Pregenerated sensors for XG (Homo sapiens)

Ensembl gene IDs: ENSG00000124343

Ensembl transcript IDs: ENST00000503018.1, ENST00000644266.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	ATCACCATAAAGGTCTTCATCCTTATCATCTTCCCATTGAGTAGATaGAGGGTTGGTCCTGCTGTCTCAGTAATGGCAGAGCCAGAAGCA	+
Preference number: 1 (lower is better) Translates to: ITIKVFILIIFPLSR*RVGPAVSVMAEPEA Trigger: TGCTTCTGGCTCTGCCATTACTGAGACAGCAGGACCAACCCTCCATCTACTCAATGGGAAGATGATAAGGATGAAGACCTTTATGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644266.2
3UTR CAA 90 bp	TGGAAGCGGATCACCATAAAGGTCTTCATCCTTATCATCTTCCCATaGAGTAGATGGAGGGTTGGTCCTGCTGTCTCAGTAATGGCAGAG	+
Preference number: 2 (lower is better) Translates to: WKRITIKVFILIIFP*SRWRVGPAVSVMAE Trigger: CTCTGCCATTACTGAGACAGCAGGACCAACCCTCCATCTACTCAATGGGAAGATGATAAGGATGAAGACCTTTATGGTGATCCGCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644266.2
3UTR CCA 72 bp	AGTAATGGCAGAGCCAGAAGCAAACTCACATACAGGTaGACATGTGCAGTTCAGCCCTGTGTTGTTCAAGGG	+
Preference number: 3 (lower is better) Translates to: SNGRARSKLTYR*TCAVQPCVVQG Trigger: CCCTTGAACAACACAGGGCTGAACTGCACATGTCCACCTGTATGTGAGTTTGCTTCTGGCTCTGCCATTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644266.2
3UTR CAA 72 bp	TCACATACAGGTGGACATGTGCAGTTCAGCCCTGTGTaGTTCAAGGGTCAGCTGTACAGTCAAGGTTATCCT	+
Preference number: 4 (lower is better) Translates to: SHTGGHVQFSPV*FKGQLYSQGYP Trigger: AGGATAACCTTGACTGTACAGCTGACCCTTGAACAACACAGGGCTGAACTGCACATGTCCACCTGTATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644266.2
3UTR CAA 72 bp	ATCACCATAAAGGTCTTCATCCTTATCATCTTCCCATaGAGTAGATGGAGGGTTGGTCCTGCTGTCTCAGTA	+
Preference number: 4 (lower is better) Translates to: ITIKVFILIIFP*SRWRVGPAVSV Trigger: TACTGAGACAGCAGGACCAACCCTCCATCTACTCAATGGGAAGATGATAAGGATGAAGACCTTTATGGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644266.2
CDS CAA 72 bp	AGTGGGGACGAAGTGGTGCTTCACTGTGGTTGTGATTaGCATTTCCCTAATCACCACATTTTGCTTTCAATA	+
Preference number: 6 (lower is better) Translates to: SGDEVVLHCGCD*HFPNHHILLSI Trigger: TATTGAAAGCAAAATGTGGTGATTAGGGAAATGCAAATCACAACCACAGTGAAGCACCACTTCGTCCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503018.1

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