Pregenerated sensors for XBP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000100219Ensembl transcript IDs: ENST00000216037.10, ENST00000344347.5, ENST00000403532.7, ENST00000405219.7, ENST00000482720.1, ENST00000484256.1, ENST00000611155.4
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGCGGGGCTCAGGTGCGTaGGGCGCTGTCGCTTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMRGSGA*GAVACA Trigger: CGCGCAAGCGACAGCGCCTCACGCACCTGAGCCCCG...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR TCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGACGGGGCTCAGGTGCGTaGGGCGCTGTCGCTTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRRGSGA*GAVACA Trigger: CGCGCAAGCGACAGCGCCTCACGCACCTGAGCCCCG...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGCGGCGGAGGCGGGCTaGCCCGACAGAAGCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMAAEAG*PDRSRT Trigger: AGTTCTGCTTCTGTCGGGGCAGCCCGCCTCCGCCGC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTCCTCGGGGCTCAGGTaGGTGAGGCGCTGTCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMSSGLR*VRRCRL Trigger: CAAGCGACAGCGCCTCACGCACCTGAGCCCCGAGGA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGGCCTGGAAGACAGGTaGCCGCATCCCCAGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMGLEDR*PHPQLW Trigger: CCAGAGCTGGGGATGCGGGCACCTGTCTTCCAGGCC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGACGGGTTCGGCGCGGCTaGCACCACCACCATAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRRVRRG*HHHHSS Trigger: GGAGCTATGGTGGTGGTGGCAGCCGCGCCGAACCCG...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGCGGCGGAGGCGGGCTaGCCCGACAGAAGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRAAEAG*PDRSRT Trigger: AGTTCTGCTTCTGTCGGGGCAGCCCGCCTCCGCCGC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGAGGTGCACGTAGTCTaGGTGCTGCGGACTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMEVHVV*VLRTQQ Trigger: CTGCTGAGTCCGCAGCACTCAGACTACGTGCACCTC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGATGTTCTGGAGGGGTaGCAACTGGGCCTGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMDVLEG*QLGLHL Trigger: CAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATCCTCGGGGCTCAGGTaGGTGAGGCGCTGTCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSSGLR*VRRCRL Trigger: CAAGCGACAGCGCCTCACGCACCTGAGCCCCGAGGA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGGCCTGCACCTGCTaGAGAGGTGCACGTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMWACTC*RGARSL Trigger: CAGACTACGTGCACCTCTGCAGCAGGTGCAGGCCCA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGGTGACAACTGGGCCTaGACCTGCTGCAGAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMGDNWA*TCCRGA Trigger: TGCACCTCTGCAGCAGGTGCAGGCCCAGTTGTCACC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGAGGGGTGACAACTaGGCCTGCACCTGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMWRGDN*ACTCCR Trigger: TCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGACCTAGGTTCCCAGCGTaGCGGATCCGGTCAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRPRFPA*RIRSVR Trigger: CCGGACTGACCGGATCCGCCACGCTGGGAACCTAGG...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGCACAGCAAGAGGGCCTaGAAGACAGGTGCCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMHSKRA*KTGARI Trigger: GATGCGGGCACCTGTCTTCCAGGCCCTCTTGCTGTG...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTCCGAGTTAAGAGGCTaGACCACCAGTCTGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMSELRG*TTSLRP Trigger: TGGCCGCAGACTGGTGGTTCAGCCTCTTAACTCGGA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGAACTGGGCCTGCACCTaGTGCAGAGGTGCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMNWACT*CRGARS Trigger: ACTACGTGCACCTCTGCAGCAGGTGCAGGCCCAGTT...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGATGTTCTGGAGGGGTaGCAACTGGGCCTGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRDVLEG*QLGLHL Trigger: CAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGAGAGGACATGTCACTaGATGGGGAAAGGGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMERTCH*MGKGNP Trigger: GGGGTTCCCTTTCCCCATTCAGTGACATGTCCTCTC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGGTGACAACTGGGCCTaGACCTGCTGCAGAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRGDNWA*TCCRGA Trigger: TGCACCTCTGCAGCAGGTGCAGGCCCAGTTGTCACC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATGGAGGGGTGACAACTaGGCCTGCACCTGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRWRGDN*ACTCCR Trigger: TCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTACCGCCAGAATCCATaGGGAGATGTTCTGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMYRQNP*GDVLEG Trigger: CCCCTCCAGAACATCTCCCCATGGATTCTGGCGGTA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGCCGCATCCCCAGCTCTaGTCATCTCTAACGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMPHPQL*SSLTRE Trigger: CTCTCTCGTTAGAGATGACCAGAGCTGGGGATGCGG...