RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XIRP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168334

Ensembl transcript IDs: ENST00000340369.4, ENST00000396251.1, ENST00000421646.1

Found 1093 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCCTCCCAGCTGGGGCACGGCCTCAAAGAGCCTCCGCAGGGCCTaGACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGCTTGCACC +
Preference number: 1 (lower is better)
Translates to: APPSWGTASKSLRRA*TSTLLAASFSRACT
Trigger: GGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTTTGAGGCCGTGCCCCAGCTGGGAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 90 bp GGGGCACGGCCTCAAAGAGCCTCCGCAGGGCCTGCACGTCCACACTaGTTGCGGCCTCCTTCTCCAGGGCTTGCACCTGGTTCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: GARPQRASAGPARPH*LRPPSPGLAPGSGG
Trigger: GCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTTTGAGGCCGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 90 bp CACGGCCTCAAAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTaGGGCCTCCTTCTCCAGGGCTTGCACCTGGTTCAGGAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: HGLKEPPQGLHVHTA*GLLLQGLHLVQEAL
Trigger: CAGGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTTTGAGGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 90 bp ACCGTCTCAGCTTCTGTCAGGTCACTGCTGAACCCAGCTGGGCTGTaGAGGAACTGCCTCAGCAAGGGGGAGGCGTGGAGCCCGAGGTGG +
Preference number: 1 (lower is better)
Translates to: TVSASVRSLLNPAGL*RNCLSKGEAWSPRW
Trigger: CCACCTCGGGCTCCACGCCTCCCCCTTGCTGAGGCAGTTCCTGCACAGCCCAGCTGGGTTCAGCAGTGACCTGACAGAAGCTGAGACGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp GTGGGCCTGGGGGCCGTGGTGCTGAGGCCATGTTGTAAGCTGGGCTaGCTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: VGLGAVVLRPCCKLG*LCPLGHLARGMWPW
Trigger: CCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAGCCAGCCCAGCTTACAACATGGCCTCAGCACCACGGCCCCCAGGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp CACCTGCACCGTCTCAGCTTCTGTCAGGTCACTGCTGAACCCAGCTaGGCTGTGCAGGAACTGCCTCAGCAAGGGGGAGGCGTGGAGCCC +
Preference number: 1 (lower is better)
Translates to: HLHRLSFCQVTAEPS*AVQELPQQGGGVEP
Trigger: GGGCTCCACGCCTCCCCCTTGCTGAGGCAGTTCCTGCACAGCCCAGCTGGGTTCAGCAGTGACCTGACAGAAGCTGAGACGGTGCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 90 bp AGCTGCAGGACACCTGCACCGTCTCAGCTTCTGTCAGGTCACTGCTaGACCCAGCTGGGCTGTGCAGGAACTGCCTCAGCAAGGGGGAGG +
Preference number: 1 (lower is better)
Translates to: SCRTPAPSQLLSGHC*TQLGCAGTASARGR
Trigger: CCTCCCCCTTGCTGAGGCAGTTCCTGCACAGCCCAGCTGGGTTCAGCAGTGACCTGACAGAAGCTGAGACGGTGCAGGTGTCCTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 90 bp GCAGCCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTaGCCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCTCGG +
Preference number: 1 (lower is better)
Translates to: AALPRSVPSVEQLPC*PVSAPQRPAPLRPR
Trigger: CCGAGGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 90 bp AGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGCTTaGACCTGGTTCAGGAGGCCCTGGAGCTCTTTCTGGTTTCTTTGC +
Preference number: 1 (lower is better)
Translates to: RACTSTLLAASFSRA*TWFRRPWSSFWFLC
Trigger: GCAAAGAAACCAGAAAGAGCTCCAGGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 90 bp GCCTCAGTGTGGCATTCAACCTTGGCTTGGTTCTTGACTGCAGTTTaGCCTCCGACCTCCTGGCCTGAGCCACTGGGCCTGGCGCTACTG +
Preference number: 1 (lower is better)
Translates to: ASVWHSTLAWFLTAV*PPTSWPEPLGLALL
Trigger: CAGTAGCGCCAGGCCCAGTGGCTCAGGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAGGTTGAATGCCACACTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp TCTCACCTCGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTaGGAGATAGAGGCAAGGGCTTGGGCAGCCTCTGAGGAGGGTGGC +
Preference number: 1 (lower is better)
Translates to: SHLVGVLFAPPPRKS*EIEARAWAASEEGG
Trigger: GCCACCCTCCTCAGAGGCTGCCCAAGCCCTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACGAGGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 90 bp CTTGACTCTGGGCCTCAGTGTGGCATTCAACCTTGGCTTGGTTCTTaGCTGCAGTTTGACCTCCGACCTCCTGGCCTGAGCCACTGGGCC +
Preference number: 1 (lower is better)
Translates to: LDSGPQCGIQPWLGS*LQFDLRPPGLSHWA
Trigger: GGCCCAGTGGCTCAGGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAGGTTGAATGCCACACTGAGGCCCAGAGTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 90 bp GCACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTaGACAGCCTCTTCAATGTCCAGCAGCCTTGCCAAGGTCTGTTCC +
Preference number: 1 (lower is better)
Translates to: ALASGWRLDMELSAL*TASSMSSSLAKVCS
Trigger: GGAACAGACCTTGGCAAGGCTGCTGGACATTGAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp TGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGCTTGCACCTaGTTCAGGAGGCCCTGGAGCTCTTTCTGGTTTCTTTGCAGACTG +
Preference number: 1 (lower is better)
Translates to: CTSTLLAASFSRACT*FRRPWSSFWFLCRL
Trigger: CAGTCTGCAAAGAAACCAGAAAGAGCTCCAGGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp GGCCTGGCGCTACTGCTGACTGTGACACTGATCTTGTGGGCACTGTaGTCTTTTGGAGGTCCCTGGAAATGGCCTCTGGCACTGGCCTCA +
Preference number: 1 (lower is better)
Translates to: GLALLLTVTLILWAL*SFGGPWKWPLALAS
Trigger: TGAGGCCAGTGCCAGAGGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCCACAAGATCAGTGTCACAGTCAGCAGTAGCGCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 90 bp GGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTaGTTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCC +
Preference number: 1 (lower is better)
Translates to: GDEGAGGQVLLETSQ*FQTETNAVSSWLCS
Trigger: GGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR TCA 90 bp GCCTCTTCAATGTCCAGCAGCCTTGCCAAGGTCTGTTCCTTCAGTTaGGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: ASSMSSSLAKVCSFS*ATSVLTRVSSPKAC
Trigger: GCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTGAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 90 bp CTTGGCTTGGTTCTTGACTGCAGTTTGACCTCCGACCTCCTGGCCTaGGCCACTGGGCCTGGCGCTACTGCTGACTGTGACACTGATCTT +
Preference number: 1 (lower is better)
Translates to: LGLVLDCSLTSDLLA*ATGPGATADCDTDL
Trigger: AAGATCAGTGTCACAGTCAGCAGTAGCGCCAGGCCCAGTGGCTCAGGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp TCTTTTGGAGGTCCCTGGAAATGGCCTCTGGCACTGGCCTCAGGCTaGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCTTCA +
Preference number: 1 (lower is better)
Translates to: SFGGPWKWPLALASG*RLDMELSALCTASS
Trigger: TGAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGTGCCAGAGGCCATTTCCAGGGACCTCCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp ACACTGATCTTGTGGGCACTGTGGTCTTTTGGAGGTCCCTGGAAATaGCCTCTGGCACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTG +
Preference number: 1 (lower is better)
Translates to: TLILWALWSFGGPWK*PLALASGWRLDMEL
Trigger: CAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGTGCCAGAGGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCCACAAGATCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp CCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTaGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTGAT +
Preference number: 1 (lower is better)
Translates to: PEEGTNTLLMSPASW*KGQLRLCDLWPLCD
Trigger: ATCACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp GGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGGGAACCTTGGCTaGCTGAGGGATGGCTGTATCTCTCTCACCTCGTTGGTGTTCTCT +
Preference number: 1 (lower is better)
Translates to: GQRYVALVYSSGNLG*LRDGCISLTSLVFS
Trigger: AGAGAACACCAACGAGGTGAGAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACTACTGTAGACCAGGGCCACATACCTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp AAACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTaGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGT +
Preference number: 1 (lower is better)
Translates to: KPEEGTNTLLMSPAS*WKGQLRLCDLWPLC
Trigger: ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 90 bp TCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATaGCTCCATAGTGTTGTGAGCTCCCTGGCCCCGTCTGTAGCTCCA +
Preference number: 1 (lower is better)
Translates to: SQTGPPPHTVQSRFS*LHSVVSSLAPSVAP
Trigger: TGGAGCTACAGACGGGGCCAGGGAGCTCACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 90 bp AGAGGTATGTGGCCCTGGTCTACAGTAGTGGGAACCTTGGCTGGCTaGGGGATGGCTGTATCTCTCTCACCTCGTTGGTGTTCTCTTTGC +
Preference number: 1 (lower is better)
Translates to: RGMWPWSTVVGTLAG*GMAVSLSPRWCSLC
Trigger: GCAAAGAGAACACCAACGAGGTGAGAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACTACTGTAGACCAGGGCCACATACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 90 bp ATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTaGTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCA +
Preference number: 1 (lower is better)
Translates to: MAHSNPLKMPFPLGP*SSVQEAGTHFSPGA
Trigger: TGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR TCA 90 bp CATGGGGACAGAGAAAGGCAGTGCATTTGGCTTCTAGGGACATGCTaGTTGCTGACTCTTTGGGTGACCTTTGGGCCACCAGATGACCAG +
Preference number: 1 (lower is better)
Translates to: HGDRERQCIWLLGTC*LLTLWVTFGPPDDQ
Trigger: CTGGTCATCTGGTGGCCCAAAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTTTCTCTGTCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CCA 90 bp TGCTCGGTGACTGTGGTGGAAGACATGAGGACTGTGTTCCCAAACTaGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCA +
Preference number: 1 (lower is better)
Translates to: CSVTVVEDMRTVFPN*STSSYCSVTVLMAP
Trigger: TGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCCTCATGTCTTCCACCACAGTCACCGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATaGGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTGTATAT +
Preference number: 1 (lower is better)
Translates to: GGSNSGSGVQIHTCR*VGQACVKNMCVSVY
Trigger: ATATACAGACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR TCA 90 bp CCTATTGAAAGAACTGCGAAAGGGAAATGGCCCACAGTAATCCTCTaGAGATGCCATTTCCTCTTGGTCCTTGCTCCAGTGTACAGGAGG +
Preference number: 1 (lower is better)
Translates to: PIERTAKGKWPTVIL*RCHFLLVLAPVYRR
Trigger: CCTCCTGTACACTGGAGCAAGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTCGCAGTTCTTTCAATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR TCA 90 bp CCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTaGAAGAACTGCGAAAGGGAAATGGCCCACAGTAATCCTCTGAAG +
Preference number: 1 (lower is better)
Translates to: PLPDLSFSIWKNWAY*KNCEREMAHSNPLK
Trigger: CTTCAGAGGATTACTGTGGGCCATTTCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CCA 90 bp CTCAGACTAATTAAAGAAATAAAAACTCTGGGTAGAGGGACACTCTaGGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTC +
Preference number: 1 (lower is better)
Translates to: LRLIKEIKTLGRGTL*GAPIQAVVCKFTHV
Trigger: GACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCCCAGAGTGTCCCTCTACCCAGAGTTTTTATTTCTTTAATTAGTCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CCA 90 bp CTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATaGCTGGGAACACTCAGACTAATTAAAGAAATAAAAACTCTGGGT +
Preference number: 1 (lower is better)
Translates to: LCPVGSVPLQGLRSR*LGTLRLIKEIKTLG
Trigger: ACCCAGAGTTTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CAA 90 bp GCACGGCCTCAAAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTaGCGGCCTCCTTCTCCAGGGCTTGCACCTGGTTCAGGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: ARPQRASAGPARPHC*RPPSPGLAPGSGGP
Trigger: AGGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTTTGAGGCCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR TCA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCTGGGCAGCAGGAGCCTaGGGAGCAGCCCCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFWAAGA*GAAPPS
Trigger: GCTGGGAGGGGCTGCTCCTCAGGCTCCTGCTGCCCA...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGTCCTCCACAAGCAGCTaGGAGCCCCCATCCTACCCC +
Preference number: 2 (lower is better)
Translates to: KSLRRACTSTLLAASFSRSSTSS*EPPSYP
Trigger: GGGGTAGGATGGGGGCTCCCAGCTGCTTGTGGAGGA...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCCCCGAGGTGGGAGCCTaGGTTCCTGGGTGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFPEVGA*VPGWLC
Trigger: GCAGAGCCACCCAGGAACCCAGGCTCCCACCTCGGG...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCCTCTCAGGGGCCCCTTaGTGGGAACCTTCCATGGGC +
Preference number: 2 (lower is better)
Translates to: ATSVLTRVSSPKACSTEALSGAP*WEPSMG
Trigger: GCCCATGGAAGGTTCCCACCAAGGGGCCCCTGAGAG...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CAA 90 bp CAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGCTaGCACCTGGTTCAGGAGGCCCTGGAGCTCTTTCTGGTTTCTTTG +
Preference number: 2 (lower is better)
Translates to: QGLHVHTACGLLLQG*HLVQEALELFLVSL
Trigger: CAAAGAAACCAGAAAGAGCTCCAGGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCTCCTTCTCCAGGGCTTaGACCTGGTTCAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: TGLRLEARHGAECLVHSLSFSRA*TWFRRP
Trigger: GGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGA...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCCTGCGGCTTCTTCTTTaGGGGCATGGTGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: TGLRLEARHGAECLVHSLLRLLL*GHGGVQ
Trigger: CTGGACCCCACCATGCCCCCAAAGAAGAAGCCGCAG...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGAACCTTCCATGGGCTaGTCTCCTGAGGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLEPSMG*SPEGPG
Trigger: CCCCGGCCCCTCAGGAGAGCAGCCCATGGAAGGTTC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATCCTCCACAAGCAGCTaGGAGCCCCCATCCTACCCC +
Preference number: 2 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRSSTSS*EPPSYP
Trigger: GGGGTAGGATGGGGGCTCCCAGCTGCTTGTGGAGGA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CAA 90 bp CTGGCACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTaGTGCACAGCCTCTTCAATGTCCAGCAGCCTTGCCAAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: LALASGWRLDMELSA*CTASSMSSSLAKVC
Trigger: ACAGACCTTGGCAAGGCTGCTGGACATTGAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGTGCCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CAA 90 bp CCTGAGCCACTGGGCCTGGCGCTACTGCTGACTGTGACACTGATCTaGTGGGCACTGTGGTCTTTTGGAGGTCCCTGGAAATGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PEPLGLALLLTVTLI*WALWSFGGPWKWPL
Trigger: CAGAGGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCCACAAGATCAGTGTCACAGTCAGCAGTAGCGCCAGGCCCAGTGGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCTACCCCCACGCCTGTaGAACTCTGTGGGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGLPPRL*NSVGLF
Trigger: GAAGAGGCCCACAGAGTTGCACAGGCGTGGGGGTAG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAGGGGCTCAGAGGCTTaGTGGATGGAGTCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSRGSEA*WMESSA
Trigger: TGCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCT...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGTTCCTGGGTGGCTCTaGCTGCTCGGTGACTGTGGT +
Preference number: 2 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGVPGWL*LLGDCG
Trigger: ACCACAGTCACCGAGCAGGCAGAGCCACCCAGGAAC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCTACCCACTTCAGTCCTaGGGCAGTGGAGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSYPLQS*GSGGQE
Trigger: TTCCTGGCCTCCACTGCCCCAGGACTGAAGTGGGTA...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGGAACCTTGGCTGGCTaGGGGATGGCTGTATCTCTC +
Preference number: 2 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGGTLAG*GMAVSL
Trigger: GAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCTTTCCTCTTGGTCCTTaGTCCAGTGTACAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFFPLGP*SSVQEA
Trigger: TGCCTCCTGTACACTGGAGCAAGGACCAAGAGGAAA...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGGGTTTAGGGGGCAGCTaGGGCTTCTTCTTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKGLGGS*GFFFGG
Trigger: GCCCCCAAAGAAGAAGCCGCAGCTGCCCCCTAAACC...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCTACCCACTTCAGTCCTaGGGCAGTGGAGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGYPLQS*GSGGQE
Trigger: TTCCTGGCCTCCACTGCCCCAGGACTGAAGTGGGTA...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CAA 90 bp AGCCTCTTCAATGTCCAGCAGCCTTGCCAAGGTCTGTTCCTTCAGTaGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SLFNVQQPCQGLFLQ*SNFRADPCQLPKGL
Trigger: CAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTGAAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCTACCCCCACGCCTGTaGAACTCTGTGGGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMLPPRL*NSVGLF
Trigger: GAAGAGGCCCACAGAGTTGCACAGGCGTGGGGGTAG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGAGCCTCCGCAGGGCCTaGACGTCCACACTGCTTGCG +
Preference number: 2 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMSLRRA*TSTLLA
Trigger: CGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCT...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCCTCCAGGGGTTCTCTaGCCAGCAGGGCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAPPGVL*PAGLLW
Trigger: CCACAGCAGCCCTGCTGGCCAGAGAACCCCTGGAGG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGCTGGCTATGTCCACTaGGACATCTGGCCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRAGYVH*DIWPEV
Trigger: TACCTCTGGCCAGATGTCCCAGTGGACATAGCCAGC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR TCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGTGGGGTCTTTGTCTGTaGCCCTCCAGGGGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMWGLCL*PSRGSL
Trigger: CAGAGAACCCCTGGAGGGTCACAGACAAAGACCCCA...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR TCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGAGCAACTTCCGTGCTaGCCCGTGTCAGCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQEQLPC*PVSAPQ
Trigger: TTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR TCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACCCTTGGCTTGGTTCTTaGCTGCAGTTTGACCTCCGA +
Preference number: 2 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYPWLGS*LQFDLR
Trigger: TCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAGG...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATCTGGCCAGCAGGGCTaGTGTGGGAGTGAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSSGQQG*CGSEEG
Trigger: CCCTTCTTCACTCCCACAGCAGCCCTGCTGGCCAGA...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTTACCCACTTCAGTCCTaGGGCAGTGGAGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTYPLQS*GSGGQE
Trigger: TTCCTGGCCTCCACTGCCCCAGGACTGAAGTGGGTA...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGGTAGAGGGACACTCTaGGGGGCTCCAATTCAGGCA +
Preference number: 2 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGGRGTL*GAPIQA
Trigger: TGCCTGAATTGGAGCCCCCCAGAGTGTCCCTCTACC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGAGTCCTCAGCACGGTaGGCTCCAGCTGGAAAGTCA +
Preference number: 2 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMESSAR*APAGKS
Trigger: TGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTC...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CAA 90 bp AATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTaGATGTCTCCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: NLGWKVKPEEGTNTL*MSPASWWKGQLRLC
Trigger: ACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCAGAGGCTTGCTGGATaGAGTCCTCAGCACGGTGGG +
Preference number: 2 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVQRLAG*SPQHGG
Trigger: CCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGAGTGGGAACCTTGGCTaGCTGAGGGATGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMSGNLG*LRDGCI
Trigger: GATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACT...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTGGCCAGAGGTATGTaGCCCTGGTCTACAGTAGTG +
Preference number: 2 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTLARGM*PWSTVV
Trigger: CACTACTGTAGACCAGGGCCACATACCTCTGGCCAG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTGTTGTAAGCTGGGCTaGCTATGTCCACTGGGACAT +
Preference number: 2 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYCCKLG*LCPLGH
Trigger: ATGTCCCAGTGGACATAGCCAGCCCAGCTTACAACA...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CAA 90 bp GTGCAGAGTGGGGGACAGTCATGGGGACAGAGAAAGGCAGTGCATTaGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTT +
Preference number: 2 (lower is better)
Translates to: VQSGGQSWGQRKAVH*ASRDMLIADSLGDL
Trigger: AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTTTCTCTGTCCCCATGACTGTCCCCCACTCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCGTTGGTGTTCTCTTTaGCCCACCTCCGAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMRWCSL*PTSEEK
Trigger: CTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGGTAGAGGGACACTCTaGGGGGCTCCAATTCAGGCA +
Preference number: 2 (lower is better)
Translates to: AVHLASRDMLIADSLGDLGRGTL*GAPIQA
Trigger: TGCCTGAATTGGAGCCCCCCAGAGTGTCCCTCTACC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAGGATTAAGGAGCAGATaGCTGGGAACACTCAGACTA +
Preference number: 2 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRGLRSR*LGTLRL
Trigger: TAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCC...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGTTTCCTCTTGGTCCTTaGTCCAGTGTACAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMFPLGP*SSVQEA
Trigger: TGCCTCCTGTACACTGGAGCAAGGACCAAGAGGAAA...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCTTTATTCAGACCGTATaGTTCCCATTTGGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGFIQTV*FPFGVQ
Trigger: CTGCACCCCAAATGGGAAGCATACGGTCTGAATAAA...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGCTTGGTTCTTGACTaGAGTTTGACCTCCGACCTC +
Preference number: 2 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQGLVLD*SLTSDL
Trigger: GAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTAGAGGTATGTGGCCCTaGTCTACAGTAGTGGGAACC +
Preference number: 2 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMARGMWP*STVVGT
Trigger: GGTTCCCACTACTGTAGACCAGGGCCACATACCTCT...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAATTCAGGCAGTGGTGTaGAAATTCACACATGTCGAT +
Preference number: 2 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRIQAVV*KFTHVD
Trigger: ATCGACATGTGTGAATTTGCACACCACTGCCTGAAT...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp CCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGTCTTTCTGGTTTCTTTaGAGACTGTCAGGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: PCQGLFLQLSNFRADPCQSFWFL*RLSGLS
Trigger: TGAGAGCCCTGACAGTCTGCAAAGAAACCAGAAAGA...CTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCATAGTGTTGTGTGGTTCAGGAGGCCCTaGAGCTCTTTCTGGTTTCTT +
Preference number: 2 (lower is better)
Translates to: GPPPHTVQSRFSWLHSVVWFRRP*SSFWFL
Trigger: AAGAAACCAGAAAGAGCTCCAGGGCCTCCTGAACCA...CACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATTCACACATGTCGATaGGTGGGCCAGGCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEIHTCR*VGQACV
Trigger: CACACAGGCCTGGCCCACGCATCGACATGTGTGAAT...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCCCTGGAGCTCTTTCTaGTTTCTTTGCAGACTGTCA +
Preference number: 2 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQPWSSF*FLCRLS
Trigger: TGACAGTCTGCAAAGAAACCAGAAAGAGCTCCAGGG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATTCCTTGTGGCCGACTaGATGGAGATAAATGTTGGG +
Preference number: 2 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSFLVAD*MEINVG
Trigger: CCCAACATTTATCTCCATCCAGTCGGCCACAAGGAA...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR TCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCAAGAACTGGGCCTATTaGAAGAACTGCGAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVKNWAY*KNCERE
Trigger: TTCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGATTCAGGCAGTGGTGTaGAAATTCACACATGTCGAT +
Preference number: 2 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQIQAVV*KFTHVD
Trigger: ATCGACATGTGTGAATTTGCACACCACTGCCTGAAT...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACCTCCGAGGAAAAGCTaGGAGATAGAGGCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKPPRKS*EIEARA
Trigger: AGCCCTTGCCTCTATCTCCCAGCTTTTCCTCGGAGG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp CAGCAAGGGGGAGGCGTGGAGCCCGAGGTGGGAGCCTaGGTTCCTGGGTGGCTCTGCCTGCTCGGTGACTGT +
Preference number: 3 (lower is better)
Translates to: QQGGGVEPEVGA*VPGWLCLLGDC
Trigger: ACAGTCACCGAGCAGGCAGAGCCACCCAGGAACCCAGGCTCCCACCTCGGGCTCCACGCCTCCCCCTTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 72 bp AGCTGGGGCACGGCCTCAAAGAGCCTCCGCAGGGCCTaGACGTCCACACTGCTTGCGGCCTCCTTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: SWGTASKSLRRA*TSTLLAASFSR
Trigger: CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTTTGAGGCCGTGCCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 72 bp GCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTaGGGCCTCGGGCTTTTGGTGGGCAGCAGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: ADPCQLPKGLLH*GLGLLVGSRSL
Trigger: CAGGCTCCTGCTGCCCACCAAAAGCCCGAGGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 72 bp CCTCAAAGAGCCTCCGCAGGGCCTGCACGTCCACACTaGTTGCGGCCTCCTTCTCCAGGGCTTGCACCTGGT +
Preference number: 3 (lower is better)
Translates to: PQRASAGPARPH*LRPPSPGLAPG
Trigger: ACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTTTGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp CGTCTCAGCTTCTGTCAGGTCACTGCTGAACCCAGCTaGGCTGTGCAGGAACTGCCTCAGCAAGGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: RLSFCQVTAEPS*AVQELPQQGGG
Trigger: GCCTCCCCCTTGCTGAGGCAGTTCCTGCACAGCCCAGCTGGGTTCAGCAGTGACCTGACAGAAGCTGAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp GGGGCCGTGGTGCTGAGGCCATGTTGTAAGCTGGGCTaGCTATGTCCACTGGGACATCTGGCCAGAGGTATG +
Preference number: 3 (lower is better)
Translates to: GAVVLRPCCKLG*LCPLGHLARGM
Trigger: CATACCTCTGGCCAGATGTCCCAGTGGACATAGCCAGCCCAGCTTACAACATGGCCTCAGCACCACGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGCTCTTTCTGGTTTCTTaGCAGACTGTCAGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: KSLRRACTSTLLAASFSRLFLVS*QTVRAL
Trigger: GAGAGCCCTGACAGTCTGCAAAGAAACCAGAAAGAG...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 72 bp GGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTaGTTCCAAACAGAGACCAACGCTGTGTCCAGTTGG +
Preference number: 3 (lower is better)
Translates to: GAGGQVLLETSQ*FQTETNAVSSW
Trigger: CCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CAA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCCAATGTCCAGCAGCCTaGCCAAGGTCTGTTCCTTCA +
Preference number: 3 (lower is better)
Translates to: TGLRLEARHGAECLVHSLQCPAA*PRSVPS
Trigger: TGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTG...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 72 bp CCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTaGCCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTG +
Preference number: 3 (lower is better)
Translates to: PRSVPSVEQLPC*PVSAPQRPAPL
Trigger: CAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 72 bp GGGCCTCAGTGTGGCATTCAACCTTGGCTTGGTTCTTaGCTGCAGTTTGACCTCCGACCTCCTGGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: GPQCGIQPWLGS*LQFDLRPPGLS
Trigger: GCTCAGGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAGGTTGAATGCCACACTGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp TGGCTATGTCCACTGGGACATCTGGCCAGAGGTATGTaGCCCTGGTCTACAGTAGTGGGAACCTTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: WLCPLGHLARGM*PWSTVVGTLAG
Trigger: GCCAGCCAAGGTTCCCACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCCAGGGGCTCAGAGGCTaGCTGGATGGAGTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLQGLRG*LDGVLS
Trigger: GCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCTG...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGGCACGTCCACACTGCTaGCGGCCTCCTTCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMARPHC*RPPSPG
Trigger: CCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGC...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGGGCACTGTGGTCTTTaGGAGGTCCCTGGAAATGGC +
Preference number: 3 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLGHCGL*EVPGNG
Trigger: GCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR TCA 72 bp TGGCCCTGGTCTACAGTAGTGGGAACCTTGGCTGGCTaGGGGATGGCTGTATCTCTCTCACCTCGTTGGTGT +
Preference number: 3 (lower is better)
Translates to: WPWSTVVGTLAG*GMAVSLSPRWC
Trigger: ACACCAACGAGGTGAGAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACTACTGTAGACCAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 72 bp TCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTaGACAGCCTCTTCAATGTCCAGCAGCCTTGCCAAG +
Preference number: 3 (lower is better)
Translates to: SGWRLDMELSAL*TASSMSSSLAK
Trigger: CTTGGCAAGGCTGCTGGACATTGAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp GACTGTGACACTGATCTTGTGGGCACTGTGGTCTTTTaGAGGTCCCTGGAAATGGCCTCTGGCACTGGCCTC +
Preference number: 3 (lower is better)
Translates to: DCDTDLVGTVVF*RSLEMASGTGL
Trigger: GAGGCCAGTGCCAGAGGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCCACAAGATCAGTGTCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp GGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTaGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCT +
Preference number: 3 (lower is better)
Translates to: GTNTLLMSPASW*KGQLRLCDLWP
Trigger: AGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp GAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTaGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGG +
Preference number: 3 (lower is better)
Translates to: EGTNTLLMSPAS*WKGQLRLCDLW
Trigger: CCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATaGCTCCATAGTGTTGTGAGCTCCCTGGCCCCGTCT +
Preference number: 3 (lower is better)
Translates to: GPPPHTVQSRFS*LHSVVSSLAPS
Trigger: AGACGGGGCCAGGGAGCTCACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCTCCAGAACACTCTTTaGCCACCCTCTGGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMALQNTL*PPSGQG
Trigger: CCCCTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGAG...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp TATGTGGCCCTGGTCTACAGTAGTGGGAACCTTGGCTaGCTGAGGGATGGCTGTATCTCTCTCACCTCGTTG +
Preference number: 3 (lower is better)
Translates to: YVALVYSSGNLG*LRDGCISLTSL
Trigger: CAACGAGGTGAGAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACTACTGTAGACCAGGGCCACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAGATGCCATTTCCTCTaGGTCCTTGCTCCAGTGTAC +
Preference number: 3 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGRCHFL*VLAPVY
Trigger: GTACACTGGAGCAAGGACCAAGAGGAAATGGCATCT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CAA 90 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCATAGTGTTGTGGAGGTGGGATCATGGTaGAGGGCATTGAGCTTGGGG +
Preference number: 3 (lower is better)
Translates to: GPPPHTVQSRFSWLHSVVEVGSW*RALSLG
Trigger: CCCCAAGCTCAATGCCCTCAACCATGATCCCACCTC...CACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 72 bp ATGGCTGTATCTCTCTCACCTCGTTGGTGTTCTCTTTaGCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGC +
Preference number: 3 (lower is better)
Translates to: MAVSLSPRWCSL*PTSEEKLGDRG
Trigger: GCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACGAGGTGAGAGAGATACAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp TGTGTGTCTGTATATATTACATCCTCCACAAGCAGCTaGGAGCCCCCATCCTACCCCCACGCCTGTGCAACT +
Preference number: 3 (lower is better)
Translates to: CVSVYITSSTSS*EPPSYPHACAT
Trigger: AGTTGCACAGGCGTGGGGGTAGGATGGGGGCTCCCAGCTGCTTGTGGAGGATGTAATATATACAGACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CCA 72 bp CTACTGCTGACTGTGACACTGATCTTGTGGGCACTGTaGTCTTTTGGAGGTCCCTGGAAATGGCCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: LLLTVTLILWAL*SFGGPWKWPLA
Trigger: TGCCAGAGGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCCACAAGATCAGTGTCACAGTCAGCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGAGATGCCATTTCCTCTaGGTCCTTGCTCCAGTGTAC +
Preference number: 3 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKRCHFL*VLAPVY
Trigger: GTACACTGGAGCAAGGACCAAGAGGAAATGGCATCT...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCTGATTGCTGACTCTTaGGGTGACCTTTGGGCCACC +
Preference number: 3 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQLIADS*GDLWAT
