTTTGC...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGTTATCTTTTATATGCTaGGGAAGTTTGGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWLSFIC*GSLGLG
Trigger: GCCCAAACCCAAACTTCCCAAGCATATAAAAGATAA...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp AACATCCATGTGGTATATTTCACATCACCACCAGCAATGATTTCTTaGTCAGCAATGCCCCTGGAAATATCACCTTCATCAGGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: NIHVVYFTSPPAMIS*SAMPLEISPSSGEP
Trigger: TGGCTCTCCTGATGAAGGTGATATTTCCAGGGGCATTGCTGATCAAGAAATCATTGCTGGTGGTGATGTGAAATATACCACATGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp AAATCCACTCTCAGGCTTATTAGGGCCAGCAGTCGAAATATAAGTTaGGGATTTGAGGCTGTTCTTGGGGGTCTTTGTCAATTTTGGATG +
Preference number: 5 (lower is better)
Translates to: KSTLRLIRASSRNIS*GFEAVLGGLCQFWM
Trigger: CATCCAAAATTGACAAAGACCCCCAAGAACAGCCTCAAATCCTCAACTTATATTTCGACTGCTGGCCCTAATAAGCCTGAGAGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS GCA 90 bp ACTTATAAATGCAGATTCCTCTTGGAAGGTGGTTCTCATCTCAGTTaGAGAAGCATCTGCGGTTGCATATCCCAGGCCTTTAAAAACTCT +
Preference number: 5 (lower is better)
Translates to: TYKCRFLLEGGSHLS*RSICGCISQAFKNS
Trigger: AGAGTTTTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCTGCAACTGAGATGAGAACCACCTTCCAAGAGGAATCTGCATTTATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp CCAGGGATGATGTCAGTTTCACTAACAGTACGTTCAACCAGAGACTaGCTTTTCTTCAGTAACAGTTTTGTACCTTCAACATCACCACCA +
Preference number: 5 (lower is better)
Translates to: PGMMSVSLTVRSTRD*LFFSNSFVPSTSPP
Trigger: TGGTGGTGATGTTGAAGGTACAAAACTGTTACTGAAGAAAAGGCAGTCTCTGGTTGAACGTACTGTTAGTGAAACTGACATCATCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp GCAATTTGCTTTCCTGAGGCTGGAAAATTGTACAATGGCTGTCCCTaGGATGACACTCACTTCTCTGATAATCACAAGATTCCCATTTCT +
Preference number: 5 (lower is better)
Translates to: AICFPEAGKLYNGCP*DDTHFSDNHKIPIS
Trigger: AGAAATGGGAATCTTGTGATTATCAGAGAAGTGAGTGTCATCCCAGGGACAGCCATTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CCA 90 bp GGAAATATCACCTTCATCAGGAGAGCCATTGTTGATGGAATCCAATaGTTGATTCTCAAAGATCCATCTAATGGACTGCACCTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: GNITFIRRAIVDGIQ*LILKDPSNGLHLSL
Trigger: AAGGGAGAGGTGCAGTCCATTAGATGGATCTTTGAGAATCAACCATTGGATTCCATCAACAATGGCTCTCCTGATGAAGGTGATATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp ATATCACCAGGGATGGCATCAGGCTGTTTAGATTCTTTCCATCGATaGCTTGATTCTTTAAGTGACTTGAGTGTGGCTAGCATGTTACCT +
Preference number: 5 (lower is better)
Translates to: ISPGMASGCLDSFHR*LDSLSDLSVASMLP
Trigger: AGGTAACATGCTAGCCACACTCAAGTCACTTAAAGAATCAAGCCATCGATGGAAAGAATCTAAACAGCCTGATGCCATCCCTGGTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp AACACATTGCAAGCTCATTTACCACTTATAAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCAGTTGCAGAAGCATCTGCGGTTGCA +
Preference number: 5 (lower is better)
Translates to: NTLQAHLPLINADSS*KVVLISVAEASAVA
Trigger: TGCAACCGCAGATGCTTCTGCAACTGAGATGAGAACCACCTTCCAAGAGGAATCTGCATTTATAAGTGGTAAATGAGCTTGCAATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672277.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATATCTGACAGGGAGGTaGCCAGTTCAACTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKYLTGR*PVQLWG
Trigger: CCCCCAAAGTTGAACTGGCAACCTCCCTGTCAGATA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTATCCGAGCATTACTTaGAGAGCCTGGGCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRYPSIT*RAWAGL
Trigger: CAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTATCCGAGCATTACTTaGAGAGCCTGGGCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIYPSIT*RAWAGL
Trigger: CAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATATCCGAGCATTACTTaGAGAGCCTGGGCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKYPSIT*RAWAGL
Trigger: CAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACGATGTTGTGGAGAGTaGGTTATCAGAACACACTCC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRCCGE*VIRTHS
Trigger: GGAGTGTGTTCTGATAACCAACTCTCCACAACATCG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTGTTTCTGGCGATGTaGTGGAGAGTTGGTTATCAG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLFLAM*WRVGYQ
Trigger: CTGATAACCAACTCTCCACAACATCGCCAGAAACAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTGTTTCTGGCGATGTaGTGGAGAGTTGGTTATCAG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLFLAM*WRVGYQ
Trigger: CTGATAACCAACTCTCCACAACATCGCCAGAAACAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCCTGGGAACCATCTaGAGCTTATCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFLGTI*SLSSWF
Trigger: GAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGCATCGATAACCTTTaGCTTGACGACCTTTGGTGC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSCIDNL*LDDLWC
Trigger: GCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGCA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCGGTCTGTATTTGTGTTaGCTGAAAATTCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSGLYLC*LKILSL
Trigger: CAGACTCAGAATTTTCAGCAAACACAAATACAGACC...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TGTTCTGACTGCACCTCCACTCTGGGAAACAAAGGCTTAGCTGTACATTCATGGAGTATTAGAGAAGACTaGTTTCTCTTGTATGCCCTT +
Preference number: 5 (lower is better)
Translates to: CSDCTSTLGNKGLAVHSWSIRED*FLLYAL
Trigger: AAGGGCATACAAGAGAAACAAGTCTTCTCTAATACT...CCATGAATGTACAGCTAAGCCTTTGTTTCCCAGAGTGGAGGTGCAGTCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCCCGGTTTTCCTGTTTaGGAGGACATCATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIPGFPV*EDIMAV
Trigger: GACAGCCATGATGTCCTCCAAAACAGGAAAACCGGG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACGTGACTACGAACAGTaGCTTCATGATGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSRDYEQ*LHDELL
Trigger: TAGCAGCTCATCATGAAGCAACTGTTCGTAGTCACG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGCGACATGGGCCTTCTaGGTGGGGGTTCAACATAAC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTATWAF*VGVQHN
Trigger: GTTATGTTGAACCCCCACCAAGAAGGCCCATGTCGC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCATGGGATGGCCCCTTaGGATAACTTTGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIHGMAP*DNFAVV
Trigger: CACCACTGCAAAGTTATCCAAAGGGGCCATCCCATG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATGGGATGGCCCCTTaGGATAACTTTGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHGMAP*DNFAVV
Trigger: CACCACTGCAAAGTTATCCAAAGGGGCCATCCCATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTACCTCTTCTCTACAATaGGAACCGGGGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQITSSLQ*EPGLLL
Trigger: CAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGGT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCAGTTTCTATCTTAATTaGACGACGAAGTGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLSFYLN*TTKCCR
Trigger: CCTGCAACACTTCGTCGTCAAATTAAGATAGAAACT...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGAAATTTTCAGCCATTaGAACAGTTCGGTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNEIFSH*NSSVGR
Trigger: GCGGCCAACCGAACTGTTCAAATGGCTGAAAATTTC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCTTCGACTCAACAATTaGACTCTCAAATGCATCCAT +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLRLNN*TLKCIH
Trigger: ATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCAGTATACATATTTCCTaGTCTTGGAGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISIHIS*SWSSSF
Trigger: GAAGCTGCTGCTCCAAGACAAGGAAATATGTATACT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCTTAGGGATCTCCTaGGAAGGAGGCCAAATGACT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFLGIS*EGGQMT
Trigger: AGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCTTAGGGATCTCCTaGGAAGGAGGCCAAATGACT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFLGIS*EGGQMT
Trigger: AGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAGGGGATAGCAGGGTaGTCATTTCAGGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQGIAG*SFQVAT
Trigger: AGTGGCCACCTGAAATGACAACCCTGCTATCCCCTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCACTCGGCCTATCTaGCACATTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFTRPI*HILPSF
Trigger: GAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCACTCGGCCTATCTaGCACATTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFTRPI*HILPSF
Trigger: GAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAAT +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIVSSEP*LVHSSN
Trigger: ATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAAC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAATTGTTTCTTCACCTaGGCCAAACCACCAGGCACT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNNCFFT*AKPPGT
Trigger: AGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCTGGCTGCTATGAATaGCCTCCTGCTCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPGCYE*PPAQIC
Trigger: ACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCTGGCTGCTATGAATaGCCTCCTGCTCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPGCYE*PPAQIC
Trigger: ACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTCCTGGCTGCTTCTaGAAGTGCCAACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFPGCF*KCQPGC
Trigger: GCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTCTGCTTGGCTGGGGTaGTCATCTCTTTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSAWLG*SSLCQN
Trigger: ATTCTGACAAAGAGATGACAACCCCAGCCAAGCAGA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCTGAGGCTGGAAAATaGTACAATGGCTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPEAGK*YNGCPW
Trigger: CCAGGGACAGCCATTGTACAATTTTCCAGCCTCAGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCTGAGGCTGGAAAATaGTACAATGGCTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPEAGK*YNGCPW
Trigger: CCAGGGACAGCCATTGTACAATTTTCCAGCCTCAGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATACTGTAGGGCAGACTaGTGGGATCCAAAGATTGAG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSYCRAD*WDPKIE
Trigger: CTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCGTACTCAGCTGGTTaGTTTCCACTCTTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPYSAG*FPLLGA
Trigger: GGCTCCTAAGAGTGGAAACAAACCAGCTGAGTACGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCAGTCTTAATCTGCTaGGCTGGGGTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSVLIC*AGVVIS
Trigger: AGAGATGACAACCCCAGCCAAGCAGATTAAGACTGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTCAGTCTTAATCTGCTaGGCTGGGGTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGSVLIC*AGVVIS
Trigger: AGAGATGACAACCCCAGCCAAGCAGATTAAGACTGA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGATGGAATCCAATGGTaGATTCTCAAAGATCCATCT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLDGIQW*ILKDPS
Trigger: AGATGGATCTTTGAGAATCAACCATTGGATTCCATC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCACCAGCAATGATTTCTaGATCAGCAATGCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFTSNDF*ISNAPG
Trigger: TCCAGGGGCATTGCTGATCAAGAAATCATTGCTGGT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTTCCCTTAATTTCTTaGAGCTCAGACCTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFPLIS*SSDLSC
Trigger: GCAGCTTAGGTCTGAGCTCAAAGAAATTAAGGGAAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTTCAAATAACCACTTaGCCTTACTCACCCCACCTT +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFQITT*PYSPHL
Trigger: AAGGTGGGGTGAGTAAGGCAAAGTGGTTATTTGAAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACTGGACTGTCTTTACTaGATGATATTTTCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLDCLY*MIFSKG
Trigger: CCCCTTGGAAAATATCATCAAGTAAAGACAGTCCAG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATACTGGTCAATGGGCCTaGTTTCAAAAAGCCACCTAC +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNTGQWA*FQKATY
Trigger: GTAGGTGGCTTTTTGAAACAAGGCCCATTGACCAGT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACATAAAGAGACTCCATaGGCTGGGTCTCAAAAAGCC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSHKETP*AGSQKA
Trigger: GGCTTTTTGAGACCCAGCCAATGGAGTCTCTTTATG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACTTTACATTGCCACCTaGTATATGGTCAATACTGGG +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLYIAT*YMVNTG
Trigger: CCCAGTATTGACCATATACAAGGTGGCAATGTAAAG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCTACTTGTCTTTACATaGCCACCTTGTATATGGTCA +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSLLVFT*PPCIWS
Trigger: TGACCATATACAAGGTGGCAATGTAAAGACAAGTAG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTACTTGTCTTTACATaGCCACCTTGTATATGGTCA +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLLVFT*PPCIWS
Trigger: TGACCATATACAAGGTGGCAATGTAAAGACAAGTAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGGAGGGATTTCTTCCTaGGTCATTTTTGTGATACCT +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIGGISS*VIFVIP
Trigger: AGGTATCACAAAAATGACCAAGGAAGAAATCCCTCC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCATTAGCTTGTATTTaGCCATTCGAACATCCCCTA +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSSLACI*PFEHPL
Trigger: TAGGGGATGTTCGAATGGCAAAATACAAGCTAATGA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCGCTTGGTTCATTAGCTaGTATTTTGCCATTCGAACA +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLAWFIS*YFAIRT
Trigger: TGTTCGAATGGCAAAATACAAGCTAATGAACCAAGC...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTCCTTCTTCACGCTCAATaGTGTCACCATCATTTTCAT +
Preference number: 5 (lower is better)
Translates to: QGCHFRWPLRFTHFELFLLLHAQ*CHHHFH
Trigger: ATGAAAATGATGGTGACACAATTGAGCGTGAAGAAG...GAGGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTACTGTCAGTGTTTCATTaGACTCTGTGTGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVLSVFH*TLCGVV
Trigger: AACAACTCCACACAGAGTCAAATGAAACACTGACAG...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCAAATGGACCTGGCTTaGGCTGAAGAAGACTATTTT +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIQMDLA*AEEDYF
Trigger: AAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGATTTCCCCATAGTTaGACTGAGAGTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFRFPHS*TESICS
Trigger: GGAGCAGATACTCTCAGTCAAACTATGGGGAAATCT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAATCTTTACAGTGCCTTaGGGGGCTTTTGGAAGATTA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVIFTVP*GAFGRL
Trigger: TAATCTTCCAAAAGCCCCCAAAGGCACTGTAAAGAT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGTCCAGACACCCGTTTaGTCTCCTGATTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNVQTPV*SPDSKT
Trigger: TGTTTTGGAATCAGGAGACAAAACGGGTGTCTGGAC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTACATTGGATGTGTCTaGCTCTACAGGCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFYIGCV*LYRQKL
Trigger: CAGCTTTTGCCTGTAGAGCAAGACACATCCAATGTA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGTCTCCCGCTTTTTGTaGGTTGCCTTAAATGTATTG +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIVSRFL*VALNVL
Trigger: CAATACATTTAAGGCAACCAACAAAAAGCGGGAGAC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTCAGTCTCCCGCTTTTaGTTGGTTGCCTTAAATGTA +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPISVSRF*LVALNV
Trigger: TACATTTAAGGCAACCAACAAAAAGCGGGAGACTGA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGAGATGTGCTGGCTTTaGAGATGGAGTTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIEMCWL*RWSWRR
Trigger: CCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCTTTTTGGGAATATTGTaGCATGAAGTCTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSFLGIL*HEVSTV
Trigger: CACAGTGGAGACTTCATGCAACAATATTCCCAAAAA...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp CTGTTTATTTCATTTTCAGGGTCATTCACGAAATTTTCAGCCATTTaGACAGTTCGGTTGGCCGCTTCATATCTCTGTGTGTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LFISFSGSFTKFSAI*TVRLAASYLCVCSD
Trigger: GTCAGAGCACACACAGAGATATGAAGCGGCCAACCGAACTGTTCAAATGGCTGAAAATTTCGTGAATGACCCTGAAAATGAAATAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp AAAAGCCACACAGCCTGCTTAACATCACCTTTCTGCACATCTTCCTaGGTGACTGTCTTGATATTTTCATATTCTAACCCTTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KSHTACLTSPFCTSS*VTVLIFSYSNPSPL
Trigger: GAGAGGAGAAGGGTTAGAATATGAAAATATCAAGACAGTCACTCAGGAAGATGTGCAGAAAGGTGATGTTAAGCAGGCTGTGTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp AGAGTCCCTACCACGAGTTTCTATCTTAATTTGACGACGAAGTGTTaGAGGAGACATGATGATTTCAGACCTCTTCTCTACAATTGGAAC +
Preference number: 5 (lower is better)
Translates to: RVPTTSFYLNLTTKC*RRHDDFRPLLYNWN
Trigger: GTTCCAATTGTAGAGAAGAGGTCTGAAATCATCATGTCTCCTGCAACACTTCGTCGTCAAATTAAGATAGAAACTCGTGGTAGGGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp AGGTTTTCATCTTCGACTCAACAATTTGACTCTCAAATGCATCCATaGCTGAGAAATGTTCACTTAGAGACCTGGTTTCAGAGCAGATCC +
Preference number: 5 (lower is better)
Translates to: RFSSSTQQFDSQMHP*LRNVHLETWFQSRS
Trigger: GGATCTGCTCTGAAACCAGGTCTCTAAGTGAACATTTCTCAGGCATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAGATGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp TTTAACTGTGGTCACTTCATGATAGGACCCTTCTCGGTCTTGAATTaGATAGAGTGGCTGGGTTTCAAAGAGCATTCTGTAGCTTTTTAC +
