RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WWTR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000018408

Ensembl transcript IDs: ENST00000360632.8, ENST00000460517.1, ENST00000465804.5, ENST00000467467.5, ENST00000471586.5, ENST00000472417.1, ENST00000474080.1, ENST00000475579.1, ENST00000479238.1, ENST00000485244.1, ENST00000485352.1, ENST00000494754.1

Found 505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCATCT +
Preference number: 1 (lower is better)
Translates to: LEDSQGNQGNGSVGD*CSWVFVLRFLLYPS
Trigger: AGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR CCA 90 bp TTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTaGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTA +
Preference number: 1 (lower is better)
Translates to: FVPGRQSRKSGKRVC*GLMFMGVCPAFSPV
Trigger: TACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR GCA 90 bp CAACTTGTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTaGAGAGAGCTTTTCAACCAAGTTGGCATCAACCAGCACAATAAA +
Preference number: 1 (lower is better)
Translates to: QLVISNTSVSLDHFF*RELFNQVGINQHNK
Trigger: TTTATTGTGCTGGTTGATGCCAACTTGGTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTACAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR TCA 90 bp ATTCAGAGAAGTAAAAACCAGTACCAAACTCCAGGTAAAATGGTTTaGTCTGATCGATTTGGCTGCATACTTTCGGTACGTATAACATTC +
Preference number: 1 (lower is better)
Translates to: IQRSKNQYQTPGKMV*SDRFGCILSVRITF
Trigger: GAATGTTATACGTACCGAAAGTATGCAGCCAAATCGATCAGATCAAACCATTTTACCTGGAGTTTGGTACTGGTTTTTACTTCTCTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR TCA 90 bp CGGGTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTACTCTGCTCCCTCGAATaGTATGGCCCTCCATTGAGG +
Preference number: 2 (lower is better)
Translates to: RVCWGLMFMGVCPAFSPVLCSLE*YGPPLR
Trigger: CCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAG...TACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR TCA 90 bp GGTCATGGCTACATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGTCATCGTGGGTGGGTTaGCAGCAGCCTGAACTGGGG +
Preference number: 2 (lower is better)
Translates to: GHGYIQVTMVVITARLERSSWVG*QQPELG
Trigger: CCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGA...CCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494754.1
3UTR-3UTR CCA 90 bp CTCACTTTTGTTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCTGGGGTCATCGTGGGTaGGTTGACAGCAGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: LTFVQSRLYIIEEGDQVFWGHRG*VDSSLN
Trigger: GTTCAGGCTGCTGTCAACCCACCCACGATGACCCCA...GAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494754.1
3UTR-3UTR CCA 90 bp ACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGACTCCCTCGAATGATATaGCCCTCCATTGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: TFVPGRQSRKSGKRVCWGLPRMI*PSIEER
Trigger: CCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAG...TCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR CCA 90 bp GCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTTCCTAGTCCTCCGGAGTTGTaGGGACACTGTAGCACCCTA +
Preference number: 2 (lower is better)
Translates to: ADSTSLKRGIRSSDSKVPSPPEL*GHCSTL
Trigger: TAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACT...AGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR CAA 90 bp CCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCATC +
Preference number: 2 (lower is better)
Translates to: PGRQSRKSGKRVCWG*MFMGVCPAFSPVSI
Trigger: GATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR TCA 90 bp CAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTTCTCATCCACATTGCTaGGGAAGTCCTCCGGAGTTG +
Preference number: 2 (lower is better)
Translates to: QSRLYIIEEGDQVFRFQSSHPHC*GSPPEL
Trigger: CAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGA...ACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR GCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGGAGGCGGGAAGTGGTaGACCTGCAGACTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: VISNTSVSLDHFFCRELFGGGKW*TCRLAL
Trigger: CAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR GCA 90 bp GATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCATCTCATCCACATTCCAGGCCACTGTCAGTaGTCTGCTCCCTCGAATGAT +
Preference number: 2 (lower is better)
Translates to: DVHGCLSCVFSCIHLIHIPGHCQ*SAPSND
Trigger: ATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGG...AATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 2 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
3UTR CAA 90 bp GTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTaGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: VCSWKTVKEIRETGL*GIDVHGCLSCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR GCA 90 bp CATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCTCACTTTTGGGGAAGTGGTGCACCTaGAGACTTGCTCTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: HPSYNGSDYSQVRKGSLLGKWCT*RLALLH
Trigger: ATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCC...CAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471586.5
3UTR-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 2 (lower is better)
Translates to: NIKRREHESWRREVVHLQGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
3UTR CAA 90 bp AGAGGGGGATCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTaGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTT +
Preference number: 2 (lower is better)
Translates to: RGGSGLQIPKFLSQR*FLEDSQGNQGNGSV
Trigger: AACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR TCA 90 bp CAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTGATATGGCCCTCCATTaGGGAAAGGATCTGAGCTAT +
Preference number: 2 (lower is better)
Translates to: QSRLYIIEEGDQVFRFQSDMALH*GKDLSY
Trigger: ATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATC...ACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR TCA 90 bp AGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCATCTCATCCACATTGCTaGGGAAGTCCTCCGGAGTTG +
Preference number: 2 (lower is better)
Translates to: RSSDSKVPKSTFVPGRQSSHPHC*GSPPEL
Trigger: CAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGA...TGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR TCA 90 bp TTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTC +
Preference number: 2 (lower is better)
Translates to: FRADSTSLKRGIRSSDSKGSVGD*CSWVFV
Trigger: GACAAACACCCATGAACATCAATCCCCAACAGACCC...TTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR GCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGGGAAGTGGTGCACCTaGAGACTTGCTCTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: VISNTSVSLDHFFCRELFGKWCT*RLALLH
Trigger: ATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR GCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGGCTACGCTCTTGTCTaGCTGTACGCTCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: VISNTSVSLDHFFCRELFGYALV*LYAQHQ
Trigger: CTGATGCTGAGCGTACAGGCAGACAAGAGCGTAGCC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR CCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGTAATCCCAGCACTTTaGGAGGCCGAGATGGGTGGA +
Preference number: 2 (lower is better)
Translates to: VISNTSVSLDHFFCRELFVIPAL*EAEMGG
Trigger: TCCACCCATCTCGGCCTCCCAAAGTGCTGGGATTAC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR CCA 90 bp GGGATCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACTCCCTCGAATGATATaGCCCTCCATTGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: GIRSSDSKVPKSTFVPGRLPRMI*PSIEER
Trigger: CCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAG...TCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR TCA 90 bp GGGATCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGAGATATGGCCCTCCATTaGGGAAAGGATCTGAGCTAT +
Preference number: 2 (lower is better)
Translates to: GIRSSDSKVPKSTFVPGRDMALH*GKDLSY
Trigger: ATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATC...TCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR CAA 90 bp AGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCTCACTTTaGTTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCT +
Preference number: 2 (lower is better)
Translates to: SYNGSDYSQVRKGSL*FRADSTSLKRGIRS
Trigger: AGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR GCA 90 bp AGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCACCTGCAGACTTGCTCTaGTCCATCACTTTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: RSSDSKVPKSTFVPGRQSPADLL*SITFSK
Trigger: CTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGG...TGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471586.5
3UTR-3UTR GCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCCCTGCAGACTTGCTCTaGTCCATCACTTTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: VISNTSVSLDHFFCRELFPADLL*SITFSK
Trigger: CTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGG...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR GCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACGCAATGCAGGCAGACTaGATGCCAGTTGAACATGAT +
Preference number: 2 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNAMQAD*MPVEHD
Trigger: ATCATGTTCAACTGGCATGCAGTCTGCCTGCATTGC...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR TCA 90 bp CTCACTTTTGTTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCATTGAGGAAAGGATCTaGGCTATTATTAGTGATGGA +
Preference number: 2 (lower is better)
Translates to: LTFVQSRLYIIEEGDQVFIEERI*AIISDG
Trigger: TCCATCACTAATAATAGCTCAGATCCTTTCCTCAAT...GAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR CCA 90 bp TGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCATCTCAGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 2 (lower is better)
Translates to: WGLMFMGVCPAFSPVSISGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...TGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR GCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACTCACTGTGTGTGGTGTaGTATCAGGTTGAAATCTAT +
Preference number: 2 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNSLCVV*YQVEIY
Trigger: ATAGATTTCAACCTGATAGCACACCACACACAGTGA...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR CCA 90 bp AAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 2 (lower is better)
Translates to: KFLSQRLFLEDSQGNQGNGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...GTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR GCA 72 bp ATAGTGATGGAGGCAACAGCAGGCTACGCTCTTGTCTaGCTGTACGCTCAGCATCAGCATGCCCTGCCCCTC +
Preference number: 3 (lower is better)
Translates to: IVMEATAGYALV*LYAQHQHALPL
Trigger: GAGGGGCAGGGCATGCTGATGCTGAGCGTACAGGCAGACAAGAGCGTAGCCTGCTGTTGCCTCCATCACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR GCA 72 bp AAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTaGACCTGCAGACTTGCTCTGCTCCATCACTTTTTC +
Preference number: 3 (lower is better)
Translates to: KGGSTSHGGGKW*TCRLALLHHFF
Trigger: GAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
3UTR-3UTR CAA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCAGCAGGCTACGCTCTaGTCTGCCTGTACGCTCAGC +
Preference number: 3 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNQQATL*SACTLS
Trigger: GCTGAGCGTACAGGCAGACAAGAGCGTAGCCTGCTG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR TCA 72 bp AGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: SQGNQGNGSVGD*CSWVFVLRFLL
Trigger: CAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR CCA 72 bp GGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTaGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTT +
Preference number: 3 (lower is better)
Translates to: GRQSRKSGKRVC*GLMFMGVCPAF
Trigger: AAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR CAA 90 bp GATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCATCTCATCCACATTGGTGCACCTGCAGACTaGCTCTGCTCCATCACTTTT +
Preference number: 3 (lower is better)
Translates to: DVHGCLSCVFSCIHLIHIGAPAD*LCSITF
Trigger: AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACC...AATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471586.5
3UTR-3UTR CAA 90 bp GCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTTCCTGATGTTCATGGGTGTTaGTCCTGCGTTTTCTCCTGT +
Preference number: 3 (lower is better)
Translates to: ADSTSLKRGIRSSDSKVPDVHGC*SCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATC...AGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR CAA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACGGTGCACCTGCAGACTaGCTCTGCTCCATCACTTTT +
Preference number: 3 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNGAPAD*LCSITF
Trigger: AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACC...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR CAA 90 bp AGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCACGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGT +
Preference number: 3 (lower is better)
Translates to: RSSDSKVPKSTFVPGRQSRVCWG*MFMGVC
Trigger: ACAAACACCCATGAACATCAATCCCCAACAGACCCG...TGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR TCA 72 bp CCTCGAATGATATGGCCCTCCATTGAGGAAAGGATCTaGGCTATTATTAGTGATGGATCTCATGTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: PRMIWPSIEERI*AIISDGSHVWG
Trigger: ACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATCATTCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494754.1
3UTR TCA 72 bp AGGGCTCACTTTTGTTCAGAGCAGACTCTACATCATTaGAGAGGGGGATCAGGTCTTCAGATTCCAAAGTTC +
Preference number: 3 (lower is better)
Translates to: RAHFCSEQTLHH*RGGSGLQIPKF
Trigger: GAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR CAA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGCTGGAGGGACTAAGTaGTCTAGATGCTCTGCAGTA +
Preference number: 3 (lower is better)
Translates to: VISNTSVSLDHFFCRELFAGGTK*SRCSAV
Trigger: TACTGCAGAGCATCTAGACAACTTAGTCCCTCCAGC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR CAA 90 bp ATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGATGTTCATGGGTGTTaGTCCTGCGTTTTCTCCTGT +
Preference number: 3 (lower is better)
Translates to: IPKFLSQRLFLEDSQGNQDVHGC*SCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATC...CTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR CCA 72 bp TCACTTTTTCCAAGAGGCCCAGGAAATGTAAGGTCATaGCTACATCCAAGTTACAATGGTAGTGATTACAGC +
Preference number: 3 (lower is better)
Translates to: SLFPRGPGNVRS*LHPSYNGSDYS
Trigger: GCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTGGGCCTCTTGGAAAAAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR-3UTR CAA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACGGTGGCAACAGAAAATaGTTGCTTTGTCCTTTTGGG +
Preference number: 3 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNGGNRK*LLCPFG
Trigger: CCCAAAAGGACAAAGCAACAATTTTCTGTTGCCACC...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR GCA 72 bp GCACATTTCCTGGACCAAGATGCCCTCAGAAGTAACTaGCTGTGGTCAGCTTTTTATGGTTTAAAATCAATT +
Preference number: 3 (lower is better)
Translates to: AHFLDQDALRSN*LWSAFYGLKSI
Trigger: AATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGAAATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR CCA 72 bp TTCCTGGACCAAGATGCCCTCAGAAGTAACTGCCTGTaGTCAGCTTTTTATGGTTTAAAATCAATTGGTGTA +
Preference number: 3 (lower is better)
Translates to: FLDQDALRSNCL*SAFYGLKSIGV
Trigger: TACACCAATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR TCA 72 bp AAGCAACAGCTCACTGTGTGTGGTGTGCTATCAGGTTaGAATCTATGTTGTCCTGATGTTTTCAGAGTTATT +
Preference number: 3 (lower is better)
Translates to: KQQLTVCGVLSG*NLCCPDVFRVI
Trigger: AATAACTCTGAAAACATCAGGACAACATAGATTTCAACCTGATAGCACACCACACACAGTGAGCTGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR TCA 72 bp AGTAAAAACCAGTACCAAACTCCAGGTAAAATGGTTTaGTCTGATCGATTTGGCTGCATACTTTCGGTACGT +
Preference number: 3 (lower is better)
Translates to: SKNQYQTPGKMV*SDRFGCILSVR
Trigger: ACGTACCGAAAGTATGCAGCCAAATCGATCAGATCAAACCATTTTACCTGGAGTTTGGTACTGGTTTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR CCA 72 bp AGAGAAGTAAAAACCAGTACCAAACTCCAGGTAAAATaGTTTGATCTGATCGATTTGGCTGCATACTTTCGG +
Preference number: 3 (lower is better)
Translates to: REVKTSTKLQVK*FDLIDLAAYFR
