RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WWC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113645

Ensembl transcript IDs: ENST00000265293.9, ENST00000393895.7, ENST00000517425.5, ENST00000517646.1, ENST00000518204.1, ENST00000518334.1, ENST00000519659.5, ENST00000519859.1, ENST00000521089.5, ENST00000521391.1, ENST00000522140.1, ENST00000523043.5, ENST00000524038.5, ENST00000524093.5, ENST00000524228.5, ENST00000624315.1

Found 743 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGCATCTGAGACCAGCGTGGCCTGTCACCCACATAGACTAGGCTaGTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGC +
Preference number: 1 (lower is better)
Translates to: WASETSVACHPHRLG*LAHPAYHTARSTLG
Trigger: GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCTATGTGGGTGACAGGCCACGCTGGTCTCAGATGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR TCA 90 bp ACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGGTATGAGGGGCTaGCCCTTGCTGGGACAACTGAGCACAGATGAATGTGTCACTGAG +
Preference number: 1 (lower is better)
Translates to: TALLHSSGCCRGMRG*PLLGQLSTDECVTE
Trigger: CTCAGTGACACATTCATCTGTGCTCAGTTGTCCCAGCAAGGGTCAGCCCCTCATACCCCTGCAGCATCCGCTGCTATGAAGCAGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 90 bp CTTCCGCAGAGGTGGTCTGGTTCTCCCCACAAATGCCCCGACAGCTaGAGTGATGCTGAGATGCACTTCTTCAGGCAGGAGGATTTGCTC +
Preference number: 1 (lower is better)
Translates to: LPQRWSGSPHKCPDS*SDAEMHFFRQEDLL
Trigger: GAGCAAATCCTCCTGCCTGAAGAAGTGCATCTCAGCATCACTTCAGCTGTCGGGGCATTTGTGGGGAGAACCAGACCACCTCTGCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 90 bp ATGGGAGCCAAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTaGCCCGTTGCTGTGGCCAATGCCCTTAACAGAAGGGCAGAAAAG +
Preference number: 1 (lower is better)
Translates to: MGAKGMGHLQPAWGI*PVAVANALNRRAEK
Trigger: CTTTTCTGCCCTTCTGTTAAGGGCATTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTTGGCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 90 bp GTGTGCATAAGACTTACAGAGGGAACATGGGTAAAACACTGGCACTaGGGACCGTCCCAGGGTGGGCGGGATAGTTCAGTGGGTCTAGAG +
Preference number: 1 (lower is better)
Translates to: VCIRLTEGTWVKHWH*GPSQGGRDSSVGLE
Trigger: CTCTAGACCCACTGAACTATCCCGCCCACCCTGGGACGGTCCCCAGTGCCAGTGTTTTACCCATGTTCCCTCTGTAAGTCTTATGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 90 bp ATTGCGGTGTGCATAAGACTTACAGAGGGAACATGGGTAAAACACTaGCACTGGGGACCGTCCCAGGGTGGGCGGGATAGTTCAGTGGGT +
Preference number: 1 (lower is better)
Translates to: IAVCIRLTEGTWVKH*HWGPSQGGRDSSVG
Trigger: ACCCACTGAACTATCCCGCCCACCCTGGGACGGTCCCCAGTGCCAGTGTTTTACCCATGTTCCCTCTGTAAGTCTTATGCACACCGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 90 bp GGTCTAATCATGGGAGCCAAAGGGATGGGTCACTTACAGCCAGCTTaGGGCATTTGCCCCGTTGCTGTGGCCAATGCCCTTAACAGAAGG +
Preference number: 1 (lower is better)
Translates to: GLIMGAKGMGHLQPA*GICPVAVANALNRR
Trigger: CCTTCTGTTAAGGGCATTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTTGGCTCCCATGATTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 90 bp CAAAGAGAGCAGCCTCCTCAAAGCTCAGAGGAGTGTAGGCACAGGTaGCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACCTAGT +
Preference number: 1 (lower is better)
Translates to: QREQPPQSSEECRHR*HRAARDHPCALQPS
Trigger: ACTAGGTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGGAGGCTGCTCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 90 bp CAAGCTGTAGCACCTACCAGCCCCTGGGTTGGGGACGACATGGGATaGTGCTCATATGAACAAACTGTGAAGTCATCTCTCTCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: QAVAPTSPWVGDDMG*CSYEQTVKSSLSGW
Trigger: CCACCCAGAGAGAGATGACTTCACAGTTTGTTCATATGAGCATCATCCCATGTCGTCCCCAACCCAGGGGCTGGTAGGTGCTACAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 90 bp GAAGGCCATGAATTTCAGCGTTCCCTGTGTGACTCACCAATAGGATaGGGGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCAC +
Preference number: 1 (lower is better)
Translates to: EGHEFQRSLCDSPIG*GPHHFACLCLGFTH
Trigger: GTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCCCGCATCCTATTGGTGAGTCACACAGGGAACGCTGAAATTCATGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 90 bp TGTGACTCACCAATAGGATGCGGGCCTCACCATTTTGCCTGTCTCTaGCTGGGTTTCACTCACTTTATACCAGTGGGGCTCTCAAATTGC +
Preference number: 1 (lower is better)
Translates to: CDSPIGCGPHHFACL*LGFTHFIPVGLSNC
Trigger: GCAATTTGAGAGCCCCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCCCGCATCCTATTGGTGAGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 90 bp TGGGTTTCACTCACTTTATACCAGTGGGGCTCTCAAATTGCGGTGTaGATAAGACTTACAGAGGGAACATGGGTAAAACACTGGCACTGG +
Preference number: 1 (lower is better)
Translates to: WVSLTLYQWGSQIAV*IRLTEGTWVKHWHW
Trigger: CCAGTGCCAGTGTTTTACCCATGTTCCCTCTGTAAGTCTTATGCACACCGCAATTTGAGAGCCCCACTGGTATAAAGTGAGTGAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 90 bp CTCTGCCTGGGTTTCACTCACTTTATACCAGTGGGGCTCTCAAATTaGGGTGTGCATAAGACTTACAGAGGGAACATGGGTAAAACACTG +
Preference number: 1 (lower is better)
Translates to: LCLGFTHFIPVGLSN*GVHKTYRGNMGKTL
Trigger: CAGTGTTTTACCCATGTTCCCTCTGTAAGTCTTATGCACACCGCAATTTGAGAGCCCCACTGGTATAAAGTGAGTGAAACCCAGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 90 bp ACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTaGGGCTCTCAAATTGCGGTGTGCATAAGACTTACAGAGGGAACA +
Preference number: 1 (lower is better)
Translates to: TILPVSAWVSLTLYQ*GSQIAVCIRLTEGT
Trigger: TGTTCCCTCTGTAAGTCTTATGCACACCGCAATTTGAGAGCCCCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 90 bp GAGGAAGGAGGAAGAGATTTGTGGCTGTTGCTATTTGTTAGAAACTaGCTTCTGATTGTCTGCAGTAGACCCTGCAAAGCTCTGAGCTGG +
Preference number: 1 (lower is better)
Translates to: EEGGRDLWLLLFVRN*LLIVCSRPCKALSW
Trigger: CCAGCTCAGAGCTTTGCAGGGTCTACTGCAGACAATCAGAAGTCAGTTTCTAACAAATAGCAACAGCCACAAATCTCTTCCTCCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 90 bp GATATAGCTGGTGCAACTTGCTTTGCTGAGTGGTGCAACAGACTTTaGGAAAAGTTGCACAGGGTAATGTCAGAGAGGAAGGAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: DIAGATCFAEWCNRL*EKLHRVMSERKEEE
Trigger: CTCTTCCTCCTTCCTCTCTGACATTACCCTGTGCAACTTTTCTCAAAGTCTGTTGCACCACTCAGCAAAGCAAGTTGCACCAGCTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 90 bp AAGGTGTTGATTGATACTCATATGAAGACATTACGAAGTAAACCCTaGATGTGTCTGGTGGAATTCAATGGAAGGAGAGAGAACATCAGA +
Preference number: 1 (lower is better)
Translates to: KVLIDTHMKTLRSKP*MCLVEFNGRRENIR
Trigger: TCTGATGTTCTCTCTCCTTCCATTGAATTCCACCAGACACATTCAGGGTTTACTTCGTAATGTCTTCATATGAGTATCAATCAACACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAGCAACCTCCGCCTCCTaGGTTCAAGCCTTGGCCACC +
Preference number: 2 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQATSAS*VQALAT
Trigger: GGTGGCCAAGGCTTGAACCCAGGAGGCGGAGGTTGC...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAAGCCTCAGCAGCAAGTaGAGGTGGCACCACTCCCTC +
Preference number: 2 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQSLSSK*RWHHSL
Trigger: GAGGGAGTGGTGCCACCTTCACTTGCTGCTGAGGCT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCCTCCATCACCGCCCATaGGTTCCCAGTAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: KGMGHLQPAWGICPVAVALHHRP*VPSSLE
Trigger: CTCCAGGCTACTGGGAACCCATGGGCGGTGATGGAG...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAATGTGTTCAGAGACGTaGAGCCACGGGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQMCSET*SHGAGG
Trigger: TCCTCCTGCCCCGTGGCTTCACGTCTCTGAACACAT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR GCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCATAGCTGGTGCAACTTaGTTTGCTGAGTGGTGCAAC +
Preference number: 2 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGIAGAT*FAEWCN
Trigger: GTTGCACCACTCAGCAAAGCAAGTTGCACCAGCTAT...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGCACCTACCAGCCCCTaGGTTGGGGACGACATGGGA +
Preference number: 2 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRAPTSP*VGDDMG
Trigger: TCCCATGTCGTCCCCAACCCAGGGGCTGGTAGGTGC...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAAAATTAGCTGTACTGTaGCAAGTGCGGGACGTCCTA +
Preference number: 2 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPKLAVL*QVRDVL
Trigger: TAGGACGTCCCGCACTTGTCACAGTACAGCTAATTT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAAATTAGCTGTACTGTaGCAAGTGCGGGACGTCCTA +
Preference number: 2 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSKLAVL*QVRDVL
Trigger: TAGGACGTCCCGCACTTGTCACAGTACAGCTAATTT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTaGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTG +
Preference number: 2 (lower is better)
Translates to: LGCLAHPAYHTARST*GSHIKTRHSSRRSV
Trigger: CACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAAATTAGCTGTACTGTaGCAAGTGCGGGACGTCCTA +
Preference number: 2 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGKLAVL*QVRDVL
Trigger: TAGGACGTCCCGCACTTGTCACAGTACAGCTAATTT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR-3UTR TCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCATGGGTGGGAAAGAAATaGCTGGAAAGGGGAGAGTCA +
Preference number: 2 (lower is better)
Translates to: SAASEGGTTPSITAHGFPWVGKK*LERGES
Trigger: TGACTCTCCCCTTTCCAGTCATTTCTTTCCCACCCA...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCATCTGAGACCAGCGTaGCCTGTCACCCACATAGAC +
Preference number: 2 (lower is better)
Translates to: PQSSEECRHRCHRAARDHHLRPA*PVTHID
Trigger: GTCTATGTGGGTGACAGGCCACGCTGGTCTCAGATG...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR GCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGAGTGTAGGCACAGGTaGCACAGAGCAGCACGAGAC +
Preference number: 2 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAECRHR*HRAARD
Trigger: GTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCACTCACTTTATACCAGTaGGGCTCTCAAATTGCGGTG +
Preference number: 2 (lower is better)
Translates to: SAASEGGTTPSITAHGFPLTLYQ*GSQIAV
Trigger: CACCGCAATTTGAGAGCCCCACTGGTATAAAGTGAG...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAATTAGCTGTACTGTaGCAAGTGCGGGACGTCCTA +
Preference number: 2 (lower is better)
Translates to: KGMGHLQPAWGICPVAVAKLAVL*QVRDVL
Trigger: TAGGACGTCCCGCACTTGTCACAGTACAGCTAATTT...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAACATGGGTAAAACACTaGCACTGGGGACCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SYTQGGRLQLCFIAADAATWVKH*HWGPSQ
Trigger: CTGGGACGGTCCCCAGTGCCAGTGTTTTACCCATGT...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCATTAGAAACTGACTTCTaGTTGTCTGCAGTAGACCCT +
Preference number: 2 (lower is better)
Translates to: SAASEGGTTPSITAHGFPLETDF*LSAVDP
Trigger: AGGGTCTACTGCAGACAATCAGAAGTCAGTTTCTAA...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR GCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCACCACATAGACTAGGCTaGTTAGCCCACCCAGCCTAT +
Preference number: 2 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAPHRLG*LAHPAY
Trigger: ATAGGCTGGGTGGGCTAAGCAGCCTAGTCTATGTGG...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAAGACCTCTAAAAGGTaGAGCTGTACAAACCAAAAA +
Preference number: 2 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSKTSKR*SCTNQK
Trigger: TTTTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR-3UTR CCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAATGAAGCTGGAACCATaGCCAGAGGTAGCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAMKLEP*PEVALG
Trigger: TCCCAAGGCTACCTCTGGCCATGGTTCCAGCTTCAT...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAGGTCTAGAGAGGACCTaGCAGTCTGCATTTTATTTT +
Preference number: 2 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQGLERT*QSAFYF
Trigger: AAAATAAAATGCAGACTGTCAGGTCCTCTCTAGACC...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR GCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGTGGGGCTCTCAAATTaGGGTGTGCATAAGACTTAC +
Preference number: 2 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRVGLSN*GVHKTY
Trigger: GTAAGTCTTATGCACACCGCAATTTGAGAGCCCCAC...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGCTTACAGAGGGAACATaGGTAAAACACTGGCACTGG +
Preference number: 2 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRLTEGT*VKHWHW
Trigger: CCAGTGCCAGTGTTTTACCCATGTTCCCTCTGTAAG...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCGGGGAAGGTGTTGATTaGTACTCATATGAAGACATT +
Preference number: 2 (lower is better)
Translates to: KGMGHLQPAWGICPVAVAGEGVD*YSYEDI
Trigger: AATGTCTTCATATGAGTATCAATCAACACCTTCCCC...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACTTGCCTGTCTCTGCCTaGGTTTCACTCACTTTATAC +
Preference number: 2 (lower is better)
Translates to: SVGTGATEQHETILVLYNLPVSA*VSLTLY
Trigger: GTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAA...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACTTACGAAGTAAACCCTaGATGTGTCTGGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: SVGTGATEQHETILVLYNLRSKP*MCLVEF
Trigger: GAATTCCACCAGACACATTCAGGGTTTACTTCGTAA...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATGGAGGAAGAGATTTGTaGCTGTTGCTATTTGTTAGA +
Preference number: 2 (lower is better)
Translates to: PQSSEECRHRCHRAARDHGGRDL*LLLFVR
Trigger: TCTAACAAATAGCAACAGCCACAAATCTCTTCCTCC...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGTGGTGCAACAGACTTTaGGAAAAGTTGCACAGGGTA +
Preference number: 2 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWWCNRL*EKLHRV
Trigger: TACCCTGTGCAACTTTTCTCAAAGTCTGTTGCACCA...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR GCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATGAGATTTGTGGCTGTTaGTATTTGTTAGAAACTGAC +
Preference number: 2 (lower is better)
Translates to: PQSSEECRHRCHRAARDHEICGC*YLLETD
Trigger: GTCAGTTTCTAACAAATAGCAACAGCCACAAATCTC...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGAAGACCTCTAAAAGGTaGAGCTGTACAAACCAAAAA +
Preference number: 2 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRKTSKR*SCTNQK
Trigger: TTTTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTT...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCATGGGAAAGAAATGACTaGAAAGGGGAGAGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAWERND*KGESQK
Trigger: TTTTTGACTCTCCCCTTTCCAGTCATTTCTTTCCCA...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGGCTTCACTGGGCATCTaGGACCAGCGTGGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: THVTFKVFIESKWTADTVASLGI*DQRGLS
Trigger: TGACAGGCCACGCTGGTCTCAGATGCCCAGTGAAGC...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGGTAAAACACTGGCACTaGGGACCGTCCCAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: THVTFKVFIESKWTADTVVKHWH*GPSQGG
Trigger: CCCACCCTGGGACGGTCCCCAGTGCCAGTGTTTTAC...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCTATTTGTTAGAAACTaGCTTCTGATTGTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWLFVRN*LLIVCS
Trigger: ACTGCAGACAATCAGAAGTCAGTTTCTAACAAATAG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR TCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGGCCTGGAGAAGGCCATaGATTTCAGCGTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: THVTFKVFIESKWTADTVAWRRP*ISAFPV
Trigger: CACAGGGAACGCTGAAATTCATGGCCTTCTCCAGGC...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR GCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGCGGGCCTCACCATTTTaGCTGTCTCTGCCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: THVTFKVFIESKWTADTVRASPF*LSLPGF
Trigger: AAACCCAGGCAGAGACAGGCAAAATGGTGAGGCCCG...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CAA 90 bp GCAGCACGAGACCATCCTTGTGCTCTACAACCTAGTACAATTGAGTaGGGGAAGGTGTTGATTGATACTCATATGAAGACATTACGAAGT +
Preference number: 2 (lower is better)
Translates to: AARDHPCALQPSTIE*GKVLIDTHMKTLRS
Trigger: ACTTCGTAATGTCTTCATATGAGTATCAATCAACACCTTCCCCAACTCAATTGTACTAGGTTGTAGAGCACAAGGATGGTCTCGTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR GCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGTCTCAAATTGCGGTGTaGATAAGACTTACAGAGGGA +
Preference number: 2 (lower is better)
Translates to: THVTFKVFIESKWTADTVSQIAV*IRLTEG
Trigger: TCCCTCTGTAAGTCTTATGCACACCGCAATTTGAGA...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGAACCCTGAATGTGTCTaGTGGAATTCAATGGAAGGA +
Preference number: 2 (lower is better)
Translates to: THVTFKVFIESKWTADTVNPECV*WNSMEG
Trigger: TCCTTCCATTGAATTCCACCAGACACATTCAGGGTT...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 72 bp GAGACCAGCGTGGCCTGTCACCCACATAGACTAGGCTaGTTAGCCCACCCAGCCTATCACACTGCCCGCTCC +
Preference number: 3 (lower is better)
Translates to: ETSVACHPHRLG*LAHPAYHTARS
Trigger: GGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCTATGTGGGTGACAGGCCACGCTGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR-3UTR CAA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAACTGCCCGCTCCACGTaGGGCAGCCACATAAAAACA +
Preference number: 3 (lower is better)
Translates to: SAASEGGTTPSITAHGFPTARST*GSHIKT
Trigger: TGTTTTTATGTGGCTGCCCAACGTGGAGCGGGCAGT...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 72 bp ATGGGAGCCAAAGGGATGGGTCACTTACAGCCAGCTTaGGGCATTTGCCCCGTTGCTGTGGCCAATGCCCTT +
Preference number: 3 (lower is better)
Translates to: MGAKGMGHLQPA*GICPVAVANAL
Trigger: AAGGGCATTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTTGGCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 72 bp AGACTTACAGAGGGAACATGGGTAAAACACTGGCACTaGGGACCGTCCCAGGGTGGGCGGGATAGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: RLTEGTWVKHWH*GPSQGGRDSSV
Trigger: CACTGAACTATCCCGCCCACCCTGGGACGGTCCCCAGTGCCAGTGTTTTACCCATGTTCCCTCTGTAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp CTTCATAGCAGCGGATGCTGCAGGGGTATGAGGGGCTaGCCCTTGCTGGGACAACTGAGCACAGATGAATGT +
Preference number: 3 (lower is better)
Translates to: LHSSGCCRGMRG*PLLGQLSTDEC
Trigger: ACATTCATCTGTGCTCAGTTGTCCCAGCAAGGGTCAGCCCCTCATACCCCTGCAGCATCCGCTGCTATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp AGGTGGTCTGGTTCTCCCCACAAATGCCCCGACAGCTaGAGTGATGCTGAGATGCACTTCTTCAGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: RWSGSPHKCPDS*SDAEMHFFRQE
Trigger: CTCCTGCCTGAAGAAGTGCATCTCAGCATCACTTCAGCTGTCGGGGCATTTGTGGGGAGAACCAGACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 72 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTaGCCCGTTGCTGTGGCCAATGCCCTTAACAGAAGG +
Preference number: 3 (lower is better)
Translates to: KGMGHLQPAWGI*PVAVANALNRR
Trigger: CCTTCTGTTAAGGGCATTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 72 bp GAATTCAACTCCATCCATGGCTGGAAGAGGGTCTGCTaGCTTCCGCAGAGGTGGTCTGGTTCTCCCCACAAA +
Preference number: 3 (lower is better)
Translates to: EFNSIHGWKRVC*LPQRWSGSPHK
Trigger: TTTGTGGGGAGAACCAGACCACCTCTGCGGAAGGCAGCAGACCCTCTTCCAGCCATGGATGGAGTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp CCCCTGGGTTGGGGACGACATGGGATGATGCTCATATaGACAAACTGTGAAGTCATCTCTCTCTGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: PLGWGRHGMMLI*TNCEVISLWVG
Trigger: CCCCACCCAGAGAGAGATGACTTCACAGTTTGTTCATATGAGCATCATCCCATGTCGTCCCCAACCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 72 bp GAATTTCAGCGTTCCCTGTGTGACTCACCAATAGGATaGGGGCCTCACCATTTTGCCTGTCTCTGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: EFQRSLCDSPIG*GPHHFACLCLG
Trigger: ACCCAGGCAGAGACAGGCAAAATGGTGAGGCCCGCATCCTATTGGTGAGTCACACAGGGAACGCTGAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 72 bp GTTCTGAATGGCTCAGCTGGACCCCATGCCTCTCCTTaGTCTAATCATGGGAGCCAAAGGGATGGGTCACTT +
Preference number: 3 (lower is better)
Translates to: VLNGSAGPHASP*SNHGSQRDGSL
Trigger: AAGTGACCCATCCCTTTGGCTCCCATGATTAGACCAAGGAGAGGCATGGGGTCCAGCTGAGCCATTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp GCACCTACCAGCCCCTGGGTTGGGGACGACATGGGATaGTGCTCATATGAACAAACTGTGAAGTCATCTCTC +
Preference number: 3 (lower is better)
Translates to: APTSPWVGDDMG*CSYEQTVKSSL
Trigger: GAGAGATGACTTCACAGTTTGTTCATATGAGCATCATCCCATGTCGTCCCCAACCCAGGGGCTGGTAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 72 bp TTTCCTAATCCCATTGCCCCCATGAAGCTGGAACCATaGCCAGAGGTAGCCTTGGGAAGAGAAAATCTCATC +
Preference number: 3 (lower is better)
Translates to: FPNPIAPMKLEP*PEVALGRENLI
Trigger: GATGAGATTTTCTCTTCCCAAGGCTACCTCTGGCCATGGTTCCAGCTTCATGGGGGCAATGGGATTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 72 bp CCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTaGGGCTCTCAAATTGCGGTGTGCATAAGACTTACA +
Preference number: 3 (lower is better)
Translates to: PVSAWVSLTLYQ*GSQIAVCIRLT
Trigger: TGTAAGTCTTATGCACACCGCAATTTGAGAGCCCCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CAA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGCTACCAGCCCCTGGGTaGGGGACGACATGGGATGAT +
Preference number: 3 (lower is better)
Translates to: THVTFKVFIESKWTADTVLPAPG*GTTWDD
Trigger: ATCATCCCATGTCGTCCCCAACCCAGGGGCTGGTAG...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp GGTGCAACTTGCTTTGCTGAGTGGTGCAACAGACTTTaGGAAAAGTTGCACAGGGTAATGTCAGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: GATCFAEWCNRL*EKLHRVMSERK
Trigger: CTTCCTCTCTGACATTACCCTGTGCAACTTTTCTCAAAGTCTGTTGCACCACTCAGCAAAGCAAGTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR GCA 72 bp GGTTTCACTCACTTTATACCAGTGGGGCTCTCAAATTaGGGTGTGCATAAGACTTACAGAGGGAACATGGGT +
Preference number: 3 (lower is better)
Translates to: GFTHFIPVGLSN*GVHKTYRGNMG
Trigger: ACCCATGTTCCCTCTGTAAGTCTTATGCACACCGCAATTTGAGAGCCCCACTGGTATAAAGTGAGTGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp CTAGGCAAACAATGGAATGTATTGGTGGTTTGCTGGTaGACCGTTTATAGAGAATTCAACTCCATCCATGGC +
Preference number: 3 (lower is better)
Translates to: LGKQWNVLVVCW*TVYREFNSIHG
Trigger: GCCATGGATGGAGTTGAATTCTCTATAAACGGTTCACCAGCAAACCACCAATACATTCCATTGTTTGCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR-3UTR CAA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGTATCCCCAGTCTAACTaGGGGATGTGGATTCCCAAT +
Preference number: 3 (lower is better)
Translates to: THVTFKVFIESKWTADTVYPQSN*GMWIPN
Trigger: ATTGGGAATCCACATCCCCAAGTTAGACTGGGGATA...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CCA 72 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATaGACTGCAGATACAGTGAGGATGCTGCTGCCTTTT +
Preference number: 3 (lower is better)
Translates to: THVTFKVFIESK*TADTVRMLLPF
Trigger: AAAAGGCAGCAGCATCCTCACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp GGTGGGCGGGATAGTTCAGTGGGTCTAGAGAGGACCTaGCAGTCTGCATTTTATTTTTATTATTATTATTTT +
Preference number: 3 (lower is better)
Translates to: GGRDSSVGLERT*QSAFYFYYYYF
Trigger: AAAATAATAATAATAAAAATAAAATGCAGACTGTCAGGTCCTCTCTAGACCCACTGAACTATCCCGCCCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp ATTGATACTCATATGAAGACATTACGAAGTAAACCCTaGATGTGTCTGGTGGAATTCAATGGAAGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: IDTHMKTLRSKP*MCLVEFNGRRE