Trigger: GGTGGCCCAAAGGTCACCCAAAGAGTCAGCAATCAG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR TCA 72 bp CTGGCCTATGTCCTGAGCCAGTTGTGTGCTTTTCACTaGGACATCAGGGTTGCCCTTAAAGCTGGGAGTCTC +
Preference number: 3 (lower is better)
Translates to: LAYVLSQLCAFH*DIRVALKAGSL
Trigger: GAGACTCCCAGCTTTAAGGGCAACCCTGATGTCTCAGTGAAAAGCACACAACTGGCTCAGGACATAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR GCA 72 bp TGCCTTGTGCACAGCCTCTTCAATGTCCAGCAGCCTTaGCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGT +
Preference number: 3 (lower is better)
Translates to: CLVHSLFNVQQP*QGLFLQLSNFR
Trigger: ACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTGAAGAGGCTGTGCACAAGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CCA 72 bp ACTGTGGTGGAAGACATGAGGACTGTGTTCCCAAACTaGTCCACCTCCTCATACTGTTCAGTCACGGTTCTC +
Preference number: 3 (lower is better)
Translates to: TVVEDMRTVFPN*STSSYCSVTVL
Trigger: GAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCCTCATGTCTTCCACCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCAGATGCCATTTCCTCTaGGTCCTTGCTCCAGTGTAC +
Preference number: 3 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVRCHFL*VLAPVY
Trigger: GTACACTGGAGCAAGGACCAAGAGGAAATGGCATCT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR GCA 72 bp AATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATaGGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTG +
Preference number: 3 (lower is better)
Translates to: NSGSGVQIHTCR*VGQACVKNMCV
Trigger: CACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR-3UTR CAA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGGAAGAACTGGGCCTATaGAAAGAACTGCGAAAGGGA +
Preference number: 3 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMEELGL*KELRKG
Trigger: TCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTTC...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGAAGAACTGGGCCTATaGAAAGAACTGCGAAAGGGA +
Preference number: 3 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVEELGL*KELRKG
Trigger: TCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTTC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CCA 72 bp ATTAAAGAAATAAAAACTCTGGGTAGAGGGACACTCTaGGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTC +
Preference number: 3 (lower is better)
Translates to: IKEIKTLGRGTL*GAPIQAVVCKF
Trigger: GAATTTGCACACCACTGCCTGAATTGGAGCCCCCCAGAGTGTCCCTCTACCCAGAGTTTTTATTTCTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CCA 72 bp GTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATaGCTGGGAACACTCAGACTAATTAAAGAAATAAAA +
Preference number: 3 (lower is better)
Translates to: VGSVPLQGLRSR*LGTLRLIKEIK
Trigger: TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CTGGGGGCCGTGGTGCTGAGGCCATGTTGTAAGCTGGGCTGGCTATGTCCACTGTCCAGCGAGTTGCACTaGCGTCGGGCCGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LGAVVLRPCCKLGWLCPLSSELH*RRAGPP
Trigger: AGGGGGCCCGGCCCGACGTCAGTGCAACTCGCTGGA...CAGTGGACATAGCCAGCCCAGCTTACAACATGGCCTCAGCACCACGGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGGACGGCCTGAGGCCTaGAGAGGCTCGGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRGRPEA*RGSVSK
Trigger: CTTTGAGACCGAGCCTCTTCAGGCCTCAGGCCGTCC...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCCTCGCTGGCTGGCACTaGACTCGGGTCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLLAGWH*TRVSRG
Trigger: CCCCCGGCTGACCCGAGTCCAGTGCCAGCCAGCGAG...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCCAGCCACCACTTCCTaGCGGGTGATGCCCCGCACC +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEPATTS*RVMPRT
Trigger: GGTGCGGGGCATCACCCGGCAGGAAGTGGTGGCTGG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGCAGCTGGCCAACAGCTaGACGCTGCTCCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRQLANS*TLLLSE
Trigger: CTCTGAGAGGAGCAGCGTGCAGCTGTTGGCCAGCTG...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGTCTGGCCAGCAGGGCTaGTGTGGGAGTGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRSGQQG*CGSEEG
Trigger: CCCTTCTTCACTCCCACAGCAGCCCTGCTGGCCAGA...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTAGCCTCCGCAGGGCCTaGACGTCCACACTGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCSLRRA*TSTLLA
Trigger: CGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCT...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGCTGGGTGGCTCTGCCTaGTCGGTGACTGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRLGGSA*SVTVVE
Trigger: TTCCACCACAGTCACCGAGCAGGCAGAGCCACCCAG...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCTCCGCAGACTCTGCATaGCGGCCAGGAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFSADSA*RPGGLG
Trigger: CCCCAGACCTCCTGGCCGCCATGCAGAGTCTGCGGA...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGTGTGGTGGGAGGCGGTaGGCCTCACTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVECGGRR*ASLGSW
Trigger: CCAGCTGCCCAGTGAGGCCCACCGCCTCCCACCACA...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTAACAGGTGGCAGGTGTaGTGGGAGGCGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCNRWQV*WEAVGL
Trigger: GAGGCCCACCGCCTCCCACCACACCTGCCACCTGTT...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CAA 72 bp CAAAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTaGCGGCCTCCTTCTCCAGGGCTTGCACCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: QRASAGPARPHC*RPPSPGLAPGS
Trigger: TGAACCAGGTGCAAGCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCCTCACCGCGTTGCTTTaGATCTCCTCCCGGCATGCG +
Preference number: 4 (lower is better)
Translates to: ATSVLTRVSSPKACSTEALTALL*ISSRHA
Trigger: CGCATGCCGGGAGGAGATCCAAAGCAACGCGGTGAG...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCCCCGCACCACGTCGATaGTACTGGGGCTTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLPAPRR*YWGFGR
Trigger: TCGGCCGAAGCCCCAGTACCATCGACGTGGTGCGGG...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCAGAACCCGCGGGGATaGACCCAGCGATTACCCGGG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEQNPRG*TQRLPG
Trigger: CCCGGGTAATCGCTGGGTCCATCCCCGCGGGTTCTG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGGCCCCCTCGCTGGCTaGCACTGGACTCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRGPLAG*HWTRVS
Trigger: GCTGACCCGAGTCCAGTGCCAGCCAGCGAGGGGGCC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCCCGAGGTGGGAGCCTaGGTTCCTGGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSPEVGA*VPGWLC
Trigger: GCAGAGCCACCCAGGAACCCAGGCTCCCACCTCGGG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGCGGCCAGGTCCTTCTaGAGACCTCACAGTGATTCC +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRAARSF*RPHSDS
Trigger: GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGC...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp CTGGGGGCCGTGGTGCTGAGGCCATGTTGTAAGCTGGGCTGGCTATGTCCACTGATCCAGCGCATGCACTaGACGTCACCCTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LGAVVLRPCCKLGWLCPLIQRMH*TSPSVG
Trigger: ACCCACCGAGGGTGACGTTCAGTGCATGCGCTGGAT...CAGTGGACATAGCCAGCCCAGCTTACAACATGGCCTCAGCACCACGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTCCAGCGAGTTGCACTaGCGTCGGGCCGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLSSELH*RRAGPP
Trigger: AGGGGGCCCGGCCCGACGTCAGTGCAACTCGCTGGA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGTTCTTGACTGCAGTTTaGCCTCCGACCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRFLTAV*PPTSWP
Trigger: AGGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAA...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGGCTCCATAGTGTTGTaGGCTCCCTGGCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEGSIVL*APWPRL
Trigger: CAGACGGGGCCAGGGAGCTCACAACACTATGGAGCC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCACCAGCCCAGTCCTTaGCACGGAGGTCCCAAGACC +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEHQPSP*HGGPKT
Trigger: GGTCTTGGGACCTCCGTGGCAAGGACTGGGCTGGTG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTCCAACAGCTGCACGCTaGTCCTCTCAGAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCPTAAR*SSQRPC
Trigger: GCAAGGCCTCTGAGAGGAGCAGCGTGCAGCTGTTGG...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCACGTCCACACTGCTTaGGGCCTCCTTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEHVHTA*GLLLQG
Trigger: GCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAGCTCCCCAAAGGCCTaGTCCACTGAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSSSPKA*STEASG
Trigger: GCCCGAGGCCTCAGTGGAGCAGGCCTTTGGGGAGCT...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGGGCTGTGCAGGAACTaGCTCAGCAAGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSGLCRN*LSKGEA
Trigger: CGCCTCCCCCTTGCTGAGGCAGTTCCTGCACAGCCC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTTGGGTGGCGGCAGTaGCAGGTCCTCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGLGWRQ*QVLQGW
Trigger: CCAGCCCTGGAGGACCTGCCACTGCCGCCACCCAAG...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCACAGAGGTCAGGGCATaGAGGCGGCCCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLTEVRA*RRPLLS
Trigger: GGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGT...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCTCCCTGGAGCCCACTaGCCTGTCCACAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSLPGAH*PVHRLG
Trigger: CCCCAACCTGTGGACAGGCCAGTGGGCTCCAGGGAG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCTCCGCAGACTCTGCATaGCGGCCAGGAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSSADSA*RPGGLG
Trigger: CCCCAGACCTCCTGGCCGCCATGCAGAGTCTGCGGA...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCACGGTGGGCTCCAGCTaGAAAGTCAGGTCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ATSVLTRVSSPKACSTEATVGSS*KVRSCH
Trigger: GTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGT...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCCTCCAGGGGTTCTCTaGCCAGCAGGGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSPPGVL*PAGLLW
Trigger: CCACAGCAGCCCTGCTGGCCAGAGAACCCCTGGAGG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGCCCGAGGTGGGAGCCTaGGTTCCTGGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGPEVGA*VPGWLC
Trigger: GCAGAGCCACCCAGGAACCCAGGCTCCCACCTCGGG...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCAGCAAGGGGGAGGCGTaGAGCCCGAGGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRSKGEA*SPRWEP
Trigger: AGGCTCCCACCTCGGGCTCCACGCCTCCCCCTTGCT...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAGCAAGGGGGAGGCGTaGAGCCCGAGGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGSKGEA*SPRWEP
Trigger: AGGCTCCCACCTCGGGCTCCACGCCTCCCCCTTGCT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGGCTGGGGTCCTGGTTaGTGGCGTCCAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGGWGPG*WRPEAG
Trigger: CCCGGCCTCTGGACGCCATCAACCAGGACCCCAGCC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATCCACAGGGACGGCCTaGGGCCTGAAGAGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRSTGTA*GLKRLG
Trigger: ACCGAGCCTCTTCAGGCCTCAGGCCGTCCCTGTGGA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGGGGCCCCACTGTGGTaGGGTGGGATCATGGTTGAG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSGAPLW*GGIMVE
Trigger: CTCAACCATGATCCCACCTCACCACAGTGGGGCCCC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGAAAGGCCTGCTCCACTaGGGCCTCGGGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEKGLLH*GLGLLV
Trigger: CACCAAAAGCCCGAGGCCTCAGTGGAGCAGGCCTTT...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCAGACCTCACCGCGTTaGTTTGGATCTCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEQTSPR*FGSPPG
Trigger: GCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCTG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTCTCCATGGTGCAGGATaGCAGGTGTGGCATGCAGAG +
Preference number: 4 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCLHGAG*QVWHAE
Trigger: CTCTGCATGCCACACCTGGCATCCTGCACCATGGAG...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGCAATATTCCCACTGCTaGCTGGAGTTGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRQYSHC*LELAAS
Trigger: TGAGGCTGCCAACTCCAGGCAGCAGTGGGAATATTG...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCACGTCCACACTGCTTaGGGCCTCCTTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSHVHTA*GLLLQG
Trigger: GCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGTTCCTGGGTGGCTCTaGCTGCTCGGTGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEVPGWL*LLGDCG
Trigger: ACCACAGTCACCGAGCAGGCAGAGCCACCCAGGAAC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATCTCCTCCACCTGGCTaGGGCCTGGTTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRSPPPG*GLVGSW
Trigger: CCAGGAGCCAACCAGGCCCCAGCCAGGTGGAGGAGA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTGGGGGCCGTGGTGCTGAGGCCATGTTGTAAGCTGGGCTGGCTATGTCCACTGGGCTTGAGTTGGAGCTaGCCAGTTGGGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGAVVLRPCCKLGWLCPLGLSWS*PVGSSC
Trigger: GCAGGAAGACCCAACTGGCCAGCTCCAACTCAAGCC...CAGTGGACATAGCCAGCCCAGCTTACAACATGGCCTCAGCACCACGGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCCTCAGCGGCTTGAGTTaGAGCTGGCCAGTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFLSGLS*SWPVGS
Trigger: AGACCCAACTGGCCAGCTCCAACTCAAGCCGCTGAG...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGGCCCCCTCGCTGGCTaGCACTGGACTCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGGPLAG*HWTRVS
Trigger: GCTGACCCGAGTCCAGTGCCAGCCAGCGAGGGGGCC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCAGGCTCCTCCCGCCCTaGCCCAGTACTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRRLLPP*PSTLTW
Trigger: CCAGGTCAGAGTACTGGGCCAGGGCGGGAGGAGCCT...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGGCTCAGAGGCTTGCTaGATGGAGTCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEGSEAC*MESSAR
Trigger: CCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAGCC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCTCCAGGGGTTCTCTaGCCAGCAGGGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRPPGVL*PAGLLW
Trigger: CCACAGCAGCCCTGCTGGCCAGAGAACCCCTGGAGG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCGGAGGTCCCTGGAAATaGCCTCTGGCACTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLGGPWK*PLALAS
Trigger: TGAGGCCAGTGCCAGAGGCCATTTCCAGGGACCTCC...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGGAGGTCCCTGGAAATaGCCTCTGGCACTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEGGPWK*PLALAS
Trigger: TGAGGCCAGTGCCAGAGGCCATTTCCAGGGACCTCC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGCCTGGGTTCCTGGGTaGCTCTGCCTGCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRAWVPG*LCLLGD
Trigger: GTCACCGAGCAGGCAGAGCCACCCAGGAACCCAGGC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCGCCTGGGTTCCTGGGTaGCTCTGCCTGCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGAWVPG*LCLLGD
Trigger: GTCACCGAGCAGGCAGAGCCACCCAGGAACCCAGGC...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAGCCTGGGTTCCTGGGTaGCTCTGCCTGCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRAWVPG*LCLLGD
Trigger: GTCACCGAGCAGGCAGAGCCACCCAGGAACCCAGGC...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTAGGGTCTCTCTTGGCTaGTGGGGTGTTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCRVSLG*WGVCGL
Trigger: CAGACCACAAACACCCCATCAGCCAAGAGAGACCCT...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTTCCACTCGCTGTAGGTaGCCCACTTGGACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCSTRCR*PTWTLS
Trigger: AGACAAGGTCCAAGTGGGTCACCTACAGCGAGTGGA...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCTGGGGGCCGTGGTGCTaGGGCCATGTTGTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGWGPWC*GHVVSW
Trigger: CCAGCTTACAACATGGCCTCAGCACCACGGCCCCCA...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAGGGGCCCCACTGTGGTaGGGTGGGATCATGGTTGAG +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRGAPLW*GGIMVE
Trigger: CTCAACCATGATCCCACCTCACCACAGTGGGGCCCC...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTGGGCAGCAGGAGCCTaGGGAGCAGCCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLWAAGA*GAAPPS
Trigger: GCTGGGAGGGGCTGCTCCTCAGGCTCCTGCTGCCCA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTGGGCAGCAGGAGCCTaGGGAGCAGCCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQWAAGA*GAAPPS
Trigger: GCTGGGAGGGGCTGCTCCTCAGGCTCCTGCTGCCCA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCGGCTCCATAGTGTTGTaGGCTCCCTGGCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGGSIVL*APWPRL
Trigger: CAGACGGGGCCAGGGAGCTCACAACACTATGGAGCC...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAAGATCCAGCGAGTTaGACTGACGTCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSKDPAS*TDVGPG
Trigger: GCCCGGCCCGACGTCAGTGCAACTCGCTGGATCTTT...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCTTGGGTGGGGCCTCTaGTCCAGCCTCTTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLGWGL*SSLFVP
Trigger: GGGGACGAAGAGGCTGGAGCAGAGGCCCCACCCAAG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCCCTATGCCCTGGGCCTaGCCAGCAGAATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLPMPWA*PAESVP
Trigger: AGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGG...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGACACTGGGGACCCTATaGCCTGGGCCTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVTLGTL*PGPAQQ
Trigger: CTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGT...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAAGCCACCGAGCTGTaGCAACGTCCCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSKATEL*QRPQPP
Trigger: TGGTGGCTGGGGACGTTGGCACAGCTCGGTGGCTTT...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGGAGGGGCTCATGGGCTaGTCTTCCAGGAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGEGLMG*SSRRLP
Trigger: GGGCAACCTCCTGGAAGAGCAGCCCATGAGCCCCTC...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGTCTCCTGGCTCTCTTaGATCCTGTTGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEVSWLS*ILLPEG
Trigger: CCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGAC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCATGCCAGGTGTGGCATaGAGAGTCCGCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGMPGVA*RVRRVP
Trigger: GGGGACCCTGCGGACTCTGCATGCCACACCTGGCAT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGGTGCCCCTGCCCTGTaGCCGAGAGCACATACTTGG +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRGAPAL*PRAHTW
Trigger: CCAAGTATGTGCTCTCGGGCACAGGGCAGGGGCACC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCACCAGCCCAGTCCTTaGCACGGAGGTCCCAAGACC +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGHQPSP*HGGPKT
Trigger: GGTCTTGGGACCTCCGTGGCAAGGACTGGGCTGGTG...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCAGAGTAGGCAGTCAGTaGGACCAGGCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLRVGSQ*DQALLC
Trigger: ACAGAGCAGGGCCTGGTCGCACTGACTGCCTACTCT...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCCCTGGGCAGACTTCTaGCATCGCCTTCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGPWADF*HRLPWW
Trigger: CCACCAGGGAAGGCGATGGCAGAAGTCTGCCCAGGG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGAGGGGCTCAGAGGCTTaGTGGATGGAGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVERGSEA*WMESSA
Trigger: TGCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCT...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGGGGGCCACCTGTGTCTaGGTGTCGGCCATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGGATCV*VSAILL
Trigger: CAGAAGGATGGCCGACACCCAGACACAGGTGGCCCC...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCCTGCACATCTCCGCTaGCTGCAGGCTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGPAHLR*LQAPSQ
Trigger: CTGTGAGGGAGCCTGCAGCCAGCGGAGATGTGCAGG...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCACGTCGATGGTACTaGGGCTTCGGCCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRPRRWY*GFGRAG
Trigger: ACCAGCTCGGCCGAAGCCCCAGTACCATCGACGTGG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGCTGCACATCGCCCTTTaGGGGTGCCTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKLHIAL*GCLRLG
Trigger: CCCCAGCCTGAGGCACCCCCAAAGGGCGATGTGCAG...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGCAGGATGCCAGGTGTaGCATGCAGAGTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGAGCQV*HAESAG
Trigger: CCCTGCGGACTCTGCATGCCACACCTGGCATCCTGC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTACCAGCAGCCCCTGCTaGTCCACATCTGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTTSSPC*STSGRR
Trigger: GCGCCGGCCAGATGTGGACCAGCAGGGGCTGCTGGT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCGTCCTGGATGGGGTTaGAAGTGGCTGTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSRPGWG*KWLLGW
Trigger: CCACCCCAACAGCCACTTCCAACCCCATCCAGGACG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGACGGTGGGCTCCAGCTaGAAAGTCAGGTCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVETVGSS*KVRSCH
Trigger: GTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGT...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGGCTCAGAGGCTTGCTaGATGGAGTCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSGSEAC*MESSAR
Trigger: CCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAGCC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCCCGAGGTGGGAGCCTaGGTTCCTGGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMPEVGA*VPGWLC
Trigger: GCAGAGCCACCCAGGAACCCAGGCTCCCACCTCGGG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGAGCAAGGGGGAGGCGTaGAGCCCGAGGTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMSKGEA*SPRWEP
Trigger: AGGCTCCCACCTCGGGCTCCACGCCTCCCCCTTGCT...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCTCCTCCACAAGCAGCTaGGAGCCCCCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGSSTSS*EPPSYP
Trigger: GGGGTAGGATGGGGGCTCCCAGCTGCTTGTGGAGGA...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CAA 72 bp GCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTaGTGCACAGCCTCTTCAATGTCCAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ASGWRLDMELSA*CTASSMSSSLA
Trigger: GGCAAGGCTGCTGGACATTGAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACAGCTCCTGGATCTCTaGGCGCAGTTCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRQLLDL*AQFQGA
Trigger: AGCCCCTTGGAACTGCGCTCAGAGATCCAGGAGCTG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCAGCTCCTGGATCTCTaGGCGCAGTTCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGQLLDL*AQFQGA
Trigger: AGCCCCTTGGAACTGCGCTCAGAGATCCAGGAGCTG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGTCCACTCGCTGTAGGTaGCCCACTTGGACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVESTRCR*PTWTLS
Trigger: AGACAAGGTCCAAGTGGGTCACCTACAGCGAGTGGA...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCCTTTCCAATGGCCTaGGGAGGGCAAGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMAFPMA*GGQGVA
Trigger: GGCCACCCCTTGCCCTCCTCAGGCCATTGGAAAGGC...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGACTGGGGTTCCCTCTaGGAAAGCTGGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRDWGSL*ESWTPP
Trigger: TGGGGGTGTCCAGCTTTCTCAGAGGGAACCCCAGTC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR TCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTGGGGGCCGTGGTGCTaGGGCCATGTTGTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLWGPWC*GHVVSW
Trigger: CCAGCTTACAACATGGCCTCAGCACCACGGCCCCCA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACTGGGCAGCAGGAGCCTaGGGAGCAGCCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDWAAGA*GAAPPS
Trigger: GCTGGGAGGGGCTGCTCCTCAGGCTCCTGCTGCCCA...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCAAAGGCCTGCTCCACTaGGGCCTCGGGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGKGLLH*GLGLLV
Trigger: CACCAAAAGCCCGAGGCCTCAGTGGAGCAGGCCTTT...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAGAGCAACTTCCGTGCTaGCCCGTGTCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQREQLPC*PVSAPQ
Trigger: TTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTC...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGGCTCCATAGTGTTGTaGGCTCCCTGGCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLGSIVL*APWPRL
Trigger: CAGACGGGGCCAGGGAGCTCACAACACTATGGAGCC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGATCTCCTCCCGGCATaGGGCCTTGACCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSDLLPA*GLDLMD
Trigger: ATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTACACTGGGGACCCTATaGCCTGGGCCTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCTLGTL*PGPAQQ
Trigger: CTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGT...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGCTCTTCCAGGAGGTTaGCCCCTTGGATGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSALPGG*PLGCSQ
Trigger: CTGAGAGCATCCAAGGGGGCAACCTCCTGGAAGAGC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAGGATGCCTCCATGGTaGAGGATGCCAGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSRMPPW*RMPGVA
Trigger: TGCCACACCTGGCATCCTGCACCATGGAGGCATCCT...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCTTCAGAACTTGCTGGTaGAGGCTCTGGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFFRTCW*RLWASA
Trigger: AGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAA...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGTTGGGGTGGGGCCCTaGTTGTGCTTGTTCAGAACT +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEVGVGP*LCLFRT
Trigger: AGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAAC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCAGGGCAGTCTCCCTGTaGCTTGACTGGGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRRAVSL*LDWGSL
Trigger: GAGGGAACCCCAGTCAAGGCACAGGGAGACTGCCCT...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGGTTTAGGGGGCAGCTaGGGCTTCTTCTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRGLGGS*GFFFGG
Trigger: GCCCCCAAAGAAGAAGCCGCAGCTGCCCCCTAAACC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAGGTTTAGGGGGCAGCTaGGGCTTCTTCTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRGLGGS*GFFFGG
Trigger: GCCCCCAAAGAAGAAGCCGCAGCTGCCCCCTAAACC...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCTGGCTGGGAGTAGCTaGAGGACACCTGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGLAGSS*RTPAPS
Trigger: AGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCGCTGCTGATGGAACTTaGAGAAGGATTCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: ATSVLTRVSSPKACSTEAAADGT*RRIPWV
Trigger: CACCCAAGGAATCCTTCTCCAAGTTCCATCAGCAGC...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCCTGCACATCTCCGCTaGCTGCAGGCTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLPAHLR*LQAPSQ
Trigger: CTGTGAGGGAGCCTGCAGCCAGCGGAGATGTGCAGG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTGGGGGCCGTGGTGCTGAGGCCATGTTGTAAGCTGGGCTGGCTATGTCCACTGTCCTTCTTCTCTGCTTaGACTCCCATGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LGAVVLRPCCKLGWLCPLSFFSA*TPMGQN
Trigger: GTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGA...CAGTGGACATAGCCAGCCCAGCTTACAACATGGCCTCAGCACCACGGCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGGGGACCCTATGCCCTaGGCCTGCCCAGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLGDPMP*ACPAES
Trigger: TGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCCGCACCACGTCGATaGTACTGGGGCTTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCPAPRR*YWGFGR
Trigger: TCGGCCGAAGCCCCAGTACCATCGACGTGGTGCGGG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGGCCGGCGCAGGACTTaGCAGATGATCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGGRRRT*QMILGS
Trigger: ACTTCCCAGGATCATCTGCCAAGTCCTGCGCCGGCC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCTGCTGGTCCACATCTaGCCGGCGCAGGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLLVHI*PAQDLA
Trigger: TGCCAAGTCCTGCGCCGGCCAGATGTGGACCAGCAG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCTCGCTGGCTGGCACTaGACTCGGGTCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWALAGWH*TRVSRG
Trigger: CCCCCGGCTGACCCGAGTCCAGTGCCAGCCAGCGAG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTCTGGGCCCCCTCGCTaGCTGGCACTGGACTCGGGT +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQSGPPR*LALDSG
Trigger: ACCCGAGTCCAGTGCCAGCCAGCGAGGGGGCCCAGA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGTTGGAAGTGGCTGTTaGGGTGGGGCCCTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRVGSGC*GGALLV
Trigger: CACAAGCAGGGCCCCACCCCAACAGCCACTTCCAAC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGCTTGGAGGCCCCCTaGGCAGACTTCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLSLEAP*ADFCHR
Trigger: GCGATGGCAGAAGTCTGCCCAGGGGGCCTCCAAGCT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGGCTCAGAGGCTTGCTaGATGGAGTCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRGSEAC*MESSAR
Trigger: CCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAGCC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCTCTCAGGGGCCCCTTaGTGGGAACCTTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLSGAP*WEPSMG
Trigger: GCCCATGGAAGGTTCCCACCAAGGGGCCCCTGAGAG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGTGACACTGATCTTGTaGGCACTGTGGTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRVTLIL*ALWSFG
Trigger: TCCAAAAGACCACAGTGCCCACAAGATCAGTGTCAC...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCATGTCTCCTGCCTCCTaGTGGAAGGGGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSMSPAS*WKGQLR
Trigger: CCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACAT...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGTTCCTTGTGGCCGACTaGATGGAGATAAATGTTGGG +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRFLVAD*MEINVG
Trigger: CCCAACATTTATCTCCATCCAGTCGGCCACAAGGAA...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGACTGTGTTCCCAAACTaGTCCACCTCCTCATACTGT +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRTVFPN*STSSYC
Trigger: ACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGT...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTGTGGTGGGAGGCGGTaGGCCTCACTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQCGGRR*ASLGSW
Trigger: CCAGCTGCCCAGTGAGGCCCACCGCCTCCCACCACA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTGTGGTGGGAGGCGGTaGGCCTCACTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLCGGRR*ASLGSW
Trigger: CCAGCTGCCCAGTGAGGCCCACCGCCTCCCACCACA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTCCTCCACAAGCAGCTaGGAGCCCCCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLSSTSS*EPPSYP
Trigger: GGGGTAGGATGGGGGCTCCCAGCTGCTTGTGGAGGA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCATCCAGCGCATGCACTaGACGTCACCCTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLIQRMH*TSPSVG
Trigger: ACCCACCGAGGGTGACGTTCAGTGCATGCGCTGGAT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCCCGGCATGCGGCCTTaGCCTCATGGATGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDPGMRP*PHGWRP
Trigger: AGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCCACTTCCTGCCGGGTaGTGCCCCGCACCACGTCGA +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLPLPAG*CPAPRR
Trigger: TCGACGTGGTGCGGGGCATCACCCGGCAGGAAGTGG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGTTGCATCCTGTTGCCTaGGGGGCTCATGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVLHPVA*GAHGLL
Trigger: GAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAA...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCCTGGGAAGTTCACCTaGCACCAGCTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGPGKFT*HQLLLS
Trigger: CGAAAGGAGGAGCTGGTGTCAGGTGAACTTCCCAGG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGGGGTCTTTGTCTGTaGCCCTCCAGGGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRWGLCL*PSRGSL
Trigger: CAGAGAACCCCTGGAGGGTCACAGACAAAGACCCCA...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCTTCTTGACTGCAGTTTaGCCTCCGACCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSFLTAV*PPTSWP
Trigger: AGGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAA...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGCCTGGCCTATGTCCTaGGCCAGTTGTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSAWPMS*ASCVLF
Trigger: GAAAAGCACACAACTGGCTCAGGACATAGGCCAGGC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCAGGTCCTCTGCAGTTaGCATCCTCATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEQVLCS*HPHGWC
