RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WWP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198373

Ensembl transcript IDs: ENST00000356003.6, ENST00000359154.7, ENST00000544162.5, ENST00000561780.5, ENST00000563618.5, ENST00000563659.5, ENST00000566463.5, ENST00000567161.1, ENST00000567303.1, ENST00000567579.5, ENST00000567986.5, ENST00000568185.1, ENST00000568684.1, ENST00000568818.1, ENST00000568845.5, ENST00000569174.5, ENST00000569297.5, ENST00000569620.5, ENST00000569658.1, ENST00000570104.1

Found 1018 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGACGAGGTCCCTGCCAGGCTGTGCCGCCGGGTCAGGCCTGCCTaGGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGT +
Preference number: 1 (lower is better)
Translates to: GDEVPARLCRRVRPA*AHGTARWVPERRGC
Trigger: ACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTGGCAGGGACCTCGTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp CACAGGGCCACATCCACGGGGGCCTCCCAAGGGCTGCGGGGCCAGTaGCCTCTCAGGCAGGGAGGACTCAGGACTACATGTGCGCTGGGG +
Preference number: 1 (lower is better)
Translates to: HRATSTGASQGLRGQ*PLRQGGLRTTCALG
Trigger: CCCCAGCGCACATGTAGTCCTGAGTCCTCCCTGCCTGAGAGGCCACTGGCCCCGCAGCCCTTGGGAGGCCCCCGTGGATGTGGCCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp AGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATaGAGACTGTGCTTGGAAGGCACCCGGGACCAGTCCAAGGGGCTG +
Preference number: 1 (lower is better)
Translates to: RLHLPGRGKVENLGA*RLCLEGTRDQSKGL
Trigger: CAGCCCCTTGGACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 90 bp CCGCGGGTCGGGGGAACTGCAGGGCCTCCTGGGATCAGGCTTTTCTaGCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCC +
Preference number: 1 (lower is better)
Translates to: PRVGGTAGPPGIRLF*QQRDDSVVPHRATS
Trigger: GGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAAAAGCCTGATCCCAGGAGGCCCTGCAGTTCCCCCGACCCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 90 bp GTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGCAACACCTTCCCTTGCACACTCACA +
Preference number: 1 (lower is better)
Translates to: VASLLAELVQEVSGL*GSPWGCNTFPCTLT
Trigger: TGTGAGTGTGCAAGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 90 bp CCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTTCCTaGGAGGCGTGGCTGTTTGGGAAACTCTTGGACCCAAAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: PGQACLSSRNRQVGS*EAWLFGKLLDPKVW
Trigger: CCAGACCTTTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 90 bp GCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTaGACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGA +
Preference number: 1 (lower is better)
Translates to: AKPLKSAHTTEADAG*TSRAGGRSRIWEHG
Trigger: TCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp ACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGG +
Preference number: 1 (lower is better)
Translates to: TARWVPERRGCLGNS*TQRSGSLKVSEHLG
Trigger: CCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp GAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTaGGAAACTCTTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAG +
Preference number: 1 (lower is better)
Translates to: ELTEPPGGFLRGVAV*ETLGPKGLGPSRSQ
Trigger: CTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 90 bp GATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTaGAGAAATCAGATGGGGCTATGCAGCAGCTCAGGGCCTTTCTGC +
Preference number: 1 (lower is better)
Translates to: DSSYGRVPVLEAGGN*RNQMGLCSSSGPFC
Trigger: GCAGAAAGGCCCTGAGCTGCTGCATAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 90 bp GGACCAGAAGATGAGGTGGGATGTGTGTGGCACACGCCTGACAGCTaGACCAAACAGGGCACACGGGCTCTCCTAAGAGTCCCTACTTCC +
Preference number: 1 (lower is better)
Translates to: GPEDEVGCVWHTPDS*TKQGTRALLRVPTS
Trigger: GGAAGTAGGGACTCTTAGGAGAGCCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCTCATCTTCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR GCA 90 bp GCAGCTTGCACCCTGACCCACCCTGGAGCGGCTTCCATGGTAACGTaGCACAGGGAAGTACAGCAAATGACTGAAAGGGACAGAAGAGGC +
Preference number: 1 (lower is better)
Translates to: AACTLTHPGAASMVT*HREVQQMTERDRRG
Trigger: GCCTCTTCTGTCCCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCCAGGGTGGGTCAGGGTGCAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp TCTCCATCATCAGAGAGGCTCAATTACAGGCAGAACCTCCTTTGCTaGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAG +
Preference number: 1 (lower is better)
Translates to: SPSSERLNYRQNLLC*QRPLALSVPNSHPQ
Trigger: CTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTGTAATTGAGCCTCTCTGATGATGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp CTGATGCTTCCAAACCTCACCAGCAGCTTGCACCCTGACCCACCCTaGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAAT +
Preference number: 1 (lower is better)
Translates to: LMLPNLTSSLHPDPP*SGFHGNVPQGSTAN
Trigger: ATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGTTTGGAAGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 90 bp TCATCTCCATCATCAGAGAGGCTCAATTACAGGCAGAACCTCCTTTaGTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCC +
Preference number: 1 (lower is better)
Translates to: SSPSSERLNYRQNLL*WQRPLALSVPNSHP
Trigger: GGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTGTAATTGAGCCTCTCTGATGATGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp GGAGAGTTTTGCAGAGAGGGTCAGCCCTCTGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCG +
Preference number: 1 (lower is better)
Translates to: GEFCREGQPSGTLQR*GQRQLGGFIPDCHP
Trigger: CGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCTCTGCAAAACTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp TGTGCAGATAAAGCCTCACACCTATGCAGAATGAACACTTTCCGCTaGCGGGCTGCACTCCATTCTGAACAGGGGACCAACAGGCCCTCC +
Preference number: 1 (lower is better)
Translates to: CADKASHLCRMNTFR*RAALHSEQGTNRPS
Trigger: GGAGGGCCTGTTGGTCCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTTATCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 90 bp AGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTaGAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCA +
Preference number: 1 (lower is better)
Translates to: SGFHGNVPQGSTAND*KGQKRLRCGKLSHS
Trigger: TGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp ACTCTTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTaGGGTGCCAGCTCCTGGACAGAAAGTGACAGCAGCGTAACAAAA +
Preference number: 1 (lower is better)
Translates to: TLGPKGLGPSRSQNT*GASSWTESDSSVTK
Trigger: TTTTGTTACGCTGCTGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 90 bp GTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAATaGACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGA +
Preference number: 1 (lower is better)
Translates to: VFMSCVQIKPHTYAE*TLSAGGLHSILNRG
Trigger: TCCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 90 bp CACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATaGACACCCGTGAGCCTGATGCTTCCAAACCTCACCAGCAGCTTG +
Preference number: 1 (lower is better)
Translates to: HFSYIHVRTHTHEHT*TPVSLMLPNLTSSL
Trigger: CAAGCTGCTGGTGAGGTTTGGAAGCATCAGGCTCACGGGTGTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 90 bp ACTTCCGACAGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTaGATATTTTATACAGGAGCCCTTCATGGCTACTTTACTGGGAGG +
Preference number: 1 (lower is better)
Translates to: TSDSLSLHKLRAGEV*IFYTGALHGYFTGR
Trigger: CCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCTGTCGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CCA 90 bp CGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGACCAGCCCATaGCTAGCAAAGGGCATTCCGTACAGACACTTCAGTTATATACAC +
Preference number: 1 (lower is better)
Translates to: RGKGRALQNNLVTSP*LAKGIPYRHFSYIH
Trigger: GTGTATATAACTGAAGTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp TGTGCTATGCTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTaGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTCTCAGT +
Preference number: 1 (lower is better)
Translates to: CAMLPPQKGTVSRSH*VTHGVSSRVSGLLS
Trigger: ACTGAGAAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAGCATAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CCA 90 bp TTCCCTCTCTTGGAAGCCTCTCTCATCCTTTGGTTTTGGATAACTTaGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCC +
Preference number: 1 (lower is better)
Translates to: FPLLEASLILWFWIT*RHSHEALPNKKHSA
Trigger: GGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGAGAGGCTTCCAAGAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR TCA 90 bp CTATGCTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTGGGTaGCTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTCTCAGTTGAT +
Preference number: 1 (lower is better)
Translates to: LCYLRRKGPFQEAIG*LMVSVPESQVFSVD
Trigger: ATCAACTGAGAAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR GCA 90 bp TCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATaGAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAA +
Preference number: 1 (lower is better)
Translates to: SAGFHVLCADKASHL*RMNTFRWRAALHSE
Trigger: TTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 90 bp TACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTGATTCTTTCTTaGAGCAGAATACATCCCCTTTTGAAAGCTCTCGGGACCAGGAGA +
Preference number: 1 (lower is better)
Translates to: YRSPSWLLYWEVILS*SRIHPLLKALGTRR
Trigger: TCTCCTGGTCCCGAGAGCTTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CCA 90 bp AGGCTGGGCATAGGGTACGGCGGAATGCATCAACACTCTAAATCTTaGCCTCCCATGCGCCTTTTGTTTCCCAGAGATCTTCTAATAATT +
Preference number: 1 (lower is better)
Translates to: RLGIGYGGMHQHSKS*PPMRLLFPRDLLII
Trigger: AATTATTAGAAGATCTCTGGGAAACAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCCTATGCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR TCA 90 bp CAACCCTACAACACAACCACTTCAAGTTTATACATGGACAAAGTCTaGGGGAGTTTGCTGTTTTTGTCCCGTGGATACCCAGGCAGCTTA +
Preference number: 1 (lower is better)
Translates to: QPYNTTTSSLYMDKV*GSLLFLSRGYPGSL
Trigger: TAAGCTGCCTGGGTATCCACGGGACAAAAACAGCAAACTCCCTCAGACTTTGTCCATGTATAAACTTGAAGTGGTTGTGTTGTAGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGGAGGCAGGCAGAGATaGCCTCGCCCCAGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGGGRQR*PRPRAR
Trigger: GCGGGCCCTGGGGCGAGGCCATCTCTGCCTGCCTCC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGGGCCTCCCAAGGGCTaGGGGGCCAGTGGCCTCTCA +
Preference number: 2 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGGPPKG*GASGLS
Trigger: TGAGAGGCCACTGGCCCCGCAGCCCTTGGGAGGCCC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGC +
Preference number: 2 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGEVSGL*GSPWGC
Trigger: GCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGTCCCTGCCAGGCTGTaGCGCCGGGTCAGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRVPARL*RRVRPA
Trigger: GGCAGGCCTGACCCGGCGGCACAGCCTGGCAGGGAC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGGAGGCAGGCAGAGATaGCCTCGCCCCAGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRGGRQR*PRPRAR
Trigger: GCGGGCCCTGGGGCGAGGCCATCTCTGCCTGCCTCC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGGAGGCAGGCAGAGATaGCCTCGCCCCAGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEGGRQR*PRPRAR
Trigger: GCGGGCCCTGGGGCGAGGCCATCTCTGCCTGCCTCC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCGCGGGTCGGGGGAACTaGAGGGCCTCCTGGGATCAG +
Preference number: 2 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGAGRGN*RASWDQ
Trigger: CTGATCCCAGGAGGCCCTGCAGTTCCCCCGACCCGC...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTTGGGGTGCCAGCTCCTaGACAGAAAGTGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGWGASS*TESDSS
Trigger: GCTGCTGTCACTTTCTGTCCAGGAGCTGGCACCCCA...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGCTGCCAGCAGCGAGATaGCAGTGTGGTCCCACACAG +
Preference number: 2 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRLPAAR*QCGPTQ
Trigger: CTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAG...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGGCTGCACTCCATTCTaGACAGGGGACCAACAGGCC +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRGCTPF*TGDQQA
Trigger: GGCCTGTTGGTCCCCTGTTCAGAATGGAGTGCAGCC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGATCATTCTGCCAGGCTTaGGGACGAGGTCCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRSFCQA*GRGPCQ
Trigger: CTGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGA...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGCTGCCAGCAGCGAGATaGCAGTGTGGTCCCACACAG +
Preference number: 2 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQLPAAR*QCGPTQ
Trigger: CTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAG...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGGCTTTATTCCAGACTaGCATCCGCGGGTCGGGGGA +
Preference number: 2 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQGFIPD*HPRVGG
Trigger: TCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGC +
Preference number: 2 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAEVSGL*GSPWGC
Trigger: GCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTTTGGACCCAAAGGTCTaGGTCCCTCAAGGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGLDPKV*VPQGLR
Trigger: TCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACACACCTATGCAGAATaGACACTTTCCGCTGGCGGG +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRHTYAE*TLSAGG
Trigger: CCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGTCCCTGCCAGGCTGTaGCGCCGGGTCAGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPVPARL*RRVRPA
Trigger: GGCAGGCCTGACCCGGCGGCACAGCCTGGCAGGGAC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCTGGGGACGAGGTCCCTaGCAGGCTGTGCCGCCGGGT +
Preference number: 2 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCWGRGP*QAVPPG
Trigger: ACCCGGCGGCACAGCCTGGCAGGGACCTCGTCCCCA...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAACTCTGCGGCAGCCCCTaGGGATGCAACACCTTCCCT +
Preference number: 2 (lower is better)
Translates to: PELTEPPGGFLRGVAVWELCGSP*GCNTFP
Trigger: AGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAG...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGAGGCAGACGCAGGCTaGACCTCCCGGGCCGGGGGA +
Preference number: 2 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTEADAG*TSRAGG
Trigger: TCCCCCGGCCCGGGAGGTGCAGCCTGCGTCTGCCTC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGGACTACATGTGCGCTaGGGGGCGTGGGAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGGLHVR*GAWEGR
Trigger: CCGCCCCTCCCACGCCCCCCAGCGCACATGTAGTCC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGG +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRGTLQR*GQRQLG
Trigger: CCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACGGGTCAGGCCTGCCTaGGCTCACGGAACCGCCAGG +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSARVRPA*AHGTAR
Trigger: CCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGGGCCTCCCAAGGGCTaGGGGGCCAGTGGCCTCTCA +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAGPPKG*GASGLS
Trigger: TGAGAGGCCACTGGCCCCGCAGCCCTTGGGAGGCCC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGCGGGTCGGGGGAACTaGAGGGCCTCCTGGGATCAG +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPAGRGN*RASWDQ
Trigger: CTGATCCCAGGAGGCCCTGCAGTTCCCCCGACCCGC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGC +
Preference number: 2 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAEVSGL*GSPWGC
Trigger: GCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGTGGGGACGAGGTCCCTaGCAGGCTGTGCCGCCGGGT +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERWGRGP*QAVPPG
Trigger: ACCCGGCGGCACAGCCTGGCAGGGACCTCGTCCCCA...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAAGCTCAGGGCCTTTCTaGTGGTTTTCATGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRSSGPF*WFSCPV
Trigger: CACAGGACATGAAAACCAGCAGAAAGGCCCTGAGCT...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGGACTACATGTGCGCTaGGGGGCGTGGGAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAGLHVR*GAWEGR
Trigger: CCGCCCCTCCCACGCCCCCCAGCGCACATGTAGTCC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGGACTACATGTGCGCTaGGGGGCGTGGGAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERGLHVR*GAWEGR
Trigger: CCGCCCCTCCCACGCCCCCCAGCGCACATGTAGTCC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCAGAGGGTCAGCCCTCTaGAACTTTGCAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGRGSAL*NFAKVG
Trigger: CCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCT...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAACACATACACCCAGGGTaGGGTCTAGAGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEHIHPG*GLEDRG
Trigger: TCCCCTGTCCTCTAGACCCCACCCTGGGTGTATGTG...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGCTGGCAAAGACCCTTaGCGCTCTCAGTCCCGAACA +
Preference number: 2 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEAGKDP*RSQSRT
Trigger: TGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCTCAGCCTCCACCGCTaGCGCCTGCTAGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPLSLHR*RLLGRQ
Trigger: CTGCCTCCCTAGCAGGCGCCAGCGGTGGAGGCTGAG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACCTGTGTCCCGCCACTaGGGACTGCCTGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTPVSRH*GLPGGP
Trigger: GGGTCCCCCAGGCAGTCCCCAGTGGCGGGACACAGG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTTGGAGCTCCAGGGGCTaGCAGGGGAGCTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPWSSRG*QGSSTA
Trigger: GGCTGTGGAGCTCCCCTGCCAGCCCCTGGAGCTCCA...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGTCCCTGCCAGGCTGTaGCGCCGGGTCAGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: GLSAGFHVLCADKASHLCVPARL*RRVRPA
Trigger: GGCAGGCCTGACCCGGCGGCACAGCCTGGCAGGGAC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCCTCTGCGGCAGCCCCTaGGGATGCAACACCTTCCCT +
Preference number: 2 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCLCGSP*GCNTFP
Trigger: AGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAG...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACTCAGCCTCCACCGCTaGCGCCTGCTAGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTLSLHR*RLLGRQ
Trigger: CTGCCTCCCTAGCAGGCGCCAGCGGTGGAGGCTGAG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCACGGAACCGCCAGGTaGGTTCCTGAGAGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGHGTAR*VPERRG
Trigger: GCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCATGGAGCTCCAGGGGCTaGCAGGGGAGCTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAWSSRG*QGSSTA
Trigger: GGCTGTGGAGCTCCCCTGCCAGCCCCTGGAGCTCCA...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CAA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATaGAAGGCGGCAAGGCTAGGAGTGGCGCTCGGGACCTCAACCCCT +
Preference number: 2 (lower is better)
Translates to: GTAWGTLSSKGISSL*KAARLGVALGTSTP
Trigger: AGGGGTTGAGGTCCCGAGCGCCACTCCTAGCCTTGCCGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGCGCCAGGTGGGTTCCTaGGAGGCGTGGCTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERRQVGS*EAWLFG
Trigger: CCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCG...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGGGGCATGGTCACCTTaGAGATTTCAATATGACCTA +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRGAWSP*RFQYDL
Trigger: TAGGTCATATTGAAATCTTCAAGGTGACCATGCCCC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGGGCCTCCCAAGGGCTaGGGGGCCAGTGGCCTCTCA +
Preference number: 2 (lower is better)
Translates to: GLSAGFHVLCADKASHLCGPPKG*GASGLS
Trigger: TGAGAGGCCACTGGCCCCGCAGCCCTTGGGAGGCCC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGGCCGGCATGTGTCCTaGGACTCAGCCTCCACCGCT +
Preference number: 2 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTGRHVS*DSASTA
Trigger: AGCGGTGGAGGCTGAGTCGCAGGACACATGCCGGCC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGTCTGCCATGACTACTaGCCCAGCACCCCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAVCHDY*PSTPVG
Trigger: CCCCACCGGGGTGCTGGGGCAGTAGTCATGGCAGAC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCAGCGAGATGACAGTGTaGTCCCACACAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGSEMTV*SHTGPH
Trigger: ATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCT...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGCACGGAACCGCCAGGTaGGTTCCTGAGAGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERHGTAR*VPERRG
Trigger: GCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTG...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCTCAGGGCCTTTCTGCTaGTTTTCATGTCCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGSGPFC*FSCPVC
Trigger: GCACACAGGACATGAAAACCAGCAGAAAGGCCCTGA...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGGCTGCACTCCATTCTaGACAGGGGACCAACAGGCC +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPGCTPF*TGDQQA
Trigger: GGCCTGTTGGTCCCCTGTTCAGAATGGAGTGCAGCC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGGCTTTATTCCAGACTaGCATCCGCGGGTCGGGGGA +
Preference number: 2 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGGFIPD*HPRVGG
Trigger: TCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTAGCCCTCTGGAACTTTaGAAAGGTGGGGCCAAAGGC +
Preference number: 2 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPASPLEL*KGGAKG
Trigger: GCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCTCTGCGGCAGCCCCTaGGGATGCAACACCTTCCCT +
Preference number: 2 (lower is better)
Translates to: GTAWGTLSSKGISSLLKALCGSP*GCNTFP
Trigger: AGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGCTGGCAAAGACCCTTaGCGCTCTCAGTCCCGAACA +
Preference number: 2 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTAGKDP*RSQSRT
Trigger: TGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGCTGTTTTTGTCCCGTaGATACCCAGGCAGCTTAGA +
Preference number: 2 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEAVFVP*IPRQLR
Trigger: TCTAAGCTGCCTGGGTATCCACGGGACAAAAACAGC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCTGGGGTGCCAGCTCCTaGACAGAAAGTGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCWGASS*TESDSS
Trigger: GCTGCTGTCACTTTCTGTCCAGGAGCTGGCACCCCA...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGCCGGGAGTCTGCCATaGCTACTGCCCCAGCACCCC +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVAGSLP*LLPQHP
Trigger: GGGGTGCTGGGGCAGTAGTCATGGCAGACTCCCGGC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAGGCAGAACCTCCTTTaGTGGCAAAGACCCTTGGCG +
Preference number: 2 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTRQNLL*WQRPLA
Trigger: CGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCAAAGCCTCACACCTATaGAGAATGAACACTTTCCGC +
Preference number: 2 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGKASHL*RMNTFR
Trigger: GCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTT...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACATCATTCTGCCAGGCTTaGGGACGAGGTCCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSFCQA*GRGPCQ
Trigger: CTGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGA...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCCACTGGGGACTGCCTaGGGGACCCTATCTAGCAAA +
Preference number: 2 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGPLGTA*GTLSSK
Trigger: TTTGCTAGATAGGGTCCCCCAGGCAGTCCCCAGTGG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGTACAGGAGCCCTTCATaGCTACTTTACTGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGYRSPS*LLYWEV
Trigger: CACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTA...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGGCTTTATTCCAGACTaGCATCCGCGGGTCGGGGGA +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHGFIPD*HPRVGG
Trigger: TCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTAGCCCTCTGGAACTTTaGAAAGGTGGGGCCAAAGGC +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPSPLEL*KGGAKG
Trigger: GCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCT...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGACAGGGGAGAGTTTTaGAGAGAGGGTCAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPDRGEF*REGQPS
Trigger: AGAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGGCCGGCATGTGTCCTaGGACTCAGCCTCCACCGCT +
Preference number: 2 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAGRHVS*DSASTA
Trigger: AGCGGTGGAGGCTGAGTCGCAGGACACATGCCGGCC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAAAGTCTGAGGGAGTTTaGTGTTTTTGTCCCGTGGAT +
Preference number: 2 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEKSEGV*CFCPVD
Trigger: ATCCACGGGACAAAAACAGCAAACTCCCTCAGACTT...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACCGCCGGGTCAGGCCTaGCTGAGCTCACGGAACCGC +
Preference number: 2 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEPPGQA*LSSRNR
Trigger: GCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCAACCCCTCTCATTCTaGCAGGCTTGGGGACGAGGT +
Preference number: 2 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAQPLSF*QAWGRG
Trigger: ACCTCGTCCCCAAGCCTGGCAGAATGAGAGGGGTTG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGTCTGCCATGACTACTaGCCCAGCACCCCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVVCHDY*PSTPVG
Trigger: CCCCACCGGGGTGCTGGGGCAGTAGTCATGGCAGAC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGGAGCATGGAGACTGTaGTTGGAAGGCACCCGGGAC +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHGAWRL*LEGTRD
Trigger: GTCCCGGGTGCCTTCCAAGCACAGTCTCCATGCTCC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGCACATACACCCAGGGTaGGGTCTAGAGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERHIHPG*GLEDRG
Trigger: TCCCCTGTCCTCTAGACCCCACCCTGGGTGTATGTG...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAACAGCCACCCCCAGTaGCCAGTCTCCTCGCCGAAC +
Preference number: 2 (lower is better)
Translates to: GLSAGFHVLCADKASHLCNSHPQ*PVSSPN
Trigger: GTTCGGCGAGGAGACTGGCCACTGGGGGTGGCTGTT...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTTCAAGTTTATACATaGACAAAGTCTGAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRLQVYT*TKSEGV
Trigger: AACTCCCTCAGACTTTGTCCATGTATAAACTTGAAG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACATGGAGACTGTGCTTaGAAGGCACCCGGGACCAGT +
Preference number: 2 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTHGDCA*KAPGTS
Trigger: ACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACATGGAGACTGTGCTTaGAAGGCACCCGGGACCAGT +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAHGDCA*KAPGTS
Trigger: ACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CAA 90 bp TTCATCTCCATCATCAGAGAGGCTCAATTACAGGCAGAACCTCCTTaGCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCC +
Preference number: 2 (lower is better)
Translates to: FISIIREAQLQAEPP*LAKTLGALSPEQPP
Trigger: GGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTGTAATTGAGCCTCTCTGATGATGGAGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACCGCCAGGTGGGTTCCTaGGAGGCGTGGCTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNRQVGS*EAWLFG
Trigger: CCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCG...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp AAACAGGGCACACGGGCTCTCCTAAGAGTCCCTACTTCCGACAGCCTTTCCCTCCAAACCCCTTCTCCTTaGACTTGGACAGTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: KQGTRALLRVPTSDSLSLQTPSP*TWTVFP
Trigger: AGGGAAGACTGTCCAAGTTCAAGGAGAAGGGGTTTG...GAGGGAAAGGCTGTCGGAAGTAGGGACTCTTAGGAGAGCCCGTGTGCCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGACAGGGGAGAGTTTTaGAGAGAGGGTCAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERDRGEF*REGQPS
Trigger: AGAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGAGGCAGAACCTCCTTTaGTGGCAAAGACCCTTGGCG +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERRQNLL*WQRPLA
Trigger: CGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCT...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGAGGCTGGCGGGAACTaGAGAAATCAGATGGGGCTA +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTEREAGGN*RNQMGL
Trigger: TAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGAGAGGGTCAGCCCTCTaGAACTTTGCAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERRGSAL*NFAKVG
Trigger: CCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCT...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGAACAGCCACCCCCAGTaGCCAGTCTCCTCGCCGAAC +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVNSHPQ*PVSSPN
Trigger: GTTCGGCGAGGAGACTGGCCACTGGGGGTGGCTGTT...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACAGAACCTCCTTTGCTaGCAAAGACCCTTGGCGCTC +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAQNLLC*QRPLAL
Trigger: GAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCTCAGGGCCTTTCTGCTaGTTTTCATGTCCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCSGPFC*FSCPVC
Trigger: GCACACAGGACATGAAAACCAGCAGAAAGGCCCTGA...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGCAGAGTCCCCGTGTTaGAGGCTGGCGGGAACTGCA +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVAESPC*RLAGTA
Trigger: TGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGGGATCAGGCTTTTCTaGCAGCAGCGAGATGACAGT +
Preference number: 2 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAGIRLF*QQRDDS
Trigger: ACTGTCATCTCGCTGCTGGCAGAAAAGCCTGATCCC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAGGCAGAACCTCCTTTaGTGGCAAAGACCCTTGGCG +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHRQNLL*WQRPLA
Trigger: CGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCCAACCCCTCTCATTCTaGCAGGCTTGGGGACGAGGT +
Preference number: 2 (lower is better)
Translates to: GLSAGFHVLCADKASHLCQPLSF*QAWGRG
Trigger: ACCTCGTCCCCAAGCCTGGCAGAATGAGAGGGGTTG...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAAATCAGATGGGGCTATaGAGCAGCTCAGGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSANQMGL*SSSGPF
Trigger: GAAAGGCCCTGAGCTGCTGCATAGCCCCATCTGATT...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGG +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERGTLQR*GQRQLG
Trigger: CCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCAGAACCTCCTTTGCTaGCAAAGACCCTTGGCGCTC +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHQNLLC*QRPLAL
Trigger: GAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGTGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGCLGNS*TQRSGS
Trigger: GGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACA...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACACGGAACCGCCAGGTaGGTTCCTGAGAGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEHGTAR*VPERRG
Trigger: GCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTACTGCAGAAATCAGATaGGGCTATGCAGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPTAEIR*GYAAAQ
Trigger: CTGAGCTGCTGCATAGCCCCATCTGATTTCTGCAGT...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CAA 90 bp TTCAATATGACCTATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTaGGAGGCTGGCGGGAACTGCAGAAATCAGATGGGGCTATGCAGC +
Preference number: 2 (lower is better)
Translates to: FNMTYEDSSYGRVPV*EAGGNCRNQMGLCS
Trigger: GCTGCATAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATAGGTCATATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CAA 90 bp CTGTGCTATGCTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATaGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: LCYATSAERDRFKKP*GDSWCQFQSLRSSQ
Trigger: CTGAGAAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAGCATAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR TCA 90 bp GGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGCAAGAAGCCATTGGGTaGCTCATGGTGTCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: GYGGMHQHSKSWPPMRLLQEAIG*LMVSVP
Trigger: TGGAACTGACACCATGAGTCACCCAATGGCTTCTTG...CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR GCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACAACCCCTCTCATTCTaGCAGGCTTGGGGACGAGGT +