Trigger: CTCTCTCCTTCCATTGAATTCCACCAGACACATTCAGGGTTTACTTCGTAATGTCTTCATATGAGTATCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR TCA 72 bp GAATTCCATAACACATGTGACTTTCAAAGTTTTTATTaGGTCCAAATGGACTGCAGATACAGTGAGGATGCT +
Preference number: 3 (lower is better)
Translates to: EFHNTCDFQSFY*VQMDCRYSEDA
Trigger: AGCATCCTCACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGTTATGGAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCTCTCACGCTGCCATGTaGGTCCGCAGCGGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGSHAAM*VRSGAV
Trigger: CACCGCGCCGCTGCGGACGCACATGGCAGCGTGAGA...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGCCGGCCTCTCACGCTaGCATGTGCGTCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSAGLSR*HVRPQR
Trigger: CCGCTGCGGACGCACATGGCAGCGTGAGAGGCCGGC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCACGCCTCCCTCCTCCCTaGAGCCGGGTGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPRLPPP*SRVPSL
Trigger: GAGGGACGGCACCCGGCTGCAGGGAGGAGGGAGGCG...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAGGTGGCGCCCGCAGATaGGGGGCCCTAGTAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPGGARR*GALVGA
Trigger: GGCCCCTACTAGGGCCCCCCATCTGCGGGCGCCACC...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTGCTCCACCTCCCCCTaGGTCCACTTGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSCSTSP*VHLRGL
Trigger: CAGCCCCCGCAAGTGGACCCAGGGGGAGGTGGAGCA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACGGAGCGCAGCGACTTaGCCGAGGAAGGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPRSAAT*PRKAAS
Trigger: TGAAGCGGCCTTCCTCGGTCAAGTCGCTGCGCTCCG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAATGGCGCCGCTGTCCATaGGGCCCTGCAGCCCCGACC +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQWRRCP*GPAAPT
Trigger: GGTCGGGGCTGCAGGGCCGCATGGACAGCGGCGCCA...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGTGTCCCGGGCTGCCTaGAGGTCCTTTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSVSRAA*RSFSSR
Trigger: GCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACAC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACAGACACAGCGTCCGTaGTGGCAGGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPQTQRP*WQALRQ
Trigger: CTGCCTCAGGGCCTGCCAGCACGGACGCTGTGTCTG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGACACAGCGTCCGTaGTGGCAGGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSQTQRP*WQALRQ
Trigger: CTGCCTCAGGGCCTGCCAGCACGGACGCTGTGTCTG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCACACAGCGTCCGTGCTaGCAGGCCCTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGTQRPC*QALRQG
Trigger: CCCCTGCCTCAGGGCCTGCCAGCACGGACGCTGTGT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGCTCCCTCGAAGAAATaGCCCCTGGGACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSAPSKK*PLGRGA
Trigger: GGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAAGCCGGCACACGTACTaGCTCTGGGGTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSRHTY*LWGPGE
Trigger: CTCCCCAGGACCCCAGAGCCAGTACGTGTGCCGGCT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCGCACCTACCAGCCCCTaGGTTGGGGACGACATGGGA +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGAPTSP*VGDDMG
Trigger: TCCCATGTCGTCCCCAACCCAGGGGCTGGTAGGTGC...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGACCACAGGTCTGAGTaGGACCCCCTGTCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSDHRSE*DPLSVR
Trigger: CCGCACTGACAGGGGGTCTCACTCAGACCTGTGGTC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCGCTGGACCACAGGTCTaGGTGAGACCCCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGAGPQV*VRPPVS
Trigger: ACTGACAGGGGGTCTCACTCAGACCTGTGGTCCAGC...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTGGGAGTGCAGAGTTaGCACCTGCCGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLGVQS*HLPGGF
Trigger: GAAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGGGAACGCAGAGCCTaGAGGCGGCCACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGRERRA*RRPPPS
Trigger: AGAGGGAGGTGGCCGCCTGCAGGCTCTGCGTTCCCT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCACCACTGTGGGGGATaGGGCCGGGGTCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGHHCGG*GRGLRV
Trigger: AACACGGAGACCCCGGCCCCATCCCCCACAGTGGTG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCGAAGAAATGGCCCCTaGGACGGGGTGCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSRRNGP*DGVPTL
Trigger: GAGAGTGGGCACCCCGTCCCAGGGGCCATTTCTTCG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCGGCACACGTACTaGCTCTGGGGTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSRHTY*LWGPGE
Trigger: CTCCCCAGGACCCCAGAGCCAGTACGTGTGCCGGCT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGTCCGATACGGCGGCTaGGACACAGGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSVRYGG*DTGHFQ
Trigger: CTGAAAGTGGCCTGTGTCTCAGCCGCCGTATCGGAC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGCTTCACTGGGCATCTaGGACCAGCGTGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPASLGI*DQRGLS
Trigger: TGACAGGCCACGCTGGTCTCAGATGCCCAGTGAAGC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCTGGGAGCCCAGCTTATaGTCCCAGACGGCATGCAGT +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGWEPSL*SQTACS
Trigger: ACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCA...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACTTGGCCCAGCTGCTTaGCCTCCGTTCCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLGPAA*PPFLVP
Trigger: AGGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCCAGTGTCTGTGTGCTaGTCCTGCCCTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSPVSVC*SCPPAS
Trigger: AGAGGCAGGAGGGCAGGAGCAGCACACAGACACTGG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGCTTCATCCGGACGCTaGGTCGCTCCAGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSASSGR*VAPGSF
Trigger: GAAACTCCCTGGAGCGACGCAGCGTCCGGATGAAGC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGCCGTATTCACAGCTTaGCCCAGCTGCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPAVFTA*PSCLPS
Trigger: GGAGGGCAAGCAGCTGGGCCAAGCTGTGAATACGGC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGGCCATGACTCCCACTaGCTTGAGCTCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSGHDSH*LELPAL
Trigger: CAGAGCAGGGAGCTCAAGCCAGTGGGAGTCATGGCC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACACACGTACTGGCTCTaGGGTCCTGGGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPHTYWL*GPGEKV
Trigger: GACCTTCTCCCCAGGACCCCAGAGCCAGTACGTGTG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACACGTACTGGCTCTaGGGTCCTGGGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSHTYWL*GPGEKV
Trigger: GACCTTCTCCCCAGGACCCCAGAGCCAGTACGTGTG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACTCACGCAACCACTGTaGCAGCTCCTTCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLTQPL*QLLLPV
Trigger: CACGGGGAGAAGGAGCTGCCACAGTGGTTGCGTGAG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGTAAAACACTGGCACTaGGGACCGTCCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPVKHWH*GPSQGG
Trigger: CCCACCCTGGGACGGTCCCCAGTGCCAGTGTTTTAC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTCCATCACCGCCCATaGGTTCCCAGTAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLHHRP*VPSSLE
Trigger: CTCCAGGCTACTGGGAACCCATGGGCGGTGATGGAG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGCTGGACCACAGGTCTaGGTGAGACCCCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGAGPQV*VRPPVS
Trigger: ACTGACAGGGGGTCTCACTCAGACCTGTGGTCCAGC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGTCCGATACGGCGGCTaGGACACAGGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGVRYGG*DTGHFQ
Trigger: CTGAAAGTGGCCTGTGTCTCAGCCGCCGTATCGGAC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCGCCTGGAGAAGGCCATaGATTTCAGCGTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGAWRRP*ISAFPV
Trigger: CACAGGGAACGCTGAAATTCATGGCCTTCTCCAGGC...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCATGTGTTCAGAGACGTaGAGCCACGGGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSMCSET*SHGAGG
Trigger: TCCTCCTGCCCCGTGGCTTCACGTCTCTGAACACAT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCATCCCATTGCCCCCATaGAGCTGGAACCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSIPLPP*SWNHGQ
Trigger: CTGGCCATGGTTCCAGCTTCATGGGGGCAATGGGAT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGTTGCTGGTACTCCTaGTGTGCAAGCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSCWYS*CASSRR
Trigger: GCGCCTGGAGCTTGCACAGCAGGAGTACCAGCAACT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATCGGGTCGCACCCACTaGTTCCGATTCGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSGRTH*FRFVTV
Trigger: GACAGTGACGAATCGGAAGCAGTGGGTGCGACCCGA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGAGACCAAGCTGACCTaGGAGCCCAGCTTATGCTCC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSETKLT*EPSLCS
Trigger: GGAGCATAAGCTGGGCTCCCAGGTCAGCTTGGTCTC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCCCCGAGATGTCTGTCTaGGAGCTCACATCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGPEMSV*ELTSRY
Trigger: GTACCTGGATGTGAGCTCCCAGACAGACATCTCGGG...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATTGCCACCTGCCGGGTaGCTTCCTCCAGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLPPAG*LPPVLS
Trigger: TGAGAGAACTGGAGGAAGCCACCCGGCAGGTGGCAA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTTGCCACCTGCCGGGTaGCTTCCTCCAGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLPPAG*LPPVLS
Trigger: TGAGAGAACTGGAGGAAGCCACCCGGCAGGTGGCAA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGCCACCTCATCCTCGTaGATGGTGGTGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPATSSS*MVVMQP
Trigger: AGGCTGCATCACCACCATCCACGAGGATGAGGTGGC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTGCCTTCTGGGTCTTaGCCACCTCATCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLPSGS*PPHPRG
Trigger: TCCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACTGCCTTCTGGGTCTTaGCCACCTCATCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLPSGS*PPHPRG
Trigger: TCCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACTTGCCCTCCGTTCCTaGTTCCTCCAGCCGGTATCT +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLALRS*FLQPVS
Trigger: AGATACCGGCTGGAGGAACCAGGAACGGAGGGCAAG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTTGCCCTCCGTTCCTaGTTCCTCCAGCCGGTATCT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLALRS*FLQPVS
Trigger: AGATACCGGCTGGAGGAACCAGGAACGGAGGGCAAG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGGCCATGACTCCCACTaGCTTGAGCTCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGGHDSH*LELPAL
Trigger: CAGAGCAGGGAGCTCAAGCCAGTGGGAGTCATGGCC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCGCTCCCTCGAAGAAATaGCCCCTGGGACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVAAPSKK*PLGRGA
Trigger: GGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGC...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGCTCCTTCTCCCCGTaGCTCTTGGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSSFSP*LLACSS
Trigger: GCTGGAACAAGCCAAGAGCCACGGGGAGAAGGAGCT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAAGCTCCTTCTCCCCGTaGCTCTTGGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSSFSP*LLACSS
Trigger: GCTGGAACAAGCCAAGAGCCACGGGGAGAAGGAGCT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCTCACGCAACCACTGTaGCAGCTCCTTCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGLTQPL*QLLLPV
Trigger: CACGGGGAGAAGGAGCTGCCACAGTGGTTGCGTGAG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGGTTCCTTACAGCTCTaGCCTCGGAGCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSGSLQL*PRSLCT
Trigger: TGTGCACAGGCTCCGAGGCCAGAGCTGTAAGGAACC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAAGCTCGCCGGGTTTGTaGCTTCTGCCTCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQSSPGL*LLPPPG
Trigger: ACCTGGCGGAGGCAGAAGTCACAAACCCGGCGAGCT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGCTCGTGCTGGAGGTaGACCATCTCTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSSCWR*TISLFS
Trigger: GCTGAAGAGAGAGATGGTTCACCTCCAGCACGAGCT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGAAAGCCACGCTCTTTaGACTGCAGCTCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSESHAL*TAARAG
Trigger: TCCAGCACGAGCTGCAGTTCAAAGAGCGTGGCTTTC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGTGGTGATGCAGCCTaGGGGCCGGAAGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAGGDAA*GPEAGG
Trigger: GCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCCAAACTCCAAGGAGTTaGGGAAGGCATCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGQTPRS*GRHHQP
Trigger: TGGCTGGTGATGCCTTCCTCAACTCCTTGGAGTTTG...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCACTGTCTCCAGCCACTaGCTCGTCCGATACGGCGGC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVATVSSH*LVRYGG
Trigger: GCCGCCGTATCGGACGAGTCAGTGGCTGGAGACAGT...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGCTAAGGAATGGTTCTaGATGGCTCAGCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPAKEWF*MAQLDP
Trigger: GGGGTCCAGCTGAGCCATTCAGAACCATTCCTTAGC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCATCTGCCTCCGCCAGGTaGGGCTCGGGCGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAASASAR*GSGGAG
Trigger: ACCTGCACCGCCCGAGCCGCACCTGGCGGAGGCAGA...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACAGACGGCATGCAGTTaGTGGTACTCCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPQTACS*WYSCCA
Trigger: TGCACAGCAGGAGTACCAGCAACTGCATGCCGTCTG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTCTCCAGAGAGCTGCTaGTGGACCACAGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSPESC*WTTGLS
Trigger: ACTCAGACCTGTGGTCCAGCAGCAGCTCTCTGGAGA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCCTGGGAGTGCAGAGTTaGCACCTGCCGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVALGVQS*HLPGGF
Trigger: GAAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAG...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCCCTGAGGACAGGGACTaGATGCTGCTTGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGPEDRD*MLLERL
Trigger: AAGTCTCTCAAGCAGCATGCAGTCCCTGTCCTCAGG...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGCAGGAACTCCACCTTaGTCTGCAGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSAGTPP*SAALSP
Trigger: TGGACTCAGAGCTGCAGAGCAAGGTGGAGTTCCTGC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATCATGGACTTTGGGGTaGCAGACAGGGAACGCAGAG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSWTLG*QTGNAE
Trigger: CTCTGCGTTCCCTGTCTGGCACCCCAAAGTCCATGA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGAAGCACCCAGTCTCTaGACGGAAGCCTCGTACACA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPEAPSL*TEASYT
Trigger: TGTGTACGAGGCTTCCGTGCAGAGACTGGGTGCTTC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCACCAGTGTCTGTGTGCTaGTCCTGCCCTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPPVSVC*SCPPAS
Trigger: AGAGGCAGGAGGGCAGGAGCAGCACACAGACACTGG...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTGGGTCAATTGGCTGTaGCAGGTTCTTGTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSWVNWL*QVLVAC
Trigger: GCAGGCGACAAGAACCTGGCACAGCCAATTGACCCA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATGGGTCAATTGGCTGTaGCAGGTTCTTGTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPWVNWL*QVLVAC
Trigger: GCAGGCGACAAGAACCTGGCACAGCCAATTGACCCA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAAGGGCCGGAAGCCGGTaGCCCCCTCCAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAARAGSR*PPPGAG
Trigger: TCCTGCTCCTGGAGGGGGCCACCGGCTTCCGGCCCT...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGGAGGTCATGGACTTTaGGGTGCCAGACAGGGAACG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGGGHGL*GARQGT
Trigger: CGTTCCCTGTCTGGCACCCCAAAGTCCATGACCTCC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGGGATAGGGAGGTCATaGACTTTGGGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPGIGRS*TLGCQT
Trigger: TGTCTGGCACCCCAAAGTCCATGACCTCCCTATCCC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGGCACTCTTCCAGATaGCTCCTGTCGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSRHSSR*LLSVVQ
Trigger: CTGTACCACCGACAGGAGCCATCTGGAAGAGTGCCT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGACACAGCGTCCGTGCTaGCAGGCCCTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRTQRPC*QALRQG
Trigger: CCCCTGCCTCAGGGCCTGCCAGCACGGACGCTGTGT...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCCGAAGAAATGGCCCCTaGGACGGGGTGCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVARRNGP*DGVPTL
Trigger: GAGAGTGGGCACCCCGTCCCAGGGGCCATTTCTTCG...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGCACCGAGATCTCCTaGGTCAATTGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSTEIS*VNWLCQ
Trigger: CTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACATCTGAGACCAGCGTaGCCTGTCACCCACATAGAC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPHLRPA*PVTHID
Trigger: GTCTATGTGGGTGACAGGCCACGCTGGTCTCAGATG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATCTGAGACCAGCGTaGCCTGTCACCCACATAGAC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSHLRPA*PVTHID
Trigger: GTCTATGTGGGTGACAGGCCACGCTGGTCTCAGATG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGAAAGCCACGCTCTTTaGACTGCAGCTCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGESHAL*TAARAG
Trigger: TCCAGCACGAGCTGCAGTTCAAAGAGCGTGGCTTTC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGGACTGCATGCTGCTTaGGAGACTTTTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSGLHAA*ETFQLG
Trigger: TCCCAGCTGAAAAGTCTCTCAAGCAGCATGCAGTCC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGCCTCGTGGATGGTGGTaGTGCAGCCTGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRPRGWW*CSLRAG
Trigger: TCCGGCCCTCAGGCTGCATCACCACCATCCACGAGG...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAAAATGCAGCAGCTTCTaGAGCACCCAGTCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPKCSSF*STQSLH
Trigger: GTGCAGAGACTGGGTGCTTCAGAAGCTGCTGCATTT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTACTTCAGGGCAATCTaGATTCGGGTCGCACCCACT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSYFRAI*IRVAPT
Trigger: AGTGGGTGCGACCCGAATTCAGATTGCCCTGAAGTA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTAGACCTCCGCCAGGCTaGTCTGGGCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLRPPPG*SGRLPG
Trigger: GCCTGGGAGGCGCCCAGATCAGCCTGGCGGAGGTCT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAGCCACAGGAGCAGCATaGAGCACAAGCTGTAGCACC +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPATGAA*STSCST
Trigger: GGTGCTACAGCTTGTGCTTCATGCTGCTCCTGTGGC...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCTCCCTGCAGCCGGGTaGCGTCCCTCCTCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWLPAAG*RPSSPL
Trigger: GAGCGGAGAGGAGGGACGGCACCCGGCTGCAGGGAG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAATGCAGAGTTGCCACCTaGCGGGTGGCTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQCRVAT*RVASSS
Trigger: ACTGGAGGAAGCCACCCGGCAGGTGGCAACTCTGCA...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGAAGCACCCAGTCTCTaGACGGAAGCCTCGTACACA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGEAPSL*TEASYT
Trigger: TGTGTACGAGGCTTCCGTGCAGAGACTGGGTGCTTC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACTTCTCCAGCTCCACTaGTGTCTGTTCCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLLQLH*CLFQQS
Trigger: GCTCTGTTGGAACAGACAGCAGTGGAGCTGGAGAAG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTTCTCCAGCTCCACTaGTGTCTGTTCCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLLQLH*CLFQQS
Trigger: GCTCTGTTGGAACAGACAGCAGTGGAGCTGGAGAAG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCAGGTTCTTGTCGCCTaGAGGTCTAACTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGQVLVA*RSNSRS
Trigger: GGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCCACATAGACTAGGCTaGTTAGCCCACCCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSPHRLG*LAHPAY
Trigger: ATAGGCTGGGTGGGCTAAGCAGCCTAGTCTATGTGG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATGGCTGGAAGAGGGTCTaGTGCCTTCCGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQSSEECRHRCHRAARDHGWKRV*CLPQRW
Trigger: CCACCTCTGCGGAAGGCAGCAGACCCTCTTCCAGCC...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAGGTCGATCCAGCTGGTaGTGCGGTTCGTGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPGRSSW*CGSCGL
Trigger: TAGACCACACGAACCGCACCACCAGCTGGATCGACC...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCCCGAGATGTCTGTCTaGGAGCTCACATCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGPEMSV*ELTSRY
Trigger: GTACCTGGATGTGAGCTCCCAGACAGACATCTCGGG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTCAAGCTTGGCCAGCTaGATCTTCAGGTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSSLAS*IFRLAI
Trigger: GATCGCCAACCTGAAGATCCAGCTGGCCAAGCTTGA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGAGAGACTTTTCAGCTaGGAGTGCAGAGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPERLFS*ECRVAT
Trigger: GGTGGCAACTCTGCACTCCCAGCTGAAAAGTCTCTC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTAGGGCCGGAAGCCGGTaGCCCCCTCCAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLRAGSR*PPPGAG
Trigger: TCCTGCTCCTGGAGGGGGCCACCGGCTTCCGGCCCT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCGGTATCTTTCCTaGGCGCTGTTACCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSRYLS*ALLPRL
Trigger: GAGCCTTGGTAACAGCGCCCAGGAAAGATACCGGCT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCGGGCTGGATAGGACATaGATACCCAGAACACCTCAT +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGGLDRT*IPRTPH
Trigger: ATGAGGTGTTCTGGGTATCCATGTCCTATCCAGCCC...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGGCACTCTTCCAGATaGCTCCTGTCGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGRHSSR*LLSVVQ
Trigger: CTGTACCACCGACAGGAGCCATCTGGAAGAGTGCCT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR CAA 72 bp CATGGGAGCCAAAGGGATGGGTCACTTACAGCCAGCTaGGGGCATTTGCCCCGTTGCTGTGGCCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: HGSQRDGSLTAS*GHLPRCCGQCP
Trigger: AGGGCATTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTTGGCTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACGAGGATCCTCAATCTaGGTGGTTTTGGTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPRGSSI*VVLVLW
Trigger: CCACAACACCAAAACCACTCAGATTGAGGATCCTCG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCGAGGATCCTCAATCTaGGTGGTTTTGGTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSRGSSI*VVLVLW
Trigger: CCACAACACCAAAACCACTCAGATTGAGGATCCTCG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCACCTTCTCTGCCAACTaGTTGTTGCTGTTGATGCCG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSTFSAN*LLLLMP
Trigger: CGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCATCGAAGGCGCAATCTaGCCTTCTCTGCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSIEGAI*PSLPTD
