RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XIAP (Homo sapiens)

Ensembl gene IDs: ENSG00000101966

Ensembl transcript IDs: ENST00000355640.3, ENST00000371199.8, ENST00000434753.7

Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCAGGTCAAGACAAACCCACAGAGAGGTAAAAGGGTATTAGGATaGGAGTTCATATTTACAGCAGGAACTTTACATACATGGTCTCCT +
Preference number: 1 (lower is better)
Translates to: FQVKTNPQRGKRVLG*EFIFTAGTLHTWSP
Trigger: AGGAGACCATGTATGTAAAGTTCCTGCTGTAAATATGAACTCCCATCCTAATACCCTTTTACCTCTCTGTGGGTTTGTCTTGACCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGCACTCCAGCCTGGGTaGCAAGCAAGACTCCATCTC +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARALQPG*QARLHL
Trigger: GAGATGGAGTCTTGCTTGTCACCCAGGCTGGAGTGC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGGCACGAGAATCGCTTaGACCCAGAAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARGTRIA*TQKAEV
Trigger: AACCTCCGCCTTCTGGGTTCAAGCGATTCTCGTGCC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCCAGAAGGCGGAGGTTaGAGTGAGCAGAGATCACTC +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARPEGGG*SEQRSL
Trigger: GAGTGATCTCTGCTCACTGCAACCTCCGCCTTCTGG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTTGCCCAGGCTGGAGTaGAGTGGCGAGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDLPRLE*SGEISA
Trigger: AGCCGAGATCTCGCCACTGCACTCCAGCCTGGGCAA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCACTCCAGCCTGGGTaGCAAGCAAGACTCCATCTC +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDALQPG*QARLHL
Trigger: GAGATGGAGTCTTGCTTGTCACCCAGGCTGGAGTGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGGCACGAGAATCGCTTaGACCCAGAAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDGTRIA*TQKAEV
Trigger: AACCTCCGCCTTCTGGGTTCAAGCGATTCTCGTGCC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTCTACATGTAGACACTaGGAACTCTTGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARSTCRH*ELLGGG
Trigger: TCCCCCTCCCAAGAGTTCTCAGTGTCTACATGTAGA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCGACTATGGGCATGTaGCACCACGCCTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDATMGM*HHAWLT
Trigger: TGTTAGCCAGGCGTGGTGGCACATGCCCATAGTCGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTTGCCCAGGCTGGAGTaGAATGGCACGATCTTCGCT +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDLPRLE*NGTIFA
Trigger: AGCGAAGATCGTGCCATTGCACTCCAGCCTGGGCAA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCAGGCTGGAGTGCAATaGCACGATCTTCGCTCACCA +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDQAGVQ*HDLRSP
Trigger: TGGTGAGCGAAGATCGTGCCATTGCACTCCAGCCTG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAAAATTAGTCGGGCATaGTGGCACCTGCCTGTAATT +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARKISRA*WHLPVI
Trigger: AATTACAGGCAGGTGCCACCATGCCCGACTAATTTT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCTGCCTCAAATTCATaGGCTCAAGTGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDAASNS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCATGAATTTGAGGCAGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGCCACATCAGCGTTGTaGATTAAATTTCACAACTCA +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARATSAL*IKFHNS
Trigger: TGAGTTGTGAAATTTAATGCACAACGCTGATGTGGC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACATGTGCCACCACGCCTaGCTAACATTTGTATTGACC +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDMCHHA*LTFVLT
Trigger: GGTCAATACAAATGTTAGCCAGGCGTGGTGGCACAT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAAGTCTCCAAAAATTTaGTTAGAAGTTGGAGTGCTG +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARKSPKI*LEVGVL
Trigger: CAGCACTCCAACTTCTAATCAAATTTTTGGAGACTT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCAAAACCCACAGATATaGAGGGCTGGCTATATATGC +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDQNPQI*RAGYIC
Trigger: GCATATATAGCCAGCCCTTCATATCTGTGGGTTTTG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACAAAATTAGTCGGGCATaGTGGCACCTGCCTGTAATT +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDKISRA*WHLPVI
Trigger: AATTACAGGCAGGTGCCACCATGCCCGACTAATTTT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTTTTGCGGAATTAGATaGAAAAGATCCGGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARFCGIR*KRSGAF