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAAACTGGGCCTGCACCTaGTGCAGAGGTGCACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRNWACT*CRGARS Trigger: ACTACGTGCACCTCTGCAGCAGGTGCAGGCCCAGTT...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGGAGGCAAGCCAGGATaGCAAAAAGGGGGAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMGGKPG*QKGGRE Trigger: TTCTCTTCCCCCTTTTTGGCATCCTGGCTTGCCTCC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTCACTTCATTCCCCTTaGCTTCCGCCTCCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMSLHSP*LPPPLQ Trigger: CTGAAGAGGAGGCGGAAGCCAAGGGGAATGAAGTGA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGACATGGGGAGATGTTCTaGAGGGGTGACAACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRHGEMF*RGDNWA Trigger: GGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATG...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGAGGCTGGTAAGGAACTaGGTCCTTCTGGGTAGACCT | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMRLVRN*VLLGRP Trigger: AGGTCTACCCAGAAGGACCCAGTTCCTTACCAGCCT...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGGACATGTCACTGAATaGGGAAAGGGAACCCCCGTA | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMGHVTE*GKGTPV Trigger: TACGGGGGTTCCCTTTCCCCATTCAGTGACATGTCC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATACAGAAAAGAGCCCTaGGCCGCCCTAGGTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRYRKEP*AALGSQ Trigger: CTGGGAACCTAGGGCGGCCCAGGGCTCTTTTCTGTA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGAGAGGACATGTCACTaGATGGGGAAAGGGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRERTCH*MGKGNP Trigger: GGGGTTCCCTTTCCCCATTCAGTGACATGTCCTCTC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATACCGCCAGAATCCATaGGGAGATGTTCTGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRYRQNP*GDVLEG Trigger: CCCCTCCAGAACATCTCCCCATGGATTCTGGCGGTA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGACAATGAATTCAGGGTaGTCATTCTCTGAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMTMNSG*SFSEGL Trigger: CAGCCCCTCAGAGAATGATCACCCTGAATTCATTGT...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGGAGGCAAGCCAGGATaGCAAAAAGGGGGAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRGGKPG*QKGGRE Trigger: TTCTCTTCCCCCTTTTTGGCATCCTGGCTTGCCTCC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATCACTTCATTCCCCTTaGCTTCCGCCTCCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSLHSP*LPPPLQ Trigger: CTGAAGAGGAGGCGGAAGCCAAGGGGAATGAAGTGA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAAGGCTGGTAAGGAACTaGGTCCTTCTGGGTAGACCT | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRRLVRN*VLLGRP Trigger: AGGTCTACCCAGAAGGACCCAGTTCCTTACCAGCCT...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGGACATGTCACTGAATaGGGAAAGGGAACCCCCGTA | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRGHVTE*GKGTPV Trigger: TACGGGGGTTCCCTTTCCCCATTCAGTGACATGTCC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGTGTCCTCCCAAGAATaGTTTACACCAAGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMVSSQE*FTPSRE Trigger: CTCTCTGCTTGGTGTAAACCATTCTTGGGAGGACAC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGGGGAAAGAGTTCATTaGCAAAAGTGTCCTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMGERVH*QKCPPK Trigger: CTTGGGAGGACACTTTTGCCAATGAACTCTTTCCCC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTCAACTACAAGGCCATaGGTTTTCTCTCGTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMSTTRP*VFSRKS Trigger: GCTTTTACGAGAGAAAACTCATGGCCTTGTAGTTGA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAACAATGAATTCAGGGTaGTCATTCTCTGAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRTMNSG*SFSEGL Trigger: CAGCCCCTCAGAGAATGATCACCCTGAATTCATTGT...