Preference number: 2 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAQPLSF*QAWGRG
Trigger: ACCTCGTCCCCAAGCCTGGCAGAATGAGAGGGGTTG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAGCTCAGGGCCTTTCTaGTGGTTTTCATGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSSGPF*WFSCPV
Trigger: CACAGGACATGAAAACCAGCAGAAAGGCCCTGAGCT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAGGGTCAGCCCTCTaGAACTTTGCAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GLSAGFHVLCADKASHLCRGSAL*NFAKVG
Trigger: CCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCT...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGCACATACACCCAGGGTaGGGTCTAGAGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVHIHPG*GLEDRG
Trigger: TCCCCTGTCCTCTAGACCCCACCCTGGGTGTATGTG...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACTTGGACCCAAAGGTCTaGGTCCCTCAAGGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHLDPKV*VPQGLR
Trigger: TCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGTGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: GAASMVTCHREVQQMTERCLGNS*TQRSGS
Trigger: GGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACA...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GAAGCCCTGCCGAATAAGAAGCACTCTGCCTTTAGGGACAGGCTGGGCATAGGGGTTTCAAGAAGCCATTaGGTGACTCATGGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: EALPNKKHSAFRDRLGIGVSRSH*VTHGVS
Trigger: ACTGACACCATGAGTCACCCAATGGCTTCTTGAAAC...CCCTATGCCCAGCCTGTCCCTAAAGGCAGAGTGCTTCTTATTCGGCAGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR TCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACTGCCAGCAGCGAGATaGCAGTGTGGTCCCACACAG +
Preference number: 2 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAELPAAR*QCGPTQ
Trigger: CTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGACGCACGAACACACATaGACACCCGTGAGCCTGATG +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVTHEHT*TPVSLM
Trigger: CATCAGGCTCACGGGTGTTCATGTGTGTTCGTGCGT...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAGAGGCGTGGCTGTTTaGGAAACTCTTGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHRGVAV*ETLGPK
Trigger: TTTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATGAACACTTTCCGCTaGCGGGCTGCACTCCATTCT +
Preference number: 2 (lower is better)
Translates to: GLSAGFHVLCADKASHLCMNTFR*RAALHS
Trigger: AGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCAT...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GAGACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTCCATTGGGTGACTCATaGTGTCAGTTCCAGAGTCTC +
Preference number: 2 (lower is better)
Translates to: ETHVERTFCPWQTGNQTPPLGDS*CQFQSL
Trigger: GAGACTCTGGAACTGACACCATGAGTCACCCAATGG...AGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CCA 90 bp ACCAAACAGGGCACACGGGCTCTCCTAAGAGTCCCTACTTCCGACAGCCTTTCCCTCATCCTTTGGTTTTaGATAACTTGGCGGCATTCT +
Preference number: 2 (lower is better)
Translates to: TKQGTRALLRVPTSDSLSLILWF*ITWRHS
Trigger: AGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAG...GGAAAGGCTGTCGGAAGTAGGGACTCTTAGGAGAGCCCGTGTGCCCTGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CAA 90 bp CTGTTTTTGTCCCGTGGATACCCAGGCAGCTTAGACAAACCTTCATaGGCTGAGAATGAATTAACTGGCCGGCATGTGTCCTGCGACTCA +
Preference number: 2 (lower is better)
Translates to: LFLSRGYPGSLDKPS*AENELTGRHVSCDS
Trigger: TGAGTCGCAGGACACATGCCGGCCAGTTAATTCATTCTCAGCCAATGAAGGTTTGTCTAAGCTGCCTGGGTATCCACGGGACAAAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGG +
Preference number: 2 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAGTLQR*GQRQLG
Trigger: CCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGTTGGACCCAAAGGTCTaGGTCCCTCAAGGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVLDPKV*VPQGLR
Trigger: TCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCTGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: GLSAGFHVLCADKASHLCCLGNS*TQRSGS
Trigger: GGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACA...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAATGAACACTTTCCGCTaGCGGGCTGCACTCCATTCT +
Preference number: 2 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAMNTFR*RAALHS
Trigger: AGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCAT...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CAA 90 bp ATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTGATTCTTTCTaGGAGCAGAATACATCCCCTTTTGAAAGCTCTCGGGACCAGGAG +
Preference number: 2 (lower is better)
Translates to: IQEPFMATLLGGDSF*EQNTSPFESSRDQE
Trigger: CTCCTGGTCCCGAGAGCTTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR GCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGGATCAGGCTTTTCTaGCAGCAGCGAGATGACAGT +
Preference number: 2 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGIRLF*QQRDDS
Trigger: ACTGTCATCTCGCTGCTGGCAGAAAAGCCTGATCCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAAGCCCTCTGGAACTTTaGAAAGGTGGGGCCAAAGGC +
Preference number: 2 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAESPLEL*KGGAKG
Trigger: GCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCT...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAAGTCTGAGGGAGTTTaGTGTTTTTGTCCCGTGGAT +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHKSEGV*CFCPVD
Trigger: ATCCACGGGACAAAAACAGCAAACTCCCTCAGACTT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAAAGCCTCACACCTATaGAGAATGAACACTTTCCGC +
Preference number: 2 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHKASHL*RMNTFR
Trigger: GCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAAGCGAGATGACAGTGTaGTCCCACACAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAESEMTV*SHTGPH
Trigger: ATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCT...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCCTTCAAGTTTATACATaGACAAAGTCTGAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCLQVYT*TKSEGV
Trigger: AACTCCCTCAGACTTTGTCCATGTATAAACTTGAAG...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCATTTCAATATGACCTATaGAGATTCCAGTTACGGCAG +
Preference number: 2 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAFQYDL*RFQLRQ
Trigger: CTGCCGTAACTGGAATCTTCATAGGTCATATTGAAA...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGCTTCCATGGTAACGTaGCACAGGGAAGTACAGCAA +
Preference number: 2 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNASMVT*HREVQQ
Trigger: TTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGCTGTTTTTGTCCCGTaGATACCCAGGCAGCTTAGA +
Preference number: 2 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNAVFVP*IPRQLR
Trigger: TCTAAGCTGCCTGGGTATCCACGGGACAAAAACAGC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp AGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCTCTCTCATCCTTTaGTTTTGGATAACTTGGCGG +
Preference number: 2 (lower is better)
Translates to: SLSLHKLRAGEVCIFYTGASLIL*FWITWR
Trigger: CCGCCAAGTTATCCAAAACCAAAGGATGAGAGAGGC...TCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CCA 90 bp GGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTAGAACTTTCTGTCCCTaGCAGACAGGGAACCAAACC +
Preference number: 2 (lower is better)
Translates to: GKCAYFIQEPFMATLLGGRTFCP*QTGNQT
Trigger: GGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCT...ACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR TCA 90 bp TCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGGAAAAGCAATCAAGTaGCCCGGAATAAACGTCACT +
Preference number: 2 (lower is better)
Translates to: STNSGQGKCAYFIQEPFMGKAIK*PGINVT
Trigger: AGTGACGTTTATTCCGGGTCACTTGATTGCTTTTCC...CATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CAA 90 bp CTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTaGAAAGCTCTCGGGACCAGGAGACACATGTGGAAAGAACTTTCT +
Preference number: 2 (lower is better)
Translates to: LYWEVILSWSRIHPL*KALGTRRHMWKELS
Trigger: AGAAAGTTCTTTCCACATGTGTCTCCTGGTCCCGAGAGCTTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR TCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGTACATGGACAAAGTCTaGGGGAGTTTGCTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVYMDKV*GSLLFL
Trigger: CAAAAACAGCAAACTCCCTCAGACTTTGTCCATGTA...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR GCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACAAGTCTGAGGGAGTTTaGTGTTTTTGTCCCGTGGAT +
Preference number: 2 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNKSEGV*CFCPVD
Trigger: ATCCACGGGACAAAAACAGCAAACTCCCTCAGACTT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACTACATGGACAAAGTCTaGGGGAGTTTGCTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNYMDKV*GSLLFL
Trigger: CAAAAACAGCAAACTCCCTCAGACTTTGTCCATGTA...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACTTCAAGTTTATACATaGACAAAGTCTGAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYALQVYT*TKSEGV
Trigger: AACTCCCTCAGACTTTGTCCATGTATAAACTTGAAG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR TCA 90 bp ACAGCCAAAAACAATAAGTCAACAAATATGTGTGGCTGTGTTCCAATAAAACCTACTAGTTTGTACAGATaGAACAAAACCCGCCATGAG +
Preference number: 2 (lower is better)
Translates to: TAKNNKSTNMCGCVPIKPTSLYR*NKTRHE
Trigger: CTCATGGCGGGTTTTGTTTCATCTGTACAAACTAGT...AGGTTTTATTGGAACACAGCCACACATATTTGTTGACTTATTGTTTTTGGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CCA 72 bp TGGCCGGCATGTGTCCTGCGACTCAGCCTCCACCGCTaGCGCCTGCTAGGGAGGCAGGCAGAGATGGCCTCG +
Preference number: 3 (lower is better)
Translates to: WPACVLRLSLHR*RLLGRQAEMAS
Trigger: CGAGGCCATCTCTGCCTGCCTCCCTAGCAGGCGCCAGCGGTGGAGGCTGAGTCGCAGGACACATGCCGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp CTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGCAACACCTTCCCTTGC +
Preference number: 3 (lower is better)
Translates to: LLAELVQEVSGL*GSPWGCNTFPC
Trigger: GCAAGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCTGTTTGGGAAACTCTaGGACCCAAAGGTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGLFGKL*DPKVWV
Trigger: GACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACAG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp CGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTaGTTGGAAGGCACCCGGGACCAGTCCAAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: RGKVENLGAWRL*LEGTRDQSKGL
Trigger: CAGCCCCTTGGACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp CTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTaGACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGG +
Preference number: 3 (lower is better)
Translates to: LKSAHTTEADAG*TSRAGGRSRIW
Trigger: CCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCCAGGCAGAACCTCCTTaGCTGGCAAAGACCCTTGGC +
Preference number: 3 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGQAEPP*LAKTLG
Trigger: GCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTG...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 72 bp GCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTTCCTaGGAGGCGTGGCTGTTTGGGAAACTCTTGGACCCA +
Preference number: 3 (lower is better)
Translates to: ACLSSRNRQVGS*EAWLFGKLLDP
Trigger: TGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp GGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTaGAAGGCACCCGGGACCAGTCCAAGGGGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GRSRIWEHGDCA*KAPGTSPRGCL
Trigger: CAGGCAGCCCCTTGGACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCGGGAGTTTGCTGTTTTaGTCCCGTGGATACCCAGGC +
Preference number: 3 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGGSLLF*SRGYPG
Trigger: GCCTGGGTATCCACGGGACAAAAACAGCAAACTCCC...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp TACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTaGAGAAATCAGATGGGGCTATGCAGCAGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: YGRVPVLEAGGN*RNQMGLCSSSG
Trigger: CCCTGAGCTGCTGCATAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp CCAAACCTCACCAGCAGCTTGCACCCTGACCCACCCTaGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: PNLTSSLHPDPP*SGFHGNVPQGS
Trigger: ACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCCTCATTCTGCCAGGCTaGGGGACGAGGTCCCTGCCA +
Preference number: 3 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCLILPG*GTRSLP
Trigger: TGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGAG...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGGACAGGGGAGAGTTTaGCAGAGAGGGTCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCGQGRV*QRGSAL
Trigger: GAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTCC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCTCATTCTGCCAGGCTaGGGGACGAGGTCCCTGCCA +
Preference number: 3 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPLILPG*GTRSLP
Trigger: TGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGAG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGCATGGAGACTGTGCTaGGAAGGCACCCGGGACCAG +
Preference number: 3 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPAWRLC*EGTRDQ
Trigger: CTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 72 bp GATGAGGTGGGATGTGTGTGGCACACGCCTGACAGCTaGACCAAACAGGGCACACGGGCTCTCCTAAGAGTC +
Preference number: 3 (lower is better)
Translates to: DEVGCVWHTPDS*TKQGTRALLRV
Trigger: GACTCTTAGGAGAGCCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CAA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGGACAGGGGAGAGTTTaGCAGAGAGGGTCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTGQGRV*QRGSAL
Trigger: GAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTCC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGGACAGGGGAGAGTTTaGCAGAGAGGGTCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAGQGRV*QRGSAL
Trigger: GAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTCC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGTGCTGGCAAAGACCCTaGGCGCTCTCAGTCCCGAAC +
Preference number: 3 (lower is better)
Translates to: GTAWGTLSSKGISSLLKACWQRP*ALSVPN
Trigger: GTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCA...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp ACCCTGACCCACCCTGGAGCGGCTTCCATGGTAACGTaGCACAGGGAAGTACAGCAAATGACTGAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: TLTHPGAASMVT*HREVQQMTERD
Trigger: GTCCCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCCAGGGTGGGTCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp AGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTaGCGGGAACTGCAGAAATCAGATGGGGCTATGCAG +
Preference number: 3 (lower is better)
Translates to: RFQLRQSPRVGG*RELQKSDGAMQ
Trigger: CTGCATAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp CCTATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTaGAGGCTGGCGGGAACTGCAGAAATCAGATGGGGC +
Preference number: 3 (lower is better)
Translates to: PMKIPVTAESPC*RLAGTAEIRWG
Trigger: GCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp TGCAGAGAGGGTCAGCCCTCTGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGGGGCTTTATTCCAGAC +
Preference number: 3 (lower is better)
Translates to: CREGQPSGTLQR*GQRQLGGFIPD
Trigger: GTCTGGAATAAAGCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp TCAGAGAGGCTCAATTACAGGCAGAACCTCCTTTGCTaGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGC +
Preference number: 3 (lower is better)
Translates to: SERLNYRQNLLC*QRPLALSVPNS
Trigger: GCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTGTAATTGAGCCTCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp TGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: WVPERRGCLGNS*TQRSGSLKVSE
Trigger: TTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTCAGGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGAGAGGCGTGGCTGTTaGGGAAACTCTTGGACCCAA +
Preference number: 3 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAERRGC*GNSWTQ
Trigger: TTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGAGAGGCGTGGCTGTTaGGGAAACTCTTGGACCCAA +
Preference number: 3 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAERRGC*GNSWTQ
Trigger: TTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp TCATCAGAGAGGCTCAATTACAGGCAGAACCTCCTTTaGTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAAC +
Preference number: 3 (lower is better)
Translates to: SSERLNYRQNLL*WQRPLALSVPN
Trigger: GTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTGTAATTGAGCCTCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp AAAGCCTCACACCTATGCAGAATGAACACTTTCCGCTaGCGGGCTGCACTCCATTCTGAACAGGGGACCAAC +
Preference number: 3 (lower is better)
Translates to: KASHLCRMNTFR*RAALHSEQGTN
Trigger: GTTGGTCCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGCATGGAGACTGTGCTaGGAAGGCACCCGGGACCAG +
Preference number: 3 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNAWRLC*EGTRDQ
Trigger: CTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 72 bp TCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAATaGACACTTTCCGCTGGCGGGCTGCACTCCATTCTG +
Preference number: 3 (lower is better)
Translates to: SCVQIKPHTYAE*TLSAGGLHSIL
Trigger: CAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 72 bp CATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTaGAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTA +
Preference number: 3 (lower is better)
Translates to: HGNVPQGSTAND*KGQKRLRCGKL
Trigger: TAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 72 bp CTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTGGGTaGCTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTC +
Preference number: 3 (lower is better)
Translates to: LRRKGPFQEAIG*LMVSVPESQVF
Trigger: GAAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CCA 72 bp GGGCGGGCATTACAAAACAATCTGGTGACCAGCCCATaGCTAGCAAAGGGCATTCCGTACAGACACTTCAGT +
Preference number: 3 (lower is better)
Translates to: GRALQNNLVTSP*LAKGIPYRHFS
Trigger: ACTGAAGTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTGTAATGCCCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp CTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTaGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: LPPQKGTVSRSH*VTHGVSSRVSG
Trigger: ACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CAA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACTCATTCTGCCAGGCTaGGGGACGAGGTCCCTGCCA +
Preference number: 3 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAELILPG*GTRSLP
Trigger: TGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGAG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGGGATTTCTTCTCTATaGAAGGCGGCAAGGCTAGGA +
Preference number: 3 (lower is better)
Translates to: GAASMVTCHREVQQMTERGISSL*KAARLG
Trigger: TCCTAGCCTTGCCGCCTTCAATAGAGAAGAAATCCC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGGGAGTTTGCTGTTTTaGTCCCGTGGATACCCAGGC +
Preference number: 3 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVGSLLF*SRGYPG
Trigger: GCCTGGGTATCCACGGGACAAAAACAGCAAACTCCC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR TCA 72 bp TATATACACGTACGCACACACACGCACGAACACACATaGACACCCGTGAGCCTGATGCTTCCAAACCTCACC +
Preference number: 3 (lower is better)
Translates to: YIHVRTHTHEHT*TPVSLMLPNLT
Trigger: GGTGAGGTTTGGAAGCATCAGGCTCACGGGTGTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp TTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATaGAGAATGAACACTTTCCGCTGGCGGGCTGCACTC +
Preference number: 3 (lower is better)
Translates to: FHVLCADKASHL*RMNTFRWRAAL
Trigger: GAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR GCA 72 bp CAGAGGGCCGGATTTTGTCCACAGGCCATCATAGTGTaGCGACTAGTTTGTACAGATGAAACAAAACCCGCC +
Preference number: 3 (lower is better)
Translates to: QRAGFCPQAIIV*RLVCTDETKPA
Trigger: GGCGGGTTTTGTTTCATCTGTACAAACTAGTCGGCACACTATGATGGCCTGTGGACAAAATCCGGCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CAA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGAGAGGCGTGGCTGTTaGGGAAACTCTTGGACCCAA +
Preference number: 3 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNERRGC*GNSWTQ
Trigger: TTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGGGATTTCTTCTCTATaGAAGGCGGCAAGGCTAGGA +
Preference number: 3 (lower is better)
Translates to: GLSAGFHVLCADKASHLCGISSL*KAARLG
Trigger: TCCTAGCCTTGCCGCCTTCAATAGAGAAGAAATCCC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR-3UTR CAA 90 bp GACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTTCTTGGTTTTGGATAACTaGGCGGCATTCTCACGAAGC +
Preference number: 3 (lower is better)
Translates to: DTCGKNFLSLADREPNPFLVLDN*AAFSRS
Trigger: GCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAA...GAAGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CCA 72 bp GGACAAAGTCTGAGGGAGTTTGCTGTTTTTGTCCCGTaGATACCCAGGCAGCTTAGACAAACCTTCATTGGC +
Preference number: 3 (lower is better)
Translates to: GQSLREFAVFVP*IPRQLRQTFIG
Trigger: GCCAATGAAGGTTTGTCTAAGCTGCCTGGGTATCCACGGGACAAAAACAGCAAACTCCCTCAGACTTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp GAAAGGGACCGTTTCAAGAAGCCATTGGGTGACTCATaGTGTCAGTTCCAGAGTCTCAGGTCTTCTCAGTTG +
Preference number: 3 (lower is better)
Translates to: ERDRFKKPLGDS*CQFQSLRSSQL
Trigger: CAACTGAGAAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR GCA 72 bp AGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTaGATATTTTATACAGGAGCCCTTCATGGCTACTTT +
Preference number: 3 (lower is better)
Translates to: SLSLHKLRAGEV*IFYTGALHGYF
Trigger: AAAGTAGCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CCA 72 bp TTGGAAGCCTCTCTCATCCTTTGGTTTTGGATAACTTaGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAG +
Preference number: 3 (lower is better)
Translates to: LEASLILWFWIT*RHSHEALPNKK
Trigger: CTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGAGAGGCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CAA 90 bp CACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTCTCATCCTTTGGTTTaGGATAACTTGGCGGCATTC +
Preference number: 3 (lower is better)
Translates to: HKLRAGEVCIFYTGALHGSHPLV*DNLAAF
Trigger: GAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGA...GCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CAA 90 bp TCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGAGCCTCTCTCATCCTTaGGTTTTGGATAACTTGGCG +
Preference number: 3 (lower is better)
Translates to: STNSGQGKCAYFIQEPFMSLSHP*VLDNLA
Trigger: CGCCAAGTTATCCAAAACCAAAGGATGAGAGAGGCT...CATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CAA 90 bp AGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGGAGGTGATTCTTTCTaGGAGCAGAATACATCCCCT +
Preference number: 3 (lower is better)
Translates to: SLSLHKLRAGEVCIFYTGGGDSF*EQNTSP
Trigger: AGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCC...TCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR-3UTR CAA 90 bp ATGTTCTCCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATAAGATTTCATCCGTCTaGGTAAATCTCTCAAGCCGT +
Preference number: 3 (lower is better)
Translates to: MFSSNKVPQKESREPAVDKISSV*VNLSSR
Trigger: ACGGCTTGAGAGATTTACCAAGACGGATGAAATCTT...ATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGGAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
3UTR TCA 72 bp AACACAACCACTTCAAGTTTATACATGGACAAAGTCTaGGGGAGTTTGCTGTTTTTGTCCCGTGGATACCCA +
Preference number: 3 (lower is better)
Translates to: NTTTSSLYMDKV*GSLLFLSRGYP
Trigger: TGGGTATCCACGGGACAAAAACAGCAAACTCCCTCAGACTTTGTCCATGTATAAACTTGAAGTGGTTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CCA 72 bp CATATTTTATACAGGAGCCCTTCATGGCTACTTTACTaGGAGGTGATTCTTTCTTGGAGCAGAATACATCCC +
Preference number: 3 (lower is better)
Translates to: HILYRSPSWLLY*EVILSWSRIHP
Trigger: GGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTATAAAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR TCA 72 bp ACAGGCCATCATAGTGTGCCGACTAGTTTGTACAGATaGAACAAAACCCGCCATGAGTTGATAATTTTTGAA +
Preference number: 3 (lower is better)
Translates to: TGHHSVPTSLYR*NKTRHELIIFE
Trigger: TTCAAAAATTATCAACTCATGGCGGGTTTTGTTTCATCTGTACAAACTAGTCGGCACACTATGATGGCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCCTGTGTCCCGCCACTaGGGACTGCCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGPVSRH*GLPGGP
Trigger: GGGTCCCCCAGGCAGTCCCCAGTGGCGGGACACAGG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTTGTGGCCTGAGTTCTTaGCGGGCTGGCGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGCGLSS*RAGGAG
Trigger: GCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACA...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGGCCTGGGCAGCCGCTaGGAGCTGCTGTGTACCCGA +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGGLGSR*ELLCTR
Trigger: TCGGGTACACAGCAGCTCCCAGCGGCTGCCCAGGCC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAAGAGCGTCGGGGGCCTaGGCAGCCGCTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRRASGA*AAAGSC
Trigger: GCAGCTCCCAGCGGCTGCCCAGGCCCCCGACGCTCT...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCGCCAGGTGGGTTCCTaGGAGGCGTGGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGRQVGS*EAWLFG
Trigger: CCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACGGGTCAGGCCTGCCTaGGCTCACGGAACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRRVRPA*AHGTAR
Trigger: CCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGGGCCTCCCAAGGGCTaGGGGGCCAGTGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRGPPKG*GASGLS
Trigger: TGAGAGGCCACTGGCCCCGCAGCCCTTGGGAGGCCC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGTCTGCCATGACTACTaGCCCAGCACCCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGVCHDY*PSTPVG
Trigger: CCCCACCGGGGTGCTGGGGCAGTAGTCATGGCAGAC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGGAGGCAGGCAGAGATaGCCTCGCCCCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQGGRQR*PRPRAR
Trigger: GCGGGCCCTGGGGCGAGGCCATCTCTGCCTGCCTCC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGCCGGGAGTCTGCCATaGCTACTGCCCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRAGSLP*LLPQHP
Trigger: GGGGTGCTGGGGCAGTAGTCATGGCAGACTCCCGGC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGGGCCTCCCAAGGGCTaGGGGGCCAGTGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQGPPKG*GASGLS
Trigger: TGAGAGGCCACTGGCCCCGCAGCCCTTGGGAGGCCC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGGACTACATGTGCGCTaGGGGGCGTGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQGLHVR*GAWEGR
Trigger: CCGCCCCTCCCACGCCCCCCAGCGCACATGTAGTCC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGGCTTTATTCCAGACTaGCATCCGCGGGTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGGFIPD*HPRVGG
Trigger: TCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCCCGCCGGGTCAGGCCTaGCTGAGCTCACGGAACCGC +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGPPGQA*LSSRNR
Trigger: GCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGG...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCTGGGGACGAGGTCCCTaGCAGGCTGTGCCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGWGRGP*QAVPPG
Trigger: ACCCGGCGGCACAGCCTGGCAGGGACCTCGTCCCCA...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGCCCAGGCCGGGAGTCTaGCATGACTACTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRPRPGV*HDYCPS
Trigger: GCTGGGGCAGTAGTCATGGCAGACTCCCGGCCTGGG...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTACCAGTCCAAGGGGCTaGCTGGGGGTCCTAGAATCC +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGTSPRG*LGVLES
Trigger: GGATTCTAGGACCCCCAGGCAGCCCCTTGGACTGGT...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCACCCTGACCCACCCTaGAGCGGCTTCCATGGTAAC +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGHPDPP*SGFHGN
Trigger: GTTACCATGGAAGCCGCTCCAGGGTGGGTCAGGGTG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCGCCGGGAGTCTGCCATaGCTACTGCCCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGAGSLP*LLPQHP
Trigger: GGGGTGCTGGGGCAGTAGTCATGGCAGACTCCCGGC...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGCAGCAGCTTGCACCCTaGCCCACCCTGGAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQQQLAP*PTLERL
Trigger: AAGCCGCTCCAGGGTGGGTCAGGGTGCAAGCTGCTG...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCAACCCCTCTCATTCTaGCAGGCTTGGGGACGAGGT +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGQPLSF*QAWGRG
Trigger: ACCTCGTCCCCAAGCCTGGCAGAATGAGAGGGGTTG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAGAGGCAGACGCAGGCTaGACCTCCCGGGCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAEADAG*TSRAGG
Trigger: TCCCCCGGCCCGGGAGGTGCAGCCTGCGTCTGCCTC...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCGGCCTGGGCAGCCGCTaGGAGCTGCTGTGTACCCGA +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGGLGSR*ELLCTR
Trigger: TCGGGTACACAGCAGCTCCCAGCGGCTGCCCAGGCC...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGCACGGAACCGCCAGGTaGGTTCCTGAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQHGTAR*VPERRG
Trigger: GCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTG...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCTGGAGCTCCAGGGGCTaGCAGGGGAGCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGWSSRG*QGSSTA
Trigger: GGCTGTGGAGCTCCCCTGCCAGCCCCTGGAGCTCCA...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGCAGAGTCCCCGTGTTaGAGGCTGGCGGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRAESPC*RLAGTA
Trigger: TGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTTCCACGCCTCGGGTaGAACGCCAGTCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRLPRLG*NASQSA
Trigger: TGCTGACTGACTGGCGTTTCACCCGAGGCGTGGAAG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGCGGGTCGGGGGAACTaGAGGGCCTCCTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEAGRGN*RASWDQ
Trigger: CTGATCCCAGGAGGCCCTGCAGTTCCCCCGACCCGC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGACAGGGGAGAGTTTTaGAGAGAGGGTCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGDRGEF*REGQPS
Trigger: AGAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGTCCCTGCCAGGCTGTaGCGCCGGGTCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAVPARL*RRVRPA
Trigger: GGCAGGCCTGACCCGGCGGCACAGCCTGGCAGGGAC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCATGGGGACGAGGTCCCTaGCAGGCTGTGCCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAWGRGP*QAVPPG
Trigger: ACCCGGCGGCACAGCCTGGCAGGGACCTCGTCCCCA...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCCCCAGGCCGGGAGTCTaGCATGACTACTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGPRPGV*HDYCPS
Trigger: GCTGGGGCAGTAGTCATGGCAGACTCCCGGCCTGGG...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTAGCGAGATGACAGTGTaGTCCCACACAGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGSEMTV*SHTGPH
Trigger: ATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCT...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGAACAGCCACCCCCAGTaGCCAGTCTCCTCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQNSHPQ*PVSSPN
Trigger: GTTCGGCGAGGAGACTGGCCACTGGGGGTGGCTGTT...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGGGGTCCTAGAATCCTaGGGGCCCAGGCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGGVLES*GPRPGV
Trigger: GACTCCCGGCCTGGGCCCCCAGGATTCTAGGACCCC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGCTTCCACGCCTCGGGTaGAACGCCAGTCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQLPRLG*NASQSA
Trigger: TGCTGACTGACTGGCGTTTCACCCGAGGCGTGGAAG...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGTCCGTTGCTACCGATaGGTTCGGCAAATCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRVRCYR*VRQIPR
Trigger: TCGGGGGATTTGCCGAACTCATCGGTAGCAACGGAC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAGCCGGGAGTCTGCCATaGCTACTGCCCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAAGSLP*LLPQHP
Trigger: GGGGTGCTGGGGCAGTAGTCATGGCAGACTCCCGGC...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGCACCAGGGGAACCTTaGTTCGTCCCCGACTCAAAC +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRAPGEP*FVPDSN