Trigger: AAAAGCACCGGATCTTTTCCATCTAATTCCGCAAAA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCCTCACCTGTAAAATaGAAGAACTGGATACTCTCT +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDASPVK*KNWILS
Trigger: AGAGAGTATCCAGTTCTTTCATTTTACAGGTGAGGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACAGGGCTGGCTATATATaGATTGATGATTGTCCTATT +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRAGYI*IDDCPI
Trigger: AATAGGACAATCATCAATGCATATATAGCCAGCCCT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAAAATTAGTCGGGCATaGTGGCACCTGCCTGTAATT +
Preference number: 2 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTKISRA*WHLPVI
Trigger: AATTACAGGCAGGTGCCACCATGCCCGACTAATTTT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTTTTCAATTCCTCCTTaGTTGAATCCATGGATGCAA +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDFSIPP*LNPWMQ
Trigger: TTGCATCCATGGATTCAACCAAGGAGGAATTGAAAA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACAAAAGGGTATTAGGATaGGAGTTCATATTTACAGCA +
Preference number: 2 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDKRVLG*EFIFTA
Trigger: TGCTGTAAATATGAACTCCCATCCTAATACCCTTTT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGCCACATCAGCGTTGTaGATTAAATTTCACAACTCA +
Preference number: 2 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTATSAL*IKFHNS
Trigger: TGAGTTGTGAAATTTAATGCACAACGCTGATGTGGC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTTTTGCGGAATTAGATaGAAAAGATCCGGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTFCGIR*KRSGAF
Trigger: AAAAGCACCGGATCTTTTCCATCTAATTCCGCAAAA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAGGCACGAGAATCGCTaGAACCCAGAAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARRHENR*NPEGGG
Trigger: ACCTCCGCCTTCTGGGTTCAAGCGATTCTCGTGCCT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCTTGAGGTCAGGAGTTaGATACCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARLEVRS*IPAWPT
Trigger: TGTTGGCCAGGCTGGTATCAAACTCCTGACCTCAAG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAGGCACGAGAATCGCTaGAACCCAGAAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTRHENR*NPEGGG
Trigger: ACCTCCGCCTTCTGGGTTCAAGCGATTCTCGTGCCT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCTTGAGGTCAGGAGTTaGATACCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTLEVRS*IPAWPT
Trigger: TGTTGGCCAGGCTGGTATCAAACTCCTGACCTCAAG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACACATACATGGTCTCCTaGAGCTCTTGCAACCTTGTA +
Preference number: 3 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDTYMVS*SSCNLV
Trigger: TACAAGGTTGCAAGAGCTCAAGGAGACCATGTATGT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR GCA 72 bp CCAGTCAGGGCTCTGCTACTAATTAGCTATAATCTTTaGACAAATTACATCACCTTTGAGTCTCAGTTGCCT +
Preference number: 3 (lower is better)
Translates to: PVRALLLISYNL*TNYITFESQLP
Trigger: AGGCAACTGAGACTCAAAGGTGATGTAATTTGTGCAAAGATTATAGCTAATTAGTAGCAGAGCCCTGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR CCA 72 bp AAGACAAACCCACAGAGAGGTAAAAGGGTATTAGGATaGGAGTTCATATTTACAGCAGGAACTTTACATACA +
Preference number: 3 (lower is better)
Translates to: KTNPQRGKRVLG*EFIFTAGTLHT
Trigger: TGTATGTAAAGTTCCTGCTGTAAATATGAACTCCCATCCTAATACCCTTTTACCTCTCTGTGGGTTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTTAGCCACATCAGCGTaGTGCATTAAATTTCACAAC +
Preference number: 3 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTLATSA*CIKFHN
Trigger: GTTGTGAAATTTAATGCACAACGCTGATGTGGCTAA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR GCA 72 bp CATACTTTGATCTGGCTCAGACTATACATAGTGTTTTaGCACTTGCATTTTACACTTAACATATCTTTGACA +
Preference number: 3 (lower is better)
Translates to: HTLIWLRLYIVF*HLHFTLNISLT
Trigger: TGTCAAAGATATGTTAAGTGTAAAATGCAAGTGGCAAAACACTATGTATAGTCTGAGCCAGATCAAAGTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGCGGTGGCGCCATCTTaGCTCCCTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARAVAPS*LPATSA
Trigger: GGCGGAGGTTGCAGGGAGCCAAGATGGCGCCACCGC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCCACCCCTGATGGGCTaGCGCGGCCTTCCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDPPLMG*RGLPAL
Trigger: GAGGGCGGGAAGGCCGCGCCAGCCCATCAGGGGTGG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355640.3
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAGGCGTGAGCCACCGTaGCCGGCGCCATTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARRREPP*PAPFVY