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTCTGGCAGTCTGAGCTaGTACTCTGTTTTTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMSGSLS*YSVFQF Trigger: AAACTGAAAAACAGAGTAGCAGCTCAGACTGCCAGA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGATGGCTTTGGGCAGTaGCTGGATGAAAGCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRDGFGQ*LDESRF Trigger: AAATCTGCTTTCATCCAGCCACTGCCCAAAGCCATC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGTGTCCTCCCAAGAATaGTTTACACCAAGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRVSSQE*FTPSRE Trigger: CTCTCTGCTTGGTGTAAACCATTCTTGGGAGGACAC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGGGGAAAGAGTTCATTaGCAAAAGTGTCCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRGERVH*QKCPPK Trigger: CTTGGGAGGACACTTTTGCCAATGAACTCTTTCCCC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGCTAAGACTAGGGGCTTaGTATATATGTGGTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMLRLGA*YICGQN Trigger: GTTTTGACCACATATATACCAAGCCCCTAGTCTTAG...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATCAACTACAAGGCCATaGGTTTTCTCTCGTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSTTRP*VFSRKS Trigger: GCTTTTACGAGAGAAAACTCATGGCCTTGTAGTTGA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGTCATCTATGAGATCTaGACAAATAGAGGAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWLSVSEGISKTRGLVYMVIYEI*TNRGIL Trigger: GAGAATTCCTCTATTTGTTCAGATCTCATAGATGAC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATCTGGCAGTCTGAGCTaGTACTCTGTTTTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSGSLS*YSVFQF Trigger: AAACTGAAAAACAGAGTAGCAGCTCAGACTGCCAGA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAAGCAGGTGTTCCCGTTaGTTACAGAAGCAAACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSRCSR*LQKQTK Trigger: TTTAGTTTGCTTCTGTAAGCAACGGGAACACCTGCT...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGACTAAGACTAGGGGCTTaGTATATATGTGGTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRLRLGA*YICGQN Trigger: GTTTTGACCACATATATACCAAGCCCCTAGTCTTAG...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATCTATTTTGGCTTTTTaGATGAAGTACAGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSILAF*MKYRQA Trigger: AGCCTGTCTGTACTTCATTCAAAAAGCCAAAATAGA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR TCA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGTCATCTATGAGATCTaGACAAATAGAGGAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSEGISKTRGLVYMWSKRVIYEI*TNRGIL Trigger: GAGAATTCCTCTATTTGTTCAGATCTCATAGATGAC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS GCA 90 bp | CAGAAGCAGAACTTTAGGGGTCCCGTCGGCCGGGTTCGGCGCGGCTaGCACCACCACCATAGCTCCAGACTACGCACCGCGCACCGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QKQNFRGPVGRVRRG*HHHHSSRLRTAHRA Trigger: CGCGCGGTGCGCGGTGCGTAGTCTGGAGCTATGGTGGTGGTGGCAGCCGCGCCGAACCCGGCCGACGGGACCCCTAAAGTTCTGCTTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000482720.1 ENST00000611155.4 |
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| CDS GCA 90 bp | GCCAGAATCCATGGGGAGATGTTCTGGAGGGGTGACAACTGGGCCTaGACCTGCTGCGGACTCAGCAGACCCGGCCACTGGCCTCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARIHGEMFWRGDNWA*TCCGLSRPGHWPHF Trigger: GAAGTGAGGCCAGTGGCCGGGTCTGCTGAGTCCGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGATTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344347.5 ENST00000611155.4 |
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| CDS GCA 90 bp | CATGGGGAGATGTTCTGGAGGGGTGACAACTGGGCCTGCACCTGCTaGAGAGGTGCACGTAGTCTGAGTGCTGCGGACTCAGCAGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: HGEMFWRGDNWACTC*RGARSLSAADSADP Trigger: CGGGTCTGCTGAGTCCGCAGCACTCAGACTACGTGCACCTCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 ENST00000484256.1 |
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| CDS GCA 90 bp | ATCCATGGGGAGATGTTCTGGAGGGGTGACAACTGGGCCTGCACCTaGTGCGGACTCAGCAGACCCGGCCACTGGCCTCACTTCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IHGEMFWRGDNWACT*CGLSRPGHWPHFIP Trigger: GGGAATGAAGTGAGGCCAGTGGCCGGGTCTGCTGAGTCCGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344347.5 ENST00000611155.4 |
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| CDS GCA 90 bp | ATCCATGGGGAGATGTTCTGGAGGGGTGACAACTGGGCCTGCACCTaGTGCAGAGGTGCACGTAGTCTGAGTGCTGCGGACTCAGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IHGEMFWRGDNWACT*CRGARSLSAADSAD Trigger: GTCTGCTGAGTCCGCAGCACTCAGACTACGTGCACCTCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 ENST00000484256.1 |