Trigger: GTTTGAGTCGGGGACGAAGCAAGGTTCCCCTGGTGC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTACTTCCACCGAAAACTaGGGTCATAAGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGTSTEN*GHKHQG
Trigger: CCCCTGGTGCTTATGACCGCAGTTTTCGGTGGAAGT...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTTGTCTATCTCCTGCATaGCGCACAGCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGCLSPA*RTASAP
Trigger: TGGAGCTGATGCTGTGCGGCATGCAGGAGATAGACA...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGCGGGTCGGGGGAACTaGAGGGCCTCCTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGAGRGN*RASWDQ
Trigger: CTGATCCCAGGAGGCCCTGCAGTTCCCCCGACCCGC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGGCCGGCATGTGTCCTaGGACTCAGCCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEGRHVS*DSASTA
Trigger: AGCGGTGGAGGCTGAGTCGCAGGACACATGCCGGCC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGCAACCCCTCTCATTCTaGCAGGCTTGGGGACGAGGT +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRQPLSF*QAWGRG
Trigger: ACCTCGTCCCCAAGCCTGGCAGAATGAGAGGGGTTG...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGTCTGCCATGACTACTaGCCCAGCACCCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEVCHDY*PSTPVG
Trigger: CCCCACCGGGGTGCTGGGGCAGTAGTCATGGCAGAC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGTTGGCCAAGCCACTGTaGCCTGAGTTCTTGACGGGC +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRLAKPL*PEFLTG
Trigger: GCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAA...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGTGTACCCGAAGTGCTaGGTTCCTCTCCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRVYPKC*VPLLQP
Trigger: CGGCTGAAGGAGAGGAACCCAGCACTTCGGGTACAC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGGGCCCAGGGGATCATaGTCAGTCGAAGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRGPRGS*SVEALE
Trigger: TTCGAGTGCTTCGACTGACCATGATCCCCTGGGCCC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAAGCAGGTGTGGCTTCTaGGCAGCCAGGTTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRSRCGF*AARFPC
Trigger: GCAAGGAAACCTGGCTGCCCAGAAGCCACACCTGCT...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCCTCGGTCTCCTCAATaGCATACAGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGPRSPQ*HTAASL
Trigger: GAGAGAAGCTGCTGTATGCCATTGAGGAGACCGAGG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACCACTGGGGACTGCCTaGGGGACCCTATCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRPLGTA*GTLSSK
Trigger: TTTGCTAGATAGGGTCCCCCAGGCAGTCCCCAGTGG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTATGAACACTTTCCGCTaGCGGGCTGCACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGMNTFR*RAALHS
Trigger: AGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCAT...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGGAAGGTCGAGAATCTaGGAGCATGGAGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGGRSRI*EHGDCA
Trigger: AGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGCGGGGCCACCTCGTTaGAGCCATCCAGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEAGPPR*SHPGRL
Trigger: AAGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCCGCCAGGTGGGTTCCTaGGAGGCGTGGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGRQVGS*EAWLFG
Trigger: CCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCG...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCCAGCAGCTTGCACCCTaGCCCACCCTGGAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGQQLAP*PTLERL
Trigger: AAGCCGCTCCAGGGTGGGTCAGGGTGCAAGCTGCTG...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGCTCAGAGCTCCCAATaGGCTTCCCAGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRAQSSQ*ASQSSW
Trigger: CCAAGAAGACTGGGAAGCGCATTGGGAGCTCTGAGC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGCTGTGTACCCGAAGTaGTGGGTTCCTCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRAVYPK*WVPLLQ
Trigger: CTGAAGGAGAGGAACCCAGCACTTCGGGTACACAGC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGCAGCCGCTGGGAGCTaGTGTGTACCCGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEAAAGS*CVPEVL
Trigger: CAGCACTTCGGGTACACAGCAGCTCCCAGCGGCTGC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGTGCCTCGGGGATCTGTaGGTTTTTCCCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQCLGDL*VFPSLE
Trigger: CTCCAGGCTGGGAAAAACGCACAGATCCCCGAGGCA...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGAATCTTTGGCTGAAGTaGTGCATGGCCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRNLWLK*CMAPWS
Trigger: GCTCCAGGGGGCCATGCAGCACTTCAGCCAAAGATT...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCEVSGL*GSPWGC
Trigger: GCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACCGCCGGGTCAGGCCTaGCTGAGCTCACGGAACCGC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTPPGQA*LSSRNR
Trigger: GCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCACCGTGAAGCTGCCGTaGCCACAGAAGCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGTVKLP*PQKRRR
Trigger: TCGGCGCCGCTTCTGTGGCCACGGCAGCTTCACGGT...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRNRHVR*AALAVP
Trigger: GGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATT...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGGGCCCAGGGGATCATaGTCAGTCGAAGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQGPRGS*SVEALE
Trigger: TTCGAGTGCTTCGACTGACCATGATCCCCTGGGCCC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGTCCTGGATCATCCCCTaGGTCCGGGGATCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGSWIIP*VRGSSH
Trigger: GTGGGAGGATCCCCGGACCCAGGGGATGATCCAGGA...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGGCAGAGCTGGTTCCTaGATCATCCCCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGGRAGS*IIPWVR
Trigger: CCGGACCCAGGGGATGATCCAGGAACCAGCTCTGCC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTAGAACTCAGGGTCAATaGACTCCAGGTCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGRTQGQ*TPGLSG
Trigger: CCCTGAAAGACCTGGAGTCCATTGACCCTGAGTTCT...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGCGGTTGAAGCAGGTGTaGCTTCTGGGCAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQRLKQV*LLGSQV
Trigger: AACCTGGCTGCCCAGAAGCCACACCTGCTTCAACCG...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGAGAGGGTCAGCCCTCTaGAACTTTGCAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRRGSAL*NFAKVG
Trigger: CCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCT...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGGAGGCAGGCAGAGATaGCCTCGCCCCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGGGRQR*PRPRAR
Trigger: GCGGGCCCTGGGGCGAGGCCATCTCTGCCTGCCTCC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTGGAGCTCCAGGGGCTaGCAGGGGAGCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAWSSRG*QGSSTA
Trigger: GGCTGTGGAGCTCCCCTGCCAGCCCCTGGAGCTCCA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGCCCCGTGTTGGAGGCTaGCGGGAACTGCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQPRVGG*RELQKS
Trigger: TGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGG...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGCTGGTGACCAGCCCATaGCTAGCAAAGGGCATTCCG +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQLVTSP*LAKGIP
Trigger: CGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAG...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAACTGCCAGCAGCGAGATaGCAGTGTGGTCCCACACAG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWELPAAR*QCGPTQ
Trigger: CTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAG...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCGGGTCAGGCCTGCCTaGGCTCACGGAACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGRVRPA*AHGTAR
Trigger: CCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGGCTGCACTCCATTCTaGACAGGGGACCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGGCTPF*TGDQQA
Trigger: GGCCTGTTGGTCCCCTGTTCAGAATGGAGTGCAGCC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTAGGCAGGGCCACTCCTaGCCGGCTAGAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPARQGHS*PARAGR
Trigger: TCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCCT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGCCACTGCTCATAGTTaGGCACGTACTCCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEATAHS*ARTPRS
Trigger: CGACCGCGGAGTACGTGCGCAACTATGAGCAGTGGC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAACCACTCTCTGGCGATaGCCCCATAGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWETTLWR*PHSPGP
Trigger: AGGGCCTGGACTATGGGGGCATCGCCAGAGAGTGGT...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCAGGAAGGCTTTGGTCTaGTCTTCCACGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGRKALV*SSTPRV
Trigger: CACCCGAGGCGTGGAAGAGCAGACCAAAGCCTTCCT...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGCTCATGTCTATCTCCTaGATGCCGCACAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRLMSIS*MPHSIS
Trigger: GCTGATGCTGTGCGGCATGCAGGAGATAGACATGAG...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTCATGTCTATCTCCTaGATGCCGCACAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRLMSIS*MPHSIS
Trigger: GCTGATGCTGTGCGGCATGCAGGAGATAGACATGAG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGTCCCTGCCAGGCTGTaGCGCCGGGTCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTVPARL*RRVRPA
Trigger: GGCAGGCCTGACCCGGCGGCACAGCCTGGCAGGGAC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCCAGGCCGGGAGTCTaGCATGACTACTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAPRPGV*HDYCPS
Trigger: GCTGGGGCAGTAGTCATGGCAGACTCCCGGCCTGGG...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGAGGCAGACGCAGGCTaGACCTCCCGGGCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTEREADAG*TSRAGG
Trigger: TCCCCCGGCCCGGGAGGTGCAGCCTGCGTCTGCCTC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGCTACTGCTGTTCCACTaGAGTCTCTCGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRLLLFH*SLSKAA
Trigger: AGCTGCCTTCGAGAGACTCCAGTGGAACAGCAGTAG...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAGAGCGTCGGGGGCCTaGGCAGCCGCTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTRASGA*AAAGSC
Trigger: GCAGCTCCCAGCGGCTGCCCAGGCCCCCGACGCTCT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAGCGTTTTTCCCAGCCTaGAGGAAGGGGCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAAFFPA*RKGPLP
Trigger: TGGGAGCGGCCCCTTCCTCCAGGCTGGGAAAAACGC...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGTGGTGCGGGTATTGTaGTCCACAAAGTATCGCACC +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRVVRVL*STKYRT
Trigger: GGTGCGATACTTTGTGGACCACAATACCCGCACCAC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACCTCGGTCTCCTCAATaGCATACAGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRPRSPQ*HTAASL
Trigger: GAGAGAAGCTGCTGTATGCCATTGAGGAGACCGAGG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACTCAGCCTCCACCGCTaGCGCCTGCTAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTLSLHR*RLLGRQ
Trigger: CTGCCTCCCTAGCAGGCGCCAGCGGTGGAGGCTGAG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACATGGAGCTCCAGGGGCTaGCAGGGGAGCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTWSSRG*QGSSTA
Trigger: GGCTGTGGAGCTCCCCTGCCAGCCCCTGGAGCTCCA...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAATGAACACTTTCCGCTaGCGGGCTGCACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRMNTFR*RAALHS
Trigger: AGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCAT...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGCAGAGTCCCCGTGTTaGAGGCTGGCGGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGAESPC*RLAGTA
Trigger: TGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCCTGGTGACCAGCCCATaGCTAGCAAAGGGCATTCCG +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGLVTSP*LAKGIP
Trigger: CGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAG...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTTGTGGCCTGAGTTCTTaGCGGGCTGGCGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPCGLSS*RAGGAG
Trigger: GCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACA...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGTCCGTTGCTACCGATaGGTTCGGCAAATCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEVRCYR*VRQIPR
Trigger: TCGGGGGATTTGCCGAACTCATCGGTAGCAACGGAC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCGGGTCAGGCCTGCCTaGGCTCACGGAACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKARVRPA*AHGTAR
Trigger: CCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGCTAGAGCTGGCAGATaGCATATCATCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRARAGR*HIITVK
Trigger: CTTCACGGTGATGATATGGCATCTGCCAGCTCTAGC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACTTGACGGGCTGGCGGTaGCGGCTCCGAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHLTGWR*RLRAPG
Trigger: CCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAA...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGCAGCCAGGTTTCCTTaGCAACTTTGTCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGAARFP*QLCQCK
Trigger: TTTGCATTGACAAAGTTGGCAAGGAAACCTGGCTGC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTEREVSGL*GSPWGC
Trigger: GCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGCCGCCGGGTCAGGCCTaGCTGAGCTCACGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERPPGQA*LSSRNR
Trigger: GCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGG...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAACCAGTCCAAGGGGCTaGCTGGGGGTCCTAGAATCC +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTATSPRG*LGVLES
Trigger: GGATTCTAGGACCCCCAGGCAGCCCCTTGGACTGGT...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGCTTCCATGGTAACGTaGCACAGGGAAGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRASMVT*HREVQQ
Trigger: TTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGCAGGCTCGGCCCAGTaGCTCCGCTCAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAAGSAQ*LRSAPA
Trigger: AGCCGGAGCTGAGCGGAGGCACTGGGCCGAGCCTGC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGTTGCTGGGGTTGTTCTaGCTGAAGCACCCGAATGTC +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQLLGLF*LKHPNV
Trigger: GACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAA...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGAGTTCTTGACGGGCTaGCGGTGCCGGCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTEFLTG*RCRLRA
Trigger: TGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GAGACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTAGAGCGTCGGGGGCCTaGGCAGCCGCTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ETHVERTFCPWQTGNQTPRASGA*AAAGSC
Trigger: GCAGCTCCCAGCGGCTGCCCAGGCCCCCGACGCTCT...AGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGNRHVR*AALAVP
Trigger: GGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATT...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAGGGGCCGCTCCCAGGTaGTGGTCTTGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAGAAPR*WSWYCG
Trigger: ACCACAATACCAAGACCACCACCTGGGAGCGGCCCC...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCTCGGACGCTGCCAGGTaGTGGTCCGAGTATTGTGAT +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGSDAAR*WSEYCD
Trigger: ATCACAATACTCGGACCACCACCTGGCAGCGTCCGA...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCACGGGGATCCTCCCACTaGGTCGTGCGAGTGTTATGG +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTARGSSH*VVRVLW
Trigger: CCATAACACTCGCACGACCCAGTGGGAGGATCCCCG...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCTCCTGGGGGCAGAGCTaGTTCCTGGATCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGSWGQS*FLDHPL
Trigger: CAGGGGATGATCCAGGAACCAGCTCTGCCCCCAGGA...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGCACATACACCCAGGGTaGGGTCTAGAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGHIHPG*GLEDRG
Trigger: TCCCCTGTCCTCTAGACCCCACCCTGGGTGTATGTG...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGCTGGCAAAGACCCTTaGCGCTCTCAGTCCCGAACA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGAGKDP*RSQSRT
Trigger: TGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCATCATTCTGCCAGGCTTaGGGACGAGGTCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTASFCQA*GRGPCQ
Trigger: CTGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGA...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAACCAACAGGCCCTCCTaGAGCTCCAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTTNRPS*SSRGWQ
Trigger: CTGCCAGCCCCTGGAGCTCCAGGAGGGCCTGTTGGT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGTCAGGGCCTTTCTGCTaGTTTTCATGTCCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRSGPFC*FSCPVC
Trigger: GCACACAGGACATGAAAACCAGCAGAAAGGCCCTGA...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GAAGCCCTGCCGAATAAGAAGCACTCTGCCTTTAGGGACAGGCTGGGCATAGGGCAAGCCACTGTGGCCTaGGTTCTTGACGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: EALPNKKHSAFRDRLGIGQATVA*VLDGLA
Trigger: CGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTG...CCCTATGCCCAGCCTGTCCCTAAAGGCAGAGTGCTTCTTATTCGGCAGGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTATGGCCCCCTGGAGCTaGTTCCGCTGCGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPMAPWS*FRCDCH
Trigger: GTGGCAGTCGCAGCGGAATCAGCTCCAGGGGGCCAT...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGGGTTGGTCTCTTATTaGGCATCCGCTTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRGLVSY*ASACRK
Trigger: CTTTCTACAAGCGGATGCTCAATAAGAGACCAACCC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGGCGGCAGGTACCGGTaGCAAACTGCAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGGGRYR*QTAAAG
Trigger: TCCGGCTGCTGCAGTTTGTCACCGGTACCTGCCGCC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCTGCCAGCAGCGAGATaGCAGTGTGGTCCCACACAG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPALPAAR*QCGPTQ
Trigger: CTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAG...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGGGAAGTACAGCAAATaGCTGAAAGGGACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRGKYSK*LKGTEE
Trigger: CTCTTCTGTCCCTTTCAGTCATTTGCTGTACTTCCC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCAGCAGCTTGCACCCTaGCCCACCCTGGAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGQQLAP*PTLERL
Trigger: AAGCCGCTCCAGGGTGGGTCAGGGTGCAAGCTGCTG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGGCGGCCAAGGCGACTaGAATCACCACCACCTCCAA +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAGGQGD*NHHHLQ
Trigger: TTGGAGGTGGTGGTGATTTCAGTCGCCTTGGCCGCC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR TCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGTGTGTGGCACACGCCTaGCAGCTGAACCAAACAGGG +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGCVAHA*QLNQTG
Trigger: CCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACA...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGCCTTTGTTCTCCGTCTaGAGGTTCAGGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGPLFSV*RFRVSC
Trigger: GCAGCTGACCCTGAACCTGCAGACGGAGAACAAAGG...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGTCCGCGGTCGGACGCTaGCAGGTGGTGGTCCGAGTA +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGSAVGR*QVVVRV
Trigger: TACTCGGACCACCACCTGGCAGCGTCCGACCGCGGA...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAGCACCAGGGGAACCTTaGTTCGTCCCCGACTCAAAC +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAAPGEP*FVPDSN
Trigger: GTTTGAGTCGGGGACGAAGCAAGGTTCCCCTGGTGC...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTACCACTCTCTGGCGATaGCCCCATAGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPATTLWR*PHSPGP
Trigger: AGGGCCTGGACTATGGGGGCATCGCCAGAGAGTGGT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGAGTGCCGGTAGATGGTaGTCTTCTGCCAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGSAGRW*SSASRS
Trigger: TGAGCGACTGGCAGAAGAGCACCATCTACCGGCACT...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGCGGGTCGGGGGAACTaGAGGGCCTCCTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTAGRGN*RASWDQ
Trigger: CTGATCCCAGGAGGCCCTGCAGTTCCCCCGACCCGC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGGAGCATGGAGACTGTaGTTGGAAGGCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAGAWRL*LEGTRD
Trigger: GTCCCGGGTGCCTTCCAAGCACAGTCTCCATGCTCC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGCTTCCATGGTAACGTaGCACAGGGAAGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQASMVT*HREVQQ
Trigger: TTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGAGTTCTTGACGGGCTaGCGGTGCCGGCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGEFLTG*RCRLRA
Trigger: TGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGGTGTACCCGAAGTGCTaGGTTCCTCTCCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGVYPKC*VPLLQP
Trigger: CGGCTGAAGGAGAGGAACCCAGCACTTCGGGTACAC...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTCCTGGGGGCAGAGCTaGTTCCTGGATCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPASWGQS*FLDHPL
Trigger: CAGGGGATGATCCAGGAACCAGCTCTGCCCCCAGGA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACAGGTCTTTCAGGGTTaGTCTCTTATTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRQVFQG*SLIEHP
Trigger: CGGATGCTCAATAAGAGACCAACCCTGAAAGACCTG...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAAGCAGGTGTGGCTTCTaGGCAGCCAGGTTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTASRCGF*AARFPC
Trigger: GCAAGGAAACCTGGCTGCCCAGAAGCCACACCTGCT...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGGTAGCTCTTGTAGGGTaGAAGATCCAGACGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRVALVG*KIQTVE
Trigger: TTCAACCGTCTGGATCTTCCACCCTACAAGAGCTAC...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGG +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGGTLQR*GQRQLG
Trigger: CCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCC...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGCTGGCAAAGACCCTTaGCGCTCTCAGTCCCGAACA +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGAGKDP*RSQSRT
Trigger: TGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCATGGGGTGCCAGCTCCTaGACAGAAAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAWGASS*TESDSS
Trigger: GCTGCTGTCACTTTCTGTCCAGGAGCTGGCACCCCA...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGCAGAGTCCCCGTGTTaGAGGCTGGCGGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTAESPC*RLAGTA
Trigger: TGCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGGTGCGGCGGATAGGTTaGGGGTTACAGATCGGGAGT +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGVRRIG*GLQIGS
Trigger: ACTCCCGATCTGTAACCCCCAACCTATCCGCCGCAC...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGAGTTAATTCGAGGTTaGCGATTATGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQELIRG*RLCTLG
Trigger: GCCCAAGGTGCATAATCGTCAACCTCGAATTAACTC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR TCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTACCTTTAAATCTAAATaGCTCTGTGCCGTGACATTC +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGTFKSK*LCAVTF
Trigger: GAATGTCACGGCACAGAGTCATTTAGATTTAAAGGT...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR TCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAAGACGTTGGAGAGGTTaGCAGATGCGGTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTARRWRG*QMRCLA
Trigger: TGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCT...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCAAGCCACTGTGGCCTaGGTTCTTGACGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGQATVA*VLDGLA
Trigger: CGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCTGGAGGAGGCGGGGTTaGTCTGCAGGCAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGWRRRG*SAGSNC
Trigger: ACAATTACTGCCTGCAGATCAACCCCGCCTCCTCCA...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCCTTGTTCTCCTCTGTaGCCCGGATGCTCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGPCSPL*PGCSRR
Trigger: GCGGCGAGAGCATCCGGGTCACAGAGGAGAACAAGG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGTCCGTTGCTACCGATaGGTTCGGCAAATCCCCCGA +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAVRCYR*VRQIPR
Trigger: TCGGGGGATTTGCCGAACTCATCGGTAGCAACGGAC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCGCCAGGTGGGTTCCTaGGAGGCGTGGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKARQVGS*EAWLFG
Trigger: CCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCAATTCTTTTCTGAGTaGGTCTGCTGCTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGQFFSE*VCCYFQ
Trigger: CTGAAAATAGCAGCAGACTCACTCAGAAAAGAATTG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356003.6
CDS-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCGAGCACCGGGGCTTTaGTCGCCGGTTGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKARAPGL*SPVAGV
Trigger: AACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp GGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGCGAGCACCGGGGCTTTaGTCGCCGGTTGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GYGGMHQHSKSWPPMRLLRAPGL*SPVAGV
Trigger: AACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCG...CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGTTGACGGGCTGGCGGTaGCGGCTCCGAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVLTGWR*RLRAPG
Trigger: CCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAA...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp GTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTTTGACGGGCTGGCGGTaGCGGCTCCGAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: VSRSHWVTHGVSSRVSGLLTGWR*RLRAPG
Trigger: CCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAA...AAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGGCTGTGTACCCGAAGTaGTGGGTTCCTCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGAVYPK*WVPLLQ
Trigger: CTGAAGGAGAGGAACCCAGCACTTCGGGTACACAGC...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGCCACTGCTCATAGTTaGGCACGTACTCCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTATAHS*ARTPRS
Trigger: CGACCGCGGAGTACGTGCGCAACTATGAGCAGTGGC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGGCTTTATTCCAGACTaGCATCCGCGGGTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTGFIPD*HPRVGG
Trigger: TCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAAGGCAGAACCTCCTTTaGTGGCAAAGACCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTARQNLL*WQRPLA
Trigger: CGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCT...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGGCCGGCATGTGTCCTaGGACTCAGCCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAGRHVS*DSASTA
Trigger: AGCGGTGGAGGCTGAGTCGCAGGACACATGCCGGCC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCAGCTCAGGGCCTTTCTaGTGGTTTTCATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGSSGPF*WFSCPV
Trigger: CACAGGACATGAAAACCAGCAGAAAGGCCCTGAGCT...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGGAGCATGGAGACTGTaGTTGGAAGGCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTGAWRL*LEGTRD
Trigger: GTCCCGGGTGCCTTCCAAGCACAGTCTCCATGCTCC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGGAGCATGGAGACTGTaGTTGGAAGGCACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCGAWRL*LEGTRD
Trigger: GTCCCGGGTGCCTTCCAAGCACAGTCTCCATGCTCC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGAGGCAGACGCAGGCTaGACCTCCCGGGCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVEADAG*TSRAGG
Trigger: TCCCCCGGCCCGGGAGGTGCAGCCTGCGTCTGCCTC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAACTACTGCTGTTCCACTaGAGTCTCTCGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWELLLFH*SLSKAA
Trigger: AGCTGCCTTCGAGAGACTCCAGTGGAACAGCAGTAG...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTTGGCCAAGCCACTGTaGCCTGAGTTCTTGACGGGC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPALAKPL*PEFLTG
Trigger: GCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCCATTCACTGTGCCATTaGCCAAGCCACTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGHSLCH*PSHCGL
Trigger: CAGGCCACAGTGGCTTGGCCAATGGCACAGTGAATG...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGTTCTTCGGGATCAGTaGCTGTTGTGGGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQVLRDQ*LLWVHH
Trigger: ATGATGAACCCACAACAGCCACTGATCCCGAAGAAC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGGAGAGAAGTCGTGTTaGGATTCGGGGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGGEKSC*DSGSHS
Trigger: TGAGTGTGACCCCGAATCCCAACACGACTTCTCTCC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGATCGCACCCCCTCGCTaGTGTATTTCATCTCCCATC +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGIAPPR*CISSPI
Trigger: GATGGGAGATGAAATACACCAGCGAGGGGGTGCGAT...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCGGTTGAAGCAGGTGTaGCTTCTGGGCAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPARLKQV*LLGSQV
Trigger: AACCTGGCTGCCCAGAAGCCACACCTGCTTCAACCG...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGGACTACATGTGCGCTaGGGGGCGTGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCGLHVR*GAWEGR
Trigger: CCGCCCCTCCCACGCCCCCCAGCGCACATGTAGTCC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEGTLQR*GQRQLG
Trigger: CCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAAGAGGGTCAGCCCTCTaGAACTTTGCAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTARGSAL*NFAKVG
Trigger: CCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCT...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCTCTGCGGCAGCCCCTaGGGATGCAACACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPLCGSP*GCNTFP
Trigger: AGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGCTGGCAAAGACCCTTaGCGCTCTCAGTCCCGAACA +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAAGKDP*RSQSRT
Trigger: TGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCACAGAACCTCCTTTGCTaGCAAAGACCCTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAQNLLC*QRPLAL
Trigger: GAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTG...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGTTGGACCCAAAGGTCTaGGTCCCTCAAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGLDPKV*VPQGLR
Trigger: TCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGACCAACAGGCCCTCCTaGAGCTCCAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKATNRPS*SSRGWQ
Trigger: CTGCCAGCCCCTGGAGCTCCAGGAGGGCCTGTTGGT...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAACCAACAGGCCCTCCTaGAGCTCCAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSATNRPS*SSRGWQ
Trigger: CTGCCAGCCCCTGGAGCTCCAGGAGGGCCTGTTGGT...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGCCCCAGCACCCCGGTaGGGCATGGTCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERAPAPR*GMVTLK
Trigger: CTTCAAGGTGACCATGCCCCACCGGGGTGCTGGGGC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGGGGTCCTAGAATCCTaGGGGCCCAGGCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHGVLES*GPRPGV
Trigger: GACTCCCGGCCTGGGCCCCCAGGATTCTAGGACCCC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACACCCTGACCCACCCTaGAGCGGCTTCCATGGTAAC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTHPDPP*SGFHGN
Trigger: GTTACCATGGAAGCCGCTCCAGGGTGGGTCAGGGTG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTGTGGCCTGAGTTCTTaGCGGGCTGGCGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: HKLRAGEVCIFYTGALHGCGLSS*RAGGAG
Trigger: GCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACA...GCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACCTTGTTCTCCTCTGTaGCCCGGATGCTCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTPCSPL*PGCSRR
Trigger: GCGGCGAGAGCATCCGGGTCACAGAGGAGAACAAGG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGCGGGGCCACCTCGTTaGAGCCATCCAGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAAGPPR*SHPGRL
Trigger: AAGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGGCTGCACTCCATTCTaGACAGGGGACCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGGCTPF*TGDQQA
Trigger: GGCCTGTTGGTCCCCTGTTCAGAATGGAGTGCAGCC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGGGGCATGGTCACCTTaGAGATTTCAATATGACCTA +