Preference number: 5 (lower is better)
Translates to: FNCGHFMIGPFSVLN*IEWLGFKEHSVAFY
Trigger: GTAAAAAGCTACAGAATGCTCTTTGAAACCCAGCCACTCTATGCAATTCAAGACCGAGAAGGGTCCTATCATGAAGTGACCACAGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATATCTGACAGGGAGGTaGCCAGTTCAACTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTYLTGR*PVQLWG
Trigger: CCCCCAAAGTTGAACTGGCAACCTCCCTGTCAGATA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATATCCGAGCATTACTTaGAGAGCCTGGGCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTYPSIT*RAWAGL
Trigger: CAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCATTTCGCAAGCTGATTaGGATTGCATAATGTCCCTT +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIISQAD*DCIMSL
Trigger: AAGGGACATTATGCAATCCAAATCAGCTTGCGAAAT...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGGAAATTGGTTTGCTTaGGGGCAAGTGCAACTGCTC +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIGNWFA*GQVQLL
Trigger: GAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGAAATTGGTTTGCTTaGGGGCAAGTGCAACTGCTC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGNWFA*GQVQLL
Trigger: GAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGGATTCTGTAGGCAATaGTACTGTCACTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFGFCRQ*YCHSFL
Trigger: GAGAAAAGAGTGACAGTACAATTGCCTACAGAATCC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTCGATAACCTTTTGCTaGACGACCTTTGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSITFC*TTFGAD
Trigger: ATCAGCACCAAAGGTCGTCAAGCAAAAGGTTATCGA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGGTCTGTATTTGTGTTaGCTGAAAATTCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIGLYLC*LKILSL
Trigger: CAGACTCAGAATTTTCAGCAAACACAAATACAGACC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGAAGACTTGTTTCTCTaGTATGCCCTTGACTTCGAG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSEDLFL*YALDFE
Trigger: CTCGAAGTCAAGGGCATACAAGAGAAACAAGTCTTC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACCCGGTTTTCCTGTTTaGGAGGACATCATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTPGFPV*EDIMAV
Trigger: GACAGCCATGATGTCCTCCAAAACAGGAAAACCGGG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTGAATTTCAGATTTTaGCGACATGGGCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVNFRF*RHGPSW
Trigger: CCAAGAAGGCCCATGTCGCAAAAATCTGAAATTCAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGTGAATTTCAGATTTTaGCGACATGGGCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNVNFRF*RHGPSW
Trigger: CCAAGAAGGCCCATGTCGCAAAAATCTGAAATTCAC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTGAGTCTGACAAGTaGTTCAGAGCGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFESDK*FRATPG
Trigger: CCCAGGAGTCGCTCTGAACAACTTGTCAGACTCAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTTCCTGATTTCCTCTaGAGCGTCCACAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFPDFL*SVHRFS
Trigger: AGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTCCTGATTTCCTCTaGAGCGTCCACAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFPDFL*SVHRFS
Trigger: AGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGAGGCACTGCAACCTaGCGGATGATTTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGGTAT*RMISTA
Trigger: TGCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTGGTGGGGCATGCTaGAAGTCACAGCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVGGAC*KSQPDL
Trigger: CAAATCTGGCTGTGACTTCAAGCATGCCCCACCAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCAAATGCAGATTCCTCTaGGAAGGTGGTTCTCATCTC +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGKCRFL*EGGSHL
Trigger: GAGATGAGAACCACCTTCCAAGAGGAATCTGCATTT...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAAATGCAGATTCCTCTaGGAAGGTGGTTCTCATCTC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSKCRFL*EGGSHL
Trigger: GAGATGAGAACCACCTTCCAAGAGGAATCTGCATTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGTATACATATTTCCTaGTCTTGGAGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSIHIS*SWSSSF
Trigger: GAAGCTGCTGCTCCAAGACAAGGAAATATGTATACT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCCACTAGGCACTCCATaGGATAAACTGTCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNPLGTP*DKLSFD
Trigger: GTCAAAAGACAGTTTATCCAATGGAGTGCCTAGTGG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCACTAGGCACTCCATaGGATAAACTGTCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPLGTP*DKLSFD
Trigger: GTCAAAAGACAGTTTATCCAATGGAGTGCCTAGTGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTGCGGGCAGCTTCTGTaGTTTCAACATGCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQICGQLL*FQHAKV
Trigger: AACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGCGGGCAGCTTCTGTaGTTTCAACATGCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKCGQLL*FQHAKV
Trigger: AACCTTGGCATGTTGAAACAACAGAAGCTGCCCGCA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCTGTGTTTTCATTATaGCGGGCAGCTTCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPVFSL*RAASVV
Trigger: AACAACAGAAGCTGCCCGCAATAATGAAAACACAGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCCTGTGTTTTCATTATaGCGGGCAGCTTCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGPVFSL*RAASVV
Trigger: AACAACAGAAGCTGCCCGCAATAATGAAAACACAGG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACCTGGCTGCTATGAATaGCCTCCTGCTCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTPGCYE*PPAQIC
Trigger: ACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAGG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATGAAACTGAGATGCTaGGTTTACTTCCTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSMKLRC*VYFLGV
Trigger: CACACCGAGGAAGTAAACCAAGCATCTCAGTTTCAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACCTGAGGCTGGAAAATaGTACAATGGCTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTPEAGK*YNGCPW
Trigger: CCAGGGACAGCCATTGTACAATTTTCCAGCCTCAGG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACCATATTCCCTGGTGTaGTTACTCTTGTCCACAGAA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSPYSLV*LLLSTE
Trigger: TTCTGTGGACAAGAGTAACAACACCAGGGAATATGG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTGGAATATACATCTTaGGGGACTGGTAGTCTTCTA +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILEYTS*GTGSLL
Trigger: TAGAAGACTACCAGTCCCCAAAGATGTATATTCCAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCATCAGGAGAGCCATaGTTGATGGAATCCAATGGT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSSGEP*LMESNG
Trigger: ACCATTGGATTCCATCAACAATGGCTCTCCTGATGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAAGTGTGTCGATGGGTaGGGTTTCAAACATCCATGT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSKCVDG*GFKHPC
Trigger: ACATGGATGTTTGAAACCCAACCCATCGACACACTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTACTCACCCCACCTTaGACATTTTCTTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLLTPP*TFSSMD
Trigger: ATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCCTTCACTTCTTCTCCTaGTATGCTGTCCAAATTTTC +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPILHFFS*YAVQIF
Trigger: GAAAATTTGGACAGCATACAAGGAGAAGAAGTGAAG...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATAGCCATGTGGTTGTTTaGACATCAGAAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSHVVV*TSEGGI
Trigger: AATCCCTCCTTCTGATGTCAAAACAACCACATGGCT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGCCATGTGGTTGTTTaGACATCAGAAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSHVVV*TSEGGI
Trigger: AATCCCTCCTTCTGATGTCAAAACAACCACATGGCT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCGCTTGGTTCATTAGCTaGTATTTTGCCATTCGAACA +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIAWFIS*YFAIRT
Trigger: TGTTCGAATGGCAAAATACAAGCTAATGAACCAAGC...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGTTTCCAGGTCATCTTaGAGAAGCTCCTTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFVSRSS*RSSFFR
Trigger: TCTGAAAAAGGAGCTTCTCAAAGATGACCTGGAAAC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTTTCTTCTACTAAATaGCCATGGCAAGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLSSTK*PWQDFP
Trigger: GGGGAAATCTTGCCATGGCAATTTAGTAGAAGAAAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AGCAGGGTTGTCATTTCAGGTGGCCACTTAGGTTTACTCATTTTGAGCTCTTCCCAGAGCATCATTGTTTaGTTCACGATCTATGACAAT +
Preference number: 5 (lower is better)
Translates to: SRVVISGGHLGLLILSSSQSIIV*FTIYDN
Trigger: ATTGTCATAGATCGTGAACAAAACAATGATGCTCTG...GGAAGAGCTCAAAATGAGTAAACCTAAGTGGCCACCTGAAATGACAACCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATCCATAGCACTTTTCCTGTTACTCTTTGTGTCTTCAGCTTCACTCGGCCTATCTTCTCCAGAGCATCATaGTTTTGTTCACGATCTATG +
Preference number: 5 (lower is better)
Translates to: IHSTFPVTLCVFSFTRPIFSRAS*FCSRSM
Trigger: CATAGATCGTGAACAAAACAATGATGCTCTGGAGAA...GATAGGCCGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAAGTGCTATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAGGTTTTACCAGCAGATaGGATGGAATTAAAGACATC +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVGFTSR*DGIKDI
Trigger: GATGTCTTTAATTCCATCCAATCTGCTGGTAAAACC...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCAAGGACCTTTCCATaGCCATTTTTAAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSRTFP*PFLSLW
Trigger: CCACAGGCTTAAAAATGGCAATGGAAAGGTCCTTGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTCAAGGACCTTTCCATaGCCATTTTTAAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSRTFP*PFLSLW
Trigger: CCACAGGCTTAAAAATGGCAATGGAAAGGTCCTTGA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp ACTTTCAGCGGTCTGTATTTGTGTTTGCTGAAAATTCTGAGTCTGTaGATCAAGATGTGCATCGATAACCTTTTGCTTGACGACCTTTGG +
Preference number: 5 (lower is better)
Translates to: TFSGLYLCLLKILSL*IKMCIDNLLLDDLW
Trigger: CCAAAGGTCGTCAAGCAAAAGGTTATCGATGCACATCTTGATTCACAGACTCAGAATTTTCAGCAAACACAAATACAGACCGCTGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp GACACAGTTGAAGTTAATTGTCTGCTCATATATTCATCTCTAAGATaGTGTTCTCCTGTAGTATCAGTCCAGACACCCGTTTTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: DTVEVNCLLIYSSLR*CSPVVSVQTPVLSP
Trigger: AGGAGACAAAACGGGTGTCTGGACTGATACTACAGGAGAACAGCATCTTAGAGATGAATATATGAGCAGACAATTAACTTCAACTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp CACAGATTCTCTGAAGGAACCACTAGCAGCATGATTTATATTTACTaGTATTGTGATTGTAGGTGGAGAGTCCCTACCACGAGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: HRFSEGTTSSMIYIY*YCDCRWRVPTTSFY
Trigger: ATAGAAACTCGTGGTAGGGACTCTCCACCTACAATCACAATACCAGTAAATATAAATCATGCTGCTAGTGGTTCCTTCAGAGAATCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTTGCCAGTTCAACTTaGGGGGAAAAATCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVASST*GEKSFL
Trigger: TAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCGATGTTGTGGAGAGTaGGTTATCAGAACACACTCC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRRCCGE*VIRTHS
Trigger: GGAGTGTGTTCTGATAACCAACTCTCCACAACATCG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTCTGTTGTGTTTGTaGGGTACTACATTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLLLCL*GTTFLV
Trigger: CACCAAGAATGTAGTACCCAACAAACACAACAGAAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTCTGTTGTGTTTGTaGGGTACTACATTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLLLCL*GTTFLV
Trigger: CACCAAGAATGTAGTACCCAACAAACACAACAGAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTTCTTCTGTTGTGTTaGTTGGGTACTACATTCTTG +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLLLLC*LGTTFL
Trigger: CAAGAATGTAGTACCCAACAAACACAACAGAAGAAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTTGGGGAAATTGGTTaGCTTTGGGGCAAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFGEIG*LWGKCN
Trigger: GTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTGGGGAAATTGGTTaGCTTTGGGGCAAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFGEIG*LWGKCN
Trigger: GTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTGGGGAAATTGGTTaGCTTTGGGGCAAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFGEIG*LWGKCN
Trigger: GTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTCCTGGGAACCATCTaGAGCTTATCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFLGTI*SLSSWF
Trigger: GAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTGCATCGATAACCTTTaGCTTGACGACCTTTGGTGC +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFICIDNL*LDDLWC
Trigger: GCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGCA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTCAGCGGTCTGTATTaGTGTTTGCTGAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFSGLY*CLLKIL
Trigger: CAGAATTTTCAGCAAACACAAATACAGACCGCTGAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACGTGACTACGAACAGTaGCTTCATGATGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKRDYEQ*LHDELL
Trigger: TAGCAGCTCATCATGAAGCAACTGTTCGTAGTCACG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGAGAAGGGGAAGTGTTaGCTCTGTGAATTTCAGATT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFEKGKC*LCEFQI
Trigger: AATCTGAAATTCACAGAGCAAACACTTCCCCTTCTC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATGAGAAGGGGAAGTGTTaGCTCTGTGAATTTCAGATT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNEKGKC*LCEFQI
Trigger: AATCTGAAATTCACAGAGCAAACACTTCCCCTTCTC...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAGTCACAGCCAGATTaGCCAGCTTCTGAGCTATGT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRKSQPD*PASELC
Trigger: ACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAACTCTTCCACTCTCTaGCCACGTCTTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFNSSTL*PRLLKI
Trigger: AATTTTCAAAAGACGTGGCAAGAGAGTGGAAGAGTT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGTATACATATTTCCTaGTCTTGGAGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSIHIS*SWSSSF
Trigger: GAAGCTGCTGCTCCAAGACAAGGAAATATGTATACT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCTTAGGGATCTCCTaGGAAGGAGGCCAAATGACT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFLGIS*EGGQMT
Trigger: AGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCACTCGGCCTATCTaGCACATTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFTRPI*HILPSF
Trigger: GAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTCACTCGGCCTATCTaGCACATTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFTRPI*HILPSF
Trigger: GAAGGAAGGAAGAATGTGCAAGATAGGCCGAGTGAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTTTCCTGTTACTCTTaGTGTCTTCAGCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFSCYS*CLQLHS
Trigger: CGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAAT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVSSEP*LVHSSN
Trigger: ATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAATTGTTTCTTCACCTaGGCCAAACCACCAGGCACT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNCFFT*AKPPGT
Trigger: AGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAATTGTTTCTTCACCTaGGCCAAACCACCAGGCACT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRNCFFT*AKPPGT
Trigger: AGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCTGCTTGGCTGGGGTaGTCATCTCTTTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSAWLG*SSLCQN
Trigger: ATTCTGACAAAGAGATGACAACCCCAGCCAAGCAGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCTGCTTGGCTGGGGTaGTCATCTCTTTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSAWLG*SSLCQN
Trigger: ATTCTGACAAAGAGATGACAACCCCAGCCAAGCAGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCTGCTTGGCTGGGGTaGTCATCTCTTTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISAWLG*SSLCQN
Trigger: ATTCTGACAAAGAGATGACAACCCCAGCCAAGCAGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGCTTCTTAATCTGCTaGGCTGGGGTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSFLIC*AGVVIS
Trigger: AGAGATGACAACCCCAGCCAAGCAGATTAAGAAGCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCAGTCTTAATCTGCTaGGCTGGGGTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSVLIC*AGVVIS
Trigger: AGAGATGACAACCCCAGCCAAGCAGATTAAGACTGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTAACAACTGATGATGGCTaGAAAGTCTCTTCATATTCA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVTTDDG*KVSSYS
Trigger: TGAATATGAAGAGACTTTCAAGCCATCATCAGTTGT...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCACCAGCAATGATTTCTaGATCAGCAATGCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFITSNDF*ISNAPG
Trigger: TCCAGGGGCATTGCTGATCAAGAAATCATTGCTGGT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGACCAGCAATGATTTCTaGATCAGCAATGCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRTSNDF*ISNAPG
Trigger: TCCAGGGGCATTGCTGATCAAGAAATCATTGCTGGT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTTCCCTTAATTTCTTaGAGCTCAGACCTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFPLIS*SSDLSC