Trigger: ATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGAT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAGTCAGTGAAGCTGGCTaGAGTGGAGGAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQVSEAG*SGGVQA
Trigger: AGCCTGGACTCCTCCACTTCAGCCAGCTTCACTGAC...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGGTGGTGATGCAGCCTaGGGGCCGGAAGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAGGDAA*GPEAGG
Trigger: GCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCCCAGAACACCTCATTaGACACTAGAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSPRTPH*TLECLR
Trigger: CCTCAGACACTCTAGTGTTCAATGAGGTGTTCTGGG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCATCATCTTGTCTGTCTaGAGCTCACCCTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSIILSV*SSPLCS
Trigger: GGAGCACAAGGGTGAGCTTCAGACAGACAAGATGAT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAATGCCATCTTCTCCCTaGAAGACTGAACTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPMPSSP*KTELLG
Trigger: CCCCAGAAGTTCAGTCTTTCAGGGAGAAGATGGCAT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCTGCCTTTTGTGCCAATaGATTCAGGCTCCAAGATCC +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGCLLCQ*IQAPRS
Trigger: GGATCTTGGAGCCTGAATTCATTGGCACAAAAGGCA...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGCGGGTTTGTGACTTCTaGCTCCGCCAGGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRRVCDF*LRQVRL
Trigger: GAGCCGCACCTGGCGGAGGCAGAAGTCACAAACCCG...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCACATCTTCCCAAGCGCTaGCGGCGCTCCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAHLPKR*RRSPMQ
Trigger: CTGCATGGGGGAGCGCCGGCAGCGCTTGGGAAGATG...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAATGCTCCCAGACGGCATaGAGTTGCTGGTACTCCTGC +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQCSQTA*SCWYSC
Trigger: GCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCA...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCATCTCCGTCAGCGCCTTaGTCTGGGTGTCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAASPSAP*SGCPGL
Trigger: CAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGA...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGGAACAGGCAGGTTGTaGTTTCAGAGCAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPGTGRL*FQSKEG
Trigger: TCCTTCCTTGCTCTGAAAGCACAACCTGCCTGTTCC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCACAGACACAGCGTCCGTaGTGGCAGGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAQTQRP*WQALRQ
Trigger: CTGCCTCAGGGCCTGCCAGCACGGACGCTGTGTCTG...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCACAGGTTCTTGTCGCCTaGAGGTCTAACTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPQVLVA*RSNSRS
Trigger: GGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTG...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCCTCACTGTCAAGCTTaGCCAGCTGGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGPHCQA*PAGSSG
Trigger: ACCTGAAGATCCAGCTGGCCAAGCTTGACAGTGAGG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCGCCACCTCATCCTCGTaGATGGTGGTGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVAATSSS*MVVMQP
Trigger: AGGCTGCATCACCACCATCCACGAGGATGAGGTGGC...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATCAGTTCACAAAGAGTaGCACTCAGCTCCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSVHKE*HSAPGL
Trigger: AAGACCCGGAGCTGAGTGCCACTCTTTGTGAACTGA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTCAGTTCACAAAGAGTaGCACTCAGCTCCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSVHKE*HSAPGL
Trigger: AAGACCCGGAGCTGAGTGCCACTCTTTGTGAACTGA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGGGCTGGATAGGACATaGATACCCAGAACACCTCAT +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPGLDRT*IPRTPH
Trigger: ATGAGGTGTTCTGGGTATCCATGTCCTATCCAGCCC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACTTCTGGTGAAGGGCTaGATAGGACATGGATACCCA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLLVKG*IGHGYP
Trigger: TGGGTATCCATGTCCTATCCAGCCCTTCACCAGAAG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGATGGCTCCTGTCGGTaGTACAGACATCGACTCTTA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSDGSCR*YRHRLL
Trigger: TAAGAGTCGATGTCTGTACCACCGACAGGAGCCATC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCCGGGGTCTCCGTGTTaGTCTCTTTGTCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGPGSPC*SLCPPL
Trigger: TAAAGGTGGACAAAGAGACCAACACGGAGACCCCGG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAAGCACCGAGATCTCCTaGGTCAATTGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPSTEIS*VNWLCQ
Trigger: CTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCT...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCATCCCCAGTCTAACTTaGGGATGTGGATTCCCAATG +
Preference number: 4 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGIPSLT*GCGFPM
Trigger: CATTGGGAATCCACATCCCCAAGTTAGACTGGGGAT...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAAGCTCGTGCTGGAGGTaGACCATCTCTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQSSCWR*TISLFS
Trigger: GCTGAAGAGAGAGATGGTTCACCTCCAGCACGAGCT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCACTGATTGTTGCTGTTaGTGCCGAAGCTTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGTDCCC*CRSFPR
Trigger: TCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCACCTTCTCTGCCAACTaGTTGTTGCTGTTGATGCCG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGTFSAN*LLLLMP
Trigger: CGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCTTGCTCTGCAGCTCTaGGTCCAGCTGCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PQSSEECRHRCHRAARDHLALQL*VQLLKG
Trigger: CCCTTTGAGCAGCTGGACTCAGAGCTGCAGAGCAAG...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGGTGGTGATGCAGCCTaGGGGCCGGAAGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPGGDAA*GPEAGG
Trigger: GCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCCTCGTGGATGGTGGTaGTGCAGCCTGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLPRGWW*CSLRAG
Trigger: TCCGGCCCTCAGGCTGCATCACCACCATCCACGAGG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCAGACCTCCGCCAGGCTaGTCTGGGCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPRPPPG*SGRLPG
Trigger: GCCTGGGAGGCGCCCAGATCAGCCTGGCGGAGGTCT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTTCTCCCTGAAAGACTaGACTTCTGGGGGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSFSLKD*TSGGSL
Trigger: TAAGGAACCCCCAGAAGTTCAGTCTTTCAGGGAGAA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCATGCCATCTTCTCCCTaGAAGACTGAACTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGMPSSP*KTELLG
Trigger: CCCCAGAAGTTCAGTCTTTCAGGGAGAAGATGGCAT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCTCAGCGTTCCCTGTGTaGCTCACCAATAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVASAFPV*LTNRMR
Trigger: CCGCATCCTATTGGTGAGTCACACAGGGAACGCTGA...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGATGCTGCAGGGGTATaGGGGGCTGACCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAADAAGV*GADPCW
Trigger: CCAGCAAGGGTCAGCCCCTCATACCCCTGCAGCATC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACGGAGCGCAGCGACTTaGCCGAGGAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDARSAAT*PRKAVG
Trigger: CCCCACAGCCTTCCTCGGTCAAGTCGCTGCGCTCCG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393895.7
ENST00000524038.5
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGGACAGGGACTGCATaGTGCTTGAGAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSRTGTA*CLRDFS
Trigger: TGAAAAGTCTCTCAAGCAGCATGCAGTCCCTGTCCT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAAGGACAGGGACTGCATaGTGCTTGAGAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPRTGTA*CLRDFS
Trigger: TGAAAAGTCTCTCAAGCAGCATGCAGTCCCTGTCCT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGGAACAGGCAGGTTGTaGTTTCAGAGCAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGGTGRL*FQSKEG
Trigger: TCCTTCCTTGCTCTGAAAGCACAACCTGCCTGTTCC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCCGGGCCTCACCATTTTaGCTGTCTCTGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVARASPF*LSLPGF
Trigger: AAACCCAGGCAGAGACAGGCAAAATGGTGAGGCCCG...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCCCGGGATTTTGCAGTaGCAATTTCAGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSPGILQ*QFQLSG
Trigger: TCCTGAAAGCTGAAATTGCCACTGCAAAATCCCGGG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGTCAGCGCCTTGCTCTaGGTGTCCCGGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAVSALL*VSRAAC
Trigger: GCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGAC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATTTGCCACCTGCCGGGTaGCTTCCTCCAGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PQSSEECRHRCHRAARDHLPPAG*LPPVLS
Trigger: TGAGAGAACTGGAGGAAGCCACCCGGCAGGTGGCAA...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCAGGGCCGGAAGCCGGTaGCCCCCTCCAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPRAGSR*PPPGAG
Trigger: TCCTGCTCCTGGAGGGGGCCACCGGCTTCCGGCCCT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGCCGTATTCACAGCTTaGCCCAGCTGCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRAVFTA*PSCLPS
Trigger: GGAGGGCAAGCAGCTGGGCCAAGCTGTGAATACGGC...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGGGCTGGATAGGACATaGATACCCAGAACACCTCAT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGGLDRT*IPRTPH
Trigger: ATGAGGTGTTCTGGGTATCCATGTCCTATCCAGCCC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCTTCTGGTGAAGGGCTaGATAGGACATGGATACCCA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGLLVKG*IGHGYP
Trigger: TGGGTATCCATGTCCTATCCAGCCCTTCACCAGAAG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGATGGCTCCTGTCGGTaGTACAGACATCGACTCTTA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGDGSCR*YRHRLL
Trigger: TAAGAGTCGATGTCTGTACCACCGACAGGAGCCATC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGCTCCCTCGAAGAAATaGCCCCTGGGACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLAPSKK*PLGRGA
Trigger: GGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTAGCCGGCACACGTACTaGCTCTGGGGTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSRHTY*LWGPGE
Trigger: CTCCCCAGGACCCCAGAGCCAGTACGTGTGCCGGCT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACAAAAGGTGGCTTTTTaGACAGAGTGGAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPQKVAF*TEWSCH
Trigger: GTGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCATCTCCTGGGTCAATTaGCTGTGCCAGGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGISWVN*LCQVLV
Trigger: GACAAGAACCTGGCACAGCCAATTGACCCAGGAGAT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGCTCACGCAACCACTGTaGCAGCTCCTTCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRLTQPL*QLLLPV
Trigger: CACGGGGAGAAGGAGCTGCCACAGTGGTTGCGTGAG...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGAAAGACTGAACTTCTaGGGGTTCCTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPERLNF*GFLTAL
Trigger: CAGAGCTGTAAGGAACCCCCAGAAGTTCAGTCTTTC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGCAACCTCCGCCTCCTaGGTTCAAGCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAATSAS*VQALAT
Trigger: GGTGGCCAAGGCTTGAACCCAGGAGGCGGAGGTTGC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTTTGCCCCGTTGCTGTaGCCAATGCCCTTAACAGAA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGFAPLL*PMPLTE
Trigger: TTCTGTTAAGGGCATTGGCCACAGCAACGGGGCAAA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCATGGGAGCCAAAGGGATaGGTCACTTACAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPWEPKG*VTYSQL
Trigger: AAGCTGGCTGTAAGTGACCCATCCCTTTGGCTCCCA...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCTGCCTTCCGCAGAGGTaGTCTGGTTCTCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVACLPQR*SGSPHK
Trigger: TTTGTGGGGAGAACCAGACCACCTCTGCGGAAGGCA...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGGAAGGCTGTGGGGGTaGGGACGGCCGCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAGRLWG*GRPLHP
Trigger: CGGATGAAGCGGCCGTCCCCACCCCCACAGCCTTCC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393895.7
ENST00000524038.5
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCGTGGATGGTGGTaGTGCAGCCTGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAPRGWW*CSLRAG
Trigger: TCCGGCCCTCAGGCTGCATCACCACCATCCACGAGG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTACTGTCTCCAGCCACTaGCTCGTCCGATACGGCGGC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLTVSSH*LVRYGG
Trigger: GCCGCCGTATCGGACGAGTCAGTGGCTGGAGACAGT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAAAATGCAGCAGCTTCTaGAGCACCCAGTCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQKCSSF*STQSLH
Trigger: GTGCAGAGACTGGGTGCTTCAGAAGCTGCTGCATTT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTCAAGTATTTGTAGCTaGGAAGGTTGTACCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSSICS*EGCTSE
Trigger: CTCGCTGGTACAACCTTCTCAGCTACAAATACTTGA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTTCTCCCTGAAAGACTaGACTTCTGGGGGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGFSLKD*TSGGSL
Trigger: TAAGGAACCCCCAGAAGTTCAGTCTTTCAGGGAGAA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCGGAGCGCAGCGACTTaGCCGAGGAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPRSAAT*PRKAVG
Trigger: CCCCACAGCCTTCCTCGGTCAAGTCGCTGCGCTCCG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393895.7
ENST00000524038.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACATCCAGTTTGTAGCTaGCCTGAGCATCAGACATTT +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPHPVCS*PEHQTF
Trigger: AAATGTCTGATGCTCAGGGCAGCTACAAACTGGATG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCTGGGTGTCCCGGGCTaGCTGCAGGTCCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLLGVPG*LQVLFQ
Trigger: CTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCACAGGGACTGCATGCTaGTTGAGAGACTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGTGTAC*LRDFSA
Trigger: AGCTGAAAAGTCTCTCAAGCAGCATGCAGTCCCTGT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAACTTTCTGGTCTTGTTaGTGCAACAGAGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPTFWSC*CNRAER
Trigger: CCTTTCTGCTCTGTTGCAGCAACAAGACCAGAAAGT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACAGACACAGCGTCCGTaGTGGCAGGCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAQTQRP*WQALRQ
Trigger: CTGCCTCAGGGCCTGCCAGCACGGACGCTGTGTCTG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCCCAGCCTATCACACTaGCCGCTCCACGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLPSLSH*PLHVGQ
Trigger: CTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTGCTCCACCTCCCCCTaGGTCCACTTGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPCSTSP*VHLRGL
Trigger: CAGCCCCCGCAAGTGGACCCAGGGGGAGGTGGAGCA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAACCGGGGTCTCCGTGTTaGTCTCTTTGTCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQPGSPC*SLCPPL
Trigger: TAAAGGTGGACAAAGAGACCAACACGGAGACCCCGG...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACACCACTGTGGGGGATaGGGCCGGGGTCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAHHCGG*GRGLRV
Trigger: AACACGGAGACCCCGGCCCCATCCCCCACAGTGGTG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGCTCCCTCGAAGAAATaGCCCCTGGGACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAAPSKK*PLGRGA
Trigger: GGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGCTTTTTGGACAGAGTaGAGCTGTCACTATCACTCC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGAFWTE*SCHYHS
Trigger: GGAGTGATAGTGACAGCTCCACTCTGTCCAAAAAGC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCAAAAGGTGGCTTTTTaGACAGAGTGGAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGQKVAF*TEWSCH
Trigger: GTGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGAAAGACTGAACTTCTaGGGGTTCCTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGERLNF*GFLTAL
Trigger: CAGAGCTGTAAGGAACCCCCAGAAGTTCAGTCTTTC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAGGGTTGGGGACGACATaGGATGATGCTCATATGAAC +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPGLGTT*DDAHMN
Trigger: GTTCATATGAGCATCATCCCATGTCGTCCCCAACCC...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTCCGCTCCACCGCTCTaGGCTCGCCGGGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSAPPL*ARRVCD
Trigger: GTCACAAACCCGGCGAGCTCAGAGCGGTGGAGCGGA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATTGCAGTCAGCAAAGGTaGGCGGTTTGGTGTACCTGT +
Preference number: 4 (lower is better)
Translates to: PQSSEECRHRCHRAARDHCSQQR*AVWCTC
Trigger: ACAGGTACACCAAACCGCTCACCTTTGCTGACTGCA...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCATTTTCTTCAGGGTCTaGAAGCCACGCTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGIFFRV*KPRSLN
Trigger: GTTCAAAGAGCGTGGCTTTCAGACCCTGAAGAAAAT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGGTCCGATACGGCGGCTaGGACACAGGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWVRYGG*DTGHFQ
Trigger: CTGAAAGTGGCCTGTGTCTCAGCCGCCGTATCGGAC...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTCAAGTATTTGTAGCTaGGAAGGTTGTACCAGCGAG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSSICS*EGCTSE
Trigger: CTCGCTGGTACAACCTTCTCAGCTACAAATACTTGA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCGGAGCGCAGCGACTTaGCCGAGGAAGGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPRSAAT*PRKAAS
Trigger: TGAAGCGGCCTTCCTCGGTCAAGTCGCTGCGCTCCG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000524228.5
CDS-3UTR TCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCATCATCTTGTCTGTCTaGAGCTCACCCTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVAIILSV*SSPLCS
Trigger: GGAGCACAAGGGTGAGCTTCAGACAGACAAGATGAT...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCATTCTCCCTGAAAGACTaGACTTCTGGGGGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPFSLKD*TSGGSL
Trigger: TAAGGAACCCCCAGAAGTTCAGTCTTTCAGGGAGAA...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAATGCCATCTTCTCCCTaGAAGACTGAACTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQMPSSP*KTELLG
Trigger: CCCCAGAAGTTCAGTCTTTCAGGGAGAAGATGGCAT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGGCTTCACTGGGCATCTaGGACCAGCGTGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWASLGI*DQRGLS
Trigger: TGACAGGCCACGCTGGTCTCAGATGCCCAGTGAAGC...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATATGAACAAACTGTaGAGTCATCTCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSHMNKL*SHLSLG
Trigger: ACCCAGAGAGAGATGACTTCACAGTTTGTTCATATG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATAAATGCCCCGACAGCTaGAGTGATGCTGAGATGCAC +
Preference number: 4 (lower is better)
Translates to: PQSSEECRHRCHRAARDHKCPDS*SDAEMH
Trigger: GTGCATCTCAGCATCACTTCAGCTGTCGGGGCATTT...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCTGGTACTCCTGCTGTaGAAGCTCCAGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWLVLLL*KLQALL
Trigger: CAGCAGCGCCTGGAGCTTGCACAGCAGGAGTACCAG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSQSDLL*QLIVAV
Trigger: AACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACTGGGTGTCCCGGGCTaGCTGCAGGTCCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDALGVPG*LQVLFQ
Trigger: CTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTCTCCGTCAGCGCCTTaGTCTGGGTGTCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSPSAP*SGCPGL
Trigger: CAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCAGGGAACGCAGAGCCTaGAGGCGGCCACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPRERRA*RRPPPS
Trigger: AGAGGGAGGTGGCCGCCTGCAGGCTCTGCGTTCCCT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACTCATGGACTTTGGGGTaGCAGACAGGGAACGCAGAG +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNSWTLG*QTGNAE
Trigger: CTCTGCGTTCCCTGTCTGGCACCCCAAAGTCCATGA...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTACAGCTTGGCCCAGCTaGTTGCCCTCCGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLTAWPS*LPSVPG
Trigger: ACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGCTGT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCACTTTCTGGTCTTGTTaGTGCAACAGAGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGTFWSC*CNRAER
Trigger: CCTTTCTGCTCTGTTGCAGCAACAAGACCAGAAAGT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCTTCTCCAGCTCCACTaGTGTCTGTTCCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: PQSSEECRHRCHRAARDHLLQLH*CLFQQS
Trigger: GCTCTGTTGGAACAGACAGCAGTGGAGCTGGAGAAG...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCCAGTGTCTGTGTGCTaGTCCTGCCCTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLPVSVC*SCPPAS
Trigger: AGAGGCAGGAGGGCAGGAGCAGCACACAGACACTGG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGCTTCATCCGGACGCTaGGTCGCTCCAGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLASSGR*VAPGSF
Trigger: GAAACTCCCTGGAGCGACGCAGCGTCCGGATGAAGC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCCAGCCTATCACACTaGCCGCTCCACGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAPSLSH*PLHVGQ
Trigger: CTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCACATAGACTAGGCTaGTTAGCCCACCCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: PQSSEECRHRCHRAARDHPHRLG*LAHPAY
Trigger: ATAGGCTGGGTGGGCTAAGCAGCCTAGTCTATGTGG...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTCTCAAATTGCGGTGTaGATAAGACTTACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSQIAV*IRLTEG
Trigger: TCCCTCTGTAAGTCTTATGCACACCGCAATTTGAGA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACGGGATAGGGAGGTCATaGACTTTGGGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNGIGRS*TLGCQT
Trigger: TGTCTGGCACCCCAAAGTCCATGACCTCCCTATCCC...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCACCACTGTGGGGGATaGGGCCGGGGTCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPHHCGG*GRGLRV
Trigger: AACACGGAGACCCCGGCCCCATCCCCCACAGTGGTG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACGAAGAAATGGCCCCTaGGACGGGGTGCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDARRNGP*DGVPTL
Trigger: GAGAGTGGGCACCCCGTCCCAGGGGCCATTTCTTCG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCACACGTACTGGCTCTaGGGTCCTGGGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLHTYWL*GPGEKV
Trigger: GACCTTCTCCCCAGGACCCCAGAGCCAGTACGTGTG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGTTTCGAACAAAAGGTaGCTTTTTGGACAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSVSNKR*LFGQSG
Trigger: TCCACTCTGTCCAAAAAGCCACCTTTTGTTCGAAAC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGCATCTGAGACCAGCGTaGCCTGTCACCCACATAGAC +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRHLRPA*PVTHID