Trigger: GTAGACAAATGGCGCCGGGCACGGTGGCTCACGCCT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGCCATCTTGGCTCCCTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARAILAP*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGGGAGCCAAGATGGC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCCACCCACCCACGCCTaGCGTCGGCAGTCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDPPTHA*RRQSEE
Trigger: TTCCTCGGACTGCCGACGGCAGGCGTGGGTGGGTGG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355640.3
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTCACCTAGGCTGGAGTaGGGTGGCGCCATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARSPRLE*GGAILA
Trigger: AGCCAAGATGGCGCCACCGCACTCCAGCCTAGGTGA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCGGTGGCGCCATCTTaGCTCCCTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDAVAPS*LPATSA
Trigger: GGCGGAGGTTGCAGGGAGCCAAGATGGCGCCACCGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGTCCACCTTTTCACTTaGGCCGGGCGTCCCTCGATG +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARVHLFT*AGRPSM
Trigger: CATCGAGGGACGCCCGGCCCAAGTGAAAAGGTGGAC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434753.7
CDS-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGGCAGGCAGATCACCTaGGATCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARGRQIT*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAGGTGATCTGCCTGCC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCGACCCCCTAGGACCTaGGGACGCTTAAGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARRPPRT*GRLSPL
Trigger: TAAGGGACTTAAGCGTCCTCAGGTCCTAGGGGGTCG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGCGACTATGGGCATGTaGCACCACGCCTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARATMGM*HHAWLT
Trigger: TGTTAGCCAGGCGTGGTGGCACATGCCCATAGTCGC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTACAGCCGGCCCGAACTaGCCCGCGGCGATCGGCTCG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTTAGPN*PAAIGS
Trigger: CGAGCCGATCGCCGCGGGGCAGTTCGGGCCGGCTGT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371199.8
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCTGGTCTCCAACTCCTaGCCTCAGGTGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDLVSNS*PQVSRL
Trigger: CAGGCGGCTCACCTGAGGTCAGGAGTTGGAGACCAG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTTGCCCAGGCTGGAGTaGAATGGCACGATCTTCGCT +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARLPRLE*NGTIFA
Trigger: AGCGAAGATCGTGCCATTGCACTCCAGCCTGGGCAA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTGCCTCCAGAGTAGCTaGGACTATGGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARCLQSS*DYGHVP
Trigger: TGGCACATGCCCATAGTCGCAGCTACTCTGGAGGCA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCTCAGCCTCGGAAACTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARLSLGN*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCAGTTTCCGAGGCTGAG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCCATCTTGGCTCCCTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDAILAP*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGGGAGCCAAGATGGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCCGGCCCGAGGGAAGTaGAGGGGAAAAGAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDPARGK*RGKEEG
Trigger: CCCCTCTTCTTTTCCCCTCCACTTCCCTCGGGCCGG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355640.3
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCAGGCTGGAGTGCAATaGCACGATCTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARQAGVQ*HDLRSP
Trigger: TGGTGAGCGAAGATCGTGCCATTGCACTCCAGCCTG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAGTCGCTCTAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARSRSSS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCCCAGCTACTAGAGCGACT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR CAA 72 bp CGTGCCCGGCGCCATTTGTCTACTTTGAAGATACAATaGTCCCTTGCTATCCCTGGGGTTTTGGTTTCACGA +
Preference number: 4 (lower is better)
Translates to: RARRHLSTLKIQ*SLAIPGVLVSR
Trigger: TCGTGAAACCAAAACCCCAGGGATAGCAAGGGACAATTGTATCTTCAAAGTAGACAAATGGCGCCGGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGCGGTGGCGCCATCTTaGCTCCCTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTAVAPS*LPATSA