Trigger: GCAGCTTAGGTCTGAGCTCAAAGAAATTAAGGGAAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTTTAATTTCCAGCATTaGGCCCGAACCATCTCTAAT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFFNFQH*ARTISN
Trigger: ATTAGAGATGGTTCGGGCCAAATGCTGGAAATTAAA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTACTCACCCCACCTTaGACATTTTCTTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLLTPP*TFSSMD
Trigger: ATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTACTCACCCCACCTTaGACATTTTCTTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLLTPP*TFSSMD
Trigger: ATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTGGCATACAGTGGTGTaGTCTCGAAGAGAGATTTAT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFWHTVV*SRREIY
Trigger: ATAAATCTCTCTTCGAGACAACACCACTGTATGCCA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATGGCATACAGTGGTGTaGTCTCGAAGAGAGATTTAT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSWHTVV*SRREIY
Trigger: ATAAATCTCTCTTCGAGACAACACCACTGTATGCCA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCTGGACTGTCTTTACTaGATGATATTTTCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLDCLY*MIFSKG
Trigger: CCCCTTGGAAAATATCATCAAGTAAAGACAGTCCAG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATAAAGAGACTCCATaGGCTGGGTCTCAAAAAGCC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHKETP*AGSQKA
Trigger: GGCTTTTTGAGACCCAGCCAATGGAGTCTCTTTATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTTACAGTTTGCAATTaGACTGCTGTTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFTVCN*TAVSES
Trigger: TGACTCTGAAACAGCAGTCAAATTGCAAACTGTAAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTCTCGGTCTTGAATaGCATAGAGTGGCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLLGLE*HRVAGF
Trigger: AAACCCAGCCACTCTATGCAATTCAAGACCGAGAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTTACATTGCCACCTaGTATATGGTCAATACTGGG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLYIAT*YMVNTG
Trigger: CCCAGTATTGACCATATACAAGGTGGCAATGTAAAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTTACATTGCCACCTaGTATATGGTCAATACTGGG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLYIAT*YMVNTG
Trigger: CCCAGTATTGACCATATACAAGGTGGCAATGTAAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGAGGGATTTCTTCCTaGGTCATTTTTGTGATACCT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGGISS*VIFVIP
Trigger: AGGTATCACAAAAATGACCAAGGAAGAAATCCCTCC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCATTAGCTTGTATTTaGCCATTCGAACATCCCCTA +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSLACI*PFEHPL
Trigger: TAGGGGATGTTCGAATGGCAAAATACAAGCTAATGA...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATCAGTACAGTCCCTTTaGGAAAGTAGGTTCACCATT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSVQSL*ESRFTI
Trigger: AATGGTGAACCTACTTTCCAAAAGGGACTGTACTGA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCAAATGGACCTGGCTTaGGCTGAAGAAGACTATTTT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNQMDLA*AEEDYF
Trigger: AAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTTCTTCTACTAAATaGCCATGGCAAGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLSSTK*PWQDFP
Trigger: GGGGAAATCTTGCCATGGCAATTTAGTAGAAGAAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAATCTTTACAGTGCCTTaGGGGGCTTTTGGAAGATTA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSIFTVP*GAFGRL
Trigger: TAATCTTCCAAAAGCCCCCAAAGGCACTGTAAAGAT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGTCCAGACACCCGTTTaGTCTCCTGATTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIVQTPV*SPDSKT
Trigger: TGTTTTGGAATCAGGAGACAAAACGGGTGTCTGGAC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAGTTCATATGTCTGTaGCTTTCCAACGGTTTTACC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQFICL*LSNGFT
Trigger: GGTAAAACCGTTGGAAAGCAACAGACATATGAACTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GTGCCTAAGTGTGGACTGTCAGTGGCCATAGATATTTTACTCAGTGTCACTGTATTCATTTCTGTTACATaGGATGTGTCTTGCTCTACA +
Preference number: 5 (lower is better)
Translates to: VPKCGLSVAIDILLSVTVFISVT*DVSCST
Trigger: TGTAGAGCAAGACACATCCAATGTAACAGAAATGAA...TACAGTGACACTGAGTAAAATATCTATGGCCACTGACAGTCCACACTTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGTCTCCCGCTTTTTGTaGGTTGCCTTAAATGTATTG +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGVSRFL*VALNVL
Trigger: CAATACATTTAAGGCAACCAACAAAAAGCGGGAGAC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTCAGTCTCCCGCTTTTaGTTGGTTGCCTTAAATGTA +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSVSRF*LVALNV
Trigger: TACATTTAAGGCAACCAACAAAAAGCGGGAGACTGA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS TCA 90 bp TCTGAGCTATGTGATGAAGAGGTTTTCATCTTCGACTCAACAATTTaGCTCTCAAATGCATCCATGCCTGAGAAATGTTCACTTAGAGAC +
Preference number: 5 (lower is better)
Translates to: SELCDEEVFIFDSTI*LSNASMPEKCSLRD
Trigger: GTCTCTAAGTGAACATTTCTCAGGCATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAGATGAAAACCTCTTCATCACATAGCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp GATTTCTTTCTCTCCTTCTTGTTTCTTAGCTGTCAGTGTTTCATTTaGCTCTGTGTGGAGTTGTTTCAGATAATCCAAAGCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DFFLSFLFLSCQCFI*LCVELFQIIQSSSF
Trigger: GAAGCTGGAGCTTTGGATTATCTGAAACAACTCCACACAGAGTCAAATGAAACACTGACAGCTAAGAAACAAGAAGGAGAGAAAGAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp ACTTTGAAATTTGGGGAAATTGGTTTGCTTTGGGGCAAGTGCAACTaGTCCAAATACTTCTTCTGTTGTGTTTGTTGGGTACTACATTCT +
Preference number: 5 (lower is better)
Translates to: TLKFGEIGLLWGKCN*SKYFFCCVCWVLHS
Trigger: AGAATGTAGTACCCAACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTCAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp ATCAAGTTTAATTTCCTGATGGGTTTTCACGTGACTACGAACAGTTaGTTCATGATGAGCTGCTACTTGGTGCTGTACTGTTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: IKFNFLMGFHVTTNS*FMMSCYLVLYCFLF
Trigger: AAAGAGAAAACAGTACAGCACCAAGTAGCAGCTCATCATGAAGCAACTGTTCGTAGTCACGTGAAAACCCATCAGGAAATTAAACTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp AAACCCTCCATTTTCTGGTGGTCATTTCTCAGTTCATATGTCTGTTaGTTTCCAACGGTTTTACCAGCAGATTGGATGGAATTAAAGACA +
Preference number: 5 (lower is better)
Translates to: KPSIFWWSFLSSYVC*FPTVLPADWMELKT
Trigger: TGTCTTTAATTCCATCCAATCTGCTGGTAAAACCGTTGGAAAGCAACAGACATATGAACTGAGAAATGACCACCAGAAAATGGAGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp ACCACTAGCAGCATGATTTATATTTACTGGTATTGTGATTGTAGGTaGAGAGTCCCTACCACGAGTTTCTATCTTAATTTGACGACGAAG +
Preference number: 5 (lower is better)
Translates to: TTSSMIYIYWYCDCR*RVPTTSFYLNLTTK
Trigger: CTTCGTCGTCAAATTAAGATAGAAACTCGTGGTAGGGACTCTCCACCTACAATCACAATACCAGTAAATATAAATCATGCTGCTAGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCACCTCTGTTATGTGTaGATTTTGGCTTTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFHLCYV*ILALSF
Trigger: AAAACTCAAAGCCAAAATCAACACATAACAGAGGTG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATATTTCGCAAGCTGATTaGGATTGCATAATGTCCCTT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNISQAD*DCIMSL
Trigger: AAGGGACATTATGCAATCCAAATCAGCTTGCGAAAT...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCTTCTTCTGTTGTGTTaGTTGGGTACTACATTCTTG +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNLLLLC*LGTTFL
Trigger: CAAGAATGTAGTACCCAACAAACACAACAGAAGAAG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTCTTCTGTTGTGTTaGTTGGGTACTACATTCTTG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLLLLC*LGTTFL
Trigger: CAAGAATGTAGTACCCAACAAACACAACAGAAGAAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTCTTCTGTTGTGTTaGTTGGGTACTACATTCTTG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLLLLC*LGTTFL
Trigger: CAAGAATGTAGTACCCAACAAACACAACAGAAGAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCCTGGGAACCATCTaGAGCTTATCTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFLGTI*SLSSWF
Trigger: GAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCGATAACCTTTTGCTaGACGACCTTTGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISITFC*TTFGAD
Trigger: ATCAGCACCAAAGGTCGTCAAGCAAAAGGTTATCGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTCGATAACCTTTTGCTaGACGACCTTTGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFISITFC*TTFGAD
Trigger: ATCAGCACCAAAGGTCGTCAAGCAAAAGGTTATCGA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCGATAACCTTTTGCTaGACGACCTTTGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSITFC*TTFGAD
Trigger: ATCAGCACCAAAGGTCGTCAAGCAAAAGGTTATCGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATGCATCGATAACCTTTaGCTTGACGACCTTTGGTGC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTCIDNL*LDDLWC
Trigger: GCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGCA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGGTCTGTATTTGTGTTaGCTGAAAATTCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSGLYLC*LKILSL
Trigger: CAGACTCAGAATTTTCAGCAAACACAAATACAGACC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCAGCGGTCTGTATTaGTGTTTGCTGAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFSGLY*CLLKIL
Trigger: CAGAATTTTCAGCAAACACAAATACAGACCGCTGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTCTCTTGTATGCCCTaGACTTCGAGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFSCMP*TSRHFS
Trigger: AGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTCTCTTGTATGCCCTaGACTTCGAGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSFSCMP*TSRHFS
Trigger: AGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGAAGACTTGTTTCTCTaGTATGCCCTTGACTTCGAG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKEDLFL*YALDFE
Trigger: CTCGAAGTCAAGGGCATACAAGAGAAACAAGTCTTC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGAAGACTTGTTTCTCTaGTATGCCCTTGACTTCGAG +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIEDLFL*YALDFE
Trigger: CTCGAAGTCAAGGGCATACAAGAGAAACAAGTCTTC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGTATTAGAGAAGACTaGTTTCTCTTGTATGCCCTT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSIRED*FLLYAL
Trigger: AAGGGCATACAAGAGAAACAAGTCTTCTCTAATACT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACGTGACTACGAACAGTaGCTTCATGATGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTRDYEQ*LHDELL
Trigger: TAGCAGCTCATCATGAAGCAACTGTTCGTAGTCACG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGAGGGAGGAGGAATGTaGCTATCATCAAGTTTAATT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFEGGGM*LSSSLI
Trigger: AATTAAACTTGATGATAGCAACATTCCTCCTCCCTC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTGAATTTCAGATTTTaGCGACATGGGCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVNFRF*RHGPSW
Trigger: CCAAGAAGGCCCATGTCGCAAAAATCTGAAATTCAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTTCCTGATTTCCTCTaGAGCGTCCACAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFPDFL*SVHRFS
Trigger: AGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTTCCTGATTTCCTCTaGAGCGTCCACAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFPDFL*SVHRFS
Trigger: AGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGAAATTTTCAGCCATTaGAACAGTTCGGTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTEIFSH*NSSVGR
Trigger: GCGGCCAACCGAACTGTTCAAATGGCTGAAAATTTC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCTTCGACTCAACAATTaGACTCTCAAATGCATCCAT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLRLNN*TLKCIH
Trigger: ATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCTTCGACTCAACAATTaGACTCTCAAATGCATCCAT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNLRLNN*TLKCIH
Trigger: ATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTCGACTCAACAATTaGACTCTCAAATGCATCCAT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLRLNN*TLKCIH
Trigger: ATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAAGTCACAGCCAGATTaGCCAGCTTCTGAGCTATGT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTKSQPD*PASELC
Trigger: ACATAGCTCAGAAGCTGGCAAATCTGGCTGTGACTT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAACTCTTCCACTCTCTaGCCACGTCTTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSNSSTL*PRLLKI
Trigger: AATTTTCAAAAGACGTGGCAAGAGAGTGGAAGAGTT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGCAGATTCCTCTaGGAAGGTGGTTCTCATCTC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRKCRFL*EGGSHL
Trigger: GAGATGAGAACCACCTTCCAAGAGGAATCTGCATTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAAATGCAGATTCCTCTaGGAAGGTGGTTCTCATCTC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKKCRFL*EGGSHL
Trigger: GAGATGAGAACCACCTTCCAAGAGGAATCTGCATTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCACTAGGCACTCCATaGGATAAACTGTCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPLGTP*DKLSFD
Trigger: GTCAAAAGACAGTTTATCCAATGGAGTGCCTAGTGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCACTAGGCACTCCATaGGATAAACTGTCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPLGTP*DKLSFD
Trigger: GTCAAAAGACAGTTTATCCAATGGAGTGCCTAGTGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCTTAGGGATCTCCTaGGAAGGAGGCCAAATGACT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFLGIS*EGGQMT
Trigger: AGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCTGTGTTTTCATTATaGCGGGCAGCTTCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPVFSL*RAASVV
Trigger: AACAACAGAAGCTGCCCGCAATAATGAAAACACAGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAATTGTTTCTTCACCTaGGCCAAACCACCAGGCACT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTNCFFT*AKPPGT
Trigger: AGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATGAAACTGAGATGCTaGGTTTACTTCCTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKMKLRC*VYFLGV
Trigger: CACACCGAGGAAGTAAACCAAGCATCTCAGTTTCAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATGAAACTGAGATGCTaGGTTTACTTCCTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRMKLRC*VYFLGV
Trigger: CACACCGAGGAAGTAAACCAAGCATCTCAGTTTCAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCTGCTTGGCTGGGGTaGTCATCTCTTTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSAWLG*SSLCQN
Trigger: ATTCTGACAAAGAGATGACAACCCCAGCCAAGCAGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGCTTCTTAATCTGCTaGGCTGGGGTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSFLIC*AGVVIS
Trigger: AGAGATGACAACCCCAGCCAAGCAGATTAAGAAGCT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409605.1
ENST00000409728.5
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATACTGTAGGGCAGACTaGTGGGATCCAAAGATTGAG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTYCRAD*WDPKIE
Trigger: CTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCCATATTCCCTGGTGTaGTTACTCTTGTCCACAGAA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRPYSLV*LLLSTE
Trigger: TTCTGTGGACAAGAGTAACAACACCAGGGAATATGG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACCATATTCCCTGGTGTaGTTACTCTTGTCCACAGAA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKPYSLV*LLLSTE
Trigger: TTCTGTGGACAAGAGTAACAACACCAGGGAATATGG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGTTTCCTTGCCTTTCTaGTCTGAATCTTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSVSLPF*SESFTE
Trigger: TTCTGTGAAAGATTCAGACAAGAAAGGCAAGGAAAC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGTTTCCTTGCCTTTCTaGTCTGAATCTTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFVSLPF*SESFTE
Trigger: TTCTGTGAAAGATTCAGACAAGAAAGGCAAGGAAAC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTTCAGGTGACATCTaGTCAAAAGATGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLSGDI*SKDVSL
Trigger: CAAGGAAACATCTTTTGACAAGATGTCACCTGAAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTTTCAGGTGACATCTaGTCAAAAGATGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLSGDI*SKDVSL
Trigger: CAAGGAAACATCTTTTGACAAGATGTCACCTGAAAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCTTTCAGGTGACATCTaGTCAAAAGATGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLSGDI*SKDVSL
Trigger: CAAGGAAACATCTTTTGACAAGATGTCACCTGAAAG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409195.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTGGAATATACATCTTaGGGGACTGGTAGTCTTCTA +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLEYTS*GTGSLL
Trigger: TAGAAGACTACCAGTCCCCAAAGATGTATATTCCAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGATGGAATCCAATGGTaGATTCTCAAAGATCCATCT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGDGIQW*ILKDPS
Trigger: AGATGGATCTTTGAGAATCAACCATTGGATTCCATC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGATGGAATCCAATGGTaGATTCTCAAAGATCCATCT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSDGIQW*ILKDPS
Trigger: AGATGGATCTTTGAGAATCAACCATTGGATTCCATC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTTAATTTCCAGCATTaGGCCCGAACCATCTCTAAT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFNFQH*ARTISN