Trigger: CCGAAAGTATGCAGCCAAATCGATCAGATCAAACCATTTTACCTGGAGTTTGGTACTGGTTTTTACTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR-3UTR CAA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCTTGGGGTACTATAACTaGTCTCTTTCCATTTCACAA +
Preference number: 3 (lower is better)
Translates to: VISNTSVSLDHFFCRELFLGYYN*SLSISQ
Trigger: TTGTGAAATGGAAAGAGACAAGTTATAGTACCCCAA...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGGCGGAGGTGCGCGTaGTGCTGCGCGGGGCTACCC +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLWRRCA*CCAGLP
Trigger: GGGTAGCCCCGCGCAGCAGCACGCGCACCTCCGCCA...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCTGGCGGAGGTGCGCGTaGTGCTGCGCGGGGCTACCC +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIWRRCA*CCAGLP
Trigger: GGGTAGCCCCGCGCAGCAGCACGCGCACCTCCGCCA...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGACTGCTGGCGGAGGTaGGCGTGCTGCTGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSDCWRR*ACCCAG
Trigger: CCCCGCGCAGCAGCACGCGCACCTCCGCCAGCAGTC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGACTGCTGGCGGAGGTaGGCGTGCTGCTGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIDCWRR*ACCCAG
Trigger: CCCCGCGCAGCAGCACGCGCACCTCCGCCAGCAGTC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCGCCCGACGAGTCGGTaGTGGACTGGCGCGAGTGCG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSRPTSR*WTGASA
Trigger: CGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCG...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCCGCCCGACGAGTCGGTaGTGGACTGGCGCGAGTGCG +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLRPTSR*WTGASA
Trigger: CGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCG...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCGGAGGTGCGCGTGCTaGTGCGCGGGGCTACCCGCA +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCRRCAC*CAGLPA
Trigger: TGCGGGTAGCCCCGCGCAGCAGCACGCGCACCTCCG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGACGCGGGCGACGAGTaGGAGCGGACATGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSDAGDE*ERTCWA
Trigger: TGCCCAGCATGTCCGCTCGCACTCGTCGCCCGCGTC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTAGTCGAGGCCCCGGGTaGCCGCCCGACGAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLSRGPG*PPDESV
Trigger: CACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACT...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCCCTGCGGGTGGGTTCTaGGTGGGGTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIPAGGF*VGWFCW
Trigger: CCAGCAGAACCACCCCACTCAGAACCCACCCGCAGG...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACGGAGGTGCGCGTGCTaGTGCGCGGGGCTACCCGCA +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQRRCAC*CAGLPA
Trigger: TGCGGGTAGCCCCGCGCAGCAGCACGCGCACCTCCG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGACTGCTGGCGGAGGTaGGCGTGCTGCTGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQDCWRR*ACCCAG
Trigger: CCCCGCGCAGCAGCACGCGCACCTCCGCCAGCAGTC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCCGACGAGTCGGTGCTaGACTGGCGCGAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCPTSRC*TGASAS
Trigger: GCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAAGTCGAGGCCCCGGGTaGCCGCCCGACGAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQSRGPG*PPDESV
Trigger: CACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACT...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGTCGAGGCCCCGGGTaGCCGCCCGACGAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSSRGPG*PPDESV
Trigger: CACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACT...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGAGCCGAGGCTTGGCTaGCAAATCCCGACCCGACTC +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSEPRLG*QIPTRL
Trigger: GAGTCGGGTCGGGATTTGTCAGCCAAGCCTCGGCTC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR TCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGAGCCGAGGCTTGGCTaGCAAATCCCGACCCGACTC +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIEPRLG*QIPTRL
Trigger: GAGTCGGGTCGGGATTTGTCAGCCAAGCCTCGGCTC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR TCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTCCTGGGTCGCTCGGGTaGGTCCCGAGATTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLPGSLG*VPRLRS
Trigger: GCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGG...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR TCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTGCTGCTGCTGCTaGGTGGTCAGCGCATTGGGC +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLCCCCC*VVSALG
Trigger: GCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCA...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACGTCCCGCCCGAACTTaGCGTCGGGCCTGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQRPART*RRAWVA
Trigger: AGCGACCCAGGCCCGACGGCAAGTTCGGGCGGGACG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360632.8
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCACGTGGATCACTTGCTaGCCAGGCGGCGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCTWITC*PGGGSG
Trigger: TCCGCTCCCGCCGCCTGGGCAGCAAGTGATCCACGT...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGACGCGGGCGACGAGTaGGAGCGGACATGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLDAGDE*ERTCWA
Trigger: TGCCCAGCATGTCCGCTCGCACTCGTCGCCCGCGTC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTAGGTGCGCGTGCTGCTaGGCGGGGCTACCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFRCACC*AGLPAA
Trigger: TGCTGCGGGTAGCCCCGCGCAGCAGCACGCGCACCT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGAGGTGCGCGTGCTGCTaGGCGGGGCTACCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQRCACC*AGLPAA
Trigger: TGCTGCGGGTAGCCCCGCGCAGCAGCACGCGCACCT...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACGGAGGTGCGCGTGCTaGTGCGCGGGGCTACCCGCA +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGARRCAC*CAGLPA
Trigger: TGCGGGTAGCCCCGCGCAGCAGCACGCGCACCTCCG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTGGAGCCGAGGCTTaGCTGACAAATCCCGACCCG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSAGAEA*LTNPDP
Trigger: CGGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTACTTGCCGTCGGGCCTaGGTCGCTCGGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLTCRRA*VARVSP
Trigger: GGGACTCACCCGAGCGACCCAGGCCCGACGGCAAGT...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360632.8
CDS-3UTR CCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTCCAGCCCGGGGGCAGTaGCAGCTCGTCGGTCACGTC +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFPARGQ*QLVGHV
Trigger: GACGTGACCGACGAGCTGCCACTGCCCCCGGGCTGG...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACCAGCCCGGGGGCAGTaGCAGCTCGTCGGTCACGTC +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQPARGQ*QLVGHV
Trigger: GACGTGACCGACGAGCTGCCACTGCCCCCGGGCTGG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCATTTGCCGTCGGGCCTaGGTCGCTCGGGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCICRRA*VARVSP
Trigger: GGGACTCACCCGAGCGACCCAGGCCCGACGGCAAAT...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467467.5
CDS-3UTR TCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCCTGGGTCGCTCGGGTaGGTCCCGAGATTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFPGSLG*VPRLRS
Trigger: GCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGG...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR TCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCACTGGTGTGGAACTaGCGGCAGGGTGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSALVWN*RQGGGS
Trigger: TGAACCTCCACCCTGCCGTCAGTTCCACACCAGTGC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTCCTGCGGGTGGGTTCTaGGTGGGGTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLPAGGF*VGWFCW
Trigger: CCAGCAGAACCACCCCACTCAGAACCCACCCGCAGG...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTCATCGTGGGTGGGTTaGCAGCAGCCTGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSSSWVG*QQPELG
Trigger: CCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCGGTGAGTCCCGAGATTaGGGAGCTGGAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCGESRD*GAGAEA
Trigger: AGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACC...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR GCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGTGACGTGGATCACTTaGTGCCCAGGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLVTWIT*CPGGGS
Trigger: GCTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCAC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCTGGACTGGCGCGAGTaGGAGCCCGAATCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLLDWRE*EPESGS
Trigger: GGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAG...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACGCCCGACGAGTCGGTaGTGGACTGGCGCGAGTGCG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGARPTSR*WTGASA
Trigger: CGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGAGTGCGAGCGGACATaGTGGGCACCCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLECERT*WAPPAS
Trigger: ACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCACTC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGACGCGGGCGACGAGTaGGAGCGGACATGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFDAGDE*ERTCWA
Trigger: TGCCCAGCATGTCCGCTCGCACTCGTCGCCCGCGTC...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTCACATCCCCCGAGCTaGCCTAAGGCGCTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSSHPPS*PKALVL
Trigger: CAGCACTAGCGCCTTAGGCCAGCTCGGGGGATGTGA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCCGAGATTGCGGAGCTaGAGCCGAGGCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCPRLRS*SRGLAD
Trigger: GTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACCGACGAGTCGGTGCTaGACTGGCGCGAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQPTSRC*TGASAS
Trigger: GCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGGACCTCTGAGGCACTaGTGTGGAACTGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSGPLRH*CGTDGR
Trigger: CCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCGGACCTCTGAGGCACTaGTGTGGAACTGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLGPLRH*CGTDGR
Trigger: CCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCC...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCGCTGGCTCAGGGTACTaGGGGCCATCTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCAGSGY*GPSAAG
Trigger: ACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGC...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCCCTGCGGGTGGGTTCTaGGTGGGGTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSPAGGF*VGWFCW
Trigger: CCAGCAGAACCACCCCACTCAGAACCCACCCGCAGG...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGGTGAGTCCCGAGATTaGGGAGCTGGAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLGESRD*GAGAEA
Trigger: AGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR GCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTACGTGGATCACTTGCTaGCCAGGCGGCGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFTWITC*PGGGSG
Trigger: TCCGCTCCCGCCGCCTGGGCAGCAAGTGATCCACGT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGTGACGTGGATCACTTaGTGCCCAGGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFVTWIT*CPGGGS
Trigger: GCTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCAC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGTGACGTGGATCACTTaGTGCCCAGGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQVTWIT*CPGGGS
Trigger: GCTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCAC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGCTGGACTGGCGCGAGTaGGAGCCCGAATCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQLDWRE*EPESGS
Trigger: GGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAG...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCACTGGACTGGCGCGAGTaGGAGCCCGAATCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPLDWRE*EPESGS
Trigger: GGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAG...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCGAGTGCGAGCGGACATaGTGGGCACCCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSECERT*WAPPAS
Trigger: ACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCACTC...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCCAGAGGGCAGCTTCCTaGCTCATGAGCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLQRAAS*LMSSSW
Trigger: CCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTG...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCGGAGGCGGGAAGTGGTaGACCTGCAGACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCGGGKW*TCRLAL
Trigger: CAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCAGGTCCTGCGTGACGTaGATCACTTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCRSCVT*ITCCPG
Trigger: GCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCT...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGAGTCGGTGCTGGACTaGCGCGAGTGCGAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFESVLD*RECEPE
Trigger: TTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTC...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCGACGAGTCGGTGCTaGACTGGCGCGAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAPTSRC*TGASAS
Trigger: GCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGCGAGCGGACATGCTaGGCACCCCCAGCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFCERTC*APPASR
Trigger: TCGACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCA...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAATGCGAGCGGACATGCTaGGCACCCCCAGCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQCERTC*APPASR
Trigger: TCGACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCA...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCTGCGAGCGGACATGCTaGGCACCCCCAGCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSCERTC*APPASR
Trigger: TCGACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCA...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGCTGGCTCAGGGTACTaGGGGCCATCTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLAGSGY*GPSAAG
Trigger: ACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGTGGGGTGGTTCTGCTaGCTCAGGGTACTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFVGWFC*LRVLGA
Trigger: GGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCAC...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGTGGGGTGGTTCTGCTaGCTCAGGGTACTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPVGWFC*LRVLGA
Trigger: GGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCAC...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAGTGGGGTGGTTCTGCTaGCTCAGGGTACTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQVGWFC*LRVLGA
Trigger: GGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCAC...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCGCTGCTGCTGCTGAGTaGTCAGCGCATTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLAAAAE*SAHWAY
Trigger: GTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGC...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTGGGGTCATCGTGGGTaGGTTGACAGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSWGHRG*VDSSLN
Trigger: GTTCAGGCTGCTGTCAACCCACCCACGATGACCCCA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGCACTGGTGTGGAACTaGCGGCAGGGTGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLALVWN*RQGGGS
Trigger: TGAACCTCCACCCTGCCGTCAGTTCCACACCAGTGC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCATGCTGCTGCTGCTGCTaGGTGGTCAGCGCATTGGGC +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPCCCCC*VVSALG
Trigger: GCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCA...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCCTCTGCTCCCTCGAATaGTATGGCCCTCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSILCSLE*YGPPLR
Trigger: CCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAG...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCAGAGGGCAGCTTCCTaGCTCATGAGCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCQRAAS*LMSSSW
Trigger: CCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCCAGGCCACTGTCAGTaGTCTGCTCCCTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSPGHCQ*SAPSND
Trigger: ATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGG...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGGGAAGTGGTGCACCTaGAGACTTGCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIGKWCT*RLALLH