Trigger: GGCGGAGGTTGCAGGGAGCCAAGATGGCGCCACCGC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGGCAGGCAGATCACCTaGGATCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDGRQIT*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAGGTGATCTGCCTGCC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCGACCCCCTAGGACCTaGGGACGCTTAAGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRPPRT*GRLSPL
Trigger: TAAGGGACTTAAGCGTCCTCAGGTCCTAGGGGGTCG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTGGCCCCAGCCTAGGTaGAGGAAACGGAAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDWPQPR*RKRKSL
Trigger: AAGGGACTTCCGTTTCCTTCACCTAGGCTGGGGCCA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371199.8
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGTAGAGACAGGGTTTTaGCTTTTGTCCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARVETGF*LLSRLA
Trigger: TGCCAGCCTGGACAAAAGGCAAAACCCTGTCTCTAC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTATGATCATAGCTCAATaGAGCCTCTGCCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARMIIAQ*SLCLPD
Trigger: GTCTGGGAGGCAGAGGCTGCATTGAGCTATGATCAT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCCAAGATTGTGCCATTaGACTCCATCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARPRLCH*TPSWAT
Trigger: TGTTGCCCAGGATGGAGTGCAATGGCACAATCTTGG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCATGAGCCAAGATTGTaGCATTGCACTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARHEPRL*HCTPSW
Trigger: CCAGGATGGAGTGCAATGGCACAATCTTGGCTCATG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGCTGCCTCAAATTCATaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARAASNS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCATGAATTTGAGGCAGC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCTGGTCTCCAACTCCTaGCCTCAGGTGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTLVSNS*PQVSRL
Trigger: CAGGCGGCTCACCTGAGGTCAGGAGTTGGAGACCAG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACAGAAACCCGGAGTCGTaGAACCCGAAGTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRNPES*NPKCVH
Trigger: GTGGACACACTTCGGGTTTCACGACTCCGGGTTTCT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371199.8
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTGCCTCCAGAGTAGCTaGGACTATGGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDCLQSS*DYGHVP
Trigger: TGGCACATGCCCATAGTCGCAGCTACTCTGGAGGCA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGTAGTCCCAGCTGCTTaGGAGGCAGAGTTTGCCATG +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDVVPAA*EAEFAM
Trigger: CATGGCAAACTCTGCCTCGCAAGCAGCTGGGACTAC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAGGCGTGAGCCACCGTaGCCGGCGCCATTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTRREPP*PAPFVY
Trigger: GTAGACAAATGGCGCCGGGCACGGTGGCTCACGCCT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGCCATCTTGGCTCCCTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTAILAP*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGGGAGCCAAGATGGC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTATGTGCCACCACGCCTaGCTAACATTTGTATTGACC +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARMCHHA*LTFVLT
Trigger: GGTCAATACAAATGTTAGCCAGGCGTGGTGGCACAT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCAAAACCCACAGATATaGAGGGCTGGCTATATATGC +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARQNPQI*RAGYIC
Trigger: GCATATATAGCCAGCCCTTCATATCTGTGGGTTTTG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCCATCTATCTACAGCTaGATGACAACTAAAGCACCG +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARPSIYS*MTTKAP
Trigger: CGGTGCTTTAGTTGTCATGCAGCTGTAGATAGATGG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTTGCCCAGGCTGGAGTaGAGTGGCGAGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTLPRLE*SGEISA
Trigger: AGCCGAGATCTCGCCACTGCACTCCAGCCTGGGCAA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGATACAATTGTCCCTTaGTATCCCTGGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARDTIVP*YPWGFG
Trigger: ACCAAAACCCCAGGGATAGCAAGGGACAATTGTATC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTCACCTAGGCTGGAGTaGGGTGGCGCCATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTSPRLE*GGAILA
Trigger: AGCCAAGATGGCGCCACCGCACTCCAGCCTAGGTGA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGTAATCCCAGCACTTTaGGAGATGAATCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARVIPAL*EMNHLR