Trigger: ACACCAACCATGAGGATGGCAACTGCAGAGGACCTG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCCTCAGCCAGATTCTTaGGGAGCTCAGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSPQPDS*GAQGGC
Trigger: ACATCCACCCTGAGCTCCGCAAGAATCTGGCTGAGG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCTGTCACTGGATAGATaGCCCTCACCGTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGLSLDR*PSPSWG
Trigger: TCCCCAGGACGGTGAGGGGCATCTATCCAGTGACAG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGCGGCCCTTGCTGTCCTaGATGGCATACACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVRPLLS*MAYTGD
Trigger: GTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCG...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAAAGCCACCGAGCTGTaGCAACGTCCCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLKATEL*QRPQPP
Trigger: TGGTGGCTGGGGACGTTGGCACAGCTCGGTGGCTTT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCATCGCCCTTTGGGGGTaGCTCAGGCTGGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLIALWG*LRLGVS
Trigger: GGAGACCCCCAGCCTGAGGCACCCCCAAAGGGCGAT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAACCACCGGATGGTCTaGACATCGCCCTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGNHRMV*TSPFGG
Trigger: ACCCCCAAAGGGCGATGTGCAGACCATCCGGTGGTT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGGGACCTGGCTAACCTaGAGGTGCTGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGGTWLT*RCCSLE
Trigger: CTCCAGGGAGCAGCACCTGCAGGTTAGCCAGGTCCC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCAGTTGGGTCTTCCTaGACCAGCAGCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTPVGSS*TSSPCW
Trigger: CCAGCAGGGGCTGCTGGTGCAGGAAGACCCAACTGG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCTTCAATATTCCCACTaGTGCCTGGAGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVELQYSH*CLELAA
Trigger: GGCTGCCAACTCCAGGCAGCAGTGGGAATATTGAAG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAGAGTAGGCAGTCAGTaGGACCAGGCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGRVGSQ*DQALLC
Trigger: ACAGAGCAGGGCCTGGTCGCACTGACTGCCTACTCT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGCCATCCGCAGACTCTaGATGGCGGCCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTAIRRL*MAARRS
Trigger: AGACCTCCTGGCCGCCATGCAGAGTCTGCGGATGGC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTGCCATCCGCAGACTCTaGATGGCGGCCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCAIRRL*MAARRS
Trigger: AGACCTCCTGGCCGCCATGCAGAGTCTGCGGATGGC...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGTGCGGGCTGGCACCTaGAGCTTGGGGCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPVRAGT*SLGPRG
Trigger: GCCTCTGGGCCCCAAGCTGCAGGTGCCAGCCCGCAC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTGAACCTTCCATGGGCTaGTCTCCTGAGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMAEPSMG*SPEGPG
Trigger: CCCCGGCCCCTCAGGAGAGCAGCCCATGGAAGGTTC...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGTCCTTCTCCAGGGCTTaGACCTGGTTCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKSFSRA*TWFRRP
Trigger: GGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGA...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCCTGCACGTCCACACTaGTTGCGGCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLPARPH*LRPPSP
Trigger: TGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCAGCTCCCCAAAGGCCTaGTCCACTGAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLSSPKA*STEASG
Trigger: GCCCGAGGCCTCAGTGGAGCAGGCCTTTGGGGAGCT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGAGCTCCCCAAAGGCCTaGTCCACTGAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQSSPKA*STEASG
Trigger: GCCCGAGGCCTCAGTGGAGCAGGCCTTTGGGGAGCT...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGTTCCTGGGTGGCTCTaGCTGCTCGGTGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLVPGWL*LLGDCG
Trigger: ACCACAGTCACCGAGCAGGCAGAGCCACCCAGGAAC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTGGGCTGTGCAGGAACTaGCTCAGCAAGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMAGLCRN*LSKGEA
Trigger: CGCCTCCCCCTTGCTGAGGCAGTTCCTGCACAGCCC...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACAACCCAGCTGGGCTGTaGAGGAACTGCCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYNPAGL*RNCLSK
Trigger: CTTGCTGAGGCAGTTCCTGCACAGCCCAGCTGGGTT...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGGTTCTTGTTCAAATTaGTTCTGTTCTGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KSLRRACTSTLLAASFSRGSCSN*FCSAGS
Trigger: GGAGCCAGCAGAACAGAACCAATTTGAACAAGAACC...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCAGTTGCCATCCTCATaGTTGGTGTGGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGQLPSS*LVWGPP
Trigger: AGGTGGCCCCCACACCAACCATGAGGATGGCAACTG...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCTTGGGTGGCGGCAGTaGCAGGTCCTCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCLGWRQ*QVLQGW
Trigger: CCAGCCCTGGAGGACCTGCCACTGCCGCCACCCAAG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGAAGGATTCCTTGGGTaGCGGCAGTGGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLEGFLG*RQWQVL
Trigger: GAGGACCTGCCACTGCCGCCACCCAAGGAATCCTTC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGGAACGTCACCCTCGGTaGGTTCCTCAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKERHPR*VPQSPG
Trigger: TCCTGGGCTCTGAGGAACCCACCGAGGGTGACGTTC...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCTCCTCCACCTGGCTaGGGCCTGGTTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLSPPPG*GLVGSW
Trigger: CCAGGAGCCAACCAGGCCCCAGCCAGGTGGAGGAGA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCCTGCTTGGACTCCCATaGGCCAGAACCTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRLLGLP*ARTSPC
Trigger: ACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAG...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGTGCTGCTCCCGTTGGTaGATCATCTCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKCCSRW*IISRGW
Trigger: CCAGCCCCTGGAGATGATCCACCAACGGGAGCAGCA...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCCTGCACATCGCCCTTTaGGGGTGCCTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLLHIAL*GCLRLG
Trigger: CCCCAGCCTGAGGCACCCCCAAAGGGCGATGTGCAG...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCGAACAACCACCGGATaGTCTGCACATCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSRTTTG*SAHRPL
Trigger: CAAAGGGCGATGTGCAGACCATCCGGTGGTTGTTCG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGGCCTGTCCACAGGTTaGGGCTTGAACATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGGLSTG*GLNIQV
Trigger: CACCTGGATGTTCAAGCCCCAACCTGTGGACAGGCC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCACTCCCTGGAGCCCACTaGCCTGTCCACAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSLPGAH*PVHRLG
Trigger: CCCCAACCTGTGGACAGGCCAGTGGGCTCCAGGGAG...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTTGGAGCTGGCCAGTTaGGTCTTCCTGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYLELAS*VFLHQQ
Trigger: CTGCTGGTGCAGGAAGACCCAACTGGCCAGCTCCAA...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCCAAGCCAGCAGCTGCTaGAGCTCAGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRQASSC*SSGSMS
Trigger: AGACATGGACCCTGAGCTCCAGCAGCTGCTGGCTTG...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTCTGGGCCCCCTCGCTaGCTGGCACTGGACTCGGGT +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVSGPPR*LALDSG
Trigger: ACCCGAGTCCAGTGCCAGCCAGCGAGGGGGCCCAGA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAAAGTGGCTGTTGGGGTaGGGCCCTGCTTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRKWLLG*GPACAC
Trigger: ACAAGCACAAGCAGGGCCCCACCCCAACAGCCACTT...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACAAGTGGCTGTTGGGGTaGGGCCCTGCTTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYKWLLG*GPACAC
Trigger: ACAAGCACAAGCAGGGCCCCACCCCAACAGCCACTT...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCTTTCTGGGGGCTGCTaGGATCCGGGGATCACTTCC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLSGGC*DPGITS
Trigger: GGAAGTGATCCCCGGATCCCAGCAGCCCCCAGAAAG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGTGGTCTCTGCAGCTTaGAGGCCCCCTGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTVVSAA*RPPGQT
Trigger: AGTCTGCCCAGGGGGCCTCCAAGCTGCAGAGACCAC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGCAGAGGCTTGCTGGATaGAGTCCTCAGCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVQRLAG*SPQHGG
Trigger: CCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTG...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCTCTCAGGGGCCCCTTaGTGGGAACCTTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMLSGAP*WEPSMG
Trigger: GCCCATGGAAGGTTCCCACCAAGGGGCCCCTGAGAG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGTCCAGGGCTTGCACCTaGTTCAGGAGGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMSRACT*FRRPWS
Trigger: GCTCCAGGGCCTCCTGAACCAGGTGCAAGCCCTGGA...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGGCACTGTGGTCTTTTaGAGGTCCCTGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSGTVVF*RSLEMA
Trigger: GGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGATCTTGTGGGCACTGTaGTCTTTTGGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEILWAL*SFGGPW
Trigger: CCAGGGACCTCCAAAAGACCACAGTGCCCACAAGAT...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCAACAGGTGGCAGGTGTaGTGGGAGGCGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLNRWQV*WEAVGL
Trigger: GAGGCCCACCGCCTCCCACCACACCTGCCACCTGTT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATACCCACTTCAGTCCTaGGGCAGTGGAGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRYPLQS*GSGGQE
Trigger: TTCCTGGCCTCCACTGCCCCAGGACTGAAGTGGGTA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCTGTCGGCCATCCTTCTaGGAAGAAGGGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGCRPSF*EEGAEM
Trigger: CATCTCTGCCCCTTCTTCTCAGAAGGATGGCCGACA...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCCCGGCATGCGGCCTTaGCCTCATGGATGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPPGMRP*PHGWRP
Trigger: AGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGGCTGGGGTCCTGGTTaGTGGCGTCCAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEGWGPG*WRPEAG
Trigger: CCCGGCCTCTGGACGCCATCAACCAGGACCCCAGCC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTTCCACAGGGACGGCCTaGGGCCTGAAGAGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCSTGTA*GLKRLG
Trigger: ACCGAGCCTCTTCAGGCCTCAGGCCGTCCCTGTGGA...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCAACGAGACACCTGCCCTaGAGGGATCTCCACGCGGCT +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSTRHLP*RDLHAA
Trigger: AGCCGCGTGGAGATCCCTTCAGGGCAGGTGTCTCGT...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTTTGCATCCTGTTGCCTaGGGGGCTCATGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTLHPVA*GAHGLL
Trigger: GAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAA...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGCAGCCTCAGCGGCTTaGGTTGGAGCTGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLAASAA*VGAGQL
Trigger: CAACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGCCTTTCCAATGGCCTaGGGAGGGCAAGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAAFPMA*GGQGVA
Trigger: GGCCACCCCTTGCCCTCCTCAGGCCATTGGAAAGGC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCCTGGCCCAGTACTCTaGCCTGGGCCTCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDPGPVL*PGPPWS
Trigger: ACTCCAGGGAGGCCCAGGTCAGAGTACTGGGCCAGG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR TCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCCCTTGGCTTGGTTCTTaGCTGCAGTTTGACCTCCGA +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSPWLGS*LQFDLR
Trigger: TCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAGG...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCACCAGATGACCAGCTaGATGATGGAGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEHQMTS*MMEMVM
Trigger: CATCACCATCTCCATCATTCAGCTGGTCATCTGGTG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCTTCTAGGGACATGCTaGTTGCTGACTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVELLGTC*LLTLWV
Trigger: CACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGAGCCTTCCTCAAACTTaGGGGAGGTGGCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: PCQGLFLQLSNFRADPCQSLPQT*GRWPGR
Trigger: ACGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCT...CTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCATGGATGGCGCCCTCTaGATCCTGGATGGCACACAG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLMDGAL*ILDGTQ
Trigger: CTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCAT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGATGGATGGCGCCCTCTaGATCCTGGATGGCACACAG +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVMDGAL*ILDGTQ
Trigger: CTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCAT...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGCCTCACCCTGTCCAATaGTGTCCAAGGGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGPHPVQ*CPREGS
Trigger: AGACCCTTCCCTTGGACAGCATTGGACAGGGTGAGG...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGGATCTCCACGCGGCTaGAGTATCTCACAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMGSPRG*SISQAV
Trigger: GACGGCCTGTGAGATACTGCAGCCGCGTGGAGATCC...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGGCTCTTCCAGGAGGTTaGCCCCTTGGATGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVALPGG*PLGCSQ
Trigger: CTGAGAGCATCCAAGGGGGCAACCTCCTGGAAGAGC...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATCTCTTGCATCCTGTTaGCTGAGGGGCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRSLASC*LRGSWA
Trigger: AGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCAGGGTCCCCTCAGCTaGAGTCTCCTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMQGPLS*SLLALL
Trigger: CAAGAGAGCCAGGAGACTGCAGCTGAGGGGACCCTG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCATGCCAGGTGTGGCATaGAGAGTCCGCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLMPGVA*RVRRVP
Trigger: GGGGACCCTGCGGACTCTGCATGCCACACCTGGCAT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCTCCATGGTGCAGGATaGCAGGTGTGGCATGCAGAG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLHGAG*QVWHAE
Trigger: CTCTGCATGCCACACCTGGCATCCTGCACCATGGAG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGGTGCCCCTGCCCTGTaGCCGAGAGCACATACTTGG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLGAPAL*PRAHTW
Trigger: CCAAGTATGTGCTCTCGGGCACAGGGCAGGGGCACC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTTGCACCAGCAGCCCCTaGTGGTCCACATCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLCTSSP*WSTSGR
Trigger: CCGGCCAGATGTGGACCAGCAGGGGCTGCTGGTGCA...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGTGCACCAGCAGCCCCTaGTGGTCCACATCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMCTSSP*WSTSGR
Trigger: CCGGCCAGATGTGGACCAGCAGGGGCTGCTGGTGCA...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCCGCAAGCCAGCAGCTaGTGGAGCTCAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQPQASS*WSSGSM
Trigger: CATGGACCCTGAGCTCCAGCAGCTGCTGGCTTGCGG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCAGCTGGCCAACAGCTaGACGCTGCTCCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMQLANS*TLLLSE
Trigger: CTCTGAGAGGAGCAGCGTGCAGCTGTTGGCCAGCTG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCAATTGGGCTGGTGCTaGAGCTTCCCCAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMQLGWC*SFPSQR
Trigger: CCTCTGGCTGGGGAAGCTGCAGCACCAGCCCAATTG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCTTCAGGGTGGTCTCTaGAGCTTGGAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQLQGGL*SLEAPW
Trigger: CCAGGGGGCCTCCAAGCTGCAGAGACCACCCTGAAG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGAACCTTCCATGGGCTaGTCTCCTGAGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCEPSMG*SPEGPG
Trigger: CCCCGGCCCCTCAGGAGAGCAGCCCATGGAAGGTTC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCTGCACGTCCACACTaGTTGCGGCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCPARPH*LRPPSP
Trigger: TGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGGCTTGGTTCTTGACTaGAGTTTGACCTCCGACCTC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSGLVLD*SLTSDL
Trigger: GAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGTCTCTTGATGTCTCCTaGCTCCTGGTGGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGSLDVS*LLVEGA
Trigger: TGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGA...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGGGCTGTGCAGGAACTaGCTCAGCAAGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAGLCRN*LSKGEA
Trigger: CGCCTCCCCCTTGCTGAGGCAGTTCCTGCACAGCCC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCATTCACACATGTCGATaGGTGGGCCAGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGIHTCR*VGQACV
Trigger: CACACAGGCCTGGCCCACGCATCGACATGTGTGAAT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGGCTTCCCATTTGGGGTaGAGAGTGGGGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGASHLG*RVGDSH
Trigger: ATGACTGTCCCCCACTCTGCACCCCAAATGGGAAGC...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGACAGCTTTCTGGGGGCTaGTGGGATCCGGGGATCACT +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGQLSGG*WDPGIT
Trigger: AGTGATCCCCGGATCCCAGCAGCCCCCAGAAAGCTG...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGGGGCCACCTGTGTCTaGGTGTCGGCCATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLGATCV*VSAILL
Trigger: CAGAAGGATGGCCGACACCCAGACACAGGTGGCCCC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTACAGCACGGGCTCCTTaGCAGCTGGCCTCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTTARAP*QLASRV
Trigger: AACACGAGAGGCCAGCTGCCAAGGAGCCCGTGCTGT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTTGCGGGAGGTGGCCTaGACGTCACCACACAGCACG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQLREVA*TSPHST
Trigger: CGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATTGCGGGAGGTGGCCTaGACGTCACCACACAGCACG +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSLREVA*TSPHST
Trigger: CGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAA...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATGGCTGGGGCCTGGTTaGCTCCTGGTCTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGWLGPG*LLVCAV
Trigger: AACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCA...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCAACGTCTCCTCCACCTaGCTGGGGCCTGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLNVSST*LGPGWL
Trigger: GAGCCAACCAGGCCCCAGCCAGGTGGAGGAGACGTT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCTCTCAAAGAGCATCCTaGTACCCTGCACATCTCCGC +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSSQRAS*YPAHLR
Trigger: GCGGAGATGTGCAGGGTACCAGGATGCTCTTTGAGA...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATCACCCTTCAGCTCCTaGATCTCTGAGCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRSPFSS*ISERSS
Trigger: GGAACTGCGCTCAGAGATCCAGGAGCTGAAGGGTGA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGCGGCCTTGACCTCATaGATGGCGCCCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLAALTS*MAPSAS
Trigger: GGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTTGCCCCTCACCGTCCTaGGGATCCACTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMACPSPS*GSTRCR
Trigger: CCTACAGCGAGTGGATCCCCAGGACGGTGAGGGGCA...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGGGCTTCGGCCGAGCTaGTCTAGGGGCTGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLGLRPS*SRGCVS
Trigger: TGAGACACAGCCCCTAGACCAGCTCGGCCGAAGCCC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCAGGGCTTCGGCCGAGCTaGTCTAGGGGCTGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSGLRPS*SRGCVS
Trigger: TGAGACACAGCCCCTAGACCAGCTCGGCCGAAGCCC...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCCACGTCGATGGTACTaGGGCTTCGGCCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQPRRWY*GFGRAG
Trigger: ACCAGCTCGGCCGAAGCCCCAGTACCATCGACGTGG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTGCTGCTCCCGTTGGTaGATCATCTCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCCCSRW*IISRGW
Trigger: CCAGCCCCTGGAGATGATCCACCAACGGGAGCAGCA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGTCCTGCTGCTCCCGTTaGTGGATCATCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMSCCSR*WIISRG
Trigger: GCCCCTGGAGATGATCCACCAACGGGAGCAGCAGGA...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCAGAACCCGCGGGGATaGACCCAGCGATTACCCGGG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVQNPRG*TQRLPG
Trigger: CCCGGGTAATCGCTGGGTCCATCCCCGCGGGTTCTG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTGCCTGAGGGGCTCATaGGCTGCTCTTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCCLRGS*AALPGG
Trigger: ACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGAAGACAGAGCTCCCCTaGCCCTCGGGCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQKTELP*PSGLHE
Trigger: CTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCTT...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGTTGGAAGTGGCTGTTaGGGTGGGGCCCTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGVGSGC*GGALLV
Trigger: CACAAGCAGGGCCCCACCCCAACAGCCACTTCCAAC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCACGGTGGGCTCCAGCTaGAAAGTCAGGTCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLTVGSS*KVRSCH
Trigger: GTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTGCGGCTTCTTCTTTaGGGGCATGGTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTLRLLL*GHGGVQ
Trigger: CTGGACCCCACCATGCCCCCAAAGAAGAAGCCGCAG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACCTGGCCAGAGGTATGTaGCCCTGGTCTACAGTAGTG +
Preference number: 4 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYLARGM*PWSTVV
Trigger: CACTACTGTAGACCAGGGCCACATACCTCTGGCCAG...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCTGTTGTAAGCTGGGCTaGCTATGTCCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLCCKLG*LCPLGH
Trigger: ATGTCCCAGTGGACATAGCCAGCCCAGCTTACAACA...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGGCACTGTGGTCTTTTaGAGGTCCCTGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGGTVVF*RSLEMA
Trigger: GGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCATGTCTCCTGCCTCCTaGTGGAAGGGGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLMSPAS*WKGQLR
Trigger: CCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACAT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCAACGCTGTGTCCAGTTaGCTCTGTTCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRNAVSS*LCSSPG
Trigger: CCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTT...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGAAGAAGGGGCAGAGATaGGGATGGGATTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKKKGQR*GWDWEP
Trigger: AGGCTCCCAATCCCATCCTCATCTCTGCCCCTTCTT...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGGACGGCCTGAGGCCTaGAGAGGCTCGGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVGRPEA*RGSVSK
Trigger: CTTTGAGACCGAGCCTCTTCAGGCCTCAGGCCGTCC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGTCTCAAAAAGCCAAGTaGACTTGTGGACAGAACCCG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVESQKAK*TCGQNP
Trigger: CGGGTTCTGTCCACAAGTTCACTTGGCTTTTTGAGA...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGCCCTCGGGCCTCCATaGGGATGCCTCCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPALGPP*GCLHGA
Trigger: TGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAGTCGTGGCTCCTTCTaGCTTTCCCAAGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGSRGSF*LSQDCH
Trigger: ATGGCAGTCTTGGGAAAGTCAGAAGGAGCCACGACT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGTCTGTTCCTTCAGTTaGGCAACTTCCGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGVCSFS*ATSVLT
Trigger: GGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGAC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCCTTGGCTTGGTTCTTaGCTGCAGTTTGACCTCCGA +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGPWLGS*LQFDLR
Trigger: TCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAGG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCAAAGATCCAGCGCATaGACTGAACGTCACCCTCGG +
Preference number: 4 (lower is better)
Translates to: PCQGLFLQLSNFRADPCQQRSSA*TERHPR
Trigger: CCGAGGGTGACGTTCAGTGCATGCGCTGGATCTTTG...CTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTCCAGTTCCTTGGCTTaGCCTGTCAGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLSSSLA*PVSSSS
Trigger: ACTGGACGAGCTGACAGGGCAAGCCAAGGAACTGGA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCACATCTCCGCTGGCTaGAGGCTCCCTCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCHISAG*RLPHSG
Trigger: GCCACTGTGAGGGAGCCTGCAGCCAGCGGAGATGTG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCAAAGATCCAGCGAGTTaGACTGACGTCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLKDPAS*TDVGPG
Trigger: GCCCGGCCCGACGTCAGTGCAACTCGCTGGATCTTT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCTGTCACTGGATAGATaGCCCTCACCGTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMLSLDR*PSPSWG
Trigger: TCCCCAGGACGGTGAGGGGCATCTATCCAGTGACAG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACAGTTCCTTCTTCTCTaGTTGGACTCCCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRQFLLL*LDSHGP
Trigger: TGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCTATGCCCTGGGCCTaGCCAGCAGAATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCPMPWA*PAESVP
Trigger: AGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCATGGAGGCGGCCCTTaGTGTCCTGCATGGCATACA +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMHGGGP*CPAWHT
Trigger: TGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACCAGCCACCACTTCCTaGCGGGTGATGCCCCGCACC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEPATTS*RVMPRT
Trigger: GGTGCGGGGCATCACCCGGCAGGAAGTGGTGGCTGG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGGGACCTGGCTAACCTaGAGGTGCTGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAGTWLT*RCCSLE
Trigger: CTCCAGGGAGCAGCACCTGCAGGTTAGCCAGGTCCC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGGTTGCCCCCTTGGATaGTCTCAGCTGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCGCPLG*SQLPGS
Trigger: GCTCCCTGGCAGCTGAGAGCATCCAAGGGGGCAACC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGAGGGGCTCATGGGCTaGTCTTCCAGGAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDEGLMG*SSRRLP
Trigger: GGGCAACCTCCTGGAAGAGCAGCCCATGAGCCCCTC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACAATATTCCCACTGCTaGCTGGAGTTGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRQYSHC*LELAAS
Trigger: TGAGGCTGCCAACTCCAGGCAGCAGTGGGAATATTG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCAATTGGGCTGGTGCTaGAGCTTCCCCAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQQLGWC*SFPSQR
Trigger: CCTCTGGCTGGGGAAGCTGCAGCACCAGCCCAATTG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGTGGGGCCCTGCTTGTaGTTGTTCAGAACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLVGPCL*LFRTCW
Trigger: CCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCAC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCGTTGGTGTTCTCTTTaGCCCACCTCCGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGRWCSL*PTSEEK
Trigger: CTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTCCTTCTCCAGGGCTTaGACCTGGTTCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQSFSRA*TWFRRP
Trigger: GGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCACGTCCACACTGCTTaGGGCCTCCTTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLHVHTA*GLLLQG
Trigger: GCCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCCCTGCACGTCCACACTaGTTGCGGCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLPARPH*LRPPSP
Trigger: TGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGG...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTAGCCTCCGCAGGGCCTaGACGTCCACACTGCTTGCG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPSLRRA*TSTLLA
Trigger: CGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCT...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGAGCTGAGTGCCTTGTaGACAGCCTCTTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRELSAL*TASSMS
Trigger: GGACATTGAAGAGGCTGTGCACAAGGCACTCAGCTC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAGACATGGAGCTGAGTaGCTTGTGCACAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGRHGAE*LVHSLF
Trigger: GAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCGGCTTGGTTCTTGACTaGAGTTTGACCTCCGACCTC +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGGLVLD*SLTSDL
Trigger: GAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCC...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTCTCTTGATGTCTCCTaGCTCCTGGTGGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLSLDVS*LLVEGA
Trigger: TGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCCTGGGTGGCTCTGCCTaGTCGGTGACTGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLLGGSA*SVTVVE
Trigger: TTCCACCACAGTCACCGAGCAGGCAGAGCCACCCAG...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTAACCCAGCTGGGCTGTaGAGGAACTGCCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCNPAGL*RNCLSK
Trigger: CTTGCTGAGGCAGTTCCTGCACAGCCCAGCTGGGTT...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCCTACCCCCACGCCTGTaGAACTCTGTGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLLPPRL*NSVGLF
Trigger: GAAGAGGCCCACAGAGTTGCACAGGCGTGGGGGTAG...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGATTCACACATGTCGATaGGTGGGCCAGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVIHTCR*VGQACV
Trigger: CACACAGGCCTGGCCCACGCATCGACATGTGTGAAT...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGTTGGTTCTGTTCTGCTaGCTCCAACAGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVELVLFC*LQQTPS
Trigger: AGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAA...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGGGCTCCTTGGCAGCTaGCCTCTCGTGTTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTGLLGS*PLVFSN
Trigger: ATTGGAGAACACGAGAGGCCAGCTGCCAAGGAGCCC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCCTGGTCTGTGCTGTTaGCAAAGGAGCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGPGLCC*QRSLPQ
Trigger: TTGAGGAAGGCTCCTTTGCCAACAGCACAGACCAGG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGGCCTGGTTGGCTCCTaGTCTGTGCTGTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTGLVGS*SVLLAK
Trigger: CTTTGCCAACAGCACAGACCAGGAGCCAACCAGGCC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCTCTGCATCCTGGATaGCACACAGGGGCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCPLHPG*HTGAPF
Trigger: AAACGGAGCCCCTGTGTGCCATCCAGGATGCAGAGG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGCGGCCTTGACCTCATaGATGGCGCCCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLAALTS*MAPSAS
Trigger: GGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTACCTGGCTGGGGTCCTaGTTGATGGCGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLTWLGS*LMASRG
Trigger: GCCTCTGGACGCCATCAACCAGGACCCCAGCCAGGT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCAGGTCTGGGGATGGCTaGAAGTCCTTCTCATCTACC +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRRSGDG*KSFSST
Trigger: GGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCT...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAGGTCTGGGGATGGCTaGAAGTCCTTCTCATCTACC +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGRSGDG*KSFSST
Trigger: GGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAAGGTGGGATAAGGTCTaGGGATGGCTGGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRRWDKV*GWLEVL
Trigger: AAGGACTTCCAGCCATCCCCAGACCTTATCCCACCT...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAAACATCTGGACCAGGTaGGATAAGGTCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRNIWTR*DKVWGW
Trigger: CCATCCCCAGACCTTATCCCACCTGGTCCAGATGTT...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGGACCACTTCCTCCTTaGGTGGGGCCTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLGPLPP*VGPLLQ
Trigger: CTGGAGCAGAGGCCCCACCCAAGGAGGAAGTGGTCC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCAAATAGCCACAGGGTaGAGCGGACATCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLQIATG*SGHHQG
Trigger: TCCCTGGTGATGTCCGCTCCACCCTGTGGCTATTTG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGCAAATAGCCACAGGGTaGAGCGGACATCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVQIATG*SGHHQG