Trigger: ATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGGCTACGCTCTTGTCTaGCTGTACGCTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSGYALV*LYAQHQ
Trigger: CTGATGCTGAGCGTACAGGCAGACAAGAGCGTAGCC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGCCGAGATTGCGGAGCTaGAGCCGAGGCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQPRLRS*SRGLAD
Trigger: GTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGG...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGCCGGATTCATCTTCTaGGCGGGCAGCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLAGFIF*AGSEAE
Trigger: CTCAGCTTCGCTGCCCGCCCAGAAGATGAATCCGGC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360632.8
CDS-3UTR CCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGCTGGCTCAGGGTACTaGGGGCCATCTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAAGSGY*GPSAAG
Trigger: ACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGC...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTCGGGTGGGTTCTGAGTaGGGTGGTTCTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLRVGSE*GGSAGS
Trigger: TGAGCCAGCAGAACCACCCCACTCAGAACCCACCCG...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCGAGTCTCAGCTTCCATaGGGAGCTGTCGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCESQLP*GAVDRG
Trigger: CCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTC...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGACAGCAGCCTGAACTaGGGCAAGAGTCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIDSSLN*GKSLSF
Trigger: GAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTAGGGAGCACGAGTCATaGAGGCGGGAAGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLREHES*RREVVH
Trigger: GTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCT...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCCATCTGGATTCTCTaGAGCCGCAGTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLSIWIL*SRSFCC
Trigger: GCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGA...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCATCGTGGGTGGGTTaGCAGCAGCCTGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFSSWVG*QQPELG
Trigger: CCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGA...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTCTGTGTCTAGGTCCTaGGTGACGTGGATCACTTGC +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSSVSRS*VTWITC
Trigger: GCAAGTGATCCACGTCACGCAGGACCTAGACACAGA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGAGGCGGGAAGTGGTaGACCTGCAGACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAGGGKW*TCRLAL
Trigger: CAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAACCCGACTCTGTGCCTaGCAGTCTAAGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPATRLCA*QSKGFG
Trigger: GCCGAAGCCCTTAGACTGCCAGGCACAGAGTCGGGT...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACCCGACTCTGTGCCTaGCAGTCTAAGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQTRLCA*QSKGFG
Trigger: GCCGAAGCCCTTAGACTGCCAGGCACAGAGTCGGGT...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTAGGTCCTGCGTGACGTaGATCACTTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFRSCVT*ITCCPG
Trigger: GCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGGACCTCTGAGGCACTaGTGTGGAACTGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFGPLRH*CGTDGR
Trigger: CCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGCTGGGATACTGCCATaGACCTCTGAGGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLAGILP*TSEALV
Trigger: CACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCCGGGTGGGTTCTGAGTaGGGTGGTTCTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSRVGSE*GGSAGS
Trigger: TGAGCCAGCAGAACCACCCCACTCAGAACCCACCCG...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGCTGCTGCTGCTGAGTaGTCAGCGCATTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLAAAAE*SAHWAY
Trigger: GTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGATGGATCTCATGTCTaGGGTCATCGTGGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIDGSHV*GHRGWV
Trigger: AACCCACCCACGATGACCCCAGACATGAGATCCATC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCATGGAGGCGGGAAGTaGTGCACCTGCAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLHGGGK*CTCRLA
Trigger: AGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATG...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTAGGGAGCACGAGTCATaGAGGCGGGAAGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFREHES*RREVVH
Trigger: GTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
3UTR CAA 72 bp CGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTaGCTCTGCTCCATCACTTTTTCCAAGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVMEAGSGAPAD*LCSITFSKRPR
Trigger: CCTGGGCCTCTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTGTCTAGGTCCTGCGTaGCGTGGATCACTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFCLGPA*RGSLAA
Trigger: GGCAGCAAGTGATCCACGTCACGCAGGACCTAGACA...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCTGCTGCTGGTGTTGGTaGTTCATCACGAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSICCWCW*FITRFG
Trigger: GCCAAATCTCGTGATGAATCACCAACACCAGCAGCA...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCACAGCTTCCTGCCTCATaGGCTCCTCTTGGCGCATTC +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAQLPAS*APLGAF
Trigger: GAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTG...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCCAGCTTCCTGCCTCATaGGCTCCTCTTGGCGCATTC +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSQLPAS*APLGAF
Trigger: GAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTG...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTCAGCTTCCTGCCTCATaGGCTCCTCTTGGCGCATTC +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFQLPAS*APLGAF
Trigger: GAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTG...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGGGTTGACAGCAGCCTaGACTGGGGCAAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPGLTAA*TGARVS
Trigger: TGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCC...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCATCATCGTGGGTGGGTTaGCAGCAGCCTGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGASSWVG*QQPELG
Trigger: CCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGA...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCTGAGGTTTCTCTCTTaGGAGTCGCCAGGATGTGAG +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCLRFLS*ESPGCE
Trigger: CTCACATCCTGGCGACTCTCAAGAGAGAAACCTCAG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR GCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCACATACTCATGAGCCCTaGGGGTGGGTTCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAHTHEP*GWVLSG
Trigger: CCCACTCAGAACCCACCCGCAGGGCTCATGAGTATG...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACAGAGGGCAGCTTCCTaGCTCATGAGCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQQRAAS*LMSSSW
Trigger: CCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGGGAAGTGGTGCACCTaGAGACTTGCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLGKWCT*RLALLH
Trigger: ATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGGGAAGTGGTGCACCTaGAGACTTGCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLGKWCT*RLALLH
Trigger: ATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCCCGAGATTGTGCCATTaGATTCCAGCCTGGACAACA +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLPRLCH*IPAWTT
Trigger: TGTTGTCCAGGCTGGAATGCAATGGCACAATCTCGG...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTGCAGGCAGACTGCATaGCAGTTGAACATGATGCTC +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSCRQTA*QLNMML
Trigger: GAGCATCATGTTCAACTGGCATGCAGTCTGCCTGCA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCATCACATCCCCCGAGCTaGCCTAAGGCGCTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGASHPPS*PKALVL
Trigger: CAGCACTAGCGCCTTAGGCCAGCTCGGGGGATGTGA...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAAGGTCCTGCGTGACGTaGATCACTTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGARSCVT*ITCCPG
Trigger: GCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCT...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGTTGAGGAAGTACCTCTaGCCAGTGGCCGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLLRKYL*PVAVKV
Trigger: GACCTTCACGGCCACTGGCCAGAGGTACTTCCTCAA...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGCTGGGATACTGCCATaGACCTCTGAGGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAAGILP*TSEALV
Trigger: CACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGC...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGCTGGGATACTGCCATaGACCTCTGAGGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFAGILP*TSEALV
Trigger: CACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGCTGCTGCTGCTGAGTaGTCAGCGCATTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQAAAAE*SAHWAY
Trigger: GTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAATGGGGTCATCGTGGGTaGGTTGACAGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQWGHRG*VDSSLN
Trigger: GTTCAGGCTGCTGTCAACCCACCCACGATGACCCCA...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000471586.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCTCCCTCGAATGATATaGCCCTCCATTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSLPRMI*PSIEER
Trigger: CCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAG...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTAGTCCTCCGGAGTTGTaGGGACACTGTAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLSPPEL*GHCSTL
Trigger: TAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACT...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGGGAAACGGGTCTGTTaGGGATTGATGTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSGKRVC*GLMFMG
Trigger: ACCCATGAACATCAATCCCCAACAGACCCGTTTCCC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCCATGGAGGCGGGAAGTaGTGCACCTGCAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSHGGGK*CTCRLA
Trigger: AGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATG...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACATTGGGCATACTCATaGGCCCTGCGGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAHWAYS*ALRVGS
Trigger: AGAACCCACCCGCAGGGCTCATGAGTATGCCCAATG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGTCCATCTGGATTCTCTaGAGCCGCAGTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLSIWIL*SRSFCC
Trigger: GCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGA...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAGGGTTGACAGCAGCCTaGACTGGGGCAAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAGLTAA*TGARVS
Trigger: TGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCC...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACTCTGCTCCCTCGAATaGTATGGCCCTCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQLCSLE*YGPPLR
Trigger: CCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000471586.5
CDS-3UTR TCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGTCTCATCCACATTGCTaGGGAAGTCCTCCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLSHPHC*GSPPEL
Trigger: CAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGA...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCAGACTCTACATCATTaGAGAGGGGGATCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSQTLHH*RGGSGL
Trigger: AAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTG...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCGTCCCCCATGGAAATTaGAAGTATCCTCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLVPHGN*KYPLRD
Trigger: GTCTCTGAGAGGATACTTTCAATTTCCATGGGGGAC...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACATACTCATGAGCCCTaGGGGTGGGTTCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAHTHEP*GWVLSG
Trigger: CCCACTCAGAACCCACCCGCAGGGCTCATGAGTATG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCCAGGCCACTGTCAGTaGTCTGCTCCCTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFPGHCQ*SAPSND
Trigger: ATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGG...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCCCTGCAGACTTGCTCTaGTCCATCACTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIPADLL*SITFSK
Trigger: CTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGG...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTGCAGGCAGACTGCATaGCAGTTGAACATGATGCTC +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCCRQTA*QLNMML
Trigger: GAGCATCATGTTCAACTGGCATGCAGTCTGCCTGCA...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGCAATGCAGGCAGACTaGATGCCAGTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIAMQAD*MPVEHD
Trigger: ATCATGTTCAACTGGCATGCAGTCTGCCTGCATTGC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGGCTACGCTCTTGTCTaGCTGTACGCTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQGYALV*LYAQHQ
Trigger: CTGATGCTGAGCGTACAGGCAGACAAGAGCGTAGCC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAATTGAGGAAGTACCTCTaGCCAGTGGCCGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQLRKYL*PVAVKV
Trigger: GACCTTCACGGCCACTGGCCAGAGGTACTTCCTCAA...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCTTGAGGAAGTACCTCTaGCCAGTGGCCGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSLRKYL*PVAVKV
Trigger: GACCTTCACGGCCACTGGCCAGAGGTACTTCCTCAA...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCCTCATGAGCTCCTCTTaGCGCATTCGAATCCTTTCT +
Preference number: 4 (lower is better)
Translates to: ARVMEAGSGAPADLLCSILMSSS*RIRILS
Trigger: AGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAG...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAGAGTCTCAGCTTCCATaGGGAGCTGTCGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAESQLP*GAVDRG
Trigger: CCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTC...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGACAGCAGCCTGAACTaGGGCAAGAGTCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPDSSLN*GKSLSF
Trigger: GAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTC...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGACAGCAGCCTGAACTaGGGCAAGAGTCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFDSSLN*GKSLSF
Trigger: GAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCATGGGGTCATCGTGGGTaGGTTGACAGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAWGHRG*VDSSLN
Trigger: GTTCAGGCTGCTGTCAACCCACCCACGATGACCCCA...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGATGGATCTCATGTCTaGGGTCATCGTGGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLDGSHV*GHRGWV
Trigger: AACCCACCCACGATGACCCCAGACATGAGATCCATC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp CCCCAGGCCACTGTCAGTGCTCTGCTCCCTCGAATGATATGGCCCTCCATTGAGCTCCCTCGAATGATATaGCCCTCCATTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PQATVSALLPRMIWPSIELPRMI*PSIEER
Trigger: CCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAG...CTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGTCCTCCGGAGTTGTaGGGACACTGTAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSSPPEL*GHCSTL
Trigger: TAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACT...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAAGTCCTCCGGAGTTGTaGGGACACTGTAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPASPPEL*GHCSTL
Trigger: TAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACT...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AGCACCCTAACCCCAGGCCACTGTCAGTGCTCTGCTCCCTCGAATGATATGGCCGGGAAACGGGTCTGTTaGGGATTGATGTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: STLTPGHCQCSAPSNDMAGKRVC*GLMFMG
Trigger: ACCCATGAACATCAATCCCCAACAGACCCGTTTCCC...GGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAATCCATCTGGATTCTCTaGAGCCGCAGTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQSIWIL*SRSFCC
Trigger: GCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGA...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACTCTGCTCCCTCGAATaGTATGGCCCTCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGALCSLE*YGPPLR
Trigger: CCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCTCTCATCCACATTGCTaGGGAAGTCCTCCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSSHPHC*GSPPEL
