Pregenerated sensors for WWP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000123124Ensembl transcript IDs: ENST00000517970.6, ENST00000520521.1, ENST00000523863.5, ENST00000524036.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 72 bp | AGGCTTGAAAATTACCAGAGTGTTCATAATAAGGATTaGGAAAAGGAGTCTATTCAACCAAGCAGATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RLENYQSVHNKD*EKESIQPSRSL Trigger: CAGAGATCTGCTTGGTTGAATAGACTCCTTTTCCAAATCCTTATTATGAACACTCTGGTAATTTTCAAGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517970.6 |
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| CDS TCA 90 bp | GAACTCCACTGCCCAATTCTTTGGCCCTCTATCCAAGTTCTTCTATaGTCTGGCTCTCCATTTAAGTTACCTGCTAGTTTCGATGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ELHCPILWPSIQVLL*SGSPFKLPASFDVA Trigger: GGCCACATCGAAACTAGCAGGTAACTTAAATGGAGAGCCAGATCATAGAAGAACTTGGATAGAGGGCCAAAGAATTGGGCAGTGGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS GCA 90 bp | ATGTGGCCAAACTACAAATTCACTGATCCTCATATAGATATAACATaGTTATTTGTATGCCACACTTTTGCTTGGGTATGTCTCCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: MWPNYKFTDPHIDIT*LFVCHTFAWVCLLN Trigger: GTTGAGGAGACATACCCAAGCAAAAGTGTGGCATACAAATAAGCATGTTATATCTATATGAGGATCAGTGAATTTGTAGTTTGGCCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS CCA 90 bp | TTCTATGATCTGGCTCTCCATTTAAGTTACCTGCTAGTTTCGATGTaGCCAAACTACAAATTCACTGATCCTCATATAGATATAACATGC | + |
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Preference number: 5 (lower is better) Translates to: FYDLALHLSYLLVSM*PNYKFTDPHIDITC Trigger: GCATGTTATATCTATATGAGGATCAGTGAATTTGTAGTTTGGCCACATCGAAACTAGCAGGTAACTTAAATGGAGAGCCAGATCATAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS GCA 90 bp | AGAAATTCACAATGTAAGCTGCTTCTGCCTGAAGAAGAAAATTGTTaGAGAGATCCAGCAATAAGAATTAGATCATTGGGAAGAAAACTC | + |
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Preference number: 5 (lower is better) Translates to: RNSQCKLLLPEEENC*RDPAIRIRSLGRKL Trigger: GAGTTTTCTTCCCAATGATCTAATTCTTATTGCTGGATCTCTGCAACAATTTTCTTCTTCAGGCAGAAGCAGCTTACATTGTGAATTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520521.1 |
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| CDS GCA 90 bp | TACAAATTCACTGATCCTCATATAGATATAACATGCTTATTTGTATaGCACACTTTTGCTTGGGTATGTCTCCTCAACTTCAATTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YKFTDPHIDITCLFV*HTFAWVCLLNFNSA Trigger: AGCTGAATTGAAGTTGAGGAGACATACCCAAGCAAAAGTGTGGCATACAAATAAGCATGTTATATCTATATGAGGATCAGTGAATTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS TCA 72 bp | AGACACGATTCCCTCTTTCAAGGAGCTCATAGTCTGTaGGGAGACAACCCCGGCGCGAAGCTGTCGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RHDSLFQGAHSL*GDNPGAKLSAP Trigger: GGGAGCCGACAGCTTCGCGCCGGGGTTGTCTCCTCACAGACTATGAGCTCCTTGAAAGAGGGAATCGTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517970.6 ENST00000523863.5 |
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| CDS CAA 72 bp | GACTTGAGTGAGTGGGTGTGCCCTTTTCTGTCCCTTTaGCCATGTGAGGACAGTGTTCATCCCCTTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DLSEWVCPFLSL*PCEDSVHPLQR Trigger: CCTCTGAAGGGGATGAACACTGTCCTCACATGGCAAAAGGGACAGAAAAGGGCACACCCACTCACTCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523863.5 |
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| CDS CCA 72 bp | GATGCAGCAACAAGGTGCCATCTTGGAAACAGGAACTaGATCCTCTCCAAACTCGAACCTGCTGGCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: DAATRCHLGNRN*ILSKLEPAGIL Trigger: CAAGATGCCAGCAGGTTCGAGTTTGGAGAGGATCCAGTTCCTGTTTCCAAGATGGCACCTTGTTGCTGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523863.5 |