Trigger: TCCCTGGTGATGTCCGCTCCACCCTGTGGCTATTTG...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCACAGAGGTCAGGGCATaGAGGCGGCCCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVTEVRA*RRPLLS
Trigger: GGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTCCTGCTGCTCCCGTTaGTGGATCATCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQSCCSR*WIISRG
Trigger: GCCCCTGGAGATGATCCACCAACGGGAGCAGCAGGA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGCCAAGTGAACTTGTaGACAGAACCCGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLSQVNL*TEPAGM
Trigger: CATCCCCGCGGGTTCTGTCCACAAGTTCACTTGGCT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCCAGGGAGCCCATaGGACAATTCTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGLPGSP*DNSQKA
Trigger: GGCTTTTTGAGAATTGTCCCATGGGCTCCCTGGCAG...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGCCGAGAGCACATACTTaGCAAGACAGAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKPRAHT*QDRAPL
Trigger: CAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCTCGG...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTGCTGGTCCACATCTaGCCGGCGCAGGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDLLVHI*PAQDLA
Trigger: TGCCAAGTCCTGCGCCGGCCAGATGTGGACCAGCAG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTGGCTTGAGTTGGAGCTaGCCAGTTGGGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCGLSWS*PVGSSC
Trigger: GCAGGAAGACCCAACTGGCCAGCTCCAACTCAAGCC...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATCCAGTGGGGGAACATaGATGATGCTCTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRSSGGT*MMLSVG
Trigger: CCCAACTGAGAGCATCATCCATGTTCCCCCACTGGA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACGGCCTTATGTTGCTTTaGGTAGCCCCAGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYGLMLL*VAPAFR
Trigger: TCGGAAAGCTGGGGCTACCCAAAGCAACATAAGGCC...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCTGGACACCCCCAGGTaGGTCAAAGGTCCTCACGGG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLLDTPR*VKGPHG
Trigger: CCCGTGAGGACCTTTGACCCACCTGGGGGTGTCCAG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCATCGCCTTCCCTGGTaGCCCCCAGGCCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDHRLPW*PPGHLC
Trigger: ACACAGATGGCCTGGGGGCCACCAGGGAAGGCGATG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTGAGTCCTCAGCACGGTaGGCTCCAGCTGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCESSAR*APAGKS
Trigger: TGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTC...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCTGCGGCTTCTTCTTTaGGGGCATGGTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQLRLLL*GHGGVQ
Trigger: CTGGACCCCACCATGCCCCCAAAGAAGAAGCCGCAG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGAGTGGGAACCTTGGCTaGCTGAGGGATGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: PCQGLFLQLSNFRADPCQSGNLG*LRDGCI
Trigger: GATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACT...CTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAATCTTGTGGGCACTGTaGTCTTTTGGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRILWAL*SFGGPW
Trigger: CCAGGGACCTCCAAAAGACCACAGTGCCCACAAGAT...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCAGGGAGAATCTCGGCTaGAAGGTAAAACCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGRENLG*KVKPEE
Trigger: CTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCT...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGATGGAGATAAATGTTaGGGAGGAGGGAGAATCTCG +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEDGDKC*GGGRIS
Trigger: CGAGATTCTCCCTCCTCCCCAACATTTATCTCCATC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCGGTTGCACAGAGCACTaGGTGATGTCCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGGCTEH*VMSFFP
Trigger: TGGGAAGAAGGACATCACCCAGTGCTCTGTGCAACC...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTACTGCTGAACCCAGCTaGGCTGTGCAGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTTAEPS*AVQELP
Trigger: AGGCAGTTCCTGCACAGCCCAGCTGGGTTCAGCAGT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGCCTCACTGGGCAGCTaGCTGGGAGTAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVASLGS*LGVAAG
Trigger: TCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGAGGC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGCCTCACTGGGCAGCTaGCTGGGAGTAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAASLGS*LGVAAG
Trigger: TCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGAGGC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGCCTCACTGGGCAGCTaGCTGGGAGTAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDASLGS*LGVAAG
Trigger: TCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGAGGC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTCCTCCACAAGCAGCTaGGAGCCCCCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVSSTSS*EPPSYP
Trigger: GGGGTAGGATGGGGGCTCCCAGCTGCTTGTGGAGGA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGGATTAAGGAGCAGATaGCTGGGAACACTCAGACTA +
Preference number: 4 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEGLRSR*LGTLRL
Trigger: TAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAACGCTGTGTCCAGTTaGCTCTGTTCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLNAVSS*LCSSPG
Trigger: CCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTAGGGTCTCTCTTGGCTaGTGGGGTGTTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCRVSLG*WGVCGL
Trigger: CAGACCACAAACACCCCATCAGCCAAGAGAGACCCT...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGCCCTCGGGCCTCCATaGGGATGCCTCCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIALGPP*GCLHGA
Trigger: TGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCAGTCTCCCTGTGCCTTaGCTGGGGTTCCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLSLPVP*LGFPLR
Trigger: TCTCAGAGGGAACCCCAGTCAAGGCACAGGGAGACT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR TCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGGAACCTTGGCTGGCTaGGGGATGGCTGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLGTLAG*GMAVSL
Trigger: GAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCAGGAACCTTGGCTGGCTaGGGGATGGCTGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSGTLAG*GMAVSL
Trigger: GAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCC...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCAAAGGCCTGCTCCACTaGGGCCTCGGGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAKGLLH*GLGLLV
Trigger: CACCAAAAGCCCGAGGCCTCAGTGGAGCAGGCCTTT...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGAGCAACTTCCGTGCTaGCCCGTGTCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCEQLPC*PVSAPQ
Trigger: TTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGCACAAATACTCTCTTaGTGTCTCCTGCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGAQILS*CLLPPG
Trigger: ACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCCTGGAGACCTCACAGTaGTTCCAAACAGAGACCAAC +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRLETSQ*FQTETN
Trigger: GTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAG...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCAACAGACACCTTCTTaGTGCCCTGGCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCQQTPS*CPGSRS
Trigger: AGACCTGGAGCCAGGGCAGCAAGAAGGTGTCTGTTG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGAGGGGCAGGTCCTCTaGAGTTGCCATCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQEGQVL*SCHPHG
Trigger: ACCATGAGGATGGCAACTGCAGAGGACCTGCCCCTC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCAGAGGGGCAGGTCCTCTaGAGTTGCCATCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSEGQVL*SCHPHG
Trigger: ACCATGAGGATGGCAACTGCAGAGGACCTGCCCCTC...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACTTGGGTGGGGCCTCTaGTCCAGCCTCTTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKELGWGL*SSLFVP
Trigger: GGGGACGAAGAGGCTGGAGCAGAGGCCCCACCCAAG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCCTCACCCTGTCCAATaGTGTCCAAGGGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMPHPVQ*CPREGS
Trigger: AGACCCTTCCCTTGGACAGCATTGGACAGGGTGAGG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATCACCTCCGACTATCTaGTCTCTGCTAACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRSPPTI*SLLTEV
Trigger: GACCTCTGTTAGCAGAGAGCAGATAGTCGGAGGTGA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTTCTGTCGTTCCTGCTaGTCCCGTTGGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLFCRSC*SRWWII
Trigger: GATGATCCACCAACGGGAGCAGCAGGAACGACAGAA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGGGATCTCCACGCGGCTaGAGTATCTCACAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMGSPRG*SISQAV
Trigger: GACGGCCTGTGAGATACTGCAGCCGCGTGGAGATCC...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGTCTCTTGCATCCTGTTaGCTGAGGGGCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMSLASC*LRGSWA
Trigger: AGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGA...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGTCTCCTGGCTCTCTTaGATCCTGTTGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLVSWLS*ILLPEG
Trigger: CCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGAC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCAGGGTCCCCTCAGCTaGAGTCTCCTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVQGPLS*SLLALL
Trigger: CAAGAGAGCCAGGAGACTGCAGCTGAGGGGACCCTG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTTCCCACCGCAGACTGTaGAGGCCACTCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLSHRRL*RPLRSP
Trigger: AGGAGACCTGAGTGGCCTGCACAGTCTGCGGTGGGA...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTCCCACCGCAGACTGTaGAGGCCACTCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVSHRRL*RPLRSP
Trigger: AGGAGACCTGAGTGGCCTGCACAGTCTGCGGTGGGA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTGGGCTTCAGCTGTTaGCATCCGCAGACTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTLGFSC*HPQTLH
Trigger: ATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGACCTTTCTGGGGGCTaGTGGGATCCGGGGATCACT +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCDLSGG*WDPGIT
Trigger: AGTGATCCCCGGATCCCAGCAGCCCCCAGAAAGGTC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTAAGGCATTATGGGGGTaGGGGCTGGCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCKALWG*GLAPAA
Trigger: AGCTGCAGGTGCCAGCCCGCACCCCCATAATGCCTT...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTCTGGCCAGCAGGGCTaGTGTGGGAGTGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVSGQQG*CGSEEG
Trigger: CCCTTCTTCACTCCCACAGCAGCCCTGCTGGCCAGA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACTCTGGCCAGCAGGGCTaGTGTGGGAGTGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDSGQQG*CGSEEG
Trigger: CCCTTCTTCACTCCCACAGCAGCCCTGCTGGCCAGA...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGAACCTTCCATGGGCTaGTCTCCTGAGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIEPSMG*SPEGPG
Trigger: CCCCGGCCCCTCAGGAGAGCAGCCCATGGAAGGTTC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAAGCCTCCGCAGGGCCTaGACGTCCACACTGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKESLRRA*TSTLLA
Trigger: CGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCT...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCAATGTCCAGCAGCCTTaGCAAGGTCTGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRNVQQP*QGLFLQ
Trigger: CTGAAGGAACAGACCTTGGCAAGGCTGCTGGACATT...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGAGACATGGAGCTGAGTaGCTTGTGCACAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVRHGAE*LVHSLF
Trigger: GAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCT...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTTCTCTTGATGTCTCCTaGCTCCTGGTGGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTSLDVS*LLVEGA
Trigger: TGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGA...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATCCAGAACACTCTTTTaGCACCCTCTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGSRTLF*HPLGRG
Trigger: TCCCCTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGA...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGTCCAGAACACTCTTTTaGCACCCTCTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMSRTLF*HPLGRG
Trigger: TCCCCTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGA...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCTGGGTGGCTCTGCCTaGTCGGTGACTGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCLGGSA*SVTVVE
Trigger: TTCCACCACAGTCACCGAGCAGGCAGAGCCACCCAG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGTTCCTGGGTGGCTCTaGCTGCTCGGTGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDVPGWL*LLGDCG
Trigger: ACCACAGTCACCGAGCAGGCAGAGCCACCCAGGAAC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCAACCCAGCTGGGCTGTaGAGGAACTGCCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLNPAGL*RNCLSK
Trigger: CTTGCTGAGGCAGTTCCTGCACAGCCCAGCTGGGTT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCTGGCTGGGAGTAGCTaGAGGACACCTGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCLAGSS*RTPAPS
Trigger: AGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCTGGCTGGGAGTAGCTaGAGGACACCTGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLAGSS*RTPAPS
Trigger: AGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCTACCCCCACGCCTGTaGAACTCTGTGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLLPPRL*NSVGLF
Trigger: GAAGAGGCCCACAGAGTTGCACAGGCGTGGGGGTAG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTACCCCCACGCCTGTaGAACTCTGTGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDLPPRL*NSVGLF
Trigger: GAAGAGGCCCACAGAGTTGCACAGGCGTGGGGGTAG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGCTTCCCATTTGGGGTaGAGAGTGGGGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTASHLG*RVGDSH
Trigger: ATGACTGTCCCCCACTCTGCACCCCAAATGGGAAGC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCTTTATTCAGACCGTATaGTTCCCATTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TGLRLEARHGAECLVHSLFIQTV*FPFGVQ
Trigger: CTGCACCCCAAATGGGAAGCATACGGTCTGAATAAA...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGGAAGGATTCCTTGGGTaGCGGCAGTGGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMEGFLG*RQWQVL
Trigger: GAGGACCTGCCACTGCCGCCACCCAAGGAATCCTTC...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTACAGCACGGGCTCCTTaGCAGCTGGCCTCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLTARAP*QLASRV
Trigger: AACACGAGAGGCCAGCTGCCAAGGAGCCCGTGCTGT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTTGGCTGGGGCCTGGTTaGCTCCTGGTCTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCWLGPG*LLVCAV
Trigger: AACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCA...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCATAGTGTTGTGCCTCTGCATCCTGGATaGCACACAGGGGCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: GPPPHTVQSRFSWLHSVVPLHPG*HTGAPF
Trigger: AAACGGAGCCCCTGTGTGCCATCCAGGATGCAGAGG...CACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCTCACCGCGTTGCTTTaGATCTCCTCCCGGCATGCG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLTALL*ISSRHA
Trigger: CGCATGCCGGGAGGAGATCCAAAGCAACGCGGTGAG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCACCAAGATCTCCCGGATaGCATCCAGGGGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSPRSPG*HPGAVS
Trigger: AGACACAGCCCCTGGATGCCATCCGGGAGATCTTGG...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGGACCACTTCCTCCTTaGGTGGGGCCTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPGPLPP*VGPLLQ
Trigger: CTGGAGCAGAGGCCCCACCCAAGGAGGAAGTGGTCC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTGCCCCTCACCGTCCTaGGGATCCACTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPCPSPS*GSTRCR
Trigger: CCTACAGCGAGTGGATCCCCAGGACGGTGAGGGGCA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCTGCTTGGACTCCCATaGGCCAGAACCTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQLLGLP*ARTSPC
Trigger: ACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCTGCATGGCATACACTaGGGACCCTATGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLHGIH*GPYALG
Trigger: GCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCCTTGCTGTCCTGCATaGCATACACTGGGGACCCTA +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMPCCPA*HTLGTL
Trigger: TAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGTGCCTGAGGGGCTCATaGGCTGCTCTTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMCLRGS*AALPGG
Trigger: ACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCA...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTATGAGGATGCCTCCATaGTGCAGGATGCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTMRMPP*CRMPGV
Trigger: CACACCTGGCATCCTGCACCATGGAGGCATCCTCAT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTTGGAGCTGGCCAGTTaGGTCTTCCTGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQLELAS*VFLHQQ
Trigger: CTGCTGGTGCAGGAAGACCCAACTGGCCAGCTCCAA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGATGATGCTCTCAGTTaGGTGCAGGCTCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDDDALS*VQALGP
Trigger: GGGGCCCAGAGCCTGCACCCAACTGAGAGCATCATC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGGACTGCCTTTCCAATaGCCTGAGGAGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLGLPFQ*PEEGKG
Trigger: CCCCTTGCCCTCCTCAGGCCATTGGAAAGGCAGTCC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTTCCGAAGACCGTCCTaGATGGGGTTGGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCFRRPS*MGLEVA
Trigger: AGCCACTTCCAACCCCATCCAGGACGGTCTTCGGAA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGAGTCCTCAGCACGGTaGGCTCCAGCTGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQESSAR*APAGKS
Trigger: TGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCAGAGGCTTGCTGGATaGAGTCCTCAGCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCQRLAG*SPQHGG
Trigger: CCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACCTCCAGGGGTTCTCTaGCCAGCAGGGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEPPGVL*PAGLLW
Trigger: CCACAGCAGCCCTGCTGGCCAGAGAACCCCTGGAGG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCTGCGGCTTCTTCTTTaGGGGCATGGTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLRLLL*GHGGVQ
Trigger: CTGGACCCCACCATGCCCCCAAAGAAGAAGCCGCAG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCTCCGAGGAAAAGCTaGGAGATAGAGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTPPRKS*EIEARA
Trigger: AGCCCTTGCCTCTATCTCCCAGCTTTTCCTCGGAGG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGAGGTATGTGGCCCTaGTCTACAGTAGTGGGAACC +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLRGMWP*STVVGT
Trigger: GGTTCCCACTACTGTAGACCAGGGCCACATACCTCT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGCTGGCTATGTCCACTaGGACATCTGGCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGAGYVH*DIWPEV
Trigger: TACCTCTGGCCAGATGTCCCAGTGGACATAGCCAGC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGCTGGCTATGTCCACTaGGACATCTGGCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTAGYVH*DIWPEV
Trigger: TACCTCTGGCCAGATGTCCCAGTGGACATAGCCAGC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCTGTTGTAAGCTGGGCTaGCTATGTCCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGCCKLG*LCPLGH
Trigger: ATGTCCCAGTGGACATAGCCAGCCCAGCTTACAACA...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCTCTGGGCCTCAGTGTaGCATTCAACCTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMLWASV*HSTLAW
Trigger: CCAAGCCAAGGTTGAATGCCACACTGAGGCCCAGAG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCTCTGGGCCTCAGTGTaGCATTCAACCTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCLWASV*HSTLAW
Trigger: CCAAGCCAAGGTTGAATGCCACACTGAGGCCCAGAG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCACTGTGTTCCCAAACTaGTCCACCTCCTCATACTGT +
Preference number: 4 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSTVFPN*STSSYC
Trigger: ACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGT...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCACTGCTGAACCCAGCTaGGCTGTGCAGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLTAEPS*AVQELP
Trigger: AGGCAGTTCCTGCACAGCCCAGCTGGGTTCAGCAGT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTAACGCTGTGTCCAGTTaGCTCTGTTCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTNAVSS*LCSSPG
Trigger: CCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
3UTR CAA 72 bp GTGCCTTGTGCACAGCCTCTTCAATGTCCAGCAGCCTaGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCG +
Preference number: 4 (lower is better)
Translates to: VPCAQPLQCPAA*PRSVPSVEQLP
Trigger: CGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTGAAGAGGCTGTGCACAAGGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
3UTR CAA 72 bp TGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTaGATGTCTCCTGCCTCCTGGTGGAAGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WKVKPEEGTNTL*MSPASWWKGQL
Trigger: CAACTGCCCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTGTCGGCCATCCTTCTaGGAAGAAGGGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQCRPSF*EEGAEM
Trigger: CATCTCTGCCCCTTCTTCTCAGAAGGATGGCCGACA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCAGATGCTGCTGCTGCTaGACATCTGGACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVRCCCC*TSGPGG
Trigger: CCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTAGATGCTGCTGCTGCTaGACATCTGGACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCRCCCC*TSGPGG
Trigger: CCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCT...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAACGAGACACCTGCCCTaGAGGGATCTCCACGCGGCT +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKETRHLP*RDLHAA
Trigger: AGCCGCGTGGAGATCCCTTCAGGGCAGGTGTCTCGT...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCCTGGGAAGTTCACCTaGCACCAGCTCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDPGKFT*HQLLLS
Trigger: CGAAAGGAGGAGCTGGTGTCAGGTGAACTTCCCAGG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGCAGCCTCAGCGGCTTaGGTTGGAGCTGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIAASAA*VGAGQL
Trigger: CAACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGTGGGGGAACATGGATaGTGCTCTCAGTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLVGEHG*CSQLGA
Trigger: TGCACCCAACTGAGAGCATCATCCATGTTCCCCCAC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCTTTCTGTCCAGAGTaGCTGTCTTCCTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRPFCPE*LSSCFS
Trigger: AGAAAAGCAGGAAGACAGTCACTCTGGACAGAAAGG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCCTTTCTGTCCAGAGTaGCTGTCTTCCTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGPFCPE*LSSCFS
Trigger: AGAAAAGCAGGAAGACAGTCACTCTGGACAGAAAGG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGGAACCTTGGCTGGCTaGGGGATGGCTGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAGTLAG*GMAVSL
Trigger: GAGAGATACAGCCATCCCTCAGCCAGCCAAGGTTCC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGGGCCCCACTGTGGTaGGGTGGGATCATGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGAPLW*GGIMVE
Trigger: CTCAACCATGATCCCACCTCACCACAGTGGGGCCCC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCACAACAGACACCTTCTTaGTGCCCTGGCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSQQTPS*CPGSRS
Trigger: AGACCTGGAGCCAGGGCAGCAAGAAGGTGTCTGTTG...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACAGCCTTCCTCAAACTTaGGGGAGGTGGCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDSLPQT*GRWPGR
Trigger: ACGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCT...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCAGCATCCTGGTACCCTaGACATCTCCGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWASILVP*TSPLAA
Trigger: TGCAGCCAGCGGAGATGTGCAGGGTACCAGGATGCT...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCGGCCCTTGCTGTCCTaGATGGCATACACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPRPLLS*MAYTGD
Trigger: GTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCATAGTGTTGTGCCTGTTCTTCCTTCTTaGCTGCCTCCAGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GPPPHTVQSRFSWLHSVVPVLPS*LPPGPE
Trigger: TTCAGGCCCTGGAGGCAGGCAAGAAGGAAGAACAGG...CACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGTTGCCCCCTTGGATaGTCTCAGCTGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGCPLG*SQLPGS
Trigger: GCTCCCTGGCAGCTGAGAGCATCCAAGGGGGCAACC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCAGGATGCCTCCATGGTaGAGGATGCCAGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVRMPPW*RMPGVA
Trigger: TGCCACACCTGGCATCCTGCACCATGGAGGCATCCT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTCCAGTTGGGTCTTCCTaGACCAGCAGCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIPVGSS*TSSPCW
Trigger: CCAGCAGGGGCTGCTGGTGCAGGAAGACCCAACTGG...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTCCGCAAGCCAGCAGCTaGTGGAGCTCAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIPQASS*WSSGSM
Trigger: CATGGACCCTGAGCTCCAGCAGCTGCTGGCTTGCGG...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTATGCTCTCAGTTGGGTaGAGGCTCTGGGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIMLSVG*RLWAPS
Trigger: CGAGGGGGCCCAGAGCCTGCACCCAACTGAGAGCAT...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTCCTTCTCCAGGGCTTaGACCTGGTTCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPSFSRA*TWFRRP
Trigger: GGGCCTCCTGAACCAGGTGCAAGCCCTGGAGAAGGA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACCCTGAGCCAGTTGTGTaGTTTTCACTGAGACATCAG +
Preference number: 4 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYPEPVV*FSLRHQ
Trigger: CTGATGTCTCAGTGAAAAGCACACAACTGGCTCAGG...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTTTCCTCTTGGTCCTTaGTCCAGTGTACAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLFPLGP*SSVQEA
Trigger: TGCCTCCTGTACACTGGAGCAAGGACCAAGAGGAAA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCTGATGGGGTGTTTGTaGTCTGTAGCAGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCLMGCL*SVAAVV
Trigger: GACCACAGCTGCTACAGACCACAAACACCCCATCAG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTGCAAGGGTCTCTCTTaGCTGATGGGGTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCCKGLS*LMGCLW
Trigger: CCACAAACACCCCATCAGCCAAGAGAGACCCTTGCA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCACAGCAGGGTAGAGGCTaGATGCAAGGGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSQQGRG*MQGSLL
Trigger: CAAGAGAGACCCTTGCATCCAGCCTCTACCCTGCTG...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTTGGAGAAGGATTCCTTaGGTGGCGGCAGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLWRRIP*VAAVAG
Trigger: ACCTGCCACTGCCGCCACCCAAGGAATCCTTCTCCA...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTGGAGAAGGATTCCTTaGGTGGCGGCAGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAWRRIP*VAAVAG
Trigger: ACCTGCCACTGCCGCCACCCAAGGAATCCTTCTCCA...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGCTGCTGATGGAACTTaGAGAAGGATTCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLAADGT*RRIPWV
Trigger: CACCCAAGGAATCCTTCTCCAAGTTCCATCAGCAGC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCAAACTTGCGGGAGGTaGCCTGGACGTCACCACACA +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAQTCGR*PGRHHT
Trigger: TGTGTGGTGACGTCCAGGCCACCTCCCGCAAGTTTG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCAAACTTGCGGGAGGTaGCCTGGACGTCACCACACA +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCQTCGR*PGRHHT
Trigger: TGTGTGGTGACGTCCAGGCCACCTCCCGCAAGTTTG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGGCCTGGTTGGCTCCTaGTCTGTGCTGTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVGLVGS*SVLLAK
Trigger: CTTTGCCAACAGCACAGACCAGGAGCCAACCAGGCC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAAACGTCTCCTCCACCTaGCTGGGGCCTGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKENVSST*LGPGWL
Trigger: GAGCCAACCAGGCCCCAGCCAGGTGGAGGAGACGTT...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGCACAGGGGCTCCGTTTaGAAGAGCTTCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVHRGSV*KSFTVF
Trigger: AAAGACAGTGAAGCTCTTCCAAACGGAGCCCCTGTG...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCCAAGATCTCCCGGATaGCATCCAGGGGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLPRSPG*HPGAVS
Trigger: AGACACAGCCCCTGGATGCCATCCGGGAGATCTTGG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGGATAAGGTCTGGGGATaGCTGGAAGTCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PCQGLFLQLSNFRADPCQDKVWG*LEVLLI
Trigger: GATGAGAAGGACTTCCAGCCATCCCCAGACCTTATC...CTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCTGAGGAGCTGTCACTaGATAGATGCCCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMALRSCH*IDAPHR
Trigger: ACGGTGAGGGGCATCTATCCAGTGACAGCTCCTCAG...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGGGACCCTATGCCCTaGGCCTGCCCAGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGDPMP*ACPAES
Trigger: TGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCTGCATGGCATACACTaGGGACCCTATGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPLHGIH*GPYALG
Trigger: GCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGGCCTGTCCACAGGTTaGGGCTTGAACATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDGLSTG*GLNIQV
Trigger: CACCTGGATGTTCAAGCCCCAACCTGTGGACAGGCC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGCAGGATGCCAGGTGTaGCATGCAGAGTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIAGCQV*HAESAG
Trigger: CCCTGCGGACTCTGCATGCCACACCTGGCATCCTGC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCATGAGGATGCCTCCATaGTGCAGGATGCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLMRMPP*CRMPGV
Trigger: CACACCTGGCATCCTGCACCATGGAGGCATCCTCAT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTCAGCGGCTTGAGTTaGAGCTGGCCAGTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDLSGLS*SWPVGS
Trigger: AGACCCAACTGGCCAGCTCCAACTCAAGCCGCTGAG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTTCCAGTGGGGGAACATaGATGATGCTCTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTSSGGT*MMLSVG
Trigger: CCCAACTGAGAGCATCATCCATGTTCCCCCACTGGA...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTGTTTTGCAATTGGGCTaGTGCTGCAGCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMAVLQLG*CCSFPS
Trigger: GCTGGGGAAGCTGCAGCACCAGCCCAATTGCAAAAC...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCGTCCTGGATGGGGTTaGAAGTGGCTGTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPRPGWG*KWLLGW
Trigger: CCACCCCAACAGCCACTTCCAACCCCATCCAGGACG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTTCCGAAGACCGTCCTaGATGGGGTTGGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLFRRPS*MGLEVA
Trigger: AGCCACTTCCAACCCCATCCAGGACGGTCTTCGGAA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCTTTCTGGGGGCTGCTaGGATCCGGGGATCACTTCC +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPLSGGC*DPGITS
Trigger: GGAAGTGATCCCCGGATCCCAGCAGCCCCCAGAAAG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACCAGAGGCCAGAATGTaGCGGCCTAGAGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEPEARM*RPRGAV
Trigger: GACTGCCCCTCTAGGCCGCCACATTCTGGCCTCTGG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGGAACAAAGGCATTATaGGGGTGCGGGCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCGTKAL*GCGLAP
Trigger: AGGTGCCAGCCCGCACCCCCATAATGCCTTTGTTCC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCCTCCGAGGAAAAGCTaGGAGATAGAGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQPPRKS*EIEARA
Trigger: AGCCCTTGCCTCTATCTCCCAGCTTTTCCTCGGAGG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGAGTGGGAACCTTGGCTaGCTGAGGGATGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQSGNLG*LRDGCI
Trigger: GATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACT...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGCCATGTTGTAAGCTaGGCTGGCTATGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQGHVVS*AGYVHW
Trigger: CCAGTGGACATAGCCAGCCCAGCTTACAACATGGCC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACTCTCAGGGGCCCCTTaGTGGGAACCTTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKELSGAP*WEPSMG
Trigger: GCCCATGGAAGGTTCCCACCAAGGGGCCCCTGAGAG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCCCCTGGAGCTCTTTCTaGTTTCTTTGCAGACTGTCA +