Trigger: CAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGA...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCGTCCCCCATGGAAATTaGAAGTATCCTCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCVPHGN*KYPLRD
Trigger: GTCTCTGAGAGGATACTTTCAATTTCCATGGGGGAC...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTAGAGTCGCCAGGATGTaGGCTGAAATGAGTCAATAT +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSRVARM*AEMSQY
Trigger: ATATTGACTCATTTCAGCTCACATCCTGGCGACTCT...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR GCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCTGTGTCTAGGTCCTaGGTGACGTGGATCACTTGC +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFSVSRS*VTWITC
Trigger: GCAAGTGATCCACGTCACGCAGGACCTAGACACAGA...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCTCTGTGTCTAGGTCCTaGGTGACGTGGATCACTTGC +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSSVSRS*VTWITC
Trigger: GCAAGTGATCCACGTCACGCAGGACCTAGACACAGA...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTATTTGGCTGGGATACTaGCATGGACCTCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFIWLGY*HGPLRH
Trigger: GTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAAAT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCATTTGGCTGGGATACTaGCATGGACCTCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSIWLGY*HGPLRH
Trigger: GTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAAAT...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCCTGCAGACTTGCTCTaGTCCATCACTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCPADLL*SITFSK
Trigger: CTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp CCCCAGGCCACTGTCAGTGCTCTGCTCCCTCGAATGATATGGCCCTCCATTGAGCCTGCAGACTTGCTCTaGTCCATCACTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PQATVSALLPRMIWPSIEPADLL*SITFSK
Trigger: CTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGG...CTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471586.5
CDS-3UTR GCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGGACTTCATTGGCAATaGAGGCAGACTGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQGLHWQ*RQTACQ
Trigger: CTGGCATGCAGTCTGCCTGCATTGCCAATGAAGTCC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCGGACTTCATTGGCAATaGAGGCAGACTGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSGLHWQ*RQTACQ
Trigger: CTGGCATGCAGTCTGCCTGCATTGCCAATGAAGTCC...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTCCTCCCACATAAGGTaGACCAAAGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSSSHIR*TKAFFS
Trigger: AGAAAAGAAGGCTTTGGTGCACCTTATGTGGGAGGA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCCACCAGGAAGCAGATaGCAAGATAAGAGTCAGATG +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCPPGSR*QDKSQM
Trigger: CATCTGACTCTTATCTTGGCATCTGCTTCCTGGTGG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR CCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCTCATGAGCTCCTCTTaGCGCATTCGAATCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCLMSSS*RIRILS
Trigger: AGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTCTCCCTCGAATGATATaGCCCTCCATTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLLPRMI*PSIEER
Trigger: CCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAG...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCATGCTGCTGGTGTTGGTaGTTCATCACGAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPCCWCW*FITRFG
Trigger: GCCAAATCTCGTGATGAATCACCAACACCAGCAGCA...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCATCTCATCCACATTGCTaGGGAAGTCCTCCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGASHPHC*GSPPEL
Trigger: CAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGA...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQGSVGD*CSWVFV
Trigger: GACAAACACCCATGAACATCAATCCCCAACAGACCC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPGSVGD*CSWVFV
Trigger: GACAAACACCCATGAACATCAATCCCCAACAGACCC...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFGSVGD*CSWVFV
Trigger: GACAAACACCCATGAACATCAATCCCCAACAGACCC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAATTTGGCTGGGATACTaGCATGGACCTCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAIWLGY*HGPLRH
Trigger: GTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAAAT...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGTGCACCTGCAGACTTaGTCTGCTCCATCACTTTTT +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLVHLQT*SAPSLF
Trigger: AAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCAC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCGCCCTCAGAAGTAACTaGCTGTGGTCAGCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCALRSN*LWSAFY
Trigger: ATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGC...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCAGGTCGAATTTTGTaGACATTTCCTGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLSGRIL*TFPGPR
Trigger: TCTTGGTCCAGGAAATGTGCACAAAATTCGACCTGA...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACCGAGATTGTGCCATTaGATTCCAGCCTGGACAACA +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQPRLCH*IPAWTT
Trigger: TGTTGTCCAGGCTGGAATGCAATGGCACAATCTCGG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCCAGCCCGGGGGCAGTaGCAGCTCGTCGGTCACGTC +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNPARGQ*QLVGHV
Trigger: GACGTGACCGACGAGCTGCCACTGCCCCCGGGCTGG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAATCACGAGATTTGGCTaGGATACTGCCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAITRFG*DTAMDL
Trigger: GAGGTCCATGGCAGTATCCCAGCCAAATCTCGTGAT...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGATCACGAGATTTGGCTaGGATACTGCCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQITRFG*DTAMDL
Trigger: GAGGTCCATGGCAGTATCCCAGCCAAATCTCGTGAT...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCATCACGAGATTTGGCTaGGATACTGCCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSITRFG*DTAMDL
Trigger: GAGGTCCATGGCAGTATCCCAGCCAAATCTCGTGAT...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GGGAAACGGGTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTGAGTCTCAGCTTCCATaGGGAGCTGTCGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GKRVCWGLMFMGVCPAFSESQLP*GAVDRG
Trigger: CCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTC...AGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGGGAAACGGGTCTGTTaGGGATTGATGTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPGKRVC*GLMFMG
Trigger: ACCCATGAACATCAATCCCCAACAGACCCGTTTCCC...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCGTCAACGTTTGTTCCTaGAAGACAGTCAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLVNVCS*KTVKEI
Trigger: GATTTCCTTGACTGTCTTCCAGGAACAAACGTTGAC...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCGCCGGATTCATCTTCTaGAAAATCACTAGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLAGFIF*KITSKR
Trigger: ACGCTTACTAGTGATTTTCCAGAAGATGAATCCGGC...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR TCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGATATGGCCCTCCATTaGGGAAAGGATCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFDMALH*GKDLSY
Trigger: ATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGATATGGCCCTCCATTaGGGAAAGGATCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPADMALH*GKDLSY
Trigger: ATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATC...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACAGACTCTACATCATTaGAGAGGGGGATCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQQTLHH*RGGSGL
Trigger: AAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000471586.5
CDS-3UTR TCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCAGACTCTACATCATTaGAGAGGGGGATCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFQTLHH*RGGSGL
Trigger: AAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTG...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTCTGAGATCAGGAGTTTaGGAACAGCCTGACCATTAT +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLLRSGV*EQPDHY
Trigger: ATAATGGTCAGGCTGTTCTCAAACTCCTGATCTCAG...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCGGTGTGCTATCAGGTTaGAATCTATGTTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCGVLSG*NLCCPD
Trigger: ATCAGGACAACATAGATTTCAACCTGATAGCACACC...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCACCTGCAGACTTGCTCTaGTCCATCACTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAPADLL*SITFSK
Trigger: CTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGG...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGTGCACCTGCAGACTTaGTCTGCTCCATCACTTTTT +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPVHLQT*SAPSLF
Trigger: AAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCAC...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGTGCACCTGCAGACTTaGTCTGCTCCATCACTTTTT +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFVHLQT*SAPSLF
Trigger: AAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCAC...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTCACTGTGTGTGGTGTaGTATCAGGTTGAAATCTAT +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSSLCVV*YQVEIY
Trigger: ATAGATTTCAACCTGATAGCACACCACACACAGTGA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAGCAATGCAGGCAGACTaGATGCCAGTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQAMQAD*MPVEHD
Trigger: ATCATGTTCAACTGGCATGCAGTCTGCCTGCATTGC...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp GTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCGAGTCTCAGCTTCCATaGGGAGCTGTCGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: VCWGLMFMGVCPAFSPVSESQLP*GAVDRG
Trigger: CCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTC...GGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACTCCCTCGAATGATATaGCCCTCCATTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGALPRMI*PSIEER
Trigger: CCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp CGGGTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTAAGTCCTCCGGAGTTGTaGGGACACTGTAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: RVCWGLMFMGVCPAFSPVSPPEL*GHCSTL
Trigger: TAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACT...TACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGTTTGTGCACATTTCCTaGACCAAGATGCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLFVHIS*TKMPSE
Trigger: TTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAAA...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGTGTTTGGGAGTCTCTaGTGTTGTAGAGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQVFGSL*CCRGVC
Trigger: ACACACTCCTCTACAACACCAGAGACTCCCAAACAC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR TCA 90 bp CAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTGGGTTGACAGCAGCCTaGACTGGGGCAAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QSRLYIIEEGDQVFRFQSGLTAA*TGARVS
Trigger: TGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCC...ACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp TGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTGATGTTCATGGGTTGACAGCAGCCTaGACTGGGGCAAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: WKTVKEIRETGLLGIDVHGLTAA*TGARVS
Trigger: TGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCC...ATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp TTTGTTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCTCATCGTGGGTGGGTTaGCAGCAGCCTGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: FVQSRLYIIEEGDQVFRFSSWVG*QQPELG
Trigger: CCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGA...GAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCATTGAGGAAAGGATCTaGGCTATTATTAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: KEGARVMEAGSGAPADLLIEERI*AIISDG
Trigger: TCCATCACTAATAATAGCTCAGATCCTTTCCTCAAT...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp CCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTGATGTTCTCTCATCCACATTGCTaGGGAAGTCCTCCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PGRQSRKSGKRVCWGLMFSHPHC*GSPPEL
Trigger: CAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGA...GAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACTGAGATCAGGAGTTTaGGAACAGCCTGACCATTAT +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQLRSGV*EQPDHY
Trigger: ATAATGGTCAGGCTGTTCTCAAACTCCTGATCTCAG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCACCAGGTAAAATGGTTTaGTCTGATCGATTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAPGKMV*SDRFGC
Trigger: GCAGCCAAATCGATCAGATCAAACCATTTTACCTGG...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGAAGATAAGAGTCAGATaGGCAGAGATGTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLKIRVR*AEMYWG
Trigger: TCCCCAATACATCTCTGCTCATCTGACTCTTATCTT...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR GCA 90 bp TCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTGATGTTCCAGGCCACTGTCAGTaGTCTGCTCCCTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: SWKTVKEIRETGLLGIDVPGHCQ*SAPSND
Trigger: ATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGG...AACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR GCA 90 bp AAGAGGGGGATCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAGGCGGGAAGTGGTaGACCTGCAGACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KRGIRSSDSKVPKSTFVPGGGKW*TCRLAL
Trigger: CAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC...AGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471586.5
CDS-3UTR GCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGCCCTCAGAAGTAACTaGCTGTGGTCAGCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFALRSN*LWSAFY
Trigger: ATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGC...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCATCCTCCCACATAAGGTaGACCAAAGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPASSHIR*TKAFFS
Trigger: AGAAAAGAAGGCTTTGGTGCACCTTATGTGGGAGGA...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCCTTATCAAGAATTCTaGAGGGGTTTTAACACTTAC +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSPYQEF*RGFNTY
Trigger: GTAAGTGTTAAAACCCCTGCAGAATTCTTGATAAGG...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGATCGATTTGGCTaGATACTTTCGGTACGTATA +
Preference number: 4 (lower is better)
Translates to: KRREHESWRREVVHLQTCSDRFG*ILSVRI
Trigger: TATACGTACCGAAAGTATGCAGCCAAATCGATCAGA...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACGAGTCGGTGCTGGACTaGCGCGAGTGCGAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNESVLD*RECEPE
Trigger: TTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTC...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGTCAACGTTTGTTCCTaGAAGACAGTCAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLVNVCS*KTVKEI
Trigger: GATTTCCTTGACTGTCTTCCAGGAACAAACGTTGAC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACAGCTCACTGTGTGTaGTGTGCTATCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPTAHCV*CAIRLK
Trigger: TTTCAACCTGATAGCACACCACACACAGTGAGCTGT...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAACAGCTCACTGTGTGTaGTGTGCTATCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPATAHCV*CAIRLK
Trigger: TTTCAACCTGATAGCACACCACACACAGTGAGCTGT...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTTATGTGTTAGGAAAATaGTCTCTGTCAATTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RREHESWRREVVHLQTCSYVLGK*SLSIAH
Trigger: ATGGGCAATTGACAGAGACCATTTTCCTAACACATA...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp TCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGTCATCGTGGGTGGGTTaGCAGCAGCCTGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: SSDSKVPKSTFVPGRQSRSSWVG*QQPELG
Trigger: CCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGA...CCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp GTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCTCTCATCCACATTGCTaGGGAAGTCCTCCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VCWGLMFMGVCPAFSPVSSHPHC*GSPPEL
Trigger: CAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGA...GGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAGGTGTGCTATCAGGTTaGAATCTATGTTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPGVLSG*NLCCPD