Preference number: 4 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQGAWSP*RFQYDL
Trigger: TAGGTCATATTGAAATCTTCAAGGTGACCATGCCCC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAGGCGGTACGCGGGTaGAGGTGTGCCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAEAVRG*RCARVA
Trigger: CGCCACCCTGGCACACCTTCACCCGCGTACCGCCTC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR GCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGCAGCCGCTGGGAGCTaGTGTGTACCCGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAAAAGS*CVPEVL
Trigger: CAGCACTTCGGGTACACAGCAGCTCCCAGCGGCTGC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCTGCCTCGGGGATCTGTaGGTTTTTCCCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCCLGDL*VFPSLE
Trigger: CTCCAGGCTGGGAAAAACGCACAGATCCCCGAGGCA...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGCCACATAGTAAAACCTaGCTCGGGGATCTGTGCGTT +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGPHSKT*LGDLCV
Trigger: AACGCACAGATCCCCGAGGCAGGTTTTACTATGTGG...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCTCTTCGAAAAGCGTCTaGCTGGAAACGCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGSSKSV*LETLIF
Trigger: GAAGATCAGCGTTTCCAGGCAGACGCTTTTCGAAGA...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCGTGGGTCGTCACCTTaGCCAGTATCTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPARGSSP*PVSPCP
Trigger: AGGACATGGAGATACTGGGCAAGGTGACGACCCACG...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCTGTCTATCTCCTGCATaGCGCACAGCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGCLSPA*RTASAP
Trigger: TGGAGCTGATGCTGTGCGGCATGCAGGAGATAGACA...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGGGCCTCCCAAGGGCTaGGGGGCCAGTGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAGPPKG*GASGLS
Trigger: TGAGAGGCCACTGGCCCCGCAGCCCTTGGGAGGCCC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAGGGATCAGGCTTTTCTaGCAGCAGCGAGATGACAGT +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAGIRLF*QQRDDS
Trigger: ACTGTCATCTCGCTGCTGGCAGAAAAGCCTGATCCC...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGTGGGGACGAGGTCCCTaGCAGGCTGTGCCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVWGRGP*QAVPPG
Trigger: ACCCGGCGGCACAGCCTGGCAGGGACCTCGTCCCCA...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGAGCTCAGGGCCTTTCTaGTGGTTTTCATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGSSGPF*WFSCPV
Trigger: CACAGGACATGAAAACCAGCAGAAAGGCCCTGAGCT...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAAGCTCAGGGCCTTTCTaGTGGTTTTCATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWESSGPF*WFSCPV
Trigger: CACAGGACATGAAAACCAGCAGAAAGGCCCTGAGCT...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGCTTCCATGGTAACGTaGCACAGGGAAGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGASMVT*HREVQQ
Trigger: TTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACAAAGCAGTTTGTGCTaGGGGGCTGGTGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTQSSLC*GAGAGS
Trigger: AGAACCGGCACCAGCCCCCCAGCACAAACTGCTTTG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTTCGAGTTCTTGACGGGCTaGCGGTGCCGGCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: DTCGKNFLSLADREPNPFEFLTG*RCRLRA
Trigger: TGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTC...GAAGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCGATCAGTGGCTGTTGTaGGTTCATCATTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGDQWLL*VHHSLC
Trigger: GCACAGTGAATGATGAACCCACAACAGCCACTGATC...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCCAAGGGTGCAGCAGGTaGGGACGTCACACCAACAAC +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCQGCSR*GRHTNN
Trigger: GTTGTTGGTGTGACGTCCCCACCTGCTGCACCCTTG...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCTCCTTCAGCCGGTGTaGCTGGGGCAGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKALLQPV*LGQGEK
Trigger: CTTCTCTCCCTGCCCCAGCCACACCGGCTGAAGGAG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGACGCTGCCAGGTGGTaGTCCGAGTATTGTGATCCA +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPADAARW*SEYCDP
Trigger: TGGATCACAATACTCGGACCACCACCTGGCAGCGTC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCGGGGATCCTCCCACTaGGTCGTGCGAGTGTTATGG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGRGSSH*VVRVLW
Trigger: CCATAACACTCGCACGACCCAGTGGGAGGATCCCCG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGTCCTGGATCATCCCCTaGGTCCGGGGATCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERSWIIP*VRGSSH
Trigger: GTGGGAGGATCCCCGGACCCAGGGGATGATCCAGGA...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGGCAGAGCTGGTTCCTaGATCATCCCCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAGRAGS*IIPWVR
Trigger: CCGGACCCAGGGGATGATCCAGGAACCAGCTCTGCC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGGCAGAGCTGGTTCCTaGATCATCCCCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAGRAGS*IIPWVR
Trigger: CCGGACCCAGGGGATGATCCAGGAACCAGCTCTGCC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGTGGTGCGGGTATTGTaGTCCACAAAGTATCGCACC +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGVVRVL*STKYRT
Trigger: GGTGCGATACTTTGTGGACCACAATACCCGCACCAC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGGAAAAACCACTCTCTaGCGATGCCCCCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGGKTTL*RCPHSP
Trigger: TGGACTATGGGGGCATCGCCAGAGAGTGGTTTTTCC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAATCTGCTTGCTGTTCTTaGTGTAGTGCCGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWESACCS*CSAGRW
Trigger: CCATCTACCGGCACTACACCAAGAACAGCAAGCAGA...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTAGAGGGTCAGCCCTCTaGAACTTTGCAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPARGSAL*NFAKVG
Trigger: CCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTCT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACTCTGCGGCAGCCCCTaGGGATGCAACACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTLCGSP*GCNTFP
Trigger: AGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAAACAGCCACCCCCAGTaGCCAGTCTCCTCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSANSHPQ*PVSSPN
Trigger: GTTCGGCGAGGAGACTGGCCACTGGGGGTGGCTGTT...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGAGGCAGGCAGAGATaGCCTCGCCCCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGGRQR*PRPRAR
Trigger: GCGGGCCCTGGGGCGAGGCCATCTCTGCCTGCCTCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGCTGTTTTTGTCCCGTaGATACCCAGGCAGCTTAGA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGAVFVP*IPRQLR
Trigger: TCTAAGCTGCCTGGGTATCCACGGGACAAAAACAGC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAATGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWECLGNS*TQRSGS
Trigger: GGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACA...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGAGAGGCGTGGCTGTTTaGGAAACTCTTGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGRGVAV*ETLGPK
Trigger: TTTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCT...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGTCATTCTGCCAGGCTTaGGGACGAGGTCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGSFCQA*GRGPCQ
Trigger: CTGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGA...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGCCTGTGTCCCGCCACTaGGGACTGCCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVPVSRH*GLPGGP
Trigger: GGGTCCCCCAGGCAGTCCCCAGTGGCGGGACACAGG...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGCCCCAGCACCCCGGTaGGGCATGGTCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHAPAPR*GMVTLK
Trigger: CTTCAAGGTGACCATGCCCCACCGGGGTGCTGGGGC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCCATGGAGACTGTGCTTaGAAGGCACCCGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCHGDCA*KAPGTS
Trigger: ACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATG...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGGCCCAAGTGAGTTTTaGAAAAGGCAGAGCGACGGG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAGPSEF*KRQSDG
Trigger: CCCGTCGCTCTGCCTTTTCCAAAACTCACTTGGGCC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR CCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAATTGCAGGGAATGCAGTaGGACTTTAGGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWELQGMQ*DFRWHL
Trigger: CAGATGCCACCTAAAGTCCCACTGCATTCCCTGCAA...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR TCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATGGCCCCCTGGAGCTaGTTCCGCTGCGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCMAPWS*FRCDCH
Trigger: GTGGCAGTCGCAGCGGAATCAGCTCCAGGGGGCCAT...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAGAGGAATCTTTGGCTaGAGTGCTGCATGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTRGIFG*SAAWPP
Trigger: AGGGGGCCATGCAGCACTTCAGCCAAAGATTCCTCT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGGCGGCAGGTACCGGTaGCAAACTGCAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCGGRYR*QTAAAG
Trigger: TCCGGCTGCTGCAGTTTGTCACCGGTACCTGCCGCC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCCACACCTATGCAGAATaGACACTTTCCGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCHTYAE*TLSAGG
Trigger: CCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTG...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCGGGGCATGGTCACCTTaGAGATTTCAATATGACCTA +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGGAWSP*RFQYDL
Trigger: TAGGTCATATTGAAATCTTCAAGGTGACCATGCCCC...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAACGCACGAACACACATaGACACCCGTGAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTTHEHT*TPVSLM
Trigger: CATCAGGCTCACGGGTGTTCATGTGTGTTCGTGCGT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCACGCACGAACACACATaGACACCCGTGAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCTHEHT*TPVSLM
Trigger: CATCAGGCTCACGGGTGTTCATGTGTGTTCGTGCGT...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGGCTAGAGCTGGCAGATaGCATATCATCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGARAGR*HIITVK
Trigger: CTTCACGGTGATGATATGGCATCTGCCAGCTCTAGC...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACCTTTGTTCTCCGTCTaGAGGTTCAGGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTPLFSV*RFRVSC
Trigger: GCAGCTGACCCTGAACCTGCAGACGGAGAACAAAGG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp ACCAAACAGGGCACACGGGCTCTCCTAAGAGTCCCTACTTCCGACAGCCTTTCCCGCCTGAGACAACGCTaGCTTTGTTCTCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TKQGTRALLRVPTSDSLSRLRQR*LCSPSA
Trigger: TGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCG...GGAAAGGCTGTCGGAAGTAGGGACTCTTAGGAGAGCCCGTGTGCCCTGTTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCTCCGCGGTCGGACGCTaGCAGGTGGTGGTCCGAGTA +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCSAVGR*QVVVRV
Trigger: TACTCGGACCACCACCTGGCAGCGTCCGACCGCGGA...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAATCTTTGGCTGAAGTaGTGCATGGCCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTNLWLK*CMAPWS
Trigger: GCTCCAGGGGGCCATGCAGCACTTCAGCCAAAGATT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACCTCCCACTGGGTCGTaGGAGTGTTATGGTTCACGT +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTPPTGS*ECYGSR
Trigger: ACGTGAACCATAACACTCGCACGACCCAGTGGGAGG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTACTTCCACCGAAAACTaGGGTCATAAGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPATSTEN*GHKHQG
Trigger: CCCCTGGTGCTTATGACCGCAGTTTTCGGTGGAAGT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAACCACTCTCTGGCGATaGCCCCATAGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTTTLWR*PHSPGP
Trigger: AGGGCCTGGACTATGGGGGCATCGCCAGAGAGTGGT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTAGGAAGGCTTTGGTCTaGTCTTCCACGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPRKALV*SSTPRV
Trigger: CACCCGAGGCGTGGAAGAGCAGACCAAAGCCTTCCT...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAGTGCCGGTAGATGGTaGTCTTCTGCCAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTSAGRW*SSASRS
Trigger: TGAGCGACTGGCAGAAGAGCACCATCTACCGGCACT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCACCACTGGATCTGCTTaGTGTTCTTGGTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGTTGSA*CSWCSA
Trigger: GGCACTACACCAAGAACAGCAAGCAGATCCAGTGGT...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGTACCGGTGACAAACTaGAGCAGCCGGATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCVPVTN*SSRILF
Trigger: GAAGAGGATCCGGCTGCTGCAGTTTGTCACCGGTAC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGACAGGGGAGAGTTTTaGAGAGAGGGTCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTDRGEF*REGQPS
Trigger: AGAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGAGGTCTCCGGCCTCTaGGGCAGCCCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNEVSGL*GSPWGC
Trigger: GCATCCCCAGGGGCTGCCGCAGAGGCCGGAGACCTC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCAACCCCTCTCATTCTaGCAGGCTTGGGGACGAGGT +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPQPLSF*QAWGRG
Trigger: ACCTCGTCCCCAAGCCTGGCAGAATGAGAGGGGTTG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAACCTCACCAGCAGCTTaGACCCTGACCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTTSPAA*TLTHPG
Trigger: TCCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACACTGAGATCACGCCGCTaGACCCCAGCCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NKVPQKESREPAVDPLKTLRSRR*TPAWGR
Trigger: TCTCCCCCAGGCTGGGGTGCAGCGGCGTGATCTCAG...TGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCTCCTTCAGCCGGTGTaGCTGGGGCAGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHLLQPV*LGQGEK
Trigger: CTTCTCTCCCTGCCCCAGCCACACCGGCTGAAGGAG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp AGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGGCCTGGGCAGCCGCTaGGAGCTGCTGTGTACCCGA +
Preference number: 4 (lower is better)
Translates to: SLSLHKLRAGEVCIFYTGGLGSR*ELLCTR
Trigger: TCGGGTACACAGCAGCTCCCAGCGGCTGCCCAGGCC...TCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGACGCTGCCAGGTGGTaGTCCGAGTATTGTGATCCA +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCDAARW*SEYCDP
Trigger: TGGATCACAATACTCGGACCACCACCTGGCAGCGTC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACGGGGATCCTCCCACTaGGTCGTGCGAGTGTTATGG +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSARGSSH*VVRVLW
Trigger: CCATAACACTCGCACGACCCAGTGGGAGGATCCCCG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTATCGCACCCCCTCGCTaGTGTATTTCATCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAIAPPR*CISSPI
Trigger: GATGGGAGATGAAATACACCAGCGAGGGGGTGCGAT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGGTAGGGCATTTGAATaGCAGAGGAAACGGAACTGG +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGGRAFE*QRKRNW
Trigger: CCAGTTCCGTTTCCTCTGCCATTCAAATGCCCTACC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACATGTAGTGCCGGTAGATaGTGCTCTTCTGCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTCSAGR*CSSASR
Trigger: GCGACTGGCAGAAGAGCACCATCTACCGGCACTACA...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCTCTGCTTGCTGTTCTTaGTGTAGTGCCGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGSACCS*CSAGRW
Trigger: CCATCTACCGGCACTACACCAAGAACAGCAAGCAGA...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCAGCGAGATGACAGTGTaGTCCCACACAGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCSEMTV*SHTGPH
Trigger: ATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCT...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCACATACACCCAGGGTaGGGTCTAGAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGHIHPG*GLEDRG
Trigger: TCCCCTGTCCTCTAGACCCCACCCTGGGTGTATGTG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGCTGTTTTTGTCCCGTaGATACCCAGGCAGCTTAGA +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGAVFVP*IPRQLR
Trigger: TCTAAGCTGCCTGGGTATCCACGGGACAAAAACAGC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCATCATTCTGCCAGGCTTaGGGACGAGGTCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSASFCQA*GRGPCQ
Trigger: CTGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGA...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACCCTGTGTCCCGCCACTaGGGACTGCCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNPVSRH*GLPGGP
Trigger: GGGTCCCCCAGGCAGTCCCCAGTGGCGGGACACAGG...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGGAAGGTCGAGAATCTaGGAGCATGGAGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAGRSRI*EHGDCA
Trigger: AGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGAAGAGGCTGCGCTGTaGCAAGCTAAGCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAEEAAL*QAKPLK
Trigger: TTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCTATTGCACAAGAAACTaGCAATATCGAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGYCTRN*QYRGKG
Trigger: CCCCTTGCCTCGATATTGCCAGTTTCTTGTGCAATA...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTACTGTTTCATCTGCCGTaGCCACAGAAGCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: PVTRYPRRSLGNQLWILLLFHLP*PQKRRR
Trigger: TCGGCGCCGCTTCTGTGGCCACGGCAGATGAAACAG...TAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGCCATTGGGTGACTCATaGTGTCAGTTCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGPLGDS*CQFQSL
Trigger: GAGACTCTGGAACTGACACCATGAGTCACCCAATGG...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CAA 72 bp ACACCCAGGGTGGGGTCTAGAGGACAGGGGAGAGTTTaGCAGAGAGGGTCAGCCCTCTGGAACTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TPRVGSRGQGRV*QRGSALWNFAK
Trigger: CTTTGCAAAGTTCCAGAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTCCTCTAGACCCCACCCTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CAA 72 bp TGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATaGAAGGCGGCAAGGCTAGGAGTGGCGCTCGGGACC +
Preference number: 4 (lower is better)
Translates to: WGTLSSKGISSL*KAARLGVALGT
Trigger: GGTCCCGAGCGCCACTCCTAGCCTTGCCGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAAGGAAACGGAACTGGTaGTACTTCCACCGAAAACTG +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTARKRNW*YFHRKL
Trigger: CAGTTTTCGGTGGAAGTATCACCAGTTCCGTTTCCT...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGGGTTGAGCACCTCATaGGACAGGAGGAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTGLSTS*DRRKNH
Trigger: GTGGTTTTTCCTCCTGTCTCATGAGGTGCTCAACCC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGTGGAGGAGGCGGGGTTaGTCTGCAGGCAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGWRRRG*SAGSNC
Trigger: ACAATTACTGCCTGCAGATCAACCCCGCCTCCTCCA...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCTACATGGACAAAGTCTaGGGGAGTTTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGYMDKV*GSLLFL
Trigger: CAAAAACAGCAAACTCCCTCAGACTTTGTCCATGTA...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp ATTTGGGATTTGCTTCAAAATTACCTAGATCAGGGTGCGGCGGATAGGTTGGGGAGGCAGGGCCACTCCTaGCCGGCTAGAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: IWDLLQNYLDQGAADRLGRQGHS*PARAGR
Trigger: TCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCCT...CCCCAACCTATCCGCCGCACCCTGATCTAGGTAATTTTGAAGCAAATCCCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp CTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCTTTAGGGCCTTTGTTCTCCGTCTaGAGGTTCAGGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGGILTKPCRIRSTLPLGPLFSV*RFRVSC
Trigger: GCAGCTGACCCTGAACCTGCAGACGGAGAACAAAGG...CCCTAAAGGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCGCCTGAGACAACGCTaGCTTTGTTCTCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGRLRQR*LCSPSA
Trigger: TGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCCTCCCACTGGGTCGTaGGAGTGTTATGGTTCACGT +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGPPTGS*ECYGSR
Trigger: ACGTGAACCATAACACTCGCACGACCCAGTGGGAGG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGCACCAGGGGAACCTTaGTTCGTCCCCGACTCAAAC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTAPGEP*FVPDSN
Trigger: GTTTGAGTCGGGGACGAAGCAAGGTTCCCCTGGTGC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCGTGGGTCGTCACCTTaGCCAGTATCTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGRGSSP*PVSPCP
Trigger: AGGACATGGAGATACTGGGCAAGGTGACGACCCACG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGGCAGCCAGGTTTCCTTaGCAACTTTGTCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGAARFP*QLCQCK
Trigger: TTTGCATTGACAAAGTTGGCAAGGAAACCTGGCTGC...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGGGATCAGGCTTTTCTaGCAGCAGCGAGATGACAGT +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCGIRLF*QQRDDS
Trigger: ACTGTCATCTCGCTGCTGGCAGAAAAGCCTGATCCC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGAGGCAGAACCTCCTTTaGTGGCAAAGACCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGRQNLL*WQRPLA
Trigger: CGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCT...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGCTTCCCAGTCTTCTTaGTCTCACTGGGGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCASQSS*SHWGVH
Trigger: ATGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CCA 90 bp GACAGGCTGGGCATAGGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCAAAGCAGTTTGTGCTaGGGGGCTGGTGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: DRLGIGYGGMHQHSKSWPQSSLC*GAGAGS
Trigger: AGAACCGGCACCAGCCCCCCAGCACAAACTGCTTTG...AGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCCTATGCCCAGCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGGTTCTTCGGGATCAGTaGCTGTTGTGGGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGVLRDQ*LLWVHH
Trigger: ATGATGAACCCACAACAGCCACTGATCCCGAAGAAC...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCCTCCTTCAGCCGGTGTaGCTGGGGCAGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: HKLRAGEVCIFYTGALHGLLQPV*LGQGEK
Trigger: CTTCTCTCCCTGCCCCAGCCACACCGGCTGAAGGAG...GCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGCCGCTCCCAGGTGGTaGTCTTGGTATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPAAPRW*SWYCGQ
Trigger: TTGACCACAATACCAAGACCACCACCTGGGAGCGGC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGCGTTTTTCCCAGCCTaGAGGAAGGGGCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCAFFPA*RKGPLP
Trigger: TGGGAGCGGCCCCTTCCTCCAGGCTGGGAAAAACGC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGGGCCCAGGGGATCATaGTCAGTCGAAGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERGPRGS*SVEALE
Trigger: TTCGAGTGCTTCGACTGACCATGATCCCCTGGGCCC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAATCGCACCCCCTCGCTaGTGTATTTCATCTCCCATC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTIAPPR*CISSPI
Trigger: GATGGGAGATGAAATACACCAGCGAGGGGGTGCGAT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGGAAAAACCACTCTCTaGCGATGCCCCCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCGKTTL*RCPHSP
Trigger: TGGACTATGGGGGCATCGCCAGAGAGTGGTTTTTCC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTCGATGAACTTTCCATaGTACAGCGCCATGGCGATG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPASMNFP*YSAMAM
Trigger: CATCGCCATGGCGCTGTACCATGGAAAGTTCATCGA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCCAGGTCTTTCAGGGTTaGTCTCTTATTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGQVFQG*SLIEHP
Trigger: CGGATGCTCAATAAGAGACCAACCCTGAAAGACCTG...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGTGTAGTGCCGGTAGATaGTGCTCTTCTGCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGCSAGR*CSSASR
Trigger: GCGACTGGCAGAAGAGCACCATCTACCGGCACTACA...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGAATGCAAAACTTCTGTaGTCCGTTGCTACCGATGAG +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGNAKLL*SVATDE
Trigger: CTCATCGGTAGCAACGGACCACAGAAGTTTTGCATT...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAGCAGGTGTGGCTTCTaGGCAGCCAGGTTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSRCGF*AARFPC
Trigger: GCAAGGAAACCTGGCTGCCCAGAAGCCACACCTGCT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACGGTTGAAGCAGGTGTaGCTTCTGGGCAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSARLKQV*LLGSQV
Trigger: AACCTGGCTGCCCAGAAGCCACACCTGCTTCAACCG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACCTCAGCCTCCACCGCTaGCGCCTGCTAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNLSLHR*RLLGRQ
Trigger: CTGCCTCCCTAGCAGGCGCCAGCGGTGGAGGCTGAG...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPACLGNS*TQRSGS
Trigger: GGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGCACGGAACCGCCAGGTaGGTTCCTGAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVHGTAR*VPERRG
Trigger: GCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTG...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCCACTGGGGACTGCCTaGGGGACCCTATCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAPLGTA*GTLSSK
Trigger: TTTGCTAGATAGGGTCCCCCAGGCAGTCCCCAGTGG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTCAGGGCCTTTCTGCTaGTTTTCATGTCCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPASGPFC*FSCPVC
Trigger: GCACACAGGACATGAAAACCAGCAGAAAGGCCCTGA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGGGTCCTAGAATCCTaGGGGCCCAGGCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGVLES*GPRPGV
Trigger: GACTCCCGGCCTGGGCCCCCAGGATTCTAGGACCCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGCATGGAGACTGTGCTTaGAAGGCACCCGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERHGDCA*KAPGTS
Trigger: ACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATG...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCATGGAGACTGTGCTTaGAAGGCACCCGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAHGDCA*KAPGTS
Trigger: ACTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGTATTGCACAAGAAACTaGCAATATCGAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGYCTRN*QYRGKG
Trigger: CCCCTTGCCTCGATATTGCCAGTTTCTTGTGCAATA...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGACTGTGCTTGGAAGGCAAAAATGCCAATGACTaGCTTCCACATTTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PGRGKVENLGAWRLCLEGKNAND*LPHLSA
Trigger: AGCGCTCAAATGTGGAAGCCAGTCATTGGCATTTTT...GCCTTCCAAGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568684.1
3UTR CAA 72 bp CTGTCCCTGGCAGACAGGGAACCAAACCCCTTCTCCTaGAACTTGGACAGTCTTCCCTCTCTTGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSLADREPNPFS*NLDSLPSLGSL
Trigger: GAGGCTTCCAAGAGAGGGAAGACTGTCCAAGTTCAAGGAGAAGGGGTTTGGTTCCCTGTCTGCCAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp TGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCAGACGTTGGAGAGGTTaGCAGATGCGGTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: WITWRHSHEALPNKKHSARRWRG*QMRCLA
Trigger: TGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCT...GGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGTGGGGTTGTTCTGGCTaGAGCACCCGAATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAWGCSG*STRMSV
Trigger: CACAGACATTCGGGTGCTTCAGCCAGAACAACCCCA...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACAAGCCACTGTGGCCTaGGTTCTTGACGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAQATVA*VLDGLA
Trigger: CGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTAGGAAACGGAACTGGTaGTACTTCCACCGAAAACTG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPARKRNW*YFHRKL
Trigger: CAGTTTTCGGTGGAAGTATCACCAGTTCCGTTTCCT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACCTTGTTCTCCTCTGTaGCCCGGATGCTCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAPCSPL*PGCSRR
Trigger: GCGGCGAGAGCATCCGGGTCACAGAGGAGAACAAGG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGGCTGCACTCCATTCTaGACAGGGGACCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCGCTPF*TGDQQA
Trigger: GGCCTGTTGGTCCCCTGTTCAGAATGGAGTGCAGCC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCACGGAGGGCCCAAGTaGGTTTTGGAAAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAHGGPK*VLEKAE
Trigger: CTCTGCCTTTTCCAAAACTCACTTGGGCCCTCCGTG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR TCA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGGGAAAAGCAATCAAGTaGCCCGGAATAAACGTCACT +
Preference number: 4 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGGKAIK*PGINVT
Trigger: AGTGACGTTTATTCCGGGTCACTTGATTGCTTTTCC...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp TGTTCTCCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCGCTCAGAGCTCCCAATaGGCTTCCCAGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: CSPVTRYPRRSLGNQLWIAQSSQ*ASQSSW
Trigger: CCAAGAAGACTGGGAAGCGCATTGGGAGCTCTGAGC...GATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGCTGTGTACCCGAAGTaGTGGGTTCCTCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAAVYPK*WVPLLQ
Trigger: CTGAAGGAGAGGAACCCAGCACTTCGGGTACACAGC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACCTCCCACTGGGTCGTaGGAGTGTTATGGTTCACGT +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTPPTGS*ECYGSR
Trigger: ACGTGAACCATAACACTCGCACGACCCAGTGGGAGG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGAGTGCCGGTAGATGGTaGTCTTCTGCCAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERSAGRW*SSASRS
Trigger: TGAGCGACTGGCAGAAGAGCACCATCTACCGGCACT...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAGCCCTCTGGAACTTTaGAAAGGTGGGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSPLEL*KGGAKG
Trigger: GCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCAAGTCTGAGGGAGTTTaGTGTTTTTGTCCCGTGGAT +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGKSEGV*CFCPVD
Trigger: ATCCACGGGACAAAAACAGCAAACTCCCTCAGACTT...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCAAAGCCTCACACCTATaGAGAATGAACACTTTCCGC +
Preference number: 4 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGKASHL*RMNTFR
Trigger: GCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTT...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGAATCAGATGGGGCTATaGAGCAGCTCAGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGNQMGL*SSSGPF
Trigger: GAAAGGCCCTGAGCTGCTGCATAGCCCCATCTGATT...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGAGGCTGGCGGGAACTaGAGAAATCAGATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAEAGGN*RNQMGL
Trigger: TAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGAGGCTGGCGGGAACTaGAGAAATCAGATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTEAGGN*RNQMGL
Trigger: TAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACCAGTCCAAGGGGCTaGCTGGGGGTCCTAGAATCC +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCTSPRG*LGVLES
Trigger: GGATTCTAGGACCCCCAGGCAGCCCCTTGGACTGGT...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACCTCACCAGCAGCTTaGACCCTGACCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCTSPAA*TLTHPG
Trigger: TCCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGT...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGAGGTTCAGGGTCAGCTaGATGTTCTCCACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGRFRVS*MFSTFG
Trigger: CCCAAAGGTGGAGAACATGCAGCTGACCCTGAACCT...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356003.6
CDS-3UTR GCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAGCGCTTTGCAGGGAATaGAGTGGGACTTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAALCRE*SGTLGG
Trigger: GCCACCTAAAGTCCCACTGCATTCCCTGCAAAGCGC...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTTTGCTGGGGTTGTTCTaGCTGAAGCACCCGAATGTC +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPLLGLF*LKHPNV
Trigger: GACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAA...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CTCTCTCATCCTTTGGTTTTGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCTTGGCCAAGCCACTGTaGCCTGAGTTCTTGACGGGC +
Preference number: 4 (lower is better)
Translates to: LSHPLVLDNLAAFSRSPALAKPL*PEFLTG
Trigger: GCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAA...GGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGCATTCACTGTGCCATTaGCCAAGCCACTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GYGGMHQHSKSWPPMRLLHSLCH*PSHCGL