Preference number: 4 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRPWSSF*FLCRLS
Trigger: TGACAGTCTGCAAAGAAACCAGAAAGAGCTCCAGGG...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAATCCAGGGCTTGCACCTaGTTCAGGAGGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKESRACT*FRRPWS
Trigger: GCTCCAGGGCCTCCTGAACCAGGTGCAAGCCCTGGA...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTTCCAGGGCTTGCACCTaGTTCAGGAGGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPISRACT*FRRPWS
Trigger: GCTCCAGGGCCTCCTGAACCAGGTGCAAGCCCTGGA...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCACTCTGGGCCTCAGTGTaGCATTCAACCTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSLWASV*HSTLAW
Trigger: CCAAGCCAAGGTTGAATGCCACACTGAGGCCCAGAG...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTATGTCTCCTGCCTCCTaGTGGAAGGGGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLMSPAS*WKGQLR
Trigger: CCTCAACTGCCCCTTCCACCAGGAGGCAGGAGACAT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATTCCCAGTTTTGTCTTaGACACCTTTCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRFPVLS*TPFWWS
Trigger: GCTCCACCAGAAAGGTGTCCAAGACAAAACTGGGAA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTACTGCTGAACCCAGCTaGGCTGTGCAGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCTAEPS*AVQELP
Trigger: AGGCAGTTCCTGCACAGCCCAGCTGGGTTCAGCAGT...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACTACCCACTTCAGTCCTaGGGCAGTGGAGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDYPLQS*GSGGQE
Trigger: TTCCTGGCCTCCACTGCCCCAGGACTGAAGTGGGTA...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGCGGCCAGGTCCTTCTaGAGACCTCACAGTGATTCC +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCAARSF*RPHSDS
Trigger: GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGAGCAAGGGTCTCTCTTaGCTGATGGGGTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMSKGLS*LMGCLW
Trigger: CCACAAACACCCCATCAGCCAAGAGAGACCCTTGCT...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS-3UTR TCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTAAGAAGGGGCAGAGATaGGGATGGGATTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLKKGQR*GWDWEP
Trigger: AGGCTCCCAATCCCATCCTCATCTCTGCCCCTTCTT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTTGGCTGTGGGATCTGTaGCCTCTGACCCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLWLWDL*PLTPAF
Trigger: AAAAGCAGGGGTCAGAGGTCACAGATCCCACAGCCA...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGTGGGGGAACATGGATaGTGCTCTCAGTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAVGEHG*CSQLGA
Trigger: TGCACCCAACTGAGAGCATCATCCATGTTCCCCCAC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCTTGCTCTTCCCTACTaGCCTTTCTGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPLALPY*PFWGLL
Trigger: CAGCAGCCCCCAGAAAGGTCAGTAGGGAAGAGCAAG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR TCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTTGTGTGCTTTTCACTaGGACATCAGGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLCAFH*DIRVAL
Trigger: AAGGGCAACCCTGATGTCTCAGTGAAAAGCACACAA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGCCTGGCCTATGTCCTaGGCCAGTTGTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLAWPMS*ASCVLF
Trigger: GAAAAGCACACAACTGGCTCAGGACATAGGCCAGGC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGAAGAACTGGGCCTATTaGAAGAACTGCGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGKNWAY*KNCERE
Trigger: TTCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTT...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCTGGAGACCTCACAGTaGTTCCAAACAGAGACCAAC +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCLETSQ*FQTETN
Trigger: GTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGACTTCTAGGGACATGCTaGTTGCTGACTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGLLGTC*LLTLWV
Trigger: CACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAG...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCAACAGACACCTTCTTaGTGCCCTGGCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVQQTPS*CPGSRS
Trigger: AGACCTGGAGCCAGGGCAGCAAGAAGGTGTCTGTTG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCAGGTCCTCTGCAGTTaGCATCCTCATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMAQVLCS*HPHGWC
Trigger: ACACCAACCATGAGGATGGCAACTGCAGAGGACCTG...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCCTCAGCCAGATTCTTaGGGAGCTCAGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAPQPDS*GAQGGC
Trigger: ACATCCACCCTGAGCTCCGCAAGAATCTGGCTGAGG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCAAAGATCCAGCGCATaGACTGAACGTCACCCTCGG +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDQRSSA*TERHPR
Trigger: CCGAGGGTGACGTTCAGTGCATGCGCTGGATCTTTG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTAGCATCCTGGTACCCTaGACATCTCCGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPSILVP*TSPLAA
Trigger: TGCAGCCAGCGGAGATGTGCAGGGTACCAGGATGCT...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCAGTTCCTTCTTCTCTaGTTGGACTCCCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQQFLLL*LDSHGP
Trigger: TGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTTCACCTCCGACTATCTaGTCTCTGCTAACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTSPPTI*SLLTEV
Trigger: GACCTCTGTTAGCAGAGAGCAGATAGTCGGAGGTGA...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGTGACCTCTGACCCCTaGTTTTCGGCCAACTCACTC +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVVTSDP*FSANSL
Trigger: GAGTGAGTTGGCCGAAAAGCAGGGGTCAGAGGTCAC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGTGACCTCTGACCCCTaGTTTTCGGCCAACTCACTC +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAVTSDP*FSANSL
Trigger: GAGTGAGTTGGCCGAAAAGCAGGGGTCAGAGGTCAC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCCTGTTCTTCCTTCTTaGCTGCCTCCAGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLPVLPS*LPPGPE
Trigger: TTCAGGCCCTGGAGGCAGGCAAGAAGGAAGAACAGG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCATAGTGTTGTGCTTCAATATTCCCACTaGTGCCTGGAGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPPPHTVQSRFSWLHSVVLQYSH*CLELAA
Trigger: GGCTGCCAACTCCAGGCAGCAGTGGGAATATTGAAG...CACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACCAACAGCTGCACGCTaGTCCTCTCAGAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEPTAAR*SSQRPC
Trigger: GCAAGGCCTCTGAGAGGAGCAGCGTGCAGCTGTTGG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCTGGGCTTCAGCTGTTaGCATCCGCAGACTCTGCAT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLLGFSC*HPQTLH
Trigger: ATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTTCAGAACTTGCTGGTaGAGGCTCTGGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLFRTCW*RLWASA
Trigger: AGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCATAGTGTTGTGTGCTTGTTCAGAACTTaGTGGTGCAGGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPPPHTVQSRFSWLHSVVCLFRT*WCRLWA
Trigger: AGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCA...CACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGTTGGGGTGGGGCCCTaGTTGTGCTTGTTCAGAACT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDVGVGP*LCLFRT
Trigger: AGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAAC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGTTTAGGGGGCAGCTaGGGCTTCTTCTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGLGGS*GFFFGG
Trigger: GCCCCCAAAGAAGAAGCCGCAGCTGCCCCCTAAACC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCCGTTGGTGTTCTCTTTaGCCCACCTCCGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLRWCSL*PTSEEK
Trigger: CTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGTCTTTCTGGTTTCTTTaGAGACTGTCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGSFWFL*RLSGLS
Trigger: TGAGAGCCCTGACAGTCTGCAAAGAAACCAGAAAGA...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGAGACATGGAGCTGAGTaGCTTGTGCACAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQRHGAE*LVHSLF
Trigger: GAAGAGGCTGTGCACAAGGCACTCAGCTCCATGTCT...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTTTCCTCTTGGTCCTTaGTCCAGTGTACAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCFPLGP*SSVQEA
Trigger: TGCCTCCTGTACACTGGAGCAAGGACCAAGAGGAAA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTTGGTTCTGTTCTGCTaGCTCCAACAGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLVLFC*LQQTPS
Trigger: AGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTTGCAAGGGTCTCTCTTaGCTGATGGGGTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMACKGLS*LMGCLW
Trigger: CCACAAACACCCCATCAGCCAAGAGAGACCCTTGCA...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCAGCAGGGTAGAGGCTaGATGCAAGGGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDQQGRG*MQGSLL
Trigger: CAAGAGAGACCCTTGCATCCAGCCTCTACCCTGCTG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATCTCAAAGAGCATCCTaGTACCCTGCACATCTCCGC +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSSQRAS*YPAHLR
Trigger: GCGGAGATGTGCAGGGTACCAGGATGCTCTTTGAGA...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCACAGGGGCTCCGTTTaGAAGAGCTTCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCHRGSV*KSFTVF
Trigger: AAAGACAGTGAAGCTCTTCCAAACGGAGCCCCTGTG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCAGGTGGGATAAGGTCTaGGGATGGCTGGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLRWDKV*GWLEVL
Trigger: AAGGACTTCCAGCCATCCCCAGACCTTATCCCACCT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCACTGCTGCTGAACATCTaGACCAGGTGGGATAAGGTC +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSLLLNI*TRWDKV
Trigger: GACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAG...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCTGAGGAGCTGTCACTaGATAGATGCCCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLRSCH*IDAPHR
Trigger: ACGGTGAGGGGCATCTATCCAGTGACAGCTCCTCAG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGTCCTTCTTCTCTGCTTaGACTCCCATGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQSFFSA*TPMGQN
Trigger: GTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGA...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCCTTGCTGTCCTGCATaGCATACACTGGGGACCCTA +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCPCCPA*HTLGTL
Trigger: TAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGGCCAACTCACTCATTaGGCAAGTCTCGAACAACCA +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGGQLTH*ASLEQP
Trigger: TGGTTGTTCGAGACTTGCCCAATGAGTGAGTTGGCC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTAGCCAAGTGAACTTGTaGACAGAACCCGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLSQVNL*TEPAGM
Trigger: CATCCCCGCGGGTTCTGTCCACAAGTTCACTTGGCT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCCTGCCAGGGAGCCCATaGGACAATTCTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLLPGSP*DNSQKA
Trigger: GGCTTTTTGAGAATTGTCCCATGGGCTCCCTGGCAG...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCCGAGAGCACATACTTaGCAAGACAGAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVPRAHT*QDRAPL
Trigger: CAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCTCGG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGCCGGCGCAGGACTTaGCAGATGATCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGRRRT*QMILGS
Trigger: ACTTCCCAGGATCATCTGCCAAGTCCTGCGCCGGCC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGATGATGCTCTCAGTTaGGTGCAGGCTCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEDDALS*VQALGP
Trigger: GGGGCCCAGAGCCTGCACCCAACTGAGAGCATCATC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGGACTGCCTTTCCAATaGCCTGAGGAGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEGLPFQ*PEEGKG
Trigger: CCCCTTGCCCTCCTCAGGCCATTGGAAAGGCAGTCC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGAAGACCGTCCTGGATaGGGTTGGAAGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAEDRPG*GWKWLL
Trigger: CAACAGCCACTTCCAACCCCATCCAGGACGGTCTTC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCCTCCGAGGAAAAGCTaGGAGATAGAGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAPPRKS*EIEARA
Trigger: AGCCCTTGCCTCTATCTCCCAGCTTTTCCTCGGAGG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCTGGCCAGAGGTATGTaGCCCTGGTCTACAGTAGTG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLARGM*PWSTVV
Trigger: CACTACTGTAGACCAGGGCCACATACCTCTGGCCAG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGGCCATGTTGTAAGCTaGGCTGGCTATGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCGHVVS*AGYVHW
Trigger: CCAGTGGACATAGCCAGCCCAGCTTACAACATGGCC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGGGCCATGTTGTAAGCTaGGCTGGCTATGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMGHVVS*AGYVHW
Trigger: CCAGTGGACATAGCCAGCCCAGCTTACAACATGGCC...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGGAGGTCCCTGGAAATaGCCTCTGGCACTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEGGPWK*PLALAS
Trigger: TGAGGCCAGTGCCAGAGGCCATTTCCAGGGACCTCC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCTTTTGGAGGTCCCTaGAAATGGCCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLSFGGP*KWPLAL
Trigger: CAGTGCCAGAGGCCATTTCCAGGGACCTCCAAAAGA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTTCTTTTGGAGGTCCCTaGAAATGGCCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMASFGGP*KWPLAL
Trigger: CAGTGCCAGAGGCCATTTCCAGGGACCTCCAAAAGA...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGGCACTGTGGTCTTTTaGAGGTCCCTGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCGTVVF*RSLEMA
Trigger: GGCCATTTCCAGGGACCTCCAAAAGACCACAGTGCC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCAATCTTGTGGGCACTGTaGTCTTTTGGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSILWAL*SFGGPW
Trigger: CCAGGGACCTCCAAAAGACCACAGTGCCCACAAGAT...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGAGGGAGAATCTCGGCTaGAAGGTAAAACCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQRENLG*KVKPEE
Trigger: CTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCT...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CTATGTCCACTGGGACATCTGGCCAGAGGTATGTGGCCCTGGTCTACAGTAGTGTTCCCAGTTTTGTCTTaGACACCTTTCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LCPLGHLARGMWPWSTVVFPVLS*TPFWWS
Trigger: GCTCCACCAGAAAGGTGTCCAAGACAAAACTGGGAA...CACTACTGTAGACCAGGGCCACATACCTCTGGCCAGATGTCCCAGTGGACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGTTGCACAGAGCACTaGGTGATGTCCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQGCTEH*VMSFFP
Trigger: TGGGAAGAAGGACATCACCCAGTGCTCTGTGCAACC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGTCACGGTTCTCATaGCTCCATAGTGTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTQSRFS*LHSVVS
Trigger: GCTCACAACACTATGGAGCCATGAGAACCGTGACTG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGGTAGAGGGACACTCTaGGGGGCTCCAATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPGRGTL*GAPIQA
Trigger: TGCCTGAATTGGAGCCCCCCAGAGTGTCCCTCTACC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTAGCTTGCCGCTGCTaGTGGAACTTGGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDLACRC*WNLEKD
Trigger: ATCCTTCTCCAAGTTCCATCAGCAGCGGCAAGCTAG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCTTGGACCTTGTCTCTaGAAGCATCCAGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWALGPCL*KHPGAL
Trigger: CAAAGCCCCTGGATGCTTTCAGAGACAAGGTCCAAG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACCACTTCCTGCCGGGTaGTGCCCCGCACCACGTCGA +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKPLPAG*CPAPRR
Trigger: TCGACGTGGTGCGGGGCATCACCCGGCAGGAAGTGG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTGGCTGTGGGATCTGTaGCCTCTGACCCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPWLWDL*PLTPAF
Trigger: AAAAGCAGGGGTCAGAGGTCACAGATCCCACAGCCA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGTCTGTTCCTTCAGTTaGGCAACTTCCGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLVCSFS*ATSVLT
Trigger: GGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGAC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGTCTGTTCCTTCAGTTaGGCAACTTCCGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAVCSFS*ATSVLT
Trigger: GGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGAC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCCTTGGCTTGGTTCTTaGCTGCAGTTTGACCTCCGA +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLPWLGS*LQFDLR
Trigger: TCGGAGGTCAAACTGCAGTCAAGAACCAAGCCAAGG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCAGCACAAATACTCTCTTaGTGTCTCCTGCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSAQILS*CLLPPG
Trigger: ACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGC...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGATCTCCTCCCGGCATaGGGCCTTGACCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIDLLPA*GLDLMD
Trigger: ATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACTTCTGTCGTTCCTGCTaGTCCCGTTGGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDFCRSC*SRWWII
Trigger: GATGATCCACCAACGGGAGCAGCAGGAACGACAGAA...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTAACCACCGGATGGTCTaGACATCGCCCTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPINHRMV*TSPFGG
Trigger: ACCCCCAAAGGGCGATGTGCAGACCATCCGGTGGTT...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGTCTCCTTTATCTATaGAGCTGGCCAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQGLLYL*SWPTAA
Trigger: TGCAGCTGTTGGCCAGCTGCATAGATAAAGGAGACC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGTGGGGCCCTGCTTGTaGTTGTTCAGAACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPVGPCL*LFRTCW
Trigger: CCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCAC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAAGGGGCTCAGAGGCTTaGTGGATGGAGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKERGSEA*WMESSA
Trigger: TGCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCT...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGAGCTGAGTGCCTTGTaGACAGCCTCTTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCELSAL*TASSMS
Trigger: GGACATTGAAGAGGCTGTGCACAAGGCACTCAGCTC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGAGCTGAGTGCCTTGTaGACAGCCTCTTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLELSAL*TASSMS
Trigger: GGACATTGAAGAGGCTGTGCACAAGGCACTCAGCTC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGGCTTGGTTCTTGACTaGAGTTTGACCTCCGACCTC +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDGLVLD*SLTSDL
Trigger: GAGGTCGGAGGTCAAACTGCAGTCAAGAACCAAGCC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCTGATGGGGTGTTTGTaGTCTGTAGCAGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCLMGCL*SVAAVV
Trigger: GACCACAGCTGCTACAGACCACAAACACCCCATCAG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAATGCCATCCTCATGGTTaGTGTGGGGGCCACCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKECHPHG*CGGHLC
Trigger: ACACAGGTGGCCCCCACACCAACCATGAGGATGGCA...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCCTGGTCTGTGCTGTTaGCAAAGGAGCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLPGLCC*QRSLPQ
Trigger: TTGAGGAAGGCTCCTTTGCCAACAGCACAGACCAGG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCAACATCTGGACCAGGTaGGATAAGGTCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVNIWTR*DKVWGW
Trigger: CCATCCCCAGACCTTATCCCACCTGGTCCAGATGTT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACAAGCCAGCAGCTGCTaGAGCTCAGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEQASSC*SSGSMS
Trigger: AGACATGGACCCTGAGCTCCAGCAGCTGCTGGCTTG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGTTTTGCAATTGGGCTaGTGCTGCAGCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPVLQLG*CCSFPS
Trigger: GCTGGGGAAGCTGCAGCACCAGCCCAATTGCAAAAC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGAGTCCTCAGCACGGTaGGCTCCAGCTGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEESSAR*APAGKS
Trigger: TGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCCTGGAGCTCTTTCTaGTTTCTTTGCAGACTGTCA +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTPWSSF*FLCRLS
Trigger: TGACAGTCTGCAAAGAAACCAGAAAGAGCTCCAGGG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTCTTTTGGAGGTCCCTaGAAATGGCCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWASFGGP*KWPLAL
Trigger: CAGTGCCAGAGGCCATTTCCAGGGACCTCCAAAAGA...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGTGACACTGATCTTGTaGGCACTGTGGTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTVTLIL*ALWSFG
Trigger: TCCAAAAGACCACAGTGCCCACAAGATCAGTGTCAC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTAGGGAGAATCTCGGCTaGAAGGTAAAACCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCRENLG*KVKPEE
Trigger: CTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCT...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGATGGAGATAAATGTTaGGGAGGAGGGAGAATCTCG +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMDGDKC*GGGRIS
Trigger: CGAGATTCTCCCTCCTCCCCAACATTTATCTCCATC...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTCCTTGTGGCCGACTaGATGGAGATAAATGTTGGG +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGFLVAD*MEINVG
Trigger: CCCAACATTTATCTCCATCCAGTCGGCCACAAGGAA...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGTAGAGGGACACTCTaGGGGGCTCCAATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGRGTL*GAPIQA
Trigger: TGCCTGAATTGGAGCCCCCCAGAGTGTCCCTCTACC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGGATTAAGGAGCAGATaGCTGGGAACACTCAGACTA +
Preference number: 4 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMGLRSR*LGTLRL
Trigger: TAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCC...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCTCAAAAAGCCAAGTaGACTTGTGGACAGAACCCG +
Preference number: 4 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLSQKAK*TCGQNP
Trigger: CGGGTTCTGTCCACAAGTTCACTTGGCTTTTTGAGA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTTTCTTGACTGCAGTTTaGCCTCCGACCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIFLTAV*PPTSWP
Trigger: AGGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAA...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGCACAAATACTCTCTTaGTGTCTCCTGCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVAQILS*CLLPPG
Trigger: ACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGCCTGGCCTATGTCCTaGGCCAGTTGTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEAWPMS*ASCVLF
Trigger: GAAAAGCACACAACTGGCTCAGGACATAGGCCAGGC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGCTGGAGACCTCACAGTaGTTCCAAACAGAGACCAAC +
Preference number: 4 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMLETSQ*FQTETN
Trigger: GTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAG...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCACCAGATGACCAGCTaGATGATGGAGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCHQMTS*MMEMVM
Trigger: CATCACCATCTCCATCATTCAGCTGGTCATCTGGTG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCTAGGGACATGCTaGTTGCTGACTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDLLGTC*LLTLWV
Trigger: CACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAATCGCCCTTTGGGGGTaGCTCAGGCTGGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKIALWG*LRLGVS
Trigger: GGAGACCCCCAGCCTGAGGCACCCCCAAAGGGCGAT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATGCTTTTCTGTGTTTTaGAATTGGGCTGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGCFSVF*NWAGAA
Trigger: TGCAGCACCAGCCCAATTGCAAAACACAGAAAAGCA...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCCTCTGGGTAGTGCTTaGTCTTCCCTACTGACCTTT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLPLGSA*SSLLTF
Trigger: AAAGGTCAGTAGGGAAGAGCAAGCACTACCCAGAGG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGATGAGCGGTGTAGATaGCATCCTGAATTGTCACCC +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVDERCR*HPELSP
Trigger: GGGTGACAATTCAGGATGGCATCTACACCGCTCATC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR GCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTCTTTCTGGTTTCTTTaGAGACTGTCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCSFWFL*RLSGLS
Trigger: TGAGAGCCCTGACAGTCTGCAAAGAAACCAGAAAGA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTAATGTCCAGCAGCCTTaGCAAGGTCTGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLNVQQP*QGLFLQ
Trigger: CTGAAGGAACAGACCTTGGCAAGGCTGCTGGACATT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCAATGTCCAGCAGCCTTaGCAAGGTCTGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVNVQQP*QGLFLQ
Trigger: CTGAAGGAACAGACCTTGGCAAGGCTGCTGGACATT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAATCCAGAACACTCTTTTaGCACCCTCTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKESRTLF*HPLGRG
Trigger: TCCCCTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGA...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGGTTCTTGTTCAAATTaGTTCTGTTCTGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGGSCSN*FCSAGS
Trigger: GGAGCCAGCAGAACAGAACCAATTTGAACAAGAACC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTGGTTCGTCGTTCCTCTaGAGGTTCTTGTTCAAATTG +
Preference number: 4 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCGSSFL*RFLFKL
Trigger: CAATTTGAACAAGAACCTCCAGAGGAACGACGAACC...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTTCACCCTTCAGCTCCTaGATCTCTGAGCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPISPFSS*ISERSS
Trigger: GGAACTGCGCTCAGAGATCCAGGAGCTGAAGGGTGA...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGGCCAACTCACTCATTaGGCAAGTCTCGAACAACCA +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLGQLTH*ASLEQP
Trigger: TGGTTGTTCGAGACTTGCCCAATGAGTGAGTTGGCC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTCTGTGTTTTGCAATTaGGCTGGTGCTGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVSVFCN*AGAAAS
Trigger: GGAAGCTGCAGCACCAGCCCAATTGCAAAACACAGA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGAAGACCGTCCTGGATaGGGTTGGAAGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIEDRPG*GWKWLL
Trigger: CAACAGCCACTTCCAACCCCATCCAGGACGGTCTTC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAATGCCATCGCCTTCCCTaGTGGCCCCCAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKCHRLP*WPPGHL
Trigger: CAGATGGCCTGGGGGCCACCAGGGAAGGCGATGGCA...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACTGGCCAGAGGTATGTaGCCCTGGTCTACAGTAGTG +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKELARGM*PWSTVV
Trigger: CACTACTGTAGACCAGGGCCACATACCTCTGGCCAG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTGTTGTAAGCTGGGCTaGCTATGTCCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWACCKLG*LCPLGH
Trigger: ATGTCCCAGTGGACATAGCCAGCCCAGCTTACAACA...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACTGGTTCAGGAGGCCCTaGAGCTCTTTCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDWFRRP*SSFWFL
Trigger: AAGAAACCAGAAAGAGCTCCAGGGCCTCCTGAACCA...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTTGATGTGGTTCAGGAGGCCCTaGAGCTCTTTCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ENLGWKVKPEEGTNTLLMWFRRP*SSFWFL
Trigger: AAGAAACCAGAAAGAGCTCCAGGGCCTCCTGAACCA...CATCAAGAGAGTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCAGTCACGGTTCTCATaGCTCCATAGTGTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLQSRFS*LHSVVS
Trigger: GCTCACAACACTATGGAGCCATGAGAACCGTGACTG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTCCATAGTGTTGTGGGATTAAGGAGCAGATaGCTGGGAACACTCAGACTA +
Preference number: 4 (lower is better)
Translates to: GPPPHTVQSRFSWLHSVVGLRSR*LGTLRL
Trigger: TAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCC...CACAACACTATGGAGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR TCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTCTAGCTTGCCGCTGCTaGTGGAACTTGGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPILACRC*WNLEKD
Trigger: ATCCTTCTCCAAGTTCCATCAGCAGCGGCAAGCTAG...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAATGGGGGCCGTGGTGCTaGGGCCATGTTGTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKWGPWC*GHVVSW
Trigger: CCAGCTTACAACATGGCCTCAGCACCACGGCCCCCA...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTTGTGTGCTTTTCACTaGGACATCAGGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWALCAFH*DIRVAL
Trigger: AAGGGCAACCCTGATGTCTCAGTGAAAAGCACACAA...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAATGCTCTCAGTTGGGTaGAGGCTCTGGGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKMLSVG*RLWAPS
Trigger: CGAGGGGGCCCAGAGCCTGCACCCAACTGAGAGCAT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAATGCTTGTTCAGAACTTaGTGGTGCAGGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKECLFRT*WCRLWA
Trigger: AGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCA...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTCCTGAGCCAGTTGTGTaGTTTTCACTGAGACATCAG +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLPEPVV*FSLRHQ
Trigger: CTGATGTCTCAGTGAAAAGCACACAACTGGCTCAGG...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGACAGAGAAAGGCAGTaGATTTGGCTTCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVDRERQ*IWLLGT
Trigger: TGTCCCTAGAAGCCAAATGCACTGCCTTTCTCTGTC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGACAGAGAAAGGCAGTaGATTTGGCTTCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWADRERQ*IWLLGT
Trigger: TGTCCCTAGAAGCCAAATGCACTGCCTTTCTCTGTC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGACAGAGAAAGGCAGTaGATTTGGCTTCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDDRERQ*IWLLGT
Trigger: TGTCCCTAGAAGCCAAATGCACTGCCTTTCTCTGTC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTTGGTTCTGTTCTGCTaGCTCCAACAGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLVLFC*LQQTPS
Trigger: AGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTGGTTCGTCGTTCCTCTaGAGGTTCTTGTTCAAATTG +
Preference number: 4 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMAGSSFL*RFLFKL
Trigger: CAATTTGAACAAGAACCTCCAGAGGAACGACGAACC...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAACTGCTGCTGAACATCTaGACCAGGTGGGATAAGGTC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKELLLNI*TRWDKV
Trigger: GACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAG...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTATCATCTCCAGGGGCTaGGTCTCAAAAAGCCACCGA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIIISRG*VSKSHR
Trigger: TCGGTGGCTTTTTGAGACCCAGCCCCTGGAGATGAT...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAAAGACAGAGCTCCCCTaGCCCTCGGGCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKKTELP*PSGLHE
Trigger: CTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCTT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGCCTTATGTTGCTTTaGGTAGCCCCAGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGLMLL*VAPAFR
Trigger: TCGGAAAGCTGGGGCTACCCAAAGCAACATAAGGCC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGTGACACTGATCTTGTaGGCACTGTGGTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLVTLIL*ALWSFG
Trigger: TCCAAAAGACCACAGTGCCCACAAGATCAGTGTCAC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGATGGAGATAAATGTTaGGGAGGAGGGAGAATCTCG +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDDGDKC*GGGRIS
Trigger: CGAGATTCTCCCTCCTCCCCAACATTTATCTCCATC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTTTCCCAGTTTTGTCTTaGACACCTTTCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLFPVLS*TPFWWS
Trigger: GCTCCACCAGAAAGGTGTCCAAGACAAAACTGGGAA...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGTTGCACAGAGCACTaGGTGATGTCCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGCTEH*VMSFFP
Trigger: TGGGAAGAAGGACATCACCCAGTGCTCTGTGCAACC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCAGTCACGGTTCTCATaGCTCCATAGTGTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPQSRFS*LHSVVS
Trigger: GCTCACAACACTATGGAGCCATGAGAACCGTGACTG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTTGTGTGCTTTTCACTaGGACATCAGGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPLCAFH*DIRVAL
Trigger: AAGGGCAACCCTGATGTCTCAGTGAAAAGCACACAA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACAAATTGGTTCTGTTCTaGTGGCTCCAACAGACACCT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDKLVLF*WLQQTP