Trigger: ATCAGGACAACATAGATTTCAACCTGATAGCACACC...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGCCTTCTTTCCAACATaGTCCAATGTACTCTGTACA +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFAFFPT*SNVLCT
Trigger: TGTACAGAGTACATTGGATCATGTTGGAAAGAAGGC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGGATGTGAGCTGAAATaGGTCAATATAAGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFGCELK*VNIRPC
Trigger: ACAAGGCCTTATATTGACTCATTTCAGCTCACATCC...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR TCA 90 bp CTTTTGTTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATAGAGGGCAGCTTCTATaGTGCAGCACAACGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLFRADSTSLKRGIRSSDRGQLL*CSTTPH
Trigger: GTGGGGCGTTGTGCTGCATCATAGAAGCTGCCCTCT...ATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494754.1
CDS-3UTR GCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCAGGTCGAATTTTGTaGACATTTCCTGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFSGRIL*TFPGPR
Trigger: TCTTGGTCCAGGAAATGTGCACAAAATTCGACCTGA...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGTCACTGTGTGTGGTGTaGTATCAGGTTGAAATCTAT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLSLCVV*YQVEIY
Trigger: ATAGATTTCAACCTGATAGCACACCACACACAGTGA...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGTCAGTCAGAGATCTaGTTCATCCTTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLCQSEI*FILQFH
Trigger: ATGAAACTGAAGGATGAAGCAGATCTCTGACTGACA...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp CGGGTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTAGGGAAACGGGTCTGTTaGGGATTGATGTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: RVCWGLMFMGVCPAFSPVGKRVC*GLMFMG
Trigger: ACCCATGAACATCAATCCCCAACAGACCCGTTTCCC...TACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAGTCAACGTTTGTTCCTaGAAGACAGTCAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQVNVCS*KTVKEI
Trigger: GATTTCCTTGACTGTCTTCCAGGAACAAACGTTGAC...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000471586.5
CDS-3UTR TCA 90 bp ACGGGTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTGATATGGCCCTCCATTaGGGAAAGGATCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: TGLLGIDVHGCLSCVFSCDMALH*GKDLSY
Trigger: ATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATC...ACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAGCCTTCTTTCCAACATaGTCCAATGTACTCTGTACA +
Preference number: 4 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAAFFPT*SNVLCT
Trigger: TGTACAGAGTACATTGGATCATGTTGGAAAGAAGGC...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp TTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCATCTCATCCACAGGGAAGTGGTGCACCTaGAGACTTGCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LMFMGVCPAFSPVSISSTGKWCT*RLALLH
Trigger: ATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCC...TGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471586.5
CDS-3UTR GCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGTGTCAGTCAGAGATCTaGTTCATCCTTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQCQSEI*FILQFH
Trigger: ATGAAACTGAAGGATGAAGCAGATCTCTGACTGACA...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAATCTGATCGATTTGGCTaGATACTTTCGGTACGTATA +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQSDRFG*ILSVRI
Trigger: TATACGTACCGAAAGTATGCAGCCAAATCGATCAGA...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCCGGGTGGGTTCTGAGTaGGGTGGTTCTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VISNTSVSLDHFFCRELFRVGSE*GGSAGS
Trigger: TGAGCCAGCAGAACCACCCCACTCAGAACCCACCCG...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AAGAGGGGGATCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGACAGCAGCCTGAACTaGGGCAAGAGTCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KRGIRSSDSKVPKSTFVPDSSLN*GKSLSF
Trigger: GAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTC...AGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp CTACATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCTCACTTTGGGGTCATCGTGGGTaGGTTGACAGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LHPSYNGSDYSQVRKGSLWGHRG*VDSSLN
Trigger: GTTCAGGCTGCTGTCAACCCACCCACGATGACCCCA...AAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 4 (lower is better)
Translates to: GNIKRREHESWRREVVHLGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAGGGAGCACGAGTCATaGAGGCGGGAAGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VISNTSVSLDHFFCRELFREHES*RREVVH
Trigger: GTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCT...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR CAA 72 bp CAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QSRKSGKRVCWG*MFMGVCPAFSP
Trigger: AGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR CAA 72 bp TGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTaGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: WKTVKEIRETGL*GIDVHGCLSCV
Trigger: AACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCATTGGGCATACTCATaGGCCCTGCGGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNHWAYS*ALRVGS
Trigger: AGAACCCACCCGCAGGGCTCATGAGTATGCCCAATG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTATTGAGGAAAGGATCTaGGCTATTATTAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFIEERI*AIISDG
Trigger: TCCATCACTAATAATAGCTCAGATCCTTTCCTCAAT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAATTGAGGAAAGGATCTaGGCTATTATTAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPIEERI*AIISDG
Trigger: TCCATCACTAATAATAGCTCAGATCCTTTCCTCAAT...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR TCA 90 bp CAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QSRLYIIEEGDQVFRFQSGSVGD*CSWVFV
Trigger: GACAAACACCCATGAACATCAATCCCCAACAGACCC...ACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCATCTTCTAGTATTTTCTaGTGCCACAAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: QHKKEGARVMEAGSGAPASSSIF*CHKLTR
Trigger: TCTAGTAAGCTTGTGGCATCAGAAAATACTAGAAGA...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCTTCTAGTATTTTCTaGTGCCACAAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFSSSIF*CHKLTR
Trigger: TCTAGTAAGCTTGTGGCATCAGAAAATACTAGAAGA...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCATACTCATGAGCCCTaGGGGTGGGTTCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNHTHEP*GWVLSG
Trigger: CCCACTCAGAACCCACCCGCAGGGCTCATGAGTATG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp CTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGACCAGGCCACTGTCAGTaGTCTGCTCCCTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: LQIPKFLSQRLFLEDSQGPGHCQ*SAPSND
Trigger: ATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGG...TCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR GCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCCCTTATCAAGAATTCTaGAGGGGTTTTAACACTTAC +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSPYQEF*RGFNTY
Trigger: GTAAGTGTTAAAACCCCTGCAGAATTCTTGATAAGG...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTATGGTCTCTGTCAATTaGCCATTTTCCCAATTAAAT +
Preference number: 4 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLMVSVN*PFSQLN
Trigger: ATTTAATTGGGAAAATGGGCAATTGACAGAGACCAT...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACGAGTCTCAGCTTCCATaGGGAGCTGTCGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNESQLP*GAVDRG
Trigger: CCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTC...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp ATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGTGGGGTCATCGTGGGTaGGTTGACAGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: IPKFLSQRLFLEDSQGNQWGHRG*VDSSLN
Trigger: GTTCAGGCTGCTGTCAACCCACCCACGATGACCCCA...CTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp TCATGGCTACATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCGATGGATCTCATGTCTaGGGTCATCGTGGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SWLHPSYNGSDYSQVRKGDGSHV*GHRGWV
Trigger: AACCCACCCACGATGACCCCAGACATGAGATCCATC...GCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCATCTCATCCACATTGATGGATCTCATGTCTaGGGTCATCGTGGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: DVHGCLSCVFSCIHLIHIDGSHV*GHRGWV
Trigger: AACCCACCCACGATGACCCCAGACATGAGATCCATC...AATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp AGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGTCCTCCGGAGTTGTaGGGACACTGTAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: RSSDSKVPKSTFVPGRQSSPPEL*GHCSTL
Trigger: TAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACT...TGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 4 (lower is better)
Translates to: VMEAGSGAPADLLCSITFGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCCATGGAGGCGGGAAGTaGTGCACCTGCAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: VISNTSVSLDHFFCRELFHGGGK*CTCRLA
Trigger: AGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATG...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTAGAAGTAACTGCCTGTaGTCAGCTTTTTATGGTTTA +
Preference number: 4 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFRSNCL*SAFYGL
Trigger: TAAACCATAAAAAGCTGACCACAGGCAGTTACTTCT...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGCAAATAAGTCCCCCATaGAAATTGAAAGTATCCTCT +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQQISPP*KLKVSS
Trigger: AGAGGATACTTTCAATTTCCATGGGGGACTTATTTG...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGTATGTGTTAGGAAAATaGTCTCTGTCAATTGCCCAT +
Preference number: 4 (lower is better)
Translates to: NIKRREHESWRREVVHLQYVLGK*SLSIAH
Trigger: ATGGGCAATTGACAGAGACCATTTTCCTAACACATA...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp GATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCACTCTGCTCCCTCGAATaGTATGGCCCTCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: DSKVPKSTFVPGRQSRKSLCSLE*YGPPLR
Trigger: CCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAG...TGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp GCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTTCCTCAGACTCTACATCATTaGAGAGGGGGATCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ADSTSLKRGIRSSDSKVPQTLHH*RGGSGL
Trigger: AAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTG...AGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR GCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCCAGGCCACTGTCAGTaGTCTGCTCCCTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNPGHCQ*SAPSND
Trigger: ATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp AAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAAGACAGCAGCCTGAACTaGGGCAAGAGTCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVPKSTFVPGRQSRKSGKDSSLN*GKSLSF
Trigger: GAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTC...TTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp CCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTGATGTTCGTCAACGTTTGTTCCTaGAAGACAGTCAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: PGRQSRKSGKRVCWGLMFVNVCS*KTVKEI
Trigger: GATTTCCTTGACTGTCTTCCAGGAACAAACGTTGAC...GAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAAAACTCCAGGTAAAATaGTTTGATCTGATCGATTTG +
Preference number: 4 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQKLQVK*FDLIDL
Trigger: CAAATCGATCAGATCAAACCATTTTACCTGGAGTTT...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAACTCCAGGTAAAATaGTTTGATCTGATCGATTTG +
Preference number: 4 (lower is better)
Translates to: MEAGSGAPADLLCSITFSKLQVK*FDLIDL
Trigger: CAAATCGATCAGATCAAACCATTTTACCTGGAGTTT...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp ATCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGGGGTCTGTTGGGGATTaGTGTTCATGGGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: IRSSDSKVPKSTFVPGRQGSVGD*CSWVFV
Trigger: GACAAACACCCATGAACATCAATCCCCAACAGACCC...CTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR GCA 90 bp TTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTGCACCTGCAGACTTaGTCTGCTCCATCACTTTTT +
Preference number: 4 (lower is better)
Translates to: FRADSTSLKRGIRSSDSKVHLQT*SAPSLF
Trigger: AAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCAC...TTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471586.5
CDS-3UTR CCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGATGGATCTCATGTCTaGGGTCATCGTGGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VISNTSVSLDHFFCRELFDGSHV*GHRGWV
Trigger: AACCCACCCACGATGACCCCAGACATGAGATCCATC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp CTACATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCTCACTTGATATGGCCCTCCATTaGGGAAAGGATCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LHPSYNGSDYSQVRKGSLDMALH*GKDLSY
Trigger: ATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATC...AAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCACTCCCTCGAATGATATaGCCCTCCATTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: DSKVPKSTFVPGRQSRKSLPRMI*PSIEER
Trigger: CCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAG...TGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGGGAAACGGGTCTGTTaGGGATTGATGTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: VISNTSVSLDHFFCRELFGKRVC*GLMFMG
Trigger: ACCCATGAACATCAATCCCCAACAGACCCGTTTCCC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
3UTR CAA 72 bp AAGGGCTCACTTTTGTTCAGAGCAGACTCTACATCATaGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KGSLLFRADSTS*KRGIRSSDSKV
Trigger: AACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp GATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCACAGACTCTACATCATTaGAGAGGGGGATCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DSKVPKSTFVPGRQSRKSQTLHH*RGGSGL
Trigger: AAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTG...TGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp GGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTGATGTTCATGGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 4 (lower is better)
Translates to: GRQSRKSGKRVCWGLMFMGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...CATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
3UTR CAA 72 bp TCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTaGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SGLQIPKFLSQR*FLEDSQGNQGN
Trigger: GTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCCAGGTAAAATGGTTTaGTCTGATCGATTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNPGKMV*SDRFGC
Trigger: GCAGCCAAATCGATCAGATCAAACCATTTTACCTGG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp CATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCTCACTTTTGGTCAACGTTTGTTCCTaGAAGACAGTCAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: HPSYNGSDYSQVRKGSLLVNVCS*KTVKEI
Trigger: GATTTCCTTGACTGTCTTCCAGGAACAAACGTTGAC...CAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACTTTGTGCACATTTCCTaGACCAAGATGCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNFVHIS*TKMPSE
Trigger: TTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAAA...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR TCA 90 bp AGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAATTGAGGAAAGGATCTaGGCTATTATTAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: RSSDSKVPKSTFVPGRQSIEERI*AIISDG
Trigger: TCCATCACTAATAATAGCTCAGATCCTTTCCTCAAT...TGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR TCA 90 bp CTACATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCTCACTTATTGAGGAAAGGATCTaGGCTATTATTAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: LHPSYNGSDYSQVRKGSLIEERI*AIISDG
Trigger: TCCATCACTAATAATAGCTCAGATCCTTTCCTCAAT...AAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR GCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCTAGATCACTTCTTCTaGAGAGAGCTTTTCAACCAA +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNLDHFF*RELFNQ
Trigger: TTGGTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCCTAGATCACTTCTTCTaGAGAGAGCTTTTCAACCAA +
Preference number: 4 (lower is better)
Translates to: VISNTSVSLDHFFCRELFLDHFF*RELFNQ
Trigger: TTGGTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAG...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp CTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAGGAAATGTAAGGTCATaGCTACATCCAAGTTACAAT +