Trigger: CAGGCCACAGTGGCTTGGCCAATGGCACAGTGAATG...CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp AGGGACCGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCCAAGGGTGCAGCAGGTaGGGACGTCACACCAACAAC +
Preference number: 4 (lower is better)
Translates to: RDRFKKPLGDSWCQFQSLQGCSR*GRHTNN
Trigger: GTTGTTGGTGTGACGTCCCCACCTGCTGCACCCTTG...GAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCTTCAGCCGGTGTGGCTaGGGCAGGGAGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCFSRCG*GRERSR
Trigger: ACGACTTCTCTCCCTGCCCCAGCCACACCGGCTGAA...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LPPQKGTVSRSHWVTHGVNRHVR*AALAVP
Trigger: GGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATT...GACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGGCCGCTCCCAGGTGGTaGTCTTGGTATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GYGGMHQHSKSWPPMRLLAAPRW*SWYCGQ
Trigger: TTGACCACAATACCAAGACCACCACCTGGGAGCGGC...CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATCCTGGATCATCCCCTaGGTCCGGGGATCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYASWIIP*VRGSSH
Trigger: GTGGGAGGATCCCCGGACCCAGGGGATGATCCAGGA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTACGCTGATCTTCACGTaGCTAGGTAGGGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPATLIFT*LGRAFE
Trigger: TTCAAATGCCCTACCTAGCCACGTGAAGATCAGCGT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACATCCAGGAAGGCTTTaGTCTGCTCTTCCACGCCTC +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAHPGRL*SALPRL
Trigger: GAGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCATCCAGGAAGGCTTTaGTCTGCTCTTCCACGCCTC +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAHPGRL*SALPRL
Trigger: GAGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACATGTAGTGCCGGTAGATaGTGCTCTTCTGCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTCSAGR*CSSASR
Trigger: GCGACTGGCAGAAGAGCACCATCTACCGGCACTACA...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAAATGCAAAACTTCTGTaGTCCGTTGCTACCGATGAG +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTANAKLL*SVATDE
Trigger: CTCATCGGTAGCAACGGACCACAGAAGTTTTGCATT...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGGAACTTTGCAAAGGTaGGGCCAAAGGCAACTAGGG +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPGTLQR*GQRQLG
Trigger: CCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGCAGAACCTCCTTTGCTaGCAAAGACCCTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAQNLLC*QRPLAL
Trigger: GAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTG...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCCACTGGGGACTGCCTaGGGGACCCTATCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHPLGTA*GTLSSK
Trigger: TTTGCTAGATAGGGTCCCCCAGGCAGTCCCCAGTGG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TGTTCTCCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTGGGAAGCAGAGGTTaGAGTGAGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: CSPVTRYPRRSLGNQLWILGSRG*SELRSR
Trigger: GCGTGATCTCAGCTCACTCCAACCTCTGCTTCCCAG...GATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp ACCAAACAGGGCACACGGGCTCTCCTAAGAGTCCCTACTTCCGACAGCCTTTCCAGAACTTTCTGTCCCTaGCAGACAGGGAACCAAACC +
Preference number: 4 (lower is better)
Translates to: TKQGTRALLRVPTSDSLSRTFCP*QTGNQT
Trigger: GGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCT...GGAAAGGCTGTCGGAAGTAGGGACTCTTAGGAGAGCCCGTGTGCCCTGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CAA 72 bp GCTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATaGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ATSAERDRFKKP*GDSWCQFQSLR
Trigger: CCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAGAGGAATCTTTGGCTaGAGTGCTGCATGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHRGIFG*SAAWPP
Trigger: AGGGGGCCATGCAGCACTTCAGCCAAAGATTCCTCT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGGGTTGGTCTCTTATTaGGCATCCGCTTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTGLVSY*ASACRK
Trigger: CTTTCTACAAGCGGATGCTCAATAAGAGACCAACCC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGGCGGCAGGTACCGGTaGCAAACTGCAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEGGRYR*QTAAAG
Trigger: TCCGGCTGCTGCAGTTTGTCACCGGTACCTGCCGCC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCACACCTATGCAGAATaGACACTTTCCGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHHTYAE*TLSAGG
Trigger: CCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGTTTCAATATGACCTATaGAGATTCCAGTTACGGCAG +
Preference number: 4 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGFQYDL*RFQLRQ
Trigger: CTGCCGTAACTGGAATCTTCATAGGTCATATTGAAA...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAATCTCCAATTCTTTTCTaGGTGAGTCTGCTGCTATTT +
Preference number: 4 (lower is better)
Translates to: PELTEPPGGFLRGVAVWESPILF*VSLLLF
Trigger: AAATAGCAGCAGACTCACTCAGAAAAGAATTGGAGA...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356003.6
CDS-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACGAGCACCGGGGCTTTaGTCGCCGGTTGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAERAPGL*SPVAGV
Trigger: AACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCGTGGGTCGTCACCTTaGCCAGTATCTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHRGSSP*PVSPCP
Trigger: AGGACATGGAGATACTGGGCAAGGTGACGACCCACG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGCTCATGTCTATCTCCTaGATGCCGCACAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERLMSIS*MPHSIS
Trigger: GCTGATGCTGTGCGGCATGCAGGAGATAGACATGAG...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGATCTCCTTCACCACCTaGCAGAACCACTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERISFTT*QNHWIC
Trigger: GCAGATCCAGTGGTTCTGGCAGGTGGTGAAGGAGAT...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGTACCGGTGACAAACTaGAGCAGCCGGATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHVPVTN*SSRILF
Trigger: GAAGAGGATCCGGCTGCTGCAGTTTGTCACCGGTAC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAGCCCTCTGGAACTTTaGAAAGGTGGGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHSPLEL*KGGAKG
Trigger: GCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGGCCGGCATGTGTCCTaGGACTCAGCCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEGRHVS*DSASTA
Trigger: AGCGGTGGAGGCTGAGTCGCAGGACACATGCCGGCC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGAATCAGATGGGGCTATaGAGCAGCTCAGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKANQMGL*SSSGPF
Trigger: GAAAGGCCCTGAGCTGCTGCATAGCCCCATCTGATT...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGTCTGCCATGACTACTaGCCCAGCACCCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEVCHDY*PSTPVG
Trigger: CCCCACCGGGGTGCTGGGGCAGTAGTCATGGCAGAC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAACCTCACCAGCAGCTTaGACCCTGACCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYATSPAA*TLTHPG
Trigger: TCCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGT...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTACTTTAGGTGGCATCTaGTCCTCTCAAAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPATLGGI*SSQKSL
Trigger: CAGAGACTTTTGAGAGGAGCAGATGCCACCTAAAGT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR GCA 90 bp GAAGCCCTGCCGAATAAGAAGCACTCTGCCTTTAGGGACAGGCTGGGCATAGGGATTCTCACGAAGCCCTaGCGAATAAGAAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: EALPNKKHSAFRDRLGIGILTKP*RIRSTL
Trigger: CAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAAT...CCCTATGCCCAGCCTGTCCCTAAAGGCAGAGTGCTTCTTATTCGGCAGGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAGCTTCCCAGTCTTCTTaGTCTCACTGGGGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: PVTRYPRRSLGNQLWILLASQSS*SHWGVH
Trigger: ATGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGC...TAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp GACAGGCTGGGCATAGGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCTACTGCTGTTCCACTaGAGTCTCTCGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DRLGIGYGGMHQHSKSWPLLLFH*SLSKAA
Trigger: AGCTGCCTTCGAGAGACTCCAGTGGAACAGCAGTAG...AGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCCTATGCCCAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCTGGTGCCGGTTCTCTaGAGCTACTGCTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHLVPVL*SYCCST
Trigger: AGTGGAACAGCAGTAGCTCCAGAGAACCGGCACCAG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GACAGGCTGGGCATAGGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTTTGCTGGGGTTGTTCTaGCTGAAGCACCCGAATGTC +
Preference number: 4 (lower is better)
Translates to: DRLGIGYGGMHQHSKSWPLLGLF*LKHPNV
Trigger: GACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAA...AGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCCTATGCCCAGCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGGGGCCGCTCCCAGGTaGTGGTCTTGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAGAAPR*WSWYCG
Trigger: ACCACAATACCAAGACCACCACCTGGGAGCGGCCCC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACTCGGACGCTGCCAGGTaGTGGTCCGAGTATTGTGAT +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHSDAAR*WSEYCD
Trigger: ATCACAATACTCGGACCACCACCTGGCAGCGTCCGA...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATCCTGGGGGCAGAGCTaGTTCCTGGATCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYASWGQS*FLDHPL
Trigger: CAGGGGATGATCCAGGAACCAGCTCTGCCCCCAGGA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGTTGGACCCAAAGGTCTaGGTCCCTCAAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKALDPKV*VPQGLR
Trigger: TCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTTGTTTGGGAAACTCTTaGACCCAAAGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPCLGNS*TQRSGS
Trigger: GGACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACA...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGACTGCAGAAATCAGATaGGGCTATGCAGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGTAEIR*GYAAAQ
Trigger: CTGAGCTGCTGCATAGCCCCATCTGATTTCTGCAGT...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGAAGAGGCTGCGCTGTaGCAAGCTAAGCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAEEAAL*QAKPLK
Trigger: TTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ATTTGGGATTTGCTTCAAAATTACCTAGATCAGGGTGCGGCGGATAGGTTGGGGGTTGATGACCTACCCTaGAGGAAGGGGCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: IWDLLQNYLDQGAADRLGVDDLP*RKGPLP
Trigger: TGGGAGCGGCCCCTTCCTCCAGGGTAGGTCATCAAC...CCCCAACCTATCCGCCGCACCCTGATCTAGGTAATTTTGAAGCAAATCCCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp ACCAAACAGGGCACACGGGCTCTCCTAAGAGTCCCTACTTCCGACAGCCTTTCCTGGTTTTGGATAACTTaGCGGCATTCTCACGAAGCC +
Preference number: 4 (lower is better)
Translates to: TKQGTRALLRVPTSDSLSWFWIT*RHSHEA
Trigger: GGCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCA...GGAAAGGCTGTCGGAAGTAGGGACTCTTAGGAGAGCCCGTGTGCCCTGTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CAA 72 bp ATCATCAGAGAGGCTCAATTACAGGCAGAACCTCCTTaGCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: IIREAQLQAEPP*LAKTLGALSPE
Trigger: TTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTGTAATTGAGCCTCTCTGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCTGGAGGAGGCGGGGTTaGTCTGCAGGCAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCWRRRG*SAGSNC
Trigger: ACAATTACTGCCTGCAGATCAACCCCGCCTCCTCCA...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGGGTTGGTCTCTTATTaGGCATCCGCTTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGGLVSY*ASACRK
Trigger: CTTTCTACAAGCGGATGCTCAATAAGAGACCAACCC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACCTTCCACGCCTCGGGTaGAACGCCAGTCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNLPRLG*NASQSA
Trigger: TGCTGACTGACTGGCGTTTCACCCGAGGCGTGGAAG...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCCACACCTATGCAGAATaGACACTTTCCGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCHTYAE*TLSAGG
Trigger: CCCGCCAGCGGAAAGTGTTCATTCTGCATAGGTGTG...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGGGAAGTACAGCAAATaGCTGAAAGGGACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPGKYSK*LKGTEE
Trigger: CTCTTCTGTCCCTTTCAGTCATTTGCTGTACTTCCC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACACTGGCTTCCACATTTaGGCGCTTTGCAGGGAATGC +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHTGFHI*ALCREC
Trigger: GCATTCCCTGCAAAGCGCTCAAATGTGGAAGCCAGT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR TCA 90 bp TGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCGCCATATCATCACCGTaGAGCTGGTGGAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: WITWRHSHEALPNKKHSAAISSP*SWWKRS
Trigger: ACTTCTCTTCCACCAGCTTCACGGTGATGATATGGC...GGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp GGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGGAATACATCCCCTTTTaGAAGCTCTCGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: GYGGMHQHSKSWPPMRLLEYIPF*KLSGPG
Trigger: TCCTGGTCCCGAGAGCTTTCAAAAGGGGATGTATTC...CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp TGCATGTTCTCCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGCTAGAGCTGGCAGATaGCATATCATCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: CMFSSNKVPQKESREPAVARAGR*HIITVK
Trigger: CTTCACGGTGATGATATGGCATCTGCCAGCTCTAGC...CACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGGAGAACATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCCGCCTGAGACAACGCTaGCTTTGTTCTCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCRLRQR*LCSPSA
Trigger: TGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCG...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGTTCATCATTCACTGTaGCATTGGCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPVHHSL*HWPSHC
Trigger: ACAGTGGCTTGGCCAATGGCACAGTGAATGATGAAC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTTCTTCGAAAAGCGTCTaGCTGGAAACGCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPSSKSV*LETLIF
Trigger: GAAGATCAGCGTTTCCAGGCAGACGCTTTTCGAAGA...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCAACCACTGGATCTGCTTaGTGTTCTTGGTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: LKGTEEAALWQAKPLKSATTGSA*CSWCSA
Trigger: GGCACTACACCAAGAACAGCAAGCAGATCCAGTGGT...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCAAGTCTGAGGGAGTTTaGTGTTTTTGTCCCGTGGAT +
Preference number: 4 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCKSEGV*CFCPVD
Trigger: ATCCACGGGACAAAAACAGCAAACTCCCTCAGACTT...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAAAGCCTCACACCTATaGAGAATGAACACTTTCCGC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTKASHL*RMNTFR
Trigger: GCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCTTTAGGGAGGGCAGGGGAAGTGTaGATATTTTATACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGGILTKPCRIRSTLPLGRAGEV*IFYTGA
Trigger: GGCTCCTGTATAAAATATGCACACTTCCCCTGCCCT...CCCTAAAGGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGACGATTATGCACCTTaGGCTTTGCGGACACCACTT +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERDDYAP*ALRTPL
Trigger: AAGTGGTGTCCGCAAAGCCCAAGGTGCATAATCGTC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CCA 90 bp CGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTCTGGTGCCGGTTCTCTaGAGCTACTGCTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: RFKKPLGDSWCQFQSLRSLVPVL*SYCCST
Trigger: AGTGGAACAGCAGTAGCTCCAGAGAACCGGCACCAG...AGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACTTCAGCCGGTGTGGCTaGGGCAGGGAGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNFSRCG*GRERSR
Trigger: ACGACTTCTCTCCCTGCCCCAGCCACACCGGCTGAA...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGCCGCTCCCAGGTGGTaGTCTTGGTATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCAAPRW*SWYCGQ
Trigger: TTGACCACAATACCAAGACCACCACCTGGGAGCGGC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCTTTCATCTCCCATCCTaGGGGCAGAGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCFHLPS*GQSWFL
Trigger: CAGGAACCAGCTCTGCCCCCAGGATGGGAGATGAAA...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGTAGCTCTTGTAGGGTaGAAGATCCAGACGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGVALVG*KIQTVE
Trigger: TTCAACCGTCTGGATCTTCCACCCTACAAGAGCTAC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCCTCGGTCTCCTCAATaGCATACAGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHPRSPQ*HTAASL
Trigger: GAGAGAAGCTGCTGTATGCCATTGAGGAGACCGAGG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACTCTGCGGCAGCCCCTaGGGATGCAACACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAELCGSP*GCNTFP
Trigger: AGGGAAGGTGTTGCATCCCCAGGGGCTGCCGCAGAG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGTGGGGTGCCAGCTCCTaGACAGAAAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVWGASS*TESDSS
Trigger: GCTGCTGTCACTTTCTGTCCAGGAGCTGGCACCCCA...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACATCAGGGCCTTTCTGCTaGTTTTCATGTCCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSGPFC*FSCPVC
Trigger: GCACACAGGACATGAAAACCAGCAGAAAGGCCCTGA...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGACTGCAGAAATCAGATaGGGCTATGCAGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERTAEIR*GYAAAQ
Trigger: CTGAGCTGCTGCATAGCCCCATCTGATTTCTGCAGT...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACCCCGTGTTGGAGGCTaGCGGGAACTGCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAPRVGG*RELQKS
Trigger: TGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGAAGAGGCTGCGCTGTaGCAAGCTAAGCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHEEAAL*QAKPLK
Trigger: TTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACTCTCTTCCCTGCCATaGATCTCTCCAATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTLSSLP*ISPILF
Trigger: GAAAAGAATTGGAGAGATCCATGGCAGGGAAGAGAG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356003.6
CDS-3UTR TCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTACTTTCAAAGTGAGCTaGGACTTCTCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPTFKVS*DFSKGR
Trigger: CCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGT...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR TCA 90 bp CCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACAAAAGACGTTGGAGAGGTTaGCAGATGCGGTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: PQKESREPAVDPLKTRYKRRWRG*QMRCLA
Trigger: TGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCT...TTTGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR TCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATGTCAGCTCTCCGCCTaGGACAACGCTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYACQLSA*DNAAFV
Trigger: AACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATGGGGTTGTTCTGGCTaGAGCACCCGAATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAWGCSG*STRMSV
Trigger: CACAGACATTCGGGTGCTTCAGCCAGAACAACCCCA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR TCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCCAGGTTGTTCTCTTTaGTCCAGACAATGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPPGCSL*SRQWSC
Trigger: ACAACTCCATTGTCTGGATCAAAGAGAACAACCTGG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTTTCAATATGACCTATaGAGATTCCAGTTACGGCAG +
Preference number: 4 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAFQYDL*RFQLRQ
Trigger: CTGCCGTAACTGGAATCTTCATAGGTCATATTGAAA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGGGAAGTACAGCAAATaGCTGAAAGGGACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERGKYSK*LKGTEE
Trigger: CTCTTCTGTCCCTTTCAGTCATTTGCTGTACTTCCC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TGCATGTTCTCCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGCCATATCATCACCGTaGAGCTGTAATCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: CMFSSNKVPQKESREPAVAISSP*SCNPRY
Trigger: ATACCTGGGATTACAGCTTCACGGTGATGATATGGC...CACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGGAGAACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR GCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGTTCATCATTCACTGTaGCATTGGCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTVHHSL*HWPSHC
Trigger: ACAGTGGCTTGGCCAATGGCACAGTGAATGATGAAC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGGGATCAGGCTTTTCTaGCAGCAGCGAGATGACAGT +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCGIRLF*QQRDDS
Trigger: ACTGTCATCTCGCTGCTGGCAGAAAAGCCTGATCCC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGACAGGGGAGAGTTTTaGAGAGAGGGTCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVDRGEF*REGQPS
Trigger: AGAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTAAGTCTGAGGGAGTTTaGTGTTTTTGTCCCGTGGAT +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPKSEGV*CFCPVD
Trigger: ATCCACGGGACAAAAACAGCAAACTCCCTCAGACTT...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTGCTTCCCAGTCTTCTTaGTCTCACTGGGGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: RFKKPLGDSWCQFQSLRSASQSS*SHWGVH
Trigger: ATGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGC...AGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACATCCCAGATCAACAGTTaGCCCGTCCAGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSQINS*PVQENC
Trigger: ACAATTTTCCTGGACGGGCCAACTGTTGATCTGGGA...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACCAAAGCAGTTTGTGCTaGGGGGCTGGTGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNQSSLC*GAGAGS
Trigger: AGAACCGGCACCAGCCCCCCAGCACAAACTGCTTTG...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGCATTCACTGTGCCATTaGCCAAGCCACTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVHSLCH*PSHCGL
Trigger: CAGGCCACAGTGGCTTGGCCAATGGCACAGTGAATG...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGATCAGTGGCTGTTGTaGGTTCATCATTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERDQWLL*VHHSLC
Trigger: GCACAGTGAATGATGAACCCACAACAGCCACTGATC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCGATCAGTGGCTGTTGTaGGTTCATCATTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LPPQKGTVSRSHWVTHGVDQWLL*VHHSLC
Trigger: GCACAGTGAATGATGAACCCACAACAGCCACTGATC...GACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGTTCTTCGGGATCAGTaGCTGTTGTGGGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTVLRDQ*LLWVHH
Trigger: ATGATGAACCCACAACAGCCACTGATCCCGAAGAAC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGTGTACCCGAAGTGCTaGGTTCCTCTCCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNVYPKC*VPLLQP
Trigger: CGGCTGAAGGAGAGGAACCCAGCACTTCGGGTACAC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGTTTCATCTCCCATCCTaGGGGCAGAGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVFHLPS*GQSWFL
Trigger: CAGGAACCAGCTCTGCCCCCAGGATGGGAGATGAAA...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATTTCATCTCCCATCCTaGGGGCAGAGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAFHLPS*GQSWFL
Trigger: CAGGAACCAGCTCTGCCCCCAGGATGGGAGATGAAA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGACGCTGATCTTCACGTaGCTAGGTAGGGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: GAASMVTCHREVQQMTERTLIFT*LGRAFE
Trigger: TTCAAATGCCCTACCTAGCCACGTGAAGATCAGCGT...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACTCGATGAACTTTCCATaGTACAGCGCCATGGCGATG +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHSMNFP*YSAMAM
Trigger: CATCGCCATGGCGCTGTACCATGGAAAGTTCATCGA...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAGTATCTCCATGTCCTaGATGAAGTACAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSISMS*MKYSSR
Trigger: CCTGGAGCTGTACTTCATCCAGGACATGGAGATACT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGTAGCTCTTGTAGGGTaGAAGATCCAGACGGTTGAA +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTVALVG*KIQTVE
Trigger: TTCAACCGTCTGGATCTTCCACCCTACAAGAGCTAC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACCCCCGTGTTGGAGGCTaGCGGGAACTGCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNPRVGG*RELQKS
Trigger: TGATTTCTGCAGTTCCCGCCAGCCTCCAACACGGGG...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCTTTAGGGGTTTCAAGAAGCCATTaGGTGACTCATGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LGGILTKPCRIRSTLPLGVSRSH*VTHGVS
Trigger: ACTGACACCATGAGTCACCCAATGGCTTCTTGAAAC...CCCTAAAGGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGACACCACTTTCAAAGTaGGCTGAGACTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGTPLSK*AETSQK
Trigger: CTTTTGAGAAGTCTCAGCTCACTTTGAAAGTGGTGT...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR TCA 90 bp GGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTTGGGGTTGTTCTGGCTaGAGCACCCGAATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GKCAYFIQEPFMATLLGGWGCSG*STRMSV
Trigger: CACAGACATTCGGGTGCTTCAGCCAGAACAACCCCA...ACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGGGTTGAGCACCTCATaGGACAGGAGGAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVGLSTS*DRRKNH
Trigger: GTGGTTTTTCCTCCTGTCTCATGAGGTGCTCAACCC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGTACATGGACAAAGTCTaGGGGAGTTTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGYMDKV*GSLLFL
Trigger: CAAAAACAGCAAACTCCCTCAGACTTTGTCCATGTA...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACACGCACGAACACACATaGACACCCGTGAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNTHEHT*TPVSLM
Trigger: CATCAGGCTCACGGGTGTTCATGTGTGTTCGTGCGT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGATCTCCTTCACCACCTaGCAGAACCACTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVISFTT*QNHWIC
Trigger: GCAGATCCAGTGGTTCTGGCAGGTGGTGAAGGAGAT...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGAAAGCCTCACACCTATaGAGAATGAACACTTTCCGC +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAKASHL*RMNTFR
Trigger: GCGGAAAGTGTTCATTCTGCATAGGTGTGAGGCTTT...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCACTGCTGATTGTTTATTaGACAAGAAACTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTALLIVY*TRNWQY
Trigger: ATATTGCCAGTTTCTTGTGCAATAAACAATCAGCAG...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACAAGGGTGCAGCAGGTaGGGACGTCACACCAACAAC +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEQGCSR*GRHTNN
Trigger: GTTGTTGGTGTGACGTCCCCACCTGCTGCACCCTTG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGGAGAGAAGTCGTGTTaGGATTCGGGGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVGEKSC*DSGSHS
Trigger: TGAGTGTGACCCCGAATCCCAACACGACTTCTCTCC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp TCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGGAGAGAAGTCGTGTTaGGATTCGGGGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: STNSGQGKCAYFIQEPFMGEKSC*DSGSHS
Trigger: TGAGTGTGACCCCGAATCCCAACACGACTTCTCTCC...CATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp ATGGCTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTTGGGGCCGCTCCCAGGTaGTGGTCTTGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: MATLLGGDSFLEQNTSPFGAAPR*WSWYCG
Trigger: ACCACAATACCAAGACCACCACCTGGGAGCGGCCCC...AAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGTGGTGCGGGTATTGTaGTCCACAAAGTATCGCACC +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAVVRVL*STKYRT
Trigger: GGTGCGATACTTTGTGGACCACAATACCCGCACCAC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACAGCGAGATGACAGTGTaGTCCCACACAGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNSEMTV*SHTGPH
Trigger: ATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAGGCGTGGCTGTTTaGGAAACTCTTGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: GLSAGFHVLCADKASHLCRGVAV*ETLGPK
Trigger: TTTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCT...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGATGAACACTTTCCGCTaGCGGGCTGCACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVMNTFR*RAALHS
Trigger: AGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCAT...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGTATTGCACAAGAAACTaGCAATATCGAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAYCTRN*QYRGKG
Trigger: CCCCTTGCCTCGATATTGCCAGTTTCTTGTGCAATA...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTCTCTCATCCTTTGGTTTTGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCGCCTCTCTCATCCTTTaGTTTTGGATAACTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSHPLVLDNLAAFSRSPAASLIL*FWITWR
Trigger: CCGCCAAGTTATCCAAAACCAAAGGATGAGAGAGGC...GGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGGTTGAGCACCTCATaGGACAGGAGGAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGLSTS*DRRKNH
Trigger: GTGGTTTTTCCTCCTGTCTCATGAGGTGCTCAACCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCCAGGTTGTTCTCTTTaGTCCAGACAATGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHPGCSL*SRQWSC
Trigger: ACAACTCCATTGTCTGGATCAAAGAGAACAACCTGG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGGGGCATGGTCACCTTaGAGATTTCAATATGACCTA +
Preference number: 4 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHGAWSP*RFQYDL
Trigger: TAGGTCATATTGAAATCTTCAAGGTGACCATGCCCC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp TCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGCAAGAAGCCATTGGGTaGCTCATGGTGTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: STNSGQGKCAYFIQEPFMQEAIG*LMVSVP
Trigger: TGGAACTGACACCATGAGTCACCCAATGGCTTCTTG...CATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTTGAAACACACGCCTGACAGCTaGACCAAACAGGGCACACGG +
Preference number: 4 (lower is better)
Translates to: LLYWEVILSWSRIHPLLKHTPDS*TKQGTR
Trigger: CCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTG...TTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCGATGATGACAGGTTATaGGTTTCATCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HKLRAGEVCIFYTGALHGDDDRL*VSSSRR
Trigger: CCTCCTGGAGGATGAAACTCATAACCTGTCATCATC...GCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACCACATAGTAAAACCTaGCTCGGGGATCTGTGCGTT +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAPHSKT*LGDLCV
Trigger: AACGCACAGATCCCCGAGGCAGGTTTTACTATGTGG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR GCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACATCTCCTTCACCACCTaGCAGAACCACTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNISFTT*QNHWIC
Trigger: GCAGATCCAGTGGTTCTGGCAGGTGGTGAAGGAGAT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGTACCGGTGACAAACTaGAGCAGCCGGATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEVPVTN*SSRILF
Trigger: GAAGAGGATCCGGCTGCTGCAGTTTGTCACCGGTAC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACAATCAGATGGGGCTATaGAGCAGCTCAGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNNQMGL*SSSGPF
Trigger: GAAAGGCCCTGAGCTGCTGCATAGCCCCATCTGATT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGAGGCTGGCGGGAACTaGAGAAATCAGATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEEAGGN*RNQMGL
Trigger: TAGCCCCATCTGATTTCTGCAGTTCCCGCCAGCCTC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTGACGATTATGCACCTTaGGCTTTGCGGACACCACTT +
Preference number: 4 (lower is better)
Translates to: VSRSHWVTHGVSSRVSGLDDYAP*ALRTPL
Trigger: AAGTGGTGTCCGCAAAGCCCAAGGTGCATAATCGTC...AAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACAAAGGACGATTATGCACCTTaGGCTTTGCGGACACCACTT +
Preference number: 4 (lower is better)
Translates to: PRRSLGNQLWILLKQDTKDDYAP*ALRTPL
Trigger: AAGTGGTGTCCGCAAAGCCCAAGGTGCATAATCGTC...CTTTGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAATCTTCTTGGTCTCACTaGGGAGTCCATCCACCGCCA +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAESSWSH*GVHPPP
Trigger: TGGCGGTGGATGGACTCCCCAGTGAGACCAAGAAGA...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACTGGTGCCGGTTCTCTaGAGCTACTGCTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAELVPVL*SYCCST
Trigger: AGTGGAACAGCAGTAGCTCCAGAGAACCGGCACCAG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATCGATGAACTTTCCATaGTACAGCGCCATGGCGATG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYASMNFP*YSAMAM