Trigger: AGGTGTCTGTTGGAGCCAGCAGAACAGAACCAATTT...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACAGACCTCACCGCGTTaGTTTGGATCTCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKQTSPR*FGSPPG
Trigger: GCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCTG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGGTCTCCTTTATCTATaGAGCTGGCCAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIGLLYL*SWPTAA
Trigger: TGCAGCTGTTGGCCAGCTGCATAGATAAAGGAGACC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR GCA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTGCTTTTCTGTGTTTTaGAATTGGGCTGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVCFSVF*NWAGAA
Trigger: TGCAGCACCAGCCCAATTGCAAAACACAGAAAAGCA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAGAACGTCACCCTCGGTaGGTTCCTCAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKERHPR*VPQSPG
Trigger: TCCTGGGCTCTGAGGAACCCACCGAGGGTGACGTTC...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGATAAGGTCTGGGGATaGCTGGAAGTCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEDKVWG*LEVLLI
Trigger: GATGAGAAGGACTTCCAGCCATCCCCAGACCTTATC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTACTGTGTTCCCAAACTaGTCCACCTCCTCATACTGT +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPTVFPN*STSSYC
Trigger: ACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGT...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAATGGGGTCTTTGTCTGTaGCCCTCCAGGGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKWGLCL*PSRGSL
Trigger: CAGAGAACCCCTGGAGGGTCACAGACAAAGACCCCA...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTCTTTCTGGTTTCTTTaGAGACTGTCAGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPSFWFL*RLSGLS
Trigger: TGAGAGCCCTGACAGTCTGCAAAGAAACCAGAAAGA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTATTCAGGCAGTGGTGTaGAAATTCACACATGTCGAT +
Preference number: 4 (lower is better)
Translates to: AVHLASRDMLIADSLGDLIQAVV*KFTHVD
Trigger: ATCGACATGTGTGAATTTGCACACCACTGCCTGAAT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACATTCAGGCAGTGGTGTaGAAATTCACACATGTCGAT +
Preference number: 4 (lower is better)
Translates to: KAVHLASRDMLIADSLGDIQAVV*KFTHVD
Trigger: ATCGACATGTGTGAATTTGCACACCACTGCCTGAAT...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTTTATTCAGACCGTATaGTTCCCATTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPFIQTV*FPFGVQ
Trigger: CTGCACCCCAAATGGGAAGCATACGGTCTGAATAAA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGGTTCGTCGTTCCTCTaGAGGTTCTTGTTCAAATTG +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPGSSFL*RFLFKL
Trigger: CAATTTGAACAAGAACCTCCAGAGGAACGACGAACC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACAGTTGCCATCCTCATaGTTGGTGTGGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKQLPSS*LVWGPP
Trigger: AGGTGGCCCCCACACCAACCATGAGGATGGCAACTG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTCCCTGGAGCTCTTTCTaGTTTCTTTGCAGACTGTCA +
Preference number: 4 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIPWSSF*FLCRLS
Trigger: TGACAGTCTGCAAAGAAACCAGAAAGAGCTCCAGGG...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAATTCCTTGTGGCCGACTaGATGGAGATAAATGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEFLVAD*MEINVG
Trigger: CCCAACATTTATCTCCATCCAGTCGGCCACAAGGAA...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAGCGGCCAGGTCCTTCTaGAGACCTCACAGTGATTCC +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKAARSF*RPHSDS
Trigger: GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGC...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAAGGGTCTCTCTTGGCTaGTGGGGTGTTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKRVSLG*WGVCGL
Trigger: CAGACCACAAACACCCCATCAGCCAAGAGAGACCCT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAAAATTGGTTCTGTTCTaGTGGCTCCAACAGACACCT +
Preference number: 4 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEKLVLF*WLQQTP
Trigger: AGGTGTCTGTTGGAGCCAGCAGAACAGAACCAATTT...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTATTCAGGCAGTGGTGTaGAAATTCACACATGTCGAT +
Preference number: 4 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPIQAVV*KFTHVD
Trigger: ATCGACATGTGTGAATTTGCACACCACTGCCTGAAT...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAGCTTCCCATTTGGGGTaGAGAGTGGGGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKASHLG*RVGDSH
Trigger: ATGACTGTCCCCCACTCTGCACCCCAAATGGGAAGC...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACGAACAACCACCGGATaGTCTGCACATCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKRTTTG*SAHRPL
Trigger: CAAAGGGCGATGTGCAGACCATCCGGTGGTTGTTCG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAAGTGGGAACCTTGGCTaGCTGAGGGATGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKSGNLG*LRDGCI
Trigger: GATACAGCCATCCCTCAGCCAGCCAAGGTTCCCACT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAGCTGGCTATGTCCACTaGGACATCTGGCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKAGYVH*DIWPEV
Trigger: TACCTCTGGCCAGATGTCCCAGTGGACATAGCCAGC...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR TCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACTTGGACCTTGTCTCTaGAAGCATCCAGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKLGPCL*KHPGAL
Trigger: CAAAGCCCCTGGATGCTTTCAGAGACAAGGTCCAAG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAATCATCTCCAGGGGCTaGGTCTCAAAAAGCCACCGA +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKIISRG*VSKSHR
Trigger: TCGGTGGCTTTTTGAGACCCAGCCCCTGGAGATGAT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAAGAGGTATGTGGCCCTaGTCTACAGTAGTGGGAACC +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKRGMWP*STVVGT
Trigger: GGTTCCCACTACTGTAGACCAGGGCCACATACCTCT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR GCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAATTTCCTCTTGGTCCTTaGTCCAGTGTACAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKFPLGP*SSVQEA
Trigger: TGCCTCCTGTACACTGGAGCAAGGACCAAGAGGAAA...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAATCTGTGTTTTGCAATTaGGCTGGTGCTGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKSVFCN*AGAAAS
Trigger: GGAAGCTGCAGCACCAGCCCAATTGCAAAACACAGA...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR TCA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAAAGAACTGGGCCTATTaGAAGAACTGCGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKKNWAY*KNCERE
Trigger: TTCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTT...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS GCA 90 bp TCACCCTTCAGCTCCTGGATCTCTGAGCGCAGTTCCAAGGGGCTCTaGTCCTGCAGGGAGGGGCGGGAGCCCAGGCGGTCCAGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: SPFSSWISERSSKGL*SCREGREPRRSSGR
Trigger: GCGGCCGCTGGACCGCCTGGGCTCCCGCCCCTCCCTGCAGGAGCAGAGCCCCTTGGAACTGCGCTCAGAGATCCAGGAGCTGAAGGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GGCGGGAGCCCAGGCGGTCCAGCGGCCGCGTCTCAAAGAGCATCCTaGTACCCTGCACATCTCCGCTGGCTGCAGGCTCCCTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: GGSPGGPAAASQRAS*YPAHLRWLQAPSQW
Trigger: CCACTGTGAGGGAGCCTGCAGCCAGCGGAGATGTGCAGGGTACCAGGATGCTCTTTGAGACGCGGCCGCTGGACCGCCTGGGCTCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp CCCAGGCGGTCCAGCGGCCGCGTCTCAAAGAGCATCCTGGTACCCTaGACATCTCCGCTGGCTGCAGGCTCCCTCACAGTGGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PRRSSGRVSKSILVP*TSPLAAGSLTVASS
Trigger: ACTGGAGGCCACTGTGAGGGAGCCTGCAGCCAGCGGAGATGTGCAGGGTACCAGGATGCTCTTTGAGACGCGGCCGCTGGACCGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp CAGAGCTCCCCTGGCCCTCGGGCCTCCATGAGGATGCCTCCATGGTaGAGGATGCCAGGTGTGGCATGCAGAGTCCGCAGGGTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: QSSPGPRASMRMPPW*RMPGVACRVRRVPS
Trigger: TGAGGGGACCCTGCGGACTCTGCATGCCACACCTGGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GGCAGCCTCAGCGGCTTGAGTTGGAGCTGGCCAGTTGGGTCTTCCTaGACCAGCAGCCCCTGCTGGTCCACATCTGGCCGGCGCAGGACT +
Preference number: 5 (lower is better)
Translates to: GSLSGLSWSWPVGSS*TSSPCWSTSGRRRT
Trigger: AGTCCTGCGCCGGCCAGATGTGGACCAGCAGGGGCTGCTGGTGCAGGAAGACCCAACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GGCCGGGTCTCAAAGAGCCAGCGGGCAGACCTCACCGCGTTGCTTTaGATCTCCTCCCGGCATGCGGCCTTGACCTCATGGATGGCGCCC +
Preference number: 5 (lower is better)
Translates to: GRVSKSQRADLTALL*ISSRHAALTSWMAP
Trigger: GGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCTGCCCGCTGGCTCTTTGAGACCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp AGACAGAGCTCCCCTGGCCCTCGGGCCTCCATGAGGATGCCTCCATaGTGCAGGATGCCAGGTGTGGCATGCAGAGTCCGCAGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: RQSSPGPRASMRMPP*CRMPGVACRVRRVP
Trigger: GGGGACCCTGCGGACTCTGCATGCCACACCTGGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp CCAGCGGGCAGACCTCACCGCGTTGCTTTGGATCTCCTCCCGGCATaGGGCCTTGACCTCATGGATGGCGCCCTCTGCATCCTGGATGGC +
Preference number: 5 (lower is better)
Translates to: PAGRPHRVALDLLPA*GLDLMDGALCILDG
Trigger: GCCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCTGCCCGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GCCCAGAGGCCAGAATGTGGCGGCCTAGAGGGGCAGTCTTCAGGGTaGTCTCTGCAGCTTGGAGGCCCCCTGGGCAGACTTCTGCCATCG +
Preference number: 5 (lower is better)
Translates to: AQRPECGGLEGQSSG*SLQLGGPLGRLLPS
Trigger: CGATGGCAGAAGTCTGCCCAGGGGGCCTCCAAGCTGCAGAGACCACCCTGAAGACTGCCCCTCTAGGCCGCCACATTCTGGCCTCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS-3UTR CAA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCTCCCGGCATGCGGCCTaGACCTCATGGATGGCGCCC +
Preference number: 5 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFSRHAA*TSWMAP
Trigger: GGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGA...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS GCA 90 bp CCAGGACCTCAGCCAGATCCTCGGCCACAGCCTCAGCCAGATTCTTaGGGAGCTCAGGGTGGATGTGCCTGTAGAGGCGGCGGAGCTCAC +
Preference number: 5 (lower is better)
Translates to: PGPQPDPRPQPQPDS*GAQGGCACRGGGAH
Trigger: GTGAGCTCCGCCGCCTCTACAGGCACATCCACCCTGAGCTCCGCAAGAATCTGGCTGAGGCTGTGGCCGAGGATCTGGCTGAGGTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GGGTGGAGGGAGGGGCAGGTCCTCTGCAGTTGCCATCCTCATGGTTaGTGTGGGGGCCACCTGTGTCTGGGTGTCGGCCATCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: GWREGQVLCSCHPHG*CGGHLCLGVGHPSE
Trigger: CTCAGAAGGATGGCCGACACCCAGACACAGGTGGCCCCCACACCAACCATGAGGATGGCAACTGCAGAGGACCTGCCCCTCCCTCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp AGCCGGGACCTGGCTAACCTGCAGGTGCTGCTCCCTGGAGCCCACTaGCCTGTCCACAGGTTGGGGCTTGAACATCCAGGTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: SRDLANLQVLLPGAH*PVHRLGLEHPGAGL
Trigger: CAGTCCTGCACCTGGATGTTCAAGCCCCAACCTGTGGACAGGCCAGTGGGCTCCAGGGAGCAGCACCTGCAGGTTAGCCAGGTCCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CTGCCCTGTGCCCGAGAGCACATACTTGGCAAGACAGAGCTCCCCTaGCCCTCGGGCCTCCATGAGGATGCCTCCATGGTGCAGGATGCC +
Preference number: 5 (lower is better)
Translates to: LPCAREHILGKTELP*PSGLHEDASMVQDA
Trigger: GGCATCCTGCACCATGGAGGCATCCTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCTCGGGCACAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGCTCCAGTTCCTTGGCTaGCCCTGTCAGCTCGTCCAG +
Preference number: 5 (lower is better)
Translates to: KSLRRACTSTLLAASFSRLQFLG*PCQLVQ
Trigger: CTGGACGAGCTGACAGGGCAAGCCAAGGAACTGGAG...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCCAGGGGCTCAGAGGCTaGCTGGATGGAGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ATSVLTRVSSPKACSTEAQGLRG*LDGVLS
Trigger: GCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCTG...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS GCA 90 bp TCTCTGCTAACAGAGGTCAGGGCATGGAGGCGGCCCTTGCTGTCCTaGATGGCATACACTGGGGACCCTATGCCCTGGGCCTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: SLLTEVRAWRRPLLS*MAYTGDPMPWACPA
Trigger: TGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGTTAGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp TGCAGAGTCCGCAGGGTCCCCTCAGCTGCAGTCTCCTGGCTCTCTTaGATCCTGTTGCCTGAGGGGCTCATGGGCTGCTCTTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: CRVRRVPSAAVSWLS*ILLPEGLMGCSSRR
Trigger: CCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGACTGCAGCTGAGGGGACCCTGCGGACTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GCCTCCATGAGGATGCCTCCATGGTGCAGGATGCCAGGTGTGGCATaGAGAGTCCGCAGGGTCCCCTCAGCTGCAGTCTCCTGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: ASMRMPPWCRMPGVA*RVRRVPSAAVSWLS
Trigger: AGAGAGCCAGGAGACTGCAGCTGAGGGGACCCTGCGGACTCTGCATGCCACACCTGGCATCCTGCACCATGGAGGCATCCTCATGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GTGCTTGTTCAGAACTTGCTGGTGCAGGCTCTGGGCTTCAGCTGTTaGCATCCGCAGACTCTGCATGGCGGCCAGGAGGTCTGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: VLVQNLLVQALGFSC*HPQTLHGGQEVWGP
Trigger: GGGGCCCCAGACCTCCTGGCCGCCATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GGTCTGTGCTGTTGGCAAAGGAGCCTTCCTCAAACTTGCGGGAGGTaGCCTGGACGTCACCACACAGCACGGGCTCCTTGGCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GLCCWQRSLPQTCGR*PGRHHTARAPWQLA
Trigger: GGCCAGCTGCCAAGGAGCCCGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCTCCTTTGCCAACAGCACAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GGTCAGGGCATGGAGGCGGCCCTTGCTGTCCTGCATGGCATACACTaGGGACCCTATGCCCTGGGCCTGCCCAGCAGAATCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GQGMEAALAVLHGIH*GPYALGLPSRISSF
Trigger: GAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GGTGTGGCATGCAGAGTCCGCAGGGTCCCCTCAGCTGCAGTCTCCTaGCTCTCTTGCATCCTGTTGCCTGAGGGGCTCATGGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GVACRVRRVPSAAVS*LSCILLPEGLMGCS
Trigger: AGAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGACTGCAGCTGAGGGGACCCTGCGGACTCTGCATGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGGCGGAGCTCACTAGCTaGCCGCTGCTGATGGAACTT +
Preference number: 5 (lower is better)
Translates to: KSLRRACTSTLLAASFSRAELTS*PLLMEL
Trigger: AAGTTCCATCAGCAGCGGCAAGCTAGTGAGCTCCGC...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCCTGGCTGGGGCCTGGTaGGCTCCTGGTCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: TGLRLEARHGAECLVHSLLAGAW*APGLCC
Trigger: ACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCAG...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTGCATGGAGGCGGCCCTaGCTGTCCTGCATGGCATAC +
Preference number: 5 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCAWRRP*LSCMAY
Trigger: GTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGC...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCCCGTATGCTTCCCATTaGGGGTGCAGAGTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: ATSVLTRVSSPKACSTEAPYASH*GCRVGD
Trigger: GTCCCCCACTCTGCACCCCAAATGGGAAGCATACGG...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS GCA 90 bp CCGCTGGCTGCAGGCTCCCTCACAGTGGCCTCCAGTTCCTTGGCTTaGCCTGTCAGCTCGTCCAGTGGCTTTGTCTCAAATAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: PLAAGSLTVASSSLA*PVSSSSGFVSNSQR
Trigger: CCGCTGGCTATTTGAGACAAAGCCACTGGACGAGCTGACAGGGCAAGCCAAGGAACTGGAGGCCACTGTGAGGGAGCCTGCAGCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GATCTCCTCCCGGCATGCGGCCTTGACCTCATGGATGGCGCCCTCTaGATCCTGGATGGCACACAGGGGCTCCGTTTGGAAGAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: DLLPACGLDLMDGAL*ILDGTQGLRLEELH
Trigger: GTGAAGCTCTTCCAAACGGAGCCCCTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp CCTCTTTCTGACGAGACACCTGCCCTGAAGGGATCTCCACGCGGCTaGAGTATCTCACAGGCCGTCTTCCACAGGGACGGCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLSDETPALKGSPRG*SISQAVFHRDGLRP
Trigger: AGGCCTCAGGCCGTCCCTGTGGAAGACGGCCTGTGAGATACTGCAGCCGCGTGGAGATCCCTTCAGGGCAGGTGTCTCGTCAGAAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GTCTCCTGGCTCTCTTGCATCCTGTTGCCTGAGGGGCTCATGGGCTaGTCTTCCAGGAGGTTGCCCCCTTGGATGCTCTCAGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VSWLSCILLPEGLMG*SSRRLPPWMLSAAR
Trigger: CCTGGCAGCTGAGAGCATCCAAGGGGGCAACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp TTGAGTTGGAGCTGGCCAGTTGGGTCTTCCTGCACCAGCAGCCCCTaGTGGTCCACATCTGGCCGGCGCAGGACTTGGCAGATGATCCTG +
Preference number: 5 (lower is better)
Translates to: LSWSWPVGSSCTSSP*WSTSGRRRTWQMIL
Trigger: CAGGATCATCTGCCAAGTCCTGCGCCGGCCAGATGTGGACCAGCAGGGGCTGCTGGTGCAGGAAGACCCAACTGGCCAGCTCCAACTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp ACTTGCGGGAGGTGGCCTGGACGTCACCACACAGCACGGGCTCCTTaGCAGCTGGCCTCTCGTGTTCTCCAATGGCATCCAGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: TCGRWPGRHHTARAP*QLASRVLQWHPVSS
Trigger: ACTGGAGACTGGATGCCATTGGAGAACACGAGAGGCCAGCTGCCAAGGAGCCCGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GCTGCACGAACGTCTCCTCCACCTGGCTGGGGCCTGGTTGGCTCCTaGTCTGTGCTGTTGGCAAAGGAGCCTTCCTCAAACTTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: AARTSPPPGWGLVGS*SVLLAKEPSSNLRE
Trigger: CTCCCGCAAGTTTGAGGAAGGCTCCTTTGCCAACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCAGGTGGAGGAGACGTTCGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CCAGCGGGCTGCACGAACGTCTCCTCCACCTGGCTGGGGCCTGGTTaGCTCCTGGTCTGTGCTGTTGGCAAAGGAGCCTTCCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: PAGCTNVSSTWLGPG*LLVCAVGKGAFLKL
Trigger: AAGTTTGAGGAAGGCTCCTTTGCCAACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCAGGTGGAGGAGACGTTCGTGCAGCCCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GTCTCAAATAGCCAGCGGGCTGCACGAACGTCTCCTCCACCTGGCTaGGGCCTGGTTGGCTCCTGGTCTGTGCTGTTGGCAAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: VSNSQRAARTSPPPG*GLVGSWSVLLAKEP
Trigger: AGGCTCCTTTGCCAACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCAGGTGGAGGAGACGTTCGTGCAGCCCGCTGGCTATTTGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp ATAGCCACAGGGTGGAGCGGACATCACCAGGGACCACTTCCTCCTTaGGTGGGGCCTCTGCTCCAGCCTCTTCGTCCCCCTTCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: IATGWSGHHQGPLPP*VGPLLQPLRPPSEC
Trigger: ACACTCTGAAGGGGGACGAAGAGGCTGGAGCAGAGGCCCCACCCAAGGAGGAAGTGGTCCCTGGTGATGTCCGCTCCACCCTGTGGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GTGGGGCCCTGCTTGTGCTTGTTCAGAACTTGCTGGTGCAGGCTCTaGGCTTCAGCTGTTGCCATCCGCAGACTCTGCATGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VGPCLCLFRTCWCRL*ASAVAIRRLCMAAR
Trigger: CCTGGCCGCCATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCTCCCGGCATGCGGCCTaGACCTCATGGATGGCGCCC +
Preference number: 5 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGSRHAA*TSWMAP
Trigger: GGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGA...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCGGGCCCTGCTTGTGCTaGTTCAGAACTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: ATSVLTRVSSPKACSTEAGPCLC*FRTCWC
Trigger: GCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCC...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGCTCTCAGGGGCCCCTaGGTGGGAACCTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSALRGP*VGTFHG
Trigger: CCCATGGAAGGTTCCCACCAAGGGGCCCCTGAGAGC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CTGGGGGCCGTGGTGCTGAGGCCATGTTGTAAGCTGGGCTGGCTATGTCCACTGTGGTGGAAGGGGCAGTaGAGGCTGTGTGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: LGAVVLRPCCKLGWLCPLWWKGQ*RLCDLW
Trigger: CCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCA...CAGTGGACATAGCCAGCCCAGCTTACAACATGGCCTCAGCACCACGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCCTGCTCCACTGAGGCCCAACGCTGTGTCCAGTaGGCTCTGTTCCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ATSVLTRVSSPKACSTEAQRCVQ*ALFLSR
Trigger: CCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTG...GGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS TCA 90 bp CACGCGGCTGCAGTATCTCACAGGCCGTCTTCCACAGGGACGGCCTaGGGCCTGAAGAGGCTCGGTCTCAAAGACGTGTCTGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: HAAAVSHRPSSTGTA*GLKRLGLKDVSVCL
Trigger: CAGACAGACAGACACGTCTTTGAGACCGAGCCTCTTCAGGCCTCAGGCCGTCCCTGTGGAAGACGGCCTGTGAGATACTGCAGCCGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 90 bp TGGACTGAGAGGGCAGTCTCCCTGTGCCTTGACTGGGGTTCCCTCTaGGAAAGCTGGACACCCCCAGGTGGGTCAAAGGTCCTCACGGGA +
Preference number: 5 (lower is better)
Translates to: WTERAVSLCLDWGSL*ESWTPPGGSKVLTG
Trigger: TCCCGTGAGGACCTTTGACCCACCTGGGGGTGTCCAGCTTTCTCAGAGGGAACCCCAGTCAAGGCACAGGGAGACTGCCCTCTCAGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS GCA 90 bp TTGGCTCCTGGTCTGTGCTGTTGGCAAAGGAGCCTTCCTCAAACTTaGGGGAGGTGGCCTGGACGTCACCACACAGCACGGGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LAPGLCCWQRSLPQT*GRWPGRHHTARAPW
Trigger: CCAAGGAGCCCGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCTCCTTTGCCAACAGCACAGACCAGGAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GGAGGCGGCCCTTGCTGTCCTGCATGGCATACACTGGGGACCCTATaGCCTGGGCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GGGPCCPAWHTLGTL*PGPAQQNQFLLLCL
Trigger: CAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GCTCCCACCGCAGACTGTGCAGGCCACTCAGGTCTCCTTTATCTATaGAGCTGGCCAACAGCTGCACGCTGCTCCTCTCAGAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: APTADCAGHSGLLYL*SWPTAARCSSQRPC
Trigger: GCAAGGCCTCTGAGAGGAGCAGCGTGCAGCTGTTGGCCAGCTGCATAGATAAAGGAGACCTGAGTGGCCTGCACAGTCTGCGGTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CTGCAGTCTCCTGGCTCTCTTGCATCCTGTTGCCTGAGGGGCTCATaGGCTGCTCTTCCAGGAGGTTGCCCCCTTGGATGCTCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LQSPGSLASCCLRGS*AALPGGCPLGCSQL
Trigger: CAGCTGAGAGCATCCAAGGGGGCAACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGACTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GTGGCTGTTGGGGTGGGGCCCTGCTTGTGCTTGTTCAGAACTTGCTaGTGCAGGCTCTGGGCTTCAGCTGTTGCCATCCGCAGACTCTGC +
Preference number: 5 (lower is better)
Translates to: VAVGVGPCLCLFRTC*CRLWASAVAIRRLC
Trigger: GCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAACAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CTCAGAGGCTTGCTGGATGGAGTCCTCAGCACGGTGGGCTCCAGCTaGAAAGTCAGGTCCTGTCACAGCAGCTGGGAGAGTAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LRGLLDGVLSTVGSS*KVRSCHSSWESRRR
Trigger: CCTCCTCCTACTCTCCCAGCTGCTGTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS CCA 90 bp TCCTTCAGGGGCTCAGAGGCTTGCTGGATGGAGTCCTCAGCACGGTaGGCTCCAGCTGGAAAGTCAGGTCCTGTCACAGCAGCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SFRGSEACWMESSAR*APAGKSGPVTAAGR
Trigger: TCTCCCAGCTGCTGTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS CCA 90 bp TCCTTCAGGGGCTCAGAGGCTTGCTGGATGGAGTCCTCAGCACGGTaGGCTCCAGCTGGAAAGTCAGGTCCTGTCACAGCAGCAAGGGTC +
Preference number: 5 (lower is better)
Translates to: SFRGSEACWMESSAR*APAGKSGPVTAARV
Trigger: GACCCTTGCTGCTGTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS-3UTR CAA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGATGCAAGGGTCTCTCTaGGCTGATGGGGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: KSLRRACTSTLLAASFSRMQGSL*ADGVFV
Trigger: CACAAACACCCCATCAGCCAAGAGAGACCCTTGCAT...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGACACAGGGGCTCCGTTaGGAAGAGCTTCACTGTCTT +
Preference number: 5 (lower is better)
Translates to: KSLRRACTSTLLAASFSRTQGLR*EELHCL
Trigger: AAGACAGTGAAGCTCTTCCAAACGGAGCCCCTGTGT...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCGGGACCACTTCCTCCTaGGGTGGGGCCTCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGGTTSS*GGASAP
Trigger: TGGAGCAGAGGCCCCACCCAAGGAGGAAGTGGTCCC...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACGGGACCACTTCCTCCTaGGGTGGGGCCTCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYGTTSS*GGASAP
Trigger: TGGAGCAGAGGCCCCACCCAAGGAGGAAGTGGTCCC...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCTGGCCGGCGCAGGACTaGGCAGATGATCCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSWPAQD*ADDPGK
Trigger: CTTCCCAGGATCATCTGCCAAGTCCTGCGCCGGCCA...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGGCACGTCCACACTGCTaGCGGCCTCCTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGARPHC*RPPSPG
Trigger: CCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGC...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCAGGGGCAGGTTCAGGTaGCACAGAGCACTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFRGRFR*HRALGD
Trigger: ATCACCCAGTGCTCTGTGCAACCTGAACCTGCCCCT...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS GCA 90 bp CTGACACCAGCTCCTCCTTTCGTATATAAGGGTGCCCCTGCCCTGTaGCCGAGAGCACATACTTGGCAAGACAGAGCTCCCCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LTPAPPFVYKGAPAL*PRAHTWQDRAPLAL
Trigger: GAGGGCCAGGGGAGCTCTGTCTTGCCAAGTATGTGCTCTCGGGCACAGGGCAGGGGCACCCTTATATACGAAAGGAGGAGCTGGTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp AGCCCAGTCCTTGCCACGGAGGTCCCAAGACCGCAAGCCAGCAGCTaGTGGAGCTCAGGGTCCATGTCTTCAATATTCCCACTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SPVLATEVPRPQASS*WSSGSMSSIFPLLP
Trigger: AGGCAGCAGTGGGAATATTGAAGACATGGACCCTGAGCTCCAGCAGCTGCTGGCTTGCGGTCTTGGGACCTCCGTGGCAAGGACTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GCTGTTGGGGTGGGGCCCTGCTTGTGCTTGTTCAGAACTTGCTGGTaGAGGCTCTGGGCTTCAGCTGTTGCCATCCGCAGACTCTGCATG +
Preference number: 5 (lower is better)
Translates to: AVGVGPCLCLFRTCW*RLWASAVAIRRLCM
Trigger: CATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp GAAGTGGCTGTTGGGGTGGGGCCCTGCTTGTGCTTGTTCAGAACTTaGTGGTGCAGGCTCTGGGCTTCAGCTGTTGCCATCCGCAGACTC +
Preference number: 5 (lower is better)
Translates to: EVAVGVGPCLCLFRT*WCRLWASAVAIRRL
Trigger: GAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAACAGCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp TCCCGGCATGCGGCCTTGACCTCATGGATGGCGCCCTCTGCATCCTaGATGGCACACAGGGGCTCCGTTTGGAAGAGCTTCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SRHAALTSWMAPSAS*MAHRGSVWKSFTVF
Trigger: AAAGACAGTGAAGCTCTTCCAAACGGAGCCCCTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CGGCCCTTGCTGTCCTGCATGGCATACACTGGGGACCCTATGCCCTaGGCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTGCTTGGACTC +
Preference number: 5 (lower is better)
Translates to: RPLLSCMAYTGDPMP*ACPAESVPSSLLGL
Trigger: GAGTCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp TTTCGGCCAACTCACTCATTGGGCAAGTCTCGAACAACCACCGGATaGTCTGCACATCGCCCTTTGGGGGTGCCTCAGGCTGGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: FRPTHSLGKSRTTTG*SAHRPLGVPQAGGL
Trigger: GAGACCCCCAGCCTGAGGCACCCCCAAAGGGCGATGTGCAGACCATCCGGTGGTTGTTCGAGACTTGCCCAATGAGTGAGTTGGCCGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CCAGTCCTTGCCACGGAGGTCCCAAGACCGCAAGCCAGCAGCTGCTaGAGCTCAGGGTCCATGTCTTCAATATTCCCACTGCTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PVLATEVPRPQASSC*SSGSMSSIFPLLPG
Trigger: TCCAGGCAGCAGTGGGAATATTGAAGACATGGACCCTGAGCTCCAGCAGCTGCTGGCTTGCGGTCTTGGGACCTCCGTGGCAAGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CCCAGCTTTCCGAAGACCGTCCTGGATGGGGTTGGAAGTGGCTGTTaGGGTGGGGCCCTGCTTGTGCTTGTTCAGAACTTGCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PSFPKTVLDGVGSGC*GGALLVLVQNLLVQ
Trigger: CTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAACAGCCACTTCCAACCCCATCCAGGACGGTCTTCGGAAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CTCAGAGGCTTGCTGGATGGAGTCCTCAGCACGGTGGGCTCCAGCTaGAAAGTCAGGTCCTGTCACAGCAGCAAGGGTCTCTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LRGLLDGVLSTVGSS*KVRSCHSSKGLSWL
Trigger: CAGCCAAGAGAGACCCTTGCTGCTGTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS-3UTR CAA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGCCTCAGCCAGATTCTaGCGGAGCTCAGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSASARF*RSSGWM
Trigger: CATCCACCCTGAGCTCCGCAAGAATCTGGCTGAGGC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGCTCGTCCAGTGGCTTaGTCTCAAATAGCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEARPVA*SQIASG
Trigger: CCCGCTGGCTATTTGAGACAAAGCCACTGGACGAGC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCTCCTCTCAGAGGCCTaGCTAGTTAGCCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGLLSEA*LVSRGC
Trigger: GCAGCCCCGGCTAACTAGCAAGGCCTCTGAGAGGAG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGTGCTTGTTCAGAACTaGCTGGTGCAGGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEVLVQN*LVQALG
Trigger: GCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCAC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGGCTCTCAGGGGCCCCTaGGTGGGAACCTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: PCQGLFLQLSNFRADPCQALRGP*VGTFHG
Trigger: CCCATGGAAGGTTCCCACCAAGGGGCCCCTGAGAGC...CTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGGTTCTTGACTGCAGTTaGACCTCCGACCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEVLDCS*TSDLLA
Trigger: GGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAAC...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS TCA 90 bp CCAATGGCATCCAGTCTCCAGTTCTCAAAGATCCAGCGCATGCACTaGACGTCACCCTCGGTGGGTTCCTCAGAGCCCAGGACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PMASSLQFSKIQRMH*TSPSVGSSEPRTSA
Trigger: GGCTGAGGTCCTGGGCTCTGAGGAACCCACCGAGGGTGACGTTCAGTGCATGCGCTGGATCTTTGAGAACTGGAGACTGGATGCCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 90 bp TGCCTCCAGGGCCTGAAAAACCTCTTTCTGACGAGACACCTGCCCTaGAGGGATCTCCACGCGGCTGCAGTATCTCACAGGCCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: CLQGLKNLFLTRHLP*RDLHAAAVSHRPSS
Trigger: GGAAGACGGCCTGTGAGATACTGCAGCCGCGTGGAGATCCCTTCAGGGCAGGTGTCTCGTCAGAAAGAGGTTTTTCAGGCCCTGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp ACATCACCTCCGACTATCTGCTCTCTGCTAACAGAGGTCAGGGCATaGAGGCGGCCCTTGCTGTCCTGCATGGCATACACTGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: TSPPTICSLLTEVRA*RRPLLSCMAYTGDP
Trigger: AGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGTTAGCAGAGAGCAGATAGTCGGAGGTGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CTGCTGGAGCTCAGGGTCCATGTCTTCAATATTCCCACTGCTGCCTaGAGTTGGCAGCCTCAGCGGCTTGAGTTGGAGCTGGCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LLELRVHVFNIPTAA*SWQPQRLELELASW
Trigger: CCAACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGCCAACTCCAGGCAGCAGTGGGAATATTGAAGACATGGACCCTGAGCTCCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACCCAACAGACACCTTCTaGCTGCCCTGGCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYPTDTF*LPWLQV
Trigger: GACCTGGAGCCAGGGCAGCAAGAAGGTGTCTGTTGG...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGATTGCCATCCTCATGGTaGGTGTGGGGGCCACCTGTG +
Preference number: 5 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRLPSSW*VWGPPV
Trigger: CACAGGTGGCCCCCACACCAACCATGAGGATGGCAA...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCGCCTCAGCCAGATTCTaGCGGAGCTCAGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGASARF*RSSGWM
Trigger: CATCCACCCTGAGCTCCGCAAGAATCTGGCTGAGGC...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTTCCTGCTGCTCCCGTaGGTGGATCATCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYFLLLP*VDHLQG
Trigger: CCCCTGGAGATGATCCACCAACGGGAGCAGCAGGAA...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGCGGCCAACTCACTCATaGGGCAAGTCTCGAACAACC +
Preference number: 5 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVERPTHS*GKSRTT
Trigger: GGTTGTTCGAGACTTGCCCAATGAGTGAGTTGGCCG...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCTCTGGGCTTCAGCTGTaGCCATCCGCAGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSSGLQL*PSADSA
Trigger: TGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGA...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCCCCCAGGCCTTATGTaGCTTTGGGTAGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGPPGLM*LWVAPA
Trigger: AGCTGGGGCTACCCAAAGCAACATAAGGCCTGGGGG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGCTGCGGCTTCTTCTTaGGGGGCATGGTGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLAAASS*GAWWGP
Trigger: TGGACCCCACCATGCCCCCAAAGAAGAAGCCGCAGC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp ATGGTGATGAAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCGAGGTGGGATCATGGTaGAGGGCATTGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: MVMKGLAARSFWRPHSDSEVGSW*RALSLG
Trigger: CCCCAAGCTCAATGCCCTCAACCATGATCCCACCTC...GGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTTCATCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAGCTCTCAGGGGCCCCTaGGTGGGAACCTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGALRGP*VGTFHG