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| CDS GCA 90 bp | GCCAGAATCCATGGGGAGATGTTCTGGAGGGGTGACAACTGGGCCTaGACCTGCTGCAGAGGTGCACGTAGTCTGAGTGCTGCGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARIHGEMFWRGDNWA*TCCRGARSLSAADS Trigger: TGAGTCCGCAGCACTCAGACTACGTGCACCTCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGATTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 ENST00000484256.1 |
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| CDS-3UTR CAA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGGTGAGGCGCTGTCGCTaGCGCGCCTGGGGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AWLSVSEGISKTRGLVYMVRRCR*RAWGSP Trigger: GGGGCTGCCCCAGGCGCGCAAGCGACAGCGCCTCAC...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS-3UTR CAA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGAGTGAGGCGCTGTCGCTaGCGCGCCTGGGGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSEGISKTRGLVYMWSKRVRRCR*RAWGSP Trigger: GGGGCTGCCCCAGGCGCGCAAGCGACAGCGCCTCAC...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216037.10 ENST00000403532.7 |
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| CDS GCA 90 bp | AACCACCAGTCTGCGGCCACACAGCAAGAGGGCCTGGAAGACAGGTaGCCGCATCCCCAGCTCTGGTCATCTCTAACGAGAGAGTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NHQSAATQQEGLEDR*PHPQLWSSLTRELK Trigger: TTTTAACTCTCTCGTTAGAGATGACCAGAGCTGGGGATGCGGGCACCTGTCTTCCAGGCCCTCTTGCTGTGTGGCCGCAGACTGGTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGCTCACTTCATTCCCCTaGGCTTCCGCCTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWLSVSEGISKTRGLVYMLTSFP*ASASSS Trigger: TGAAGAGGAGGCGGAAGCCAAGGGGAATGAAGTGAG...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTTAATGGCTTCCAGCTaGGCTGATGACGTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: AWLSVSEGISKTRGLVYMLMASS*ADDVPT Trigger: AGTGGGGACGTCATCAGCCAAGCTGGAAGCCATTAA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGACTCACTTCATTCCCCTaGGCTTCCGCCTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSEGISKTRGLVYMWSKRLTSFP*ASASSS Trigger: TGAAGAGGAGGCGGAAGCCAAGGGGAATGAAGTGAG...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATCTGGGGAAGGGCATTaGAAGAACATGACTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSGEGH*KNMTGS Trigger: GGACCCAGTCATGTTCTTCAAATGCCCTTCCCCAGA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGGGAAAGAGTTCATaGGCAAAAGTGTCCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AWLSVSEGISKTRGLVYMWGKSS*AKVSSQ Trigger: TTGGGAGGACACTTTTGCCAATGAACTCTTTCCCCA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATGGGGAAAGAGTTCATaGGCAAAAGTGTCCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSEGISKTRGLVYMWSKRWGKSS*AKVSSQ Trigger: TTGGGAGGACACTTTTGCCAATGAACTCTTTCCCCA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GCTTGGCTCTCTGTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTCTAAGACTAGGGGCTaGGTATATATGTGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AWLSVSEGISKTRGLVYMSKTRG*VYMWSK Trigger: TTTTGACCACATATATACCAAGCCCCTAGTCTTAGA...CATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGATCTAAGACTAGGGGCTaGGTATATATGTGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSEGISKTRGLVYMWSKRSKTRG*VYMWSK Trigger: TTTTGACCACATATATACCAAGCCCCTAGTCTTAGA...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS-3UTR CAA 90 bp | GTCTCAGAGGGTATCTCTAAGACTAGGGGCTTGGTATATATGTGGTCAAAACGACTCTATTTTGGCTTTTaGAATGAAGTACAGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSEGISKTRGLVYMWSKRLYFGF*NEVQTG Trigger: GCCTGTCTGTACTTCATTCAAAAAGCCAAAATAGAG...TCGTTTTGACCACATATATACCAAGCCCCTAGTCTTAGAGATACCCTCTGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 |
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| CDS GCA 90 bp | AAATCTGGTTTGAGTGGCTCTCTTACTTTGGTTCTCCTTAATGATTaGATGGTAATCTTGTTGGCTACTGCATTTGTTAGTACTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KSGLSGSLTLVLLND*MVILLATAFVSTCS Trigger: AGAACAAGTACTAACAAATGCAGTAGCCAACAAGATTACCATGCAATCATTAAGGAGAACCAAAGTAAGAGAGCCACTCAAACCAGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484256.1 |
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| CDS CCA 72 bp | GCCTGCACCTGCTGCGGACTCAGCAGACCCGGCCACTaGCCTCACTTCATTCCCCTTGGCTTCCGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ACTCCGLSRPGH*PHFIPLGFRLL Trigger: GAGGAGGCGGAAGCCAAGGGGAATGAAGTGAGGCCAGTGGCCGGGTCTGCTGAGTCCGCAGCAGGTGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344347.5 ENST00000611155.4 |