Trigger: GTCTATGTGGGTGACAGGCCACGCTGGTCTCAGATG...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGGCCACCCAAGTAGCTaGGATTACAGGTATGCGCCA +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRGHPSS*DYRYAP
Trigger: TGGCGCATACCTGTAATCCCAGCTACTTGGGTGGCC...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACACATGGGTAAAACACTaGCACTGGGGACCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNTWVKH*HWGPSQ
Trigger: CTGGGACGGTCCCCAGTGCCAGTGTTTTACCCATGT...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CAA 72 bp TTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTaGGGCAGCCACATAAAAACACGTCACAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LAHPAYHTARST*GSHIKTRHSSR
Trigger: TCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR CAA 72 bp TGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTaGCTGTGGCCAATGCCCTTAACAGAAGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: WVTYSQLGAFAP*LWPMPLTEGQK
Trigger: TTTCTGCCCTTCTGTTAAGGGCATTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCTTGCTCTGCAGCTCTaGGTCCAGCTGCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLLALQL*VQLLKG
Trigger: CCCTTTGAGCAGCTGGACTCAGAGCTGCAGAGCAAG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCACTGTCTCCAGCCACTaGCTCGTCCGATACGGCGGC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPTVSSH*LVRYGG
Trigger: GCCGCCGTATCGGACGAGTCAGTGGCTGGAGACAGT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGCTTCACTGGGCATCTaGGACCAGCGTGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAASLGI*DQRGLS
Trigger: TGACAGGCCACGCTGGTCTCAGATGCCCAGTGAAGC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGGTCTAGAGAGGACCTaGCAGTCTGCATTTTATTTT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGGLERT*QSAFYF
Trigger: AAAATAAAATGCAGACTGTCAGGTCCTCTCTAGACC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTCATCTCTAACCTTTaGGTGGAAAATGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLISNL*VENAKE
Trigger: TTCCTTAGCATTTTCCACTCAAAGGTTAGAGATGAG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAAGGGGTATGAGGGGCTaGCCCTTGCTGGGACAACTG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDARGMRG*PLLGQL
Trigger: CAGTTGTCCCAGCAAGGGTCAGCCCCTCATACCCCT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACTGGTACTCCTGCTGTaGAAGCTCCAGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDALVLLL*KLQALL
Trigger: CAGCAGCGCCTGGAGCTTGCACAGCAGGAGTACCAG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCTGGGAGTGCAGAGTTaGCACCTGCCGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPLGVQS*HLPGGF
Trigger: GAAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGCAGGAACTCCACCTTaGTCTGCAGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAAGTPP*SAALSP
Trigger: TGGACTCAGAGCTGCAGAGCAAGGTGGAGTTCCTGC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTTCGGGTCGCACCCACTaGTTCCGATTCGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSGRTH*FRFVTV
Trigger: GACAGTGACGAATCGGAAGCAGTGGGTGCGACCCGA...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCAGTGTCTGTGTGCTaGTCCTGCCCTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAPVSVC*SCPPAS
Trigger: AGAGGCAGGAGGGCAGGAGCAGCACACAGACACTGG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAATAGCTGGTGCAACTTaGTTTGCTGAGTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQIAGAT*FAEWCN
Trigger: GTTGCACCACTCAGCAAAGCAAGTTGCACCAGCTAT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCATGGTCTCAACAGTCTaGATTTTTAATAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGMVSTV*IFNRLP
Trigger: GGGCAGCCTATTAAAAATGCAGACTGTTGAGACCAT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGCCACCTCATCCTCGTaGATGGTGGTGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLATSSS*MVVMQP
Trigger: AGGCTGCATCACCACCATCCACGAGGATGAGGTGGC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGCCGTATTCACAGCTTaGCCCAGCTGCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAAVFTA*PSCLPS
Trigger: GGAGGGCAAGCAGCTGGGCCAAGCTGTGAATACGGC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCGGATATTCACTTTCTaGTCTTGTTGCTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGRIFTF*SCCCNR
Trigger: TCTGTTGCAGCAACAAGACCAGAAAGTGAATATCCG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTAGCTCCTTCTCCCCGTaGCTCTTGGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSSFSP*LLACSS
Trigger: GCTGGAACAAGCCAAGAGCCACGGGGAGAAGGAGCT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGGTTCCTTACAGCTCTaGCCTCGGAGCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLGSLQL*PRSLCT
Trigger: TGTGCACAGGCTCCGAGGCCAGAGCTGTAAGGAACC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTGGGAAAGAAATGACTaGAAAGGGGAGAGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSWERND*KGESQK
Trigger: TTTTTGACTCTCCCCTTTCCAGTCATTTCTTTCCCA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGGTGAGAAATCGGGCTaGATAGCAGCTATACAGGGG +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRGEKSG*IAAIQG
Trigger: CCCCTGTATAGCTGCTATCCAGCCCGATTTCTCACC...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAATGGTGTTGTGGTCTATaGAGTAATCTCCAACCTGTG +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQWCCGL*SNLQPV
Trigger: CACAGGTTGGAGATTACTTCATAGACCACAACACCA...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAATTTTCTTCAGGGTCTaGAAGCCACGCTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQIFFRV*KPRSLN
Trigger: GTTCAAAGAGCGTGGCTTTCAGACCCTGAAGAAAAT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGACTGATTGTTGCTGTTaGTGCCGAAGCTTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRTDCCC*CRSFPR
Trigger: TCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGT...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGGTTACTCAGCTGGATaGTTAATATTGCAAATTGCT +
Preference number: 4 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSGYSAG*LILQIA
Trigger: AGCAATTTGCAATATTAATCATCCAGCTGAGTAACC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGCTTCACTGGGCATCTaGGACCAGCGTGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPASLGI*DQRGLS
Trigger: TGACAGGCCACGCTGGTCTCAGATGCCCAGTGAAGC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCCTTTCCTTTGCAGGTTaGCCTCATTTTCCTAATCCC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVALSFAG*PHFPNP
Trigger: GGGATTAGGAAAATGAGGTCAACCTGCAAAGGAAAG...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGACTGCAGATACAGTaGGGATGCTGCTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAGLQIQ*GCCCLL
Trigger: CAAAAGGCAGCAGCATCCTCACTGTATCTGCAGTCC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCGATCCAGCTGGTGGTaGGGTTCGTGTGGTCTATGT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLRSSWW*GSCGLC
Trigger: ACATAGACCACACGAACCGCACCACCAGCTGGATCG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACTTCAGCATATGTTCCTaGTCCCGCCGCCATTGTACT +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNFSICS*SRRHCT
Trigger: AGTACAATGGCGGCGGGAGCAGGAACATATGCTGAA...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATGCTCCCAGACGGCATaGAGTTGCTGGTACTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDACSQTA*SCWYSC
Trigger: GCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGAGACCCCCTGTCAGTaGGGAAGCCGTCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAETPCQ*GSRPST
Trigger: TGTTGAAGGACGGCTTCCGCACTGACAGGGGGTCTC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCACAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SAASEGGTTPSITAHGFPQSDLL*QLIVAV
Trigger: AACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTG...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCTTGGCCCAGCTGCTTaGCCTCCGTTCCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPLGPAA*PPFLVP
Trigger: AGGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGAAGCACCCAGTCTCTaGACGGAAGCCTCGTACACA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLEAPSL*TEASYT
Trigger: TGTGTACGAGGCTTCCGTGCAGAGACTGGGTGCTTC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGTGGGTCAATTGGCTGTaGCAGGTTCTTGTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWWVNWL*QVLVAC
Trigger: GCAGGCGACAAGAACCTGGCACAGCCAATTGACCCA...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCGATCTCAGTTGATCTaGCCGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLRSQLI*PPQPPK
Trigger: TTTGGGAGGCTGAGGCGGGCAGATCAACTGAGATCG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCTCCATCTCTTGCATCTaGTTTCCTTTGCAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVASISCI*FPLQVD
Trigger: GTCAACCTGCAAAGGAAAGCAGATGCAAGAGATGGA...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACTTCATAGCAGCGGATaGTGCAGGGGTATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDALHSSG*CRGMRG
Trigger: GCCCCTCATACCCCTGCAGCATCCGCTGCTATGAAG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACTCAGTTCACAAAGAGTaGCACTCAGCTCCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNSVHKE*HSAPGL
Trigger: AAGACCCGGAGCTGAGTGCCACTCTTTGTGAACTGA...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGAGCCGGTATCTTTCCTaGGCGCTGTTACCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWSRYLS*ALLPRL
Trigger: GAGCCTTGGTAACAGCGCCCAGGAAAGATACCGGCT...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACTTGCCCTCCGTTCCTaGTTCCTCCAGCCGGTATCT +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDALALRS*FLQPVS
Trigger: AGATACCGGCTGGAGGAACCAGGAACGGAGGGCAAG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGATGGCTCCTGTCGGTaGTACAGACATCGACTCTTA +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRDGSCR*YRHRLL
Trigger: TAAGAGTCGATGTCTGTACCACCGACAGGAGCCATC...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGGCCATGACTCCCACTaGCTTGAGCTCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPGHDSH*LELPAL
Trigger: CAGAGCAGGGAGCTCAAGCCAGTGGGAGTCATGGCC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTAGCACCGAGATCTCCTaGGTCAATTGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSTEIS*VNWLCQ
Trigger: CTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATACCAGCCCCTGGGTTaGGGACGACATGGGATGATG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAYQPLG*GRHGMM
Trigger: CATCATCCCATGTCGTCCCCAACCCAGGGGCTGGTA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCTTGCCTGTCTCTGCCTaGGTTTCACTCACTTTATAC +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVALPVSA*VSLTLY
Trigger: GTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAA...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGTCAGTGAAGCTGGCTaGAGTGGAGGAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPVSEAG*SGGVQA
Trigger: AGCCTGGACTCCTCCACTTCAGCCAGCTTCACTGAC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCATAGTAGAGGTCAGTaGAGCTGGCTGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWHSRGQ*SWLKWR
Trigger: CCTCCACTTCAGCCAGCTTCACTGACCTCTACTATG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCATAGTAGAGGTCAGTaGAGCTGGCTGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLHSRGQ*SWLKWR
Trigger: CCTCCACTTCAGCCAGCTTCACTGACCTCTACTATG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGGTTACTCAGCTGGATaGTTAATATTGCAAATTGCT +
Preference number: 4 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGGYSAG*LILQIA
Trigger: AGCAATTTGCAATATTAATCATCCAGCTGAGTAACC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCACCCAGAACACCTCATTaGACACTAGAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAPRTPH*TLECLR
Trigger: CCTCAGACACTCTAGTGTTCAATGAGGTGTTCTGGG...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAGACCTCCGCCAGGCTaGTCTGGGCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKRPPPG*SGRLPG
Trigger: GCCTGGGAGGCGCCCAGATCAGCCTGGCGGAGGTCT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCAGTTGCTGGTACTCCTaGTGTGCAAGCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSCWYS*CASSRR
Trigger: GCGCCTGGAGCTTGCACAGCAGGAGTACCAGCAACT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTGGGAGCCCAGCTTATaGTCCCAGACGGCATGCAGT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPWEPSL*SQTACS
Trigger: ACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGAGACCCCCTGTCAGTaGGGAAGCCGTCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPETPCQ*GSRPST
Trigger: TGTTGAAGGACGGCTTCCGCACTGACAGGGGGTCTC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGACAGGGACTGCATGCTaGTTGAGAGACTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRTGTAC*LRDFSA
Trigger: AGCTGAAAAGTCTCTCAAGCAGCATGCAGTCCCTGT...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACAGGACAGGGACTGCATaGTGCTTGAGAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNRTGTA*CLRDFS
Trigger: TGAAAAGTCTCTCAAGCAGCATGCAGTCCCTGTCCT...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCATGGACTTTGGGGTaGCAGACAGGGAACGCAGAG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASWTLG*QTGNAE
Trigger: CTCTGCGTTCCCTGTCTGGCACCCCAAAGTCCATGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTCGGGTCGCACCCACTaGTTCCGATTCGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSGRTH*FRFVTV
Trigger: GACAGTGACGAATCGGAAGCAGTGGGTGCGACCCGA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACGTGGGGCTCTCAAATTaGGGTGTGCATAAGACTTAC +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNVGLSN*GVHKTY
Trigger: GTAAGTCTTATGCACACCGCAATTTGAGAGCCCCAC...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGGGCGTTTACAGCTCTaGTTCATAGCAGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLGRLQL*FIAADA
Trigger: AGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAACGGCATGCAGTTGCTaGTACTCCTGCTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDATACSC*YSCCAS
Trigger: GCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACGGTCATACTTGGAGCTaGATGATGAACCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNGHTWS*MMNQRP
Trigger: TGGTCTCTGGTTCATCATCCAGCTCCAAGTATGACC...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCCGAGATGTCTGTCTaGGAGCTCACATCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAPEMSV*ELTSRY
Trigger: GTACCTGGATGTGAGCTCCCAGACAGACATCTCGGG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTTCAAGCTTGGCCAGCTaGATCTTCAGGTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSSLAS*IFRLAI
Trigger: GATCGCCAACCTGAAGATCCAGCTGGCCAAGCTTGA...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCTGCCTTCTGGGTCTTaGCCACCTCATCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPLPSGS*PPHPRG
Trigger: TCCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCCGGGGTCTCCGTGTTaGTCTCTTTGTCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLPGSPC*SLCPPL
Trigger: TAAAGGTGGACAAAGAGACCAACACGGAGACCCCGG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp AAAGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCGTTTCGAACAAAAGGTaGCTTTTTGGACAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: KGMGHLQPAWGICPVAVAVSNKR*LFGQSG
Trigger: TCCACTCTGTCCAAAAAGCCACCTTTTGTTCGAAAC...GGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCCCCATGCCTCTCCTTaGTCTAATCATGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLPHASP*SNHGSQ
Trigger: TTGGCTCCCATGATTAGACCAAGGAGAGGCATGGGG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACATAGTAGAGGTCAGTaGAGCTGGCTGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAHSRGQ*SWLKWR
Trigger: CCTCCACTTCAGCCAGCTTCACTGACCTCTACTATG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATACTTCAGGGCAATCTaGATTCGGGTCGCACCCACT +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAYFRAI*IRVAPT
Trigger: AGTGGGTGCGACCCGAATTCAGATTGCCCTGAAGTA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCCCAGAACACCTCATTaGACACTAGAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLPRTPH*TLECLR
Trigger: CCTCAGACACTCTAGTGTTCAATGAGGTGTTCTGGG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTTTCAGCATATGTTCCTaGTCCCGCCGCCATTGTACT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLFSICS*SRRHCT
Trigger: AGTACAATGGCGGCGGGAGCAGGAACATATGCTGAA...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACTTCTCCAGCTCCACTaGTGTCTGTTCCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDALLQLH*CLFQQS
Trigger: GCTCTGTTGGAACAGACAGCAGTGGAGCTGGAGAAG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCAGGTTCTTGTCGCCTaGAGGTCTAACTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPQVLVA*RSNSRS
Trigger: GGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCACATAGACTAGGCTaGTTAGCCCACCCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAPHRLG*LAHPAY
Trigger: ATAGGCTGGGTGGGCTAAGCAGCCTAGTCTATGTGG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGTCTGCAGTAGACCCTaGAAAGCTCTGAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAVCSRP*KALSWV
Trigger: TACCCAGCTCAGAGCTTTGCAGGGTCTACTGCAGAC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACCATTTTGCCTGTCTCTaGCTGGGTTTCACTCACTTT +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNHFACL*LGFTHF
Trigger: AAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATG...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGACTCACCAATAGGATaGGGGCCTCACCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDADSPIG*GPHHFA
Trigger: GGCAAAATGGTGAGGCCCGCATCCTATTGGTGAGTC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCAAGCTTGGCCAGCTaGATCTTCAGGTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASSLAS*IFRLAI
Trigger: GATCGCCAACCTGAAGATCCAGCTGGCCAAGCTTGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATGCTCCACCTCCCCCTaGGTCCACTTGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKCSTSP*VHLRGL
Trigger: CAGCCCCCGCAAGTGGACCCAGGGGGAGGTGGAGCA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGTCAGCGCCTTGCTCTaGGTGTCCCGGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKVSALL*VSRAAC
Trigger: GCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGAC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCAGCCGGTATCTTTCCTaGGCGCTGTTACCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSRYLS*ALLPRL
Trigger: GAGCCTTGGTAACAGCGCCCAGGAAAGATACCGGCT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGGGCTGGATAGGACATaGATACCCAGAACACCTCAT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLGLDRT*IPRTPH
Trigger: ATGAGGTGTTCTGGGTATCCATGTCCTATCCAGCCC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGATGGCTCCTGTCGGTaGTACAGACATCGACTCTTA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLDGSCR*YRHRLL
Trigger: TAAGAGTCGATGTCTGTACCACCGACAGGAGCCATC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAACACAGCGTCCGTGCTaGCAGGCCCTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKTQRPC*QALRQG
Trigger: CCCCTGCCTCAGGGCCTGCCAGCACGGACGCTGTGT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTATCTCCTGGGTCAATTaGCTGTGCCAGGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLISWVN*LCQVLV
Trigger: GACAAGAACCTGGCACAGCCAATTGACCCAGGAGAT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCAGCACCGAGATCTCCTaGGTCAATTGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSTEIS*VNWLCQ
Trigger: CTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCATCTGAGACCAGCGTaGCCTGTCACCCACATAGAC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPHLRPA*PVTHID
Trigger: GTCTATGTGGGTGACAGGCCACGCTGGTCTCAGATG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGCCTGAATGTGTCTGGTaGAATTCAATGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRPECVW*NSMEGE
Trigger: CTCTCCTTCCATTGAATTCCACCAGACACATTCAGG...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCACTTACAGCCAGCTTaGGGCATTTGCCCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPHLQPA*GICPVA
Trigger: AGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAATGAAGCTGGAACCATaGCCAGAGGTAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAMKLEP*PEVALG
Trigger: TCCCAAGGCTACCTCTGGCCATGGTTCCAGCTTCAT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGATTCAACTCCATCCATaGCTGGAAGAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWIQLHP*LEEGLL
Trigger: CAGCAGACCCTCTTCCAGCCATGGATGGAGTTGAAT...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAATCTCTAGGCAAACAATaGAATGTATTGGTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQSLGKQ*NVLVVC
Trigger: GCAAACCACCAATACATTCCATTGTTTGCCTAGAGA...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAATCGAAGGCGCAATCTaGCCTTCTCTGCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAIEGAI*PSLPTD
Trigger: ATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGAT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGGACTGCATGCTGCTTaGGAGACTTTTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPGLHAA*ETFQLG
Trigger: TCCCAGCTGAAAAGTCTCTCAAGCAGCATGCAGTCC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCAAACTCCAAGGAGTTaGGGAAGGCATCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPQTPRS*GRHHQP
Trigger: TGGCTGGTGATGCCTTCCTCAACTCCTTGGAGTTTG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTAAATTAGCTGTACTGTaGCAAGTGCGGGACGTCCTA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLKLAVL*QVRDVL
Trigger: TAGGACGTCCCGCACTTGTCACAGTACAGCTAATTT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATGGGTGGGAAAGAAATaGCTGGAAAGGGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAWVGKK*LERGES
Trigger: TGACTCTCCCCTTTCCAGTCATTTCTTTCCCACCCA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGGGGACGACATGGGATaGTGCTCATATGAACAAACT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLGDDMG*CSYEQT
Trigger: AGTTTGTTCATATGAGCATCATCCCATGTCGTCCCC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCATGGTGCAACAGACTTTaGGAAAAGTTGCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAWCNRL*EKLHRV
Trigger: TACCCTGTGCAACTTTTCTCAAAGTCTGTTGCACCA...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGTGTCCCGGGCTGCCTaGAGGTCCTTTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKVSRAA*RSFSSR
Trigger: GCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACAC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATCTCCGTCAGCGCCTTaGTCTGGGTGTCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKSPSAP*SGCPGL
Trigger: CAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGGAACAGGCAGGTTGTaGTTTCAGAGCAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAGTGRL*FQSKEG
Trigger: TCCTTCCTTGCTCTGAAAGCACAACCTGCCTGTTCC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCCTCACTGTCAAGCTTaGCCAGCTGGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPPHCQA*PAGSSG
Trigger: ACCTGAAGATCCAGCTGGCCAAGCTTGACAGTGAGG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGGTCAGCGCCTTGCTCTaGGTGTCCCGGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVVSALL*VSRAAC
Trigger: GCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGAC...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGAGAGACTTTTCAGCTaGGAGTGCAGAGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPERLFS*ECRVAT