Trigger: ATTAGAGATGGTTCGGGCCAAATGCTGGAAATTAAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTCTTACGATTTCTTCTaGCTGGACTGTCTTTACTTG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSYDFF*LDCLYL
Trigger: CAAGTAAAGACAGTCCAGCAAGAAGAAATCGTAAGA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACTGGTCAATGGGCCTaGTTTCAAAAAGCCACCTAC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTGQWA*FQKATY
Trigger: GTAGGTGGCTTTTTGAAACAAGGCCCATTGACCAGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTGTTTCAAACAACCATTaGGCAGATTTCACATTTCCA +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFVSNNH*ADFTFP
Trigger: TGGAAATGTGAAATCTGCCAAATGGTTGTTTGAAAC...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTAGCCATTTACAGGTTTaGACATCCCCTTTAACAATA +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFSHLQV*TSPLTI
Trigger: TATTGTTAAAGGGGATGTCAAAACCTGTAAATGGCT...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCTCCTGTTTTACAGTTaGCAATTTGACTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGLLFYS*QFDCCF
Trigger: GAAACAGCAGTCAAATTGCAAACTGTAAAACAGGAG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCTCCTGTTTTACAGTTaGCAATTTGACTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFLLFYS*QFDCCF
Trigger: GAAACAGCAGTCAAATTGCAAACTGTAAAACAGGAG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACTTCACTTCTTCTCCTaGTATGCTGTCCAAATTTTC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLHFFS*YAVQIF
Trigger: GAAAATTTGGACAGCATACAAGGAGAAGAAGTGAAG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTCTCGGTCTTGAATaGCATAGAGTGGCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLLGLE*HRVAGF
Trigger: AAACCCAGCCACTCTATGCAATTCAAGACCGAGAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCAAAGAATTGTCTACTaGTCTTTACATTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFQRIVY*SLHCHL
Trigger: AAGGTGGCAATGTAAAGACAAGTAGACAATTCTTTG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAGCCATGTGGTTGTTTaGACATCAGAAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISHVVV*TSEGGI
Trigger: AATCCCTCCTTCTGATGTCAAAACAACCACATGGCT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGCTTGGTTCATTAGCTaGTATTTTGCCATTCGAACA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSAWFIS*YFAIRT
Trigger: TGTTCGAATGGCAAAATACAAGCTAATGAACCAAGC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTTCTTTCTCTCCTTCTaGTTTCTTAGCTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNFFLSF*FLSCQC
Trigger: ACACTGACAGCTAAGAAACAAGAAGGAGAGAAAGAA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCTTTCTCTCCTTCTaGTTTCTTAGCTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFFLSF*FLSCQC
Trigger: ACACTGACAGCTAAGAAACAAGAAGGAGAGAAAGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATTCTTCAGTAACAGTTTaGTACCTTCAACATCACCAC +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNSSVTV*YLQHHH
Trigger: GTGGTGATGTTGAAGGTACAAAACTGTTACTGAAGA...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGATTCTTTAAGTGACTaGAGTGTGGCTAGCATGTTA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSDSLSD*SVASML
Trigger: TAACATGCTAGCCACACTCAAGTCACTTAAAGAATC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp GGAAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTCTCTTTGAAACTTCTTaGTGCTTCTTTCAAAGACCT +
Preference number: 5 (lower is better)
Translates to: GNKGLAVHSWLRASKPVFLFETS*CFFQRP
Trigger: AGGTCTTTGAAAGAAGCACAAAGAAGTTTCAAAGAG...AAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGATTTCCCCATAGTTaGACTGAGAGTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKRFPHS*TESICS
Trigger: GGAGCAGATACTCTCAGTCAAACTATGGGGAAATCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCTCCAGAGCATCATaGTTTTGTTCACGATCTATG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFSRAS*FCSRSM
Trigger: CATAGATCGTGAACAAAACAATGATGCTCTGGAGAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCTCCAGAGCATCATaGTTTTGTTCACGATCTATG +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFSRAS*FCSRSM
Trigger: CATAGATCGTGAACAAAACAATGATGCTCTGGAGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTCCAGACACCCGTTTaGTCTCCTGATTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVQTPV*SPDSKT
Trigger: TGTTTTGGAATCAGGAGACAAAACGGGTGTCTGGAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCGGTTTTACCAGCAGATaGGATGGAATTAAAGACATC +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGGFTSR*DGIKDI
Trigger: GATGTCTTTAATTCCATCCAATCTGCTGGTAAAACC...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATACATTGGATGTGTCTaGCTCTACAGGCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKYIGCV*LYRQKL
Trigger: CAGCTTTTGCCTGTAGAGCAAGACACATCCAATGTA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTACATTGGATGTGTCTaGCTCTACAGGCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRYIGCV*LYRQKL
Trigger: CAGCTTTTGCCTGTAGAGCAAGACACATCCAATGTA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCAAGGACCTTTCCATaGCCATTTTTAAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSRTFP*PFLSLW
Trigger: CCACAGGCTTAAAAATGGCAATGGAAAGGTCCTTGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCTCAGGGTTAAAGTaGATTGGATTCAAGGACCTT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFSGLK*IGFKDL
Trigger: AAGGTCCTTGAATCCAATCAACTTTAACCCTGAGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCTCAGGGTTAAAGTaGATTGGATTCAAGGACCTT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFSGLK*IGFKDL
Trigger: AAGGTCCTTGAATCCAATCAACTTTAACCCTGAGAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTTTTGGGAATATTGTaGCATGAAGTCTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFLGIL*HEVSTV
Trigger: CACAGTGGAGACTTCATGCAACAATATTCCCAAAAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGTTCGAGGCTTCTTTTaGGGAATATTGTTGCATGAA +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFVRGFF*GILLHE
Trigger: TTCATGCAACAATATTCCCAAAAAGAAGCCTCGAAC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCATTATCTTTTATATGCTaGGGAAGTTTGGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSLSFIC*GSLGLG
Trigger: GCCCAAACCCAAACTTCCCAAGCATATAAAAGATAA...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATGTTCTTGGGGGTCTTaGTCAATTTTGGATGCAGGT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKCSWGS*SILDAG
Trigger: ACCTGCATCCAAAATTGACAAAGACCCCCAAGAACA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CCA 90 bp CTCAAGAATTCCACTATATTTAAGGCACCTTTTCCATCATCCCGCTaGGATTCTTTCACAGAGGAAAAGAAAGATTTGTTCTGTGTAATC +
Preference number: 5 (lower is better)
Translates to: LKNSTIFKAPFPSSR*DSFTEEKKDLFCVI
Trigger: GATTACACAGAACAAATCTTTCTTTTCCTCTGTGAAAGAATCCCAGCGGGATGATGGAAAAGGTGCCTTAAATATAGTGGAATTCTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp TGTAGAGAATCTGCATCAGGAACTTCTTTTAGAATGTCTAATGGCTaGGTTTCAAACATCCAACACTTTCTGGAGACATCTGTACCTATT +
Preference number: 5 (lower is better)
Translates to: CRESASGTSFRMSNG*VSNIQHFLETSVPI
Trigger: AATAGGTACAGATGTCTCCAGAAAGTGTTGGATGTTTGAAACCCAGCCATTAGACATTCTAAAAGAAGTTCCTGATGCAGATTCTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp GCTGGACTGTCTTTACTTGATGATATTTTCCAAGGGGATCTTGAATaGCATACAGTGGTGTTGTCTCGAAGAGAGATTTATTTAACTCTA +
Preference number: 5 (lower is better)
Translates to: AGLSLLDDIFQGDLE*HTVVLSRREIYLTL
Trigger: TAGAGTTAAATAAATCTCTCTTCGAGACAACACCACTGTATGCCATTCAAGATCCCCTTGGAAAATATCATCAAGTAAAGACAGTCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGTTGCCAGTTCAACTTaGGGGGAAAAATCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIVASST*GEKSFL
Trigger: TAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAAC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTTGCCAGTTCAACTTaGGGGGAAAAATCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVASST*GEKSFL
Trigger: TAAGAACGATTTTTCCCCCAAAGTTGAACTGGCAAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCACCTCTGTTATGTGTaGATTTTGGCTTTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGHLCYV*ILALSF
Trigger: AAAACTCAAAGCCAAAATCAACACATAACAGAGGTG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCCACCTCTGTTATGTGTaGATTTTGGCTTTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFHLCYV*ILALSF
Trigger: AAAACTCAAAGCCAAAATCAACACATAACAGAGGTG...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACACCTCTGTTATGTGTaGATTTTGGCTTTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSHLCYV*ILALSF
Trigger: AAAACTCAAAGCCAAAATCAACACATAACAGAGGTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAAATACTTCTTCTGTaGTGTTTGTTGGGTACTACA +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQILLL*CLLGTT
Trigger: TGTAGTACCCAACAAACACAACAGAAGAAGTATTTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAGGGTAAGGTTTTCTTAGGGATCTCCTTGGAAGGAGGCCAAATGACTTTTAATCAAATACTTCTTCTGTaGTGTTTGTTGGGTACTACA +
Preference number: 5 (lower is better)
Translates to: KGKVFLGISLEGGQMTFNQILLL*CLLGTT
Trigger: TGTAGTACCCAACAAACACAACAGAAGAAGTATTTG...ATTAAAAGTCATTTGGCCTCCTTCCAAGGAGATCCCTAAGAAAACCTTACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGATTCTGTAGGCAATaGTACTGTCACTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGFCRQ*YCHSFL
Trigger: GAGAAAAGAGTGACAGTACAATTGCCTACAGAATCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAGTATTAGAGAAGACTaGTTTCTCTTGTATGCCCTT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSSIRED*FLLYAL
Trigger: AAGGGCATACAAGAGAAACAAGTCTTCTCTAATACT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGAGAAGGGGAAGTGTTaGCTCTGTGAATTTCAGATT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYREKGKC*LCEFQI
Trigger: AATCTGAAATTCACAGAGCAAACACTTCCCCTTCTC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGTATACATATTTCCTaGTCTTGGAGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSIHIS*SWSSSF
Trigger: GAAGCTGCTGCTCCAAGACAAGGAAATATGTATACT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGTATACATATTTCCTaGTCTTGGAGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSIHIS*SWSSSF
Trigger: GAAGCTGCTGCTCCAAGACAAGGAAATATGTATACT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTTTCCTGTTACTCTTaGTGTCTTCAGCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFSCYS*CLQLHS
Trigger: CGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTTCCTGTTACTCTTaGTGTCTTCAGCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFSCYS*CLQLHS
Trigger: CGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACATTTGCAGTGTCATTaGCTTCACTCGACAAGGGTA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTHLQCH*LHSTRV
Trigger: TACCCTTGTCGAGTGAAGCAAATGACACTGCAAATG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAAT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVSSEP*LVHSSN
Trigger: ATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAAT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVSSEP*LVHSSN
Trigger: ATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCATCAGGAGAGCCATaGTTGATGGAATCCAATGGT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSSGEP*LMESNG
Trigger: ACCATTGGATTCCATCAACAATGGCTCTCCTGATGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCGATGCATTTTATTCATaGAGTCCAATGGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFDAFYS*SPMALF
Trigger: AAACAAGGCCATTGGACTCAATGAATAAAATGCATC...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAGATGCATTTTATTCATaGAGTCCAATGGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSDAFYS*SPMALF
Trigger: AAACAAGGCCATTGGACTCAATGAATAAAATGCATC...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTCCCTTAATTTCTTaGAGCTCAGACCTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFPLIS*SSDLSC
Trigger: GCAGCTTAGGTCTGAGCTCAAAGAAATTAAGGGAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTACTCACCCCACCTTaGACATTTTCTTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLLTPP*TFSSMD
Trigger: ATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTTCAAATAACCACTTaGCCTTACTCACCCCACCTT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFQITT*PYSPHL
Trigger: AAGGTGGGGTGAGTAAGGCAAAGTGGTTATTTGAAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCAAATGTCTTCCAGAGGTaGGGTTTCAAAAATCCATTT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSNVFQR*GFKNPF
Trigger: AAATGGATTTTTGAAACCCAACCTCTGGAAGACATT...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAATGTCTTCCAGAGGTaGGGTTTCAAAAATCCATTT +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFNVFQR*GFKNPF
Trigger: AAATGGATTTTTGAAACCCAACCTCTGGAAGACATT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTGGCATACAGTGGTGTaGTCTCGAAGAGAGATTTAT +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIWHTVV*SRREIY
Trigger: ATAAATCTCTCTTCGAGACAACACCACTGTATGCCA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTGGACTGTCTTTACTaGATGATATTTTCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLDCLY*MIFSKG
Trigger: CCCCTTGGAAAATATCATCAAGTAAAGACAGTCCAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCAGCCATTTACAGGTTTaGACATCCCCTTTAACAATA +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFSHLQV*TSPLTI
Trigger: TATTGTTAAAGGGGATGTCAAAACCTGTAAATGGCT...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTCAAAAAGCCACCTaGTTCCTCGCACATCTCCAT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFQKAT*FLAHLH
Trigger: ATGGAGATGTGCGAGGAACAAGGTGGCTTTTTGAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp CCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCAAGTTCCTCACAAAGAATTGTCTACTaGTCTTTACATTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: PIEIDTRFLNTMFTSSSSQRIVY*SLHCHL
Trigger: AAGGTGGCAATGTAAAGACAAGTAGACAATTCTTTG...TGAGGAACTTGATGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGGAGGGATTTCTTCCTaGGTCATTTTTGTGATACCT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRGGISS*VIFVIP
Trigger: AGGTATCACAAAAATGACCAAGGAAGAAATCCCTCC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATTCATGAAGTGGTGTaGTTTCAAAGAGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKIHEVV*FQRAMW
Trigger: CCACATGGCTCTTTGAAACAACACCACTTCATGAAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCAGTACAGTCCCTTTaGGAAAGTAGGTTCACCATT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISVQSL*ESRFTI
Trigger: AATGGTGAACCTACTTTCCAAAAGGGACTGTACTGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCTGTCAGTGTTTCATTaGACTCTGTGTGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILSVFH*TLCGVV
Trigger: AACAACTCCACACAGAGTCAAATGAAACACTGACAG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTGTCAGTGTTTCATTaGACTCTGTGTGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLSVFH*TLCGVV
Trigger: AACAACTCCACACAGAGTCAAATGAAACACTGACAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTTTCCAGGTCATCTTaGAGAAGCTCCTTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVSRSS*RSSFFR
Trigger: TCTGAAAAAGGAGCTTCTCAAAGATGACCTGGAAAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTTCTTCTACTAAATaGCCATGGCAAGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLSSTK*PWQDFP
Trigger: GGGGAAATCTTGCCATGGCAATTTAGTAGAAGAAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATCTTTACAGTGCCTTaGGGGGCTTTTGGAAGATTA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKIFTVP*GAFGRL
Trigger: TAATCTTCCAAAAGCCCCCAAAGGCACTGTAAAGAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCCAGAGCATCATTGTTTaGTTCACGATCTATGACAAT +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGQSIIV*FTIYDN
Trigger: ATTGTCATAGATCGTGAACAAAACAATGATGCTCTG...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATACATTGGATGTGTCTaGCTCTACAGGCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTYIGCV*LYRQKL
Trigger: CAGCTTTTGCCTGTAGAGCAAGACACATCCAATGTA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp AAACAAAGGCTTAGCTGTACATTCATGGCTCAGAGCATCAAAACCTGTGTTTTCTTCATTTCTGTTACATaGGATGTGTCTTGCTCTACA +
Preference number: 5 (lower is better)
Translates to: KQRLSCTFMAQSIKTCVFFISVT*DVSCST
Trigger: TGTAGAGCAAGACACATCCAATGTAACAGAAATGAA...GAAAACACAGGTTTTGATGCTCTGAGCCATGAATGTACAGCTAAGCCTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCAACATGCCAAGGTTTAACATCCTTTCCAAATTCCCTTAAATCCAAGCATGGCTTCATTTCTGTTACATaGGATGTGTCTTGCTCTACA +
Preference number: 5 (lower is better)
Translates to: STCQGLTSFPNSLKSKHGFISVT*DVSCST
Trigger: TGTAGAGCAAGACACATCCAATGTAACAGAAATGAA...GCCATGCTTGGATTTAAGGGAATTTGGAAAGGATGTTAAACCTTGGCATGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTCTCCCGCTTTTTGTaGGTTGCCTTAAATGTATTG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVSRFL*VALNVL
Trigger: CAATACATTTAAGGCAACCAACAAAAAGCGGGAGAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCAGTCTCCCGCTTTTaGTTGGTTGCCTTAAATGTA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSVSRF*LVALNV
Trigger: TACATTTAAGGCAACCAACAAAAAGCGGGAGACTGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCAGTCTCCCGCTTTTaGTTGGTTGCCTTAAATGTA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSVSRF*LVALNV