Trigger: CCTCAAGTGATTCATCTCCCAAAGTGCTGGGATTAC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCTATCTACAGCTGCATaGCAACTAAAGCACCGCACG +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDLSTAA*QLKHRT
Trigger: CGTGCGGTGCTTTAGTTGTCATGCAGCTGTAGATAG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGCACTCCAGCCTGGGTaGCAAGCAAGACTCCATCTC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTALQPG*QARLHL
Trigger: GAGATGGAGTCTTGCTTGTCACCCAGGCTGGAGTGC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGGCACGAGAATCGCTTaGACCCAGAAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTGTRIA*TQKAEV
Trigger: AACCTCCGCCTTCTGGGTTCAAGCGATTCTCGTGCC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTCTACATGTAGACACTaGGAACTCTTGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDSTCRH*ELLGGG
Trigger: TCCCCCTCCCAAGAGTTCTCAGTGTCTACATGTAGA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGCCTCACCTGTAAAATaGAAGAACTGGATACTCTCT +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARASPVK*KNWILS
Trigger: AGAGAGTATCCAGTTCTTTCATTTTACAGGTGAGGC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGGCAGGCAGATCACCTaGGATCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTGRQIT*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAGGTGATCTGCCTGCC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCGACCCCCTAGGACCTaGGGACGCTTAAGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTRPPRT*GRLSPL
Trigger: TAAGGGACTTAAGCGTCCTCAGGTCCTAGGGGGTCG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGTAGAGACAGGGTTTTaGCTTTTGTCCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDVETGF*LLSRLA
Trigger: TGCCAGCCTGGACAAAAGGCAAAACCCTGTCTCTAC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACATGATCATAGCTCAATaGAGCCTCTGCCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDMIIAQ*SLCLPD
Trigger: GTCTGGGAGGCAGAGGCTGCATTGAGCTATGATCAT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTCACCCAGGCTGGAATaGAGTGCCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDSPRLE*SAMIIA
Trigger: AGCTATGATCATGGCACTGCATTCCAGCCTGGGTGA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCCAAGATTGTGCCATTaGACTCCATCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDPRLCH*TPSWAT
Trigger: TGTTGCCCAGGATGGAGTGCAATGGCACAATCTTGG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCATGAGCCAAGATTGTaGCATTGCACTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDHEPRL*HCTPSW
Trigger: CCAGGATGGAGTGCAATGGCACAATCTTGGCTCATG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGCCCCAATCTGGAAATaGCAACTCCGCTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTAPIWK*QLRSAA
Trigger: AGCCGCAGAGCGGAGTTGGCATTTCCAGATTGGGGC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371199.8
CDS-3UTR TCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTATTCTTCTTCCTTATTaGTGTCTGCAGGTACACAAG +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARILLPY*CLQVHK
Trigger: CTTGTGTACCTGCAGACATCAATAAGGAAGAAGAAT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCGGGTATATGGTGTCTaGTATATCTACAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRVYGV*YIYNLP
Trigger: GGGCAGGTTGTAGATATATCAGACACCATATACCCG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCCAGAAGGCGGAGGTTaGAGTGAGCAGAGATCACTC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTPEGGG*SEQRSL
Trigger: GAGTGATCTCTGCTCACTGCAACCTCCGCCTTCTGG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTTGCCCAGGCTGGAGTaGAATGGCACGATCTTCGCT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTLPRLE*NGTIFA
Trigger: AGCGAAGATCGTGCCATTGCACTCCAGCCTGGGCAA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTGCCTCCAGAGTAGCTaGGACTATGGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTCLQSS*DYGHVP
Trigger: TGGCACATGCCCATAGTCGCAGCTACTCTGGAGGCA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCCTTTGAGTCTCAGTTaGCTCACCTGTAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARPLSLS*LTCKMK
Trigger: TTTCATTTTACAGGTGAGGCAACTGAGACTCAAAGG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGTAGTCCCAGCTGCTTaGGAGGCAGAGTTTGCCATG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTVVPAA*EAEFAM