Preference number: 4 (lower is better)
Translates to: LQIPKFLSQRLFLEDSQGGNVRS*LHPSYN
Trigger: ATTGTAACTTGGATGTAGCCATGACCTTACATTTCC...TCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACAGAAGTAACTGCCTGTaGTCAGCTTTTTATGGTTTA +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNRSNCL*SAFYGL
Trigger: TAAACCATAAAAAGCTGACCACAGGCAGTTACTTCT...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CCA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACCAAATAAGTCCCCCATaGAAATTGAAAGTATCCTCT +
Preference number: 4 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNQISPP*KLKVSS
Trigger: AGAGGATACTTTCAATTTCCATGGGGGACTTATTTG...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR GCA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCATGGTCTCTGTCAATTaGCCATTTTCCCAATTAAAT +
Preference number: 4 (lower is better)
Translates to: VISNTSVSLDHFFCRELFMVSVN*PFSQLN
Trigger: ATTTAATTGGGAAAATGGGCAATTGACAGAGACCAT...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS GCA 90 bp TGCTGCTGCGCGGGGCTACCCGCAGCACCCGCGCCGGTGCCCAGCTaGAGGGACGCGGGCGACGAGTGCGAGCGGACATGCTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: CCCAGLPAAPAPVPS*RDAGDECERTCWAP
Trigger: GGGTGCCCAGCATGTCCGCTCGCACTCGTCGCCCGCGTCCCTGCAGCTGGGCACCGGCGCGGGTGCTGCGGGTAGCCCCGCGCAGCAGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS GCA 90 bp GGTGCGCGTGCTGCTGCGCGGGGCTACCCGCAGCACCCGCGCCGGTaGCCAGCTGCAGGGACGCGGGCGACGAGTGCGAGCGGACATGCT +
Preference number: 5 (lower is better)
Translates to: GARAAARGYPQHPRR*PAAGTRATSASGHA
Trigger: AGCATGTCCGCTCGCACTCGTCGCCCGCGTCCCTGCAGCTGGGCACCGGCGCGGGTGCTGCGGGTAGCCCCGCGCAGCAGCACGCGCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000479238.1
ENST00000485352.1
CDS CCA 90 bp TGCGAGCGGACATGCTGGGCACCCCCAGCCAGTCGAGGCCCCGGGTaGCCGCCCGACGAGTCGGTGCTGGACTGGCGCGAGTGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: CERTCWAPPASRGPG*PPDESVLDWRECEP
Trigger: GGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 90 bp CCGAGCCAACTCCACCACGTCTCGACTCCGGAAGCCCGAGGAGCCTaGAGCCCTGGAGTGGTGCCGGATGAGCGCGCGAGCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: PSQLHHVSTPEARGA*SPGVVPDERASSSG
Trigger: CCCGCTGGAGCTCGCGCGCTCATCCGGCACCACTCCAGGGCTCCAGGCTCCTCGGGCTTCCGGAGTCGAGACGTGGTGGAGTTGGCTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460517.1
CDS TCA 90 bp GCCGCCGTCCCGCCCGAACTTGCCGTCGGGCCTGGGTCGCTCGGGTaGGTCCCGAGATTGCGGAGCTGGAGCCGAGGCTTGGCTGACAAA +
Preference number: 5 (lower is better)
Translates to: AAVPPELAVGPGSLG*VPRLRSWSRGLADK
Trigger: TTTGTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAGTTCGGGCGGGACGGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000460517.1
CDS CCA 90 bp CCTCTGGCCAGTGGCCGTGAAGGTCATCTCCCAGCCCGGGGGCAGTaGCAGCTCGTCGGTCACGTCGTAGGACTGCTGGCGGAGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PLASGREGHLPARGQ*QLVGHVVGLLAEVR
Trigger: GCGCACCTCCGCCAGCAGTCCTACGACGTGACCGACGAGCTGCCACTGCCCCCGGGCTGGGAGATGACCTTCACGGCCACTGGCCAGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000479238.1
CDS CCA 90 bp GGCCGGATTCATCTTCACGTCTCGACTCCGGAAGCCCGAGGAGCCTaGAGCCCTGGAGTGGTGCCGGATGAGCGCGCGAGCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GRIHLHVSTPEARGA*SPGVVPDERASSSG
Trigger: CCCGCTGGAGCTCGCGCGCTCATCCGGCACCACTCCAGGGCTCCAGGCTCCTCGGGCTTCCGGAGTCGAGACGTGAAGATGAATCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485352.1
CDS GCA 90 bp GGCCCCGGGTGGCCGCCCGACGAGTCGGTGCTGGACTGGCGCGAGTaGGAGCCCGAATCAGGCTCCTTAAAGAAAGACTCCGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: GPGWPPDESVLDWRE*EPESGSLKKDSGRI
Trigger: GATCCTGCCGGAGTCTTTCTTTAAGGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 90 bp GCCAGTCGAGGCCCCGGGTGGCCGCCCGACGAGTCGGTGCTGGACTaGCGCGAGTGCGAGCCCGAATCAGGCTCCTTAAAGAAAGACTCC +
Preference number: 5 (lower is better)
Translates to: ASRGPGWPPDESVLD*RECEPESGSLKKDS
Trigger: GGAGTCTTTCTTTAAGGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS TCA 90 bp GCGCCGAGGCCGGATTCATTTGCCGTCGGGCCTGGGTCGCTCGGGTaGGTCCCGAGATTGCGGAGCTGGAGCCGAGGCTTGGCTGACAAA +
Preference number: 5 (lower is better)
Translates to: APRPDSFAVGPGSLG*VPRLRSWSRGLADK
Trigger: TTTGTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAATGAATCCGGCCTCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467467.5
CDS GCA 90 bp CCGAACTTGCCGTCGGGCCTGGGTCGCTCGGGTGAGTCCCGAGATTaGGGAGCTGGAGCCGAGGCTTGGCTGACAAATCCCGACCCGACT +
Preference number: 5 (lower is better)
Translates to: PNLPSGLGRSGESRD*GAGAEAWLTNPDPT
Trigger: AGTCGGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAGTTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000460517.1
CDS-3UTR CAA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCACCGTCCCGCCCGAACTaGCCGTCGGGCCTGGGTCGC +
Preference number: 5 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAPSRPN*PSGLGR
Trigger: GCGACCCAGGCCCGACGGCAAGTTCGGGCGGGACGG...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360632.8
CDS-3UTR CAA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCCGTGACGTGGATCACTaGCTGCCCAGGCGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: KEGARVMEAGSGAPADLLRDVDH*LPRRRE
Trigger: CTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCACG...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCCGAGGCCGGATTCATTaGCCGTCGGGCCTGGGTCGC +
Preference number: 5 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIRGRIH*PSGLGR
Trigger: GCGACCCAGGCCCGACGGCAAATGAATCCGGCCTCG...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467467.5
CDS TCA 90 bp GCTCGGGTGAGTCCCGAGATTGCGGAGCTGGAGCCGAGGCTTGGCTaGCAAATCCCGACCCGACTCTGTGCCTGGCAGTCTAAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ARVSPEIAELEPRLG*QIPTRLCAWQSKGF
Trigger: GAAGCCCTTAGACTGCCAGGCACAGAGTCGGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000460517.1
ENST00000467467.5
CDS TCA 90 bp GTGGTCAGCGCATTGGGCATACTCATGAGCCCTGCGGGTGGGTTCTaGGTGGGGTGGTTCTGCTGGCTCAGGGTACTGGGGGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: VVSALGILMSPAGGF*VGWFCWLRVLGAIC
Trigger: GCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS GCA 90 bp ATTCATTTGCCGTCGGGCCTGGGTCGCTCGGGTGAGTCCCGAGATTaGGGAGCTGGAGCCGAGGCTTGGCTGACAAATCCCGACCCGACT +
Preference number: 5 (lower is better)
Translates to: IHLPSGLGRSGESRD*GAGAEAWLTNPDPT
Trigger: AGTCGGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAATGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467467.5
CDS CCA 90 bp CTGCTGAGTGGTCAGCGCATTGGGCATACTCATGAGCCCTGCGGGTaGGTTCTGAGTGGGGTGGTTCTGCTGGCTCAGGGTACTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LLSGQRIGHTHEPCG*VLSGVVLLAQGTGG
Trigger: GCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS GCA 90 bp TTCATGACAGAGTTGAAGAGGGCTTCGAGGTCTGTGTCTAGGTCCTaGGTGACGTGGATCACTTGCTGCCCAGGCGGCGGGAGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: FMTELKRASRSVSRS*VTWITCCPGGGSGG
Trigger: CCCTCCGCTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCTAGACACAGACCTCGAAGCCCTCTTCAACTCTGTCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS-3UTR CAA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACGTGACGTGGATCACTaGCTGCCCAGGCGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQRDVDH*LPRRRE
Trigger: CTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCACG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTCAGCAGGCTACGCTCTaGTCTGCCTGTACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RREHESWRREVVHLQTCSQQATL*SACTLS
Trigger: GCTGAGCGTACAGGCAGACAAGAGCGTAGCCTGCTG...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS CCA 90 bp TCTCATGTCTGGGGTCATCGTGGGTGGGTTGACAGCAGCCTGAACTaGGGCAAGAGTCTCAGCTTCCATGGGGAGCTGTCGACAGAGGGC +
Preference number: 5 (lower is better)
Translates to: SHVWGHRGWVDSSLN*GKSLSFHGELSTEG
Trigger: GCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000471586.5
ENST00000472417.1
ENST00000485244.1
ENST00000494754.1
CDS-3UTR CAA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCAGCAGGCTACGCTCTaGTCTGCCTGTACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KRREHESWRREVVHLQTCQQATL*SACTLS
Trigger: GCTGAGCGTACAGGCAGACAAGAGCGTAGCCTGCTG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS CCA 90 bp CTGCGGGTGGGTTCTGAGTGGGGTGGTTCTGCTGGCTCAGGGTACTaGGGGCCATCTGCTGCTGGTGTTGGTGATTCATCACGAGATTTG +
Preference number: 5 (lower is better)
Translates to: LRVGSEWGGSAGSGY*GPSAAGVGDSSRDL
Trigger: CAAATCTCGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS-3UTR CAA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTAGCTGGAGCCGAGGCTaGGCTGACAAATCCCGACCC +
Preference number: 5 (lower is better)
Translates to: VMEAGSGAPADLLCSITFSWSRG*ADKSRP
Trigger: GGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGCT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CAA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTAGCTGGAGCCGAGGCTaGGCTGACAAATCCCGACCC +
Preference number: 5 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFSWSRG*ADKSRP
Trigger: GGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGCT...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000467467.5
CDS-3UTR CAA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTGGAAGTCCTCCGGAGTaGTGGGGACACTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLGSPPE*WGHCST
Trigger: GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCC...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS TCA 90 bp AAGATAGGGCGAGGGGTGGAGGGAATAACTGCACTCGGGGCTTGCTaGACCGCAGGATGGCAAAGGAAAGGTCGCACGATTCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: KIGRGVEGITALGAC*TAGWQRKGRTIPGQ
Trigger: CTGTCCTGGAATCGTGCGACCTTTCCTTTGCCATCCTGCGGTTCAGCAAGCCCCGAGTGCAGTTATTCCCTCCACCCCTCGCCCTATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460517.1
CDS-3UTR CAA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGGTGCACCTGCAGACTaGCTCTGCTCCATCACTTTT +
Preference number: 5 (lower is better)
Translates to: RREHESWRREVVHLQTCSGAPAD*LCSITF
Trigger: AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTAGTAATCCCAGCACTTaGGGAGGCCGAGATGGGTGG +
Preference number: 5 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLSNPST*GGRDGW
Trigger: CCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACT...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGGATTCATGACAGAGTaGAAGAGGGCTTCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIGFMTE*KRASRS
Trigger: AGACCTCGAAGCCCTCTTCAACTCTGTCATGAATCC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAGGAAGTCCTCCGGAGTaGTGGGGACACTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAGSPPE*WGHCST
Trigger: GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCC...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCCGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: KEGARVMEAGSGAPADLLRVCWG*MFMGVC
Trigger: ACAAACACCCATGAACATCAATCCCCAACAGACCCG...GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCAGGGAAACGGGTCTGTaGGGGATTGATGTTCATGGG +
Preference number: 5 (lower is better)
Translates to: KRREHESWRREVVHLQTCRETGL*GIDVHG
Trigger: CCCATGAACATCAATCCCCAACAGACCCGTTTCCCT...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGCAGACTCTACATCATaGAAGAGGGGGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIADSTS*KRGIRS
Trigger: AGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCGCTGGAGGGACTAAGTaGTCTAGATGCTCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIAGGTK*SRCSAV
Trigger: TACTGCAGAGCATCTAGACAACTTAGTCCCTCCAGC...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCCAGTTGAGGACTTCATaGGCAATGCAGGCAGACTGC +
Preference number: 5 (lower is better)
Translates to: KRREHESWRREVVHLQTCQLRTS*AMQADC
Trigger: GCAGTCTGCCTGCATTGCCAATGAAGTCCTCAACTG...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCCTCATGAGCTCCTCTaGGCGCATTCGAATCCTTTC +
Preference number: 5 (lower is better)
Translates to: GNIKRREHESWRREVVHLPHELL*AHSNPF
Trigger: GAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGG...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGATGTTCATGGGTGTTaGTCCTGCGTTTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: RREHESWRREVVHLQTCSDVHGC*SCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATC...AGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS TCA 90 bp TTGGCTGGGATACTGCCATGGACCTCTGAGGCACTGGTGTGGAACTaGCGGCAGGGTGGAGGTTCATATGATTCAGAGGCTGATTCATCG +
Preference number: 5 (lower is better)
Translates to: LAGILPWTSEALVWN*RQGGGSYDSEADSS
Trigger: CGATGAATCAGCCTCTGAATCATATGAACCTCCACCCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
ENST00000479238.1
CDS CCA 90 bp CATCACGAGATTTGGCTGGGATACTGCCATGGACCTCTGAGGCACTaGTGTGGAACTGACGGCAGGGTGGAGGTTCATATGATTCAGAGG +
Preference number: 5 (lower is better)
Translates to: HHEIWLGYCHGPLRH*CGTDGRVEVHMIQR
Trigger: CCTCTGAATCATATGAACCTCCACCCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAAATCTCGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS-3UTR CAA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCACCTCATGAGCTCCTCTaGGCGCATTCGAATCCTTTC +
Preference number: 5 (lower is better)
Translates to: QHKKEGARVMEAGSGAPAPHELL*AHSNPF
Trigger: GAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGG...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp ACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGAGGAAGTCCTCCGGAGTaGTGGGGACACTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: TFVPGRQSRKSGKRVCWGGSPPE*WGHCST
Trigger: GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCC...TCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTCGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLRVCWG*MFMGVC
Trigger: ACAAACACCCATGAACATCAATCCCCAACAGACCCG...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp CTAACCCCAGGCCACTGTCAGTGCTCTGCTCCCTCGAATGATATGGCCCTCCATCGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: LTPGHCQCSAPSNDMALHRVCWG*MFMGVC
Trigger: ACAAACACCCATGAACATCAATCCCCAACAGACCCG...ATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGGTGCACCTGCAGACTaGCTCTGCTCCATCACTTTT +
Preference number: 5 (lower is better)
Translates to: NIKRREHESWRREVVHLQGAPAD*LCSITF
Trigger: AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCAGTTGAGGACTTCATaGGCAATGCAGGCAGACTGC +
Preference number: 5 (lower is better)
Translates to: VMEAGSGAPADLLCSITFQLRTS*AMQADC
Trigger: GCAGTCTGCCTGCATTGCCAATGAAGTCCTCAACTG...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGGATTCATGACAGAGTaGAAGAGGGCTTCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: NIKRREHESWRREVVHLQGFMTE*KRASRS
Trigger: AGACCTCGAAGCCCTCTTCAACTCTGTCATGAATCC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCGGATTCATGACAGAGTaGAAGAGGGCTTCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: MEAGSGAPADLLCSITFSGFMTE*KRASRS
Trigger: AGACCTCGAAGCCCTCTTCAACTCTGTCATGAATCC...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp CAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGATTCATCACGAGATTaGGCTGGGATACTGCCATGG +
Preference number: 5 (lower is better)
Translates to: QHKKEGARVMEAGSGAPADSSRD*AGILPW
Trigger: CCATGGCAGTATCCCAGCCAAATCTCGTGATGAATC...TGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCGATTCATCACGAGATTaGGCTGGGATACTGCCATGG +
Preference number: 5 (lower is better)
Translates to: MEAGSGAPADLLCSITFSDSSRD*AGILPW
Trigger: CCATGGCAGTATCCCAGCCAAATCTCGTGATGAATC...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTCATCTGCTGCTGGTGTaGGTGATTCATCACGAGATT +
Preference number: 5 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLHLLLV*VIHHEI
Trigger: AATCTCGTGATGAATCACCAACACCAGCAGCAGATG...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTCATGAGCTCCTCTaGGCGCATTCGAATCCTTTC +
Preference number: 5 (lower is better)
Translates to: NWQHKKEGARVMEAGSGAPHELL*AHSNPF
Trigger: GAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGG...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGATGTTCATGGGTGTTaGTCCTGCGTTTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GNIKRREHESWRREVVHLDVHGC*SCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: VMEAGSGAPADLLCSITFRVCWG*MFMGVC