Trigger: TACATTTAAGGCAACCAACAAAAAGCGGGAGACTGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGATTTGAGGCTGTTCTaGGGGGTCTTTGTCAATTTT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKDLRLF*GVFVNF
Trigger: AAAATTGACAAAGACCCCCAAGAACAGCCTCAAATC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS TCA 90 bp TTATGGTATCAAGTGGCTGAGTTTCAAAGAGCCAAGTACAAGTTTTaGCATCTCCCTTATGAATTTCTTCACTGCTGGTCATTAACGAAA +
Preference number: 5 (lower is better)
Translates to: LWYQVAEFQRAKYKF*HLPYEFLHCWSLTK
Trigger: TTTCGTTAATGACCAGCAGTGAAGAAATTCATAAGGGAGATGTCAAAACTTGTACTTGGCTCTTTGAAACTCAGCCACTTGATACCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp TCACCTTTTATAATCTCTTCTTTGGGTATCTTACCAAATGTACTCTaGGGCTCGGTCATAAAAACCTTAACTGTGTTATGCACATCTCCA +
Preference number: 5 (lower is better)
Translates to: SPFIISSLGILPNVL*GSVIKTLTVLCTSP
Trigger: TGGAGATGTGCATAACACAGTTAAGGTTTTTATGACCGAGCCTCAGAGTACATTTGGTAAGATACCCAAAGAAGAGATTATAAAAGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 90 bp AGTTTGATGGTTTTAACTTTGAAATTTGGGGAAATTGGTTTGCTTTaGGGCAAGTGCAACTGCTCCAAATACTTCTTCTGTTGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: SLMVLTLKFGEIGLL*GKCNCSKYFFCCVC
Trigger: ACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTCAAAGTTAAAACCATCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAATTTCGCAAGCTGATTaGGATTGCATAATGTCCCTT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKISQAD*DCIMSL
Trigger: AAGGGACATTATGCAATCCAAATCAGCTTGCGAAAT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGATTTCGCAAGCTGATTaGGATTGCATAATGTCCCTT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRISQAD*DCIMSL
Trigger: AAGGGACATTATGCAATCCAAATCAGCTTGCGAAAT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTCTGTTGTGTTTGTaGGGTACTACATTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLLLCL*GTTFLV
Trigger: CACCAAGAATGTAGTACCCAACAAACACAACAGAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTCTTCTGTTGTGTTaGTTGGGTACTACATTCTTG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLLLLC*LGTTFL
Trigger: CAAGAATGTAGTACCCAACAAACACAACAGAAGAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGGTCTGTATTTGTGTTaGCTGAAAATTCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKGLYLC*LKILSL
Trigger: CAGACTCAGAATTTTCAGCAAACACAAATACAGACC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGGTCTGTATTTGTGTTaGCTGAAAATTCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIGLYLC*LKILSL
Trigger: CAGACTCAGAATTTTCAGCAAACACAAATACAGACC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTCAGCGGTCTGTATTaGTGTTTGCTGAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFSGLY*CLLKIL
Trigger: CAGAATTTTCAGCAAACACAAATACAGACCGCTGAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCAGCGGTCTGTATTaGTGTTTGCTGAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFSGLY*CLLKIL
Trigger: CAGAATTTTCAGCAAACACAAATACAGACCGCTGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTCTCTTGTATGCCCTaGACTTCGAGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFSCMP*TSRHFS
Trigger: AGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTCTCTTGTATGCCCTaGACTTCGAGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFSCMP*TSRHFS
Trigger: AGAAAAATGTCTCGAAGTCAAGGGCATACAAGAGAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGAGGGAGGAGGAATGTaGCTATCATCAAGTTTAATT +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIEGGGM*LSSSLI
Trigger: AATTAAACTTGATGATAGCAACATTCCTCCTCCCTC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGAGAAGGGGAAGTGTTaGCTCTGTGAATTTCAGATT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTEKGKC*LCEFQI
Trigger: AATCTGAAATTCACAGAGCAAACACTTCCCCTTCTC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTAGTTTCTATCTTAATTaGACGACGAAGTGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISFYLN*TTKCCR
Trigger: CCTGCAACACTTCGTCGTCAAATTAAGATAGAAACT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGTTTCTATCTTAATTaGACGACGAAGTGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSFYLN*TTKCCR
Trigger: CCTGCAACACTTCGTCGTCAAATTAAGATAGAAACT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTCGACTCAACAATTaGACTCTCAAATGCATCCAT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLRLNN*TLKCIH
Trigger: ATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAACTCTTCCACTCTCTaGCCACGTCTTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRNSSTL*PRLLKI
Trigger: AATTTTCAAAAGACGTGGCAAGAGAGTGGAAGAGTT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAACTCTTCCACTCTCTaGCCACGTCTTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNSSTL*PRLLKI
Trigger: AATTTTCAAAAGACGTGGCAAGAGAGTGGAAGAGTT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCAACTCTTCCACTCTCTaGCCACGTCTTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFINSSTL*PRLLKI
Trigger: AATTTTCAAAAGACGTGGCAAGAGAGTGGAAGAGTT...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGTATACATATTTCCTaGTCTTGGAGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSIHIS*SWSSSF
Trigger: GAAGCTGCTGCTCCAAGACAAGGAAATATGTATACT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAAACTTAGTTTACTGTaGCAATGGTGGCATCGGAAG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTKLSLL*QWWHRK
Trigger: CTTCCGATGCCACCATTGCAACAGTAAACTAAGTTT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTTCCTGTTACTCTTaGTGTCTTCAGCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFSCYS*CLQLHS
Trigger: CGAGTGAAGCTGAAGACACAAAGAGTAACAGGAAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTTCTTCAGAGCCATaGCTAGTACATTCCTCGAAT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVSSEP*LVHSSN
Trigger: ATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295237.10
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCTAAAGGATGCAACTaGGCACCTATTTTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISKGCN*APIFRN
Trigger: GTTCCTAAAAATAGGTGCCAAGTTGCATCCTTTAGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409273.6
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCTAAAGGATGCAACTaGGCACCTATTTTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSKGCN*APIFRN
Trigger: GTTCCTAAAAATAGGTGCCAAGTTGCATCCTTTAGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409273.6
ENST00000409605.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTTTCCTTGCCTTTCTaGTCTGAATCTTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVSLPF*SESFTE
Trigger: TTCTGTGAAAGATTCAGACAAGAAAGGCAAGGAAAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTTTCCTTGCCTTTCTaGTCTGAATCTTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVSLPF*SESFTE
Trigger: TTCTGTGAAAGATTCAGACAAGAAAGGCAAGGAAAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTGGAATATACATCTTaGGGGACTGGTAGTCTTCTA +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILEYTS*GTGSLL
Trigger: TAGAAGACTACCAGTCCCCAAAGATGTATATTCCAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTGGAATATACATCTTaGGGGACTGGTAGTCTTCTA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLEYTS*GTGSLL
Trigger: TAGAAGACTACCAGTCCCCAAAGATGTATATTCCAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTCCCTTAATTTCTTaGAGCTCAGACCTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFPLIS*SSDLSC
Trigger: GCAGCTTAGGTCTGAGCTCAAAGAAATTAAGGGAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTAATTTCCAGCATTaGGCCCGAACCATCTCTAAT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFNFQH*ARTISN
Trigger: ATTAGAGATGGTTCGGGCCAAATGCTGGAAATTAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTCAAATAACCACTTaGCCTTACTCACCCCACCTT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFQITT*PYSPHL
Trigger: AAGGTGGGGTGAGTAAGGCAAAGTGGTTATTTGAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTCTTACGATTTCTTCTaGCTGGACTGTCTTTACTTG +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFISYDFF*LDCLYL
Trigger: CAAGTAAAGACAGTCCAGCAAGAAGAAATCGTAAGA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCTTACGATTTCTTCTaGCTGGACTGTCTTTACTTG +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISYDFF*LDCLYL
Trigger: CAAGTAAAGACAGTCCAGCAAGAAGAAATCGTAAGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTCCTGTTTTACAGTTaGCAATTTGACTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLLFYS*QFDCCF
Trigger: GAAACAGCAGTCAAATTGCAAACTGTAAAACAGGAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTACTTGTCTTTACATaGCCACCTTGTATATGGTCA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLLVFT*PPCIWS
Trigger: TGACCATATACAAGGTGGCAATGTAAAGACAAGTAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAATTCATGAAGTGGTGTaGTTTCAAAGAGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTIHEVV*FQRAMW
Trigger: CCACATGGCTCTTTGAAACAACACCACTTCATGAAT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCATTAGCTTGTATTTaGCCATTCGAACATCCCCTA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSLACI*PFEHPL
Trigger: TAGGGGATGTTCGAATGGCAAAATACAAGCTAATGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGCTTGGTTCATTAGCTaGTATTTTGCCATTCGAACA +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIAWFIS*YFAIRT
Trigger: TGTTCGAATGGCAAAATACAAGCTAATGAACCAAGC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCTTCTTCACGCTCAATaGTGTCACCATCATTTTCAT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQILLHAQ*CHHHFH
Trigger: ATGAAAATGATGGTGACACAATTGAGCGTGAAGAAG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTTCTTCACGCTCAATaGTGTCACCATCATTTTCAT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLLHAQ*CHHHFH
Trigger: ATGAAAATGATGGTGACACAATTGAGCGTGAAGAAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTCTTTCTCTCCTTCTaGTTTCTTAGCTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFFLSF*FLSCQC
Trigger: ACACTGACAGCTAAGAAACAAGAAGGAGAGAAAGAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCTTTCTCTCCTTCTaGTTTCTTAGCTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFFLSF*FLSCQC
Trigger: ACACTGACAGCTAAGAAACAAGAAGGAGAGAAAGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTCTTCAGTAACAGTTTaGTACCTTCAACATCACCAC +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQISSVTV*YLQHHH
Trigger: GTGGTGATGTTGAAGGTACAAAACTGTTACTGAAGA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGATTCTTTAAGTGACTaGAGTGTGGCTAGCATGTTA +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIDSLSD*SVASML
Trigger: TAACATGCTAGCCACACTCAAGTCACTTAAAGAATC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGATTCTTTAAGTGACTaGAGTGTGGCTAGCATGTTA +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIDSLSD*SVASML
Trigger: TAACATGCTAGCCACACTCAAGTCACTTAAAGAATC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGATTCTTTAAGTGACTaGAGTGTGGCTAGCATGTTA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKDSLSD*SVASML
Trigger: TAACATGCTAGCCACACTCAAGTCACTTAAAGAATC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTTCCAGGTCATCTTaGAGAAGCTCCTTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVSRSS*RSSFFR
Trigger: TCTGAAAAAGGAGCTTCTCAAAGATGACCTGGAAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAAATGGACCTGGCTTaGGCTGAAGAAGACTATTTT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQMDLA*AEEDYF
Trigger: AAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTTCTTCTACTAAATaGCCATGGCAAGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLSSTK*PWQDFP
Trigger: GGGGAAATCTTGCCATGGCAATTTAGTAGAAGAAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGCAAAAGCTGCCACATaGGTTGAAGGTTTATATTCT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRAKAAT*VEGLYS
Trigger: AGAATATAAACCTTCAACCAATGTGGCAGCTTTTGC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGCAAAAGCTGCCACATaGGTTGAAGGTTTATATTCT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIAKAAT*VEGLYS
Trigger: AGAATATAAACCTTCAACCAATGTGGCAGCTTTTGC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTCTCCCGCTTTTTGTaGGTTGCCTTAAATGTATTG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVSRFL*VALNVL
Trigger: CAATACATTTAAGGCAACCAACAAAAAGCGGGAGAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTCTCAGGGTTAAAGTaGATTGGATTCAAGGACCTT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFSGLK*IGFKDL
Trigger: AAGGTCCTTGAATCCAATCAACTTTAACCCTGAGAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTCTCAGGGTTAAAGTaGATTGGATTCAAGGACCTT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKFSGLK*IGFKDL
Trigger: AAGGTCCTTGAATCCAATCAACTTTAACCCTGAGAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTTTTTTGGGAATATTGTaGCATGAAGTCTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIFLGIL*HEVSTV
Trigger: CACAGTGGAGACTTCATGCAACAATATTCCCAAAAA...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTTTGGGAATATTGTaGCATGAAGTCTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFLGIL*HEVSTV
Trigger: CACAGTGGAGACTTCATGCAACAATATTCCCAAAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTTCGAGGCTTCTTTTaGGGAATATTGTTGCATGAA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVRGFF*GILLHE
Trigger: TTCATGCAACAATATTCCCAAAAAGAAGCCTCGAAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAGTTCGAGGCTTCTTTTaGGGAATATTGTTGCATGAA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKVRGFF*GILLHE
Trigger: TTCATGCAACAATATTCCCAAAAAGAAGCCTCGAAC...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATTATCTTTTATATGCTaGGGAAGTTTGGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLSFIC*GSLGLG
Trigger: GCCCAAACCCAAACTTCCCAAGCATATAAAAGATAA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS TCA 90 bp TCCAAATACTTCTTCTGTTGTGTTTGTTGGGTACTACATTCTTGGTaGCTTTGTTTAATTTCGCAAGCTGATTTGGATTGCATAATGTCC +
Preference number: 5 (lower is better)
Translates to: SKYFFCCVCWVLHSW*LCLISQADLDCIMS
Trigger: GGACATTATGCAATCCAAATCAGCTTGCGAAATTAAACAAAGTCACCAAGAATGTAGTACCCAACAAACACAACAGAAGAAGTATTTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp TTCTATTTGACTTTGCTTCAGAAACTGGGCCATGCTCAAATTCCCTaGACCATCTGTTTATTTCATTTTCAGGGTCATTCACGAAATTTT +
Preference number: 5 (lower is better)
Translates to: FYLTLLQKLGHAQIP*TICLFHFQGHSRNF
Trigger: AAAATTTCGTGAATGACCCTGAAAATGAAATAAACAGATGGTTCAGGGAATTTGAGCATGGCCCAGTTTCTGAAGCAAAGTCAAATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 90 bp TACATTGCCACCTTGTATATGGTCAATACTGGGCATAATATTATGTaGTTCTTCAGAAATCTGATCCAGTGGCTGAGTTTCAAATCTGTA +
Preference number: 5 (lower is better)
Translates to: YIATLYMVNTGHNIM*FFRNLIQWLSFKSV
Trigger: TACAGATTTGAAACTCAGCCACTGGATCAGATTTCTGAAGAATCACATAATATTATGCCCAGTATTGACCATATACAAGGTGGCAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 90 bp TTATTTGGCTCTGCTTCAAACTGTTTCACTCTCGACAAAATCTGTTaGAGTTCTTCACGTTTTCTCAAGAATTCCACTATATTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: LFGSASNCFTLDKIC*SSSRFLKNSTIFKA
Trigger: TGCCTTAAATATAGTGGAATTCTTGAGAAAACGTGAAGAACTGCAACAGATTTTGTCGAGAGTGAAACAGTTTGAAGCAGAGCCAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCACCTCTGTTATGTGTaGATTTTGGCTTTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIHLCYV*ILALSF
Trigger: AAAACTCAAAGCCAAAATCAACACATAACAGAGGTG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCAAATACTTCTTCTGTaGTGTTTGTTGGGTACTACA +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIQILLL*CLLGTT
Trigger: TGTAGTACCCAACAAACACAACAGAAGAAGTATTTG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGAGGGAGGAGGAATGTaGCTATCATCAAGTTTAATT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTEGGGM*LSSSLI
Trigger: AATTAAACTTGATGATAGCAACATTCCTCCTCCCTC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTCAAAAGATGTTTCCTaGCCTTTCTTGTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSKDVS*PFLSES
Trigger: AGATTCAGACAAGAAAGGCAAGGAAACATCTTTTGA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAATCAAAAGATGTTTCCTaGCCTTTCTTGTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSKDVS*PFLSES
Trigger: AGATTCAGACAAGAAAGGCAAGGAAACATCTTTTGA...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTTCAGGTGACATCTaGTCAAAAGATGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLSGDI*SKDVSL
Trigger: CAAGGAAACATCTTTTGACAAGATGTCACCTGAAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGACAACTGATGATGGCTaGAAAGTCTCTTCATATTCA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRTTDDG*KVSSYS
Trigger: TGAATATGAAGAGACTTTCAAGCCATCATCAGTTGT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTACAACTGATGATGGCTaGAAAGTCTCTTCATATTCA +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQITTDDG*KVSSYS
Trigger: TGAATATGAAGAGACTTTCAAGCCATCATCAGTTGT...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGATGGAATCCAATGGTaGATTCTCAAAGATCCATCT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTDGIQW*ILKDPS
Trigger: AGATGGATCTTTGAGAATCAACCATTGGATTCCATC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTGATGCATTTTATTCATaGAGTCCAATGGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIDAFYS*SPMALF