Trigger: CATGGCAAACTCTGCCTCGCAAGCAGCTGGGACTAC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCTCAGCCTCGGAAACTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTLSLGN*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCAGTTTCCGAGGCTGAG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAGTCGCTCTAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTSRSSS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCCCAGCTACTAGAGCGACT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCCACAACAAAAGCACTaGACTTGGTCACCAATACCT +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDPQQKH*TWSPIP
Trigger: AGGTATTGGTGACCAAGTGCAGTGCTTTTGTTGTGG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAGGGCTGGCTATATATaGATTGATGATTGTCCTATT +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARRAGYI*IDDCPI
Trigger: AATAGGACAATCATCAATGCATATATAGCCAGCCCT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTTTTCAATTCCTCCTTaGTTGAATCCATGGATGCAA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARFSIPP*LNPWMQ
Trigger: TTGCATCCATGGATTCAACCAAGGAGGAATTGAAAA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCTATCTACAGCTGCATaGCAACTAAAGCACCGCACG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTLSTAA*QLKHRT
Trigger: CGTGCGGTGCTTTAGTTGTCATGCAGCTGTAGATAG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCATGAGCCAAGATTGTaGCATTGCACTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTHEPRL*HCTPSW
Trigger: CCAGGATGGAGTGCAATGGCACAATCTTGGCTCATG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTATAATCTGCCATGGATaGATTTCTTGGAAGATTTGT +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARIICHG*ISWKIC
Trigger: ACAAATCTTCCAAGAAATCCATCCATGGCAGATTAT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAAAAGGGTATTAGGATaGGAGTTCATATTTACAGCA +
Preference number: 4 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARKRVLG*EFIFTA
Trigger: TGCTGTAAATATGAACTCCCATCCTAATACCCTTTT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACATTCTTCTTCCTTATTaGTGTCTGCAGGTACACAAG +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDILLPY*CLQVHK
Trigger: CTTGTGTACCTGCAGACATCAATAAGGAAGAAGAAT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCCACATCAGCGTTGTaGATTAAATTTCACAACTCA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDATSAL*IKFHNS
Trigger: TGAGTTGTGAAATTTAATGCACAACGCTGATGTGGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTATGTGCCACCACGCCTaGCTAACATTTGTATTGACC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTMCHHA*LTFVLT
Trigger: GGTCAATACAAATGTTAGCCAGGCGTGGTGGCACAT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACAAGTCTCCAAAAATTTaGTTAGAAGTTGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDKSPKI*LEVGVL
Trigger: CAGCACTCCAACTTCTAATCAAATTTTTGGAGACTT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCAAAACCCACAGATATaGAGGGCTGGCTATATATGC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTQNPQI*RAGYIC
Trigger: GCATATATAGCCAGCCCTTCATATCTGTGGGTTTTG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCCATCTATCTACAGCTaGATGACAACTAAAGCACCG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTPSIYS*MTTKAP
Trigger: CGGTGCTTTAGTTGTCATGCAGCTGTAGATAGATGG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACAGGCAAAATGATCTCTaGTTCCCAGATAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRQNDL*FPDSFQ
Trigger: TTGAAAACTATCTGGGAAGCAGAGATCATTTTGCCT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCCACAACAAAAGCACTaGACTTGGTCACCAATACCT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTPQQKH*TWSPIP
Trigger: AGGTATTGGTGACCAAGTGCAGTGCTTTTGTTGTGG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGATACAATTGTCCCTTaGTATCCCTGGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTDTIVP*YPWGFG
Trigger: ACCAAAACCCCAGGGATAGCAAGGGACAATTGTATC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTTTTGCGGAATTAGATaGAAAAGATCCGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDFCGIR*KRSGAF
Trigger: AAAAGCACCGGATCTTTTCCATCTAATTCCGCAAAA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCATAGTATATCCTACTaGTATACTAGCCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTHSISY*YTSPFP
Trigger: GGGAAAGGGGCTAGTATATCAGTAGGATATACTATG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGCCTCACCTGTAAAATaGAAGAACTGGATACTCTCT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTASPVK*KNWILS