Trigger: GGTGGCAACTCTGCACTCCCAGCTGAAAAGTCTCTC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCCGGGGTCTCCGTGTTaGTCTCTTTGTCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPPGSPC*SLCPPL
Trigger: TAAAGGTGGACAAAGAGACCAACACGGAGACCCCGG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAGCCGGCACACGTACTaGCTCTGGGGTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKSRHTY*LWGPGE
Trigger: CTCCCCAGGACCCCAGAGCCAGTACGTGTGCCGGCT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGCTTTTTGGACAGAGTaGAGCTGTCACTATCACTCC +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLAFWTE*SCHYHS
Trigger: GGAGTGATAGTGACAGCTCCACTCTGTCCAAAAAGC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAATCTCCTGGGTCAATTaGCTGTGCCAGGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAISWVN*LCQVLV
Trigger: GACAAGAACCTGGCACAGCCAATTGACCCAGGAGAT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGAAAGACTGAACTTCTaGGGGTTCCTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLERLNF*GFLTAL
Trigger: CAGAGCTGTAAGGAACCCCCAGAAGTTCAGTCTTTC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGGAAGTCATCTCTCTCTaGGTGGGGTGGAATTCCATA +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWEVISL*VGWNSI
Trigger: TATGGAATTCCACCCCACCCAGAGAGAGATGACTTC...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCTTACAGAGGGAACATaGGTAAAACACTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWLTEGT*VKHWHW
Trigger: CCAGTGCCAGTGTTTTACCCATGTTCCCTCTGTAAG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCTCACTTTATACCAGTaGGGCTCTCAAATTGCGGTG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLLTLYQ*GSQIAV
Trigger: CACCGCAATTTGAGAGCCCCACTGGTATAAAGTGAG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACAACCCTGAATGTGTCTaGTGGAATTCAATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SVGTGATEQHETILVLYNNPECV*WNSMEG
Trigger: TCCTTCCATTGAATTCCACCAGACACATTCAGGGTT...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
3UTR CAA 72 bp AAGGAGACAGTACAGAGAGCATATCCCCAGTCTAACTaGGGGATGTGGATTCCCAATGAGCCGAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KETVQRAYPQSN*GMWIPNEPSSH
Trigger: ATGACTGCTCGGCTCATTGGGAATCCACATCCCCAAGTTAGACTGGGGATATGCTCTCTGTACTGTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTTGGTGTTGTGGTCTATaGAGTAATCTCCAACCTGTG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLWCCGL*SNLQPV
Trigger: CACAGGTTGGAGATTACTTCATAGACCACAACACCA...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGACCACAGGTCTGAGTaGGACCCCCTGTCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKDHRSE*DPLSVR
Trigger: CCGCACTGACAGGGGGTCTCACTCAGACCTGTGGTC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCATCATCTTGTCTGTCTaGAGCTCACCCTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPIILSV*SSPLCS
Trigger: GGAGCACAAGGGTGAGCTTCAGACAGACAAGATGAT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAAAATTAGCTGTACTGTaGCAAGTGCGGGACGTCCTA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAKLAVL*QVRDVL
Trigger: TAGGACGTCCCGCACTTGTCACAGTACAGCTAATTT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGATGATGCTCATATaGACAAACTGTGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAGMMLI*TNCEVI
Trigger: GATGACTTCACAGTTTGTTCATATGAGCATCATCCC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCCTTGCTGGGACAACTaGGCACAGATGAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPPCWDN*AQMNVS
Trigger: TGACACATTCATCTGTGCTCAGTTGTCCCAGCAAGG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGTTGACCCGGGATTTTaGAGTGGCAATTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLVDPGF*SGNFSF
Trigger: AAAGCTGAAATTGCCACTGCAAAATCCCGGGTCAAC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACTGGGTGTCCCGGGCTaGCTGCAGGTCCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKLGVPG*LQVLFQ
Trigger: CTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGAGGGAACGCAGAGCCTaGAGGCGGCCACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVRERRA*RRPPPS
Trigger: AGAGGGAGGTGGCCGCCTGCAGGCTCTGCGTTCCCT...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACCCAGCCTATCACACTaGCCGCTCCACGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKPSLSH*PLHVGQ
Trigger: CTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCCGGGATTTTGCAGTaGCAATTTCAGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAPGILQ*QFQLSG
Trigger: TCCTGAAAGCTGAAATTGCCACTGCAAAATCCCGGG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCAAGTATTTGTAGCTaGGAAGGTTGTACCAGCGAG +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASSICS*EGCTSE
Trigger: CTCGCTGGTACAACCTTCTCAGCTACAAATACTTGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGAGAACATCAGAGATTaGTGTGTTCAGAGACGTGAA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLENIRD*CVQRRE
Trigger: TTCACGTCTCTGAACACATCAATCTCTGATGTTCTC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGGGAAGGTGTTGATTaGTACTCATATGAAGACATT +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAGEGVD*YSYEDI
Trigger: AATGTCTTCATATGAGTATCAATCAACACCTTCCCC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLQSDLL*QLIVAV
Trigger: AACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATGCAGAGTTGCCACCTaGCGGGTGGCTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKCRVAT*RVASSS
Trigger: ACTGGAGGAAGCCACCCGGCAGGTGGCAACTCTGCA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCACAGGGACTGCATGCTaGTTGAGAGACTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPTGTAC*LRDFSA
Trigger: AGCTGAAAAGTCTCTCAAGCAGCATGCAGTCCCTGT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACTTGGCCCAGCTGCTTaGCCTCCGTTCCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKLGPAA*PPFLVP
Trigger: AGGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAACAGCTTGGCCCAGCTaGTTGCCCTCCGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKTAWPS*LPSVPG
Trigger: ACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGCTGT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGCTTCATCCGGACGCTaGGTCGCTCCAGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKASSGR*VAPGSF
Trigger: GAAACTCCCTGGAGCGACGCAGCGTCCGGATGAAGC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCGGATATTCACTTTCTaGTCTTGTTGCTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLRIFTF*SCCCNR
Trigger: TCTGTTGCAGCAACAAGACCAGAAAGTGAATATCCG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGGCCATGACTCCCACTaGCTTGAGCTCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKGHDSH*LELPAL
Trigger: CAGAGCAGGGAGCTCAAGCCAGTGGGAGTCATGGCC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGCTTTTTGGACAGAGTaGAGCTGTCACTATCACTCC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPAFWTE*SCHYHS
Trigger: GGAGTGATAGTGACAGCTCCACTCTGTCCAAAAAGC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCCAAAAGGTGGCTTTTTaGACAGAGTGGAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPQKVAF*TEWSCH
Trigger: GTGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTG...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACTCACGCAACCACTGTaGCAGCTCCTTCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKLTQPL*QLLLPV
Trigger: CACGGGGAGAAGGAGCTGCCACAGTGGTTGCGTGAG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGTCAGTGAAGCTGGCTaGAGTGGAGGAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKVSEAG*SGGVQA
Trigger: AGCCTGGACTCCTCCACTTCAGCCAGCTTCACTGAC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACTTGCTCTGCAGCTCTaGGTCCAGCTGCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKLALQL*VQLLKG
Trigger: CCCTTTGAGCAGCTGGACTCAGAGCTGCAGAGCAAG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGTTACTCAGCTGGATaGTTAATATTGCAAATTGCT +
Preference number: 4 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAGYSAG*LILQIA
Trigger: AGCAATTTGCAATATTAATCATCCAGCTGAGTAACC...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACCAGCTTGGGGCATTTaGCCCGTTGCTGTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKPAWGI*PVAVAN
Trigger: ATTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACCAGAGAGCTGCTGCTaGACCACAGGTCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKPESCC*TTGLSE
Trigger: CTCACTCAGACCTGTGGTCCAGCAGCAGCTCTCTGG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGGAGGTCATGGACTTTaGGGTGCCAGACAGGGAACG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKGGHGL*GARQGT
Trigger: CGTTCCCTGTCTGGCACCCCAAAGTCCATGACCTCC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACGGATATTCACTTTCTaGTCTTGTTGCTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDARIFTF*SCCCNR
Trigger: TCTGTTGCAGCAACAAGACCAGAAAGTGAATATCCG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGTTTCGAACAAAAGGTaGCTTTTTGGACAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAVSNKR*LFGQSG
Trigger: TCCACTCTGTCCAAAAAGCCACCTTTTGTTCGAAAC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAGCTCCTTCTCCCCGTaGCTCTTGGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKSSFSP*LLACSS
Trigger: GCTGGAACAAGCCAAGAGCCACGGGGAGAAGGAGCT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGGTTCCTTACAGCTCTaGCCTCGGAGCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKGSLQL*PRSLCT
Trigger: TGTGCACAGGCTCCGAGGCCAGAGCTGTAAGGAACC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATCCGCAGAGGTGGTCTaGTTCTCCCCACAAATGCCC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKSAEVV*FSPQMP
Trigger: GGGCATTTGTGGGGAGAACCAGACCACCTCTGCGGA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAACCAGAGACCAAGCTaGCCTGGGAGCCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKNQRPS*PGSPAY
Trigger: ATAAGCTGGGCTCCCAGGTCAGCTTGGTCTCTGGTT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGAGGAAGATTCTTTTTaGAAGGCCACTTTATTGATG +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLEEDSF*KATLLM
Trigger: CATCAATAAAGTGGCCTTTCAAAAAGAATCTTCCTC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCTATTTGTTAGAAACTaGCTTCTGATTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VTSAGRPIRITVPQALLLLFVRN*LLIVCS
Trigger: ACTGCAGACAATCAGAAGTCAGTTTCTAACAAATAG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTTGGTGGTTTGCTGGTaGACCGTTTATAGAGAATTC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPLVVCW*TVYREF
Trigger: GAATTCTCTATAAACGGTTCACCAGCAAACCACCAA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATCTCCAGAGAGCTGCTaGTGGACCACAGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKSPESC*WTTGLS
Trigger: ACTCAGACCTGTGGTCCAGCAGCAGCTCTCTGGAGA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACAGGTTCTTGTCGCCTaGAGGTCTAACTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKQVLVA*RSNSRS
Trigger: GGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATGGGTCAATTGGCTGTaGCAGGTTCTTGTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKWVNWL*QVLVAC
Trigger: GCAGGCGACAAGAACCTGGCACAGCCAATTGACCCA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGGAGTGTAGGCACAGGTaGCACAGAGCAGCACGAGAC +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVECRHR*HRAARD
Trigger: GTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTC...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGTGGAAGAGGGTCTGCTaGCTTCCGCAGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVWKRVC*LPQRWS
Trigger: AGACCACCTCTGCGGAAGGCAGCAGACCCTCTTCCA...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAACGGCATGCAGTTGCTaGTACTCCTGCTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKTACSC*YSCCAS
Trigger: GCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGGGATAGGGAGGTCATaGACTTTGGGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKGIGRS*TLGCQT
Trigger: TGTCTGGCACCCCAAAGTCCATGACCTCCCTATCCC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAGGCACTCTTCCAGATaGCTCCTGTCGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKRHSSR*LLSVVQ
Trigger: CTGTACCACCGACAGGAGCCATCTGGAAGAGTGCCT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATACTTCAGGGCAATCTaGATTCGGGTCGCACCCACT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKYFRAI*IRVAPT
Trigger: AGTGGGTGCGACCCGAATTCAGATTGCCCTGAAGTA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR GCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGCTATGTAGTAGACCTTaGCGTCGAAGTCGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVLCSRP*RRSRAP
Trigger: AGGCGCGCGACTTCGACGGCAAGGTCTACTACATAG...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACCTGAGGACAGGGACTaGATGCTGCTTGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKPEDRD*MLLERL
Trigger: AAGTCTCTCAAGCAGCATGCAGTCCCTGTCCTCAGG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CCA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAAAGACCTCTAAAAGGTaGAGCTGTACAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAKTSKR*SCTNQK
Trigger: TTTTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGTCTGAATGGCTCAGCTaGACCCCATGCCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVSEWLS*TPCLSL
Trigger: CAAGGAGAGGCATGGGGTCCAGCTGAGCCATTCAGA...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTTTATTGAGTCCAAATaGACTGCAGATACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPFIESK*TADTVR
Trigger: CCTCACTGTATCTGCAGTCCATTTGGACTCAATAAA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAACTGATTGTTGCTGTTaGTGCCGAAGCTTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKTDCCC*CRSFPR
Trigger: TCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAACCTTCTCTGCCAACTaGTTGTTGCTGTTGATGCCG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKTFSAN*LLLLMP
Trigger: CGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAATCATCTTGTCTGTCTaGAGCTCACCCTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKIILSV*SSPLCS
Trigger: GGAGCACAAGGGTGAGCTTCAGACAGACAAGATGAT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAATGCCATCTTCTCCCTaGAAGACTGAACTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKMPSSP*KTELLG
Trigger: CCCCAGAAGTTCAGTCTTTCAGGGAGAAGATGGCAT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR GCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGAGATTTGTGGCTGTTaGTATTTGTTAGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPEICGC*YLLETD
Trigger: GTCAGTTTCTAACAAATAGCAACAGCCACAAATCTC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAATCTCCTGGGTCAATTaGCTGTGCCAGGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKISWVN*LCQVLV
Trigger: GACAAGAACCTGGCACAGCCAATTGACCCAGGAGAT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCAAGACCTCTAAAAGGTaGAGCTGTACAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPKTSKR*SCTNQK
Trigger: TTTTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTT...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGAGGAATGGTTCTGAATaGCTCAGCTGGACCCCATGC +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVRNGSE*LSWTPC
Trigger: GCATGGGGTCCAGCTGAGCCATTCAGAACCATTCCT...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGATCGAAGGCGCAATCTaGCCTTCTCTGCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVIEGAI*PSLPTD
Trigger: ATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGAT...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATTCTCCCTGAAAGACTaGACTTCTGGGGGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKFSLKD*TSGGSL
Trigger: TAAGGAACCCCCAGAAGTTCAGTCTTTCAGGGAGAA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAAATTAGCTGTACTGTaGCAAGTGCGGGACGTCCTA +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKKLAVL*QVRDVL
Trigger: TAGGACGTCCCGCACTTGTCACAGTACAGCTAATTT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGGTCATACTTGGAGCTaGATGATGAACCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKGHTWS*MMNQRP
Trigger: TGGTCTCTGGTTCATCATCCAGCTCCAAGTATGACC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGAAAGACTGAACTTCTaGGGGTTCCTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKERLNF*GFLTAL
Trigger: CAGAGCTGTAAGGAACCCCCAGAAGTTCAGTCTTTC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
3UTR CAA 72 bp GACCATCCTTGTGCTCTACAACCTAGTACAATTGAGTaGGGGAAGGTGTTGATTGATACTCATATGAAGACA +
Preference number: 4 (lower is better)
Translates to: DHPCALQPSTIE*GKVLIDTHMKT
Trigger: TGTCTTCATATGAGTATCAATCAACACCTTCCCCAACTCAATTGTACTAGGTTGTAGAGCACAAGGATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGTTGACCCGGGATTTTaGAGTGGCAATTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKVDPGF*SGNFSF
Trigger: AAAGCTGAAATTGCCACTGCAAAATCCCGGGTCAAC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR GCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAACTTTCTGGTCTTGTTaGTGCAACAGAGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKTFWSC*CNRAER
Trigger: CCTTTCTGCTCTGTTGCAGCAACAAGACCAGAAAGT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR TCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATTACGAAGTAAACCCTaGATGTGTCTGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKLRSKP*MCLVEF
Trigger: GAATTCCACCAGACACATTCAGGGTTTACTTCGTAA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR TCA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGTTAGAAACTGACTTCTaGTTGTCTGCAGTAGACCCT +
Preference number: 4 (lower is better)
Translates to: THVTFKVFIESKWTADTVLETDF*LSAVDP
Trigger: AGGGTCTACTGCAGACAATCAGAAGTCAGTTTCTAA...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAATGGAATGTATTGGTaGTTTGCTGGTGAACCGTTT +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKNGMYW*FAGEPF
Trigger: AAACGGTTCACCAGCAAACCACCAATACATTCCATT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CCA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAAGACCTCTAAAAGGTaGAGCTGTACAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKKTSKR*SCTNQK
Trigger: TTTTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS TCA 90 bp CCTCCCTGCAGCCGGGTGCCGTCCCTCCTCTCCGCTCCACCGCTCTaGGCTCGCCGGGTTTGTGACTTCTGCCTCCGCCAGGTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PPCSRVPSLLSAPPL*ARRVCDFCLRQVRL
Trigger: GAGCCGCACCTGGCGGAGGCAGAAGTCACAAACCCGGCGAGCTCAGAGCGGTGGAGCGGAGAGGAGGGACGGCACCCGGCTGCAGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS TCA 90 bp GCCGTCCCTCCTCTCCGCTCCACCGCTCTGAGCTCGCCGGGTTTGTaGCTTCTGCCTCCGCCAGGTGCGGCTCGGGCGGTGCAGGTAACC +
Preference number: 5 (lower is better)
Translates to: AVPPLRSTALSSPGL*LLPPPGAARAVQVT
Trigger: GGTTACCTGCACCGCCCGAGCCGCACCTGGCGGAGGCAGAAGTCACAAACCCGGCGAGCTCAGAGCGGTGGAGCGGAGAGGAGGGACGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS GCA 90 bp CCCCACCTCTCCGTCAGCGCCTTGCTCTGGGTGTCCCGGGCTGCCTaGAGGTCCTTTTCCAGCCGCTTCCGGGCCATCTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PHLSVSALLWVSRAA*RSFSSRFRAISSCS
Trigger: GGAGCAGCTGGAGATGGCCCGGAAGCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGAGGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 90 bp CCAGCCCCACCTCTCCGTCAGCGCCTTGCTCTGGGTGTCCCGGGCTaGCTGCAGGTCCTTTTCCAGCCGCTTCCGGGCCATCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PAPPLRQRLALGVPG*LQVLFQPLPGHLQL
Trigger: CAGCTGGAGATGGCCCGGAAGCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGAGGTGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 90 bp CGGCCACCTCCCTCTGCCTTCTGGGTCTTGGCCACCTCATCCTCGTaGATGGTGGTGATGCAGCCTGAGGGCCGGAAGCCGGTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: RPPPSAFWVLATSSS*MVVMQPEGRKPVAP
Trigger: GGGGGCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACCATCCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAGAGGGAGGTGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS TCA 90 bp CCAGGTCCAGCGAGGTACGGATCAGACGCTCGGAGCGCAGCGACTTaGCCGAGGAAGGCTGTGGGGGTGGGGACGGCCGCTTCATCCGGA +
Preference number: 5 (lower is better)
Translates to: PGPARYGSDARSAAT*PRKAVGVGTAASSG
Trigger: TCCGGATGAAGCGGCCGTCCCCACCCCCACAGCCTTCCTCGGTCAAGTCGCTGCGCTCCGAGCGTCTGATCCGTACCTCGCTGGACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
CDS TCA 90 bp CCTCTGCCTTCTGGGTCTTGGCCACCTCATCCTCGTGGATGGTGGTaGTGCAGCCTGAGGGCCGGAAGCCGGTGGCCCCCTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: PLPSGSWPPHPRGWW*CSLRAGSRWPPPGA
Trigger: TGCTCCTGGAGGGGGCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACCATCCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS TCA 90 bp AGCAGACACAGCGTCCTGGTCCCAGCTCACCGTGCTGGCAGGCCCTaGGGCAGGGGCCATGACTCCCACTGGCTTGAGCTCCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SRHSVLVPAHRAGRP*GRGHDSHWLELPAL
Trigger: CAGAGCAGGGAGCTCAAGCCAGTGGGAGTCATGGCCCCTGCCTCAGGGCCTGCCAGCACGGTGAGCTGGGACCAGGACGCTGTGTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522140.1
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATCCCCCTGGGTCCACTaGCGGGGGCTGATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSPWVH*RGLMKR
Trigger: GCGCTTCATCAGCCCCCGCAAGTGGACCCAGGGGGA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTCTCCGTCAGCGCCTaGCTCTGGGTGTCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSLSVSA*LWVSRA
Trigger: AGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGAG...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTCCCCCTGGGTCCACTaGCGGGGGCTGATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSPWVH*RGLMKR
Trigger: GCGCTTCATCAGCCCCCGCAAGTGGACCCAGGGGGA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGCTGGGAGTGCAGAGTaGCCACCTGCCGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSAGSAE*PPAGWL
Trigger: AAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAGC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGCTTGGCCCAGCTGCTaGCCCTCCGTTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSAWPSC*PSVPGS
Trigger: GGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTCGGAGCGCAGCGACTaGACCGAGGAAGGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSERSD*TEEGRF
Trigger: GAAGCGGCCTTCCTCGGTCAAGTCGCTGCGCTCCGA...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATCGGAGCGCAGCGACTaGACCGAGGAAGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSERSD*TEEGCG
Trigger: CCCACAGCCTTCCTCGGTCAAGTCGCTGCGCTCCGA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393895.7
ENST00000524038.5
CDS GCA 90 bp TTTAACCTCTCCGTCAGCGCCTTGCTCTGGGTGTCCCGGGCTGCCTaGAGGTCCTTTTCCAGCCGCTTCCGGGCCATCTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FNLSVSALLWVSRAA*RSFSSRFRAISSCS
Trigger: GGAGCAGCTGGAGATGGCCCGGAAGCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGAGGTTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000518334.1
ENST00000521089.5
ENST00000524228.5
CDS GCA 90 bp AGGGAGGTCATGGACTTTGGGGTGCCAGACAGGGAACGCAGAGCCTaGAGGCGGCCACCTCCCTCTGCCTTCTGGGTCTTGGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: REVMDFGVPDRERRA*RRPPPSAFWVLATS