Trigger: AAACAAGGCCATTGGACTCAATGAATAAAATGCATC...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAATGTCTTCCAGAGGTaGGGTTTCAAAAATCCATTT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKNVFQR*GFKNPF
Trigger: AAATGGATTTTTGAAACCCAACCTCTGGAAGACATT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCTTACGATTTCTTCTaGCTGGACTGTCTTTACTTG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSYDFF*LDCLYL
Trigger: CAAGTAAAGACAGTCCAGCAAGAAGAAATCGTAAGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCGTTTCAAACAACCATTaGGCAGATTTCACATTTCCA +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIVSNNH*ADFTFP
Trigger: TGGAAATGTGAAATCTGCCAAATGGTTGTTTGAAAC...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGGTTTCAAACAACCATTaGGCAGATTTCACATTTCCA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRVSNNH*ADFTFP
Trigger: TGGAAATGTGAAATCTGCCAAATGGTTGTTTGAAAC...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAGCCATTTACAGGTTTaGACATCCCCTTTAACAATA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRSHLQV*TSPLTI
Trigger: TATTGTTAAAGGGGATGTCAAAACCTGTAAATGGCT...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAAAGCCATTTACAGGTTTaGACATCCCCTTTAACAATA +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKSHLQV*TSPLTI
Trigger: TATTGTTAAAGGGGATGTCAAAACCTGTAAATGGCT...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCTTTACAGTTTGCAATTaGACTGCTGTTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIFTVCN*TAVSES
Trigger: TGACTCTGAAACAGCAGTCAAATTGCAAACTGTAAA...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTTACAGTTTGCAATTaGACTGCTGTTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFTVCN*TAVSES
Trigger: TGACTCTGAAACAGCAGTCAAATTGCAAACTGTAAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTCACTTCTTCTCCTaGTATGCTGTCCAAATTTTC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLHFFS*YAVQIF
Trigger: GAAAATTTGGACAGCATACAAGGAGAAGAAGTGAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCAAAGAATTGTCTACTaGTCTTTACATTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIQRIVY*SLHCHL
Trigger: AAGGTGGCAATGTAAAGACAAGTAGACAATTCTTTG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TTGGTTTTTGCAGTTCCATCTATCTTTATGCTGCTTATGTCCAAAACCTTCATCCAAAGAATTGTCTACTaGTCTTTACATTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: LVFAVPSIFMLLMSKTFIQRIVY*SLHCHL
Trigger: AAGGTGGCAATGTAAAGACAAGTAGACAATTCTTTG...GATGAAGGTTTTGGACATAAGCAGCATAAAGATAGATGGAACTGCAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACTTCTTCACGCTCAATaGTGTCACCATCATTTTCAT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLLHAQ*CHHHFH
Trigger: ATGAAAATGATGGTGACACAATTGAGCGTGAAGAAG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATCTTCAGTAACAGTTTaGTACCTTCAACATCACCAC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSSVTV*YLQHHH
Trigger: GTGGTGATGTTGAAGGTACAAAACTGTTACTGAAGA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGCTCTTTGAAACTTCTTaGTGCTTCTTTCAAAGACCT +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRLFETS*CFFQRP
Trigger: AGGTCTTTGAAAGAAGCACAAAGAAGTTTCAAAGAG...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGAAACTCTTTGAAACTTCTTaGTGCTTCTTTCAAAGACCT +
Preference number: 5 (lower is better)
Translates to: IVTSSSSIKITPMMFYRKLFETS*CFFQRP
Trigger: AGGTCTTTGAAAGAAGCACAAAGAAGTTTCAAAGAG...TTTCCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TCTGTTTCTTCAGAGCCATTGCTAGTACATTCCTCGAATAAGTCTTTTCAGATTCAGAGCATCATTGTTTaGTTCACGATCTATGACAAT +
Preference number: 5 (lower is better)
Translates to: SVSSEPLLVHSSNKSFQIQSIIV*FTIYDN
Trigger: ATTGTCATAGATCGTGAACAAAACAATGATGCTCTG...AATCTGAAAAGACTTATTCGAGGAATGTACTAGCAATGGCTCTGAAGAAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTCTCCAGAGCATCATaGTTTTGTTCACGATCTATG +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFSRAS*FCSRSM
Trigger: CATAGATCGTGAACAAAACAATGATGCTCTGGAGAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGGTTTTACCAGCAGATaGGATGGAATTAAAGACATC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTGFTSR*DGIKDI
Trigger: GATGTCTTTAATTCCATCCAATCTGCTGGTAAAACC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGCAAAAGCTGCCACATaGGTTGAAGGTTTATATTCT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTAKAAT*VEGLYS
Trigger: AGAATATAAACCTTCAACCAATGTGGCAGCTTTTGC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp ATAATTGTGACAAGCAGCAGCAGTATAAAAATCACACCCATGATGTTTTACAGGTTCATTTCTGTTACATaGGATGTGTCTTGCTCTACA +
Preference number: 5 (lower is better)
Translates to: IIVTSSSSIKITPMMFYRFISVT*DVSCST
Trigger: TGTAGAGCAAGACACATCCAATGTAACAGAAATGAA...CCTGTAAAACATCATGGGTGTGATTTTTATACTGCTGCTGCTTGTCACAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTCGAGGCTTCTTTTaGGGAATATTGTTGCATGAA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVRGFF*GILLHE
Trigger: TTCATGCAACAATATTCCCAAAAAGAAGCCTCGAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTATCTTTTATATGCTaGGGAAGTTTGGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTLSFIC*GSLGLG
Trigger: GCCCAAACCCAAACTTCCCAAGCATATAAAAGATAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS GCA 90 bp ATAGATAATTGTTTTCTTTCATCAAGACTCTTACTAATAACGTTCTaGTTTGTCTCCGTGTGTTCACTGCTGGTCATCACCATTACTTTT +
Preference number: 5 (lower is better)
Translates to: IDNCFLSSRLLLITF*FVSVCSLLVITITF
Trigger: AAAAGTAATGGTGATGACCAGCAGTGAACACACGGAGACAAAGCAGAACGTTATTAGTAAGAGTCTTGATGAAAGAAAACAATTATCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAAATACTTCTTCTGTaGTGTTTGTTGGGTACTACA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQILLL*CLLGTT
Trigger: TGTAGTACCCAACAAACACAACAGAAGAAGTATTTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAAGTATTAGAGAAGACTaGTTTCTCTTGTATGCCCTT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTSIRED*FLLYAL
Trigger: AAGGGCATACAAGAGAAACAAGTCTTCTCTAATACT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAACAACTGATGATGGCTaGAAAGTCTCTTCATATTCA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTTTDDG*KVSSYS
Trigger: TGAATATGAAGAGACTTTCAAGCCATCATCAGTTGT...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACAGTTTCAAACAACCATTaGGCAGATTTCACATTTCCA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTVSNNH*ADFTFP
Trigger: TGGAAATGTGAAATCTGCCAAATGGTTGTTTGAAAC...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACATTTACAGTTTGCAATTaGACTGCTGTTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTFTVCN*TAVSES
Trigger: TGACTCTGAAACAGCAGTCAAATTGCAAACTGTAAA...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS-3UTR CAA 90 bp TACAAGAAATATCCCATTGAGATAGACACGAGATTTCTGAACACCATGTTTACACAGAGCATCATTGTTTaGTTCACGATCTATGACAAT +
Preference number: 5 (lower is better)
Translates to: YKKYPIEIDTRFLNTMFTQSIIV*FTIYDN
Trigger: ATTGTCATAGATCGTGAACAAAACAATGATGCTCTG...TGTAAACATGGTGTTCAGAAATCTCGTGTCTATCTCAATGGGATATTTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672671.1
CDS CCA 72 bp TACCTCGCCATCCGCTCCTTCAGGGAGACCACTTCGTaGAGGTCTGACACACCCTCGCCCCGAGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: YLAIRSFRETTS*RSDTPSPRAAL
Trigger: CAGTGCTGCTCGGGGCGAGGGTGTGTCAGACCTCCACGAAGTGGTCTCCCTGAAGGAGCGGATGGCGAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS GCA 72 bp AGCAGAGAAGCTGCGGCAGTCACCCCTGGAAACAGCTaGCTGGTACCTCGCCATCCGCTCCTTCAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: SREAAAVTPGNS*LVPRHPLLQGD
Trigger: GTCTCCCTGAAGGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCAGCTTCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CCA 72 bp GAGAAGCTGCGGCAGTCACCCCTGGAAACAGCTGCCTaGTACCTCGCCATCCGCTCCTTCAGGGAGACCACT +
Preference number: 6 (lower is better)
Translates to: EKLRQSPLETAA*YLAIRSFRETT
Trigger: AGTGGTCTCCCTGAAGGAGCGGATGGCGAGGTACCAGGCAGCTGTTTCCAGGGGTGACTGCCGCAGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CCA 72 bp TTTCTGCCTCAGGAGGTTGAGGGAGCCCTTCTGCATTaGGAACATGGATGGGTCCAGGTTGTCCGCCATGTC +
Preference number: 6 (lower is better)
Translates to: FLPQEVEGALLH*EHGWVQVVRHV
Trigger: GACATGGCGGACAACCTGGACCCATCCATGTTCCCAATGCAGAAGGGCTCCCTCAACCTCCTGAGGCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672716.1
CDS TCA 72 bp AGTTCGGTTGGCCGCTTCATATCTCTGTGTGTGCTCTaGCAGGCGAGGAGGCACTGCAACCTTGCGGATGAT +
Preference number: 6 (lower is better)
Translates to: SSVGRFISLCVL*QARRHCNLADD
Trigger: ATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTGTCAGAGCACACACAGAGATATGAAGCGGCCAACCGAACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp TCCCTTGTTTCATGTACAGCCAATTTCCCAGTCCCCTaGAAGCAATGGGTGCAGTGGAGGCCCGCTCCACTG +
Preference number: 6 (lower is better)
Translates to: SLVSCTANFPVP*KQWVQWRPAPL
Trigger: CAGTGGAGCGGGCCTCCACTGCACCCATTGCTTTCAGGGGACTGGGAAATTGGCTGTACATGAAACAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409273.6
ENST00000409605.1
ENST00000672671.1
CDS CCA 72 bp GAGCCTCAAACACACTCCTCAGCTCATCAAGGGCAATaGAAAAGCGTTCAATCCTGCGCCGACTGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: EPQTHSSAHQGQ*KSVQSCADCSG
Trigger: CCCTGAGCAGTCGGCGCAGGATTGAACGCTTTTCCATTGCCCTTGATGAGCTGAGGAGTGTGTTTGAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CCA 72 bp ACTGAGAGTATCTGCTCCCCCTTGCCACTTGGCCGCTaGCTCAAATGGACCTGGCTTTGGCTGAAGAAGACT +
Preference number: 6 (lower is better)
Translates to: TESICSPLPLGR*LKWTWLWLKKT
Trigger: AGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp ACTGTGCTTTTCCGGAGCAGAGGAGGAAAGGAGATGTaGTGGCTTTTGAGATGGAGTTGGAGGAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: TVLFRSRGGKEM*WLLRWSWRRRR
Trigger: CCTCCTCCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCCTCCTCTGCTCCGGAAAAGCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GGAACCGGGGTTGCTGCTGGACATGGGATGGCCCCTTaGGATAACTTTGCAGTGGTGTCTTTGAGTCTGACA +
Preference number: 6 (lower is better)
Translates to: GTGVAAGHGMAP*DNFAVVSLSLT
Trigger: TGTCAGACTCAAAGACACCACTGCAAAGTTATCCAAAGGGGCCATCCCATGTCCAGCAGCAACCCCGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTTCCCCATAGTTTGACTGAGAGTATCTGCTCCCCCTaGCCACTTGGCCGCTGGCTCAAATGGACCTGGCTT +
Preference number: 6 (lower is better)
Translates to: FPHSLTESICSP*PLGRWLKWTWL
Trigger: AAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAAACTATGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp CTGCTCCCCCTTGCCACTTGGCCGCTGGCTCAAATGGACCTGGCTTaGGCTGAAGAAGACTATTTTTGTTCCTCTGGACAGCAACCTGAT +
Preference number: 6 (lower is better)
Translates to: LLPLATWPLAQMDLA*AEEDYFCSSGQQPD
Trigger: ATCAGGTTGCTGTCCAGAGGAACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp ATGGCAAGATTTCCCCATAGTTTGACTGAGAGTATCTGCTCCCCCTaGCCACTTGGCCGCTGGCTCAAATGGACCTGGCTTTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: MARFPHSLTESICSP*PLGRWLKWTWLWLK
Trigger: CTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAAACTATGGGGAAATCTTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp GCTCTGACAGGCGAGGAGGCACTGCAACCTTGCGGATaGTTTCAACTGCATCATAACTTTCAGTGTCGGGCA +
Preference number: 6 (lower is better)
Translates to: ALTGEEALQPCG*FQLHHNFQCRA
Trigger: TGCCCGACACTGAAAGTTATGATGCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCCTCGCCTGTCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp TCAGCTCATCAAGGGCAATGGAAAAGCGTTCAATCCTaGGCCGACTGCTCAGGGAATCCTCCTTCAGCACTT +
Preference number: 6 (lower is better)
Translates to: SAHQGQWKSVQS*ADCSGNPPSAL
Trigger: AAGTGCTGAAGGAGGATTCCCTGAGCAGTCGGCGCAGGATTGAACGCTTTTCCATTGCCCTTGATGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS GCA 72 bp ATGGCAAGATTTCCCCATAGTTTGACTGAGAGTATCTaGTCCCCCTTGCCACTTGGCCGCTGGCTCAAATGG +
Preference number: 6 (lower is better)
Translates to: MARFPHSLTESI*SPLPLGRWLKW
Trigger: CCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAAACTATGGGGAAATCTTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp TTGAGGCTGTTCTTGGGGGTCTTTGTCAATTTTGGATaGAGGTGGAGCCTGAGAATCTGGGCTTGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: LRLFLGVFVNFG*RWSLRIWAWSV
Trigger: CACGGACCAAGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATTGACAAAGACCCCCAAGAACAGCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CCA 72 bp AGGAGACATGATGATTTCAGACCTCTTCTCTACAATTaGAACCGGGGTTGCTGCTGGACATGGGATGGCCCC +
Preference number: 6 (lower is better)
Translates to: RRHDDFRPLLYN*NRGCCWTWDGP
Trigger: GGGGCCATCCCATGTCCAGCAGCAACCCCGGTTCCAATTGTAGAGAAGAGGTCTGAAATCATCATGTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp TCCCCCTTGCCACTTGGCCGCTGGCTCAAATGGACCTaGCTTTGGCTGAAGAAGACTATTTTTGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SPLPLGRWLKWT*LWLKKTIFVPL
Trigger: CAGAGGAACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp CTGTTCTTGGGGGTCTTTGTCAATTTTGGATGCAGGTaGAGCCTGAGAATCTGGGCTTGGTCCGTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: LFLGVFVNFGCR*SLRIWAWSVEN
Trigger: GTTCTCCACGGACCAAGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATTGACAAAGACCCCCAAGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CAA 72 bp CAATTTTGGATGCAGGTGGAGCCTGAGAATCTGGGCTaGGTCCGTGGAGAACACTGCTTCAAAGATGCGGCT +
Preference number: 6 (lower is better)
Translates to: QFWMQVEPENLG*VRGEHCFKDAA
Trigger: AGCCGCATCTTTGAAGCAGTGTTCTCCACGGACCAAGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CAA 90 bp CCGGCTTCGAACTCCACATCTCTTCCCCTGTACTGTAGGGCAGACTaGTGGGATCCAAAGATTGAGGTGCTGATACTACCTCTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: PASNSTSLPLYCRAD*WDPKIEVLILPLLQ
Trigger: CTGAAGGAGAGGTAGTATCAGCACCTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTACAGGGGAAGAGATGTGGAGTTCGAAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CAA 90 bp CCGGAGCAGAGGAGGAAAGGAGATGTGCTGGCTTTTGAGATGGAGTaGGAGGAGGAGGAGGCGGCAGAAACATCGATGAACTTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: PEQRRKGDVLAFEME*EEEEAAETSMNFLF
Trigger: AAAGAGAAAGTTCATCGATGTTTCTGCCGCCTCCTCCTCCTCCAACTCCATCTCAAAAGCCAGCACATCTCCTTTCCTCCTCTGCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp GGTCTTTGTCAATTTTGGATGCAGGTGGAGCCTGAGAATCTGGGCTaGGTCCGTGGAGAACACTGCTTCAAAGATGCGGCTGTGACCACT +
Preference number: 6 (lower is better)
Translates to: GLCQFWMQVEPENLG*VRGEHCFKDAAVTT
Trigger: AGTGGTCACAGCCGCATCTTTGAAGCAGTGTTCTCCACGGACCAAGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATTGACAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CAA 90 bp AGGGAATCCTCCTTCAGCACTTCTGGCCGACCATATTCCCTGGTGTaGTTACTCTTGTCCACAGAATCCTTCTCTTCCGGCTTCGAACTC +
Preference number: 6 (lower is better)
Translates to: RESSFSTSGRPYSLV*LLLSTESFSSGFEL
Trigger: GAGTTCGAAGCCGGAAGAGAAGGATTCTGTGGACAAGAGTAACAACACCAGGGAATATGGTCGGCCAGAAGTGCTGAAGGAGGATTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS TCA 72 bp CACCTTGGCCAAACCACCAGGCACTGCGCACATTTCTaGTTCTTCCATCATATTAGCAGAGAAGCTGCGGCA +
Preference number: 6 (lower is better)
Translates to: HLGQTTRHCAHF*FFHHISREAAA
Trigger: TGCCGCAGCTTCTCTGCTAATATGATGGAAGAATCAGAAATGTGCGCAGTGCCTGGTGGTTTGGCCAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS GCA 72 bp GCGAGGAGGCACTGCAACCTTGCGGATGATTTCAACTaGATCATAACTTTCAGTGTCGGGCACCATGTGATC +
Preference number: 6 (lower is better)
Translates to: ARRHCNLADDFN*IITFSVGHHVI
Trigger: GATCACATGGTGCCCGACACTGAAAGTTATGATGCAGTTGAAATCATCCGCAAGGTTGCAGTGCCTCCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp TCTGGGCTTGGTCCGTGGAGAACACTGCTTCAAAGATaGGGCTGTGACCACTTTCAGGTGACATCTTGTCAA +
Preference number: 6 (lower is better)
Translates to: SGLGPWRTLLQR*GCDHFQVTSCQ
Trigger: TTGACAAGATGTCACCTGAAAGTGGTCACAGCCGCATCTTTGAAGCAGTGTTCTCCACGGACCAAGCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CCA 72 bp GGAGCCTCTTGGCAGCGACTGTTTCTGGCGATGTTGTaGAGAGTTGGTTATCAGAACACACTCCTAGTATCC +
Preference number: 6 (lower is better)
Translates to: GASWQRLFLAML*RVGYQNTLLVS
Trigger: GGATACTAGGAGTGTGTTCTGATAACCAACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp ATCTGCTCCCCCTTGCCACTTGGCCGCTGGCTCAAATaGACCTGGCTTTGGCTGAAGAAGACTATTTTTGTT +
Preference number: 6 (lower is better)
Translates to: ICSPLPLGRWLK*TWLWLKKTIFV
Trigger: AACAAAAATAGTCTTCTTCAGCCAAAGCCAGGTCCATTTGAGCCAGCGGCCAAGTGGCAAGGGGGAGCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp GGATTTGAGGCTGTTCTTGGGGGTCTTTGTCAATTTTaGATGCAGGTGGAGCCTGAGAATCTGGGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: GFEAVLGGLCQF*MQVEPENLGLV
Trigger: GACCAAGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATTGACAAAGACCCCCAAGAACAGCCTCAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CAA 72 bp GGTGGAGCCTCTTGGCAGCGACTGTTTCTGGCGATGTaGTGGAGAGTTGGTTATCAGAACACACTCCTAGTA +
Preference number: 6 (lower is better)
Translates to: GGASWQRLFLAM*WRVGYQNTLLV
Trigger: TACTAGGAGTGTGTTCTGATAACCAACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TCCTTCAGCACTTCTGGCCGACCATATTCCCTGGTGTTGTTACTCTaGTCCACAGAATCCTTCTCTTCCGGCTTCGAACTCCACATCTCT +