Trigger: ACAAACACCCATGAACATCAATCCCCAACAGACCCG...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAAGGGAAACGGGTCTGTaGGGGATTGATGTTCATGGG +
Preference number: 5 (lower is better)
Translates to: NWQHKKEGARVMEAGSGARETGL*GIDVHG
Trigger: CCCATGAACATCAATCCCCAACAGACCCGTTTCCCT...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTGCAGACTCTACATCATaGAAGAGGGGGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: VMEAGSGAPADLLCSITFADSTS*KRGIRS
Trigger: AGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTGCAGACTCTACATCATaGAAGAGGGGGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFADSTS*KRGIRS
Trigger: AGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAGCTGGAGGGACTAAGTaGTCTAGATGCTCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQAGGTK*SRCSAV
Trigger: TACTGCAGAGCATCTAGACAACTTAGTCCCTCCAGC...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCCATCTCCTGCTTGTTTaGCTTTTGGGGTACTATAAC +
Preference number: 5 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIHLLLV*LLGYYN
Trigger: GTTATAGTACCCCAAAAGCAAAACAAGCAGGAGATG...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS TCA 90 bp ACTGGCCACAGGCCCACACAGTCTAGGCCTACTCGAATATCTGCCTaGGTTGCCTTTCCTGAAGTCAGTTCTGCCAGGAAGGTATCAGTT +
Preference number: 5 (lower is better)
Translates to: TGHRPTQSRPTRISA*VAFPEVSSARKVSV
Trigger: AACTGATACCTTCCTGGCAGAACTGACTTCAGGAAAGGCAACTCAGGCAGATATTCGAGTAGGCCTAGACTGTGTGGGCCTGTGGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS-3UTR CAA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACATCTGCTGCTGGTGTaGGTGATTCATCACGAGATT +
Preference number: 5 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQHLLLV*VIHHEI
Trigger: AATCTCGTGATGAATCACCAACACCAGCAGCAGATG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCACATCTGCTGCTGGTGTaGGTGATTCATCACGAGATT +
Preference number: 5 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPHLLLV*VIHHEI
Trigger: AATCTCGTGATGAATCACCAACACCAGCAGCAGATG...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGGATGTTCATGGGTGTTaGTCCTGCGTTTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: NIKRREHESWRREVVHLQDVHGC*SCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATC...CTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCCACAAGAACGCAGGCTaGCAGAAAATGAAAATAGAA +
Preference number: 5 (lower is better)
Translates to: ARVMEAGSGAPADLLCSIHKNAG*QKMKIE
Trigger: TTCTATTTTCATTTTCTGCAAGCCTGCGTTCTTGTG...GATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTAGTCCCCCATGGAAATaGAAAGTATCCTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLSPPWK*KVSSQR
Trigger: TCTCTGAGAGGATACTTTCAATTTCCATGGGGGACT...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGGGTGGCAACAGAAAATaGTTGCTTTGTCCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: GNIKRREHESWRREVVHLGGNRK*LLCPFG
Trigger: CCCAAAAGGACAAAGCAACAATTTTCTGTTGCCACC...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp AAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCAGCTTTTCAACCAAGTaGGCATCAACCAGCACAATA +
Preference number: 5 (lower is better)
Translates to: KRREHESWRREVVHLQTCSFSTK*ASTSTI
Trigger: TATTGTGCTGGTTGATGCCAACTTGGTTGAAAAGCT...GCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp TTTGTTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCGGAAGTCCTCCGGAGTaGTGGGGACACTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: FVQSRLYIIEEGDQVFRFGSPPE*WGHCST
Trigger: GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCC...GAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp CAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGAGGGAAACGGGTCTGTaGGGGATTGATGTTCATGGG +
Preference number: 5 (lower is better)
Translates to: QRLFLEDSQGNQGNGSVGRETGL*GIDVHG
Trigger: CCCATGAACATCAATCCCCAACAGACCCGTTTCCCT...CCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp GGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCACCTGTTCCTAAGTCAACGTTaGTTCCTGGAAGACAGTCAA +
Preference number: 5 (lower is better)
Translates to: GNIKRREHESWRREVVHLFLSQR*FLEDSQ
Trigger: TTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAA...CAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp GAGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTCCTAAGTCAACGTTaGTTCCTGGAAGACAGTCAA +
Preference number: 5 (lower is better)
Translates to: ESWRREVVHLQTCSAPSLFLSQR*FLEDSQ
Trigger: TTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAA...AAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTAGAAAGGGCTCACTTTaGTTCAGAGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFRKGSL*FRADST
Trigger: TGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCT...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAGTCCCCCATGGAAATaGAAAGTATCCTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPSPPWK*KVSSQR
Trigger: TCTCTGAGAGGATACTTTCAATTTCCATGGGGGACT...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCGGTGGCAACAGAAAATaGTTGCTTTGTCCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: MEAGSGAPADLLCSITFSGGNRK*LLCPFG
Trigger: CCCAAAAGGACAAAGCAACAATTTTCTGTTGCCACC...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp TGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCATATAAGGCCTTGTGTTaGGGAGTCTCTGGTGTTGTA +
Preference number: 5 (lower is better)
Translates to: WRREVVHLQTCSAPSLFPYKALC*GVSGVV
Trigger: TACAACACCAGAGACTCCCAAACACAAGGCCTTATA...TGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS-3UTR CAA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTAGTCAATATAAGGCCTaGTGTTTGGGAGTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: VMEAGSGAPADLLCSITFSQYKA*CLGVSG
Trigger: ACCAGAGACTCCCAAACACAAGGCCTTATATTGACT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465804.5
CDS TCA 90 bp AGCTGTAAGGCTGCGCTAACATGGTGTCAAGAGTGGCTCCCAGGCTaGATGCAACAAGTAAGAGTGAGCTATTGCTCACAAGAGGCACTT +
Preference number: 5 (lower is better)
Translates to: SCKAALTWCQEWLPG*MQQVRVSYCSQEAL
Trigger: AAGTGCCTCTTGTGAGCAATAGCTCACTCTTACTTGTTGCATTCAGCCTGGGAGCCACTCTTGACACCATGTTAGCGCAGCCTTACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472417.1
CDS-3UTR CAA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCTTCCTAAGTCAACGTTaGTTCCTGGAAGACAGTCAA +
Preference number: 5 (lower is better)
Translates to: MEAGSGAPADLLCSITFSFLSQR*FLEDSQ
Trigger: TTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAA...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp AACTGGCAACATAAAAAGGAGGGAGCACGAGTCATGGAGGCGGGAAGTGGTGCAAGAAAGGGCTCACTTTaGTTCAGAGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: NWQHKKEGARVMEAGSGARKGSL*FRADST
Trigger: TGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCT...TGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
CDS-3UTR CAA 90 bp ATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAAATCAGGTCGAATTTaGTGCACATTTCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: MEAGSGAPADLLCSITFSKSGRI*CTFPGP
Trigger: TGGTCCAGGAAATGTGCACAAAATTCGACCTGATTT...GGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTAAATCAGGTCGAATTTaGTGCACATTTCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFKSGRI*CTFPGP
Trigger: TGGTCCAGGAAATGTGCACAAAATTCGACCTGATTT...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS CCA 90 bp AGAGGAGTGTGTCATAAAGTGGGAGCCTGGATTTCAGAGTCCATCTaGAGCACACATGTTGTTTACATCTTCCGTCTCTGGTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: RGVCHKVGAWISESI*STHVVYIFRLWWVC
Trigger: ACACACCCACCAGAGACGGAAGATGTAAACAACATGTGTGCTCCAGATGGACTCTGAAATCCAGGCTCCCACTTTATGACACACTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS-3UTR CAA 90 bp ATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAACGGAAGTCCTCCGGAGTaGTGGGGACACTGTAGCACC +
Preference number: 5 (lower is better)
Translates to: ISNTSVSLDHFFCRELFNGSPPE*WGHCST
Trigger: GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCC...GTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp GTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCCGGGTCTGTTGGGGATaGATGTTCATGGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: VCWGLMFMGVCPAFSPVSRVCWG*MFMGVC
Trigger: ACAAACACCCATGAACATCAATCCCCAACAGACCCG...GGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp CAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCAGATTCCAAAGTAGGGAAACGGGTCTGTaGGGGATTGATGTTCATGGG +
Preference number: 5 (lower is better)
Translates to: QSRLYIIEEGDQVFRFQSRETGL*GIDVHG
Trigger: CCCATGAACATCAATCCCCAACAGACCCGTTTCCCT...ACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp GGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTCCAACACAAGAACGCAGGCTaGCAGAAAATGAAAATAGAA +
Preference number: 5 (lower is better)
Translates to: GGGKWCTCRLALLHHFFQHKNAG*QKMKIE
Trigger: TTCTATTTTCATTTTCTGCAAGCCTGCGTTCTTGTG...TTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS TCA 90 bp TTGCTTACCAGAATGACCACTGCATTTCTGAGACTGCAAGGCTGTTaGTTCTGTTTTGTTGTGAGACTGGCCACAGGCCCACACAGTCTA +
Preference number: 5 (lower is better)
Translates to: LLTRMTTAFLRLQGC*FCFVVRLATGPHSL
Trigger: TAGACTGTGTGGGCCTGTGGCCAGTCTCACAACAAAACAGAATCAACAGCCTTGCAGTCTCAGAAATGCAGTGGTCATTCTGGTAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CCA 90 bp GAGGCCGGATTCATCTTCTGGAAAATCACTAGTAAGCGTGGCTTATaGGTCAGTTCAGATCCACCAGGAAGCAGATGCCAAGATAAGAGT +
Preference number: 5 (lower is better)
Translates to: EAGFIFWKITSKRGL*VSSDPPGSRCQDKS
Trigger: ACTCTTATCTTGGCATCTGCTTCCTGGTGGATCTGAACTGACCCATAAGCCACGCTTACTAGTGATTTTCCAGAAGATGAATCCGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465804.5
ENST00000475579.1
CDS CCA 90 bp GGGAGTCTCTGGTGTTGTAGAGGAGTGTGTCATAAAGTGGGAGCCTaGATTTCAGAGTCCATCTGGAGCACACATGTTGTTTACATCTTC +
Preference number: 5 (lower is better)
Translates to: GSLWCCRGVCHKVGA*ISESIWSTHVVYIF
Trigger: GAAGATGTAAACAACATGTGTGCTCCAGATGGACTCTGAAATCCAGGCTCCCACTTTATGACACACTCCTCTACAACACCAGAGACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS-3UTR CAA 90 bp CTCACTTTTGTTCAGAGCAGACTCTACATCATTGAAGAGGGGGATCAGGTCTTCGCAGACTCTACATCATaGAAGAGGGGGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LTFVQSRLYIIEEGDQVFADSTS*KRGIRS
Trigger: AGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC...GAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp CCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTTGGGGATTGATGTTCAGAAAGGGCTCACTTTaGTTCAGAGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: PGRQSRKSGKRVCWGLMFRKGSL*FRADST
Trigger: TGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCT...GAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTACATTTGGCTGCCTTTaGTCATCAGCTACAAAATTA +
Preference number: 5 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFTFGCL*SSATKL
Trigger: TAATTTTGTAGCTGATGACAAAAGGCAGCCAAATGT...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp GTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTACATTTGGCTGCCTTTaGTCATCAGCTACAAAATTA +
Preference number: 5 (lower is better)
Translates to: VMEAGSGAPADLLCSITFTFGCL*SSATKL
Trigger: TAATTTTGTAGCTGATGACAAAAGGCAGCCAAATGT...AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp AGTCATGGAGGCGGGAAGTGGTGCACCTGCAGACTTGCTCTGCTCCATCACTTTTTGGGGTACTATAACTaGTCTCTTTCCATTTCACAA +
Preference number: 5 (lower is better)
Translates to: SHGGGKWCTCRLALLHHFLGYYN*SLSISQ
Trigger: TTGTGAAATGGAAAGAGACAAGTTATAGTACCCCAA...AAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS CCA 90 bp TTGTGTTTGGGAGTCTCTGGTGTTGTAGAGGAGTGTGTCATAAAGTaGGAGCCTGGATTTCAGAGTCCATCTGGAGCACACATGTTGTTT +
Preference number: 5 (lower is better)
Translates to: LCLGVSGVVEECVIK*EPGFQSPSGAHMLF
Trigger: AAACAACATGTGTGCTCCAGATGGACTCTGAAATCCAGGCTCCCACTTTATGACACACTCCTCTACAACACCAGAGACTCCCAAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS-3UTR CAA 90 bp AAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAACGGGTCTGTGATGTTCATGGGTGTTaGTCCTGCGTTTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: KSTFVPGRQSRKSGKRVCDVHGC*SCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATC...ACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp GTCTGTTGGGGATTGATGTTCATGGGTGTTTGTCCTGCGTTTTCTCCTGTATCCAGAAAGGGCTCACTTTaGTTCAGAGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: VCWGLMFMGVCPAFSPVSRKGSL*FRADST
Trigger: TGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCT...GGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp TCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGGCAGACTCTACATCATaGAAGAGGGGGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SSDSKVPKSTFVPGRQSRADSTS*KRGIRS
Trigger: AGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGC...CCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCGGTGCACCTGCAGACTaGCTCTGCTCCATCACTTTT +
Preference number: 5 (lower is better)
Translates to: VISNTSVSLDHFFCRELFGAPAD*LCSITF
Trigger: AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACC...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS-3UTR CAA 90 bp AAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGGGAAAGGTGCACCTGCAGACTaGCTCTGCTCCATCACTTTT +
Preference number: 5 (lower is better)
Translates to: KVPKSTFVPGRQSRKSGKGAPAD*LCSITF
Trigger: AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACC...TTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471586.5
CDS TCA 90 bp GATTTTAGTCACTCTGAGGTTTCTCTCTTGAGAGTCGCCAGGATGTaGGCTGAAATGAGTCAATATAAGGCCTTGTGTTTGGGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: DFSHSEVSLLRVARM*AEMSQYKALCLGVS
Trigger: AGAGACTCCCAAACACAAGGCCTTATATTGACTCATTTCAGCTCACATCCTGGCGACTCTCAAGAGAGAAACCTCAGAGTGACTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465804.5
ENST00000474080.1
CDS-3UTR CAA 90 bp CATCCAAGTTACAATGGTAGTGATTACAGCCAGGTTAGAAAGGGCTCACTTTTGGATGTTCATGGGTGTTaGTCCTGCGTTTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: HPSYNGSDYSQVRKGSLLDVHGC*SCVFSC
Trigger: ACAGGAGAAAACGCAGGACAAACACCCATGAACATC...CAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS TCA 90 bp CCTTCCGTACTCTGTATTTGTCATCTGTGTACCTGTGATGAAAGGTaGTTTGCTGGGCTGATGACAGCAGTCATCAGTCATATTTGTATT +
Preference number: 5 (lower is better)
Translates to: PSVLCICHLCTCDER*FAGLMTAVISHICI
Trigger: AATACAAATATGACTGATGACTGCTGTCATCAGCCCAGCAAATCACCTTTCATCACAGGTACACAGATGACAAATACAGAGTACGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS-3UTR CAA 90 bp ATCAGGTCTTCAGATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTTCCTAAGTCAACGTTaGTTCCTGGAAGACAGTCAA +
Preference number: 5 (lower is better)
Translates to: IRSSDSKVPKSTFVPGRQFLSQR*FLEDSQ
Trigger: TTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAA...CTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp ATTCCAAAGTTCCTAAGTCAACGTTTGTTCCTGGAAGACAGTCAAGGAAATCAGTTCCTAAGTCAACGTTaGTTCCTGGAAGACAGTCAA +
Preference number: 5 (lower is better)
Translates to: IPKFLSQRLFLEDSQGNQFLSQR*FLEDSQ
Trigger: TTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAA...CTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471586.5
ENST00000494754.1
CDS-3UTR CAA 90 bp GTAATTAGCAACACTTCTGTCAGTCTAGATCACTTCTTCTGCAGAGAGCTTTTCAGCTTTTCAACCAAGTaGGCATCAACCAGCACAATA +
Preference number: 5 (lower is better)
Translates to: VISNTSVSLDHFFCRELFSFSTK*ASTSTI
Trigger: TATTGTGCTGGTTGATGCCAACTTGGTTGAAAAGCT...GAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000465804.5
CDS TCA 90 bp CCTACATTAAACAATGAACACTGTACAAACAATATGCAAGTGTTATaGATGTTGTCTGTCTCAGAATGGCAGGCTGGCTCAATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: PTLNNEHCTNNMQVL*MLSVSEWQAGSMQR
Trigger: TCTCTGCATTGAGCCAGCCTGCCATTCTGAGACAGACAACATTCATAACACTTGCATATTGTTTGTACAGTGTTCATTGTTTAATGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS GCA 90 bp AAGTGTTATGAATGTTGTCTGTCTCAGAATGGCAGGCTGGCTCAATaGAGAGATTCTGGGTTTTGGAGAAAAATTCTACAAATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KCYECCLSQNGRLAQ*RDSGFWRKILQILL
Trigger: AAGCAAGATTTGTAGAATTTTTCTCCAAAACCCAGAATCTCTGCATTGAGCCAGCCTGCCATTCTGAGACAGACAACATTCATAACACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CCA 90 bp GCTGGGCTGATGACAGCAGTCATCAGTCATATTTGTATTATAGAATaGAAAAGTTTGCCATATACTAGCAAGAATAAGCATATGATTCCT +
Preference number: 5 (lower is better)
Translates to: AGLMTAVISHICIIE*KSLPYTSKNKHMIP