Trigger: CCCATGGAAGGTTCCCACCAAGGGGCCCCTGAGAGC...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTCAATGTCCAGCAGCCTaGCCAAGGTCTGTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCQCPAA*PRSVPS
Trigger: TGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTG...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGAGCCTCCGCAGGGCCTGCACGTCCACACTGCTTGCGGCCTCCTTCTCCAGGTCCTTCTTCCCAGTTTaGTCTTGGACACCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: KSLRRACTSTLLAASFSRSFFPV*SWTPFW
Trigger: CCAGAAAGGTGTCCAAGACAAAACTGGGAAGAAGGA...CCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGCAGGCCCTGCGGAGGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp ACTGGCCTCAGGCTGGAGGCTAGACATGGAGCTGAGTGCCTTGTGCACAGCCTCCTGATTGCTGACTCTTaGGGTGACCTTTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TGLRLEARHGAECLVHSLLIADS*GDLWAT
Trigger: GGTGGCCCAAAGGTCACCCAAAGAGTCAGCAATCAG...GAGGCTGTGCACAAGGCACTCAGCTCCATGTCTAGCCTCCAGCCTGAGGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCGTATGCTTCCCATTaGGGGTGCAGAGTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRPYASH*GCRVGD
Trigger: GTCCCCCACTCTGCACCCCAAATGGGAAGCATACGG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS TCA 90 bp ATCTGGCCGGCGCAGGACTTGGCAGATGATCCTGGGAAGTTCACCTaGCACCAGCTCCTCCTTTCGTATATAAGGGTGCCCCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: IWPAQDLADDPGKFT*HQLLLSYIRVPLPC
Trigger: ACAGGGCAGGGGCACCCTTATATACGAAAGGAGGAGCTGGTGTCAGGTGAACTTCCCAGGATCATCTGCCAAGTCCTGCGCCGGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp ACCCTATGCCCTGGGCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTaGTTGGACTCCCATGGGCCAGAACCTCACCCTGTCCAATGCTGT +
Preference number: 5 (lower is better)
Translates to: TLCPGPAQQNQFLLL*LDSHGPEPHPVQCC
Trigger: ACAGCATTGGACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 90 bp TTGCTGTCCTGCATGGCATACACTGGGGACCCTATGCCCTGGGCCTaGCCAGCAGAATCAGTTCCTTCTTCTCTGCTTGGACTCCCATGG +
Preference number: 5 (lower is better)
Translates to: LLSCMAYTGDPMPWA*PAESVPSSLLGLPW
Trigger: CCATGGGAGTCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp TCTGCAGTTGCCATCCTCATGGTTGGTGTGGGGGCCACCTGTGTCTaGGTGTCGGCCATCCTTCTGAGAAGAAGGGGCAGAGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: SAVAILMVGVGATCV*VSAILLRRRGRDED
Trigger: ATCCTCATCTCTGCCCCTTCTTCTCAGAAGGATGGCCGACACCCAGACACAGGTGGCCCCCACACCAACCATGAGGATGGCAACTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GTCCAGCGCTCGGGTCTCAAACAGATGCTGCTGCTGCTGAACATCTaGACCAGGTGGGATAAGGTCTGGGGATGGCTGGAAGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VQRSGLKQMLLLLNI*TRWDKVWGWLEVLL
Trigger: GAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCTGTTTGAGACCCGAGCGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTGCTTGGACTCCCATaGGCCAGAACCTCACCCTGTCCAATGCTGTCCAAGGGAAGGGTC +
Preference number: 5 (lower is better)
Translates to: ACPAESVPSSLLGLP*ARTSPCPMLSKGRV
Trigger: GACCCTTCCCTTGGACAGCATTGGACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GAGCTCAGGGTCCATGTCTTCAATATTCCCACTGCTGCCTGGAGTTaGCAGCCTCAGCGGCTTGAGTTGGAGCTGGCCAGTTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: ELRVHVFNIPTAAWS*QPQRLELELASWVF
Trigger: GAAGACCCAACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGCCAACTCCAGGCAGCAGTGGGAATATTGAAGACATGGACCCTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTTGCCATCCTCATGGTaGGTGTGGGGGCCACCTGTG +
Preference number: 5 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLPSSW*VWGPPV
Trigger: CACAGGTGGCCCCCACACCAACCATGAGGATGGCAA...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTTGCCAAGGTCTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGTTGGAGAAGGATTCCTaGGGTGGCGGCAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: PCQGLFLQLSNFRADPCQLEKDS*GGGSGR
Trigger: CCTGCCACTGCCGCCACCCAAGGAATCCTTCTCCAA...CTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAGACCTTGGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCTCCAGTTCCTTGGCTaGCCCTGTCAGCTCGTCCAG +
Preference number: 5 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLLQFLG*PCQLVQ
Trigger: CTGGACGAGCTGACAGGGCAAGCCAAGGAACTGGAG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGTGGCCTCCAGTTCCTaGGCTTGCCCTGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTVASSS*ACPVSS
Trigger: CGAGCTGACAGGGCAAGCCAAGGAACTGGAGGCCAC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTGTGGCCTCCAGTTCCTaGGCTTGCCCTGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCVASSS*ACPVSS
Trigger: CGAGCTGACAGGGCAAGCCAAGGAACTGGAGGCCAC...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCCACAGGTTGGGGCTaGAACATCCAGGTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYSTGWG*NIQVQD
Trigger: GTCCTGCACCTGGATGTTCAAGCCCCAACCTGTGGA...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTGGCCGGCGCAGGACTaGGCAGATGATCCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCWPAQD*ADDPGK
Trigger: CTTCCCAGGATCATCTGCCAAGTCCTGCGCCGGCCA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGGTTGGAGCTGGCCAGTaGGGTCTTCCTGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKVGAGQ*GLPAPA
Trigger: TGCTGGTGCAGGAAGACCCAACTGGCCAGCTCCAAC...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCTCCTCTCAGAGGCCTaGCTAGTTAGCCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMLLSEA*LVSRGC
Trigger: GCAGCCCCGGCTAACTAGCAAGGCCTCTGAGAGGAG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGACAGGGGCTCAGAGGCTaGCTGGATGGAGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGQGLRG*LDGVLS
Trigger: GCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCTG...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGCTGCGGCTTCTTCTTaGGGGGCATGGTGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTAAASS*GAWWGP
Trigger: TGGACCCCACCATGCCCCCAAAGAAGAAGCCGCAGC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGGGCACTGTGGTCTTTaGGAGGTCCCTGGAAATGGC +
Preference number: 5 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRGHCGL*EVPGNG
Trigger: GCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp ACCCGAGGAGGGCACAAATACTCTCTTGATGTCTCCTGCCTCCTGGTGGAAGGGGTTCTTGACTGCAGTTaGACCTCCGACCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TRGGHKYSLDVSCLLVEGVLDCS*TSDLLA
Trigger: GGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAAC...CCCTTCCACCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCCCTCCTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp TCACTGGGCAGCTGGCTGGGAGTAGCTGCAGGACACCTGCACCGTCTCAGCTTCGTGTGGCATTCAACCTaGGCTTGGTTCTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: SLGSWLGVAAGHLHRLSFVWHST*AWFLTA
Trigger: TGCAGTCAAGAACCAAGCCAAGGTTGAATGCCACAC...GAAGCTGAGACGGTGCAGGTGTCCTGCAGCTACTCCCAGCCAGCTGCCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTGCCTCCTGGTGGAAGGGGCAGTTGAGGCTGTGTGACCTCTGGCCTCTGTGTCTTCCCAGTTTTGTCTaGGACACCTTTCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PASWWKGQLRLCDLWPLCLPSFV*DTFLVE
Trigger: CTCCACCAGAAAGGTGTCCAAGACAAAACTGGGAAG...ACACAGAGGCCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCAGGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAAGGGGCAGGTTCAGGTaGCACAGAGCACTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRRGRFR*HRALGD
Trigger: ATCACCCAGTGCTCTGTGCAACCTGAACCTGCCCCT...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCCCGTATGCTTCCCATTaGGGGTGCAGAGTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLPYASH*GCRVGD
Trigger: GTCCCCCACTCTGCACCCCAAATGGGAAGCATACGG...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS TCA 90 bp TTCAGAGTGTCCAGCGCTCGGGTCTCAAACAGATGCTGCTGCTGCTaGACATCTGGACCAGGTGGGATAAGGTCTGGGGATGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FRVSSARVSNRCCCC*TSGPGGIRSGDGWK
Trigger: CTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCTGTTTGAGACCCGAGCGCTGGACACTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp GTAGAGGCTGGATGCAAGGGTCTCTCTTGGCTGATGGGGTGTTTGTaGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTCGTTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VEAGCKGLSWLMGCL*SVAAVVSGFVVPLE
Trigger: CTCCAGAGGAACGACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCATCCAGCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp TATGCCCTGGGCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTGCTTaGACTCCCATGGGCCAGAACCTCACCCTGTCCAATGCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: YALGLPSRISSFFSA*TPMGQNLTLSNAVQ
Trigger: TTGGACAGCATTGGACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp TCCTGTCACAGCAGCAAGGGTCTCTCTTGGCTGATGGGGTGTTTGTaGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTCGTTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SCHSSKGLSWLMGCL*SVAAVVSGFVVPLE
Trigger: CTCCAGAGGAACGACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCTGCTGTGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTTCCTGCTGCTCCCGTaGGTGGATCATCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCFLLLP*VDHLQG
Trigger: CCCCTGGAGATGATCCACCAACGGGAGCAGCAGGAA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTTCTGCACATCGCCCTTaGGGGGTGCCTCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: AVHLASRDMLIADSLGDLSAHRP*GVPQAG
Trigger: CCCAGCCTGAGGCACCCCCAAAGGGCGATGTGCAGA...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTCTGCACATCGCCCTTaGGGGGTGCCTCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWASAHRP*GVPQAG
Trigger: CCCAGCCTGAGGCACCCCCAAAGGGCGATGTGCAGA...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACGGCCAACTCACTCATaGGGCAAGTCTCGAACAACC +
Preference number: 5 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRRPTHS*GKSRTT
Trigger: GGTTGTTCGAGACTTGCCCAATGAGTGAGTTGGCCG...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGTTGGAGCTGGCCAGTaGGGTCTTCCTGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMVGAGQ*GLPAPA
Trigger: TGCTGGTGCAGGAAGACCCAACTGGCCAGCTCCAAC...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTGGGGTGGGGCCCTGCTaGTGCTTGTTCAGAACTTGC +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCGVGPC*CLFRTC
Trigger: GCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCC...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGGGGTGGGGCCCTGCTaGTGCTTGTTCAGAACTTGC +
Preference number: 5 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMGVGPC*CLFRTC
Trigger: GCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCC...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCCCCCAGGCCTTATGTaGCTTTGGGTAGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMPPGLM*LWVAPA
Trigger: AGCTGGGGCTACCCAAAGCAACATAAGGCCTGGGGG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGCACGTCCACACTGCTaGCGGCCTCCTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCARPHC*RPPSPG
Trigger: CCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGCACGTCCACACTGCTaGCGGCCTCCTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAARPHC*RPPSPG
Trigger: CCCTGGAGAAGGAGGCCGCAAGCAGTGTGGACGTGC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGGGGCACTGTGGTCTTTaGGAGGTCCCTGGAAATGGC +
Preference number: 5 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKGHCGL*EVPGNG
Trigger: GCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCC...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACTCTCTAGAGGCTTCCTaGTGGCCGACTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYSLEAS*WPTGWR
Trigger: TCTCCATCCAGTCGGCCACAAGGAAGCCTCTAGAGA...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCTCCAGAACACTCTTTaGCCACCCTCTGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCLQNTL*PPSGQG
Trigger: CCCCTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGAG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCCAGCAAGGGTCTCTCTaGGCTGATGGGGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRQQGSL*ADGVFV
Trigger: CACAAACACCCCATCAGCCAAGAGAGACCCTTGCTG...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS TCA 90 bp CCTGGGGATCCACTCGCTGTAGGTGACCCACTTGGACCTTGTCTCTaGAAGCATCCAGGGGCTTTGTTTCAAATAGCCACAGGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PGDPLAVGDPLGPCL*KHPGALFQIATGWS
Trigger: GCTCCACCCTGTGGCTATTTGAAACAAAGCCCCTGGATGCTTTCAGAGACAAGGTCCAAGTGGGTCACCTACAGCGAGTGGATCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CTGCTGCTGCTGAACATCTGGACCAGGTGGGATAAGGTCTGGGGATaGCTGGAAGTCCTTCTCATCTACCAAGATCTCCCGGATGGCATC +
Preference number: 5 (lower is better)
Translates to: LLLLNIWTRWDKVWG*LEVLLIYQDLPDGI
Trigger: GATGCCATCCGGGAGATCTTGGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGCGGAGCTCACTAGCTaGCCGCTGCTGATGGAACTT +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTAELTS*PLLMEL
Trigger: AAGTTCCATCAGCAGCGGCAAGCTAGTGAGCTCCGC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTTCCTTCTTCTCTGCTaGGACTCCCATGGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRFLLLC*DSHGPE
Trigger: TTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAA...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGGCCTTATGTTGCTTaGGGTAGCCCCAGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLRPYVA*GSPSFP
Trigger: CGGAAAGCTGGGGCTACCCAAAGCAACATAAGGCCT...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGCTGCGGCTTCTTCTTaGGGGGCATGGTGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: KAVHLASRDMLIADSLGDAAASS*GAWWGP
Trigger: TGGACCCCACCATGCCCCCAAAGAAGAAGCCGCAGC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GGGGGCTCCAATTCAGGCAGTGGTGTGCAAATTCACACATGTCGATGCGTGGGCCAATGTCCAGCAGCCTaGCCAAGGTCTGTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GGSNSGSGVQIHTCRCVGQCPAA*PRSVPS
Trigger: TGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTG...GCCCACGCATCGACATGTGTGAATTTGCACACCACTGCCTGAATTGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTGGGCACTGTGGTCTTTaGGAGGTCCCTGGAAATGGC +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCGHCGL*EVPGNG
Trigger: GCCATTTCCAGGGACCTCCAAAAGACCACAGTGCCC...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CCTTGCTCCAGTGTACAGGAGGCAGGTACCCACTTCAGTCCTGGGGCAGTGGAGATTTCTGATCTTGACTaGACTCTGGGCCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PCSSVQEAGTHFSPGAVEISDLD*TLGLSV
Trigger: CACACTGAGGCCCAGAGTCAAGTCAAGATCAGAAAT...CTCCACTGCCCCAGGACTGAAGTGGGTACCTGCCTCCTGTACACTGGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTGGTGGAAGGGGCAGTaGAGGCTGTGTGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLWWKGQ*RLCDLW
Trigger: CCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCGGCACAAATACTCTCTaGATGTCTCCTGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRGTNTL*MSPASW
Trigger: CCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCC...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCACTGAGACATCAGGGTaGCCCTTAAAGCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRTETSG*PLKLGV
Trigger: GACTCCCAGCTTTAAGGGCAACCCTGATGTCTCAGT...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GGACTGTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCACTCCAGAACACTCTTTaGCCACCCTCTGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: GLCSQTGPPPHTVQSRFSLQNTL*PPSGQG
Trigger: CCCCTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGAG...TGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACACAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGCAACGCTGTGTCCAGTaGGCTCTGTTCCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMQRCVQ*ALFLSR
Trigger: CCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTG...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS CCA 90 bp GTTTGGAAGAGCTTCACTGTCTTTTTCACATCACCCTTCAGCTCCTaGATCTCTGAGCGCAGTTCCAAGGGGCTCTGCTCCTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: VWKSFTVFFTSPFSS*ISERSSKGLCSCRE
Trigger: CTCCCTGCAGGAGCAGAGCCCCTTGGAACTGCGCTCAGAGATCCAGGAGCTGAAGGGTGATGTGAAAAAGACAGTGAAGCTCTTCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 90 bp CAGATGCTGCTGCTGCTGAACATCTGGACCAGGTGGGATAAGGTCTaGGGATGGCTGGAAGTCCTTCTCATCTACCAAGATCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: QMLLLLNIWTRWDKV*GWLEVLLIYQDLPD
Trigger: ATCCGGGAGATCTTGGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCCAACAGACACCTTCTaGCTGCCCTGGCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAPTDTF*LPWLQV
Trigger: GACCTGGAGCCAGGGCAGCAAGAAGGTGTCTGTTGG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCCAACAGACACCTTCTaGCTGCCCTGGCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: KAVHLASRDMLIADSLGDPTDTF*LPWLQV
Trigger: GACCTGGAGCCAGGGCAGCAAGAAGGTGTCTGTTGG...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTTGGAGAAGGATTCCTaGGGTGGCGGCAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVLEKDS*GGGSGR
Trigger: CCTGCCACTGCCGCCACCCAAGGAATCCTTCTCCAA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGGGGCTGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGAAAGCATCCAGGGGCTTaGTTTCAAATAGCCACAGGG +
Preference number: 5 (lower is better)
Translates to: KGLAARSFWRPHSDSKQRKHPGA*FQIATG
Trigger: CCCTGTGGCTATTTGAAACAAAGCCCCTGGATGCTT...TCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGAAAAGCCAAGTGAACTaGTGGACAGAACCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMKSQVN*WTEPAG
Trigger: CCCCGCGGGTTCTGTCCACAAGTTCACTTGGCTTTT...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTGGCAGCCTCAGCGGCTaGAGTTGGAGCTGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPGSLSG*SWSWPV
Trigger: AACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGCC...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTAGGCCTTATGTTGCTTaGGGTAGCCCCAGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCRPYVA*GSPSFP
Trigger: CGGAAAGCTGGGGCTACCCAAAGCAACATAAGGCCT...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGAGGTGGGATCATGGTaGAGGGCATTGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQEVGSW*RALSLG
Trigger: CCCCAAGCTCAATGCCCTCAACCATGATCCCACCTC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CGTTGGTGTTCTCTTTGCCCCACCTCCGAGGAAAAGCTGGGAGATAGAGGCAAGATGGAGCTGAGTGCCTaGTGCACAGCCTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: RWCSLCPTSEEKLGDRGKMELSA*CTASSM
Trigger: CATTGAAGAGGCTGTGCACAAGGCACTCAGCTCCAT...CTTGCCTCTATCTCCCAGCTTTTCCTCGGAGGTGGGGCAAAGAGAACACCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTTCTCTAGAGGCTTCCTaGTGGCCGACTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTSLEAS*WPTGWR
Trigger: TCTCCATCCAGTCGGCCACAAGGAAGCCTCTAGAGA...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTCTCTAGAGGCTTCCTaGTGGCCGACTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCSLEAS*WPTGWR
Trigger: TCTCCATCCAGTCGGCCACAAGGAAGCCTCTAGAGA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCTGATTGCTGACTCTTaGGGTGACCTTTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCLIADS*GDLWAT
Trigger: GGTGGCCCAAAGGTCACCCAAAGAGTCAGCAATCAG...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CTGTTCCTTCAGTTGAGCAACTTCCGTGCTGACCCGTGTCAGCTCCCCAAAGGCAGAAAGGCAGTGCATTaGGCTTCTAGGGACATGCTG +
Preference number: 5 (lower is better)
Translates to: LFLQLSNFRADPCQLPKGRKAVH*ASRDML
Trigger: CAGCATGTCCCTAGAAGCCAAATGCACTGCCTTTCT...GCCTTTGGGGAGCTGACACGGGTCAGCACGGAAGTTGCTCAACTGAAGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS CCA 90 bp TCGGGTCTCAAACAGATGCTGCTGCTGCTGAACATCTGGACCAGGTaGGATAAGGTCTGGGGATGGCTGGAAGTCCTTCTCATCTACCAA +
Preference number: 5 (lower is better)
Translates to: SGLKQMLLLLNIWTR*DKVWGWLEVLLIYQ
Trigger: TTGGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCTGTTTGAGACCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTGGCTGATGGGGTGTTaGTGGTCTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLWLMGC*WSVAAV
Trigger: CACAGCTGCTACAGACCACAAACACCCCATCAGCCA...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGCAGGTCCTCTGCAGTaGCCATCCTCATGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAAGPLQ*PSSWLV
Trigger: CACCAACCATGAGGATGGCAACTGCAGAGGACCTGC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGCTCGTCCAGTGGCTTaGTCTCAAATAGCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCARPVA*SQIASG
Trigger: CCCGCTGGCTATTTGAGACAAAGCCACTGGACGAGC...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACTCCACAGGTTGGGGCTaGAACATCCAGGTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: KAVHLASRDMLIADSLGDSTGWG*NIQVQD
Trigger: GTCCTGCACCTGGATGTTCAAGCCCCAACCTGTGGA...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCCCGAGAGCACATACTaGGCAAGACAGAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVPESTY*ARQSSP
Trigger: AGGGGAGCTCTGTCTTGCCAAGTATGTGCTCTCGGG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCCCCGAGAGCACATACTaGGCAAGACAGAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAPESTY*ARQSSP
Trigger: AGGGGAGCTCTGTCTTGCCAAGTATGTGCTCTCGGG...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGGCAGCCTCAGCGGCTaGAGTTGGAGCTGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEGSLSG*SWSWPV
Trigger: AACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGCC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTCTGGGCTTCAGCTGTaGCCATCCGCAGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWASGLQL*PSADSA
Trigger: TGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGA...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTCAGGGGCTCAGAGGCTaGCTGGATGGAGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIQGLRG*LDGVLS
Trigger: GCTGAGGACTCCATCCAGCAAGCCTCTGAGCCCCTG...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTGAGGTGGGATCATGGTaGAGGGCATTGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: AVHLASRDMLIADSLGDLEVGSW*RALSLG
Trigger: CCCCAAGCTCAATGCCCTCAACCATGATCCCACCTC...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAATGGAGCTGAGTGCCTaGTGCACAGCCTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGMELSA*CTASSM
Trigger: CATTGAAGAGGCTGTGCACAAGGCACTCAGCTCCAT...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GGGGAGGAGGGAGAATCTCGGCTGGAAGGTAAAACCCGAGGAGGGCACAAATACGCATTCAACCTTGGCTaGGTTCTTGACTGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: GEEGESRLEGKTRGGHKYAFNLG*VLDCSL
Trigger: CAAACTGCAGTCAAGAACCAAGCCAAGGTTGAATGC...GTATTTGTGCCCTCCTCGGGTTTTACCTTCCAGCCGAGATTCTCCCTCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTGGTGGAAGGGGCAGTaGAGGCTGTGTGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPWWKGQ*RLCDLW
Trigger: CCAGAGGTCACACAGCCTCAACTGCCCCTTCCACCA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTGGCACAAATACTCTCTaGATGTCTCCTGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTGTNTL*MSPASW
Trigger: CCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCC...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTACTGAGACATCAGGGTaGCCCTTAAAGCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTTETSG*PLKLGV
Trigger: GACTCCCAGCTTTAAGGGCAACCCTGATGTCTCAGT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTCCTTCTTCCCAGTTTaGTCTTGGACACCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRSFFPV*SWTPFW
Trigger: CCAGAAAGGTGTCCAAGACAAAACTGGGAAGAAGGA...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTAGGGGCAGGTTCAGGTaGCACAGAGCACTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: AVHLASRDMLIADSLGDLRGRFR*HRALGD
Trigger: ATCACCCAGTGCTCTGTGCAACCTGAACCTGCCCCT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCTCCAGAACACTCTTTaGCCACCCTCTGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPLQNTL*PPSGQG
Trigger: CCCCTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGAG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCCAACGCTGTGTCCAGTaGGCTCTGTTCCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVQRCVQ*ALFLSR
Trigger: CCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTG...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS CCA 90 bp TGTGGTCTCAGGGTTCGTCGTTCCTCTGGAGGTTCTTGTTCAAATTaGTTCTGTTCTGCTGGCTCCAACAGACACCTTCTTGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: CGLRVRRSSGGSCSN*FCSAGSNRHLLAAL
Trigger: CAGGGCAGCAAGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAATTTGAACAAGAACCTCCAGAGGAACGACGAACCCTGAGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTGGCTGATGGGGTGTTaGTGGTCTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVWLMGC*WSVAAV
Trigger: CACAGCTGCTACAGACCACAAACACCCCATCAGCCA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCGAGATGAGGATGGGATaGGGAGCCTTAGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: PVGSVPLQGLRSRWLGTLEMRMG*GALDLD
Trigger: ATCTAGATCTAAGGCTCCCAATCCCATCCTCATCTC...GAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCTCTTTCTGGTTTCTTaGCAGACTGTCAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTLFLVS*QTVRAL
Trigger: GAGAGCCCTGACAGTCTGCAAAGAAACCAGAAAGAG...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGCAATGTCCAGCAGCCTaGCCAAGGTCTGTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQQCPAA*PRSVPS
Trigger: TGAAGGAACAGACCTTGGCAAGGCTGCTGGACATTG...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCATGGAGCTGAGTGCCTaGTGCACAGCCTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLMELSA*CTASSM
Trigger: CATTGAAGAGGCTGTGCACAAGGCACTCAGCTCCAT...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGCACAAATACTCTCTaGATGTCTCCTGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SDSKQRPTLCPVGSVPLQGTNTL*MSPASW
Trigger: CCAGGAGGCAGGAGACATCAAGAGAGTATTTGTGCC...CTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTAGATGCCATTTCCTCTaGGTCCTTGCTCCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCRCHFL*VLAPVY
Trigger: GTACACTGGAGCAAGGACCAAGAGGAAATGGCATCT...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp ACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGAGATGCCATTTCCTCTaGGTCCTTGCTCCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: TNAVSSWLCSSPGIKEQMRCHFL*VLAPVY
Trigger: GTACACTGGAGCAAGGACCAAGAGGAAATGGCATCT...CATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TGGCGGCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTTCCTCTGGAGGTTCTaGTTCAAATTGGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: WRPGPSGDLTVIPNRDQRFLWRF*FKLVLF
Trigger: GAACAGAACCAATTTGAACAAGAACCTCCAGAGGAA...GCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGCCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACATGCAAGGGTCTCTCTaGGCTGATGGGGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: KAVHLASRDMLIADSLGDMQGSL*ADGVFV
Trigger: CACAAACACCCCATCAGCCAAGAGAGACCCTTGCAT...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGCAGGTCCTCTGCAGTaGCCATCCTCATGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIAGPLQ*PSSWLV
Trigger: CACCAACCATGAGGATGGCAACTGCAGAGGACCTGC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GTGTTCCCAAACTGGTCCACCTCCTCATACTGTTCAGTCACGGTTCTCATGGCTAAGCATCCAGGGGCTTaGTTTCAAATAGCCACAGGG +
Preference number: 5 (lower is better)
Translates to: VFPNWSTSSYCSVTVLMAKHPGA*FQIATG
Trigger: CCCTGTGGCTATTTGAAACAAAGCCCCTGGATGCTT...AGCCATGAGAACCGTGACTGAACAGTATGAGGAGGTGGACCAGTTTGGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396251.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTTCCTTCTTCTCTGCTaGGACTCCCATGGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAFLLLC*DSHGPE
Trigger: TTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAA...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAGGGCCCTGCTTGTGCTaGTTCAGAACTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEGPCLC*FRTCWC
Trigger: GCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCC...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAACTGTGACACTGATCTaGTGGGCACTGTGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGTVTLI*WALWSF
Trigger: AAAAGACCACAGTGCCCACAAGATCAGTGTCACAGT...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTGTTCTTGACTGCAGTTaGACCTCCGACCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIVLDCS*TSDLLA
Trigger: GGCCAGGAGGTCGGAGGTCAAACTGCAGTCAAGAAC...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CTCACAGTGATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCGTGTGGCATTCAACCTaGGCTTGGTTCTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: LTVIPNRDQRCVQLALFLVWHST*AWFLTA
Trigger: TGCAGTCAAGAACCAAGCCAAGGTTGAATGCCACAC...GAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTATTTCTGATCTTGACTaGACTCTGGGCCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTISDLD*TLGLSV
Trigger: CACACTGAGGCCCAGAGTCAAGTCAAGATCAGAAAT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCACTGAGACATCAGGGTaGCCCTTAAAGCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVTETSG*PLKLGV
Trigger: GACTCCCAGCTTTAAGGGCAACCCTGATGTCTCAGT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCCAGTTGGCTCTGTTCCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTAGGTTCTTGTTCAAATaGGTTCTGTTCTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SSWLCSSPGIKEQMAGNTRFLFK*VLFCWL
Trigger: GAGCCAGCAGAACAGAACCAATTTGAACAAGAACCT...AGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGGAACAGAGCCAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GATTCCAAACAGAGACCAACGCTGTGTCCAGTTGGCTCTGTTCCTCTCCAGGGAAGGTTCTTGTTCAAATaGGTTCTGTTCTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: DSKQRPTLCPVGSVPLQGRFLFK*VLFCWL
Trigger: GAGCCAGCAGAACAGAACCAATTTGAACAAGAACCT...TCCCTGGAGAGGAACAGAGCCAACTGGACACAGCGTTGGTCTCTGTTTGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAATGGCTGATGGGGTGTTaGTGGTCTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKEWLMGC*WSVAAV
Trigger: CACAGCTGCTACAGACCACAAACACCCCATCAGCCA...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACTGGCTGGGGCCTGGTaGGCTCCTGGTCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKLAGAW*APGLCC
Trigger: ACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCAG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTAAAAGCCAAGTGAACTaGTGGACAGAACCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIKSQVN*WTEPAG
Trigger: CCCCGCGGGTTCTGTCCACAAGTTCACTTGGCTTTT...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGTGTGGCATTCAACCTaGGCTTGGTTCTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVVWHST*AWFLTA
Trigger: TGCAGTCAAGAACCAAGCCAAGGTTGAATGCCACAC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCAAATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTCTTCCCAGTTTTGTCTaGGACACCTTTCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ANSHMSMRGPGLCEKHVCLPSFV*DTFLVE
Trigger: CTCCACCAGAAAGGTGTCCAAGACAAAACTGGGAAG...ACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCAGAAAGGCAGTGCATTaGGCTTCTAGGGACATGCTG +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVRKAVH*ASRDML
Trigger: CAGCATGTCCCTAGAAGCCAAATGCACTGCCTTTCT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCCAGGTCCTTCTGGAGACCTCACAGTGATTCCAAACAGAGACCAACGCTGTGTTTCCTCTGGAGGTTCTaGTTCAAATTGGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ARSFWRPHSDSKQRPTLCFLWRF*FKLVLF
Trigger: GAACAGAACCAATTTGAACAAGAACCTCCAGAGGAA...ACACAGCGTTGGTCTCTGTTTGGAATCACTGTGAGGTCTCCAGAAGGACCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTACACAGGGGCTCCGTTaGGAAGAGCTTCACTGTCTT +
Preference number: 5 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPITQGLR*EELHCL
Trigger: AAGACAGTGAAGCTCTTCCAAACGGAGCCCCTGTGT...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAGCATGGAGGCGGCCCTaGCTGTCCTGCATGGCATAC +
Preference number: 5 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKAWRRP*LSCMAY
Trigger: GTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGC...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS-3UTR CAA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCTCTTTCTGGTTTCTTaGCAGACTGTCAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPLFLVS*QTVRAL
Trigger: GAGAGCCCTGACAGTCTGCAAAGAAACCAGAAAGAG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACCTTACTGTGACACTGATCTaGTGGGCACTGTGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: AVHLASRDMLIADSLGDLTVTLI*WALWSF
Trigger: AAAAGACCACAGTGCCCACAAGATCAGTGTCACAGT...AAGGTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCGCATTCAACCTTGGCTaGGTTCTTGACTGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVAFNLG*VLDCSL
Trigger: CAAACTGCAGTCAAGAACCAAGCCAAGGTTGAATGC...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCATTTCTGATCTTGACTaGACTCTGGGCCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVISDLD*TLGLSV