Preference number: 6 (lower is better)
Translates to: SFSTSGRPYSLVLLL*STESFSSGFELHIS
Trigger: AGAGATGTGGAGTTCGAAGCCGGAAGAGAAGGATTCTGTGGACAAGAGTAACAACACCAGGGAATATGGTCGGCCAGAAGTGCTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS TCA 72 bp GATAATCACAAGATTCCCATTTCTGCCTCAGGAGGTTaGGGGAGCCCTTCTGCATTGGGAACATGGATGGGT +
Preference number: 6 (lower is better)
Translates to: DNHKIPISASGG*GSPSALGTWMG
Trigger: ACCCATCCATGTTCCCAATGCAGAAGGGCTCCCTCAACCTCCTGAGGCAGAAATGGGAATCTTGTGATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS TCA 72 bp ACTACCTCTCCTTCAGGCGCAAGCAATTTGCTTTCCTaGGGCTGGAAAATTGTACAATGGCTGTCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: TTSPSGASNLLS*GWKIVQWLSLG
Trigger: TCCCAGGGACAGCCATTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGCTTGCGCCTGAAGGAGAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS TCA 72 bp GTAGGGCAGACTTGTGGGATCCAAAGATTGAGGTGCTaGTACTACCTCTCCTTCAGGCGCAAGCAATTTGCT +
Preference number: 6 (lower is better)
Translates to: VGQTCGIQRLRC*YYLSFRRKQFA
Trigger: AGCAAATTGCTTGCGCCTGAAGGAGAGGTAGTATCAGCACCTCAATCTTTGGATCCCACAAGTCTGCCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS GCA 72 bp TTCAGAGCGACTCCTGGGTGGAGAAGGGGAAGTGTTTaGTCTGTGAATTTCAGATTTTTGCGACATGGGCCT +
Preference number: 6 (lower is better)
Translates to: FRATPGWRRGSV*SVNFRFLRHGP
Trigger: AGGCCCATGTCGCAAAAATCTGAAATTCACAGAGCAAACACTTCCCCTTCTCCACCCAGGAGTCGCTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp CCATTTCCTGGCTGCTTCTTGAAGTGCCAACCTGGCTaGTATGAATTGCCTCCTGCTCAGATCTGTTCTGAT +
Preference number: 6 (lower is better)
Translates to: PFPGCFLKCQPG*YELPPAQICSD
Trigger: ATCAGAACAGATCTGAGCAGGAGGCAATTCATAGCAGCCAGGTTGGCACTTCAAGAAGCAGCCAGGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CCA 72 bp TGTCTTCTGAAGCTGCTAAAACATGGTGGAGCCTCTTaGCAGCGACTGTTTCTGGCGATGTTGTGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: CLLKLLKHGGAS*QRLFLAMLWRV
Trigger: AACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTCAGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp TCCACATCTCTTCCCCTGTACTGTAGGGCAGACTTGTaGGATCCAAAGATTGAGGTGCTGATACTACCTCTC +
Preference number: 6 (lower is better)
Translates to: STSLPLYCRADL*DPKIEVLILPL
Trigger: GAGAGGTAGTATCAGCACCTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTACAGGGGAAGAGATGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CAA 72 bp TTGTCTTCTGAAGCTGCTAAAACATGGTGGAGCCTCTaGGCAGCGACTGTTTCTGGCGATGTTGTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LSSEAAKTWWSL*AATVSGDVVES
Trigger: ACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTCAGAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp ATGCAGATTCCTCTTGGAAGGTGGTTCTCATCTCAGTaGCAGAAGCATCTGCGGTTGCATATCCCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: MQIPLGRWFSSQ*QKHLRLHIPGL
Trigger: AAGGCCTGGGATATGCAACCGCAGATGCTTCTGCAACTGAGATGAGAACCACCTTCCAAGAGGAATCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp ACTTCTGGCCGACCATATTCCCTGGTGTTGTTACTCTaGTCCACAGAATCCTTCTCTTCCGGCTTCGAACTC +
Preference number: 6 (lower is better)
Translates to: TSGRPYSLVLLL*STESFSSGFEL
Trigger: GAGTTCGAAGCCGGAAGAGAAGGATTCTGTGGACAAGAGTAACAACACCAGGGAATATGGTCGGCCAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CAA 90 bp CTAAAACATGGTGGAGCCTCTTGGCAGCGACTGTTTCTGGCGATGTaGTGGAGAGTTGGTTATCAGAACACACTCCTAGTATCCGAGCAT +
Preference number: 6 (lower is better)
Translates to: LKHGGASWQRLFLAM*WRVGYQNTLLVSEH
Trigger: ATGCTCGGATACTAGGAGTGTGTTCTGATAACCAACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TCTACAATTGGAACCGGGGTTGCTGCTGGACATGGGATGGCCCCTTaGGATAACTTTGCAGTGGTGTCTTTGAGTCTGACAAGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: STIGTGVAAGHGMAP*DNFAVVSLSLTSCS
Trigger: TGAACAACTTGTCAGACTCAAAGACACCACTGCAAAGTTATCCAAAGGGGCCATCCCATGTCCAGCAGCAACCCCGGTTCCAATTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp TCTACTAAATTGCCATGGCAAGATTTCCCCATAGTTTaGCTGAGAGTATCTGCTCCCCCTTGCCACTTGGCC +
Preference number: 6 (lower is better)
Translates to: STKLPWQDFPIV*LRVSAPPCHLA
Trigger: GGCCAAGTGGCAAGGGGGAGCAGATACTCTCAGTCAAACTATGGGGAAATCTTGCCATGGCAATTTAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp GGTGGTTCTCATCTCAGTTGCAGAAGCATCTGCGGTTaGATATCCCAGGCCTTTAAAAACTCTTCCACTCTC +
Preference number: 6 (lower is better)
Translates to: GGSHLSCRSICG*ISQAFKNSSTL
Trigger: GAGAGTGGAAGAGTTTTTAAAGGCCTGGGATATGCAACCGCAGATGCTTCTGCAACTGAGATGAGAACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp CTCCTAGTATCCGAGCATTACTTTGAGAGCCTGGGCTaGGTTGAACCACAGTGCATTCTGAATCAATTCCAG +
Preference number: 6 (lower is better)
Translates to: LLVSEHYFESLG*VEPQCILNQFQ
Trigger: CTGGAATTGATTCAGAATGCACTGTGGTTCAACCCAGCCCAGGCTCTCAAAGTAATGCTCGGATACTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp TTTGTCAATTTTGGATGCAGGTGGAGCCTGAGAATCTaGGCTTGGTCCGTGGAGAACACTGCTTCAAAGATG +
Preference number: 6 (lower is better)
Translates to: FVNFGCRWSLRI*AWSVENTASKM
Trigger: CATCTTTGAAGCAGTGTTCTCCACGGACCAAGCCCAGATTCTCAGGCTCCACCTGCATCCAAAATTGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS CAA 72 bp AACTCCACATCTCTTCCCCTGTACTGTAGGGCAGACTaGTGGGATCCAAAGATTGAGGTGCTGATACTACCT +
Preference number: 6 (lower is better)
Translates to: NSTSLPLYCRAD*WDPKIEVLILP
Trigger: AGGTAGTATCAGCACCTCAATCTTTGGATCCCACAAGTCTGCCCTACAGTACAGGGGAAGAGATGTGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CAA 90 bp CCTCTCCTTCAGGCGCAAGCAATTTGCTTTCCTGAGGCTGGAAAATaGTACAATGGCTGTCCCTGGGATGACACTCACTTCTCTGATAAT +
Preference number: 6 (lower is better)
Translates to: PLLQAQAICFPEAGK*YNGCPWDDTHFSDN
Trigger: ATTATCAGAGAAGTGAGTGTCATCCCAGGGACAGCCATTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGCTTGCGCCTGAAGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CAA 90 bp AGCCTGAGAATTCTGAGAGTTCGAGGCTTCTTTTTGGGAATATTGTaGCATGAAGTCTCCACTGTGCTTTTCCGGAGCAGAGGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: SLRILRVRGFFLGIL*HEVSTVLFRSRGGK
Trigger: CTTTCCTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTCATGCAACAATATTCCCAAAAAGAAGCCTCGAACTCTCAGAATTCTCAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp TGGTCCGTGGAGAACACTGCTTCAAAGATGCGGCTGTaGCCACTTTCAGGTGACATCTTGTCAAAAGATGTT +
Preference number: 6 (lower is better)
Translates to: WSVENTASKMRL*PLSGDILSKDV
Trigger: AACATCTTTTGACAAGATGTCACCTGAAAGTGGTCACAGCCGCATCTTTGAAGCAGTGTTCTCCACGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409728.5
CDS GCA 72 bp GTGCTGATACTACCTCTCCTTCAGGCGCAAGCAATTTaGTTTCCTGAGGCTGGAAAATTGTACAATGGCTGT +
Preference number: 6 (lower is better)
Translates to: VLILPLLQAQAI*FPEAGKLYNGC
Trigger: ACAGCCATTGTACAATTTTCCAGCCTCAGGAAAGCAAATTGCTTGCGCCTGAAGGAGAGGTAGTATCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CCA 72 bp TTGGCAGCGACTGTTTCTGGCGATGTTGTGGAGAGTTaGTTATCAGAACACACTCCTAGTATCCGAGCATTA +
Preference number: 6 (lower is better)
Translates to: LAATVSGDVVES*LSEHTPSIRAL
Trigger: TAATGCTCGGATACTAGGAGTGTGTTCTGATAACCAACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp AATCCTCCTTCAGCACTTCTGGCCGACCATATTCCCTaGTGTTGTTACTCTTGTCCACAGAATCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: NPPSALLADHIP*CCYSCPQNPSL
Trigger: AAGAGAAGGATTCTGTGGACAAGAGTAACAACACCAGGGAATATGGTCGGCCAGAAGTGCTGAAGGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CCA 72 bp ATGCTTGGGAAGTTTGGGTTTGGGCAATGTGGGAGGTaGCAACACACCGGTTTTTCCTGTTATGATTTTAGC +
Preference number: 6 (lower is better)
Translates to: MLGKFGFGQCGR*QHTGFSCYDFS
Trigger: GCTAAAATCATAACAGGAAAAACCGGTGTGTTGCCACCTCCCACATTGCCCAAACCCAAACTTCCCAAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TCAATTTCCACTTCCTTTCCACCGTACTCAGCTGGTTaGTTTCCACTCTTAGGAGCCTCAAACACACTCCTC +
Preference number: 6 (lower is better)
Translates to: SISTSFPPYSAG*FPLLGASNTLL
Trigger: GAGGAGTGTGTTTGAGGCTCCTAAGAGTGGAAACAAACCAGCTGAGTACGGTGGAAAGGAAGTGGAAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409728.5
ENST00000672716.1
CDS CAA 90 bp ATCTTATCTTTGTCTTCTGAAGCTGCTAAAACATGGTGGAGCCTCTaGGCAGCGACTGTTTCTGGCGATGTTGTGGAGAGTTGGTTATCA +
Preference number: 6 (lower is better)
Translates to: ILSLSSEAAKTWWSL*AATVSGDVVESWLS
Trigger: TGATAACCAACTCTCCACAACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTCAGAAGACAAAGATAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TTCACTTCCTGGAAGTTTCCCTCTGTCAGATCCGCTAAATTCTCTTaGCTTCCTGGGAACCATCTTGAGCTTATCTTCCTGGTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: FTSWKFPSVRSAKFS*LPGNHLELIFLVLL
Trigger: CAGAAGAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAAGCAAAGAGAATTTAGCGGATCTGACAGAGGGAAACTTCCAGGAAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TTTAGCCTGAGAATTCTGAGAGTTCGAGGCTTCTTTTTGGGAATATaGTTGCATGAAGTCTCCACTGTGCTTTTCCGGAGCAGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: FSLRILRVRGFFLGI*LHEVSTVLFRSRGG
Trigger: TCCTCCTCTGCTCCGGAAAAGCACAGTGGAGACTTCATGCAACAATATTCCCAAAAAGAAGCCTCGAACTCTCAGAATTCTCAGGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp TTATTAGGGCCAGCAGTCGCTTCAAAGATGCGGCTGTaGCCACTTTCAGGTGACATCTTGTCAAAAGATGTT +
Preference number: 6 (lower is better)
Translates to: LLGPAVASKMRL*PLSGDILSKDV
Trigger: AACATCTTTTGACAAGATGTCACCTGAAAGTGGTCACAGCCGCATCTTTGAAGCGACTGCTGGCCCTAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000628543.2
ENST00000672277.1
ENST00000672716.1
CDS GCA 72 bp GGTCACTTCATGATAGGACCCTTCTCGGTCTTGAATTaGATAGAGTGGCTGGGTTTCAAAGAGCATTCTGTA +
Preference number: 6 (lower is better)
Translates to: GHFMIGPFSVLN*IEWLGFKEHSV
Trigger: TACAGAATGCTCTTTGAAACCCAGCCACTCTATGCAATTCAAGACCGAGAAGGGTCCTATCATGAAGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp ATCTTATCTTTGTCTTCTGAAGCTGCTAAAACATGGTaGAGCCTCTTGGCAGCGACTGTTTCTGGCGATGTT +
Preference number: 6 (lower is better)
Translates to: ILSLSSEAAKTW*SLLAATVSGDV
Trigger: AACATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTCAGAAGACAAAGATAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp TTCATCTTATCTTTGTCTTCTGAAGCTGCTAAAACATaGTGGAGCCTCTTGGCAGCGACTGTTTCTGGCGAT +
Preference number: 6 (lower is better)
Translates to: FILSLSSEAAKT*WSLLAATVSGD
Trigger: ATCGCCAGAAACAGTCGCTGCCAAGAGGCTCCACCATGTTTTAGCAGCTTCAGAAGACAAAGATAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp GGGATGGCATCAGGCTGTTTAGATTCTTTCCATCGATaGCTTGATTCTTTAAGTGACTTGAGTGTGGCTAGC +
Preference number: 6 (lower is better)
Translates to: GMASGCLDSFHR*LDSLSDLSVAS
Trigger: GCTAGCCACACTCAAGTCACTTAAAGAATCAAGCCATCGATGGAAAGAATCTAAACAGCCTGATGCCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TGGAAGTTTCCCTCTGTCAGATCCGCTAAATTCTCTTaGCTTCCTGGGAACCATCTTGAGCTTATCTTCCTG +
Preference number: 6 (lower is better)
Translates to: WKFPSVRSAKFS*LPGNHLELIFL
Trigger: CAGGAAGATAAGCTCAAGATGGTTCCCAGGAAGCAAAGAGAATTTAGCGGATCTGACAGAGGGAAACTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TGGTCACTTCATGATAGGACCCTTCTCGGTCTTGAATaGCATAGAGTGGCTGGGTTTCAAAGAGCATTCTGT +
Preference number: 6 (lower is better)
Translates to: WSLHDRTLLGLE*HRVAGFQRAFC
Trigger: ACAGAATGCTCTTTGAAACCCAGCCACTCTATGCAATTCAAGACCGAGAAGGGTCCTATCATGAAGTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp CCTCTGTCAGATCCGCTAAATTCTCTTTGCTTCCTGGGAACCATCTaGAGCTTATCTTCCTGGTTCTTCTGTATGGATTCTGTAGGCAAT +
Preference number: 6 (lower is better)
Translates to: PLSDPLNSLCFLGTI*SLSSWFFCMDSVGN
Trigger: ATTGCCTACAGAATCCATACAGAAGAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAAGCAAAGAGAATTTAGCGGATCTGACAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp GTATTACGGGAAGAAGTAATTTCGTCCTCAAATTGTTTCTTCACCTaGGCCAAACCACCAGGCACTGCGCACATTTCTGATTCTTCCATC +
Preference number: 6 (lower is better)
Translates to: VLREEVISSSNCFFT*AKPPGTAHISDSSI
Trigger: GATGGAAGAATCAGAAATGTGCGCAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATTTGAGGACGAAATTACTTCTTCCCGTAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CAA 90 bp GTATTGAGCAAAGGTATTACGGGAAGAAGTAATTTCGTCCTCAAATaGTTTCTTCACCTTGGCCAAACCACCAGGCACTGCGCACATTTC +
Preference number: 6 (lower is better)
Translates to: VLSKGITGRSNFVLK*FLHLGQTTRHCAHF
Trigger: GAAATGTGCGCAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATTTGAGGACGAAATTACTTCTTCCCGTAATACCTTTGCTCAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS TCA 72 bp GGTGGAGAGTCCCTACCACGAGTTTCTATCTTAATTTaGCGACGAAGTGTTGCAGGAGACATGATGATTTCA +
Preference number: 6 (lower is better)
Translates to: GGESLPRVSILI*RRSVAGDMMIS
Trigger: TGAAATCATCATGTCTCCTGCAACACTTCGTCGTCAAATTAAGATAGAAACTCGTGGTAGGGACTCTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp AATTTCCTGATGGGTTTTCACGTGACTACGAACAGTTaGTTCATGATGAGCTGCTACTTGGTGCTGTACTGT +
Preference number: 6 (lower is better)
Translates to: NFLMGFHVTTNS*FMMSCYLVLYC
Trigger: ACAGTACAGCACCAAGTAGCAGCTCATCATGAAGCAACTGTTCGTAGTCACGTGAAAACCCATCAGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp AAGTGTTTGCTCTGTGAATTTCAGATTTTTGCGACATaGGCCTTCTTGGTGGGGGTTCAACATAACTGTCCT +
Preference number: 6 (lower is better)
Translates to: KCLLCEFQIFAT*AFLVGVQHNCP
Trigger: AGGACAGTTATGTTGAACCCCCACCAAGAAGGCCCATGTCGCAAAAATCTGAAATTCACAGAGCAAACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp AGGTGGAGAGTCCCTACCACGAGTTTCTATCTTAATTaGACGACGAAGTGTTGCAGGAGACATGATGATTTC +
Preference number: 6 (lower is better)
Translates to: RWRVPTTSFYLN*TTKCCRRHDDF
Trigger: GAAATCATCATGTCTCCTGCAACACTTCGTCGTCAAATTAAGATAGAAACTCGTGGTAGGGACTCTCCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GAAGAAGTAATTTCGTCCTCAAATTGTTTCTTCACCTaGGCCAAACCACCAGGCACTGCGCACATTTCTGAT +
Preference number: 6 (lower is better)
Translates to: EEVISSSNCFFT*AKPPGTAHISD
Trigger: ATCAGAAATGTGCGCAGTGCCTGGTGGTTTGGCCAAGGTGAAGAAACAATTTGAGGACGAAATTACTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CAA 90 bp TGTGATTGTAGGTGGAGAGTCCCTACCACGAGTTTCTATCTTAATTaGACGACGAAGTGTTGCAGGAGACATGATGATTTCAGACCTCTT +
Preference number: 6 (lower is better)
Translates to: CDCRWRVPTTSFYLN*TTKCCRRHDDFRPL
Trigger: AAGAGGTCTGAAATCATCATGTCTCCTGCAACACTTCGTCGTCAAATTAAGATAGAAACTCGTGGTAGGGACTCTCCACCTACAATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp AATATCACCTTCATCAGGAGAGCCATTGTTGATGGAATCCAATGGTaGATTCTCAAAGATCCATCTAATGGACTGCACCTCTCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: NITFIRRAIVDGIQW*ILKDPSNGLHLSLQ
Trigger: CTGAAGGGAGAGGTGCAGTCCATTAGATGGATCTTTGAGAATCAACCATTGGATTCCATCAACAATGGCTCTCCTGATGAAGGTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp AAACATCCATGTGGTATATTTCACATCACCACCAGCAATGATTTCTaGATCAGCAATGCCCCTGGAAATATCACCTTCATCAGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: KHPCGIFHITTSNDF*ISNAPGNITFIRRA
Trigger: GGCTCTCCTGATGAAGGTGATATTTCCAGGGGCATTGCTGATCAAGAAATCATTGCTGGTGGTGATGTGAAATATACCACATGGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp CCCTGGAAATATCACCTTCATCAGGAGAGCCATTGTTaGTGGAATCCAATGGTTGATTCTCAAAGATCCATC +
Preference number: 6 (lower is better)
Translates to: PWKYHLHQESHC*WNPMVDSQRSI
Trigger: GATGGATCTTTGAGAATCAACCATTGGATTCCATCAACAATGGCTCTCCTGATGAAGGTGATATTTCCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp TTTGGGGAAATTGGTTTGCTTTGGGGCAAGTGCAACTaGTCCAAATACTTCTTCTGTTGTGTTTGTTGGGTA +
Preference number: 6 (lower is better)
Translates to: FGEIGLLWGKCN*SKYFFCCVCWV
Trigger: TACCCAACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp CTGTCATTTGTGTTTTCAAAAACATACCGGGCTTGTTaGACATCTGCTGAGACTGAACTCCCTGAGTTCATT +
Preference number: 6 (lower is better)
Translates to: LSFVFSKTYRAC*TSAETELPEFI
Trigger: AATGAACTCAGGGAGTTCAGTCTCAGCAGATGTGCAACAAGCCCGGTATGTTTTTGAAAACACAAATGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp TCTGAAGGAACCACTAGCAGCATGATTTATATTTACTaGTATTGTGATTGTAGGTGGAGAGTCCCTACCACG +
Preference number: 6 (lower is better)
Translates to: SEGTTSSMIYIY*YCDCRWRVPTT
Trigger: CGTGGTAGGGACTCTCCACCTACAATCACAATACCAGTAAATATAAATCATGCTGCTAGTGGTTCCTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp ACCTTCATCAGGAGAGCCATTGTTGATGGAATCCAATaGTTGATTCTCAAAGATCCATCTAATGGACTGCAC +
Preference number: 6 (lower is better)
Translates to: TFIRRAIVDGIQ*LILKDPSNGLH
Trigger: GTGCAGTCCATTAGATGGATCTTTGAGAATCAACCATTGGATTCCATCAACAATGGCTCTCCTGATGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTGGGGCAAGTGCAACTGCTCCAAATACTTCTTCTGTaGTGTTTGTTGGGTACTACATTCTTGGTGACTTTG +
Preference number: 6 (lower is better)
Translates to: LGQVQLLQILLL*CLLGTTFLVTL
Trigger: CAAAGTCACCAAGAATGTAGTACCCAACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GATCCGCTAAATTCTCTTTGCTTCCTGGGAACCATCTaGAGCTTATCTTCCTGGTTCTTCTGTATGGATTCT +
Preference number: 6 (lower is better)
Translates to: DPLNSLCFLGTI*SLSSWFFCMDS
Trigger: AGAATCCATACAGAAGAACCAGGAAGATAAGCTCAAGATGGTTCCCAGGAAGCAAAGAGAATTTAGCGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTCATCAGGAGAGCCATTGTTGATGGAATCCAATGGTaGATTCTCAAAGATCCATCTAATGGACTGCACCTC +