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| CDS CAA 72 bp | GCTCAACAGTCTTTAAGAACTCCACTGCCCAATTCTTaGGCCCTCTATCCAAGTTCTTCTATGATCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AQQSLRTPLPNS*ALYPSSSMIWL Trigger: GAGCCAGATCATAGAAGAACTTGGATAGAGGGCCAAAGAATTGGGCAGTGGAGTTCTTAAAGACTGTTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS CAA 90 bp | AGGAACTGGATCCTCTCCAAACTCGAACCTGCTGGCATCTTGATCTaGGACTTCCAGATCCTAGAAATTTTCTATTGTGTATCAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: RNWILSKLEPAGILI*DFQILEIFYCVSTE Trigger: CTCTGTTGATACACAATAGAAAATTTCTAGGATCTGGAAGTCCAAGATCAAGATGCCAGCAGGTTCGAGTTTGGAGAGGATCCAGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523863.5 |
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| CDS TCA 72 bp | TGCCCAATTCTTTGGCCCTCTATCCAAGTTCTTCTATaGTCTGGCTCTCCATTTAAGTTACCTGCTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: CPILWPSIQVLL*SGSPFKLPASF Trigger: GAAACTAGCAGGTAACTTAAATGGAGAGCCAGATCATAGAAGAACTTGGATAGAGGGCCAAAGAATTGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS CAA 72 bp | AACTGGATCCTCTCCAAACTCGAACCTGCTGGCATCTaGATCTTGGACTTCCAGATCCTAGAAATTTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: NWILSKLEPAGI*ILDFQILEIFY Trigger: ATAGAAAATTTCTAGGATCTGGAAGTCCAAGATCAAGATGCCAGCAGGTTCGAGTTTGGAGAGGATCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523863.5 |
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| CDS CAA 72 bp | ATCCTCTCCAAACTCGAACCTGCTGGCATCTTGATCTaGGACTTCCAGATCCTAGAAATTTTCTATTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: ILSKLEPAGILI*DFQILEIFYCV Trigger: TACACAATAGAAAATTTCTAGGATCTGGAAGTCCAAGATCAAGATGCCAGCAGGTTCGAGTTTGGAGAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523863.5 |
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| CDS CAA 90 bp | GAAGAAGAAAATTGTTGCAGAGATCCAGCAATAAGAATTAGATCATaGGGAAGAAAACTCTCTCTACAGAATGTCGCTCCCTTCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: EEENCCRDPAIRIRS*GRKLSLQNVAPFTV Trigger: GACTGTGAAGGGAGCGACATTCTGTAGAGAGAGTTTTCTTCCCAATGATCTAATTCTTATTGCTGGATCTCTGCAACAATTTTCTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520521.1 |
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| CDS CCA 72 bp | CTGGCTCTCCATTTAAGTTACCTGCTAGTTTCGATGTaGCCAAACTACAAATTCACTGATCCTCATATAGAT | + |
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Preference number: 6 (lower is better) Translates to: LALHLSYLLVSM*PNYKFTDPHID Trigger: ATCTATATGAGGATCAGTGAATTTGTAGTTTGGCCACATCGAAACTAGCAGGTAACTTAAATGGAGAGCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS CAA 72 bp | AATTGTTGCAGAGATCCAGCAATAAGAATTAGATCATaGGGAAGAAAACTCTCTCTACAGAATGTCGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: NCCRDPAIRIRS*GRKLSLQNVAP Trigger: GGGAGCGACATTCTGTAGAGAGAGTTTTCTTCCCAATGATCTAATTCTTATTGCTGGATCTCTGCAACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520521.1 |
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| CDS CAA 90 bp | TCCTCATATAGATATAACATGCTTATTTGTATGCCACACTTTTGCTaGGGTATGTCTCCTCAACTTCAATTCAGCTTAAATCCCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSYRYNMLICMPHFC*GMSPQLQFSLNPIS Trigger: TGAAATGGGATTTAAGCTGAATTGAAGTTGAGGAGACATACCCAAGCAAAAGTGTGGCATACAAATAAGCATGTTATATCTATATGAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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| CDS GCA 72 bp | CAGATCTTAAATATATTCATATATACATCATACCTCTaGTCAACAGTCTTTAAGAACTCCACTGCCCAATTC | + |
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Preference number: 6 (lower is better) Translates to: QILNIFIYTSYL*STVFKNSTAQF Trigger: GAATTGGGCAGTGGAGTTCTTAAAGACTGTTGAGCAGAGGTATGATGTATATATGAATATATTTAAGATCTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524036.1 |
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