Trigger: CACACTGAGGCCCAGAGTCAAGTCAAGATCAGAAAT...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTCTTCCCAGTTTTGTCTaGGACACCTTTCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPLPSFV*DTFLVE
Trigger: CTCCACCAGAAAGGTGTCCAAGACAAAACTGGGAAG...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AATTCACACATGTCGATGCGTGGGCCAGGCCTGTGTGAAAAACATGTGTGTGTCTCCTTCTTCCCAGTTTaGTCTTGGACACCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: NSHMSMRGPGLCEKHVCVSFFPV*SWTPFW
Trigger: CCAGAAAGGTGTCCAAGACAAAACTGGGAAGAAGGA...GACACACACATGTTTTTCACACAGGCCTGGCCCACGCATCGACATGTGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CAACTCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCGAAGAACTGGGCCTATaGAAAGAACTGCGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: QLCGPLPDLSFSIWKNWAEELGL*KELRKG
Trigger: TCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTTC...GGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp AAGGCAGTGCATTTGGCTTCTAGGGACATGCTGATTGCTGACTCTTTGGGTGACGAAGAACTGGGCCTATaGAAAGAACTGCGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: KAVHLASRDMLIADSLGDEELGL*KELRKG
Trigger: TCCCTTTCGCAGTTCTTTCAATAGGCCCAGTTCTTC...GTCACCCAAAGAGTCAGCAATCAGCATGTCCCTAGAAGCCAAATGCACTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp TCTGTGGGCCTCTTCCAGACCTTTCTTTTTCCATTTGGAAGAACTGGGCCTATTAGAAAGGCAGTGCATTaGGCTTCTAGGGACATGCTG +
Preference number: 5 (lower is better)
Translates to: SVGLFQTFLFPFGRTGPIRKAVH*ASRDML
Trigger: CAGCATGTCCCTAGAAGCCAAATGCACTGCCTTTCT...AATAGGCCCAGTTCTTCCAAATGGAAAAAGAAAGGTCTGGAAGAGGCCCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CCTCTCCAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAACTGTGACACTGATCTaGTGGGCACTGTGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: PLQGLRSRWLGTLRLIKETVTLI*WALWSF
Trigger: AAAAGACCACAGTGCCCACAAGATCAGTGTCACAGT...TTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp GAAAGGGAAATGGCCCACAGTAATCCTCTGAAGATGCCATTTCCTCTTGGTCCTTTCCTCTGGAGGTTCTaGTTCAAATTGGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: EREMAHSNPLKMPFPLGPFLWRF*FKLVLF
Trigger: GAACAGAACCAATTTGAACAAGAACCTCCAGAGGAA...AGGACCAAGAGGAAATGGCATCTTCAGAGGATTACTGTGGGCCATTTCCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAACTGATTGCTGACTCTTaGGGTGACCTTTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKLIADS*GDLWAT
Trigger: GGTGGCCCAAAGGTCACCCAAAGAGTCAGCAATCAG...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS-3UTR CAA 90 bp CAGGGATTAAGGAGCAGATGGCTGGGAACACTCAGACTAATTAAAGAAATAAAAGAGATGAGGATGGGATaGGGAGCCTTAGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: QGLRSRWLGTLRLIKEIKEMRMG*GALDLD
Trigger: ATCTAGATCTAAGGCTCCCAATCCCATCCTCATCTC...TTTTATTTCTTTAATTAGTCTGAGTGTTCCCAGCCATCTGCTCCTTAATCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp AGGCTCTGGGCTTCAGCTGTTGCCATCCGCAGACTCTaGATGGCGGCCAGGAGGTCTGGGGCCCCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: RLWASAVAIRRL*MAARRSGAPGP
Trigger: GGGGCCTGGGGCCCCAGACCTCCTGGCCGCCATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 72 bp TCCCCCGGATCACCCGCACCTGGCTGGGGTCCTGGTTaGTGGCGTCCAGAGGCCGGGTCTCAAAGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SPGSPAPGWGPG*WRPEAGSQRAS
Trigger: GCTGGCTCTTTGAGACCCGGCCTCTGGACGCCATCAACCAGGACCCCAGCCAGGTGCGGGTGATCCGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CCAGGCGGTCCAGCGGCCGCGTCTCAAAGAGCATCCTaGTACCCTGCACATCTCCGCTGGCTGCAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: PGGPAAASQRAS*YPAHLRWLQAP
Trigger: GGGAGCCTGCAGCCAGCGGAGATGTGCAGGGTACCAGGATGCTCTTTGAGACGCGGCCGCTGGACCGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp CACCGAGCTGTGCCAACGTCCCCAGCCACCACTTCCTaGCGGGTGATGCCCCGCACCACGTCGATGGTACTG +
Preference number: 6 (lower is better)
Translates to: HRAVPTSPATTS*RVMPRTTSMVL
Trigger: CAGTACCATCGACGTGGTGCGGGGCATCACCCGGCAGGAAGTGGTGGCTGGGGACGTTGGCACAGCTCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp AGCTGGCCAGTTGGGTCTTCCTGCACCAGCAGCCCCTaGTGGTCCACATCTGGCCGGCGCAGGACTTGGCAG +
Preference number: 6 (lower is better)
Translates to: SWPVGSSCTSSP*WSTSGRRRTWQ
Trigger: CTGCCAAGTCCTGCGCCGGCCAGATGTGGACCAGCAGGGGCTGCTGGTGCAGGAAGACCCAACTGGCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AGCCAGCGGGCTGCACGAACGTCTCCTCCACCTGGCTaGGGCCTGGTTGGCTCCTGGTCTGTGCTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: SQRAARTSPPPG*GLVGSWSVLLA
Trigger: TGCCAACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCAGGTGGAGGAGACGTTCGTGCAGCCCGCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AGGTCAGGGCATGGAGGCGGCCCTTGCTGTCCTGCATaGCATACACTGGGGACCCTATGCCCTGGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: RSGHGGGPCCPA*HTLGTLCPGPA
Trigger: GGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp ATCCCCCGGATCACCCGCACCTGGCTGGGGTCCTGGTaGATGGCGTCCAGAGGCCGGGTCTCAAAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: IPRITRTWLGSW*MASRGRVSKSQ
Trigger: CTGGCTCTTTGAGACCCGGCCTCTGGACGCCATCAACCAGGACCCCAGCCAGGTGCGGGTGATCCGGGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp ACAGAGGTCAGGGCATGGAGGCGGCCCTTGCTGTCCTaGATGGCATACACTGGGGACCCTATGCCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TEVRAWRRPLLS*MAYTGDPMPWA
Trigger: GGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp TGCCTGAGGGGCTCATGGGCTGCTCTTCCAGGAGGTTaGCCCCTTGGATGCTCTCAGCTGCCAGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: CLRGSWAALPGG*PLGCSQLPGSP
Trigger: TGGGCTCCCTGGCAGCTGAGAGCATCCAAGGGGGCAACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CCTGGAGTTGGCAGCCTCAGCGGCTTGAGTTGGAGCTaGCCAGTTGGGTCTTCCTGCACCAGCAGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: PGVGSLSGLSWS*PVGSSCTSSPC
Trigger: GCAGGGGCTGCTGGTGCAGGAAGACCCAACTGGCCAGCTCCAACTCAAGCCGCTGAGGCTGCCAACTCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AGTCTTCAGGGTGGTCTCTGCAGCTTGGAGGCCCCCTaGGCAGACTTCTGCCATCGCCTTCCCTGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: SLQGGLCSLEAP*ADFCHRLPWWP
Trigger: GGGCCACCAGGGAAGGCGATGGCAGAAGTCTGCCCAGGGGGCCTCCAAGCTGCAGAGACCACCCTGAAGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS CAA 72 bp GGAGGGGCAGGTCCTCTGCAGTTGCCATCCTCATGGTaGGTGTGGGGGCCACCTGTGTCTGGGTGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: GGAGPLQLPSSW*VWGPPVSGCRP
Trigger: TGGCCGACACCCAGACACAGGTGGCCCCCACACCAACCATGAGGATGGCAACTGCAGAGGACCTGCCCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 72 bp CCGCGTTGCTTTGGATCTCCTCCCGGCATGCGGCCTTaGCCTCATGGATGGCGCCCTCTGCATCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: PRCFGSPPGMRP*PHGWRPLHPGW
Trigger: CCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAGCAACGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp CAGCCAGATCCTCGGCCACAGCCTCAGCCAGATTCTTaGGGAGCTCAGGGTGGATGTGCCTGTAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: QPDPRPQPQPDS*GAQGGCACRGG
Trigger: GCCGCCTCTACAGGCACATCCACCCTGAGCTCCGCAAGAATCTGGCTGAGGCTGTGGCCGAGGATCTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp TCCAGCGGCCGCGTCTCAAAGAGCATCCTGGTACCCTaGACATCTCCGCTGGCTGCAGGCTCCCTCACAGTG +
Preference number: 6 (lower is better)
Translates to: SSGRVSKSILVP*TSPLAAGSLTV
Trigger: CACTGTGAGGGAGCCTGCAGCCAGCGGAGATGTGCAGGGTACCAGGATGCTCTTTGAGACGCGGCCGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp CCGGCATGCGGCCTTGACCTCATGGATGGCGCCCTCTaGATCCTGGATGGCACACAGGGGCTCCGTTTGGAA +
Preference number: 6 (lower is better)
Translates to: PACGLDLMDGAL*ILDGTQGLRLE
Trigger: TTCCAAACGGAGCCCCTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp GACGAGACACCTGCCCTGAAGGGATCTCCACGCGGCTaGAGTATCTCACAGGCCGTCTTCCACAGGGACGGC +
Preference number: 6 (lower is better)
Translates to: DETPALKGSPRG*SISQAVFHRDG
Trigger: GCCGTCCCTGTGGAAGACGGCCTGTGAGATACTGCAGCCGCGTGGAGATCCCTTCAGGGCAGGTGTCTCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp GAGGGGCAGGTCCTCTGCAGTTGCCATCCTCATGGTTaGTGTGGGGGCCACCTGTGTCTGGGTGTCGGCCAT +
Preference number: 6 (lower is better)
Translates to: EGQVLCSCHPHG*CGGHLCLGVGH
Trigger: ATGGCCGACACCCAGACACAGGTGGCCCCCACACCAACCATGAGGATGGCAACTGCAGAGGACCTGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTTGCCGCTGCTGATGGAACTTGGAGAAGGATTCCTTaGGTGGCGGCAGTGGCAGGTCCTCCAGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LAAADGTWRRIP*VAAVAGPPGLG
Trigger: CCCCAGCCCTGGAGGACCTGCCACTGCCGCCACCCAAGGAATCCTTCTCCAAGTTCCATCAGCAGCGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp ATGGAGGCGGCCCTTGCTGTCCTGCATGGCATACACTaGGGACCCTATGCCCTGGGCCTGCCCAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: MEAALAVLHGIH*GPYALGLPSRI
Trigger: GATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CCAGAATGTGGCGGCCTAGAGGGGCAGTCTTCAGGGTaGTCTCTGCAGCTTGGAGGCCCCCTGGGCAGACTT +
Preference number: 6 (lower is better)
Translates to: PECGGLEGQSSG*SLQLGGPLGRL
Trigger: AAGTCTGCCCAGGGGGCCTCCAAGCTGCAGAGACCACCCTGAAGACTGCCCCTCTAGGCCGCCACATTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS CAA 72 bp GGGGAGCCTGGACTGAGAGGGCAGTCTCCCTGTGCCTaGACTGGGGTTCCCTCTGAGAAAGCTGGACACCCC +
Preference number: 6 (lower is better)
Translates to: GEPGLRGQSPCA*TGVPSEKAGHP
Trigger: GGGGTGTCCAGCTTTCTCAGAGGGAACCCCAGTCAAGGCACAGGGAGACTGCCCTCTCAGTCCAGGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS CAA 90 bp GCAGACCTCACCGCGTTGCTTTGGATCTCCTCCCGGCATGCGGCCTaGACCTCATGGATGGCGCCCTCTGCATCCTGGATGGCACACAGG +
Preference number: 6 (lower is better)
Translates to: ADLTALLWISSRHAA*TSWMAPSASWMAHR
Trigger: CCTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp AACTTGCGGGAGGTGGCCTGGACGTCACCACACAGCACGGGCTCCTaGGCAGCTGGCCTCTCGTGTTCTCCAATGGCATCCAGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: NLREVAWTSPHSTGS*AAGLSCSPMASSLQ
Trigger: CTGGAGACTGGATGCCATTGGAGAACACGAGAGGCCAGCTGCCAAGGAGCCCGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp AATAGCCACAGGGTGGAGCGGACATCACCAGGGACCACTTCCTCCTaGGGTGGGGCCTCTGCTCCAGCCTCTTCGTCCCCCTTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: NSHRVERTSPGTTSS*GGASAPASSSPFRV
Trigger: CACTCTGAAGGGGGACGAAGAGGCTGGAGCAGAGGCCCCACCCAAGGAGGAAGTGGTCCCTGGTGATGTCCGCTCCACCCTGTGGCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp AGACCTCACCGCGTTGCTTTGGATCTCCTCCCGGCATaGGGCCTTGACCTCATGGATGGCGCCCTCTGCATC +
Preference number: 6 (lower is better)
Translates to: RPHRVALDLLPA*GLDLMDGALCI
Trigger: GATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp CTCATTGGGCAAGTCTCGAACAACCACCGGATGGTCTaGACATCGCCCTTTGGGGGTGCCTCAGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: LIGQVSNNHRMV*TSPFGGASGWG
Trigger: CCCCCAGCCTGAGGCACCCCCAAAGGGCGATGTGCAGACCATCCGGTGGTTGTTCGAGACTTGCCCAATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp CAGAACTTGCTGGTGCAGGCTCTGGGCTTCAGCTGTTaGCATCCGCAGACTCTGCATGGCGGCCAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: QNLLVQALGFSC*HPQTLHGGQEV
Trigger: GACCTCCTGGCCGCCATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AGGTGGCCTGGACGTCACCACACAGCACGGGCTCCTTaGCAGCTGGCCTCTCGTGTTCTCCAATGGCATCCA +
Preference number: 6 (lower is better)
Translates to: RWPGRHHTARAP*QLASRVLQWHP
Trigger: TGGATGCCATTGGAGAACACGAGAGGCCAGCTGCCAAGGAGCCCGTGCTGTGTGGTGACGTCCAGGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp GCGGCCTTGACCTCATGGATGGCGCCCTCTGCATCCTaGATGGCACACAGGGGCTCCGTTTGGAAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: AALTSWMAPSAS*MAHRGSVWKSF
Trigger: GAAGCTCTTCCAAACGGAGCCCCTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTTTGGATCTCCTCCCGGCATGCGGCCTTGACCTCATaGATGGCGCCCTCTGCATCCTGGATGGCACACAGG +
Preference number: 6 (lower is better)
Translates to: LWISSRHAALTS*MAPSASWMAHR
Trigger: CCTGTGTGCCATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp TCAAAGAGCCAGCGGGCAGACCTCACCGCGTTGCTTTaGATCTCCTCCCGGCATGCGGCCTTGACCTCATGG +
Preference number: 6 (lower is better)
Translates to: SKSQRADLTALL*ISSRHAALTSW
Trigger: CCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCTGCCCGCTGGCTCTTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTGGCTAACCTGCAGGTGCTGCTCCCTGGAGCCCACTaGCCTGTCCACAGGTTGGGGCTTGAACATCCAGGT +
Preference number: 6 (lower is better)
Translates to: LANLQVLLPGAH*PVHRLGLEHPG
Trigger: ACCTGGATGTTCAAGCCCCAACCTGTGGACAGGCCAGTGGGCTCCAGGGAGCAGCACCTGCAGGTTAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CCTGGCTCTCTTGCATCCTGTTGCCTGAGGGGCTCATaGGCTGCTCTTCCAGGAGGTTGCCCCCTTGGATGC +
Preference number: 6 (lower is better)
Translates to: PGSLASCCLRGS*AALPGGCPLGC
Trigger: GCATCCAAGGGGGCAACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp TGCAGAGTCCGCAGGGTCCCCTCAGCTGCAGTCTCCTaGCTCTCTTGCATCCTGTTGCCTGAGGGGCTCATG +
Preference number: 6 (lower is better)
Translates to: CRVRRVPSAAVS*LSCILLPEGLM
Trigger: CATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGACTGCAGCTGAGGGGACCCTGCGGACTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AGCCCCTGCTGGTCCACATCTGGCCGGCGCAGGACTTaGCAGATGATCCTGGGAAGTTCACCTGACACCAGC +
Preference number: 6 (lower is better)
Translates to: SPCWSTSGRRRT*QMILGSSPDTS
Trigger: GCTGGTGTCAGGTGAACTTCCCAGGATCATCTGCCAAGTCCTGCGCCGGCCAGATGTGGACCAGCAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp ACCGCGTTGCTTTGGATCTCCTCCCGGCATGCGGCCTaGACCTCATGGATGGCGCCCTCTGCATCCTGGATG +
Preference number: 6 (lower is better)
Translates to: TALLWISSRHAA*TSWMAPSASWM
Trigger: CATCCAGGATGCAGAGGGCGCCATCCATGAGGTCAAGGCCGCATGCCGGGAGGAGATCCAAAGCAACGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp GAGCTCAGGGTGGATGTGCCTGTAGAGGCGGCGGAGCTCACTAGCTaGCCGCTGCTGATGGAACTTGGAGAAGGATTCCTTGGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: ELRVDVPVEAAELTS*PLLMELGEGFLGWR
Trigger: CCGCCACCCAAGGAATCCTTCTCCAAGTTCCATCAGCAGCGGCAAGCTAGTGAGCTCCGCCGCCTCTACAGGCACATCCACCCTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp ACTATCTGCTCTCTGCTAACAGAGGTCAGGGCATGGAGGCGGCCCTaGCTGTCCTGCATGGCATACACTGGGGACCCTATGCCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TICSLLTEVRAWRRP*LSCMAYTGDPMPWA
Trigger: GGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGTTAGCAGAGAGCAGATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 72 bp CTCACAGGCCGTCTTCCACAGGGACGGCCTGAGGCCTaGAGAGGCTCGGTCTCAAAGACGTGTCTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: LTGRLPQGRPEA*RGSVSKTCLSV
Trigger: GACAGACAGACACGTCTTTGAGACCGAGCCTCTTCAGGCCTCAGGCCGTCCCTGTGGAAGACGGCCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 72 bp AGCTGCAGTCTCCTGGCTCTCTTGCATCCTGTTGCCTaGGGGGCTCATGGGCTGCTCTTCCAGGAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: SCSLLALLHPVA*GAHGLLFQEVA
Trigger: GGCAACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGACTGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 72 bp AGGGCAGTCTCCCTGTGCCTTGACTGGGGTTCCCTCTaGGAAAGCTGGACACCCCCAGGTGGGTCAAAGGTC +
Preference number: 6 (lower is better)
Translates to: RAVSLCLDWGSL*ESWTPPGGSKV
Trigger: GACCTTTGACCCACCTGGGGGTGTCCAGCTTTCTCAGAGGGAACCCCAGTCAAGGCACAGGGAGACTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS GCA 72 bp GGTCTGTGCTGTTGGCAAAGGAGCCTTCCTCAAACTTaGGGGAGGTGGCCTGGACGTCACCACACAGCACGG +
Preference number: 6 (lower is better)
Translates to: GLCCWQRSLPQT*GRWPGRHHTAR
Trigger: CCGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCTCCTTTGCCAACAGCACAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp AAAGAGCATCCTGGTACCCTGCACATCTCCGCTGGCTaGAGGCTCCCTCACAGTGGCCTCCAGTTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: KEHPGTLHISAG*RLPHSGLQFLG
Trigger: GCCAAGGAACTGGAGGCCACTGTGAGGGAGCCTGCAGCCAGCGGAGATGTGCAGGGTACCAGGATGCTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp GAGAAGGGCAGTGCTGAGGAGCTGTCACTGGATAGATaGCCCTCACCGTCCTGGGGATCCACTCGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: EKGSAEELSLDR*PSPSWGSTRCR
Trigger: CCTACAGCGAGTGGATCCCCAGGACGGTGAGGGGCATCTATCCAGTGACAGCTCCTCAGCACTGCCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp CCTCAGCTGCAGTCTCCTGGCTCTCTTGCATCCTGTTaGCTGAGGGGCTCATGGGCTGCTCTTCCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: PQLQSPGSLASC*LRGSWAALPGG
Trigger: ACCTCCTGGAAGAGCAGCCCATGAGCCCCTCAGGCAACAGGATGCAAGAGAGCCAGGAGACTGCAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp GCCATCCTCATGGTTGGTGTGGGGGCCACCTGTGTCTaGGTGTCGGCCATCCTTCTGAGAAGAAGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: AILMVGVGATCV*VSAILLRRRGR
Trigger: TCTGCCCCTTCTTCTCAGAAGGATGGCCGACACCCAGACACAGGTGGCCCCCACACCAACCATGAGGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTGGACGTCACCACACAGCACGGGCTCCTTGGCAGCTaGCCTCTCGTGTTCTCCAATGGCATCCAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LDVTTQHGLLGS*PLVFSNGIQSP
Trigger: TGGAGACTGGATGCCATTGGAGAACACGAGAGGCCAGCTGCCAAGGAGCCCGTGCTGTGTGGTGACGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp TGTTGGCAAAGGAGCCTTCCTCAAACTTGCGGGAGGTaGCCTGGACGTCACCACACAGCACGGGCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: CWQRSLPQTCGR*PGRHHTARAPW
Trigger: CCAAGGAGCCCGTGCTGTGTGGTGACGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCTCCTTTGCCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp ACGTCTCCTCCACCTGGCTGGGGCCTGGTTGGCTCCTaGTCTGTGCTGTTGGCAAAGGAGCCTTCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: TSPPPGWGLVGS*SVLLAKEPSSN
Trigger: GTTTGAGGAAGGCTCCTTTGCCAACAGCACAGACCAGGAGCCAACCAGGCCCCAGCCAGGTGGAGGAGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp TCCTGCTGCTCCCGTTGGTGGATCATCTCCAGGGGCTaGGTCTCAAAAAGCCACCGAGCTGTGCCAACGTCC +
Preference number: 6 (lower is better)
Translates to: SCCSRWWIISRG*VSKSHRAVPTS
Trigger: GGACGTTGGCACAGCTCGGTGGCTTTTTGAGACCCAGCCCCTGGAGATGATCCACCAACGGGAGCAGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp GGCTCAGAGGCTTGCTGGATGGAGTCCTCAGCACGGTaGGCTCCAGCTGGAAAGTCAGGTCCTGTCACAGCA +
Preference number: 6 (lower is better)
Translates to: GSEACWMESSAR*APAGKSGPVTA
Trigger: TGCTGTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTCCATCCAGCAAGCCTCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS TCA 72 bp TGCCCCTCACCGTCCTGGGGATCCACTCGCTGTAGGTaGCCCACTTGGACCTTGTCTCTGAAAGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: CPSPSWGSTRCR*PTWTLSLKASR
Trigger: CCTGGATGCTTTCAGAGACAAGGTCCAAGTGGGTCACCTACAGCGAGTGGATCCCCAGGACGGTGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 72 bp GCAGTATCTCACAGGCCGTCTTCCACAGGGACGGCCTaGGGCCTGAAGAGGCTCGGTCTCAAAGACGTGTCT +
Preference number: 6 (lower is better)
Translates to: AVSHRPSSTGTA*GLKRLGLKDVS
Trigger: AGACACGTCTTTGAGACCGAGCCTCTTCAGGCCTCAGGCCGTCCCTGTGGAAGACGGCCTGTGAGATACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp TCATGGGCTGCTCTTCCAGGAGGTTGCCCCCTTGGATaGTCTCAGCTGCCAGGGAGCCCATGGGACAATTCT +
Preference number: 6 (lower is better)
Translates to: SWAALPGGCPLG*SQLPGSPWDNS
Trigger: AGAATTGTCCCATGGGCTCCCTGGCAGCTGAGAGCATCCAAGGGGGCAACCTCCTGGAAGAGCAGCCCATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp GTGGGGCCCTGCTTGTGCTTGTTCAGAACTTGCTGGTaGAGGCTCTGGGCTTCAGCTGTTGCCATCCGCAGA +
Preference number: 6 (lower is better)
Translates to: VGPCLCLFRTCW*RLWASAVAIRR
Trigger: TCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp GTTGGGGTGGGGCCCTGCTTGTGCTTGTTCAGAACTTaGTGGTGCAGGCTCTGGGCTTCAGCTGTTGCCATC +
Preference number: 6 (lower is better)
Translates to: VGVGPCLCLFRT*WCRLWASAVAI
Trigger: GATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CCGAAGACCGTCCTGGATGGGGTTGGAAGTGGCTGTTaGGGTGGGGCCCTGCTTGTGCTTGTTCAGAACTTG +
Preference number: 6 (lower is better)
Translates to: PKTVLDGVGSGC*GGALLVLVQNL
Trigger: CAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAACAGCCACTTCCAACCCCATCCAGGACGGTCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp TTGCTGGATGGAGTCCTCAGCACGGTGGGCTCCAGCTaGAAAGTCAGGTCCTGTCACAGCAGCTGGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LLDGVLSTVGSS*KVRSCHSSWES
Trigger: ACTCTCCCAGCTGCTGTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTCCATCCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340369.4
CDS CCA 72 bp TTGCTGGATGGAGTCCTCAGCACGGTGGGCTCCAGCTaGAAAGTCAGGTCCTGTCACAGCAGCAAGGGTCTC +
Preference number: 6 (lower is better)
Translates to: LLDGVLSTVGSS*KVRSCHSSKGL
Trigger: GAGACCCTTGCTGCTGTGACAGGACCTGACTTTCCAGCTGGAGCCCACCGTGCTGAGGACTCCATCCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS CAA 72 bp TCTCTGCTAACAGAGGTCAGGGCATGGAGGCGGCCCTaGCTGTCCTGCATGGCATACACTGGGGACCCTATG +
Preference number: 6 (lower is better)
Translates to: SLLTEVRAWRRP*LSCMAYTGDPM
Trigger: CATAGGGTCCCCAGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGTTAGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp CTATGCCCTGGGCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTGCTaGGACTCCCATGGGCCAGAACCTCACCCTGTCCAATGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: LCPGPAQQNQFLLLC*DSHGPEPHPVQCCP
Trigger: TGGACAGCATTGGACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS TCA 72 bp TCCAGTCTCCAGTTCTCAAAGATCCAGCGCATGCACTaGACGTCACCCTCGGTGGGTTCCTCAGAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSLQFSKIQRMH*TSPSVGSSEPR
Trigger: CCTGGGCTCTGAGGAACCCACCGAGGGTGACGTTCAGTGCATGCGCTGGATCTTTGAGAACTGGAGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp GCTCCTCCTTTCGTATATAAGGGTGCCCCTGCCCTGTaGCCGAGAGCACATACTTGGCAAGACAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: APPFVYKGAPAL*PRAHTWQDRAP
Trigger: GGGAGCTCTGTCTTGCCAAGTATGTGCTCTCGGGCACAGGGCAGGGGCACCCTTATATACGAAAGGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp CTTGCCACGGAGGTCCCAAGACCGCAAGCCAGCAGCTaGTGGAGCTCAGGGTCCATGTCTTCAATATTCCCA +
Preference number: 6 (lower is better)
Translates to: LATEVPRPQASS*WSSGSMSSIFP
Trigger: TGGGAATATTGAAGACATGGACCCTGAGCTCCAGCAGCTGCTGGCTTGCGGTCTTGGGACCTCCGTGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp GCAGACTGTGCAGGCCACTCAGGTCTCCTTTATCTATaGAGCTGGCCAACAGCTGCACGCTGCTCCTCTCAG +
Preference number: 6 (lower is better)
Translates to: ADCAGHSGLLYL*SWPTAARCSSQ
Trigger: CTGAGAGGAGCAGCGTGCAGCTGTTGGCCAGCTGCATAGATAAAGGAGACCTGAGTGGCCTGCACAGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTGTCCTGCATGGCATACACTGGGGACCCTATGCCCTaGGCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: LSCMAYTGDPMP*ACPAESVPSSL
Trigger: CAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CCGACTATCTGCTCTCTGCTAACAGAGGTCAGGGCATaGAGGCGGCCCTTGCTGTCCTGCATGGCATACACT +
Preference number: 6 (lower is better)
Translates to: PTICSLLTEVRA*RRPLLSCMAYT
Trigger: AGTGTATGCCATGCAGGACAGCAAGGGCCGCCTCCATGCCCTGACCTCTGTTAGCAGAGAGCAGATAGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp ACTCACTCATTGGGCAAGTCTCGAACAACCACCGGATaGTCTGCACATCGCCCTTTGGGGGTGCCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: THSLGKSRTTTG*SAHRPLGVPQA
Trigger: AGCCTGAGGCACCCCCAAAGGGCGATGTGCAGACCATCCGGTGGTTGTTCGAGACTTGCCCAATGAGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp TGCAGGCTCCCTCACAGTGGCCTCCAGTTCCTTGGCTaGCCCTGTCAGCTCGTCCAGTGGCTTTGTCTCAAA +
Preference number: 6 (lower is better)
Translates to: CRLPHSGLQFLG*PCQLVQWLCLK
Trigger: TTTGAGACAAAGCCACTGGACGAGCTGACAGGGCAAGCCAAGGAACTGGAGGCCACTGTGAGGGAGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp TTGGAAGTGGCTGTTGGGGTGGGGCCCTGCTTGTGCTaGTTCAGAACTTGCTGGTGCAGGCTCTGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: LEVAVGVGPCLC*FRTCWCRLWAS
Trigger: TGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCAGGGCCCCACCCCAACAGCCACTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp AGGGTAGAGGCTGGATGCAAGGGTCTCTCTTGGCTGATGGGGTGTTaGTGGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTCGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: RVEAGCKGLSWLMGC*WSVAAVVSGFVVPL
Trigger: CAGAGGAACGACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCATCCAGCCTCTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp AGGTCCTGTCACAGCAGCAAGGGTCTCTCTTGGCTGATGGGGTGTTaGTGGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTCGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: RSCHSSKGLSWLMGC*WSVAAVVSGFVVPL
Trigger: CAGAGGAACGACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCTGCTGTGACAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS TCA 72 bp GGCCTGAAAAACCTCTTTCTGACGAGACACCTGCCCTaGAGGGATCTCCACGCGGCTGCAGTATCTCACAGG +
Preference number: 6 (lower is better)
Translates to: GLKNLFLTRHLP*RDLHAAAVSHR
Trigger: CCTGTGAGATACTGCAGCCGCGTGGAGATCCCTTCAGGGCAGGTGTCTCGTCAGAAAGAGGTTTTTCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp TGGCATCCAGTCTCCAGTTCTCAAAGATCCAGCGCATaGACTGAACGTCACCCTCGGTGGGTTCCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: WHPVSSSQRSSA*TERHPRWVPQS
Trigger: GCTCTGAGGAACCCACCGAGGGTGACGTTCAGTGCATGCGCTGGATCTTTGAGAACTGGAGACTGGATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp TGCATGGCATACACTGGGGACCCTATGCCCTGGGCCTaGCCAGCAGAATCAGTTCCTTCTTCTCTGCTTGGA +
Preference number: 6 (lower is better)
Translates to: CMAYTGDPMPWA*PAESVPSSLLG
Trigger: TCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCCCAGGGCATAGGGTCCCCAGTGTATGCCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp TCAGCCTTGGCTGTGGGATCTGTGACCTCTGACCCCTaGTTTTCGGCCAACTCACTCATTGGGCAAGTCTCG +
Preference number: 6 (lower is better)
Translates to: SALAVGSVTSDP*FSANSLIGQVS
Trigger: CGAGACTTGCCCAATGAGTGAGTTGGCCGAAAAGCAGGGGTCAGAGGTCACAGATCCCACAGCCAAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS GCA 72 bp ACCCAGCGATTACCCGGGGCTCCTGTTCTTCCTTCTTaGCTGCCTCCAGGGCCTGAAAAACCTCTTTCTGAC +
Preference number: 6 (lower is better)
Translates to: TQRLPGAPVLPS*LPPGPEKPLSD
Trigger: GTCAGAAAGAGGTTTTTCAGGCCCTGGAGGCAGGCAAGAAGGAAGAACAGGAGCCCCGGGTAATCGCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp GGCCTGCCCAGCAGAATCAGTTCCTTCTTCTCTGCTTaGACTCCCATGGGCCAGAACCTCACCCTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: GLPSRISSFFSA*TPMGQNLTLSN
Trigger: ATTGGACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTGATTCTGCTGGGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTCAGGGTCCATGTCTTCAATATTCCCACTGCTGCCTaGAGTTGGCAGCCTCAGCGGCTTGAGTTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LRVHVFNIPTAA*SWQPQRLELEL
Trigger: CAGCTCCAACTCAAGCCGCTGAGGCTGCCAACTCCAGGCAGCAGTGGGAATATTGAAGACATGGACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp GCTGGATGCAAGGGTCTCTCTTGGCTGATGGGGTGTTaGTGGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTC +
Preference number: 6 (lower is better)
Translates to: AGCKGLSWLMGC*WSVAAVVSGFV
Trigger: GACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCATCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp GTGGATGTGCCTGTAGAGGCGGCGGAGCTCACTAGCTaGCCGCTGCTGATGGAACTTGGAGAAGGATTCCTT +
Preference number: 6 (lower is better)
Translates to: VDVPVEAAELTS*PLLMELGEGFL
Trigger: AAGGAATCCTTCTCCAAGTTCCATCAGCAGCGGCAAGCTAGTGAGCTCCGCCGCCTCTACAGGCACATCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp CACAGCAGCAAGGGTCTCTCTTGGCTGATGGGGTGTTaGTGGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTC +
Preference number: 6 (lower is better)
Translates to: HSSKGLSWLMGC*WSVAAVVSGFV
Trigger: GACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS TCA 72 bp GCGCAGGACTTGGCAGATGATCCTGGGAAGTTCACCTaGCACCAGCTCCTCCTTTCGTATATAAGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: AQDLADDPGKFT*HQLLLSYIRVP
Trigger: GGGCACCCTTATATACGAAAGGAGGAGCTGGTGTCAGGTGAACTTCCCAGGATCATCTGCCAAGTCCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp GGATGCAAGGGTCTCTCTTGGCTGATGGGGTGTTTGTaGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTCGTT +
Preference number: 6 (lower is better)
Translates to: GCKGLSWLMGCL*SVAAVVSGFVV
Trigger: AACGACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp TCGGGTCTCAAACAGATGCTGCTGCTGCTGAACATCTaGACCAGGTGGGATAAGGTCTGGGGATGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SGLKQMLLLLNI*TRWDKVWGWLE
Trigger: TTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCTGTTTGAGACCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AAGCATCCAGGGGCTTTGTTTCAAATAGCCACAGGGTaGAGCGGACATCACCAGGGACCACTTCCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: KHPGALFQIATG*SGHHQGPLPPW
Trigger: CCAAGGAGGAAGTGGTCCCTGGTGATGTCCGCTCCACCCTGTGGCTATTTGAAACAAAGCCCCTGGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp TGCTTGTGCTTGTTCAGAACTTGCTGGTGCAGGCTCTaGGCTTCAGCTGTTGCCATCCGCAGACTCTGCATG +
Preference number: 6 (lower is better)
Translates to: CLCLFRTCWCRL*ASAVAIRRLCM
Trigger: CATGCAGAGTCTGCGGATGGCAACAGCTGAAGCCCAGAGCCTGCACCAGCAAGTTCTGAACAAGCACAAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AGCAGCAAGGGTCTCTCTTGGCTGATGGGGTGTTTGTaGTCTGTAGCAGCTGTGGTCTCAGGGTTCGTCGTT +
Preference number: 6 (lower is better)
Translates to: SSKGLSWLMGCL*SVAAVVSGFVV
Trigger: AACGACGAACCCTGAGACCACAGCTGCTACAGACCACAAACACCCCATCAGCCAAGAGAGACCCTTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421646.1
CDS CCA 72 bp ACATCTGGACCAGGTGGGATAAGGTCTGGGGATGGCTaGAAGTCCTTCTCATCTACCAAGATCTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: TSGPGGIRSGDG*KSFSSTKISRM
Trigger: CATCCGGGAGATCTTGGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTGAACATCTGGACCAGGTGGGATAAGGTCTGGGGATaGCTGGAAGTCCTTCTCATCTACCAAGATCTCCCG +
Preference number: 6 (lower is better)
Translates to: LNIWTRWDKVWG*LEVLLIYQDLP
Trigger: CGGGAGATCTTGGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp AAACAGATGCTGCTGCTGCTGAACATCTGGACCAGGTaGGATAAGGTCTGGGGATGGCTGGAAGTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: KQMLLLLNIWTR*DKVWGWLEVLL
Trigger: GAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAGCAGCATCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp GCAGAATCAGTTCCTTCTTCTCTGCTTGGACTCCCATaGGCCAGAACCTCACCCTGTCCAATGCTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: AESVPSSLLGLP*ARTSPCPMLSK
Trigger: CTTGGACAGCATTGGACAGGGTGAGGTTCTGGCCCATGGGAGTCCAAGCAGAGAAGAAGGAACTGATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CCCATGGGACAATTCTCAAAAAGCCAAGTGAACTTGTaGACAGAACCCGCGGGGATGGACCCAGCGATTACC +
Preference number: 6 (lower is better)
Translates to: PMGQFSKSQVNL*TEPAGMDPAIT
Trigger: GGTAATCGCTGGGTCCATCCCCGCGGGTTCTGTCCACAAGTTCACTTGGCTTTTTGAGAATTGTCCCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CCA 72 bp CTCTGGAGGTTCTTGTTCAAATTGGTTCTGTTCTGCTaGCTCCAACAGACACCTTCTTGCTGCCCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: LWRFLFKLVLFC*LQQTPSCCPGS
Trigger: GGAGCCAGGGCAGCAAGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAATTTGAACAAGAACCTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS CCA 72 bp CTGCTGCTGAACATCTGGACCAGGTGGGATAAGGTCTaGGGATGGCTGGAAGTCCTTCTCATCTACCAAGAT +
Preference number: 6 (lower is better)
Translates to: LLLNIWTRWDKV*GWLEVLLIYQD
Trigger: ATCTTGGTAGATGAGAAGGACTTCCAGCCATCCCCAGACCTTATCCCACCTGGTCCAGATGTTCAGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 90 bp CTGTGGTCTCAGGGTTCGTCGTTCCTCTGGAGGTTCTTGTTCAAATaGGTTCTGTTCTGCTGGCTCCAACAGACACCTTCTTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: LWSQGSSFLWRFLFK*VLFCWLQQTPSCCP
Trigger: AGGGCAGCAAGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAATTTGAACAAGAACCTCCAGAGGAACGACGAACCCTGAGACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS TCA 72 bp CCACTCGCTGTAGGTGACCCACTTGGACCTTGTCTCTaGAAGCATCCAGGGGCTTTGTTTCAAATAGCCACA +
Preference number: 6 (lower is better)
Translates to: PLAVGDPLGPCL*KHPGALFQIAT
Trigger: TGTGGCTATTTGAAACAAAGCCCCTGGATGCTTTCAGAGACAAGGTCCAAGTGGGTCACCTACAGCGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340369.4
ENST00000396251.1
CDS CAA 72 bp CAGGGTTCGTCGTTCCTCTGGAGGTTCTTGTTCAAATaGGTTCTGTTCTGCTGGCTCCAACAGACACCTTCT +
Preference number: 6 (lower is better)
Translates to: QGSSFLWRFLFK*VLFCWLQQTPS
Trigger: AGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAATTTGAACAAGAACCTCCAGAGGAACGACGAACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1
CDS CCA 72 bp AGGGTTCGTCGTTCCTCTGGAGGTTCTTGTTCAAATTaGTTCTGTTCTGCTGGCTCCAACAGACACCTTCTT +
Preference number: 6 (lower is better)
Translates to: RVRRSSGGSCSN*FCSAGSNRHLL
Trigger: AAGAAGGTGTCTGTTGGAGCCAGCAGAACAGAACCAATTTGAACAAGAACCTCCAGAGGAACGACGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340369.4
ENST00000396251.1
ENST00000421646.1