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| CDS GCA 72 bp | GAGATGTTCTGGAGGGGTGACAACTGGGCCTGCACCTaGTGCGGACTCAGCAGACCCGGCCACTGGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: EMFWRGDNWACT*CGLSRPGHWPH Trigger: GTGAGGCCAGTGGCCGGGTCTGCTGAGTCCGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344347.5 ENST00000611155.4 |
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| CDS CCA 72 bp | AGAATCCATGGGGAGATGTTCTGGAGGGGTGACAACTaGGCCTGCACCTGCTGCGGACTCAGCAGACCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RIHGEMFWRGDN*ACTCCGLSRPG Trigger: GCCGGGTCTGCTGAGTCCGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGATTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344347.5 ENST00000611155.4 |
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| CDS TCA 72 bp | TACCGCCAGAATCCATGGGGAGATGTTCTGGAGGGGTaGCAACTGGGCCTGCACCTGCTGCGGACTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YRQNPWGDVLEG*QLGLHLLRTQQ Trigger: CTGCTGAGTCCGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGATTCTGGCGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344347.5 ENST00000611155.4 |
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| CDS GCA 72 bp | ATGTTCTGGAGGGGTGACAACTGGGCCTGCACCTGCTaGAGAGGTGCACGTAGTCTGAGTGCTGCGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: MFWRGDNWACTC*RGARSLSAADS Trigger: TGAGTCCGCAGCACTCAGACTACGTGCACCTCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 ENST00000484256.1 |
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| CDS GCA 72 bp | CATGGGGAGATGTTCTGGAGGGGTGACAACTGGGCCTaGACCTGCTGCAGAGGTGCACGTAGTCTGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HGEMFWRGDNWA*TCCRGARSLSA Trigger: AGCACTCAGACTACGTGCACCTCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 ENST00000484256.1 |
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| CDS CCA 72 bp | AGAGTCAATACCGCCAGAATCCATGGGGAGATGTTCTaGAGGGGTGACAACTGGGCCTGCACCTGCTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVNTARIHGEMF*RGDNWACTCCG Trigger: TCCGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGATTCTGGCGGTATTGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344347.5 ENST00000611155.4 |
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| CDS CCA 72 bp | AGAGTCAATACCGCCAGAATCCATGGGGAGATGTTCTaGAGGGGTGACAACTGGGCCTGCACCTGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVNTARIHGEMF*RGDNWACTCCR Trigger: TCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGATTCTGGCGGTATTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216037.10 ENST00000403532.7 ENST00000405219.7 ENST00000484256.1 |
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| CDS TCA 72 bp | CTGTTTTTCAGTTTCCTCATGTCCGAGTTAAGAGGCTaGACCACCAGTCTGCGGCCACACAGCAAGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFFSFLMSELRG*TTSLRPHSKRA Trigger: GGCCCTCTTGCTGTGTGGCCGCAGACTGGTGGTTCAGCCTCTTAACTCGGACATGAGGAAACTGAAAAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS CCA 72 bp | GAGGGCCTGGAAGACAGGTGCCCGCATCCCCAGCTCTaGTCATCTCTAACGAGAGAGTTAAAAAGTACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGLEDRCPHPQL*SSLTRELKSTE Trigger: TTCTGTACTTTTTAACTCTCTCGTTAGAGATGACCAGAGCTGGGGATGCGGGCACCTGTCTTCCAGGCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405219.7 |
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| CDS CAA 72 bp | AGCAAGATAAGATATTTGCCAGTTCTGCTTGAATCTTaGCCTGGAGGAGGAAAAATGTTTCATTGTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SKIRYLPVLLES*PGGGKMFHCAG Trigger: TCCTGCACAATGAAACATTTTTCCTCCTCCAGGCAAAGATTCAAGCAGAACTGGCAAATATCTTATCTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484256.1 |
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| CDS CAA 90 bp | TTACCTTCACAGAGTAAAACTGTGCTACTGTCAATCTTAGACCATTaGATTGTTGTCACTGAATTTGCCATAATCTGTAGACTAAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSQSKTVLLSILDH*IVVTEFAIICRLKL Trigger: GAGTTTTAGTCTACAGATTATGGCAAATTCAGTGACAACAATCAAATGGTCTAAGATTGACAGTAGCACAGTTTTACTCTGTGAAGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484256.1 |
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| CDS CAA 72 bp | CAGAGTAAAACTGTGCTACTGTCAATCTTAGACCATTaGATTGTTGTCACTGAATTTGCCATAATCTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: QSKTVLLSILDH*IVVTEFAIICR Trigger: TCTACAGATTATGGCAAATTCAGTGACAACAATCAAATGGTCTAAGATTGACAGTAGCACAGTTTTACTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484256.1 |
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