Trigger: CATCGCCATGGCGCTGTACCATGGAAAGTTCATCGA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGAGAACTCAGGGTCAATaGACTCCAGGTCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVRTQGQ*TPGLSG
Trigger: CCCTGAAAGACCTGGAGTCCATTGACCCTGAGTTCT...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAACAGAACCTCCTTTGCTaGCAAAGACCCTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEQNLLC*QRPLAL
Trigger: GAGCGCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTG...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGCTGTTTTTGTCCCGTaGATACCCAGGCAGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVAVFVP*IPRQLR
Trigger: TCTAAGCTGCCTGGGTATCCACGGGACAAAAACAGC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACTTCAAGTTTATACATaGACAAAGTCTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTLQVYT*TKSEGV
Trigger: AACTCCCTCAGACTTTGTCCATGTATAAACTTGAAG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACTTGGACCCAAAGGTCTaGGTCCCTCAAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNLDPKV*VPQGLR
Trigger: TCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGAAGGTCGAGAATCTaGGAGCATGGAGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGRSRI*EHGDCA
Trigger: AGCACAGTCTCCATGCTCCCAGATTCTCGACCTTCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGGAGGTGATTCTTTCTTaGAGCAGAATACATCCCCTT +
Preference number: 4 (lower is better)
Translates to: GYGGMHQHSKSWPPMRLLEVILS*SRIHPL
Trigger: AAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTC...CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTTACAGGAGCCCTTCATaGCTACTTTACTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSRSHWVTHGVSSRVSGLYRSPS*LLYWEV
Trigger: CACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTA...AAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCACTTTCAAAGTGAGCTaGGACTTCTCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HKLRAGEVCIFYTGALHGTFKVS*DFSKGR
Trigger: CCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGT...GCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACAAAGGAGTTAATTCGAGGTTaGCGATTATGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PRRSLGNQLWILLKQDTKELIRG*RLCTLG
Trigger: GCCCAAGGTGCATAATCGTCAACCTCGAATTAACTC...CTTTGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR TCA 90 bp ATGGCTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTTTGTCAGCTCTCCGCCTaGGACAACGCTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: MATLLGGDSFLEQNTSPFCQLSA*DNAAFV
Trigger: AACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACA...AAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAAGGAAACGGAACTGGTaGTACTTCCACCGAAAACTG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYARKRNW*YFHRKL
Trigger: CAGTTTTCGGTGGAAGTATCACCAGTTCCGTTTCCT...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp GGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTCAAACCCCTTCTCCTTaGACTTGGACAGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GKCAYFIQEPFMATLLGGQTPSP*TWTVFP
Trigger: AGGGAAGACTGTCCAAGTTCAAGGAGAAGGGGTTTG...ACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATCTTCGAAAAGCGTCTaGCTGGAAACGCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYASSKSV*LETLIF
Trigger: GAAGATCAGCGTTTCCAGGCAGACGCTTTTCGAAGA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAATGTCTATCTCCTGCATaGCGCACAGCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAECLSPA*RTASAP
Trigger: TGGAGCTGATGCTGTGCGGCATGCAGGAGATAGACA...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACTGCTGATTGTTTATTaGACAAGAAACTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTLLIVY*TRNWQY
Trigger: ATATTGCCAGTTTCTTGTGCAATAAACAATCAGCAG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACAGGTCTTTCAGGGTTaGTCTCTTATTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAQVFQG*SLIEHP
Trigger: CGGATGCTCAATAAGAGACCAACCCTGAAAGACCTG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACAGAACTCAGGGTCAATaGACTCCAGGTCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNRTQGQ*TPGLSG
Trigger: CCCTGAAAGACCTGGAGTCCATTGACCCTGAGTTCT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGAGTATCTCCATGTCCTaGATGAAGTACAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVSISMS*MKYSSR
Trigger: CCTGGAGCTGTACTTCATCCAGGACATGGAGATACT...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp GTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACCTCGGGAACCAGCTGTaGATCCTCTTAAAACAAGAT +
Preference number: 4 (lower is better)
Translates to: VPQKESREPAVDPLKTRYLGNQL*ILLKQD
Trigger: ATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAG...GTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp GACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTTCCTCATCCTTTGGTTTTaGATAACTTGGCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: DTCGKNFLSLADREPNPFLILWF*ITWRHS
Trigger: AGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAG...GAAGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp ATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGTTTCCCAGAGATGAGTTAATTCGAGGTTaGCGATTATGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: MHQHSKSWPPMRLLFPRDELIRG*RLCTLG
Trigger: GCCCAAGGTGCATAATCGTCAACCTCGAATTAACTC...ATCTCTGGGAAACAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp GACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTTCACCTTTAAATCTAAATaGCTCTGTGCCGTGACATTC +
Preference number: 4 (lower is better)
Translates to: DTCGKNFLSLADREPNPFTFKSK*LCAVTF
Trigger: GAATGTCACGGCACAGAGTCATTTAGATTTAAAGGT...GAAGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp CTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTTGAAAGCTCAGAGCTCCCAATaGGCTTCCCAGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLYWEVILSWSRIHPLLKAQSSQ*ASQSSW
Trigger: CCAAGAAGACTGGGAAGCGCATTGGGAGCTCTGAGC...TTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp CTGCAATTACTCAACTCTGCCAATGAAGTACAAAAACAGCCAAAAACAATAAGTGCAGCCGCTGGGAGCTaGTGTGTACCCGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LQLLNSANEVQKQPKTISAAAGS*CVPEVL
Trigger: CAGCACTTCGGGTACACAGCAGCTCCCAGCGGCTGC...ACTTATTGTTTTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGTAATTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGCAGCCAGGTTTCCTTaGCAACTTTGTCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVAARFP*QLCQCK
Trigger: TTTGCATTGACAAAGTTGGCAAGGAAACCTGGCTGC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR GCA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCTGCTGATTGTTTATTaGACAAGAAACTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPLLIVY*TRNWQY
Trigger: ATATTGCCAGTTTCTTGTGCAATAAACAATCAGCAG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGGTAGGGCATTTGAATaGCAGAGGAAACGGAACTGG +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEGRAFE*QRKRNW
Trigger: CCAGTTCCGTTTCCTCTGCCATTCAAATGCCCTACC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACACGCTGATCTTCACGTaGCTAGGTAGGGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNTLIFT*LGRAFE
Trigger: TTCAAATGCCCTACCTAGCCACGTGAAGATCAGCGT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAATGTTCATGATCTGTTaGAAGGAATCTTCGAAAAGC +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTMFMIC*KESSKS
Trigger: GCTTTTCGAAGATTCCTTCCAACAGATCATGAACAT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACAGTATCTCCATGTCCTaGATGAAGTACAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNSISMS*MKYSSR
Trigger: CCTGGAGCTGTACTTCATCCAGGACATGGAGATACT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAATCTGCTTGCTGTTCTTaGTGTAGTGCCGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAESACCS*CSAGRW
Trigger: CCATCTACCGGCACTACACCAAGAACAGCAAGCAGA...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACTTCAAGTTTATACATaGACAAAGTCTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTLQVYT*TKSEGV
Trigger: AACTCCCTCAGACTTTGTCCATGTATAAACTTGAAG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp AGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAAAAGCAGCCCATCCATaGAGAATTATGGGACCAGAA +
Preference number: 4 (lower is better)
Translates to: SLSLHKLRAGEVCIFYTGKAAHP*RIMGPE
Trigger: TTCTGGTCCCATAATTCTCCATGGATGGGCTGCTTT...TCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CAA 72 bp GAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTaGAAAGCTCTCGGGACCAGGAGACACATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EVILSWSRIHPL*KALGTRRHMWK
Trigger: TTTCCACATGTGTCTCCTGGTCCCGAGAGCTTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
3UTR CAA 72 bp CCCTTCATGGCTACTTTACTGGGAGGTGATTCTTTCTaGGAGCAGAATACATCCCCTTTTGAAAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PFMATLLGGDSF*EQNTSPFESSR
Trigger: CCGAGAGCTTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCATGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACCCAGGTTGTTCTCTTTaGTCCAGACAATGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNPGCSL*SRQWSC
Trigger: ACAACTCCATTGTCTGGATCAAAGAGAACAACCTGG...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR TCA 90 bp ATTTGGGATTTGCTTCAAAATTACCTAGATCAGGGTGCGGCGGATAGGTTGGGGTACTTTACTGGGAGGTaGTTCTTTCTTGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: IWDLLQNYLDQGAADRLGYFTGR*FFLGAE
Trigger: TTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTA...CCCCAACCTATCCGCCGCACCCTGATCTAGGTAATTTTGAAGCAAATCCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp ATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAAGTGGAAAACACAGTaGGTACTGATGATGACAGGT +
Preference number: 4 (lower is better)
Translates to: IQEPFMATLLGGDSFLEQKWKTQ*VLMMTG
Trigger: ACCTGTCATCATCAGTACTCACTGTGTTTTCCACTT...CTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp TCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGACTAGTTTGTACAGATaGAACAAAACCCGCCATGAG +
Preference number: 4 (lower is better)
Translates to: STNSGQGKCAYFIQEPFMTSLYR*NKTRHE
Trigger: CTCATGGCGGGTTTTGTTTCATCTGTACAAACTAGT...CATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CTGCAATTACTCAACTCTGCCAATGAAGTACAAAAACAGCCAAAAACAATAAGTTTCAGCCGGTGTGGCTaGGGCAGGGAGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: LQLLNSANEVQKQPKTISFSRCG*GRERSR
Trigger: ACGACTTCTCTCCCTGCCCCAGCCACACCGGCTGAA...ACTTATTGTTTTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGTAATTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp GGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTATCCATGGAGAATTATaGGACCAGAAGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GKCAYFIQEPFMATLLGGIHGEL*DQKMRW
Trigger: CCACCTCATCTTCTGGTCCCATAATTCTCCATGGAT...ACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACAAAGATACTTTCAAAGTGAGCTaGGACTTCTCAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QKESREPAVDPLKTRYKDTFKVS*DFSKGR
Trigger: CCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGT...ATCTTTGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAAATGCAAAACTTCTGTaGTCCGTTGCTACCGATGAG +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAENAKLL*SVATDE
Trigger: CTCATCGGTAGCAACGGACCACAGAAGTTTTGCATT...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
3UTR CAA 72 bp AAACCTTATTTACAAAAACAGTCAGAGGGCCGGATTTaGTCCACAGGCCATCATAGTGTGCCGACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: KPYLQKQSEGRI*STGHHSVPTSL
Trigger: CAAACTAGTCGGCACACTATGATGGCCTGTGGACAAAATCCGGCCCTCTGACTGTTTTTGTAAATAAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR GCA 90 bp CTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTTGAAAGTTCATCATTCACTGTaGCATTGGCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLYWEVILSWSRIHPLLKVHHSL*HWPSHC
Trigger: ACAGTGGCTTGGCCAATGGCACAGTGAATGATGAAC...TTTCAAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGCTTCAAGTTTATACATaGACAAAGTCTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVLQVYT*TKSEGV
Trigger: AACTCCCTCAGACTTTGTCCATGTATAAACTTGAAG...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGCAATTACTCAACTCTGCCAATGAAGTACAAAAACAGCCAAAAACAATAAGTGACCAGAAGATGAGGTaGGATGTGTGTGGCACACGC +
Preference number: 4 (lower is better)
Translates to: LQLLNSANEVQKQPKTISDQKMR*DVCGTR
Trigger: GCGTGTGCCACACACATCCCACCTCATCTTCTGGTC...ACTTATTGTTTTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGTAATTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACAAAGATACCTTTAAATCTAAATaGCTCTGTGCCGTGACATTC +
Preference number: 4 (lower is better)
Translates to: QKESREPAVDPLKTRYKDTFKSK*LCAVTF
Trigger: GAATGTCACGGCACAGAGTCATTTAGATTTAAAGGT...ATCTTTGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CCA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAATGTTCATGATCTGTTaGAAGGAATCTTCGAAAAGC +
Preference number: 4 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEMFMIC*KESSKS
Trigger: GCTTTTCGAAGATTCCTTCCAACAGATCATGAACAT...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CCA 90 bp CTGCAATTACTCAACTCTGCCAATGAAGTACAAAAACAGCCAAAAACAATAAGTTCCCAGATCAACAGTTaGCCCGTCCAGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: LQLLNSANEVQKQPKTISSQINS*PVQENC
Trigger: ACAATTTTCCTGGACGGGCCAACTGTTGATCTGGGA...ACTTATTGTTTTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGTAATTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp ACAGCCAAAAACAATAAGTCAACAAATATGTGTGGCTGTGTTCCAATAAAACCTCAACACTCTAAATCTTaGCCTCCCATGCGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TAKNNKSTNMCGCVPIKPQHSKS*PPMRLL
Trigger: CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTG...AGGTTTTATTGGAACACAGCCACACATATTTGTTGACTTATTGTTTTTGGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CTGCAATTACTCAACTCTGCCAATGAAGTACAAAAACAGCCAAAAACAATAAGTACACCACTTTCAAAGTaGGCTGAGACTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LQLLNSANEVQKQPKTISTPLSK*AETSQK
Trigger: CTTTTGAGAAGTCTCAGCTCACTTTGAAAGTGGTGT...ACTTATTGTTTTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGTAATTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR TCA 90 bp CTGCAATTACTCAACTCTGCCAATGAAGTACAAAAACAGCCAAAAACAATAAGTACTCAACTCTGCCAATaGAGTACAAAAACAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LQLLNSANEVQKQPKTISTQLCQ*STKTAK
Trigger: TTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGT...ACTTATTGTTTTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGTAATTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CCA 90 bp CTGCAATTACTCAACTCTGCCAATGAAGTACAAAAACAGCCAAAAACAATAAGTGTCAACAAATATGTGTaGCTGTGTTCCAATAAAACC +
Preference number: 4 (lower is better)
Translates to: LQLLNSANEVQKQPKTISVNKYV*LCSNKT
Trigger: GGTTTTATTGGAACACAGCCACACATATTTGTTGAC...ACTTATTGTTTTTGGCTGTTTTTGTACTTCATTGGCAGAGTTGAGTAATTGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS CCA 90 bp GGCAGCTCTCGCTGTTCCCATCCAGCAGGCAGAGCGTCGGGGGCCTaGGCAGCCGCTGGGAGCTGCTGTGTACCCGAAGTGCTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GSSRCSHPAGRASGA*AAAGSCCVPEVLGS
Trigger: GGAACCCAGCACTTCGGGTACACAGCAGCTCCCAGCGGCTGCCCAGGCCCCCGACGCTCTGCCTGCTGGATGGGAACAGCGAGAGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 90 bp GAGTCTGAGACCCACTGCTCAGGGGTGGCTCCCGGCCAGGCCGCGTaGCCGTTACCGCGCAGGACCACCAGATCAGCAGAGCCCACTTCG +
Preference number: 5 (lower is better)
Translates to: ESETHCSGVAPGQAA*PLPRRTTRSAEPTS
Trigger: CGAAGTGGGCTCTGCTGATCTGGTGGTCCTGCGCGGTAACGGCCACGCGGCCTGGCCGGGAGCCACCCCTGAGCAGTGGGTCTCAGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567303.1
CDS GCA 90 bp CCATTGGCCAAGCCACTGTGGCCTGAGTTCTTGACGGGCTGGCGGTaGCGGCTCCGAGCACCGGGGCTTTGCTCGCCGGTTGCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: PLAKPLWPEFLTGWR*RLRAPGLCSPVAGV
Trigger: AACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS-3UTR CAA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTTGCTGGCAAAGACCCTaGGCGCTCTCAGTCCCGAAC +
Preference number: 5 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGCWQRP*ALSVPN
Trigger: GTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCA...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS CCA 90 bp ACTGTGCCATTGGCCAAGCCACTGTGGCCTGAGTTCTTGACGGGCTaGCGGTGCCGGCTCCGAGCACCGGGGCTTTGCTCGCCGGTTGCT +
Preference number: 5 (lower is better)
Translates to: TVPLAKPLWPEFLTG*RCRLRAPGLCSPVA
Trigger: AGCAACCGGCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAATGGCACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 90 bp CTGTTCCCATCCAGCAGGCAGAGCGTCGGGGGCCTGGGCAGCCGCTaGGAGCTGCTGTGTACCCGAAGTGCTGGGTTCCTCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LFPSSRQSVGGLGSR*ELLCTRSAGFLSFS
Trigger: GCTGAAGGAGAGGAACCCAGCACTTCGGGTACACAGCAGCTCCCAGCGGCTGCCCAGGCCCCCGACGCTCTGCCTGCTGGATGGGAACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS-3UTR CAA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTGGGAGAGAAGTCGTGTaGGGATTCGGGGTCACACTC +
Preference number: 5 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGGREVV*GFGVTL
Trigger: GAGTGTGACCCCGAATCCCAACACGACTTCTCTCCC...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCCATCCAGGAAGGCTTaGGTCTGCTCTTCCACGCCT +
Preference number: 5 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGPSRKA*VCSSTP
Trigger: AGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAAACCTCACCAGCAGCTaGCACCCTGACCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRNLTSS*HPDPPW
Trigger: CCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGTT...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS GCA 90 bp GAGTTCTTGACGGGCTGGCGGTGCCGGCTCCGAGCACCGGGGCTTTaGTCGCCGGTTGCTGGGGTTGTTCTGGCTGAAGCACCCGAATGT +
Preference number: 5 (lower is better)
Translates to: EFLTGWRCRLRAPGL*SPVAGVVLAEAPEC
Trigger: ACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS-3UTR CAA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCGGATCCTCTTCTCGTaGTCCATCTCCTTCACCACC +
Preference number: 5 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGRILFS*SISFTT
Trigger: GGTGGTGAAGGAGATGGACAACGAGAAGAGGATCCG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS TCA 90 bp CATCATTCACTGTGCCATTGGCCAAGCCACTGTGGCCTGAGTTCTTaGCGGGCTGGCGGTGCCGGCTCCGAGCACCGGGGCTTTGCTCGC +
Preference number: 5 (lower is better)
Translates to: HHSLCHWPSHCGLSS*RAGGAGSEHRGFAR
Trigger: GCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAATGGCACAGTGAATGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS-3UTR CAA 90 bp CAGGCTGTGCCGCCGGGTCAGGCCTGCCTGAGCTCACGGAACCGCCAGGTGGGTCTGGTAGAGGAATCTTaGGCTGAAGTGCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: QAVPPGQACLSSRNRQVGLVEES*AEVLHG
Trigger: GCCATGCAGCACTTCAGCCAAAGATTCCTCTACCAG...ACCCACCTGGCGGTTCCGTGAGCTCAGGCAGGCCTGACCCGGCGGCACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS TCA 90 bp TGTGGGTTCATCATTCACTGTGCCATTGGCCAAGCCACTGTGGCCTaGGTTCTTGACGGGCTGGCGGTGCCGGCTCCGAGCACCGGGGCT +
Preference number: 5 (lower is better)
Translates to: CGFIIHCAIGQATVA*VLDGLAVPAPSTGA
Trigger: AGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAATGGCACAGTGAATGATGAACCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 90 bp GGCTCCGAGCACCGGGGCTTTGCTCGCCGGTTGCTGGGGTTGTTCTaGCTGAAGCACCCGAATGTCTGTGCGTCCGGGATCTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: GSEHRGFARRLLGLF*LKHPNVCASGIFHQ
Trigger: TTGGTGGAAGATCCCGGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
CDS-3UTR CAA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAAAGACGTTGGAGAGGTaGACAGATGCGGTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRKTLER*TDAVPS
Trigger: GCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTT...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CAA 90 bp AAACAGGGCACACGGGCTCTCCTAAGAGTCCCTACTTCCGACAGCCTTTCCCTCCCGAGCACCGGGGCTTaGCTCGCCGGTTGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: KQGTRALLRVPTSDSLSLPSTGA*LAGCWG
Trigger: ACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGG...GAGGGAAAGGCTGTCGGAAGTAGGGACTCTTAGGAGAGCCCGTGTGCCCTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCTGTGGCCTGAGTTCTaGACGGGCTGGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPALWPEF*TGWRCR
Trigger: CCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAG...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS TCA 90 bp CCGAGCACCGGGGCTTTGCTCGCCGGTTGCTGGGGTTGTTCTGGCTaGAGCACCCGAATGTCTGTGCGTCCGGGATCTTCCACCAAAGCA +
Preference number: 5 (lower is better)
Translates to: PSTGALLAGCWGCSG*STRMSVRPGSSTKA
Trigger: TGCTTTGGTGGAAGATCCCGGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
CDS TCA 90 bp GCCCAGTGCCTCCGCTCAGCTCCGGCTCAAGGCGGCCAAGGCGACTaGAATCACCACCACCTCCAACTTTCTCCAAGAACCACACGCAGG +
Preference number: 5 (lower is better)
Translates to: AQCLRSAPAQGGQGD*NHHHLQLSPRTTRR
Trigger: CCTGCGTGTGGTTCTTGGAGAAAGTTGGAGGTGGTGGTGATTTCAGTCGCCTTGGCCGCCTTGAGCCGGAGCTGAGCGGAGGCACTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS TCA 90 bp CCCACTAGATCTCCACGCCACCCCTGGAGCGGAGCCCCCGGCGCCTaGGACTCACATGATGTACTCTTCCTTGTTCTCCTCTGTGACCCG +
Preference number: 5 (lower is better)
Translates to: PTRSPRHPWSGAPGA*DSHDVLFLVLLCDP
Trigger: CGGGTCACAGAGGAGAACAAGGAAGAGTACATCATGTGAGTCTCAGGCGCCGGGGGCTCCGCTCCAGGGGTGGCGTGGAGATCTAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS GCA 90 bp CTTCTCAAAAGGCAGGGCCACTCCTGCCCGGCTAGAGCTGGCAGATaGCATATCATCACCGTGAAGCTGCCGTGGCCACAGAAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LLKRQGHSCPARAGR*HIITVKLPWPQKRR
Trigger: GCGCCGCTTCTGTGGCCACGGCAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCCTTTTGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359154.7
ENST00000568845.5
ENST00000569658.1
CDS GCA 90 bp TCCAGCGGGGCCACCTCGTTGAAGCCATCCAGGAAGGCTTTGGTCTaGTCTTCCACGCCTCGGGTGAAACGCCAGTCAGTCAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SSGATSLKPSRKALV*SSTPRVKRQSVSSL
Trigger: CAGGCTGCTGACTGACTGGCGTTTCACCCGAGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567303.1
CDS CCA 90 bp GCTGCTGTGTACCCGAAGTGCTGGGTTCCTCTCCTTCAGCCGGTGTaGCTGGGGCAGGGAGAGAAGTCGTGTTGGGATTCGGGGTCACAC +
Preference number: 5 (lower is better)
Translates to: AAVYPKCWVPLLQPV*LGQGEKSCWDSGSH
Trigger: GTGTGACCCCGAATCCCAACACGACTTCTCTCCCTGCCCCAGCCACACCGGCTGAAGGAGAGGAACCCAGCACTTCGGGTACACAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 90 bp CTGGAAAGTCTGCAGTGTGGGTTTAACAGGCCACGCGATAGGAGATaGGGTGCTGGGAGGAGGGCGTCGGCCTGCCACTGGTTTCGGGCA +
Preference number: 5 (lower is better)
Translates to: LESLQCGFNRPRDRR*GAGRRASACHWFRA
Trigger: TGCCCGAAACCAGTGGCAGGCCGACGCCCTCCTCCCAGCACCCCATCTCCTATCGCGTGGCCTGTTAAACCCACACTGCAGACTTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS-3UTR CAA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGCCGAGCACCGGGGCTTaGCTCGCCGGTTGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGPSTGA*LAGCWG
Trigger: ACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGG...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGGACAGGGGAGAGTTTaGCAGAGAGGGTCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEGQGRV*QRGSAL
Trigger: GAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTCC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAATGCTGGCAAAGACCCTaGGCGCTCTCAGTCCCGAAC +
Preference number: 5 (lower is better)
Translates to: PELTEPPGGFLRGVAVWECWQRP*ALSVPN
Trigger: GTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGCA...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAGTCTCCTCGCCGAACTAGTCCAGGAGGTCTCCGGCCTCTGCGGCTGTTTGGGAAACTCTaGGACCCAAAGGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PSGQSPRRTSPGGLRPLRLFGKL*DPKVWV
Trigger: GACCCAGACCTTTGGGTCCAAGAGTTTCCCAAACAG...CCGCAGAGGCCGGAGACCTCCTGGACTAGTTCGGCGAGGAGACTGGCCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS GCA 90 bp TCCAGCGGGGCCACCTCGTTGAAGCCATCCAGGAAGGCTTTGGTCTaGTCTTCCACGCCTCGGGTGAAACGCCAGTCAGTCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: SSGATSLKPSRKALV*SSTPRVKRQSVSSM
Trigger: CATGCTGCTGACTGACTGGCGTTTCACCCGAGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000568684.1
ENST00000569297.5
CDS-3UTR CAA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTGGCTTTGCTCGCCGGTaGCTGGGGTTGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPAGFARR*LGLFWL
Trigger: CAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCC...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAACAGGCAGAACCTCCTTaGCTGGCAAAGACCCTTGGC +
Preference number: 5 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEQAEPP*LAKTLG
Trigger: GCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTG...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CGCAGGCTGCACCTCCCGGGCCGGGGGAAGGTCGAGAATCTGGGAGCATGGAGAGGGATTTCTTCTCTATaGAAGGCGGCAAGGCTAGGA +
Preference number: 5 (lower is better)
Translates to: RRLHLPGRGKVENLGAWRGISSL*KAARLG
Trigger: TCCTAGCCTTGCCGCCTTCAATAGAGAAGAAATCCC...TCTCCATGCTCCCAGATTCTCGACCTTCCCCCGGCCCGGGAGGTGCAGCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS TCA 90 bp AGCCCACTTCGCACACCCAGACCCAGCCTGCTGGAGGACCTAGAGTaGGGCCCTGAAAACCTCACAGTGACCTGCAGACACCGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SPLRTPRPSLLEDLE*GPENLTVTCRHRSL
Trigger: AAGACTCCGGTGTCTGCAGGTCACTGTGAGGTTTTCAGGGCCTCACTCTAGGTCCTCCAGCAGGCTGGGTCTGGGTGTGCGAAGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567303.1
CDS GCA 90 bp GGCAGGGAGAGAAGTCGTGTTGGGATTCGGGGTCACACTCAAGGGTaGAGCAGGTGGGGACGTCACACCAACAACGGAAGGTTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: GRERSRVGIRGHTQG*SRWGRHTNNGRFFG
Trigger: CCCGAAGAACCTTCCGTTGTTGGTGTGACGTCCCCACCTGCTGCACCCTTGAGTGTGACCCCGAATCCCAACACGACTTCTCTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 90 bp CCGAATGTCTGTGCGTCCGGGATCTTCCACCAAAGCAGTTTGTGCTaGGGGGCTGGTGCCGGTTCTCTGGAGCTACTGCTGTTCCACTGG +
Preference number: 5 (lower is better)
Translates to: PNVCASGIFHQSSLC*GAGAGSLELLLFHW
Trigger: CCAGTGGAACAGCAGTAGCTCCAGAGAACCGGCACCAGCCCCCCAGCACAAACTGCTTTGGTGGAAGATCCCGGACGCACAGACATTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS-3UTR CAA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGTTCCCAGATCAACAGTaGGCCCGTCCAGGAAAATTG +
Preference number: 5 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQFPDQQ*ARPGKL
Trigger: CAATTTTCCTGGACGGGCCAACTGTTGATCTGGGAA...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp TGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCCTGTGGCCTGAGTTCTaGACGGGCTGGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: WITWRHSHEALPNKKHSALWPEF*TGWRCR
Trigger: CCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAG...GGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCCCATCCAGGAAGGCTTaGGTCTGCTCTTCCACGCCT +
Preference number: 5 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGPSRKA*VCSSTP
Trigger: AGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGG...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAGCGGGGCCACCTCGTaGAAGCCATCCAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTSGATS*KPSRKA
Trigger: AGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGCT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GCTGGCAAAGACCCTTGGCGCTCTCAGTCCCGAACAGCCACCCCCAGTGGCCAGGGCAGCCAGGTTTCCTaGCCAACTTTGTCAATGCAA +
Preference number: 5 (lower is better)
Translates to: AGKDPWRSQSRTATPSGQGSQVS*PTLSMQ
Trigger: TTGCATTGACAAAGTTGGCAAGGAAACCTGGCTGCC...CTGGCCACTGGGGGTGGCTGTTCGGGACTGAGAGCGCCAAGGGTCTTTGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGGGAGTTTGCTGTTTTaGTCCCGTGGATACCCAGGC +
Preference number: 5 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEGSLLF*SRGYPG
Trigger: GCCTGGGTATCCACGGGACAAAAACAGCAAACTCCC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCGCATGGAGACTGTGCTaGGAAGGCACCCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCAWRLC*EGTRDQ
Trigger: CTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGC...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS TCA 90 bp GCCACTCCTGCCCGGCTAGAGCTGGCAGATGCCATATCATCACCGTaGAGCTGGTGGAAGAGAAGTCCCCTGACTCCAGCCCTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: ATPARLELADAISSP*SWWKRSPLTPALFS
Trigger: GCTAAAGAGGGCTGGAGTCAGGGGACTTCTCTTCCACCAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 90 bp CCCACCAGCAGCCACCATCAAGGCAAATGCAAATGGCATCCACAGTaGCCGATGGGCCACAGGTGGGGGCCCATCTTTCTCTGCAACCCA +
Preference number: 5 (lower is better)
Translates to: PTSSHHQGKCKWHPQ*PMGHRWGPIFLCNP
Trigger: TGGGTTGCAGAGAAAGATGGGCCCCCACCTGTGGCCCATCGGTCACTGTGGATGCCATTTGCATTTGCCTTGATGGTGGCTGCTGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS CCA 90 bp TTCTCCTCTGTGACCCGGATGCTCTCGCCGCCCTCCTTCAGCTCGTaGGTCGTCACCTTGCCCAGTATCTCCATGTCCTGGATGAAGTAC +
Preference number: 5 (lower is better)
Translates to: FSSVTRMLSPPSFSS*VVTLPSISMSWMKY
Trigger: GTACTTCATCCAGGACATGGAGATACTGGGCAAGGTGACGACCCACGAGCTGAAGGAGGGCGGCGAGAGCATCCGGGTCACAGAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567161.1
ENST00000568684.1
ENST00000569297.5
CDS CCA 90 bp CCACGCTGCAGGCTTGAAGTCTCCCACATGGCGAAAAAGCACAGCTaGGAGTCGGTAACTAAGGACCTCGGCTTTGGTTCCCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PRCRLEVSHMAKKHS*ESVTKDLGFGSPSS
Trigger: CGAGCTGGGGGAACCAAAGCCGAGGTCCTTAGTTACCGACTCCCAGCTGTGCTTTTTCGCCATGTGGGAGACTTCAAGCCTGCAGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS-3UTR CAA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTAGCACCAGGGGAACCTaGCTTCGTCCCCGACTCAAA +
Preference number: 5 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPASTRGT*LRPRLK
Trigger: TTTGAGTCGGGGACGAAGCAAGGTTCCCCTGGTGCT...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp AGGCAACTAGGGGGCTTTATTCCAGACTGCCATCCGCGGGTCGGGGGAACTGCAGGGAGTTTGCTGTTTTaGTCCCGTGGATACCCAGGC +
Preference number: 5 (lower is better)
Translates to: RQLGGFIPDCHPRVGGTAGSLLF*SRGYPG
Trigger: GCCTGGGTATCCACGGGACAAAAACAGCAAACTCCC...TGCAGTTCCCCCGACCCGCGGATGGCAGTCTGGAATAAAGCCCCCTAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGCATGGAGACTGTGCTaGGAAGGCACCCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGAWRLC*EGTRDQ
Trigger: CTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GCTCTCGGGACCAGGAGACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGTGCGGCGGATAGGTaGGGGGTTACAGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: ALGTRRHMWKELSVPGRQGAADR*GVTDRE
Trigger: CTCCCGATCTGTAACCCCCAACCTATCCGCCGCACC...CTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTCTCCTGGTCCCGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 90 bp GCCACTCCTGCCCGGCTAGAGCTGGCAGATGCCATATCATCACCGTaGAGCTGTAATCCCAGGTATCCGGAGGCTGAGGCAGAAGAATCG +
Preference number: 5 (lower is better)
Translates to: ATPARLELADAISSP*SCNPRYPEAEAEES
Trigger: CGATTCTTCTGCCTCAGCCTCCGGATACCTGGGATTACAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561780.5
ENST00000563659.5
ENST00000569620.5
CDS TCA 90 bp GAGACAATGGTGGCCTGGACTAGGCTGGGACCTTTCAAAGTGAGCTaGGACTTCTCAAAAGGCAGGGCCACTCCTGCCCGGCTAGAGCTG +
Preference number: 5 (lower is better)
Translates to: ETMVAWTRLGPFKVS*DFSKGRATPARLEL
Trigger: CAGCTCTAGCCGGGCAGGAGTGGCCCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGGTCCCAGCCTAGTCCAGGCCACCATTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568845.5
CDS GCA 90 bp CTTCTCAAAAGGCAGGGCCACTCCTGCCCGGCTAGAGCTGGCAGATaGCATATCATCACCGTGAAGCTGGTGGAAGAGAAGTCCCCTGAC +
Preference number: 5 (lower is better)
Translates to: LLKRQGHSCPARAGR*HIITVKLVEEKSPD
Trigger: GTCAGGGGACTTCTCTTCCACCAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCCTTTTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS CCA 90 bp AGAAGTCGTGTTGGGATTCGGGGTCACACTCAAGGGTGCAGCAGGTaGGGACGTCACACCAACAACGGAAGGTTCTTCGGGATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: RSRVGIRGHTQGCSR*GRHTNNGRFFGISG
Trigger: GCCACTGATCCCGAAGAACCTTCCGTTGTTGGTGTGACGTCCCCACCTGCTGCACCCTTGAGTGTGACCCCGAATCCCAACACGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 90 bp AGGTGGTGGTCTTGGTATTGTGGTCAACATAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCCATCCAGCAGGCAGAGCGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: RWWSWYCGQHNRHVR*AALAVPIQQAERRG