Preference number: 6 (lower is better)
Translates to: FIRRAIVDGIQW*ILKDPSNGLHL
Trigger: GAGGTGCAGTCCATTAGATGGATCTTTGAGAATCAACCATTGGATTCCATCAACAATGGCTCTCCTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp GCTTTGGGGCAAGTGCAACTGCTCCAAATACTTCTTCTGTTGTGTTaGTTGGGTACTACATTCTTGGTGACTTTGTTTAATTTCGCAAGC +
Preference number: 6 (lower is better)
Translates to: ALGQVQLLQILLLLC*LGTTFLVTLFNFAS
Trigger: GCTTGCGAAATTAAACAAAGTCACCAAGAATGTAGTACCCAACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TTTATGAACATAAGTAGCTCTCTTCTCCACTTTCCTGATTTCCTCTaGAGCGTCCACAGATTCTCTGAAGGAACCACTAGCAGCATGATT +
Preference number: 6 (lower is better)
Translates to: FMNISSSLLHFPDFL*SVHRFSEGTTSSMI
Trigger: AATCATGCTGCTAGTGGTTCCTTCAGAGAATCTGTGGACGCTCAAGAGGAAATCAGGAAAGTGGAGAAGAGAGCTACTTATGTTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp GCTGCTATGAATTGCCTCCTGCTCAGATCTGTTCTGATGTTGATATaGGTATTGAGCAAAGGTATTACGGGAAGAAGTAATTTCGTCCTC +
Preference number: 6 (lower is better)
Translates to: AAMNCLLLRSVLMLI*VLSKGITGRSNFVL
Trigger: GAGGACGAAATTACTTCTTCCCGTAATACCTTTGCTCAATACCAATATCAACATCAGAACAGATCTGAGCAGGAGGCAATTCATAGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS GCA 72 bp TGTTTTCTTTCATCAAGACTCTTACTAATAACGTTCTaGTTTGTCTCCGTGTGTTCACTGCTGGTCATCACC +
Preference number: 6 (lower is better)
Translates to: CFLSSRLLLITF*FVSVCSLLVIT
Trigger: GGTGATGACCAGCAGTGAACACACGGAGACAAAGCAGAACGTTATTAGTAAGAGTCTTGATGAAAGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp ACCACGAGTTTCTATCTTAATTTGACGACGAAGTGTTaGAGGAGACATGATGATTTCAGACCTCTTCTCTAC +
Preference number: 6 (lower is better)
Translates to: TTSFYLNLTTKC*RRHDDFRPLLY
Trigger: GTAGAGAAGAGGTCTGAAATCATCATGTCTCCTGCAACACTTCGTCGTCAAATTAAGATAGAAACTCGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp TCTTCGACTCAACAATTTGACTCTCAAATGCATCCATaGCTGAGAAATGTTCACTTAGAGACCTGGTTTCAG +
Preference number: 6 (lower is better)
Translates to: SSTQQFDSQMHP*LRNVHLETWFQ
Trigger: CTGAAACCAGGTCTCTAAGTGAACATTTCTCAGGCATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp CAAGCTCATTTACCACTTATAAATGCAGATTCCTCTTaGAAGGTGGTTCTCATCTCAGTTGCAGAAGCATCT +
Preference number: 6 (lower is better)
Translates to: QAHLPLINADSS*KVVLISVAEAS
Trigger: AGATGCTTCTGCAACTGAGATGAGAACCACCTTCCAAGAGGAATCTGCATTTATAAGTGGTAAATGAGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672277.1
CDS CAA 72 bp GCTATGAATTGCCTCCTGCTCAGATCTGTTCTGATGTaGATATTGGTATTGAGCAAAGGTATTACGGGAAGA +
Preference number: 6 (lower is better)
Translates to: AMNCLLLRSVLM*ILVLSKGITGR
Trigger: TCTTCCCGTAATACCTTTGCTCAATACCAATATCAACATCAGAACAGATCTGAGCAGGAGGCAATTCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CAA 72 bp TGTGGTATATTTCACATCACCACCAGCAATGATTTCTaGATCAGCAATGCCCCTGGAAATATCACCTTCATC +
Preference number: 6 (lower is better)
Translates to: CGIFHITTSNDF*ISNAPGNITFI
Trigger: GATGAAGGTGATATTTCCAGGGGCATTGCTGATCAAGAAATCATTGCTGGTGGTGATGTGAAATATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GTTTCAAATAACCACTTTGCCTTACTCACCCCACCTTaGACATTTTCTTCCATGGATATTCCTCGGACAACT +
Preference number: 6 (lower is better)
Translates to: VSNNHFALLTPP*TFSSMDIPRTT
Trigger: AGTTGTCCGAGGAATATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTAAGGCAAAGTGGTTATTTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TGCTGTTCTCCTGTAGTATCAGTCCAGACACCCGTTTaGTCTCCTGATTCCAAAACATTAGATTTATGGTGT +
Preference number: 6 (lower is better)
Translates to: CCSPVVSVQTPV*SPDSKTLDLWC
Trigger: ACACCATAAATCTAATGTTTTGGAATCAGGAGACAAAACGGGTGTCTGGACTGATACTACAGGAGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp CATTTTCTGGTGGTCATTTCTCAGTTCATATGTCTGTaGCTTTCCAACGGTTTTACCAGCAGATTGGATGGA +
Preference number: 6 (lower is better)
Translates to: HFLVVISQFICL*LSNGFTSRLDG
Trigger: TCCATCCAATCTGCTGGTAAAACCGTTGGAAAGCAACAGACATATGAACTGAGAAATGACCACCAGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTTAGCCTGAGAATTCTGAGAGTTCGAGGCTTCTTTTaGGGAATATTGTTGCATGAAGTCTCCACTGTGCTT +
Preference number: 6 (lower is better)
Translates to: FSLRILRVRGFF*GILLHEVSTVL
Trigger: AAGCACAGTGGAGACTTCATGCAACAATATTCCCAAAAAGAAGCCTCGAACTCTCAGAATTCTCAGGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTCTTATTATCTTTTATATGCTTGGGAAGTTTGGGTTaGGGCAATGTGGGAGGTGGCAACACACCGGTTTTT +
Preference number: 6 (lower is better)
Translates to: FLLSFICLGSLG*GNVGGGNTPVF
Trigger: AAAAACCGGTGTGTTGCCACCTCCCACATTGCCCAAACCCAAACTTCCCAAGCATATAAAAGATAATAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TGGTTTGCTTTGGGGCAAGTGCAACTGCTCCAAATACTTCTTCTGTaGTGTTTGTTGGGTACTACATTCTTGGTGACTTTGTTTAATTTC +
Preference number: 6 (lower is better)
Translates to: WFALGQVQLLQILLL*CLLGTTFLVTLFNF
Trigger: GAAATTAAACAAAGTCACCAAGAATGTAGTACCCAACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TCTTACATCACCTCTTACGATTTCTTCTTGCTGGACTGTCTTTACTaGATGATATTTTCCAAGGGGATCTTGAATGGCATACAGTGGTGT +
Preference number: 6 (lower is better)
Translates to: SYITSYDFFLLDCLY*MIFSKGILNGIQWC
Trigger: ACACCACTGTATGCCATTCAAGATCCCCTTGGAAAATATCATCAAGTAAAGACAGTCCAGCAAGAAGAAATCGTAAGAGGTGATGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TGGTGTGAATTAGATAGTCTTCTAAGGCTTTTCTCCAGAGCATCATaGTTTTGTTCACGATCTATGACAATCTTTACAGTGCCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: WCELDSLLRLFSRAS*FCSRSMTIFTVPLG
Trigger: CCCCAAAGGCACTGTAAAGATTGTCATAGATCGTGAACAAAACAATGATGCTCTGGAGAAAAGCCTTAGAAGACTATCTAATTCACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp ACTTTGCTTCAGAAACTGGGCCATGCTCAAATTCCCTaGACCATCTGTTTATTTCATTTTCAGGGTCATTCA +
Preference number: 6 (lower is better)
Translates to: TLLQKLGHAQIP*TICLFHFQGHS
Trigger: TGAATGACCCTGAAAATGAAATAAACAGATGGTTCAGGGAATTTGAGCATGGCCCAGTTTCTGAAGCAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp AAACATCTCCAGCTTGTATATCCATTTCAACAGGCTTaGTTTCCTTCACTTCTTCTCCTTGTATGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: KHLQLVYPFQQA*FPSLLLLVCCP
Trigger: TGGACAGCATACAAGGAGAAGAAGTGAAGGAAATCAAGCCTGTTGAAATGGATATACAAGCTGGAGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp CTCTCCTTCTTGTTTCTTAGCTGTCAGTGTTTCATTTaGCTCTGTGTGGAGTTGTTTCAGATAATCCAAAGC +
Preference number: 6 (lower is better)
Translates to: LSFLFLSCQCFI*LCVELFQIIQS
Trigger: GCTTTGGATTATCTGAAACAACTCCACACAGAGTCAAATGAAACACTGACAGCTAAGAAACAAGAAGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp TTGAAATTTGGGGAAATTGGTTTGCTTTGGGGCAAGTaGAACTGCTCCAAATACTTCTTCTGTTGTGTTTGT +
Preference number: 6 (lower is better)
Translates to: LKFGEIGLLWGK*NCSKYFFCCVC
Trigger: ACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp ATTTTCTGGTGGTCATTTCTCAGTTCATATGTCTGTTaGTTTCCAACGGTTTTACCAGCAGATTGGATGGAA +
Preference number: 6 (lower is better)
Translates to: IFWWSFLSSYVC*FPTVLPADWME
Trigger: TTCCATCCAATCTGCTGGTAAAACCGTTGGAAAGCAACAGACATATGAACTGAGAAATGACCACCAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp GACTGCTGTTTCAGAGTCATCTTTTATGGTATCAAGTaGCTGAGTTTCAAAGAGCCAAGTACAAGTTTTGAC +
Preference number: 6 (lower is better)
Translates to: DCCFRVIFYGIK*LSFKEPSTSFD
Trigger: GTCAAAACTTGTACTTGGCTCTTTGAAACTCAGCCACTTGATACCATAAAAGATGACTCTGAAACAGCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp TATGTCTGTTGCTTTCCAACGGTTTTACCAGCAGATTaGATGGAATTAAAGACATCATCCTTCTTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: YVCCFPTVLPAD*MELKTSSFFSS
Trigger: AGAGCTGAAGAAGGATGATGTCTTTAATTCCATCCAATCTGCTGGTAAAACCGTTGGAAAGCAACAGACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GTCTGTGAATCAAGATGTGCATCGATAACCTTTTGCTaGACGACCTTTGGTGCTGATTTATTCTTCAGATGT +
Preference number: 6 (lower is better)
Translates to: VCESRCASITFC*TTFGADLFFRC
Trigger: ACATCTGAAGAATAAATCAGCACCAAAGGTCGTCAAGCAAAAGGTTATCGATGCACATCTTGATTCACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp AATTCATACAAATTTCTTTGCTTGGAATATACATCTTaGGGGACTGGTAGTCTTCTAGGAGGACTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: NSYKFLCLEYTS*GTGSLLGGLGS
Trigger: ACTGCCCAGTCCTCCTAGAAGACTACCAGTCCCCAAAGATGTATATTCCAAGCAAAGAAATTTGTATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GTATCTCAGGAGATGCTTGGTTCATTAGCTTGTATTTaGCCATTCGAACATCCCCTATTTCATCAGCTTCAA +
Preference number: 6 (lower is better)
Translates to: VSQEMLGSLACI*PFEHPLFHQLQ
Trigger: TTGAAGCTGATGAAATAGGGGATGTTCGAATGGCAAAATACAAGCTAATGAACCAAGCATCTCCTGAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp ATATGTCTGTTGCTTTCCAACGGTTTTACCAGCAGATaGGATGGAATTAAAGACATCATCCTTCTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: ICLLLSNGFTSR*DGIKDIILLQL
Trigger: GAGCTGAAGAAGGATGATGTCTTTAATTCCATCCAATCTGCTGGTAAAACCGTTGGAAAGCAACAGACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp AAAGGTTGGGTTTCAAATAACCACTTTGCCTTACTCACCCCACCTTaGACATTTTCTTCCATGGATATTCCTCGGACAACTTTAATTTCT +
Preference number: 6 (lower is better)
Translates to: KGWVSNNHFALLTPP*TFSSMDIPRTTLIS
Trigger: AGAAATTAAAGTTGTCCGAGGAATATCCATGGAAGAAAATGTCAAAGGTGGGGTGAGTAAGGCAAAGTGGTTATTTGAAACCCAACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp GGACTGATTTTCAAATTTATACCTCATGCTGGAAACATCTCCAGCTaGTATATCCATTTCAACAGGCTTGATTTCCTTCACTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GLIFKFIPHAGNISS*YIHFNRLDFLHFFS
Trigger: GGAGAAGAAGTGAAGGAAATCAAGCCTGTTGAAATGGATATACAAGCTGGAGATGTTTCCAGCATGAGGTATAAATTTGAAAATCAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TCTCTAAGATGCTGTTCTCCTGTAGTATCAGTCCAGACACCCGTTTaGTCTCCTGATTCCAAAACATTAGATTTATGGTGTGAATTAGAT +
Preference number: 6 (lower is better)
Translates to: SLRCCSPVVSVQTPV*SPDSKTLDLWCELD
Trigger: ATCTAATTCACACCATAAATCTAATGTTTTGGAATCAGGAGACAAAACGGGTGTCTGGACTGATACTACAGGAGAACAGCATCTTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp TGTGATGAAGAGGTTTTCATCTTCGACTCAACAATTTaGCTCTCAAATGCATCCATGCCTGAGAAATGTTCA +
Preference number: 6 (lower is better)
Translates to: CDEEVFIFDSTI*LSNASMPEKCS
Trigger: TGAACATTTCTCAGGCATGGATGCATTTGAGAGTCAAATTGTTGAGTCGAAGATGAAAACCTCTTCATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp ATGTCAGTTTCACTAACAGTACGTTCAACCAGAGACTaGCTTTTCTTCAGTAACAGTTTTGTACCTTCAACA +
Preference number: 6 (lower is better)
Translates to: MSVSLTVRSTRD*LFFSNSFVPST
Trigger: TGTTGAAGGTACAAAACTGTTACTGAAGAAAAGGCAGTCTCTGGTTGAACGTACTGTTAGTGAAACTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp GTTTTAACTTTGAAATTTGGGGAAATTGGTTTGCTTTaGGGCAAGTGCAACTGCTCCAAATACTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: VLTLKFGEIGLL*GKCNCSKYFFC
Trigger: ACAGAAGAAGTATTTGGAGCAGTTGCACTTGCCCCAAAGCAAACCAATTTCCCCAAATTTCAAAGTTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp AATTGCCTCCTGCTCAGATCTGTTCTGATGTTGATATaGGTATTGAGCAAAGGTATTACGGGAAGAAGTAAT +
Preference number: 6 (lower is better)
Translates to: NCLLLRSVLMLI*VLSKGITGRSN
Trigger: ATTACTTCTTCCCGTAATACCTTTGCTCAATACCAATATCAACATCAGAACAGATCTGAGCAGGAGGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409043.5
ENST00000409195.6
ENST00000409273.6
ENST00000409605.1
ENST00000409728.5
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
ENST00000672716.1
CDS CAA 72 bp CAAGAAGTGGAAGAGGTACTCACAACTGATGATGGCTaGAAAGTCTCTTCATATTCACTTTCAGTCTTAATC +
Preference number: 6 (lower is better)
Translates to: QEVEEVLTTDDG*KVSSYSLSVLI
Trigger: GATTAAGACTGAAAGTGAATATGAAGAGACTTTCAAGCCATCATCAGTTGTGAGTACCTCTTCCACTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp ATTTATGAATGCTTTCATCAAACTGGTCAATGGGCCTaGTTTCAAAAAGCCACCTACAGCTTCTTACATCAC +
Preference number: 6 (lower is better)
Translates to: IYECFHQTGQWA*FQKATYSFLHH
Trigger: GTGATGTAAGAAGCTGTAGGTGGCTTTTTGAAACAAGGCCCATTGACCAGTTTGATGAAAGCATTCATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TCTTTCTGTATCTCAGGAGATGCTTGGTTCATTAGCTaGTATTTTGCCATTCGAACATCCCCTATTTCATCA +
Preference number: 6 (lower is better)
Translates to: SFCISGDAWFIS*YFAIRTSPISS
Trigger: TGATGAAATAGGGGATGTTCGAATGGCAAAATACAAGCTAATGAACCAAGCATCTCCTGAGATACAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp ACCTTGTATATGGTCAATACTGGGCATAATATTATGTaGTTCTTCAGAAATCTGATCCAGTGGCTGAGTTTC +
Preference number: 6 (lower is better)
Translates to: TLYMVNTGHNIM*FFRNLIQWLSF
Trigger: GAAACTCAGCCACTGGATCAGATTTCTGAAGAATCACATAATATTATGCCCAGTATTGACCATATACAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp ATAATCTCTTCTTTGGGTATCTTACCAAATGTACTCTaGGGCTCGGTCATAAAAACCTTAACTGTGTTATGC +
Preference number: 6 (lower is better)
Translates to: IISSLGILPNVL*GSVIKTLTVLC
Trigger: GCATAACACAGTTAAGGTTTTTATGACCGAGCCTCAGAGTACATTTGGTAAGATACCCAAAGAAGAGATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS GCA 72 bp TCTGCTTCAAACTGTTTCACTCTCGACAAAATCTGTTaGAGTTCTTCACGTTTTCTCAAGAATTCCACTATA +
Preference number: 6 (lower is better)
Translates to: SASNCFTLDKIC*SSSRFLKNSTI
Trigger: TATAGTGGAATTCTTGAGAAAACGTGAAGAACTGCAACAGATTTTGTCGAGAGTGAAACAGTTTGAAGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CCA 72 bp TCTTTACTTGATGATATTTTCCAAGGGGATCTTGAATaGCATACAGTGGTGTTGTCTCGAAGAGAGATTTAT +
Preference number: 6 (lower is better)
Translates to: SLLDDIFQGDLE*HTVVLSRREIY
Trigger: ATAAATCTCTCTTCGAGACAACACCACTGTATGCCATTCAAGATCCCCTTGGAAAATATCATCAAGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GTGCAACTGCTCCAAATACTTCTTCTGTTGTGTTTGTaGGGTACTACATTCTTGGTGACTTTGTTTAATTTC +
Preference number: 6 (lower is better)
Translates to: VQLLQILLLLCL*GTTFLVTLFNF
Trigger: GAAATTAAACAAAGTCACCAAGAATGTAGTACCCAACAAACACAACAGAAGAAGTATTTGGAGCAGTTGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTCAAATTTATACCTCATGCTGGAAACATCTCCAGCTaGTATATCCATTTCAACAGGCTTGATTTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: FKFIPHAGNISS*YIHFNRLDFLH
Trigger: GTGAAGGAAATCAAGCCTGTTGAAATGGATATACAAGCTGGAGATGTTTCCAGCATGAGGTATAAATTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TTTCCATCATCCCGCTGGGATTCTTTCACAGAGGAAAAGAAAGATTaGTTCTGTGTAATCTCTTGCTTTGAATCTTTAGTATTAGAGAAG +
Preference number: 6 (lower is better)
Translates to: FPSSRWDSFTEEKKD*FCVISCFESLVLEK
Trigger: CTTCTCTAATACTAAAGATTCAAAGCAAGAGATTACACAGAACAAATCTTTCTTTTCCTCTGTGAAAGAATCCCAGCGGGATGATGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp TTATTTGAAATTTATGAATGCTTTCATCAAACTGGTCAATGGGCCTaGTTTCAAAAAGCCACCTACAGCTTCTTACATCACCTCTTACGA +
Preference number: 6 (lower is better)
Translates to: LFEIYECFHQTGQWA*FQKATYSFLHHLLR
Trigger: TCGTAAGAGGTGATGTAAGAAGCTGTAGGTGGCTTTTTGAAACAAGGCCCATTGACCAGTTTGATGAAAGCATTCATAAATTTCAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 90 bp ATAATTTCTTCTTTCTGTATCTCAGGAGATGCTTGGTTCATTAGCTaGTATTTTGCCATTCGAACATCCCCTATTTCATCAGCTTCAATG +
Preference number: 6 (lower is better)
Translates to: IISSFCISGDAWFIS*YFAIRTSPISSASM
Trigger: CATTGAAGCTGATGAAATAGGGGATGTTCGAATGGCAAAATACAAGCTAATGAACCAAGCATCTCCTGAGATACAGAAAGAAGAAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GTGTGGGTTTCAAATAGCCAAGTAGATGTTTTAACATaGCCCTTTTGTATTTCATTGACACTTACTGTTCGT +
Preference number: 6 (lower is better)
Translates to: VWVSNSQVDVLT*PFCISLTLTVR
Trigger: ACGAACAGTAAGTGTCAATGAAATACAAAAGGGCAATGTTAAAACATCTACTTGGCTATTTGAAACCCACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp GATTCTTTCCATCGATGGCTTGATTCTTTAAGTGACTaGAGTGTGGCTAGCATGTTACCTTTTATAATTTCT +
Preference number: 6 (lower is better)
Translates to: DSFHRWLDSLSD*SVASMLPFIIS
Trigger: AGAAATTATAAAAGGTAACATGCTAGCCACACTCAAGTCACTTAAAGAATCAAGCCATCGATGGAAAGAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTAGATAGTCTTCTAAGGCTTTTCTCCAGAGCATCATaGTTTTGTTCACGATCTATGACAATCTTTACAGTG +
Preference number: 6 (lower is better)
Translates to: LDSLLRLFSRAS*FCSRSMTIFTV
Trigger: CACTGTAAAGATTGTCATAGATCGTGAACAAAACAATGATGCTCTGGAGAAAAGCCTTAGAAGACTATCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS TCA 72 bp TTTATTATTGCTGACATGAACATTAGATACTTTGGATaGTGTTTCATCAAGACTAGTGGGTTTATTTCCCGG +
Preference number: 6 (lower is better)
Translates to: FIIADMNIRYFG*CFIKTSGFISR
Trigger: CCGGGAAATAAACCCACTAGTCTTGATGAAACATCATCCAAAGTATCTAATGTTCATGTCAGCAATAATAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TCCAAATTCCTCCTTACAAAATGTACGACTTTCTTGTaGTATGTTATGGTTTGTTTCTCCCTTTGCATAAAC +
Preference number: 6 (lower is better)
Translates to: SKFLLTKCTTFL*YVMVCFSLCIN
Trigger: GTTTATGCAAAGGGAGAAACAAACCATAACATACAACAAGAAAGTCGTACATTTTGTAAGGAGGAATTTGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295237.10
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1
CDS CAA 72 bp TTTTCAGACTCAAAGAATTGTCTACTTGTCTTTACATaGCCACCTTGTATATGGTCAATACTGGGCATAATA +
Preference number: 6 (lower is better)
Translates to: FSDSKNCLLVFT*PPCIWSILGII
Trigger: TATTATGCCCAGTATTGACCATATACAAGGTGGCAATGTAAAGACAAGTAGACAATTCTTTGAGTCTGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409195.6
ENST00000409273.6
ENST00000628543.2
ENST00000672277.1
ENST00000672671.1