Trigger: AGGAATCATATGCTTATTCTTGCTAGTATATGGCAAACTTTTCCATTCTATAATACAAATATGACTGATGACTGCTGTCATCAGCCCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS GCA 72 bp GCGGGGCTACCCGCAGCACCCGCGCCGGTGCCCAGCTaGAGGGACGCGGGCGACGAGTGCGAGCGGACATGC +
Preference number: 6 (lower is better)
Translates to: AGLPAAPAPVPS*RDAGDECERTC
Trigger: GCATGTCCGCTCGCACTCGTCGCCCGCGTCCCTGCAGCTGGGCACCGGCGCGGGTGCTGCGGGTAGCCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp TGCAGGGACGCGGGCGACGAGTGCGAGCGGACATGCTaGGCACCCCCAGCCAGTCGAGGCCCCGGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: CRDAGDECERTC*APPASRGPGWP
Trigger: CGGCCACCCGGGGCCTCGACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCACTCGTCGCCCGCGTCCCTGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp GGCGGCCGCCGTCCCGCCCGAACTTGCCGTCGGGCCTaGGTCGCTCGGGTGAGTCCCGAGATTGCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GGRRPARTCRRA*VARVSPEIAEL
Trigger: CAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAGTTCGGGCGGGACGGCGGCCGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000460517.1
CDS CCA 72 bp ACATGCTGGGCACCCCCAGCCAGTCGAGGCCCCGGGTaGCCGCCCGACGAGTCGGTGCTGGACTGGCGCGAG +
Preference number: 6 (lower is better)
Translates to: TCWAPPASRGPG*PPDESVLDWRE
Trigger: CTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACTGGCTGGGGGTGCCCAGCATGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS GCA 72 bp CCAGTCGAGGCCCCGGGTGGCCGCCCGACGAGTCGGTaGTGGACTGGCGCGAGTGCGAGCCCGAATCAGGCT +
Preference number: 6 (lower is better)
Translates to: PVEAPGGRPTSR*WTGASASPNQA
Trigger: AGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp GTCGAGGCCCCGGGTGGCCGCCCGACGAGTCGGTGCTaGACTGGCGCGAGTGCGAGCCCGAATCAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: VEAPGGRPTSRC*TGASASPNQAP
Trigger: AGGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCCTCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS TCA 72 bp CCGCCCGAACTTGCCGTCGGGCCTGGGTCGCTCGGGTaGGTCCCGAGATTGCGGAGCTGGAGCCGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: PPELAVGPGSLG*VPRLRSWSRGL
Trigger: CAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAGTTCGGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360632.8
ENST00000460517.1
CDS CCA 72 bp GGCCCCGGGTGGCCGCCCGACGAGTCGGTGCTGGACTaGCGCGAGTGCGAGCCCGAATCAGGCTCCTTAAAG +
Preference number: 6 (lower is better)
Translates to: GPGWPPDESVLD*RECEPESGSLK
Trigger: CTTTAAGGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp GGGGGCGCCGAGGCCGGATTCATTTGCCGTCGGGCCTaGGTCGCTCGGGTGAGTCCCGAGATTGCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GGAEAGFICRRA*VARVSPEIAEL
Trigger: CAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAATGAATCCGGCCTCGGCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467467.5
CDS CCA 72 bp CTCCACCACGTCTCGACTCCGGAAGCCCGAGGAGCCTaGAGCCCTGGAGTGGTGCCGGATGAGCGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: LHHVSTPEARGA*SPGVVPDERAS
Trigger: GCTCGCGCGCTCATCCGGCACCACTCCAGGGCTCCAGGCTCCTCGGGCTTCCGGAGTCGAGACGTGGTGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460517.1
CDS CCA 72 bp AGTGGCCGTGAAGGTCATCTCCCAGCCCGGGGGCAGTaGCAGCTCGTCGGTCACGTCGTAGGACTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: SGREGHLPARGQ*QLVGHVVGLLA
Trigger: CGCCAGCAGTCCTACGACGTGACCGACGAGCTGCCACTGCCCCCGGGCTGGGAGATGACCTTCACGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp CATCTTCACGTCTCGACTCCGGAAGCCCGAGGAGCCTaGAGCCCTGGAGTGGTGCCGGATGAGCGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: HLHVSTPEARGA*SPGVVPDERAS
Trigger: GCTCGCGCGCTCATCCGGCACCACTCCAGGGCTCCAGGCTCCTCGGGCTTCCGGAGTCGAGACGTGAAGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485352.1
CDS TCA 72 bp CCGGATTCATTTGCCGTCGGGCCTGGGTCGCTCGGGTaGGTCCCGAGATTGCGGAGCTGGAGCCGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: PDSFAVGPGSLG*VPRLRSWSRGL
Trigger: CAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACCCGAGCGACCCAGGCCCGACGGCAAATGAATCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467467.5
CDS CCA 72 bp AGGGCTTCGAGGTCTGTGTCTAGGTCCTGCGTGACGTaGATCACTTGCTGCCCAGGCGGCGGGAGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: RASRSVSRSCVT*ITCCPGGGSGG
Trigger: CCCTCCGCTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCTAGACACAGACCTCGAAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS GCA 72 bp TGGCCGCCCGACGAGTCGGTGCTGGACTGGCGCGAGTaGGAGCCCGAATCAGGCTCCTTAAAGAAAGACTCC +
Preference number: 6 (lower is better)
Translates to: WPPDESVLDWRE*EPESGSLKKDS
Trigger: GGAGTCTTTCTTTAAGGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp GGTGAGTCCCGAGATTGCGGAGCTGGAGCCGAGGCTTaGCTGACAAATCCCGACCCGACTCTGTGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GESRDCGAGAEA*LTNPDPTLCLA
Trigger: TGCCAGGCACAGAGTCGGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000460517.1
ENST00000467467.5
CDS TCA 72 bp AGTCCCGAGATTGCGGAGCTGGAGCCGAGGCTTGGCTaGCAAATCCCGACCCGACTCTGTGCCTGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SPEIAELEPRLG*QIPTRLCAWQS
Trigger: AGACTGCCAGGCACAGAGTCGGGTCGGGATTTGTCAGCCAAGCCTCGGCTCCAGCTCCGCAATCTCGGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360632.8
ENST00000460517.1
ENST00000467467.5
CDS TCA 72 bp GCATTGGGCATACTCATGAGCCCTGCGGGTGGGTTCTaGGTGGGGTGGTTCTGCTGGCTCAGGGTACTGGGG +
Preference number: 6 (lower is better)
Translates to: ALGILMSPAGGF*VGWFCWLRVLG
Trigger: CCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS GCA 72 bp GAGTTGAAGAGGGCTTCGAGGTCTGTGTCTAGGTCCTaGGTGACGTGGATCACTTGCTGCCCAGGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: ELKRASRSVSRS*VTWITCCPGGG
Trigger: CCCGCCGCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCTAGACACAGACCTCGAAGCCCTCTTCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp CAGCAGCCTGAACTGGGGCAAGAGTCTCAGCTTCCATaGGGAGCTGTCGACAGAGGGCAGCTTCCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: QQPELGQESQLP*GAVDRGQLPAS
Trigger: TGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
ENST00000485244.1
CDS CCA 72 bp TGGGGTCATCGTGGGTGGGTTGACAGCAGCCTGAACTaGGGCAAGAGTCTCAGCTTCCATGGGGAGCTGTCG +
Preference number: 6 (lower is better)
Translates to: WGHRGWVDSSLN*GKSLSFHGELS
Trigger: CGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000471586.5
ENST00000472417.1
ENST00000485244.1
ENST00000494754.1
CDS CAA 72 bp AGGGCGAGGGGTGGAGGGAATAACTGCACTCGGGGCTaGCTGAACCGCAGGATGGCAAAGGAAAGGTCGCAC +
Preference number: 6 (lower is better)
Translates to: RARGGGNNCTRG*LNRRMAKERSH
Trigger: GTGCGACCTTTCCTTTGCCATCCTGCGGTTCAGCAAGCCCCGAGTGCAGTTATTCCCTCCACCCCTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460517.1
CDS CAA 90 bp GGAGAAGATAGGGCGAGGGGTGGAGGGAATAACTGCACTCGGGGCTaGCTGAACCGCAGGATGGCAAAGGAAAGGTCGCACGATTCCAGG +
Preference number: 6 (lower is better)
Translates to: GEDRARGGGNNCTRG*LNRRMAKERSHDSR
Trigger: CCTGGAATCGTGCGACCTTTCCTTTGCCATCCTGCGGTTCAGCAAGCCCCGAGTGCAGTTATTCCCTCCACCCCTCGCCCTATCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460517.1
CDS TCA 72 bp ATCACGAGATTTGGCTGGGATACTGCCATGGACCTCTaGGGCACTGGTGTGGAACTGACGGCAGGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: ITRFGWDTAMDL*GTGVELTAGWR
Trigger: CCTCCACCCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAAATCTCGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS TCA 72 bp CGAGGGGTGGAGGGAATAACTGCACTCGGGGCTTGCTaGACCGCAGGATGGCAAAGGAAAGGTCGCACGATT +
Preference number: 6 (lower is better)
Translates to: RGVEGITALGAC*TAGWQRKGRTI
Trigger: AATCGTGCGACCTTTCCTTTGCCATCCTGCGGTTCAGCAAGCCCCGAGTGCAGTTATTCCCTCCACCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460517.1
CDS CAA 72 bp CTGGCTCAGGGTACTGGGGGCCATCTGCTGCTGGTGTaGGTGATTCATCACGAGATTTGGCTGGGATACTGC +
Preference number: 6 (lower is better)
Translates to: LAQGTGGHLLLV*VIHHEIWLGYC
Trigger: GCAGTATCCCAGCCAAATCTCGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS CAA 90 bp AGGATCTTCTTCCGCCACGAGCTAGGCTTCGGATTCATGACAGAGTaGAAGAGGGCTTCGAGGTCTGTGTCTAGGTCCTGCGTGACGTGG +
Preference number: 6 (lower is better)
Translates to: RIFFRHELGFGFMTE*KRASRSVSRSCVTW
Trigger: CCACGTCACGCAGGACCTAGACACAGACCTCGAAGCCCTCTTCAACTCTGTCATGAATCCGAAGCCTAGCTCGTGGCGGAAGAAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS CCA 72 bp ATTTGGCTGGGATACTGCCATGGACCTCTGAGGCACTaGTGTGGAACTGACGGCAGGGTGGAGGTTCATATG +
Preference number: 6 (lower is better)
Translates to: IWLGYCHGPLRH*CGTDGRVEVHM
Trigger: CATATGAACCTCCACCCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
ENST00000479238.1
CDS CAA 72 bp TTCCGCCACGAGCTAGGCTTCGGATTCATGACAGAGTaGAAGAGGGCTTCGAGGTCTGTGTCTAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: FRHELGFGFMTE*KRASRSVSRSC
Trigger: GCAGGACCTAGACACAGACCTCGAAGCCCTCTTCAACTCTGTCATGAATCCGAAGCCTAGCTCGTGGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000475579.1
ENST00000479238.1
ENST00000485352.1
CDS TCA 72 bp ATACTGCCATGGACCTCTGAGGCACTGGTGTGGAACTaGCGGCAGGGTGGAGGTTCATATGATTCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: ILPWTSEALVWN*RQGGGSYDSEA
Trigger: AGCCTCTGAATCATATGAACCTCCACCCTGCCGTCAGTTCCACACCAGTGCCTCAGAGGTCCATGGCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
ENST00000479238.1
CDS CAA 90 bp GCCACAGGCCCACACAGTCTAGGCCTACTCGAATATCTGCCTGAGTaGCCTTTCCTGAAGTCAGTTCTGCCAGGAAGGTATCAGTTGTGG +
Preference number: 6 (lower is better)
Translates to: ATGPHSLGLLEYLPE*PFLKSVLPGRYQLW
Trigger: CCACAACTGATACCTTCCTGGCAGAACTGACTTCAGGAAAGGCAACTCAGGCAGATATTCGAGTAGGCCTAGACTGTGTGGGCCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS GCA 72 bp GTGTTGGTGATTCATCACGAGATTTGGCTGGGATACTaGCATGGACCTCTGAGGCACTGGTGTGGAACTGAC +
Preference number: 6 (lower is better)
Translates to: VLVIHHEIWLGY*HGPLRHWCGTD
Trigger: GTCAGTTCCACACCAGTGCCTCAGAGGTCCATGGCAGTATCCCAGCCAAATCTCGTGATGAATCACCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360632.8
ENST00000465804.5
ENST00000467467.5
ENST00000472417.1
CDS CAA 90 bp CCAGGAAGCAGATGCCAAGATAAGAGTCAGATGAGCAGAGATGTATaGGGGAAAATGCTGCCCAAGAGCTTCCTCTCTCCAGTCACCGGA +
Preference number: 6 (lower is better)
Translates to: PGSRCQDKSQMSRDV*GKMLPKSFLSPVTG
Trigger: TCCGGTGACTGGAGAGAGGAAGCTCTTGGGCAGCATTTTCCCCAATACATCTCTGCTCATCTGACTCTTATCTTGGCATCTGCTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475579.1
CDS CCA 72 bp GGAGTCTCTGGTGTTGTAGAGGAGTGTGTCATAAAGTaGGAGCCTGGATTTCAGAGTCCATCTGGAGCACAC +
Preference number: 6 (lower is better)
Translates to: GVSGVVEECVIK*EPGFQSPSGAH
Trigger: GTGTGCTCCAGATGGACTCTGAAATCCAGGCTCCCACTTTATGACACACTCCTCTACAACACCAGAGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS TCA 72 bp GCTGCGCTAACATGGTGTCAAGAGTGGCTCCCAGGCTaGATGCAACAAGTAAGAGTGAGCTATTGCTCACAA +
Preference number: 6 (lower is better)
Translates to: AALTWCQEWLPG*MQQVRVSYCSQ
Trigger: TTGTGAGCAATAGCTCACTCTTACTTGTTGCATTCAGCCTGGGAGCCACTCTTGACACCATGTTAGCGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472417.1
CDS TCA 72 bp AGAATGACCACTGCATTTCTGAGACTGCAAGGCTGTTaGTTCTGTTTTGTTGTGAGACTGGCCACAGGCCCA +
Preference number: 6 (lower is better)
Translates to: RMTTAFLRLQGC*FCFVVRLATGP
Trigger: TGGGCCTGTGGCCAGTCTCACAACAAAACAGAATCAACAGCCTTGCAGTCTCAGAAATGCAGTGGTCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CAA 90 bp AGGCTGGAGTACAAGAGGGAGCCTTTCTTAAGTGAGCAGTTCTCATaGCTCCAAAACAACTCTGAGAAGAAAGCCCAAATTCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: RLEYKREPFLSEQFS*LQNNSEKKAQIPGS
Trigger: AGAGCCAGGAATTTGGGCTTTCTTCTCAGAGTTGTTTTGGAGCAATGAGAACTGCTCACTTAAGAAAGGCTCCCTCTTGTACTCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472417.1
CDS TCA 72 bp ATCCACCAGGAAGCAGATGCCAAGATAAGAGTCAGATaGGCAGAGATGTATTGGGGAAAATGCTGCCCAAGA +
Preference number: 6 (lower is better)
Translates to: IHQEADAKIRVR*AEMYWGKCCPR
Trigger: TCTTGGGCAGCATTTTCCCCAATACATCTCTGCTCATCTGACTCTTATCTTGGCATCTGCTTCCTGGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475579.1
CDS GCA 72 bp GGCTTATGGGTCAGTTCAGATCCACCAGGAAGCAGATaGCAAGATAAGAGTCAGATGAGCAGAGATGTATTG +
Preference number: 6 (lower is better)
Translates to: GLWVSSDPPGSR*QDKSQMSRDVL
Trigger: CAATACATCTCTGCTCATCTGACTCTTATCTTGGCATCTGCTTCCTGGTGGATCTGAACTGACCCATAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465804.5
ENST00000475579.1
CDS GCA 72 bp TCTAGGTGGGAAGATAGGTTCCTCTTTTTCCTCCTCTaGCATCTTCTAGGAATTCTCTCTGGGGCTCCTTAT +
Preference number: 6 (lower is better)
Translates to: SRWEDRFLFFLL*HLLGILSGAPY
Trigger: ATAAGGAGCCCCAGAGAGAATTCCTAGAAGATGGCAGAGGAGGAAAAAGAGGAACCTATCTTCCCACCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CCA 72 bp TGTCATAAAGTGGGAGCCTGGATTTCAGAGTCCATCTaGAGCACACATGTTGTTTACATCTTCCGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: CHKVGAWISESI*STHVVYIFRLW
Trigger: CCAGAGACGGAAGATGTAAACAACATGTGTGCTCCAGATGGACTCTGAAATCCAGGCTCCCACTTTATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CCA 72 bp TGGTGTTGTAGAGGAGTGTGTCATAAAGTGGGAGCCTaGATTTCAGAGTCCATCTGGAGCACACATGTTGTT +
Preference number: 6 (lower is better)
Translates to: WCCRGVCHKVGA*ISESIWSTHVV
Trigger: AACAACATGTGTGCTCCAGATGGACTCTGAAATCCAGGCTCCCACTTTATGACACACTCCTCTACAACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CAA 72 bp AGATGCCAAGATAAGAGTCAGATGAGCAGAGATGTATaGGGGAAAATGCTGCCCAAGAGCTTCCTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: RCQDKSQMSRDV*GKMLPKSFLSP
Trigger: TGGAGAGAGGAAGCTCTTGGGCAGCATTTTCCCCAATACATCTCTGCTCATCTGACTCTTATCTTGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475579.1
CDS TCA 72 bp CACTCTGAGGTTTCTCTCTTGAGAGTCGCCAGGATGTaGGCTGAAATGAGTCAATATAAGGCCTTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: HSEVSLLRVARM*AEMSQYKALCL
Trigger: CAAACACAAGGCCTTATATTGACTCATTTCAGCTCACATCCTGGCGACTCTCAAGAGAGAAACCTCAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465804.5
ENST00000474080.1
CDS TCA 72 bp CATGTTGTTTACATCTTCCGTCTCTGGTGGGTGTGTTaGACCACACCATCAGGAAAGCCACTAATTATCAGG +
Preference number: 6 (lower is better)
Translates to: HVVYIFRLWWVC*TTPSGKPLIIR
Trigger: CCTGATAATTAGTGGCTTTCCTGATGGTGTGGTTCAACACACCCACCAGAGACGGAAGATGTAAACAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CCA 72 bp TTCATCTTCTGGAAAATCACTAGTAAGCGTGGCTTATaGGTCAGTTCAGATCCACCAGGAAGCAGATGCCAA +
Preference number: 6 (lower is better)
Translates to: FIFWKITSKRGL*VSSDPPGSRCQ
Trigger: TTGGCATCTGCTTCCTGGTGGATCTGAACTGACCCATAAGCCACGCTTACTAGTGATTTTCCAGAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465804.5
ENST00000475579.1
CDS CCA 72 bp AGTGTTATGAATGTTGTCTGTCTCAGAATGGCAGGCTaGCTCAATGCAGAGATTCTGGGTTTTGGAGAAAAA +
Preference number: 6 (lower is better)
Translates to: SVMNVVCLRMAG*LNAEILGFGEK
Trigger: TTTTTCTCCAAAACCCAGAATCTCTGCATTGAGCCAGCCTGCCATTCTGAGACAGACAACATTCATAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CAA 90 bp TCTGTCTCAGAATGGCAGGCTGGCTCAATGCAGAGATTCTGGGTTTaGGAGAAAAATTCTACAAATCTTGCTTTTAAATCCCAGTTCAGT +
Preference number: 6 (lower is better)
Translates to: SVSEWQAGSMQRFWV*EKNSTNLAFKSQFS
Trigger: ACTGAACTGGGATTTAAAAGCAAGATTTGTAGAATTTTTCTCCAAAACCCAGAATCTCTGCATTGAGCCAGCCTGCCATTCTGAGACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CAA 72 bp GAATGGCAGGCTGGCTCAATGCAGAGATTCTGGGTTTaGGAGAAAAATTCTACAAATCTTGCTTTTAAATCC +
Preference number: 6 (lower is better)
Translates to: EWQAGSMQRFWV*EKNSTNLAFKS
Trigger: GGATTTAAAAGCAAGATTTGTAGAATTTTTCTCCAAAACCCAGAATCTCTGCATTGAGCCAGCCTGCCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS GCA 72 bp ATTTTAGTTTTGACTATTGCTTACCAGAATGACCACTaGATTTCTGAGACTGCAAGGCTGTTGATTCTGTTT +
Preference number: 6 (lower is better)
Translates to: ILVLTIAYQNDH*ISETARLLILF
Trigger: AAACAGAATCAACAGCCTTGCAGTCTCAGAAATGCAGTGGTCATTCTGGTAAGCAATAGTCAAAACTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS CCA 72 bp ATTAGACAGATTCTACTGGTAAAATTATTATCTAGGTaGGAAGATAGGTTCCTCTTTTTCCTCCTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: IRQILLVKLLSR*EDRFLFFLLCH
Trigger: ATGGCAGAGGAGGAAAAAGAGGAACCTATCTTCCCACCTAGATAATAATTTTACCAGTAGAATCTGTCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474080.1
CDS TCA 72 bp GGAAAAGTTTGCCATATACTAGCAAGAATAAGCATATaGTTCCTCTTGGTATGTATGAAATGTGCCCTACAT +
Preference number: 6 (lower is better)
Translates to: GKVCHILARISI*FLLVCMKCALH
Trigger: ATGTAGGGCACATTTCATACATACCAAGAGGAATCATATGCTTATTCTTGCTAGTATATGGCAAACTTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474080.1