Trigger: CCCCCGACGCTCTGCCTGCTGGATGGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATTATGTTGACCACAATACCAAGACCACCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS-3UTR CAA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGGCTTTGCTCGCCGGTaGCTGGGGTTGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GAASMVTCHREVQQMTERGFARR*LGLFWL
Trigger: CAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp GTGACCCGGAATAAACGTCACTGTGCTATGCTACCTCCGCAGAAAGGGACCGTTGGCTTTGCTCGCCGGTaGCTGGGGTTGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VTRNKRHCAMLPPQKGTVGFARR*LGLFWL
Trigger: CAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCC...AACGGTCCCTTTCTGCGGAGGTAGCATAGCACAGTGACGTTTATTCCGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGCCGAGCACCGGGGCTTaGCTCGCCGGTTGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVPSTGA*LAGCWG
Trigger: ACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGG...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAGCACCAGGGGAACCTaGCTTCGTCCCCGACTCAAA +
Preference number: 5 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTSTRGT*LRPRLK
Trigger: TTTGAGTCGGGGACGAAGCAAGGTTCCCCTGGTGCT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGATGATGTACTCTTCCTaGTTCTCCTCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGMMYSS*FSSVTR
Trigger: CCGGGTCACAGAGGAGAACAAGGAAGAGTACATCAT...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAGCGGGGCCACCTCGTaGAAGCCATCCAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSGATS*KPSRKA
Trigger: AGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGCT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACACAGGCAGAACCTCCTTaGCTGGCAAAGACCCTTGGC +
Preference number: 5 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTQAEPP*LAKTLG
Trigger: GCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTG...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGCTCATTCTGCCAGGCTaGGGGACGAGGTCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: GAASMVTCHREVQQMTERLILPG*GTRSLP
Trigger: TGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGAG...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAACCTCACCAGCAGCTaGCACCCTGACCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTNLTSS*HPDPPW
Trigger: CCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGTT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS TCA 90 bp CCTGGGGGAGAGAGTGAGACTCCATCTGGTGGAAGAGAAGTCCCCTaGCTCCAGCCCTCTTTAGCCTTTCTGTTTCATCTGCCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PGGESETPSGGREVP*LQPSLAFLFHLPWP
Trigger: TGGCCACGGCAGATGAAACAGAAAGGCTAAAGAGGGCTGGAGTCAGGGGACTTCTCTTCCACCAGATGGAGTCTCACTCTCTCCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561780.5
ENST00000569620.5
CDS CCA 90 bp GTGTCAGTTCCAGAGTCTCAGGTCTTCTCAGTTGATGACCTACCCTaGAGGAAGGGGCCGCTCCCAGGTGGTGGTCTTGGTATTGTGGTC +
Preference number: 5 (lower is better)
Translates to: VSVPESQVFSVDDLP*RKGPLPGGGLGIVV
Trigger: GACCACAATACCAAGACCACCACCTGGGAGCGGCCCCTTCCTCCAGGGTAGGTCATCAACTGAGAAGACCTGAGACTCTGGAACTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp CCTGAGCTCACGGAACCGCCAGGTGGGTTCCTGAGAGGCGTGGCTGTTTGGGAAGGAGTTAATTCGAGGTaGACGATTATGCACCTTGGG +
Preference number: 5 (lower is better)
Translates to: PELTEPPGGFLRGVAVWEGVNSR*TIMHLG
Trigger: CCCAAGGTGCATAATCGTCAACCTCGAATTAACTCC...TTCCCAAACAGCCACGCCTCTCAGGAACCCACCTGGCGGTTCCGTGAGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CAA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGCCCGTCCAGGAAAATaGTCAGCTCTCCGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGARPGK*SALRLR
Trigger: TCTCAGGCGGAGAGCTGACAATTTTCCTGGACGGGC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACTGTGGCCTGAGTTCTaGACGGGCTGGCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYALWPEF*TGWRCR
Trigger: CCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCTGGTAGAGGAATCTTaGGCTGAAGTGCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPALVEES*AEVLHG
Trigger: GCCATGCAGCACTTCAGCCAAAGATTCCTCTACCAG...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTTCGTGGGTCGTCACCTaGCCCAGTATCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPSWVVT*PSISMS
Trigger: GGACATGGAGATACTGGGCAAGGTGACGACCCACGA...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCCATCCAGGAAGGCTTaGGTCTGCTCTTCCACGCCT +
Preference number: 5 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPPSRKA*VCSSTP
Trigger: AGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAGCGGGGCCACCTCGTaGAAGCCATCCAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHSGATS*KPSRKA
Trigger: AGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGCT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCCGGATCCTCTTCTCGTaGTCCATCTCCTTCACCACC +
Preference number: 5 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCRILFS*SISFTT
Trigger: GGTGGTGAAGGAGATGGACAACGAGAAGAGGATCCG...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GGGACTGCCTGGGGGACCCTATCTAGCAAAGGGATTTCTTCTCTATTGAAGGCGGGACAGGGGAGAGTTTaGCAGAGAGGGTCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GTAWGTLSSKGISSLLKAGQGRV*QRGSAL
Trigger: GAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTCC...CGCCTTCAATAGAGAAGAAATCCCTTTGCTAGATAGGGTCCCCCAGGCAGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAGAGAGGCGTGGCTGTTaGGGAAACTCTTGGACCCAA +
Preference number: 5 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTERRGC*GNSWTQ
Trigger: TTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTC...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS TCA 90 bp CAGATCAACAGTTGGCCCGTCCAGGAAAATTGTCAGCTCTCCGCCTaGGACAACGCTGCCTTTGTTCTCCGTCTGCAGGTTCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: QINSWPVQENCQLSA*DNAAFVLRLQVQGQ
Trigger: CTGACCCTGAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACAATTTTCCTGGACGGGCCAACTGTTGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS GCA 90 bp TTGGCCCGTCCAGGAAAATTGTCAGCTCTCCGCCTGAGACAACGCTaGCTTTGTTCTCCGTCTGCAGGTTCAGGGTCAGCTGCATGTTCT +
Preference number: 5 (lower is better)
Translates to: LARPGKLSALRLRQR*LCSPSAGSGSAACS
Trigger: AGAACATGCAGCTGACCCTGAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACAATTTTCCTGGACGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS-3UTR CAA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTGAGACAACGCTGCCTTaGTTCTCCGTCTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPETTLP*FSVCRF
Trigger: GAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTC...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp CTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCTTTAGGGGAGACAACGCTGCCTTaGTTCTCCGTCTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LGGILTKPCRIRSTLPLGETTLP*FSVCRF
Trigger: GAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTC...CCCTAAAGGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAAGCACCAGGGGAACCTaGCTTCGTCCCCGACTCAAA +
Preference number: 5 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTSTRGT*LRPRLK
Trigger: TTTGAGTCGGGGACGAAGCAAGGTTCCCCTGGTGCT...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGGTGAGGTGGTCCGGGTaGATGGAGGAGGCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVVRWSG*MEEAGL
Trigger: CAACCCCGCCTCCTCCATCAACCCGGACCACCTCAC...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp TTCTGCCAGCAGCGAGATGACAGTGTGGTCCCACACAGGGCCACATCCACGGGGTCCAGGTTGTTCTCTTaGATCCAGACAATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: FCQQRDDSVVPHRATSTGSRLFS*IQTMEL
Trigger: CAACTCCATTGTCTGGATCAAAGAGAACAACCTGGA...CCCCGTGGATGTGGCCCTGTGTGGGACCACACTGTCATCTCGCTGCTGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTCCTGGACAGAAAGTGACAAACTTCTGTGGTCCGTaGCTACCGATGAGTTCGGCA +
Preference number: 5 (lower is better)
Translates to: VPQGLRTPGVPAPGQKVTNFCGP*LPMSSA
Trigger: TGCCGAACTCATCGGTAGCAACGGACCACAGAAGTT...TGTCACTTTCTGTCCAGGAGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACAGGCAGAACCTCCTTaGCTGGCAAAGACCCTTGGC +
Preference number: 5 (lower is better)
Translates to: LKGTEEAALWQAKPLKSAQAEPP*LAKTLG
Trigger: GCCAAGGGTCTTTGCCAGCAAAGGAGGTTCTGCCTG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCGCATGTTCTCCACCTTaGGGTTTTCAAGCTCTCCTA +
Preference number: 5 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGACSPP*GFQALL
Trigger: TAGGAGAGCTTGAAAACCCAAAGGTGGAGAACATGC...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356003.6
CDS-3UTR CAA 90 bp AGGTGGGATGTGTGTGGCACACGCCTGACAGCTGAACCAAACAGGGCACACGGGGGAGGTGATTCTTTCTaGGAGCAGAATACATCCCCT +
Preference number: 5 (lower is better)
Translates to: RWDVCGTRLTAEPNRAHGGGDSF*EQNTSP
Trigger: AGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCC...CCCGTGTGCCCTGTTTGGTTCAGCTGTCAGGCGTGTGCCACACACATCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS GCA 90 bp CACTTTCAAAGTGAGCTGAGACTTCTCAAAAGGCAGGGCCACTCCTaGCCGGCTAGAGCTGGCAGATGCCATATCATCACCGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HFQSELRLLKRQGHS*PARAGRCHIITVKL
Trigger: CAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359154.7
ENST00000561780.5
ENST00000563659.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS GCA 90 bp ATTGTCAGCTCTCCGCCTGAGACAACGCTGCCTTTGTTCTCCGTCTaGAGGTTCAGGGTCAGCTGCATGTTCTCCATTTTGCCCCCATTG +
Preference number: 5 (lower is better)
Translates to: IVSSPPETTLPLFSV*RFRVSCMFSILPPL
Trigger: CAATGGGGGCAAAATGGAGAACATGCAGCTGACCCTGAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359154.7
ENST00000544162.5
ENST00000567986.5
ENST00000569174.5
CDS GCA 90 bp AATATCCAGCAGACACAGTCACCAAGACTCACGCCCTGGAAAGTCTaGAGTGTGGGTTTAACAGGCCACGCGATAGGAGATGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: NIQQTQSPRLTPWKV*SVGLTGHAIGDGVL
Trigger: CAGCACCCCATCTCCTATCGCGTGGCCTGTTAAACCCACACTGCAGACTTTCCAGGGCGTGAGTCTTGGTGACTGTGTCTGCTGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS GCA 90 bp TCGCCGGTTGCTGGGGTTGTTCTGGCTGAAGCACCCGAATGTCTGTaGGTCCTGGGGGTTCAAAGTAGAAAGCAGACAGACATAAGTCAC +
Preference number: 5 (lower is better)
Translates to: SPVAGVVLAEAPECL*VLGVQSRKQTDISH
Trigger: GTGACTTATGTCTGTCTGCTTTCTACTTTGAACCCCCAGGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570104.1
CDS GCA 90 bp ACCTTTCAAAGTGAGCTGAGACTTCTCAAAAGGCAGGGCCACTCCTaGCCGGCTAGAGCTGGCAGATGCCATATCATCACCGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TFQSELRLLKRQGHS*PARAGRCHIITVKL
Trigger: CAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568845.5
CDS-3UTR CAA 90 bp CTCTCTCATCCTTTGGTTTTGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCCGCTTCCCAGTCTTCTaGGTCTCACTGGGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: LSHPLVLDNLAAFSRSPARFPVF*VSLGSP
Trigger: TGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGCG...GGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp CTCTCTCATCCTTTGGTTTTGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCGCCCGTCCAGGAAAATaGTCAGCTCTCCGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: LSHPLVLDNLAAFSRSPAARPGK*SALRLR
Trigger: TCTCAGGCGGAGAGCTGACAATTTTCCTGGACGGGC...GGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp TATGAAGATTCCAGTTACGGCAGAGTCCCCGTGTTGGAGGCTGGCGGGAACTGCTTCCCAGATCAACAGTaGGCCCGTCCAGGAAAATTG +
Preference number: 5 (lower is better)
Translates to: YEDSSYGRVPVLEAGGNCFPDQQ*ARPGKL
Trigger: CAATTTTCCTGGACGGGCCAACTGTTGATCTGGGAA...GCAGTTCCCGCCAGCCTCCAACACGGGGACTCTGCCGTAACTGGAATCTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGTGAGGTGGTCCGGGTaGATGGAGGAGGCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNVRWSG*MEEAGL
Trigger: CAACCCCGCCTCCTCCATCAACCCGGACCACCTCAC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GAGGGTCAGCCCTCTGGAACTTTGCAAAGGTGGGGCCAAAGGCAACTAGGGGGCTCCAGGTTGTTCTCTTaGATCCAGACAATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: EGQPSGTLQRWGQRQLGGSRLFS*IQTMEL
Trigger: CAACTCCATTGTCTGGATCAAAGAGAACAACCTGGA...GCCCCCTAGTTGCCTTTGGCCCCACCTTTGCAAAGTTCCAGAGGGCTGACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CTGAAAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACGGATCCTCTTCTCGTaGTCCATCTCCTTCACCACC +
Preference number: 5 (lower is better)
Translates to: LKGTEEAALWQAKPLKSARILFS*SISFTT
Trigger: GGTGGTGAAGGAGATGGACAACGAGAAGAGGATCCG...TGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGAACTTCTGTGGTCCGTaGCTACCGATGAGTTCGGCA +
Preference number: 5 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGNFCGP*LPMSSA
Trigger: TGCCGAACTCATCGGTAGCAACGGACCACAGAAGTT...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACAGAGAGGCGTGGCTGTTaGGGAAACTCTTGGACCCAA +
Preference number: 5 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTERRGC*GNSWTQ
Trigger: TTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTC...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCACTCATTCTGCCAGGCTaGGGGACGAGGTCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYALILPG*GTRSLP
Trigger: TGGCAGGGACCTCGTCCCCAAGCCTGGCAGAATGAG...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGCATGGAGACTGTGCTaGGAAGGCACCCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAAWRLC*EGTRDQ
Trigger: CTGGTCCCGGGTGCCTTCCAAGCACAGTCTCCATGC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CTATGCAGAATGAACACTTTCCGCTGGCGGGCTGCACTCCATTCTGAACAGGGGGACTGGCTTCCACATTaGAGCGCTTTGCAGGGAATG +
Preference number: 5 (lower is better)
Translates to: LCRMNTFRWRAALHSEQGDWLPH*SALQGM
Trigger: CATTCCCTGCAAAGCGCTCAAATGTGGAAGCCAGTC...CCCCTGTTCAGAATGGAGTGCAGCCCGCCAGCGGAAAGTGTTCATTCTGCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS GCA 90 bp ATTGTCAGCTCTCCGCCTGAGACAACGCTGCCTTTGTTCTCCGTCTaGAGGTTCAGGGTCAGCTGCATGTTCTCCACCTTTGGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: IVSSPPETTLPLFSV*RFRVSCMFSTFGFS
Trigger: TGAAAACCCAAAGGTGGAGAACATGCAGCTGACCCTGAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000563618.5
CDS CCA 90 bp CTAAGGCCCAATATCCAGCAGACACAGTCACCAAGACTCACGCCCTaGAAAGTCTGCAGTGTGGGTTTAACAGGCCACGCGATAGGAGAT +
Preference number: 5 (lower is better)
Translates to: LRPNIQQTQSPRLTP*KVCSVGLTGHAIGD
Trigger: ATCTCCTATCGCGTGGCCTGTTAAACCCACACTGCAGACTTTCCAGGGCGTGAGTCTTGGTGACTGTGTCTGCTGGATATTGGGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS-3UTR CAA 90 bp TTGGACCCAAAGGTCTGGGTCCCTCAAGGTCTCAGAACACCTGGGGTGCCAGCTTGCATGTTCTCCATTTaGCCCCCATTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LDPKVWVPQGLRTPGVPACMFSI*PPLFFK
Trigger: CTTGAAGAACAATGGGGGCAAAATGGAGAACATGCA...AGCTGGCACCCCAGGTGTTCTGAGACCTTGAGGGACCCAGACCTTTGGGTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGAGACAACGCTGCCTTaGTTCTCCGTCTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHETTLP*FSVCRF
Trigger: GAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGTGAGGTGGTCCGGGTaGATGGAGGAGGCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEVRWSG*MEEAGL
Trigger: CAACCCCGCCTCCTCCATCAACCCGGACCACCTCAC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGGAAGATCCAGACGGTaGAAGCAGGTGTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHGRSRR*KQVWLL
Trigger: CAGAAGCCACACCTGCTTCAACCGTCTGGATCTTCC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGGGAGTTTGCTGTTTTaGTCCCGTGGATACCCAGGC +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHGSLLF*SRGYPG
Trigger: GCCTGGGTATCCACGGGACAAAAACAGCAAACTCCC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACAACCTCACCAGCAGCTaGCACCCTGACCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNNLTSS*HPDPPW
Trigger: CCAGGGTGGGTCAGGGTGCAAGCTGCTGGTGAGGTT...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp TGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCCTCAGGTCTTCTCAGTaGATGACCTACCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: WITWRHSHEALPNKKHSALRSSQ*MTYPGG
Trigger: TCCTCCAGGGTAGGTCATCAACTGAGAAGACCTGAG...GGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp TGTTCTCCAGTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCTATGCACCTTGGGCTTaGCGGACACCACTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CSPVTRYPRRSLGNQLWIYAPWA*RTPLSK
Trigger: CTTTGAAAGTGGTGTCCGCAAAGCCCAAGGTGCATA...GATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTACTGGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CAA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGCGCTTCCCAGTCTTCTaGGTCTCACTGGGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVRFPVF*VSLGSP
Trigger: TGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGCG...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CAA 90 bp TACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACACGCTTCCCAGTCTTCTaGGTCTCACTGGGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: YPRRSLGNQLWILLKQDTRFPVF*VSLGSP
Trigger: TGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGCG...TGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CAA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGCCCGTCCAGGAAAATaGTCAGCTCTCCGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAARPGK*SALRLR
Trigger: TCTCAGGCGGAGAGCTGACAATTTTCCTGGACGGGC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCATCGTGGGTCGTCACCTaGCCCAGTATCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYASWVVT*PSISMS
Trigger: GGACATGGAGATACTGGGCAAGGTGACGACCCACGA...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACAACTTCTGTGGTCCGTaGCTACCGATGAGTTCGGCA +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHNFCGP*LPMSSA
Trigger: TGCCGAACTCATCGGTAGCAACGGACCACAGAAGTT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGGGCAGCCAGGTTTCCTaGCCAACTTTGTCAATGCAA +
Preference number: 5 (lower is better)
Translates to: GAASMVTCHREVQQMTERGSQVS*PTLSMQ
Trigger: TTGCATTGACAAAGTTGGCAAGGAAACCTGGCTGCC...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCGGAAGATCCAGACGGTaGAAGCAGGTGTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GLSAGFHVLCADKASHLCGRSRR*KQVWLL
Trigger: CAGAAGCCACACCTGCTTCAACCGTCTGGATCTTCC...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GGCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCCCACATTTGAGCGCTTaGCAGGGAATGCAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: GLSAGFHVLCADKASHLCPHLSA*QGMQWD
Trigger: GTCCCACTGCATTCCCTGCAAAGCGCTCAAATGTGG...GCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS-3UTR CAA 90 bp CTACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCCGTTTCAAGAAGCCATaGGGTGACTCATGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LPPQKGTVSRSHWVTHGVRFKKP*GDSWCQ
Trigger: CTGACACCATGAGTCACCCAATGGCTTCTTGAAACG...GACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp GGGTACGGCGGAATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGAGAATACATCCCCTTTaGAAAGCTCTCGGGACCAGG +
Preference number: 5 (lower is better)
Translates to: GYGGMHQHSKSWPPMRLLRIHPL*KALGTR
Trigger: CCTGGTCCCGAGAGCTTTCAAAAGGGGATGTATTCT...CAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCATTCCGCCGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 90 bp CCTGGGGGAGAGAGTGAGACTCCATCTGGTGGAAGAGAAGTCCCCTaGCTCCAGCCCTCTTTAGCCTTTCTGTTTCATCAGTCAATCATA +
Preference number: 5 (lower is better)
Translates to: PGGESETPSGGREVP*LQPSLAFLFHQSII
Trigger: TATGATTGACTGATGAAACAGAAAGGCTAAAGAGGGCTGGAGTCAGGGGACTTCTCTTCCACCAGATGGAGTCTCACTCTCTCCCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563659.5
CDS TCA 90 bp TGTCTCAGCTTGATGCCACTTCAAAGAAATTCCACGCTGCAGGCTTaGAGTCTCCCACATGGCGAAAAAGCACAGCTGGGAGTCGGTAAC +
Preference number: 5 (lower is better)
Translates to: CLSLMPLQRNSTLQA*SLPHGEKAQLGVGN
Trigger: GTTACCGACTCCCAGCTGTGCTTTTTCGCCATGTGGGAGACTTCAAGCCTGCAGCGTGGAATTTCTTTGAAGTGGCATCAAGCTGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS TCA 90 bp CACAGAGATCCTTTCGGCCCGGAGAAAGATGCAGATGTCTCAGCTTaGTGCCACTTCAAAGAAATTCCACGCTGCAGGCTTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: HRDPFGPEKDADVSA*CHFKEIPRCRLEVS
Trigger: GGAGACTTCAAGCCTGCAGCGTGGAATTTCTTTGAAGTGGCATCAAGCTGAGACATCTGCATCTTTCTCCGGGCCGAAAGGATCTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS CCA 90 bp AGGTGGTGGTCTTGGTATTGTGGTCAACATAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCCATAAGGCTGTCGTCCTTGATAGTG +
Preference number: 5 (lower is better)
Translates to: RWWSWYCGQHNRHVR*AALAVPIRLSSLIV
Trigger: CACTATCAAGGACGACAGCCTTATGGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATTATGTTGACCACAATACCAAGACCACCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567579.5
CDS CCA 90 bp AGGTGGTGGTCTTGGTATTGTGGTCAACATAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCCATCTCAGAAACGTGTTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RWWSWYCGQHNRHVR*AALAVPISETCFSL
Trigger: GAGGCTGAAACACGTTTCTGAGATGGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATTATGTTGACCACAATACCAAGACCACCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569297.5
CDS CCA 90 bp ACCTCCGCAGAAAGGGACCGTTTCAAGAAGCCATTGGGTGACTCATaGTGTCAGTTCCAGAGTCTCAGGTCTTCTCAGTTGATGACCTAC +
Preference number: 5 (lower is better)
Translates to: TSAERDRFKKPLGDS*CQFQSLRSSQLMTY
Trigger: GTAGGTCATCAACTGAGAAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCTTTCTGCGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp CCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACAAAAAGACGTTGGAGAGGTaGACAGATGCGGTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: PQKESREPAVDPLKTRYKKTLER*TDAVPS
Trigger: GCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTT...TTTGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CAA 90 bp GGAGCGGCTTCCATGGTAACGTGCCACAGGGAAGTACAGCAAATGACTGAAAGGTTGTTCTTCAAGACGTaGGAGAGGTTGACAGATGCG +
Preference number: 5 (lower is better)
Translates to: GAASMVTCHREVQQMTERLFFKT*ERLTDA
Trigger: CGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAA...CCTTTCAGTCATTTGCTGTACTTCCCTGTGGCACGTTACCATGGAAGCCGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CAA 90 bp TGGATAACTTGGCGGCATTCTCACGAAGCCCTGCCGAATAAGAAGCACTCTGCCTTGTTCTTCAAGACGTaGGAGAGGTTGACAGATGCG +
Preference number: 5 (lower is better)
Translates to: WITWRHSHEALPNKKHSALFFKT*ERLTDA
Trigger: CGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAA...GGCAGAGTGCTTCTTATTCGGCAGGGCTTCGTGAGAATGCCGCCAAGTTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGGAGAGAAGTCGTGTaGGGATTCGGGGTCACACTC +
Preference number: 5 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGREVV*GFGVTL
Trigger: GAGTGTGACCCCGAATCCCAACACGACTTCTCTCCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000359154.7
CDS-3UTR CAA 90 bp GGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTGGGAGAGAAGTCGTGTaGGGATTCGGGGTCACACTC +
Preference number: 5 (lower is better)
Translates to: GKCAYFIQEPFMATLLGGGREVV*GFGVTL
Trigger: GAGTGTGACCCCGAATCCCAACACGACTTCTCTCCC...ACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTTCCAGGTTGTTCTCTTaGATCCAGACAATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPSRLFS*IQTMEL
Trigger: CAACTCCATTGTCTGGATCAAAGAGAACAACCTGGA...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACATGATGTACTCTTCCTaGTTCTCCTCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHMMYSS*FSSVTR
Trigger: CCGGGTCACAGAGGAGAACAAGGAAGAGTACATCAT...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGGAAGATCCAGACGGTaGAAGCAGGTGTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAGRSRR*KQVWLL
Trigger: CAGAAGCCACACCTGCTTCAACCGTCTGGATCTTCC...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGGACAGGGGAGAGTTTaGCAGAGAGGGTCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEGQGRV*QRGSAL
Trigger: GAGGGCTGACCCTCTCTGCAAAACTCTCCCCTGTCC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACGGGATTTCTTCTCTATaGAAGGCGGCAAGGCTAGGA +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHGISSL*KAARLG
Trigger: TCCTAGCCTTGCCGCCTTCAATAGAGAAGAAATCCC...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GAGACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTGGAGTTAATTCGAGGTaGACGATTATGCACCTTGGG +
Preference number: 5 (lower is better)
Translates to: ETHVERTFCPWQTGNQTPGVNSR*TIMHLG
Trigger: CCCAAGGTGCATAATCGTCAACCTCGAATTAACTCC...AGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp GACACATGTGGAAAGAACTTTCTGTCCCTGGCAGACAGGGAACCAAACCCCTTCTCCATTTTGCCCCCATaGTTCTTCAAGACGTTGGAG +
Preference number: 5 (lower is better)
Translates to: DTCGKNFLSLADREPNPFSILPP*FFKTLE
Trigger: CTCCAACGTCTTGAAGAACAATGGGGGCAAAATGGA...GAAGGGGTTTGGTTCCCTGTCTGCCAGGGACAGAAAGTTCTTTCCACATGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp AGGGACCGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGCCTCTCTCATCCTTaGGTTTTGGATAACTTGGCG +
Preference number: 5 (lower is better)
Translates to: RDRFKKPLGDSWCQFQSLSLSHP*VLDNLA
Trigger: CGCCAAGTTATCCAAAACCAAAGGATGAGAGAGGCT...GAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp AGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGATCAGAGGGCCGGATTTaGTCCACAGGCCATCATAGT +
Preference number: 5 (lower is better)
Translates to: SLSLHKLRAGEVCIFYTGSEGRI*STGHHS
Trigger: ACTATGATGGCCTGTGGACAAAATCCGGCCCTCTGA...TCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 90 bp TGTTCTCCATTTTGCCCCCATTGTTCTTCAAGACGTTGGAGAGGTTaGCAGATGCGGTGCCTAGCAGTTCATTTCTCAAGGTATGGCAGC +
Preference number: 5 (lower is better)
Translates to: CSPFCPHCSSRRWRG*QMRCLAVHFSRYGS
Trigger: GCTGCCATACCTTGAGAAATGAACTGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAATGGGGGCAAAATGGAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359154.7
ENST00000544162.5
ENST00000567986.5
ENST00000569174.5
CDS TCA 90 bp CATACGTACTTTTGCCCCCATTGTTCTTCAAGACGTTGGAGAGGTTaGCAGATGCGGTGCCTAGCAGTTCATTTCTCAAGGTATGGCAGC +
Preference number: 5 (lower is better)
Translates to: HTYFCPHCSSRRWRG*QMRCLAVHFSRYGS
Trigger: GCTGCCATACCTTGAGAAATGAACTGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAATGGGGGCAAAAGTACGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569658.1
CDS CCA 90 bp GCCAATGACTGGCTTCCACATTTGAGCGCTTTGCAGGGAATGCAGTaGGACTTTAGGTGGCATCTGCTCCTCTCAAAAGTCTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: ANDWLPHLSALQGMQ*DFRWHLLLSKVSVF
Trigger: AAAAACAGAGACTTTTGAGAGGAGCAGATGCCACCTAAAGTCCCACTGCATTCCCTGCAAAGCGCTCAAATGTGGAAGCCAGTCATTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568185.1
ENST00000568684.1
CDS-3UTR CAA 90 bp AGCCTTTCCCTCCACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGATATGCACCTTGGGCTTaGCGGACACCACTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SLSLHKLRAGEVCIFYTGYAPWA*RTPLSK
Trigger: CTTTGAAAGTGGTGTCCGCAAAGCCCAAGGTGCATA...TCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTGGAGGGAAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp AAGCTAAGCCACTCAAATCAGCACACACGACAGAGGCAGACGCAGGCTGCACCTCATGTTCATGATCTGTaGGAAGGAATCTTCGAAAAG +
Preference number: 5 (lower is better)
Translates to: KLSHSNQHTRQRQTQAAPHVHDL*EGIFEK
Trigger: CTTTTCGAAGATTCCTTCCAACAGATCATGAACATG...AGGTGCAGCCTGCGTCTGCCTCTGTCGTGTGTGCTGATTTGAGTGGCTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GCCTTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAATGATGTACTCTTCCTaGTTCTCCTCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: AFLLVFMSCVQIKPHTYAMMYSS*FSSVTR
Trigger: CCGGGTCACAGAGGAGAACAAGGAAGAGTACATCAT...TGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAAGAGAGGCGTGGCTGTTaGGGAAACTCTTGGACCCAA +
Preference number: 5 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEERRGC*GNSWTQ
Trigger: TTGGGTCCAAGAGTTTCCCAAACAGCCACGCCTCTC...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAAGTACTTTTGCCCCCATaGTTCTTCAAGACGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VTRYPRRSLGNQLWILLKVLLPP*FFKTLE
Trigger: CTCCAACGTCTTGAAGAACAATGGGGGCAAAAGTAC...TTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CAA 90 bp ATACAGGAGCCCTTCATGGCTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGCCTCCCATGCGCCTTTaGTTTCCCAGAGATCTTCTA +
Preference number: 5 (lower is better)
Translates to: IQEPFMATLLGGDSFLEQPPMRL*FPRDLL
Trigger: TAGAAGATCTCTGGGAAACAAAAGGCGCATGGGAGG...CTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCATGAAGGGCTCCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp ATGCATCAACACTCTAAATCTTGGCCTCCCATGCGCCTTTTGTTTCCCAGAGATCCAAACCCCTTCTCCTaGAACTTGGACAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: MHQHSKSWPPMRLLFPRDPNPFS*NLDSLP
Trigger: GGGAAGACTGTCCAAGTTCAAGGAGAAGGGGTTTGG...ATCTCTGGGAAACAAAAGGCGCATGGGAGGCCAAGATTTAGAGTGTTGATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 90 bp TCCCTTAATCTCTCTTCCCTGCCATGGATCTCTCCAATTCTTTTCTaGGTGAGTCTGCTGCTATTTTCAGCCAGTTCCACTGAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: SLNLSSLPWISPILF*VSLLLFSASSTEGL
Trigger: AAGGCCCTCAGTGGAACTGGCTGAAAATAGCAGCAGACTCACTCAGAAAAGAATTGGAGAGATCCATGGCAGGGAAGAGAGATTAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000563618.5
CDS-3UTR CAA 90 bp ATGGCTACTTTACTGGGAGGTGATTCTTTCTTGGAGCAGAATACATCCCCTTTTAAGACGTTGGAGAGGTaGACAGATGCGGTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: MATLLGGDSFLEQNTSPFKTLER*TDAVPS
Trigger: GCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTT...AAAAGGGGATGTATTCTGCTCCAAGAAAGAATCACCTCCCAGTAAAGTAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp CCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAACAAGATACAAATTGTTCTTCAAGACGTaGGAGAGGTTGACAGATGCG +
Preference number: 5 (lower is better)
Translates to: PQKESREPAVDPLKTRYKLFFKT*ERLTDA
Trigger: CGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAA...TTTGTATCTTGTTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CAA 90 bp ACAAGAAACTGGCAATATCGAGGCAAGGGGCGGGCATTACAAAACAATCTGGTGTCCATTTTGCCCCCATaGTTCTTCAAGACGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TRNWQYRGKGRALQNNLVSILPP*FFKTLE
Trigger: CTCCAACGTCTTGAAGAACAATGGGGGCAAAATGGA...CACCAGATTGTTTTGTAATGCCCGCCCCTTGCCTCGATATTGCCAGTTTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CAA 90 bp CACAAACTCAGGGCAGGGGAAGTGTGCATATTTTATACAGGAGCCCTTCATGGCTGCATGTTCTCCATTTaGCCCCCATTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: HKLRAGEVCIFYTGALHGCMFSI*PPLFFK
Trigger: CTTGAAGAACAATGGGGGCAAAATGGAGAACATGCA...GCCATGAAGGGCTCCTGTATAAAATATGCACACTTCCCCTGCCCTGAGTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp AAGGGACAGAAGAGGCTGCGCTGTGGCAAGCTAAGCCACTCAAATCAGCACACACATGTTCATGATCTGTaGGAAGGAATCTTCGAAAAG +
Preference number: 5 (lower is better)
Translates to: KGQKRLRCGKLSHSNQHTHVHDL*EGIFEK
Trigger: CTTTTCGAAGATTCCTTCCAACAGATCATGAACATG...TGTGTGCTGATTTGAGTGGCTTAGCTTGCCACAGCGCAGCCTCTTCTGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGCAGCCAGGTTTCCTaGCCAACTTTGTCAATGCAA +
Preference number: 5 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGSQVS*PTLSMQ
Trigger: TTGCATTGACAAAGTTGGCAAGGAAACCTGGCTGCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp CAGACACTTCAGTTATATACACGTACGCACACACACGCACGAACACACATGAACGGGATTTCTTCTCTATaGAAGGCGGCAAGGCTAGGA +
Preference number: 5 (lower is better)
Translates to: QTLQLYTRTHTHARTHMNGISSL*KAARLG
Trigger: TCCTAGCCTTGCCGCCTTCAATAGAGAAGAAATCCC...GTTCATGTGTGTTCGTGCGTGTGTGTGCGTACGTGTATATAACTGAAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp ATTTGGGATTTGCTTCAAAATTACCTAGATCAGGGTGCGGCGGATAGGTTGGGGTTGGTTTTGGATAACTaGGCGGCATTCTCACGAAGC +
Preference number: 5 (lower is better)
Translates to: IWDLLQNYLDQGAADRLGLVLDN*AAFSRS
Trigger: GCTTCGTGAGAATGCCGCCAAGTTATCCAAAACCAA...CCCCAACCTATCCGCCGCACCCTGATCTAGGTAATTTTGAAGCAAATCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp CGTTTCAAGAAGCCATTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTCTCATCCTTTGGTTTaGGATAACTTGGCGGCATTC +
Preference number: 5 (lower is better)
Translates to: RFKKPLGDSWCQFQSLRSSHPLV*DNLAAF