Trigger: TGAGGTGGCCAAGACCCAGAAGGCAGAGGGAGGTGGCCGCCTGCAGGCTCTGCGTTCCCTGTCTGGCACCCCAAAGTCCATGACCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGGCCGTATTCACAGCTaGGCCCAGCTGCTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPGRIHS*AQLLAL
Trigger: GAGGGCAAGCAGCTGGGCCAAGCTGTGAATACGGCC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGCCAGCTTGGGGCATTaGCCCCGTTGCTGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPASLGH*PRCCGQ
Trigger: TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTCGGAGCGCAGCGACTaGACCGAGGAAGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSERSD*TEEGCG
Trigger: CCCACAGCCTTCCTCGGTCAAGTCGCTGCGCTCCGA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393895.7
ENST00000524038.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGGGAGGTCATGGACTTaGGGGTGCCAGACAGGGAAC +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPGRSWT*GCQTGN
Trigger: GTTCCCTGTCTGGCACCCCAAAGTCCATGACCTCCC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCGGCTGTGCCAGGTTCTaGTCGCCTGCAGGTCTAACT +
Preference number: 5 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGGCARF*SPAGLT
Trigger: AGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCC...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACCCGTGGCTCTTGGCTaGTTCCAGCTGCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPPVALG*FQLLLE
Trigger: CTCAAGGAGCAGCTGGAACAAGCCAAGAGCCACGGG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCATTCTCCCCGTGGCTCTaGGCTTGTTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPFSPWL*ACSSCS
Trigger: GGAGCAGCTGGAACAAGCCAAGAGCCACGGGGAGAA...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCAGCCTGTGCACATCCTaGGCAGCTGCCCTCATCATC +
Preference number: 5 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGSLCTS*AAALII
Trigger: GATGATGAGGGCAGCTGCCAAGGATGTGCACAGGCT...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGGGGCATTTGCCCCGTaGCTGTGGCCAATGCCCTTA +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSGAFAP*LWPMPL
Trigger: TAAGGGCATTGGCCACAGCAACGGGGCAAATGCCCC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS TCA 90 bp TTGTGCTCCGCTCGGTCCATCTGCTGGGCAAAGCAAGCAAGGCCCTaGGTCAGTGGAGGGGGCCTCCAGAAAGGGGCAAGGAGAACTCGC +
Preference number: 5 (lower is better)
Translates to: LCSARSICWAKQARP*VSGGGLQKGARRTR
Trigger: GCGAGTTCTCCTTGCCCCTTTCTGGAGGCCCCCTCCACTGACTCAGGGCCTTGCTTGCTTTGCCCAGCAGATGGACCGAGCGGAGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518204.1
CDS GCA 90 bp GAGACCAAGCTGACCTGGGAGCCCAGCTTATGCTCCCAGACGGCATaGAGTTGCTGGTACTCCTGCTGTGCAAGCTCCAGGCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ETKLTWEPSLCSQTA*SCWYSCCASSRRCC
Trigger: GCAGCAGCGCCTGGAGCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCAGGTCAGCTTGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000519859.1
ENST00000521089.5
ENST00000523043.5
CDS GCA 90 bp AGGGCCGGAAGCCGGTGGCCCCCTCCAGGAGCAGGAACTCCACCTTaGTCTGCAGCTCTGAGTCCAGCTGCTCAAAGGGGTCATAGTAGA +
Preference number: 5 (lower is better)
Translates to: RAGSRWPPPGAGTPP*SAALSPAAQRGHSR
Trigger: TCTACTATGACCCCTTTGAGCAGCTGGACTCAGAGCTGCAGAGCAAGGTGGAGTTCCTGCTCCTGGAGGGGGCCACCGGCTTCCGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS-3UTR CAA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAGCAAAGGTGAGCGGTTaGGTGTACCTGTCCCGCGGG +
Preference number: 5 (lower is better)
Translates to: SAASEGGTTPSITAHGFPAKVSG*VYLSRG
Trigger: CCCGCGGGACAGGTACACCAAACCGCTCACCTTTGC...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGCCTCACTGTCAAGCTaGGCCAGCTGGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPASLSS*ASWIFR
Trigger: CCTGAAGATCCAGCTGGCCAAGCTTGACAGTGAGGC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCAGCTCCTCCTTCTCGTaGATAAGGATCAGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGSSSFS*IRISRS
Trigger: GGACCGGCTGATCCTTATCAACGAGAAGGAGGAGCT...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGCAGGAACTCCACCTaGCTCTGCAGCTCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSRNST*LCSSES
Trigger: GGACTCAGAGCTGCAGAGCAAGGTGGAGTTCCTGCT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAAGCAGGAACTCCACCTaGCTCTGCAGCTCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSRNST*LCSSES
Trigger: GGACTCAGAGCTGCAGAGCAAGGTGGAGTTCCTGCT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTCTGCCTTCTGGGTCTaGGCCACCTCATCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSAFWV*ATSSSW
Trigger: CCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAGA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGCCGGGGTCTCCGTGTaGGTCTCTTTGTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPAGVSV*VSLSTF
Trigger: AAAGGTGGACAAAGAGACCAACACGGAGACCCCGGC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGGCTGTGCCAGGTTCTaGTCGCCTGCAGGTCTAACT +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPGCARF*SPAGLT
Trigger: AGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCGGCTGTGCCAGGTTCTaGTCGCCTGCAGGTCTAACT +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSGCARF*SPAGLT
Trigger: AGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCC...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTTCTCCCCGTGGCTCTaGGCTTGTTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGFSPWL*ACSSCS
Trigger: GGAGCAGCTGGAACAAGCCAAGAGCCACGGGGAGAA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS CCA 90 bp CTGGGCCGTATTCACAGCTTGGCCCAGCTGCTTGCCCTCCGTTCCTaGTTCCTCCAGCCGGTATCTTTCCTGGGCGCTGTTACCAAGGCT +
Preference number: 5 (lower is better)
Translates to: LGRIHSLAQLLALRS*FLQPVSFLGAVTKA
Trigger: AGCCTTGGTAACAGCGCCCAGGAAAGATACCGGCTGGAGGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGCTGTGAATACGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS CCA 90 bp AAGGTCTTAGAGCGGATGATGGTGCTCCCTCGAAGAAATGGCCCCTaGGACGGGGTGCCCACTCTCCGGTCCTTAGGTCGCACCACTGTG +
Preference number: 5 (lower is better)
Translates to: KVLERMMVLPRRNGP*DGVPTLRSLGRTTV
Trigger: CACAGTGGTGCGACCTAAGGACCGGAGAGTGGGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGCACCATCATCCGCTCTAAGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCCTGCTCCCGCCGCCATaGTACTCGAGGATCCTCAAT +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGLLPPP*YSRILN
Trigger: ATTGAGGATCCTCGAGTACAATGGCGGCGGGAGCAG...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGCCTCACTGTCAAGCTaGGCCAGCTGGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGASLSS*ASWIFR
Trigger: CCTGAAGATCCAGCTGGCCAAGCTTGACAGTGAGGC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGTCCCCCTGGGTCCACTaGCGGGGGCTGATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRSPWVH*RGLMKR
Trigger: GCGCTTCATCAGCCCCCGCAAGTGGACCCAGGGGGA...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAGGGACTGCATGCTGCTaGAGAGACTTTTCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPGTACC*RDFSAG
Trigger: CCCAGCTGAAAAGTCTCTCAAGCAGCATGCAGTCCC...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGGAACTCCACCTaGCTCTGCAGCTCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSRNST*LCSSES
Trigger: GGACTCAGAGCTGCAGAGCAAGGTGGAGTTCCTGCT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCTGTGCACATCCTaGGCAGCTGCCCTCATCATC +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSLCTS*AAALII
Trigger: GATGATGAGGGCAGCTGCCAAGGATGTGCACAGGCT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCACTGCCCGCTCCACGTaGGGCAGCCACATAAAAACA +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSTARST*GSHIKT
Trigger: TGTTTTTATGTGGCTGCCCAACGTGGAGCGGGCAGT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCAGCGGGCCTCACCATTTaGCCTGTCTCTGCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SAASEGGTTPSITAHGFPAGLTI*PVSAWV
Trigger: AACCCAGGCAGAGACAGGCAAAATGGTGAGGCCCGC...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS CCA 90 bp CGCTCGGTCCATCTGCTGGGCAAAGCAAGCAAGGCCCTGAGTCAGTaGAGGGGGCCTCCAGAAAGGGGCAAGGAGAACTCGCTATCACAA +
Preference number: 5 (lower is better)
Translates to: RSVHLLGKASKALSQ*RGPPERGKENSLSQ
Trigger: TTGTGATAGCGAGTTCTCCTTGCCCCTTTCTGGAGGCCCCCTCCACTGACTCAGGGCCTTGCTTGCTTTGCCCAGCAGATGGACCGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518204.1
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCACTGGTAGATCTCCTTTaGTGCACTCAGAGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPLVDLL*CTQSLL
Trigger: CAGGAGGCTCTGAGTGCACAAAAGGAGATCTACCAG...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAAGCTGGATCTTCAGGTaGGCGATCCTTCTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPSWIFR*AILLLA
Trigger: GGCTAAGAGAAGGATCGCCAACCTGAAGATCCAGCT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCAGCTGGATCTTCAGGTaGGCGATCCTTCTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: LGCLAHPAYHTARSTLGSSWIFR*AILLLA
Trigger: GGCTAAGAGAAGGATCGCCAACCTGAAGATCCAGCT...GCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCACTGCCCGCTCCACGTaGGGCAGCCACATAAAAACA +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGTARST*GSHIKT
Trigger: TGTTTTTATGTGGCTGCCCAACGTGGAGCGGGCAGT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS GCA 90 bp GGTACTGTTTCGGTAGCGGGAAACTCGAACTCTCCAGAGAGCTGCTaGTGGACCACAGGTCTGAGTGAGACCCCCTGTCAGTGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: GTVSVAGNSNSPESC*WTTGLSETPCQCGS
Trigger: GCTTCCGCACTGACAGGGGGTCTCACTCAGACCTGTGGTCCAGCAGCAGCTCTCTGGAGAGTTCGAGTTTCCCGCTACCGAAACAGTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS GCA 90 bp CCAGGTACTGTTTCGGTAGCGGGAAACTCGAACTCTCCAGAGAGCTaGTGCTGGACCACAGGTCTGAGTGAGACCCCCTGTCAGTGCGGA +
Preference number: 5 (lower is better)
Translates to: PGTVSVAGNSNSPES*CWTTGLSETPCQCG
Trigger: TCCGCACTGACAGGGGGTCTCACTCAGACCTGTGGTCCAGCAGCAGCTCTCTGGAGAGTTCGAGTTTCCCGCTACCGAAACAGTACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS GCA 90 bp ACCGAGATCTCCTGGGTCAATTGGCTGTGCCAGGTTCTTGTCGCCTaGAGGTCTAACTCCAGGTCCAGCGAGGTACGGATCAGACGCTCG +
Preference number: 5 (lower is better)
Translates to: TEISWVNWLCQVLVA*RSNSRSSEVRIRRS
Trigger: CGAGCGTCTGATCCGTACCTCGCTGGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCCAATTGACCCAGGAGATCTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS GCA 90 bp GAGAGCTGCTGCTGGACCACAGGTCTGAGTGAGACCCCCTGTCAGTaGGGAAGCCGTCCTTCAACATGGCAAGGCTTTCTTCAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: ESCCWTTGLSETPCQ*GSRPSTWQGFLQGL
Trigger: CAGACCCTGAAGAAAGCCTTGCCATGTTGAAGGACGGCTTCCGCACTGACAGGGGGTCTCACTCAGACCTGTGGTCCAGCAGCAGCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523043.5
CDS GCA 90 bp GGGAGGCCAGGCAAGAACTTGGGGAACCCGATCCACCTGGCACCATaGCATGTGCAAGTGGGGCCTACTCAGTTGCTAGAATGGTACTGC +
Preference number: 5 (lower is better)
Translates to: GRPGKNLGNPIHLAP*HVQVGPTQLLEWYC
Trigger: GCAGTACCATTCTAGCAACTGAGTAGGCCCCACTTGCACATGGCATGGTGCCAGGTGGATCGGGTTCCCCAAGTTCTTGCCTGGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 90 bp ACTGTTTCGGTAGCGGGAAACTCGAACTCTCCAGAGAGCTGCTGCTaGACCACAGGTCTGAGTGAGACCCCCTGTCAGTGCGGAAGCCGT +
Preference number: 5 (lower is better)
Translates to: TVSVAGNSNSPESCC*TTGLSETPCQCGSR
Trigger: ACGGCTTCCGCACTGACAGGGGGTCTCACTCAGACCTGTGGTCCAGCAGCAGCTCTCTGGAGAGTTCGAGTTTCCCGCTACCGAAACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS CCA 90 bp GGAGAGATTCCTACCATCGATGAGTCAAGGGGGTCTCTGAAGCCATaGGAGGCCAGGCAAGAACTTGGGGAACCCGATCCACCTGGCACC +
Preference number: 5 (lower is better)
Translates to: GEIPTIDESRGSLKP*EARQELGEPDPPGT
Trigger: GGTGCCAGGTGGATCGGGTTCCCCAAGTTCTTGCCTGGCCTCCCATGGCTTCAGAGACCCCCTTGACTCATCGATGGTAGGAATCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS-3UTR CAA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCATCTCTCTCTTCAGCTaGTTGACCCGGGATTTTGCA +
Preference number: 5 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGISLFS*LTRDFA
Trigger: TGCAAAATCCCGGGTCAACAAGCTGAAGAGAGAGAT...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCTGGATCTTCAGGTaGGCGATCCTTCTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSWIFR*AILLLA
Trigger: GGCTAAGAGAAGGATCGCCAACCTGAAGATCCAGCT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTCAAACTCCAAGGAGTaGAGGAAGGCATCACCAGCC +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSNSKE*RKASPA
Trigger: GGCTGGTGATGCCTTCCTCAACTCCTTGGAGTTTGA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTCCGGAACAGGCAGGTaGTGCTTTCAGAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSGTGR*CFQSKE
Trigger: TTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCACAAAAGGTGGCTTTTaGGACAGAGTGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGTKGGF*DRVELS
Trigger: TGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTGT...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCGATCTCCTGGGTCAATaGGCTGTGCCAGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGDLLGQ*AVPGSC
Trigger: ACAAGAACCTGGCACAGCCAATTGACCCAGGAGATC...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GACGTGAAGCCACGGGGCAGGAGGAAGCCCTGGGCCAGTGGTGAGAAATCGGGCTTCAGGCAGGAGGATTaGCTCCATGTAGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: DVKPRGRRKPWASGEKSGFRQED*LHVAFP
Trigger: AGGAAAAGCTACATGGAGCAAATCCTCCTGCCTGAA...GCCCGATTTCTCACCACTGGCCCAGGGCTTCCTCCTGCCCCGTGGCTTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS GCA 90 bp CTGGATGATGAACCAGAGACCAAGCTGACCTGGGAGCCCAGCTTATaGTCCCAGACGGCATGCAGTTGCTGGTACTCCTGCTGTGCAAGC +
Preference number: 5 (lower is better)
Translates to: LDDEPETKLTWEPSL*SQTACSCWYSCCAS
Trigger: GCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCAGGTCAGCTTGGTCTCTGGTTCATCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000519859.1
ENST00000521089.5
ENST00000523043.5
CDS GCA 90 bp GAGTGTCTGAGGCGTCCAGAGGCCGGGTCCGGAACAGGCAGGTTGTaGTTTCAGAGCAAGGAAGGACAGCCACGCGGATATTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: ECLRRPEAGSGTGRL*FQSKEGQPRGYSLS
Trigger: AGAAAGTGAATATCCGCGTGGCTGTCCTTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGACCCGGCCTCTGGACGCCTCAGACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524093.5
ENST00000524228.5
CDS CCA 90 bp AGCTGCTTGCCCTCCGTTCCTGGTTCCTCCAGCCGGTATCTTTCCTaGGCGCTGTTACCAAGGCTCAGTTCACAAAGAGTGGCACTCAGC +
Preference number: 5 (lower is better)
Translates to: SCLPSVPGSSSRYLS*ALLPRLSSQRVALS
Trigger: GCTGAGTGCCACTCTTTGTGAACTGAGCCTTGGTAACAGCGCCCAGGAAAGATACCGGCTGGAGGAACCAGGAACGGAGGGCAAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS CCA 90 bp CCTCCACCTCCTCCTCCTCTTCCTCGGCTACTGCCTCATTCTCACTaGTCTCCTCATACCTCCAGCTGTCTTCCAGTGTCTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PPPPPPLPRLLPHSH*SPHTSSCLPVSVCC
Trigger: GCAGCACACAGACACTGGAAGACAGCTGGAGGTATGAGGAGACCAGTGAGAATGAGGCAGTAGCCGAGGAAGAGGAGGAGGAGGTGGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACTCTCCGTCAGCGCCTaGCTCTGGGTGTCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDALSVSA*LWVSRA
Trigger: AGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGAG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGCTTGGCCCAGCTGCTaGCCCTCCGTTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLAWPSC*PSVPGS
Trigger: GGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTCCGTGTTGGTCTCTTaGTCCACCTTTAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGSVLVS*STFNAG
Trigger: CCCAGCATTAAAGGTGGACAAAGAGACCAACACGGA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAACAAAAGGTGGCTTTTaGGACAGAGTGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPTKGGF*DRVELS
Trigger: TGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTGT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGGATGGGTCACTTACAGCCAGCTTGGGGCATTTGCCCCGTTGCTGTGGCCAAACTGCCCGCTCCACGTaGGGCAGCCACATAAAAACA +
Preference number: 5 (lower is better)
Translates to: RDGSLTASLGHLPRCCGQTARST*GSHIKT
Trigger: TGTTTTTATGTGGCTGCCCAACGTGGAGCGGGCAGT...TTGGCCACAGCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGACCCATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS GCA 90 bp GTCTCCCCTTGGACCAATTCAATTCCAGAAGCATTTGCTAGGGCCTaGTGTGCACTTAGCCCTCAGCTGCTCGGCCCTGCTGCCTACAAC +
Preference number: 5 (lower is better)
Translates to: VSPWTNSIPEAFARA*CALSPQLLGPAAYN
Trigger: GTTGTAGGCAGCAGGGCCGAGCAGCTGAGGGCTAAGTGCACAGCAGGCCCTAGCAAATGCTTCTGGAATTGAATTGGTCCAAGGGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519859.1
CDS-3UTR CAA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCACCAGACGGCATGCAGTaGCTGGTACTCCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SYTQGGRLQLCFIAADAAPDGMQ*LVLLLC
Trigger: GCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGG...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCATCTCAGGGTCATACTaGGAGCTGGATGATGAACCA +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGISGSY*ELDDEP
Trigger: TGGTTCATCATCCAGCTCCAAGTATGACCCTGAGAT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CAA 90 bp TCAGCAGCAAGTGAAGGTGGCACCACTCCCTCCATCACCGCCCATGGGTTCCCATCTCTCTTCAGCTTGTaGACCCGGGATTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SAASEGGTTPSITAHGFPSLFSL*TRDFAV
Trigger: CACTGCAAAATCCCGGGTCAACAAGCTGAAGAGAGA...TGGGAACCCATGGGCGGTGATGGAGGGAGTGGTGCCACCTTCACTTGCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCATCTCTCTCTTCAGCTaGTTGACCCGGGATTTTGCA +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGISLFS*LTRDFA
Trigger: TGCAAAATCCCGGGTCAACAAGCTGAAGAGAGAGAT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CAA 90 bp TCCTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCATCTGCCTTCTGGGTCTaGGCCACCTCATCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: SYTQGGRLQLCFIAADAASAFWV*ATSSSW
Trigger: CCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAGA...TGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGGCCGTATTCACAGCTaGGCCCAGCTGCTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLGRIHS*AQLLAL
Trigger: GAGGGCAAGCAGCTGGGCCAAGCTGTGAATACGGCC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp AGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCAGCCAATTCACTTTCTGGTCTaGTTGCTGCAACAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RLLSPPSLSHCPLHVGQPIHFLV*LLQQSR
Trigger: TCTGCTCTGTTGCAGCAACAAGACCAGAAAGTGAAT...TGGCTGCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCACAAAAGGTGGCTTTTaGGACAGAGTGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGTKGGF*DRVELS
Trigger: TGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTGT...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCGGAGCGCAGCGACTaGACCGAGGAAGGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASERSD*TEEGRF
Trigger: GAAGCGGCCTTCCTCGGTCAAGTCGCTGCGCTCCGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000524228.5
CDS TCA 90 bp TCTGGTGAAGGGCTGGATAGGACATGGATACCCAGAACACCTCATTaGACACTAGAGTGTCTGAGGCGTCCAGAGGCCGGGTCCGGAACA +
Preference number: 5 (lower is better)
Translates to: SGEGLDRTWIPRTPH*TLECLRRPEAGSGT
Trigger: TGTTCCGGACCCGGCCTCTGGACGCCTCAGACACTCTAGTGTTCAATGAGGTGTTCTGGGTATCCATGTCCTATCCAGCCCTTCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524093.5
ENST00000524228.5
CDS GCA 90 bp CGACTCTTTTGTTTGAAGTACAGGCAGCTCTGGCAGCCCGAGGCCTaGACTCCCATTTGCTGGAGCAGAGAGACAGCACCTGCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: RLFCLKYRQLWQPEA*TPICWSRETAPALD
Trigger: GTCTAAAGCAGGTGCTGTCTCTCTGCTCCAGCAAATGGGAGTGCAGGCCTCGGGCTGCCAGAGCTGCCTGTACTTCAAACAAAAGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 90 bp CCATGCCATGTGCAAGTGGGGCCTACTCAGTTGCTAGAATGGTACTaGAAGCTGGGTGCCTTAGAGCTCAAAGGCTCTCTGGAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: PCHVQVGPTQLLEWY*KLGALELKGSLEAP
Trigger: TGGGGCTTCCAGAGAGCCTTTGAGCTCTAAGGCACCCAGCTTGCAGTACCATTCTAGCAACTGAGTAGGCCCCACTTGCACATGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 90 bp GAGCAGACACAGCGTCCAGGCACTCTTCCAGATGGCTCCTGTCGGTaGTACAGACATCGACTCTTAAGGTCTTCTGGTGAAGGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: EQTQRPGTLPDGSCR*YRHRLLRSSGEGLD
Trigger: ATCCAGCCCTTCACCAGAAGACCTTAAGAGTCGATGTCTGTACCACCGACAGGAGCCATCTGGAAGAGTGCCTGGACGCTGTGTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524093.5
CDS-3UTR CAA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCGCTGGGAGTGCAGAGTaGCCACCTGCCGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPAGSAE*PPAGWL
Trigger: AAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAGC...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGGGGAGGTCATGGACTTaGGGGTGCCAGACAGGGAAC +
Preference number: 5 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWGRSWT*GCQTGN
Trigger: GTTCCCTGTCTGGCACCCCAAAGTCCATGACCTCCC...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGGCCGTATTCACAGCTaGGCCCAGCTGCTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAGRIHS*AQLLAL
Trigger: GAGGGCAAGCAGCTGGGCCAAGCTGTGAATACGGCC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCCCGTGGCTCTTGGCTaGTTCCAGCTGCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWPVALG*FQLLLE
Trigger: CTCAAGGAGCAGCTGGAACAAGCCAAGAGCCACGGG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTCCCGTGGCTCTTGGCTaGTTCCAGCTGCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLPVALG*FQLLLE
Trigger: CTCAAGGAGCAGCTGGAACAAGCCAAGAGCCACGGG...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTTTCTCCCCGTGGCTCTaGGCTTGTTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLFSPWL*ACSSCS
Trigger: GGAGCAGCTGGAACAAGCCAAGAGCCACGGGGAGAA...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp AGACTAGGCTGCTTAGCCCACCCAGCCTATCACACTGCCCGCTCCACGTTGGGCTGCATCTGCTTTCCTTaGCAGGTTGACCTCATTTTC +
Preference number: 5 (lower is better)
Translates to: RLGCLAHPAYHTARSTLGCICFP*QVDLIF
Trigger: GAAAATGAGGTCAACCTGCAAAGGAAAGCAGATGCA...GCCCAACGTGGAGCGGGCAGTGTGATAGGCTGGGTGGGCTAAGCAGCCTAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS TCA 90 bp AGAGTGAGCACAGACAGCATCTCTAGGACTCCCGACTGCTTCCACTaGGGCAGTAGGCACGTTTACTTGCTTCATAGACTGGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RVSTDSISRTPDCFH*GSRHVYLLHRLGLC
Trigger: GCAGAGGCCCAGTCTATGAAGCAAGTAAACGTGCCTACTGCCTCAGTGGAAGCAGTCGGGAGTCCTAGAGATGCTGTCTGTGCTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 90 bp ATGCTGCTTGAGAGACTTTTCAGCTGGGAGTGCAGAGTTGCCACCTaGCGGGTGGCTTCCTCCAGTTCTCTCACAAGCTGGTTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: MLLERLFSWECRVAT*RVASSSSLTSWFLL
Trigger: TAAGAGGAACCAGCTTGTGAGAGAACTGGAGGAAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAGCTGAAAAGTCTCTCAAGCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000518334.1
ENST00000521089.5
ENST00000524228.5
CDS CCA 90 bp CTGGCACCATGCCATGTGCAAGTGGGGCCTACTCAGTTGCTAGAATaGTACTGCAAGCTGGGTGCCTTAGAGCTCAAAGGCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: LAPCHVQVGPTQLLE*YCKLGALELKGSLE