Trigger: AGAGAGTATCCAGTTCTTTCATTTTACAGGTGAGGC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR CAA 72 bp CAGCAGGAACTTTACATACATGGTCTCCTTGAGCTCTaGCAACCTTGTAAGATAAGTATTATTTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: QQELYIHGLLEL*QPCKISIIFLS
Trigger: TGAAAGGAAAATAATACTTATCTTACAAGGTTGCAAGAGCTCAAGGAGACCATGTATGTAAAGTTCCTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCCTTTGAGTCTCAGTTaGCTCACCTGTAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTPLSLS*LTCKMK
Trigger: TTTCATTTTACAGGTGAGGCAACTGAGACTCAAAGG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR TCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAAGTCTCCAAAAATTTaGTTAGAAGTTGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTKSPKI*LEVGVL
Trigger: CAGCACTCCAACTTCTAATCAAATTTTTGGAGACTT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAGGCAAAATGATCTCTaGTTCCCAGATAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTRQNDL*FPDSFQ
Trigger: TTGAAAACTATCTGGGAAGCAGAGATCATTTTGCCT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR GCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAGGGCTGGCTATATATaGATTGATGATTGTCCTATT +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTRAGYI*IDDCPI
Trigger: AATAGGACAATCATCAATGCATATATAGCCAGCCCT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTTTTCAATTCCTCCTTaGTTGAATCCATGGATGCAA +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTFSIPP*LNPWMQ
Trigger: TTGCATCCATGGATTCAACCAAGGAGGAATTGAAAA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
3UTR CAA 72 bp ACAATTCTTAAAATAAACTTGTTAGCCACATCAGCGTaGTGCATTAAATTTCACAACTCATGGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TILKINLLATSA*CIKFHNSWRGR
Trigger: TCTTCCTCTCCATGAGTTGTGAAATTTAATGCACAACGCTGATGTGGCTAACAAGTTTATTTTAAGAATTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CCA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTAAAAGGGTATTAGGATaGGAGTTCATATTTACAGCA +
Preference number: 4 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTKRVLG*EFIFTA
Trigger: TGCTGTAAATATGAACTCCCATCCTAATACCCTTTT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTGCGGTGGCGCCATCTaGGCTCCCTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARCGGAI*APCNLR
Trigger: GCGGAGGTTGCAGGGAGCCAAGATGGCGCCACCGCA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTGCGGTGGCGCCATCTaGGCTCCCTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDCGGAI*APCNLR
Trigger: GCGGAGGTTGCAGGGAGCCAAGATGGCGCCACCGCA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTGTCCACCTTTTCACTaGGGCCGGGCGTCCCTCGAT +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARCPPFH*GRASLD
Trigger: ATCGAGGGACGCCCGGCCCAAGTGAAAAGGTGGACA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCGTGCCCGGCGCCATTaGTCTACTTTGAAGATACAA +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARRARRH*STLKIQ
Trigger: TTGTATCTTCAAAGTAGACAAATGGCGCCGGGCACG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCACTTGCTAACTCTCTaGGGGTTAGGTGAGCATAGT +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARHLLTL*GLGEHS
Trigger: ACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACGCCAAGATTGTGCCATaGCACTCCATCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDAKIVP*HSILGN
Trigger: GTTGCCCAGGATGGAGTGCAATGGCACAATCTTGGC...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTAGATACAATTGTCCCTaGCTATCCCTGGGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARRYNCP*LSLGFW
Trigger: CCAAAACCCCAGGGATAGCAAGGGACAATTGTATCT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCTTGAGGTCAGGAGTTaGATACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDLEVRS*IPAWPT
Trigger: TGTTGGCCAGGCTGGTATCAAACTCCTGACCTCAAG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTACATACATGGTCTCCTaGAGCTCTTGCAACCTTGTA +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARTYMVS*SSCNLV
Trigger: TACAAGGTTGCAAGAGCTCAAGGAGACCATGTATGT...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTGTAATCCCAGCACTTaGGGAGATGAATCACTTGAG +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARCNPST*GDESLE
Trigger: CTCAAGTGATTCATCTCCCAAAGTGCTGGGATTACA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTCAATTCCTCCTTGGTaGAATCCATGGATGCAAAAC +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARSIPPW*NPWMQN
Trigger: GTTTTGCATCCATGGATTCAACCAAGGAGGAATTGA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTGTTTTCAATTCCTCCTaGGTTGAATCCATGGATGCA +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARVFNSS*VESMDA