Trigger: GAATGCCGCCAAGTTATCCAAAACCAAAGGATGAGA...AGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAATGGCTTCTTGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS-3UTR CAA 90 bp TTTCTGCTGGTTTTCATGTCCTGTGTGCAGATAAAGCCTCACACCTATGCAGAATATGCACCTTGGGCTTaGCGGACACCACTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: FLLVFMSCVQIKPHTYAEYAPWA*RTPLSK
Trigger: CTTTGAAAGTGGTGTCCGCAAAGCCCAAGGTGCATA...TTCTGCATAGGTGTGAGGCTTTATCTGCACACAGGACATGAAAACCAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359154.7
CDS-3UTR CAA 90 bp CAAAACAATCTGGTGACCAGCCCATGGCTAGCAAAGGGCATTCCGTACAGACACCATGTTCATGATCTGTaGGAAGGAATCTTCGAAAAG +
Preference number: 5 (lower is better)
Translates to: QNNLVTSPWLAKGIPYRHHVHDL*EGIFEK
Trigger: CTTTTCGAAGATTCCTTCCAACAGATCATGAACATG...GTGTCTGTACGGAATGCCCTTTGCTAGCCATGGGCTGGTCACCAGATTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000568684.1
CDS-3UTR CAA 90 bp GTAACAAGGTACCCCAGAAGGAGTCTCGGGAACCAGCTGTGGATCCTCTTAAAAAAGATTTCATCCGTCTaGGTAAATCTCTCAAGCCGT +
Preference number: 5 (lower is better)
Translates to: VTRYPRRSLGNQLWILLKKISSV*VNLSSR
Trigger: ACGGCTTGAGAGATTTACCAAGACGGATGAAATCTT...TTTTAAGAGGATCCACAGCTGGTTCCCGAGACTCCTTCTGGGGTACCTTGTTAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569620.5
CDS-3UTR CAA 90 bp ACAGCCAAAAACAATAAGTCAACAAATATGTGTGGCTGTGTTCCAATAAAACCTTTCCCAGATCAACAGTaGGCCCGTCCAGGAAAATTG +
Preference number: 5 (lower is better)
Translates to: TAKNNKSTNMCGCVPIKPFPDQQ*ARPGKL
Trigger: CAATTTTCCTGGACGGGCCAACTGTTGATCTGGGAA...AGGTTTTATTGGAACACAGCCACACATATTTGTTGACTTATTGTTTTTGGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 90 bp AGTTCATTTCTCAAGGTATGGCAGCTCCAGACCTTTAAATCTAAATaGCTCTGTGCCGTGACATTCCTGAAAAACAAATACCTGATTCAT +
Preference number: 5 (lower is better)
Translates to: SSFLKVWQLQTFKSK*LCAVTFLKNKYLIH
Trigger: ATGAATCAGGTATTTGTTTTTCAGGAATGTCACGGCACAGAGTCATTTAGATTTAAAGGTCTGGAGCTGCCATACCTTGAGAAATGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567986.5
CDS GCA 72 bp CATGGTAGGAAGGCCCGGGAAGCAGGCTCGGCCCAGTaGCTCCGCTCAGCTCCGGCTCAAGGCGGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: HGRKAREAGSAQ*LRSAPAQGGQG
Trigger: GCCTTGGCCGCCTTGAGCCGGAGCTGAGCGGAGGCACTGGGCCGAGCCTGCTTCCCGGGCCTTCCTACCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568185.1
ENST00000568684.1
CDS CCA 72 bp ACCCACTGCTCAGGGGTGGCTCCCGGCCAGGCCGCGTaGCCGTTACCGCGCAGGACCACCAGATCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: THCSGVAPGQAA*PLPRRTTRSAE
Trigger: CTCTGCTGATCTGGTGGTCCTGCGCGGTAACGGCCACGCGGCCTGGCCGGGAGCCACCCCTGAGCAGTGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567303.1
CDS CAA 90 bp CGGGCTGGCGGTGCCGGCTCCGAGCACCGGGGCTTTGCTCGCCGGTaGCTGGGGTTGTTCTGGCTGAAGCACCCGAATGTCTGTGCGTCC +
Preference number: 6 (lower is better)
Translates to: RAGGAGSEHRGFARR*LGLFWLKHPNVCAS
Trigger: GGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS GCA 72 bp ACGGGCTGGCGGTGCCGGCTCCGAGCACCGGGGCTTTaGTCGCCGGTTGCTGGGGTTGTTCTGGCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: TGWRCRLRAPGL*SPVAGVVLAEA
Trigger: TGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 72 bp CGCTGTTCCCATCCAGCAGGCAGAGCGTCGGGGGCCTaGGCAGCCGCTGGGAGCTGCTGTGTACCCGAAGTG +
Preference number: 6 (lower is better)
Translates to: RCSHPAGRASGA*AAAGSCCVPEV
Trigger: CACTTCGGGTACACAGCAGCTCCCAGCGGCTGCCCAGGCCCCCGACGCTCTGCCTGCTGGATGGGAACAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS GCA 72 bp AAGCCACTGTGGCCTGAGTTCTTGACGGGCTGGCGGTaGCGGCTCCGAGCACCGGGGCTTTGCTCGCCGGTT +
Preference number: 6 (lower is better)
Translates to: KPLWPEFLTGWR*RLRAPGLCSPV
Trigger: AACCGGCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS GCA 72 bp CCTGGGCAGCCGCTGGGAGCTGCTGTGTACCCGAAGTaGTGGGTTCCTCTCCTTCAGCCGGTGTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: PGQPLGAAVYPK*WVPLLQPVWLG
Trigger: CCCCAGCCACACCGGCTGAAGGAGAGGAACCCAGCACTTCGGGTACACAGCAGCTCCCAGCGGCTGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 72 bp GGGCAGCCGCTGGGAGCTGCTGTGTACCCGAAGTGCTaGGTTCCTCTCCTTCAGCCGGTGTGGCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: GQPLGAAVYPKC*VPLLQPVWLGQ
Trigger: CTGCCCCAGCCACACCGGCTGAAGGAGAGGAACCCAGCACTTCGGGTACACAGCAGCTCCCAGCGGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS CAA 72 bp GGTGCCGGCTCCGAGCACCGGGGCTTTGCTCGCCGGTaGCTGGGGTTGTTCTGGCTGAAGCACCCGAATGTC +
Preference number: 6 (lower is better)
Translates to: GAGSEHRGFARR*LGLFWLKHPNV
Trigger: GACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTGCTCGGAGCCGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS GCA 72 bp GGAGCTGATTCCGCTGCGACTGCCACTGCTCATAGTTaGGCACGTACTCCGCGGTCGGACGCTGCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: GADSAATATAHS*ARTPRSDAARW
Trigger: CCACCTGGCAGCGTCCGACCGCGGAGTACGTGCGCAACTATGAGCAGTGGCAGTCGCAGCGGAATCAGCTCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567579.5
ENST00000569297.5
CDS CCA 72 bp CTGCAGTGTGGGTTTAACAGGCCACGCGATAGGAGATaGGGTGCTGGGAGGAGGGCGTCGGCCTGCCACTGG +
Preference number: 6 (lower is better)
Translates to: LQCGFNRPRDRR*GAGRRASACHW
Trigger: CCAGTGGCAGGCCGACGCCCTCCTCCCAGCACCCCATCTCCTATCGCGTGGCCTGTTAAACCCACACTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS CCA 72 bp CACCGGGGCTTTGCTCGCCGGTTGCTGGGGTTGTTCTaGCTGAAGCACCCGAATGTCTGTGCGTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: HRGFARRLLGLF*LKHPNVCASWG
Trigger: CCCCCAGGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570104.1
CDS TCA 72 bp CGGCAAATCCCCCGACGGGCAGGCGGCAGGTACCGGTaGCAAACTGCAGCAGCCGGATCCTCTTCTCGTTGT +
Preference number: 6 (lower is better)
Translates to: RQIPRRAGGRYR*QTAAAGSSSRC
Trigger: ACAACGAGAAGAGGATCCGGCTGCTGCAGTTTGTCACCGGTACCTGCCGCCTGCCCGTCGGGGGATTTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567303.1
ENST00000568684.1
ENST00000569297.5
CDS GCA 72 bp AGGCAGGGCCACTCCTGCCCGGCTAGAGCTGGCAGATaGCATATCATCACCGTGAAGCTGCCGTGGCCACAG +
Preference number: 6 (lower is better)
Translates to: RQGHSCPARAGR*HIITVKLPWPQ
Trigger: CTGTGGCCACGGCAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359154.7
ENST00000568845.5
ENST00000569658.1
CDS CCA 72 bp CACCGGGGCTTTGCTCGCCGGTTGCTGGGGTTGTTCTaGCTGAAGCACCCGAATGTCTGTGCGTCCGGGATC +
Preference number: 6 (lower is better)
Translates to: HRGFARRLLGLF*LKHPNVCASGI
Trigger: GATCCCGGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
CDS CCA 72 bp GTGACCCGGATGCTCTCGCCGCCCTCCTTCAGCTCGTaGGTCGTCACCTTGCCCAGTATCTCCATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VTRMLSPPSFSS*VVTLPSISMSW
Trigger: CCAGGACATGGAGATACTGGGCAAGGTGACGACCCACGAGCTGAAGGAGGGCGGCGAGAGCATCCGGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567161.1
ENST00000568684.1
ENST00000569297.5
CDS CAA 90 bp TCATCATTCACTGTGCCATTGGCCAAGCCACTGTGGCCTGAGTTCTaGACGGGCTGGCGGTGCCGGCTCCGAGCACCGGGGCTTTGCTCG +
Preference number: 6 (lower is better)
Translates to: SSFTVPLAKPLWPEF*TGWRCRLRAPGLCS
Trigger: CGAGCAAAGCCCCGGTGCTCGGAGCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAATGGCACAGTGAATGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CAA 90 bp GGAGCGGAGCCCCCGGCGCCTGAGACTCACATGATGTACTCTTCCTaGTTCTCCTCTGTGACCCGGATGCTCTCGCCGCCCTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: GAEPPAPETHMMYSS*FSSVTRMLSPPSFS
Trigger: GCTGAAGGAGGGCGGCGAGAGCATCCGGGTCACAGAGGAGAACAAGGAAGAGTACATCATGTGAGTCTCAGGCGCCGGGGGCTCCGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS CAA 90 bp AGCCACTCCAGCGGGGCCACCTCGTTGAAGCCATCCAGGAAGGCTTaGGTCTGCTCTTCCACGCCTCGGGTGAAACGCCAGTCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: SHSSGATSLKPSRKA*VCSSTPRVKRQSVS
Trigger: GCTGACTGACTGGCGTTTCACCCGAGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGCTGGAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567303.1
ENST00000568684.1
ENST00000569297.5
CDS TCA 72 bp GGGGCTTTGCTCGCCGGTTGCTGGGGTTGTTCTGGCTaGAGCACCCGAATGTCTGTGCGTCCGGGATCTTCC +
Preference number: 6 (lower is better)
Translates to: GALLAGCWGCSG*STRMSVRPGSS
Trigger: GGAAGATCCCGGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGCAACCGGCGAGCAAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS TCA 72 bp TCTCCACGCCACCCCTGGAGCGGAGCCCCCGGCGCCTaGGACTCACATGATGTACTCTTCCTTGTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SPRHPWSGAPGA*DSHDVLFLVLL
Trigger: GAGGAGAACAAGGAAGAGTACATCATGTGAGTCTCAGGCGCCGGGGGCTCCGCTCCAGGGGTGGCGTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS TCA 72 bp ACCTCGGCTTTGGTTCCCCCAGCTCGCGCCATCACATaGCCGCCCACCAGCAGCCACCATCAAGGCAAATGC +
Preference number: 6 (lower is better)
Translates to: TSALVPPARAIT*PPTSSHHQGKC
Trigger: GCATTTGCCTTGATGGTGGCTGCTGGTGGGCGGTCATGTGATGGCGCGAGCTGGGGGAACCAAAGCCGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS CAA 72 bp TCAGCCGGTGTGGCTGGGGCAGGGAGAGAAGTCGTGTaGGGATTCGGGGTCACACTCAAGGGTGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: SAGVAGAGREVV*GFGVTLKGAAG
Trigger: ACCTGCTGCACCCTTGAGTGTGACCCCGAATCCCAACACGACTTCTCTCCCTGCCCCAGCCACACCGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS CAA 72 bp AGCGGGGCCACCTCGTTGAAGCCATCCAGGAAGGCTTaGGTCTGCTCTTCCACGCCTCGGGTGAAACGCCAG +
Preference number: 6 (lower is better)
Translates to: SGATSLKPSRKA*VCSSTPRVKRQ
Trigger: CTGGCGTTTCACCCGAGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGGCTTCAACGAGGTGGCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567303.1
ENST00000568684.1
ENST00000569297.5
CDS CAA 90 bp ACCCGGATGCTCTCGCCGCCCTCCTTCAGCTCGTGGGTCGTCACCTaGCCCAGTATCTCCATGTCCTGGATGAAGTACAGCTCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: TRMLSPPSFSSWVVT*PSISMSWMKYSSRP
Trigger: TGGCCTGGAGCTGTACTTCATCCAGGACATGGAGATACTGGGCAAGGTGACGACCCACGAGCTGAAGGAGGGCGGCGAGAGCATCCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567161.1
ENST00000568684.1
ENST00000569297.5
CDS CCA 72 bp TGTGCGTCCGGGATCTTCCACCAAAGCAGTTTGTGCTaGGGGGCTGGTGCCGGTTCTCTGGAGCTACTGCTG +
Preference number: 6 (lower is better)
Translates to: CASGIFHQSSLC*GAGAGSLELLL
Trigger: CAGCAGTAGCTCCAGAGAACCGGCACCAGCCCCCCAGCACAAACTGCTTTGGTGGAAGATCCCGGACGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS CCA 72 bp GGTTCATCATTCACTGTGCCATTGGCCAAGCCACTGTaGCCTGAGTTCTTGACGGGCTGGCGGTGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: GSSFTVPLAKPL*PEFLTGWRCRL
Trigger: GAGCCGGCACCGCCAGCCCGTCAAGAACTCAGGCCACAGTGGCTTGGCCAATGGCACAGTGAATGATGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 72 bp TACCCGAAGTGCTGGGTTCCTCTCCTTCAGCCGGTGTaGCTGGGGCAGGGAGAGAAGTCGTGTTGGGATTCG +
Preference number: 6 (lower is better)
Translates to: YPKCWVPLLQPV*LGQGEKSCWDS
Trigger: CGAATCCCAACACGACTTCTCTCCCTGCCCCAGCCACACCGGCTGAAGGAGAGGAACCCAGCACTTCGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS TCA 72 bp AGAGCCGGCGGCGCAGGTCATAGGGTTTCATGTTCATaGTCTGGGAAGACAGAGCATCGGGCCAGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: RAGGAGHRVSCS*SGKTEHRASLP
Trigger: TGGCAGGCTGGCCCGATGCTCTGTCTTCCCAGATCATGAACATGAAACCCTATGACCTGCGCCGCCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS TCA 72 bp CTCCGCTCAGCTCCGGCTCAAGGCGGCCAAGGCGACTaGAATCACCACCACCTCCAACTTTCTCCAAGAACC +
Preference number: 6 (lower is better)
Translates to: LRSAPAQGGQGD*NHHHLQLSPRT
Trigger: GGTTCTTGGAGAAAGTTGGAGGTGGTGGTGATTTCAGTCGCCTTGGCCGCCTTGAGCCGGAGCTGAGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568684.1
CDS TCA 72 bp GCCCGGCTAGAGCTGGCAGATGCCATATCATCACCGTaGAGCTGGTGGAAGAGAAGTCCCCTGACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ARLELADAISSP*SWWKRSPLTPA
Trigger: GGCTGGAGTCAGGGGACTTCTCTTCCACCAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 72 bp GTGGCCTGGACTAGGCTGGGACCTTTCAAAGTGAGCTaGGACTTCTCAAAAGGCAGGGCCACTCCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: VAWTRLGPFKVS*DFSKGRATPAR
Trigger: CCGGGCAGGAGTGGCCCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGGTCCCAGCCTAGTCCAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568845.5
CDS GCA 72 bp GCCACCTCGTTGAAGCCATCCAGGAAGGCTTTGGTCTaGTCTTCCACGCCTCGGGTGAAACGCCAGTCAGTC +
Preference number: 6 (lower is better)
Translates to: ATSLKPSRKALV*SSTPRVKRQSV
Trigger: GACTGACTGGCGTTTCACCCGAGGCGTGGAAGAGCAGACCAAAGCCTTCCTGGATGGCTTCAACGAGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567303.1
ENST00000568684.1
ENST00000569297.5
CDS CCA 72 bp AGCTCCCAATGCGCTTCCCAGTCTTCTTGGTCTCACTaGGGAGTCCATCCACCGCCACCTCCACGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: SSQCASQSSWSH*GVHPPPPPRRS
Trigger: ACTCCTACGTGGAGGTGGCGGTGGATGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGCGCATTGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359154.7
ENST00000561780.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS CCA 72 bp GTTGGGATTCGGGGTCACACTCAAGGGTGCAGCAGGTaGGGACGTCACACCAACAACGGAAGGTTCTTCGGG +
Preference number: 6 (lower is better)
Translates to: VGIRGHTQGCSR*GRHTNNGRFFG
Trigger: CCCGAAGAACCTTCCGTTGTTGGTGTGACGTCCCCACCTGCTGCACCCTTGAGTGTGACCCCGAATCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CAA 72 bp AGAAGCTCAGAGCTCCCAATGCGCTTCCCAGTCTTCTaGGTCTCACTGGGGAGTCCATCCACCGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: RSSELPMRFPVF*VSLGSPSTATS
Trigger: GGAGGTGGCGGTGGATGGACTCCCCAGTGAGACCAAGAAGACTGGGAAGCGCATTGGGAGCTCTGAGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359154.7
ENST00000561780.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS CAA 72 bp CTCTCGCCGCCCTCCTTCAGCTCGTGGGTCGTCACCTaGCCCAGTATCTCCATGTCCTGGATGAAGTACAGC +
Preference number: 6 (lower is better)
Translates to: LSPPSFSSWVVT*PSISMSWMKYS
Trigger: GCTGTACTTCATCCAGGACATGGAGATACTGGGCAAGGTGACGACCCACGAGCTGAAGGAGGGCGGCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567161.1
ENST00000568684.1
ENST00000569297.5
CDS CAA 90 bp TTGGGTGACTCATGGTGTCAGTTCCAGAGTCTCAGGTCTTCTCAGTaGATGACCTACCCTGGAGGAAGGGGCCGCTCCCAGGTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: LGDSWCQFQSLRSSQ*MTYPGGRGRSQVVV
Trigger: GACCACCACCTGGGAGCGGCCCCTTCCTCCAGGGTAGGTCATCAACTGAGAAGACCTGAGACTCTGGAACTGACACCATGAGTCACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 72 bp GCCCGGCTAGAGCTGGCAGATGCCATATCATCACCGTaGAGCTGTAATCCCAGGTATCCGGAGGCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: ARLELADAISSP*SCNPRYPEAEA
Trigger: TGCCTCAGCCTCCGGATACCTGGGATTACAGCTTCACGGTGATGATATGGCATCTGCCAGCTCTAGCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561780.5
ENST00000563659.5
ENST00000569620.5
CDS GCA 72 bp CCACTCCCATCCCCCAATTCTAGAAAAGTCTCAGGATaGCTAGCACAGCCGGGCAGGCCCTGTCACAGAGGT +
Preference number: 6 (lower is better)
Translates to: PLPSPNSRKVSG*LAQPGRPCHRG
Trigger: ACCTCTGTGACAGGGCCTGCCCGGCTGTGCTAGGCATCCTGAGACTTTTCTAGAATTGGGGGATGGGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566463.5
CDS TCA 72 bp ACCTTGGGCTTTGCGGACACCACTTTCAAAGTGAGCTaGGACTTCTCAAAAGGCAGGGCCACTCCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: TLGFADTTFKVS*DFSKGRATPAR
Trigger: CCGGGCAGGAGTGGCCCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGTGGTGTCCGCAAAGCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359154.7
ENST00000561780.5
ENST00000563659.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS CCA 72 bp GCTGGTGCCGGTTCTCTGGAGCTACTGCTGTTCCACTaGAGTCTCTCGAAGGCAGCTGTGATCCATCTGTCA +
Preference number: 6 (lower is better)
Translates to: AGAGSLELLLFH*SLSKAAVIHLS
Trigger: TGACAGATGGATCACAGCTGCCTTCGAGAGACTCCAGTGGAACAGCAGTAGCTCCAGAGAACCGGCACCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS CCA 72 bp CTCCAGCCCTCTTTAGCCTTTCTGTTTCATCTGCCGTaGCCACAGAAGCGGCGCCGAACTCCTCTCCTACTT +
Preference number: 6 (lower is better)
Translates to: LQPSLAFLFHLP*PQKRRRTPLLL
Trigger: AAGTAGGAGAGGAGTTCGGCGCCGCTTCTGTGGCCACGGCAGATGAAACAGAAAGGCTAAAGAGGGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561780.5
ENST00000569620.5
CDS CCA 72 bp AGAGACAGGACAGGAGGCTACTGCCTTAACTCAGGGTaGAGACAATGGTGGCCTGGACTAGGCTGGGACCTT +
Preference number: 6 (lower is better)
Translates to: RDRTGGYCLNSG*RQWWPGLGWDL
Trigger: AAGGTCCCAGCCTAGTCCAGGCCACCATTGTCTCCACCCTGAGTTAAGGCAGTAGCCTCCTGTCCTGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568845.5
CDS CAA 72 bp AAACGCCAGTCAGTCAGCAGCATGATGTACTCTTCCTaGTTCTCCTCTGTGACCCGGATGCTCTCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: KRQSVSSMMYSS*FSSVTRMLSPP
Trigger: GGGCGGCGAGAGCATCCGGGTCACAGAGGAGAACAAGGAAGAGTACATCATGCTGCTGACTGACTGGCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000568684.1
ENST00000569297.5
CDS CAA 72 bp TCATGGTGTCAGTTCCAGAGTCTCAGGTCTTCTCAGTaGATGACCTACCCTGGAGGAAGGGGCCGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SWCQFQSLRSSQ*MTYPGGRGRSQ
Trigger: CTGGGAGCGGCCCCTTCCTCCAGGGTAGGTCATCAACTGAGAAGACCTGAGACTCTGGAACTGACACCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569174.5
CDS TCA 72 bp TCGAAGCACTCGAAGACTGGTAGAGGAATCTTTGGCTaGAGTGCTGCATGGCCCCCTGGAGCTGATTCCGCT +
Preference number: 6 (lower is better)
Translates to: SKHSKTGRGIFG*SAAWPPGADSA
Trigger: AGCGGAATCAGCTCCAGGGGGCCATGCAGCACTTCAGCCAAAGATTCCTCTACCAGTCTTCGAGTGCTTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567579.5
ENST00000569297.5
CDS TCA 72 bp AGGAGGGCGTCGGCCTGCCACTGGTTTCGGGCACCATaGTCTAACCTGTTGGAAGGAATCTTCGAAAAGCGT +
Preference number: 6 (lower is better)
Translates to: RRASACHWFRAP*SNLLEGIFEKR
Trigger: ACGCTTTTCGAAGATTCCTTCCAACAGGTTAGATCATGGTGCCCGAAACCAGTGGCAGGCCGACGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS TCA 72 bp CAATGGTGGCCTGGACTAGGCTGGGACCTTTCAAAGTaGGCTGAGACTTCTCAAAAGGCAGGGCCACTCCTG +
Preference number: 6 (lower is better)
Translates to: QWWPGLGWDLSK*AETSQKAGPLL
Trigger: CAGGAGTGGCCCTGCCTTTTGAGAAGTCTCAGCTCACTTTGAAAGGTCCCAGCCTAGTCCAGGCCACCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568845.5
CDS GCA 72 bp CCAGGAAAATTGTCAGCTCTCCGCCTGAGACAACGCTaGCTTTGTTCTCCGTCTGCAGGTTCAGGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: PGKLSALRLRQR*LCSPSAGSGSA
Trigger: AGCTGACCCTGAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACAATTTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS GCA 72 bp ATGGTGCTCTTCTGCCAGTCGCTCATGTCTATCTCCTaGATGCCGCACAGCATCAGCTCCAGCTCTTTCTCG +
Preference number: 6 (lower is better)
Translates to: MVLFCQSLMSIS*MPHSISSSSFS
Trigger: CGAGAAAGAGCTGGAGCTGATGCTGTGCGGCATGCAGGAGATAGACATGAGCGACTGGCAGAAGAGCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567303.1
ENST00000568684.1
ENST00000569297.5
CDS GCA 72 bp GCTGGGGTTGTTCTGGCTGAAGCACCCGAATGTCTGTaGGTCCTGGGGGTTCAAAGTAGAAAGCAGACAGAC +
Preference number: 6 (lower is better)
Translates to: AGVVLAEAPECL*VLGVQSRKQTD
Trigger: GTCTGTCTGCTTTCTACTTTGAACCCCCAGGACGCACAGACATTCGGGTGCTTCAGCCAGAACAACCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570104.1
CDS GCA 72 bp AACAGAGGTACTGCAGCCCCTAGTCCTGGGGGAAATTaGAATACCAGGTTGATCTGCCAGGTCCTCCCATCC +
Preference number: 6 (lower is better)
Translates to: NRGTAAPSPGGN*NTRLICQVLPS
Trigger: GGATGGGAGGACCTGGCAGATCAACCTGGTATTGCAATTTCCCCCAGGACTAGGGGCTGCAGTACCTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569658.1
CDS GCA 72 bp TGCTCTTCTGCCAGTCGCTCATGTCTATCTCCTGCATaGCGCACAGCATCAGCTCCAGCTCTTTCTCGTCAA +
Preference number: 6 (lower is better)
Translates to: CSSASRSCLSPA*RTASAPALSRQ
Trigger: TTGACGAGAAAGAGCTGGAGCTGATGCTGTGCGGCATGCAGGAGATAGACATGAGCGACTGGCAGAAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567303.1
ENST00000568684.1
ENST00000569297.5
CDS GCA 72 bp CAGACACAGTCACCAAGACTCACGCCCTGGAAAGTCTaGAGTGTGGGTTTAACAGGCCACGCGATAGGAGAT +
Preference number: 6 (lower is better)
Translates to: QTQSPRLTPWKV*SVGLTGHAIGD
Trigger: ATCTCCTATCGCGTGGCCTGTTAAACCCACACTGCAGACTTTCCAGGGCGTGAGTCTTGGTGACTGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS CCA 72 bp TCGGTTACTCCTGTCCAAAGCCCTCGGTCTCCTCAATaGCATACAGCAGCTTCTCTCTCAGCTGTTCGTAGC +
Preference number: 6 (lower is better)
Translates to: SVTPVQSPRSPQ*HTAASLSAVRS
Trigger: GCTACGAACAGCTGAGAGAGAAGCTGCTGTATGCCATTGAGGAGACCGAGGGCTTTGGACAGGAGTAACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000568684.1
ENST00000569297.5
CDS CCA 72 bp AATATCCAGCAGACACAGTCACCAAGACTCACGCCCTaGAAAGTCTGCAGTGTGGGTTTAACAGGCCACGCG +
Preference number: 6 (lower is better)
Translates to: NIQQTQSPRLTP*KVCSVGLTGHA
Trigger: CGCGTGGCCTGTTAAACCCACACTGCAGACTTTCCAGGGCGTGAGTCTTGGTGACTGTGTCTGCTGGATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568818.1
CDS CCA 72 bp AGGCTTGAAGTCTCCCACATGGCGAAAAAGCACAGCTaGGAGTCGGTAACTAAGGACCTCGGCTTTGGTTCC +
Preference number: 6 (lower is better)
Translates to: RLEVSHMAKKHS*ESVTKDLGFGS
Trigger: GGAACCAAAGCCGAGGTCCTTAGTTACCGACTCCCAGCTGTGCTTTTTCGCCATGTGGGAGACTTCAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS CAA 72 bp ATCCACCGCCACCTCCACGTAGGAGTTAATTCGAGGTaGACGATTATGCACCTTGGGCTTTGCGGACACCAC +
Preference number: 6 (lower is better)
Translates to: IHRHLHVGVNSR*TIMHLGLCGHH
Trigger: GTGGTGTCCGCAAAGCCCAAGGTGCATAATCGTCAACCTCGAATTAACTCCTACGTGGAGGTGGCGGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359154.7
ENST00000561780.5
ENST00000563659.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS CAA 72 bp AAAATTGTCAGCTCTCCGCCTGAGACAACGCTGCCTTaGTTCTCCGTCTGCAGGTTCAGGGTCAGCTGCATG +
Preference number: 6 (lower is better)
Translates to: KIVSSPPETTLP*FSVCRFRVSCM
Trigger: CATGCAGCTGACCCTGAACCTGCAGACGGAGAACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS CAA 72 bp GTCAGTCGAAGCACTCGAAGACTGGTAGAGGAATCTTaGGCTGAAGTGCTGCATGGCCCCCTGGAGCTGATT +
Preference number: 6 (lower is better)
Translates to: VSRSTRRLVEES*AEVLHGPLELI
Trigger: AATCAGCTCCAGGGGGCCATGCAGCACTTCAGCCAAAGATTCCTCTACCAGTCTTCGAGTGCTTCGACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567579.5
ENST00000569297.5
CDS CAA 90 bp GGGGAGTCCATCCACCGCCACCTCCACGTAGGAGTTAATTCGAGGTaGACGATTATGCACCTTGGGCTTTGCGGACACCACTTTCAAAGT +
Preference number: 6 (lower is better)
Translates to: GESIHRHLHVGVNSR*TIMHLGLCGHHFQS
Trigger: ACTTTGAAAGTGGTGTCCGCAAAGCCCAAGGTGCATAATCGTCAACCTCGAATTAACTCCTACGTGGAGGTGGCGGTGGATGGACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359154.7
ENST00000561780.5
ENST00000563659.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS GCA 72 bp AGAGGAAACGGAACTGGTGATACTTCCACCGAAAACTaGGGTCATAAGCACCAGGGGAACCTTGCTTCGTCC +
Preference number: 6 (lower is better)
Translates to: RGNGTGDTSTEN*GHKHQGNLASS
Trigger: GGACGAAGCAAGGTTCCCCTGGTGCTTATGACCGCAGTTTTCGGTGGAAGTATCACCAGTTCCGTTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000568684.1
ENST00000568818.1
ENST00000569297.5
CDS CCA 72 bp TCTTGGTATTGTGGTCAACATAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCCATCCAGCAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: SWYCGQHNRHVR*AALAVPIQQAE
Trigger: CTCTGCCTGCTGGATGGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATTATGTTGACCACAATACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 72 bp TCGAAAAGCGTCTGCCTGGAAACGCTGATCTTCACGTaGCTAGGTAGGGCATTTGAATGGCAGAGGAAACGG +
Preference number: 6 (lower is better)
Translates to: SKSVCLETLIFT*LGRAFEWQRKR
Trigger: CCGTTTCCTCTGCCATTCAAATGCCCTACCTAGCCACGTGAAGATCAGCGTTTCCAGGCAGACGCTTTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000568684.1
ENST00000568818.1
ENST00000569297.5
CDS CCA 72 bp GGATCTGCTTGCTGTTCTTGGTGTAGTGCCGGTAGATaGTGCTCTTCTGCCAGTCGCTCATGTCTATCTCCT +
Preference number: 6 (lower is better)
Translates to: GSACCSWCSAGR*CSSASRSCLSP
Trigger: AGGAGATAGACATGAGCGACTGGCAGAAGAGCACCATCTACCGGCACTACACCAAGAACAGCAAGCAGATCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000566463.5
ENST00000567303.1
ENST00000568684.1
ENST00000569297.5
CDS CAA 72 bp CATTTCCCAGATCAACAGTTGGCCCGTCCAGGAAAATaGTCAGCTCTCCGCCTGAGACAACGCTGCCTTTGT +
Preference number: 6 (lower is better)
Translates to: HFPDQQLARPGK*SALRLRQRCLC
Trigger: ACAAAGGCAGCGTTGTCTCAGGCGGAGAGCTGACAATTTTCCTGGACGGGCCAACTGTTGATCTGGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000567986.5
ENST00000569174.5
CDS TCA 72 bp GAGAGTGAGACTCCATCTGGTGGAAGAGAAGTCCCCTaGCTCCAGCCCTCTTTAGCCTTTCTGTTTCATCAG +
Preference number: 6 (lower is better)
Translates to: ESETPSGGREVP*LQPSLAFLFHQ
Trigger: CTGATGAAACAGAAAGGCTAAAGAGGGCTGGAGTCAGGGGACTTCTCTTCCACCAGATGGAGTCTCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563659.5
CDS TCA 72 bp GAGAGTGAGACTCCATCTGGTGGAAGAGAAGTCCCCTaGCTCCAGCCCTCTTTAGCCTTTCTGTTTCATCTG +
Preference number: 6 (lower is better)
Translates to: ESETPSGGREVP*LQPSLAFLFHL
Trigger: CAGATGAAACAGAAAGGCTAAAGAGGGCTGGAGTCAGGGGACTTCTCTTCCACCAGATGGAGTCTCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561780.5
ENST00000569620.5
CDS CCA 72 bp ACGTCACACCAACAACGGAAGGTTCTTCGGGATCAGTaGCTGTTGTGGGTTCATCATTCACTGTGCCATTGG +
Preference number: 6 (lower is better)
Translates to: TSHQQRKVLRDQ*LLWVHHSLCHW
Trigger: CCAATGGCACAGTGAATGATGAACCCACAACAGCCACTGATCCCGAAGAACCTTCCGTTGTTGGTGTGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356003.6
ENST00000359154.7
ENST00000544162.5
ENST00000563618.5
ENST00000569174.5
ENST00000570104.1
CDS CCA 72 bp TCTTGGTATTGTGGTCAACATAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCCATAAGGCTGTCGTCC +
Preference number: 6 (lower is better)
Translates to: SWYCGQHNRHVR*AALAVPIRLSS
Trigger: GGACGACAGCCTTATGGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATTATGTTGACCACAATACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567579.5
CDS CCA 72 bp TGGCTTCCACATTTGAGCGCTTTGCAGGGAATGCAGTaGGACTTTAGGTGGCATCTGCTCCTCTCAAAAGTC +
Preference number: 6 (lower is better)
Translates to: WLPHLSALQGMQ*DFRWHLLLSKV
Trigger: GACTTTTGAGAGGAGCAGATGCCACCTAAAGTCCCACTGCATTCCCTGCAAAGCGCTCAAATGTGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568185.1
ENST00000568684.1
CDS CAA 72 bp CTTGATGCCACTTCAAAGAAATTCCACGCTGCAGGCTaGAAGTCTCCCACATGGCGAAAAAGCACAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LDATSKKFHAAG*KSPTWRKSTAG
Trigger: CCCAGCTGTGCTTTTTCGCCATGTGGGAGACTTCAAGCCTGCAGCGTGGAATTTCTTTGAAGTGGCATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS TCA 72 bp TTGATGCCACTTCAAAGAAATTCCACGCTGCAGGCTTaGAGTCTCCCACATGGCGAAAAAGCACAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LMPLQRNSTLQA*SLPHGEKAQLG
Trigger: TCCCAGCTGTGCTTTTTCGCCATGTGGGAGACTTCAAGCCTGCAGCGTGGAATTTCTTTGAAGTGGCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS GCA 72 bp CACAGGCCACAGAGATCCTTTCGGCCCGGAGAAAGATaGAGATGTCTCAGCTTGATGCCACTTCAAAGAAAT +
Preference number: 6 (lower is better)
Translates to: HRPQRSFRPGER*RCLSLMPLQRN
Trigger: ATTTCTTTGAAGTGGCATCAAGCTGAGACATCTGCATCTTTCTCCGGGCCGAAAGGATCTCTGTGGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567161.1
CDS TCA 72 bp TTTTGCCCCCATTGTTCTTCAAGACGTTGGAGAGGTTaGCAGATGCGGTGCCTAGCAGTTCATTTCTCAAGG +
Preference number: 6 (lower is better)
Translates to: FCPHCSSRRWRG*QMRCLAVHFSR
Trigger: CCTTGAGAAATGAACTGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAATGGGGGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359154.7
ENST00000544162.5
ENST00000567986.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS TCA 72 bp CTTCCCTGCCATGGATCTCTCCAATTCTTTTCTGAGTaGGTCTGCTGCTATTTTCAGCCAGTTCCACTGAGG +
Preference number: 6 (lower is better)
Translates to: LPCHGSLQFFSE*VCCYFQPVPLR
Trigger: CCTCAGTGGAACTGGCTGAAAATAGCAGCAGACTCACTCAGAAAAGAATTGGAGAGATCCATGGCAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356003.6
ENST00000563618.5
CDS CCA 72 bp TCTTGGTATTGTGGTCAACATAATAGACACGTCCGTTaGGCAGCTCTCGCTGTTCCCATCTCAGAAACGTGT +
Preference number: 6 (lower is better)
Translates to: SWYCGQHNRHVR*AALAVPISETC
Trigger: ACACGTTTCTGAGATGGGAACAGCGAGAGCTGCCCAACGGACGTGTCTATTATGTTGACCACAATACCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569297.5
CDS CAA 72 bp CTTTTGCCCCCATTGTTCTTCAAGACGTTGGAGAGGTaGACAGATGCGGTGCCTAGCAGTTCATTTCTCAAG +
Preference number: 6 (lower is better)
Translates to: LLPPLFFKTLER*TDAVPSSSFLK
Trigger: CTTGAGAAATGAACTGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAATGGGGGCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569620.5
ENST00000569658.1
CDS CAA 72 bp AAAAATGCCAATGACTGGCTTCCACATTTGAGCGCTTaGCAGGGAATGCAGTGGGACTTTAGGTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: KNANDWLPHLSA*QGMQWDFRWHL
Trigger: CAGATGCCACCTAAAGTCCCACTGCATTCCCTGCAAAGCGCTCAAATGTGGAAGCCAGTCATTGGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568185.1
ENST00000568684.1
CDS CAA 72 bp TCATACGTACTTTTGCCCCCATTGTTCTTCAAGACGTaGGAGAGGTTGACAGATGCGGTGCCTAGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: SYVLLPPLFFKT*ERLTDAVPSSS
Trigger: TGAACTGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAATGGGGGCAAAAGTACGTATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569658.1
CDS CAA 90 bp TCATACGTACTTTTGCCCCCATTGTTCTTCAAGACGTTGGAGAGGTaGACAGATGCGGTGCCTAGCAGTTCATTTCTCAAGGTATGGCAG +
Preference number: 6 (lower is better)
Translates to: SYVLLPPLFFKTLER*TDAVPSSSFLKVWQ
Trigger: CTGCCATACCTTGAGAAATGAACTGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAATGGGGGCAAAAGTACGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569658.1
CDS TCA 72 bp CTCAAGGTATGGCAGCTCCAGACCTTTAAATCTAAATaGCTCTGTGCCGTGACATTCCTTGGGTACCATAGG +
Preference number: 6 (lower is better)
Translates to: LKVWQLQTFKSK*LCAVTFLGYHR
Trigger: CCTATGGTACCCAAGGAATGTCACGGCACAGAGTCATTTAGATTTAAAGGTCTGGAGCTGCCATACCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544162.5
CDS CAA 72 bp ATTTTGCCCCCATTGTTCTTCAAGACGTTGGAGAGGTaGACAGATGCGGTGCCTAGCAGTTCATTTCTCAAG +
Preference number: 6 (lower is better)
Translates to: ILPPLFFKTLER*TDAVPSSSFLK
Trigger: CTTGAGAAATGAACTGCTAGGCACCGCATCTGTCAACCTCTCCAACGTCTTGAAGAACAATGGGGGCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359154.7
ENST00000544162.5
ENST00000567986.5
ENST00000569174.5
CDS CAA 90 bp CATCAGTCAATCATACCCCTTTTGTCCAATCGTATTTCTCCACGATaGTCCACTCTTCATCAAACCAAGTTGTCCAGACTGGTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: HQSIIPLLSNRISPR*STLHQTKLSRLVLN
Trigger: GTTCAAGACCAGTCTGGACAACTTGGTTTGATGAAGAGTGGACAATCGTGGAGAAATACGATTGGACAAAAGGGGTATGATTGACTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563659.5
CDS CAA 90 bp CAGCCCTCTTTAGCCTTTCTGTTTCATCAGTCAATCATACCCCTTTaGTCCAATCGTATTTCTCCACGATTGTCCACTCTTCATCAAACC +
Preference number: 6 (lower is better)
Translates to: QPSLAFLFHQSIIPL*SNRISPRLSTLHQT
Trigger: GGTTTGATGAAGAGTGGACAATCGTGGAGAAATACGATTGGACAAAAGGGGTATGATTGACTGATGAAACAGAAAGGCTAAAGAGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563659.5
CDS CAA 72 bp ATCATACCCCTTTTGTCCAATCGTATTTCTCCACGATaGTCCACTCTTCATCAAACCAAGTTGTCCAGACTG +
Preference number: 6 (lower is better)
Translates to: IIPLLSNRISPR*STLHQTKLSRL
Trigger: CAGTCTGGACAACTTGGTTTGATGAAGAGTGGACAATCGTGGAGAAATACGATTGGACAAAAGGGGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563659.5
CDS TCA 72 bp CTCAAGGTATGGCAGCTCCAGACCTTTAAATCTAAATaGCTCTGTGCCGTGACATTCAAAATGATGATCTCA +
Preference number: 6 (lower is better)
Translates to: LKVWQLQTFKSK*LCAVTFKMMIS
Trigger: TGAGATCATCATTTTGAATGTCACGGCACAGAGTCATTTAGATTTAAAGGTCTGGAGCTGCCATACCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359154.7
ENST00000561780.5
ENST00000569174.5
ENST00000569620.5
ENST00000569658.1
CDS TCA 72 bp CTCAAGGTATGGCAGCTCCAGACCTTTAAATCTAAATaGCTCTGTGCCGTGACATTCCTGAAAAACAAATAC +
Preference number: 6 (lower is better)
Translates to: LKVWQLQTFKSK*LCAVTFLKNKY
Trigger: GTATTTGTTTTTCAGGAATGTCACGGCACAGAGTCATTTAGATTTAAAGGTCTGGAGCTGCCATACCTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567986.5
CDS CAA 72 bp TTAGCCTTTCTGTTTCATCAGTCAATCATACCCCTTTaGTCCAATCGTATTTCTCCACGATTGTCCACTCTT +
Preference number: 6 (lower is better)
Translates to: LAFLFHQSIIPL*SNRISPRLSTL
Trigger: AAGAGTGGACAATCGTGGAGAAATACGATTGGACAAAAGGGGTATGATTGACTGATGAAACAGAAAGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563659.5