Trigger: TTCCAGAGAGCCTTTGAGCTCTAAGGCACCCAGCTTGCAGTACCATTCTAGCAACTGAGTAGGCCCCACTTGCACATGGCATGGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGCCTCACTGTCAAGCTaGGCCAGCTGGATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLASLSS*ASWIFR
Trigger: CCTGAAGATCCAGCTGGCCAAGCTTGACAGTGAGGC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCTGCCTTCTGGGTCTaGGCCACCTCATCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASAFWV*ATSSSW
Trigger: CCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGGGAGGTCATGGACTTaGGGGTGCCAGACAGGGAAC +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAGRSWT*GCQTGN
Trigger: GTTCCCTGTCTGGCACCCCAAAGTCCATGACCTCCC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CCTCAAAGCTCAGAGGAGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATTCCGTGTTGGTCTCTTaGTCCACCTTTAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: PQSSEECRHRCHRAARDHSVLVS*STFNAG
Trigger: CCCAGCATTAAAGGTGGACAAAGAGACCAACACGGA...ATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACTCCTCTGAGCTTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGGCTGTGCCAGGTTCTaGTCGCCTGCAGGTCTAACT +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLGCARF*SPAGLT
Trigger: AGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTAGCCTGTGCACATCCTaGGCAGCTGCCCTCATCATC +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSLCTS*AAALII
Trigger: GATGATGAGGGCAGCTGCCAAGGATGTGCACAGGCT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACTACCAGCCCCTGGGTaGGGGACGACATGGGATGAT +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDALPAPG*GTTWDD
Trigger: ATCATCCCATGTCGTCCCCAACCCAGGGGCTGGTAG...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp AGTGTAGGCACAGGTGCCACAGAGCAGCACGAGACCATCCTTGTGCTCTACAACCTGGTGCAACTTGCTTaGCTGAGTGGTGCAACAGAC +
Preference number: 5 (lower is better)
Translates to: SVGTGATEQHETILVLYNLVQLA*LSGATD
Trigger: GTCTGTTGCACCACTCAGCAAAGCAAGTTGCACCAG...GTTGTAGAGCACAAGGATGGTCTCGTGCTGCTCTGTGGCACCTGTGCCTACACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS TCA 90 bp CCTTTAATGCTGGGTACCCATCCATATCAGGTGAGGCTTTCTCGGTaGAAACATCCTCTTCTCCCTCCTCCTCCTCCACCTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PLMLGTHPYQVRLSR*KHPLLPPPPPPPPP
Trigger: AGGAGGAGGAGGTGGAGGAGGAGGAGGGAGAAGAGGATGTTTTCACCGAGAAAGCCTCACCTGATATGGATGGGTACCCAGCATTAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CCA 90 bp AGAGTTGCCACCTGCCGGGTGGCTTCCTCCAGTTCTCTCACAAGCTaGTTCCTCTTACTGTTTAACTTTAACCTCTCCGTCAGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: RVATCRVASSSSLTS*FLLLFNFNLSVSAL
Trigger: CAAGGCGCTGACGGAGAGGTTAAAGTTAAACAGTAAGAGGAACCAGCTTGTGAGAGAACTGGAGGAAGCCACCCGGCAGGTGGCAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000518334.1
ENST00000521089.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTGGGACTGCATGCTGCTaGAGAGACTTTTCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLGTACC*RDFSAG
Trigger: CCCAGCTGAAAAGTCTCTCAAGCAGCATGCAGTCCC...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGCCGGGGTCTCCGTGTaGGTCTCTTTGTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAAGVSV*VSLSTF
Trigger: AAAGGTGGACAAAGAGACCAACACGGAGACCCCGGC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTTCTCCCCGTGGCTCTaGGCTTGTTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPFSPWL*ACSSCS
Trigger: GGAGCAGCTGGAACAAGCCAAGAGCCACGGGGAGAA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAAGCCTGTGCACATCCTaGGCAGCTGCCCTCATCATC +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASLCTS*AAALII
Trigger: GATGATGAGGGCAGCTGCCAAGGATGTGCACAGGCT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCACTTACAGCCAGCTaGGGGCATTTGCCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASLTAS*GHLPRC
Trigger: GCAACGGGGCAAATGCCCCAAGCTGGCTGTAAGTGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS CCA 90 bp TTGAGAGACTTTTCAGCTGGGAGTGCAGAGTTGCCACCTGCCGGGTaGCTTCCTCCAGTTCTCTCACAAGCTGGTTCCTCTTACTGTTTA +
Preference number: 5 (lower is better)
Translates to: LRDFSAGSAELPPAG*LPPVLSQAGSSYCL
Trigger: TAAACAGTAAGAGGAACCAGCTTGTGAGAGAACTGGAGGAAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAGCTGAAAAGTCTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000518334.1
ENST00000521089.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCTGGTAGATCTCCTTTaGTGCACTCAGAGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWLVDLL*CTQSLL
Trigger: CAGGAGGCTCTGAGTGCACAAAAGGAGATCTACCAG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTTCAAACTCCAAGGAGTaGAGGAAGGCATCACCAGCC +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSNSKE*RKASPA
Trigger: GGCTGGTGATGCCTTCCTCAACTCCTTGGAGTTTGA...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTTCCGGAACAGGCAGGTaGTGCTTTCAGAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLSGTGR*CFQSKE
Trigger: TTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGA...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS TCA 90 bp TTCAACATGGCAAGGCTTTCTTCAGGGTCTGAAAGCCACGCTCTTTaGACTGCAGCTCGTGCTGGAGGTGAACCATCTCTCTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: FNMARLSSGSESHAL*TAARAGGEPSLSSA
Trigger: AGCTGAAGAGAGAGATGGTTCACCTCCAGCACGAGCTGCAGTTCAAAGAGCGTGGCTTTCAGACCCTGAAGAAAGCCTTGCCATGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523043.5
CDS GCA 90 bp CCTCTTCAGAGAGAACAAGAAGTGGCTGTCCAAATACAGATGTCTTaGTGTTTTGCTGGACGCCTGGGGGAGCTGGTAGTGTGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: PLQREQEVAVQIQMS*CFAGRLGELVVCKL
Trigger: GAGCTTACACACTACCAGCTCCCCCAGGCGTCCAGCAAAACAGCAAGACATCTGTATTTGGACAGCCACTTCTTGTTCTCTCTGAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS GCA 90 bp CTAGGACTCCCGACTGCTTCCACTGAGGCAGTAGGCACGTTTACTTaGTTCATAGACTGGGCCTCTGCCTCTGATTTCACTAGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: LGLPTASTEAVGTFT*FIDWASASDFTRKR
Trigger: CCTTTTTCTAGTGAAATCAGAGGCAGAGGCCCAGTCTATGAAGCAAGTAAACGTGCCTACTGCCTCAGTGGAAGCAGTCGGGAGTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCCGGAACAGGCAGGTaGTGCTTTCAGAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASGTGR*CFQSKE
Trigger: TTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAGATCTCCTGGGTCAATaGGCTGTGCCAGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDADLLGQ*AVPGSC
Trigger: ACAAGAACCTGGCACAGCCAATTGACCCAGGAGATC...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS TCA 90 bp TTAGCCTCTTCATATCGAAGGCGCAATCTGACCTTCTCTGCCAACTaGTTGTTGCTGTTGATGCCGAAGCTTCCCGAGATGTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: LASSYRRRNLTFSAN*LLLLMPKLPEMSVW
Trigger: CCAGACAGACATCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGAAGAGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS GCA 90 bp CCTTCTCTTAGCCTCTTCATATCGAAGGCGCAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTTGATGCCGAAGCTTCCCGAGATGTC +
Preference number: 5 (lower is better)
Translates to: PSLSLFISKAQSDLL*QLIVAVDAEASRDV
Trigger: GACATCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGAAGAGGCTAAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS CCA 90 bp CAATTATTCAAGCTCTGTCCTTCTCCTTCTCCCACCAACTGGTGGTaGATCAGGGCTAATCAGCTGCTGCTGCCAATGAAGAACGGAAGA +
Preference number: 5 (lower is better)
Translates to: QLFKLCPSPSPTNWW*IRANQLLLPMKNGR
Trigger: TCTTCCGTTCTTCATTGGCAGCAGCAGCTGATTAGCCCTGATCCACCACCAGTTGGTGGGAGAAGGAGAAGGACAGAGCTTGAATAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 90 bp GAACACCAATTATTCAAGCTCTGTCCTTCTCCTTCTCCCACCAACTaGTGGTGGATCAGGGCTAATCAGCTGCTGCTGCCAATGAAGAAC +
Preference number: 5 (lower is better)
Translates to: EHQLFKLCPSPSPTN*WWIRANQLLLPMKN
Trigger: GTTCTTCATTGGCAGCAGCAGCTGATTAGCCCTGATCCACCACCAGTTGGTGGGAGAAGGAGAAGGACAGAGCTTGAATAATTGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCATCTCTCTTCAGCTTGTaGACCCGGGATTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDASLFSL*TRDFAV
Trigger: CACTGCAAAATCCCGGGTCAACAAGCTGAAGAGAGA...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGCTTGGCCCAGCTGCTaGCCCTCCGTTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKAWPSC*PSVPGS
Trigger: GGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTCCGGAACAGGCAGGTaGTGCTTTCAGAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSGTGR*CFQSKE
Trigger: TTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GTGACAAGTGCGGGACGTCCTATTAGGATTACCGTCCCCCAGGCATTACTTCTTACAAAAGGTGGCTTTTaGGACAGAGTGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: VTSAGRPIRITVPQALLLTKGGF*DRVELS
Trigger: TGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTGT...AAGAAGTAATGCCTGGGGGACGGTAATCCTAATAGGACGTCCCGCACTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS GCA 90 bp TCTTCTCTTAGCCTCTTCATATCGAAGGCGCAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTTGATGCCGAAGCTTCCCGAGATGTC +
Preference number: 5 (lower is better)
Translates to: SSLSLFISKAQSDLL*QLIVAVDAEASRDV
Trigger: GACATCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGAAGAGGCTAAGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS GCA 90 bp AAAGGAATTCCCTTGCTCATATTCCAAACACACACACACCACATATaGCACACACACACACACACACACACACACACACACACACGCCCC +
Preference number: 5 (lower is better)
Translates to: KGIPLLIFQTHTHHI*HTHTHTHTHTHTRP
Trigger: GGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCATATGTGGTGTGTGTGTGTTTGGAATATGAGCAAGGGAATTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 90 bp ATGCAGTCAGCAAAGGTGAGCGGTTTGGTGTACCTGACTCCCTCATaGAATCCCAGCAAATTTCAGAAGGATTCGGATACAGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: MQSAKVSGLVYLTPS*NPSKFQKDSDTAHV
Trigger: AACATGGGCTGTATCCGAATCCTTCTGAAATTTGCTGGGATTCCATGAGGGAGTCAGGTACACCAAACCGCTCACCTTTGCTGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519859.1
CDS CCA 90 bp ACAGATCCAAGGTTCAGAGTGGTCCTCTTCAGAGAGAACAAGAAGTaGCTGTCCAAATACAGATGTCTTGCTGTTTTGCTGGACGCCTGG +
Preference number: 5 (lower is better)
Translates to: TDPRFRVVLFRENKK*LSKYRCLAVLLDAW
Trigger: CCAGGCGTCCAGCAAAACAGCAAGACATCTGTATTTGGACAGCCACTTCTTGTTCTCTCTGAAGAGGACCACTCTGAACCTTGGATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS CCA 90 bp GATCTTCAGGTTGGCGATCCATCTAAGACAGGCATTCCTGCAGGATaGAACAGATCCAAGGTTCAGAGTGGTCCTCTTCAGAGAGAACAA +
Preference number: 5 (lower is better)
Translates to: DLQVGDPSKTGIPAG*NRSKVQSGPLQREQ
Trigger: TTGTTCTCTCTGAAGAGGACCACTCTGAACCTTGGATCTGTTCCATCCTGCAGGAATGCCTGTCTTAGATGGATCGCCAACCTGAAGATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS-3UTR CAA 90 bp ACACATGTGACTTTCAAAGTTTTTATTGAGTCCAAATGGACTGCAGATACAGTGGCTGGGAGTGCAGAGTaGCCACCTGCCGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: THVTFKVFIESKWTADTVAGSAE*PPAGWL
Trigger: AAGCCACCCGGCAGGTGGCAACTCTGCACTCCCAGC...CACTGTATCTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAGTCACATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTCCGTGTTGGTCTCTTaGTCCACCTTTAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPSVLVS*STFNAG
Trigger: CCCAGCATTAAAGGTGGACAAAGAGACCAACACGGA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS TCA 90 bp TTAGCCTCTTCATATCGAAGGCGCAATCTGACCTTCTCTGCCAACTaGTTGTTGCTGTTGATGCCGAAATCCAGGTACTGTTTCGGTAGC +
Preference number: 5 (lower is better)
Translates to: LASSYRRRNLTFSAN*LLLLMPKSRYCFGS
Trigger: GCTACCGAAACAGTACCTGGATTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGAAGAGGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517646.1
CDS CCA 90 bp ACTGCTTCCACTGAGGCAGTAGGCACGTTTACTTGCTTCATAGACTaGGCCTCTGCCTCTGATTTCACTAGAAAAAGGAATTCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: TASTEAVGTFTCFID*ASASDFTRKRNSLA
Trigger: AGCAAGGGAATTCCTTTTTCTAGTGAAATCAGAGGCAGAGGCCCAGTCTATGAAGCAAGTAAACGTGCCTACTGCCTCAGTGGAAGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 90 bp CTGCTGCTGCCAATGAAGAACGGAAGAGAGGAAATGGATACGCTTTaGACATCACTGTTAGCAGTTCTGACTAAGCAACTAGTGCGGAGA +
Preference number: 5 (lower is better)
Translates to: LLLPMKNGREEMDTL*TSLLAVLTKQLVRR
Trigger: TCTCCGCACTAGTTGCTTAGTCAGAACTGCTAACAGTGATGTCCAAAGCGTATCCATTTCCTCTCTTCCGTTCTTCATTGGCAGCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACCAGACGGCATGCAGTaGCTGGTACTCCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKPDGMQ*LVLLLC
Trigger: GCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CAA 90 bp ACGTTGGGCAGCCACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCAATTCACTTTCTGGTCTaGTTGCTGCAACAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: TLGSHIKTRHSSRRSVDAIHFLV*LLQQSR
Trigger: TCTGCTCTGTTGCAGCAACAAGACCAGAAAGTGAAT...TGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACCCGTGGCTCTTGGCTaGTTCCAGCTGCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKPVALG*FQLLLE
Trigger: CTCAAGGAGCAGCTGGAACAAGCCAAGAGCCACGGG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp CACATAAAAACACGTCACAGCTCAAGAAGATCCGTGGATGCACCTCTGAATCCCTATCCCCAGTCTAACTaGGGGATGTGGATTCCCAAT +
Preference number: 5 (lower is better)
Translates to: HIKTRHSSRRSVDAPLNPYPQSN*GMWIPN
Trigger: ATTGGGAATCCACATCCCCAAGTTAGACTGGGGATA...GGGATTCAGAGGTGCATCCACGGATCTTCTTGAGCTGTGACGTGTTTTTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp GGCCTCACCATTTTGCCTGTCTCTGCCTGGGTTTCACTCACTTTATACCAGTGGCCTAGTACAATTGAGTaGGGGAAGGTGTTGATTGAT +
Preference number: 5 (lower is better)
Translates to: GLTILPVSAWVSLTLYQWPSTIE*GKVLID
Trigger: ATCAATCAACACCTTCCCCAACTCAATTGTACTAGG...CCACTGGTATAAAGTGAGTGAAACCCAGGCAGAGACAGGCAAAATGGTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS-3UTR CAA 90 bp CTATACACAGGGAGGGCGTTTACAGCTCTGCTTCATAGCAGCGGATGCTGCAGGCTTTCAAAGTTTTTATaGAGTCCAAATGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: LYTGRAFTALLHSSGCCRLSKFL*SPNGLQ
Trigger: CTGCAGTCCATTTGGACTCAATAAAAACTTTGAAAG...CCTGCAGCATCCGCTGCTATGAAGCAGAGCTGTAAACGCCCTCCCTGTGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS TCA 90 bp ACATTTTCTTATCGATTTTCTTCAGGGTCTGAAAGCCACGCTCTTTaGACTGCAGCTCGTGCTGGAGGTGAACCATCTCTCTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: TFSYRFSSGSESHAL*TAARAGGEPSLSSA
Trigger: AGCTGAAGAGAGAGATGGTTCACCTCCAGCACGAGCTGCAGTTCAAAGAGCGTGGCTTTCAGACCCTGAAGAAAATCGATAAGAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
CDS GCA 90 bp CCTTCTCTTAGCCTCTTCATATCGAAGGCGCAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTTGATGCCGAAATCCAGGTACTGTTT +
Preference number: 5 (lower is better)
Translates to: PSLSLFISKAQSDLL*QLIVAVDAEIQVLF
Trigger: AAACAGTACCTGGATTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGAAGAGGCTAAGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517646.1
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAACTGCTCCCGCCGCCATaGTACTCGAGGATCCTCAAT +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKLLPPP*YSRILN
Trigger: ATTGAGGATCCTCGAGTACAATGGCGGCGGGAGCAG...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265293.9
ENST00000393895.7
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGCCGGGGTCTCCGTGTaGGTCTCTTTGTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKAGVSV*VSLSTF
Trigger: AAAGGTGGACAAAGAGACCAACACGGAGACCCCGGC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAAGCTCCTCCTTCTCGTaGATAAGGATCAGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKSSSFS*IRISRS
Trigger: GGACCGGCTGATCCTTATCAACGAGAAGGAGGAGCT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAGGGACTGCATGCTGCTaGAGAGACTTTTCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKGTACC*RDFSAG
Trigger: CCCAGCTGAAAAGTCTCTCAAGCAGCATGCAGTCCC...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524228.5
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAACTGCCCGCTCCACGTaGGGCAGCCACATAAAAACA +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKTARST*GSHIKT
Trigger: TGTTTTTATGTGGCTGCCCAACGTGGAGCGGGCAGT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS TCA 90 bp ATGGAATCCCAGCAAATTTCAGAAGGATTCGGATACAGCCCATGTTaGACTAAAGCTGGAGTCTCCCCTTGGACCAATTCAATTCCAGAA +
Preference number: 5 (lower is better)
Translates to: MESQQISEGFGYSPC*TKAGVSPWTNSIPE
Trigger: TTCTGGAATTGAATTGGTCCAAGGGGAGACTCCAGCTTTAGTTCAACATGGGCTGTATCCGAATCCTTCTGAAATTTGCTGGGATTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519859.1
CDS TCA 90 bp GGAACAGGAGATGCCATGAAGAAACAGACATCTCAGAGCAATCTTTaGCAGTTACTGTCTTCCTTTGATCAGCTTGTCATCTCAAGGAAC +
Preference number: 5 (lower is better)
Translates to: GTGDAMKKQTSQSNL*QLLSSFDQLVISRN
Trigger: GTTCCTTGAGATGACAAGCTGATCAAAGGAAGACAGTAACTGTCAAAGATTGCTCTGAGATGTCTGTTTCTTCATGGCATCTCCTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518334.1
ENST00000624315.1
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAATCCGTGTTGGTCTCTTaGTCCACCTTTAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKSVLVS*STFNAG
Trigger: CCCAGCATTAAAGGTGGACAAAGAGACCAACACGGA...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS-3UTR CAA 90 bp GCATTACTTCTTATTGCAGTAAGACCTCTAAAAGGTGGAGCTGTACAAACCAAAATTCACTTTCTGGTCTaGTTGCTGCAACAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: ALLLIAVRPLKGGAVQTKIHFLV*LLQQSR
Trigger: TCTGCTCTGTTGCAGCAACAAGACCAGAAAGTGAAT...TTTGGTTTGTACAGCTCCACCTTTTAGAGGTCTTACTGCAATAAGAAGTAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000524038.5
ENST00000524228.5
CDS CCA 90 bp AGACCAGTGTTTTTCAAACTGCAAACTGCAACCCCTTACTTAGCATaGGGTGAAATCAATTTGGTGAGTCACAAACTGCATGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: RPVFFKLQTATPYLA*GEINLVSHKLHETK
Trigger: TTTTGTTTCATGCAGTTTGTGACTCACCAAATTGATTTCACCCCATGCTAAGTAAGGGGTTGCAGTTTGCAGTTTGAAAAACACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 90 bp ACTTTCTGGTCTTGTTGCTGCAACAGAGCAGAAAGGTTACTCAGCTaGATGATTAATATTGCAAATTGCTTATTCTTCTCATCATACTTC +
Preference number: 5 (lower is better)
Translates to: TFWSCCCNRAERLLS*MINIANCLFFSSYF
Trigger: GAAGTATGATGAGAAGAATAAGCAATTTGCAATATTAATCATCCAGCTGAGTAACCTTTCTGCTCTGTTGCAGCAACAAGACCAGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524093.5
ENST00000524228.5
CDS GCA 72 bp GAGCTCGCCGGGTTTGTGACTTCTGCCTCCGCCAGGTaGGGCTCGGGCGGTGCAGGTAACCGCGCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: ELAGFVTSASAR*GSGGAGNRAAP
Trigger: CGGGGCAGCGCGGTTACCTGCACCGCCCGAGCCGCACCTGGCGGAGGCAGAAGTCACAAACCCGGCGAGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS TCA 72 bp CCTCTCCGCTCCACCGCTCTGAGCTCGCCGGGTTTGTaGCTTCTGCCTCCGCCAGGTGCGGCTCGGGCGGTG +
Preference number: 6 (lower is better)
Translates to: PLRSTALSSPGL*LLPPPGAARAV
Trigger: CACCGCCCGAGCCGCACCTGGCGGAGGCAGAAGTCACAAACCCGGCGAGCTCAGAGCGGTGGAGCGGAGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS CCA 72 bp ACGCTCGGAGCGCAGCGACTTGACCGAGGAAGGCTGTaGGGGTGGGGACGGCCGCTTCATCCGGACGCTGCG +
Preference number: 6 (lower is better)
Translates to: TLGAQRLDRGRL*GWGRPLHPDAA
Trigger: CGCAGCGTCCGGATGAAGCGGCCGTCCCCACCCCCACAGCCTTCCTCGGTCAAGTCGCTGCGCTCCGAGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
CDS TCA 72 bp AGCCGGGTGCCGTCCCTCCTCTCCGCTCCACCGCTCTaGGCTCGCCGGGTTTGTGACTTCTGCCTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: SRVPSLLSAPPL*ARRVCDFCLRQ
Trigger: CTGGCGGAGGCAGAAGTCACAAACCCGGCGAGCTCAGAGCGGTGGAGCGGAGAGGAGGGACGGCACCCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265293.9
CDS TCA 72 bp GGCCACCTCATCCTCGTGGATGGTGGTGATGCAGCCTaGGGGCCGGAAGCCGGTGGCCCCCTCCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: GHLILVDGGDAA*GPEAGGPLQEQ
Trigger: CTGCTCCTGGAGGGGGCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACCATCCACGAGGATGAGGTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS CAA 90 bp TCCAGGTCCAGCGAGGTACGGATCAGACGCTCGGAGCGCAGCGACTaGACCGAGGAAGGCTGTGGGGGTGGGGACGGCCGCTTCATCCGG +
Preference number: 6 (lower is better)
Translates to: SRSSEVRIRRSERSD*TEEGCGGGDGRFIR
Trigger: CCGGATGAAGCGGCCGTCCCCACCCCCACAGCCTTCCTCGGTCAAGTCGCTGCGCTCCGAGCGTCTGATCCGTACCTCGCTGGACCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
CDS TCA 72 bp AGCGTCCTGGTCCCAGCTCACCGTGCTGGCAGGCCCTaGGGCAGGGGCCATGACTCCCACTGGCTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: SVLVPAHRAGRP*GRGHDSHWLEL
Trigger: GAGCTCAAGCCAGTGGGAGTCATGGCCCCTGCCTCAGGGCCTGCCAGCACGGTGAGCTGGGACCAGGACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522140.1
CDS GCA 72 bp TCCGTCAGCGCCTTGCTCTGGGTGTCCCGGGCTGCCTaGAGGTCCTTTTCCAGCCGCTTCCGGGCCATCTCC +
Preference number: 6 (lower is better)
Translates to: SVSALLWVSRAA*RSFSSRFRAIS
Trigger: GGAGATGGCCCGGAAGCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000518334.1
ENST00000521089.5
ENST00000524228.5
ENST00000624315.1
CDS GCA 72 bp CCTCTCCGTCAGCGCCTTGCTCTGGGTGTCCCGGGCTaGCTGCAGGTCCTTTTCCAGCCGCTTCCGGGCCAT +
Preference number: 6 (lower is better)
Translates to: PLRQRLALGVPG*LQVLFQPLPGH
Trigger: ATGGCCCGGAAGCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000518334.1
ENST00000521089.5
ENST00000524228.5
ENST00000624315.1
CDS TCA 72 bp TCTGGGTCTTGGCCACCTCATCCTCGTGGATGGTGGTaGTGCAGCCTGAGGGCCGGAAGCCGGTGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: SGSWPPHPRGWW*CSLRAGSRWPP
Trigger: AGGGGGCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACCATCCACGAGGATGAGGTGGCCAAGACCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS TCA 72 bp GCGAGGTACGGATCAGACGCTCGGAGCGCAGCGACTTaGCCGAGGAAGGCCGCTTCATCCGGACGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: ARYGSDARSAAT*PRKAASSGRCV
Trigger: GACGCAGCGTCCGGATGAAGCGGCCTTCCTCGGTCAAGTCGCTGCGCTCCGAGCGTCTGATCCGTACCTCGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000522140.1
ENST00000524228.5
CDS TCA 72 bp CAACAGAGCAGACACAGCGTCCGTGCTGGCAGGCCCTaGGGCAGGGGCCATGACTCCCACTGGCTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: QQSRHSVRAGRP*GRGHDSHWLEL
Trigger: GAGCTCAAGCCAGTGGGAGTCATGGCCCCTGCCTCAGGGCCTGCCAGCACGGACGCTGTGTCTGCTCTGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524228.5
CDS CCA 72 bp GAGCGGATGATGGTGCTCCCTCGAAGAAATGGCCCCTaGGACGGGGTGCCCACTCTCCGGTCCTTAGGTCGC +
Preference number: 6 (lower is better)
Translates to: ERMMVLPRRNGP*DGVPTLRSLGR
Trigger: GCGACCTAAGGACCGGAGAGTGGGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGCACCATCATCCGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CAA 72 bp AGCGAGGTACGGATCAGACGCTCGGAGCGCAGCGACTaGACCGAGGAAGGCCGCTTCATCCGGACGCTGCGT +
Preference number: 6 (lower is better)
Translates to: SEVRIRRSERSD*TEEGRFIRTLR
Trigger: ACGCAGCGTCCGGATGAAGCGGCCTTCCTCGGTCAAGTCGCTGCGCTCCGAGCGTCTGATCCGTACCTCGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000522140.1
ENST00000524228.5
CDS TCA 72 bp GCTCGGTCCATCTGCTGGGCAAAGCAAGCAAGGCCCTaGGTCAGTGGAGGGGGCCTCCAGAAAGGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: ARSICWAKQARP*VSGGGLQKGAR
Trigger: CCTTGCCCCTTTCTGGAGGCCCCCTCCACTGACTCAGGGCCTTGCTTGCTTTGCCCAGCAGATGGACCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518204.1
CDS CCA 72 bp CACTCTCCGGTCCTTAGGTCGCACCACTGTGGGGGATaGGGCCGGGGTCTCCGTGTTGGTCTCTTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: HSPVLRSHHCGG*GRGLRVGLFVH