Trigger: TGCATCCATGGATTCAACCAAGGAGGAATTGAAAAC...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTTGGGAGATGAATCACTaGAGGTCAGAAATTCAAGAC +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARWEMNH*RSEIQD
Trigger: GTCTTGAATTTCTGACCTCAAGTGATTCATCTCCCA...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCGTGCCCGGCGCCATTaGTCTACTTTGAAGATACAA +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRARRH*STLKIQ
Trigger: TTGTATCTTCAAAGTAGACAAATGGCGCCGGGCACG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCACTTGCTAACTCTCTaGGGGTTAGGTGAGCATAGT +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDHLLTL*GLGEHS
Trigger: ACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGCCAAGATTGTGCCATaGCACTCCATCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTAKIVP*HSILGN
Trigger: GTTGCCCAGGATGGAGTGCAATGGCACAATCTTGGC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACAGATACAATTGTCCCTaGCTATCCCTGGGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRYNCP*LSLGFW
Trigger: CCAAAACCCCAGGGATAGCAAGGGACAATTGTATCT...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GCCAAATCACATTATATACACTCACTACACCCACTCTACCCTACCTTAGCCCGTCATGCCCAGCTATTTTaGTATTTTTGTACAGACAGG +
Preference number: 5 (lower is better)
Translates to: AKSHYIHSLHPLYPTLARHAQLF*YFCTDR
Trigger: CCTGTCTGTACAAAAATACAAAAATAGCTGGGCATG...ACGGGCTAAGGTAGGGTAGAGTGGGTGTAGTGAGTGTATATAATGTGATTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCAAATTACATCACCTTaGAGTCTCAGTTGCCTCACC +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDQITSP*SLSCLT
Trigger: GGTGAGGCAACTGAGACTCAAAGGTGATGTAATTTG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTGGGAGATGAATCACTaGAGGTCAGAAATTCAAGAC +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDWEMNH*RSEIQD
Trigger: GTCTTGAATTTCTGACCTCAAGTGATTCATCTCCCA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCGTGCCCGGCGCCATTaGTCTACTTTGAAGATACAA +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTRARRH*STLKIQ
Trigger: TTGTATCTTCAAAGTAGACAAATGGCGCCGGGCACG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCACTTGCTAACTCTCTaGGGGTTAGGTGAGCATAGT +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTHLLTL*GLGEHS
Trigger: ACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACTTAGCCACATCAGCGTaGTGCATTAAATTTCACAAC +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDLATSA*CIKFHN
Trigger: GTTGTGAAATTTAATGCACAACGCTGATGTGGCTAA...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp GTTTTGCCTTTTGTCCAGGCTGGCATCATATACTTTAATTCATGTCCAGATGACCGCCATTTGTCTACTTaGAAGATACAATTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: VLPFVQAGIIYFNSCPDDRHLST*KIQLSL
Trigger: AAGGGACAATTGTATCTTCAAAGTAGACAAATGGCG...GTCATCTGGACATGAATTAAAGTATATGATGCCAGCCTGGACAAAAGGCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTACATACATGGTCTCCTaGAGCTCTTGCAACCTTGTA +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTTYMVS*SSCNLV
Trigger: TACAAGGTTGCAAGAGCTCAAGGAGACCATGTATGT...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCAAATTACATCACCTTaGAGTCTCAGTTGCCTCACC +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTQITSP*SLSCLT
Trigger: GGTGAGGCAACTGAGACTCAAAGGTGATGTAATTTG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTTCAATTCCTCCTTGGTaGAATCCATGGATGCAAAAC +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTSIPPW*NPWMQN
Trigger: GTTTTGCATCCATGGATTCAACCAAGGAGGAATTGA...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTGTTTTCAATTCCTCCTaGGTTGAATCCATGGATGCA +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTVFNSS*VESMDA
Trigger: TGCATCCATGGATTCAACCAAGGAGGAATTGAAAAC...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCGCCATTTGTCTACTTaGAAGATACAATTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTRHLST*KIQLSL
Trigger: AAGGGACAATTGTATCTTCAAAGTAGACAAATGGCG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7
CDS-3UTR CAA 90 bp AAATATCATAATACACAGGGCCAAATCACATTATATACACTCACTACACCCACTCATGCCCAGCTATTTTaGTATTTTTGTACAGACAGG +
Preference number: 5 (lower is better)
Translates to: KYHNTQGQITLYTLTTPTHAQLF*YFCTDR
Trigger: CCTGTCTGTACAAAAATACAAAAATAGCTGGGCATG...AGTGGGTGTAGTGAGTGTATATAATGTGATTTGGCCCTGTGTATTATGATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355640.3
ENST00000371199.8
ENST00000434753.7