Trigger: GTGGACAAAGAGACCAACACGGAGACCCCGGCCCCATCCCCCACAGTGGTGCGACCTAAGGACCGGAGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS GCA 72 bp TGGGAGCCCAGCTTATGCTCCCAGACGGCATGCAGTTaGTGGTACTCCTGCTGTGCAAGCTCCAGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: WEPSLCSQTACS*WYSCCASSRRC
Trigger: GCAGCGCCTGGAGCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000519859.1
ENST00000521089.5
ENST00000523043.5
CDS CCA 72 bp GGTCTTAGAGCGGATGATGGTGCTCCCTCGAAGAAATaGCCCCTGGGACGGGGTGCCCACTCTCCGGTCCTT +
Preference number: 6 (lower is better)
Translates to: GLRADDGAPSKK*PLGRGAHSPVL
Trigger: AAGGACCGGAGAGTGGGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGCACCATCATCCGCTCTAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CCA 72 bp GGGGTCTCTGAAGCCATGGGAGGCCAGGCAAGAACTTaGGGAACCCGATCCACCTGGCACCATGCCATGTGC +
Preference number: 6 (lower is better)
Translates to: GVSEAMGGQART*GTRSTWHHAMC
Trigger: GCACATGGCATGGTGCCAGGTGGATCGGGTTCCCCAAGTTCTTGCCTGGCCTCCCATGGCTTCAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CAA 72 bp CTGGGAGCCCAGCTTATGCTCCCAGACGGCATGCAGTaGCTGGTACTCCTGCTGTGCAAGCTCCAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: LGAQLMLPDGMQ*LVLLLCKLQAL
Trigger: CAGCGCCTGGAGCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000519859.1
ENST00000521089.5
ENST00000523043.5
CDS TCA 72 bp GATTTCCTATGTCGGCAACCTGAGAGATCTCTGAACTaGGCGTGCTCAGGGTGGAGCCCAGGGGCCCGGAGC +
Preference number: 6 (lower is better)
Translates to: DFLCRQPERSLN*ACSGWSPGARS
Trigger: GCTCCGGGCCCCTGGGCTCCACCCTGAGCACGCTCAGTTCAGAGATCTCTCAGGTTGCCGACATAGGAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 72 bp CTGACCTGGGAGCCCAGCTTATGCTCCCAGACGGCATaGAGTTGCTGGTACTCCTGCTGTGCAAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LTWEPSLCSQTA*SCWYSCCASSR
Trigger: CCTGGAGCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCAGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000519859.1
ENST00000521089.5
ENST00000523043.5
CDS GCA 72 bp AGGCGTCCAGAGGCCGGGTCCGGAACAGGCAGGTTGTaGTTTCAGAGCAAGGAAGGACAGCCACGCGGATAT +
Preference number: 6 (lower is better)
Translates to: RRPEAGSGTGRL*FQSKEGQPRGY
Trigger: ATATCCGCGTGGCTGTCCTTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGACCCGGCCTCTGGACGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524093.5
ENST00000524228.5
CDS GCA 72 bp CATTTGCTAGGGCCTGCTGTGCACTTAGCCCTCAGCTaGTCGGCCCTGCTGCCTACAACCCAGCCAGTCCTT +
Preference number: 6 (lower is better)
Translates to: HLLGPAVHLALS*SALLPTTQPVL
Trigger: AAGGACTGGCTGGGTTGTAGGCAGCAGGGCCGAGCAGCTGAGGGCTAAGTGCACAGCAGGCCCTAGCAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519859.1
CDS CCA 72 bp GGAGGCCAGGCAAGAACTTGGGGAACCCGATCCACCTaGCACCATGCCATGTGCAAGTGGGGCCTACTCAGT +
Preference number: 6 (lower is better)
Translates to: GGQARTWGTRST*HHAMCKWGLLS
Trigger: ACTGAGTAGGCCCCACTTGCACATGGCATGGTGCCAGGTGGATCGGGTTCCCCAAGTTCTTGCCTGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 72 bp GAACCAGAGACCAAGCTGACCTGGGAGCCCAGCTTATaGTCCCAGACGGCATGCAGTTGCTGGTACTCCTGC +
Preference number: 6 (lower is better)
Translates to: EPETKLTWEPSL*SQTACSCWYSC
Trigger: GCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCATAAGCTGGGCTCCCAGGTCAGCTTGGTCTCTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000519859.1
ENST00000521089.5
ENST00000523043.5
CDS CCA 72 bp ATTCACAGCTTGGCCCAGCTGCTTGCCCTCCGTTCCTaGTTCCTCCAGCCGGTATCTTTCCTGGGCGCTGTT +
Preference number: 6 (lower is better)
Translates to: IHSLAQLLALRS*FLQPVSFLGAV
Trigger: AACAGCGCCCAGGAAAGATACCGGCTGGAGGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGCTGTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS CAA 72 bp CCGAGATCTCCTGGGTCAATTGGCTGTGCCAGGTTCTaGTCGCCTGCAGGTCTAACTCCAGGTCCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: PRSPGSIGCARF*SPAGLTPGPAR
Trigger: CCTCGCTGGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCCAATTGACCCAGGAGATCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CAA 90 bp TCACAAAGAGTGGCACTCAGCTCCGGGTCTTCAAACTCCAAGGAGTaGAGGAAGGCATCACCAGCCAGGAGGGGGTCAGCCATGAGAGGG +
Preference number: 6 (lower is better)
Translates to: SQRVALSSGSSNSKE*RKASPARRGSAMRG
Trigger: CCCTCTCATGGCTGACCCCCTCCTGGCTGGTGATGCCTTCCTCAACTCCTTGGAGTTTGAAGACCCGGAGCTGAGTGCCACTCTTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS CAA 90 bp CTAGAGTGTCTGAGGCGTCCAGAGGCCGGGTCCGGAACAGGCAGGTaGTGCTTTCAGAGCAAGGAAGGACAGCCACGCGGATATTCACTT +
Preference number: 6 (lower is better)
Translates to: LECLRRPEAGSGTGR*CFQSKEGQPRGYSL
Trigger: AAGTGAATATCCGCGTGGCTGTCCTTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGACCCGGCCTCTGGACGCCTCAGACACTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524093.5
ENST00000524228.5
CDS CAA 90 bp CCTTCAGCACCGAGATCTCCTGGGTCAATTGGCTGTGCCAGGTTCTaGTCGCCTGCAGGTCTAACTCCAGGTCCAGCGAGGTACGGATCA +
Preference number: 6 (lower is better)
Translates to: PSAPRSPGSIGCARF*SPAGLTPGPARYGS
Trigger: TGATCCGTACCTCGCTGGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS GCA 72 bp TCCTGGGTCAATTGGCTGTGCCAGGTTCTTGTCGCCTaGAGGTCTAACTCCAGGTCCAGCGAGGTACGGATC +
Preference number: 6 (lower is better)
Translates to: SWVNWLCQVLVA*RSNSRSSEVRI
Trigger: GATCCGTACCTCGCTGGACCTGGAGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCCAATTGACCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS GCA 72 bp TGTTTGAAGTACAGGCAGCTCTGGCAGCCCGAGGCCTaGACTCCCATTTGCTGGAGCAGAGAGACAGCACCT +
Preference number: 6 (lower is better)
Translates to: CLKYRQLWQPEA*TPICWSRETAP
Trigger: AGGTGCTGTCTCTCTGCTCCAGCAAATGGGAGTGCAGGCCTCGGGCTGCCAGAGCTGCCTGTACTTCAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp AGCTGCTCCTTGAGCTCCTTCAGCACCGAGATCTCCTaGGTCAATTGGCTGTGCCAGGTTCTTGTCGCCTGC +
Preference number: 6 (lower is better)
Translates to: SCSLSSFSTEIS*VNWLCQVLVAC
Trigger: GCAGGCGACAAGAACCTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCTGAAGGAGCTCAAGGAGCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CAA 90 bp CCGATCCACCTGGCACCATGCCATGTGCAAGTGGGGCCTACTCAGTaGCTAGAATGGTACTGCAAGCTGGGTGCCTTAGAGCTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: PIHLAPCHVQVGPTQ*LEWYCKLGALELKG
Trigger: GCCTTTGAGCTCTAAGGCACCCAGCTTGCAGTACCATTCTAGCAACTGAGTAGGCCCCACTTGCACATGGCATGGTGCCAGGTGGATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS TCA 72 bp GGGCTGGATAGGACATGGATACCCAGAACACCTCATTaGACACTAGAGTGTCTGAGGCGTCCAGAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GLDRTWIPRTPH*TLECLRRPEAG
Trigger: CCCGGCCTCTGGACGCCTCAGACACTCTAGTGTTCAATGAGGTGTTCTGGGTATCCATGTCCTATCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524093.5
ENST00000524228.5
CDS TCA 72 bp TCAGGTTGGCGATCCTGGGGGCCAAGAAAGCAAGCATaGCTGGTGTGCCTAATGGCACTGAGGGAACAGGAG +
Preference number: 6 (lower is better)
Translates to: SGWRSWGPRKQA*LVCLMALREQE
Trigger: CTCCTGTTCCCTCAGTGCCATTAGGCACACCAGTCATGCTTGCTTTCTTGGCCCCCAGGATCGCCAACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518334.1
ENST00000624315.1
CDS GCA 72 bp TCCTTCAGCACCGAGATCTCCTGGGTCAATTGGCTGTaGCAGGTTCTTGTCGCCTGCAGGTCTAACTCCAGG +
Preference number: 6 (lower is better)
Translates to: SFSTEISWVNWL*QVLVACRSNSR
Trigger: CCTGGAGTTAGACCTGCAGGCGACAAGAACCTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS GCA 72 bp GGCAAGAACTTGGGGAACCCGATCCACCTGGCACCATaGCATGTGCAAGTGGGGCCTACTCAGTTGCTAGAA +
Preference number: 6 (lower is better)
Translates to: GKNLGNPIHLAP*HVQVGPTQLLE
Trigger: TTCTAGCAACTGAGTAGGCCCCACTTGCACATGGCATGGTGCCAGGTGGATCGGGTTCCCCAAGTTCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp CCCTCCGTTCCTGGTTCCTCCAGCCGGTATCTTTCCTaGGCGCTGTTACCAAGGCTCAGTTCACAAAGAGTG +
Preference number: 6 (lower is better)
Translates to: PSVPGSSSRYLS*ALLPRLSSQRV
Trigger: CACTCTTTGTGAACTGAGCCTTGGTAACAGCGCCCAGGAAAGATACCGGCTGGAGGAACCAGGAACGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS CAA 90 bp CTAAAGCTGGAGTCTCCCCTTGGACCAATTCAATTCCAGAAGCATTaGCTAGGGCCTGCTGTGCACTTAGCCCTCAGCTGCTCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: LKLESPLGPIQFQKH*LGPAVHLALSCSAL
Trigger: CAGGGCCGAGCAGCTGAGGGCTAAGTGCACAGCAGGCCCTAGCAAATGCTTCTGGAATTGAATTGGTCCAAGGGGAGACTCCAGCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519859.1
CDS TCA 72 bp CTCAAAGGGGTCATAGTAGAGGTCAGTGAAGCTGGCTaGAGTGGAGGAGTCCAGGCTGGATGCAACCAGGGA +
Preference number: 6 (lower is better)
Translates to: LKGVIVEVSEAG*SGGVQAGCNQG
Trigger: TCCCTGGTTGCATCCAGCCTGGACTCCTCCACTTCAGCCAGCTTCACTGACCTCTACTATGACCCCTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS GCA 72 bp CTGCACTCCCATTTGCTGGAGCAGAGAGACAGCACCTaGTTTAGACCAGTGGGGTCTGTGCACTCTGGTCTA +
Preference number: 6 (lower is better)
Translates to: LHSHLLEQRDST*FRPVGSVHSGL
Trigger: TAGACCAGAGTGCACAGACCCCACTGGTCTAAAGCAGGTGCTGTCTCTCTGCTCCAGCAAATGGGAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp TTGCTGTTGATGCCGAAGCTTCCCGAGATGTCTGTCTaGGAGCTCACATCCAGGTACTGTTTCGGTAGCGGG +
Preference number: 6 (lower is better)
Translates to: LLLMPKLPEMSV*ELTSRYCFGSG
Trigger: CCCGCTACCGAAACAGTACCTGGATGTGAGCTCCCAGACAGACATCTCGGGAAGCTTCGGCATCAACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS CCA 72 bp CGCCTCCCAGGCACTCTTCCAGATGGCTCCTGTCGGTaGTACAGACATCGACTCTTAAGGTCTTCTGGTGAA +
Preference number: 6 (lower is better)
Translates to: RLPGTLPDGSCR*YRHRLLRSSGE
Trigger: TTCACCAGAAGACCTTAAGAGTCGATGTCTGTACCACCGACAGGAGCCATCTGGAAGAGTGCCTGGGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CCA 72 bp CCTCCTCCTCTTCCTCGGCTACTGCCTCATTCTCACTaGTCTCCTCATACCTCCAGCTGTCTTCCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: PPPLPRLLPHSH*SPHTSSCLPVS
Trigger: AGACACTGGAAGACAGCTGGAGGTATGAGGAGACCAGTGAGAATGAGGCAGTAGCCGAGGAAGAGGAGGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CCA 72 bp TTGAGCTCCTTCAGCACCGAGATCTCCTGGGTCAATTaGCTGTGCCAGGTTCTTGTCGCCTGCAGGTCTAAC +
Preference number: 6 (lower is better)
Translates to: LSSFSTEISWVN*LCQVLVACRSN
Trigger: GTTAGACCTGCAGGCGACAAGAACCTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCTGAAGGAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CCA 72 bp TCTGAACGACTCTTTTGTTTGAAGTACAGGCAGCTCTaGCAGCCCGAGGCCTGCACTCCCATTTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SERLFCLKYRQL*QPEACTPICWS
Trigger: GCTCCAGCAAATGGGAGTGCAGGCCTCGGGCTGCCAGAGCTGCCTGTACTTCAAACAAAAGAGTCGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CAA 72 bp CTGGCACCATGCCATGTGCAAGTGGGGCCTACTCAGTaGCTAGAATGGTACTGCAAGCTGGGTGCCTTAGAG +
Preference number: 6 (lower is better)
Translates to: LAPCHVQVGPTQ*LEWYCKLGALE
Trigger: CTCTAAGGCACCCAGCTTGCAGTACCATTCTAGCAACTGAGTAGGCCCCACTTGCACATGGCATGGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS TCA 72 bp TGCTTCCGATTCGTCACTGTCAAATGCAGCAGCTTCTaGAGCACCCAGTCTCTGCACGGAAGCCTCGTACAC +
Preference number: 6 (lower is better)
Translates to: CFRFVTVKCSSF*STQSLHGSLVH
Trigger: GTGTACGAGGCTTCCGTGCAGAGACTGGGTGCTTCAGAAGCTGCTGCATTTGACAGTGACGAATCGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524228.5
CDS TCA 72 bp GCAAGGCTTTCTTCAGGGTCTGAAAGCCACGCTCTTTaGACTGCAGCTCGTGCTGGAGGTGAACCATCTCTC +
Preference number: 6 (lower is better)
Translates to: ARLSSGSESHAL*TAARAGGEPSL
Trigger: GAGAGATGGTTCACCTCCAGCACGAGCTGCAGTTCAAAGAGCGTGGCTTTCAGACCCTGAAGAAAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523043.5
CDS GCA 72 bp GTGCAAGTGGGGCCTACTCAGTTGCTAGAATGGTACTaGAAGCTGGGTGCCTTAGAGCTCAAAGGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: VQVGPTQLLEWY*KLGALELKGSL
Trigger: CAGAGAGCCTTTGAGCTCTAAGGCACCCAGCTTGCAGTACCATTCTAGCAACTGAGTAGGCCCCACTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp CAGCGTCCAGGCACTCTTCCAGATGGCTCCTGTCGGTaGTACAGACATCGACTCTTAAGGTCTTCTGGTGAA +
Preference number: 6 (lower is better)
Translates to: QRPGTLPDGSCR*YRHRLLRSSGE
Trigger: TTCACCAGAAGACCTTAAGAGTCGATGTCTGTACCACCGACAGGAGCCATCTGGAAGAGTGCCTGGACGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524093.5
CDS CCA 72 bp TCTGTGCACTCTGGTCTAACACAGACCACTGCCAGGTaGGTCTCTAGCATTTCTGTGACCTGCTTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: SVHSGLTQTTAR*VSSISVTCLAP
Trigger: AGGAGCCAAGCAGGTCACAGAAATGCTAGAGACCCACCTGGCAGTGGTCTGTGTTAGACCAGAGTGCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp TGCCATGTGCAAGTGGGGCCTACTCAGTTGCTAGAATaGTACTGCAAGCTGGGTGCCTTAGAGCTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: CHVQVGPTQLLE*YCKLGALELKG
Trigger: GCCTTTGAGCTCTAAGGCACCCAGCTTGCAGTACCATTCTAGCAACTGAGTAGGCCCCACTTGCACATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CAA 72 bp ACAGAGGGGGCTACTGTAGGGACGGCACCCTCACTCTaGCTCCATGTGGGATCCACTTCATTCAGAACGATA +
Preference number: 6 (lower is better)
Translates to: TEGATVGTAPSL*LHVGSTSFRTI
Trigger: TATCGTTCTGAATGAAGTGGATCCCACATGGAGCAAGAGTGAGGGTGCCGTCCCTACAGTAGCCCCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518204.1
CDS CAA 90 bp ACACAGACCACTGCCAGGTGGGTCTCTAGCATTTCTGTGACCTGCTaGGCTCCTATAAGCATGCCAGTTTGCAACCCCTATCCAGACCAG +
Preference number: 6 (lower is better)
Translates to: TQTTARWVSSISVTC*APISMPVCNPYPDQ
Trigger: CTGGTCTGGATAGGGGTTGCAAACTGGCATGCTTATAGGAGCCAAGCAGGTCACAGAAATGCTAGAGACCCACCTGGCAGTGGTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 72 bp CCGACTGCTTCCACTGAGGCAGTAGGCACGTTTACTTaGTTCATAGACTGGGCCTCTGCCTCTGATTTCACT +
Preference number: 6 (lower is better)
Translates to: PTASTEAVGTFT*FIDWASASDFT
Trigger: AGTGAAATCAGAGGCAGAGGCCCAGTCTATGAAGCAAGTAAACGTGCCTACTGCCTCAGTGGAAGCAGTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp GACGCTGCGTCGCTCCAGGGAGTTTCGAACAAAAGGTaGCTTTTTGGACAGAGTGGAGCTGTCACTATCACT +
Preference number: 6 (lower is better)
Translates to: DAASLQGVSNKR*LFGQSGAVTIT
Trigger: AGTGATAGTGACAGCTCCACTCTGTCCAAAAAGCCACCTTTTGTTCGAAACTCCCTGGAGCGACGCAGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000522140.1
ENST00000524038.5
ENST00000524228.5
CDS CCA 72 bp TTGCTCCATGTAGCTTTTCCTGAAAGACTGAACTTCTaGGGGTTCCTTACAGCTCTGGCCTCGGAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: LLHVAFPERLNF*GFLTALASEPV
Trigger: CACAGGCTCCGAGGCCAGAGCTGTAAGGAACCCCCAGAAGTTCAGTCTTTCAGGAAAAGCTACATGGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521391.1
CDS CAA 90 bp GATTTTGCAGTGGCAATTTCAGCTTTCAGGATCTCAGGGTCATACTaGGAGCTGGATGATGAACCAGAGACCAAGCTGACCTGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: DFAVAISAFRISGSY*ELDDEPETKLTWEP
Trigger: GGGCTCCCAGGTCAGCTTGGTCTCTGGTTCATCATCCAGCTCCAAGTATGACCCTGAGATCCTGAAAGCTGAAATTGCCACTGCAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000523043.5
CDS TCA 72 bp ACAGACAGCATCTCTAGGACTCCCGACTGCTTCCACTaGGGCAGTAGGCACGTTTACTTGCTTCATAGACTG +
Preference number: 6 (lower is better)
Translates to: TDSISRTPDCFH*GSRHVYLLHRL
Trigger: CAGTCTATGAAGCAAGTAAACGTGCCTACTGCCTCAGTGGAAGCAGTCGGGAGTCCTAGAGATGCTGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 72 bp ATACTTCAGGGCAATCTGAATTCGGGTCGCACCCACTaGTTCCGATTCGTCACTGTCAAATGCAGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: ILQGNLNSGRTH*FRFVTVKCSSF
Trigger: GAAGCTGCTGCATTTGACAGTGACGAATCGGAAGCAGTGGGTGCGACCCGAATTCAGATTGCCCTGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524093.5
ENST00000524228.5
CDS GCA 72 bp AGAGAACAAGAAGTGGCTGTCCAAATACAGATGTCTTaGTGTTTTGCTGGACGCCTGGGGGAGCTGGTAGTG +
Preference number: 6 (lower is better)
Translates to: REQEVAVQIQMS*CFAGRLGELVV
Trigger: CACTACCAGCTCCCCCAGGCGTCCAGCAAAACAGCAAGACATCTGTATTTGGACAGCCACTTCTTGTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS CAA 72 bp GAGAGAACAAGAAGTGGCTGTCCAAATACAGATGTCTaGCTGTTTTGCTGGACGCCTGGGGGAGCTGGTAGT +
Preference number: 6 (lower is better)
Translates to: ERTRSGCPNTDV*LFCWTPGGAGS
Trigger: ACTACCAGCTCCCCCAGGCGTCCAGCAAAACAGCAAGACATCTGTATTTGGACAGCCACTTCTTGTTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS CAA 72 bp ACTGCCAGGTGGGTCTCTAGCATTTCTGTGACCTGCTaGGCTCCTATAAGCATGCCAGTTTGCAACCCCTAT +
Preference number: 6 (lower is better)
Translates to: TARWVSSISVTC*APISMPVCNPY
Trigger: ATAGGGGTTGCAAACTGGCATGCTTATAGGAGCCAAGCAGGTCACAGAAATGCTAGAGACCCACCTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CAA 90 bp CCTAGCGGCAACTCATCACTAATGCAGTCAGCAAAGGTGAGCGGTTaGGTGTACCTGACTCCCTCATGGAATCCCAGCAAATTTCAGAAG +
Preference number: 6 (lower is better)
Translates to: PSGNSSLMQSAKVSG*VYLTPSWNPSKFQK
Trigger: CTTCTGAAATTTGCTGGGATTCCATGAGGGAGTCAGGTACACCAAACCGCTCACCTTTGCTGACTGCATTAGTGATGAGTTGCCGCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519859.1
CDS CAA 90 bp CTGGTAGTGTGTAAGCTCCGAATTGCTGGGAGTTGCCTGGCCACATaGACAGGAAAGTCTTCTCTTAGCCTCTTCATATCGAAGGCGCAA +
Preference number: 6 (lower is better)
Translates to: LVVCKLRIAGSCLAT*TGKSSLSLFISKAQ
Trigger: TTGCGCCTTCGATATGAAGAGGCTAAGAGAAGACTTTCCTGTCAATGTGGCCAGGCAACTCCCAGCAATTCGGAGCTTACACACTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS TCA 72 bp TATCGATTTTCTTCAGGGTCTGAAAGCCACGCTCTTTaGACTGCAGCTCGTGCTGGAGGTGAACCATCTCTC +
Preference number: 6 (lower is better)
Translates to: YRFSSGSESHAL*TAARAGGEPSL
Trigger: GAGAGATGGTTCACCTCCAGCACGAGCTGCAGTTCAAAGAGCGTGGCTTTCAGACCCTGAAGAAAATCGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
CDS TCA 72 bp TCATATCGAAGGCGCAATCTGACCTTCTCTGCCAACTaGTTGTTGCTGTTGATGCCGAAGCTTCCCGAGATG +
Preference number: 6 (lower is better)
Translates to: SYRRRNLTFSAN*LLLLMPKLPEM
Trigger: CATCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS GCA 72 bp AGCCTCTTCATATCGAAGGCGCAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTTGATGCCGAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SLFISKAQSDLL*QLIVAVDAEAS
Trigger: GGAAGCTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGAAGAGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000517425.5
ENST00000519659.5
ENST00000521089.5
ENST00000524228.5
CDS GCA 72 bp AGGACAGCCACGCGGATATTCACTTTCTGGTCTTGTTaGTGCAACAGAGCAGAAAGGTTACTCAGCTGGATG +
Preference number: 6 (lower is better)
Translates to: RTATRIFTFWSC*CNRAERLLSWM
Trigger: CATCCAGCTGAGTAACCTTTCTGCTCTGTTGCAGCAACAAGACCAGAAAGTGAATATCCGCGTGGCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524093.5
ENST00000524228.5
CDS CAA 72 bp GTGGCAATTTCAGCTTTCAGGATCTCAGGGTCATACTaGGAGCTGGATGATGAACCAGAGACCAAGCTGACC +
Preference number: 6 (lower is better)
Translates to: VAISAFRISGSY*ELDDEPETKLT
Trigger: GGTCAGCTTGGTCTCTGGTTCATCATCCAGCTCCAAGTATGACCCTGAGATCCTGAAAGCTGAAATTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000523043.5
CDS TCA 72 bp AAGGTCATGGGGCAGGGACCATGTCTTGTTAATTTCTaGGTGCCCCAAATTGCCTTGCACACACAATCTGTG +
Preference number: 6 (lower is better)
Translates to: KVMGQGPCLVNF*VPQIALHTQSV
Trigger: CACAGATTGTGTGTGCAAGGCAATTTGGGGCACTCAGAAATTAACAAGACATGGTCCCTGCCCCATGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS GCA 72 bp AGCCTCTTCATATCGAAGGCGCAATCTGACCTTCTCTaGCAACTGATTGTTGCTGTTGATGCCGAAATCCAG +
Preference number: 6 (lower is better)
Translates to: SLFISKAQSDLL*QLIVAVDAEIQ
Trigger: CTGGATTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGAAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517646.1
CDS GCA 72 bp TCTGTGACCTGCTTGGCTCCTATAAGCATGCCAGTTTaGAACCCCTATCCAGACCAGTGTTTTTCAAACTGC +
Preference number: 6 (lower is better)
Translates to: SVTCLAPISMPV*NPYPDQCFSNC
Trigger: GCAGTTTGAAAAACACTGGTCTGGATAGGGGTTGCAAACTGGCATGCTTATAGGAGCCAAGCAGGTCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp GGTAGCATGATTCACCATGCAAAATTCCAGGGTAGCTaGCGCACTGGATGGCAAACCATCTTTCCTGATTTC +
Preference number: 6 (lower is better)
Translates to: GSMIHHAKFQGS*RTGWQTIFPDF
Trigger: GAAATCAGGAAAGATGGTTTGCCATCCAGTGCGCCAGCTACCCTGGAATTTTGCATGGTGAATCATGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CAA 72 bp AAGGACAGCCACGCGGATATTCACTTTCTGGTCTTGTaGCTGCAACAGAGCAGAAAGGTTACTCAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: KDSHADIHFLVL*LQQSRKVTQLD
Trigger: ATCCAGCTGAGTAACCTTTCTGCTCTGTTGCAGCAACAAGACCAGAAAGTGAATATCCGCGTGGCTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524038.5
ENST00000524093.5
ENST00000524228.5
CDS CAA 72 bp AACTCATCACTAATGCAGTCAGCAAAGGTGAGCGGTTaGGTGTACCTGACTCCCTCATGGAATCCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: NSSLMQSAKVSG*VYLTPSWNPSK
Trigger: TTTGCTGGGATTCCATGAGGGAGTCAGGTACACCAAACCGCTCACCTTTGCTGACTGCATTAGTGATGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519859.1
CDS CAA 72 bp TGTAAGCTCCGAATTGCTGGGAGTTGCCTGGCCACATaGACAGGAAAGTCTTCTCTTAGCCTCTTCATATCG +
Preference number: 6 (lower is better)
Translates to: CKLRIAGSCLAT*TGKSSLSLFIS
Trigger: CGATATGAAGAGGCTAAGAGAAGACTTTCCTGTCAATGTGGCCAGGCAACTCCCAGCAATTCGGAGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517425.5
CDS CAA 72 bp CAGGAATGGGGTGCAGACATGAACAAGGCAATGTCCTaGCCCTGTTCCTGGTACAATAGAGATGTGGATTCA +
Preference number: 6 (lower is better)
Translates to: QEWGADMNKAMS*PCSWYNRDVDS
Trigger: TGAATCCACATCTCTATTGTACCAGGAACAGGGCAAGGACATTGCCTTGTTCATGTCTGCACCCCATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS TCA 72 bp TCATATCGAAGGCGCAATCTGACCTTCTCTGCCAACTaGTTGTTGCTGTTGATGCCGAAATCCAGGTACTGT +
Preference number: 6 (lower is better)
Translates to: SYRRRNLTFSAN*LLLLMPKSRYC
Trigger: ACAGTACCTGGATTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGATTGCGCCTTCGATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517646.1
CDS CAA 72 bp TTCTGTGACCTGCTTGGCTCCTATAAGCATGCCAGTTaGCAACCCCTATCCAGACCAGTGTTTTTCAAACTG +
Preference number: 6 (lower is better)
Translates to: FCDLLGSYKHAS*QPLSRPVFFKL
Trigger: CAGTTTGAAAAACACTGGTCTGGATAGGGGTTGCAAACTGGCATGCTTATAGGAGCCAAGCAGGTCACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS TCA 72 bp AATTGCTTATTCTTCTCATCATACTTCAGGGCAATCTaGATTCGGGTCGCACCCACTGCTTCCGATTCGTCA +
Preference number: 6 (lower is better)
Translates to: NCLFFSSYFRAI*IRVAPTASDSS
Trigger: TGACGAATCGGAAGCAGTGGGTGCGACCCGAATTCAGATTGCCCTGAAGTATGATGAGAAGAATAAGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524093.5
ENST00000524228.5
CDS CCA 72 bp TTTTTCAAACTGCAAACTGCAACCCCTTACTTAGCATaGGGTGAAATCAATTTGGTGAGTCACAAACTGCAT +
Preference number: 6 (lower is better)
Translates to: FFKLQTATPYLA*GEINLVSHKLH
Trigger: ATGCAGTTTGTGACTCACCAAATTGATTTCACCCCATGCTAAGTAAGGGGTTGCAGTTTGCAGTTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624315.1
CDS CCA 72 bp TCTTGTTGCTGCAACAGAGCAGAAAGGTTACTCAGCTaGATGATTAATATTGCAAATTGCTTATTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SCCCNRAERLLS*MINIANCLFFS
Trigger: TGAGAAGAATAAGCAATTTGCAATATTAATCATCCAGCTGAGTAACCTTTCTGCTCTGTTGCAGCAACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265293.9
ENST00000393895.7
ENST00000521089.5
ENST00000524093.5
ENST00000524228.5