RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WTIP (Homo sapiens)

Ensembl gene IDs: ENSG00000142279

Ensembl transcript IDs: ENST00000585928.1, ENST00000590071.7

Found 653 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCGGCTCAGCCCACCAGGTGGCGCCCGCGCCATGCCTCGGCCCTaGTGGACTCCGAAGCCGCCACTTCCCTGCGGGCGCCTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: CRLSPPGGARAMPRP*WTPKPPLPCGRLLV
Trigger: CACCAGGAGGCGCCCGCAGGGAAGTGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCATGGCGCGGGCGCCACCTGGTGGGCTGAGCCGGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp CGGCTCAGCCCACCAGGTGGCGCCCGCGCCATGCCTCGGCCCTGCTaGACTCCGAAGCCGCCACTTCCCTGCGGGCGCCTCCTGGTGTTT +
Preference number: 1 (lower is better)
Translates to: RLSPPGGARAMPRPC*TPKPPLPCGRLLVF
Trigger: AAACACCAGGAGGCGCCCGCAGGGAAGTGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCATGGCGCGGGCGCCACCTGGTGGGCTGAGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp CGCGCCATGCCTCGGCCCTGCTGGACTCCGAAGCCGCCACTTCCCTaGGGGCGCCTCCTGGTGTTTGTTCCCTTGGGCTCGGCCTGGACA +
Preference number: 1 (lower is better)
Translates to: RAMPRPCWTPKPPLP*GRLLVFVPLGSAWT
Trigger: TGTCCAGGCCGAGCCCAAGGGAACAAACACCAGGAGGCGCCCGCAGGGAAGTGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCATGGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp CGCTGTGTAAGTCCCTGGCTAAGGCTCCCTGACCACCCCTGTACTTaGCGGCTCAGCCCACCAGGTGGCGCCCGCGCCATGCCTCGGCCC +
Preference number: 1 (lower is better)
Translates to: RCVSPWLRLPDHPCT*RLSPPGGARAMPRP
Trigger: GGGCCGAGGCATGGCGCGGGCGCCACCTGGTGGGCTGAGCCGGCAAGTACAGGGGTGGTCAGGGAGCCTTAGCCAGGGACTTACACAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp CGAAGCCGCCACTTCCCTGCGGGCGCCTCCTGGTGTTTGTTCCCTTaGGCTCGGCCTGGACAGCCCTGCTGGTTCCCGGAGCCTAGCCCA +
Preference number: 1 (lower is better)
Translates to: RSRHFPAGASWCLFP*ARPGQPCWFPEPSP
Trigger: TGGGCTAGGCTCCGGGAACCAGCAGGGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCAGGAGGCGCCCGCAGGGAAGTGGCGGCTTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp GGCAGAGATCCCACACAGTCCTGTCACCATGGCAGGGCAGGTGTGTaGCCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGC +
Preference number: 1 (lower is better)
Translates to: GRDPTQSCHHGRAGV*PGRVHVRSVERSVR
Trigger: GCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACACCTGCCCTGCCATGGTGACAGGACTGTGTGGGATCTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp GGCGCCTCCTGGTGTTTGTTCCCTTGGGCTCGGCCTGGACAGCCCTaGTGGTTCCCGGAGCCTAGCCCAGCCCCGCGAGTGATTCACAGA +
Preference number: 1 (lower is better)
Translates to: GASWCLFPWARPGQP*WFPEPSPAPRVIHR
Trigger: TCTGTGAATCACTCGCGGGGCTGGGCTAGGCTCCGGGAACCAGCAGGGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCAGGAGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp GCCAGCAAAGCCCTCACCCCTCCCGAGTGTGGCACCGGAAGTCCTTaGTGGCCTCCTGGCCAGATGAGGGCTGCCAGACCGGACGAGACA +
Preference number: 1 (lower is better)
Translates to: ASKALTPPECGTGSP*WPPGQMRAARPDET
Trigger: TGTCTCGTCCGGTCTGGCAGCCCTCATCTGGCCAGGAGGCCAGCAAGGACTTCCGGTGCCACACTCGGGAGGGGTGAGGGCTTTGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp CCAGGCACGGTGGAGAGTAGCGTGAGCCACCAGGCGGGCCCAAGCTaGAGAGCTCACCGCATAGCGGGGACAGGGATGGCAGGAGACTTG +
Preference number: 1 (lower is better)
Translates to: PGTVESSVSHQAGPS*RAHRIAGTGMAGDL
Trigger: CAAGTCTCCTGCCATCCCTGTCCCCGCTATGCGGTGAGCTCTTCAGCTTGGGCCCGCCTGGTGGCTCACGCTACTCTCCACCGTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp AGCAAAGCCCTCACCCCTCCCGAGTGTGGCACCGGAAGTCCTTGCTaGCCTCCTGGCCAGATGAGGGCTGCCAGACCGGACGAGACAGGA +
Preference number: 1 (lower is better)
Translates to: SKALTPPECGTGSPC*PPGQMRAARPDETG
Trigger: TCCTGTCTCGTCCGGTCTGGCAGCCCTCATCTGGCCAGGAGGCCAGCAAGGACTTCCGGTGCCACACTCGGGAGGGGTGAGGGCTTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp CTCCTCCTGAGTTTCCTGAGCACTCTCCAGGATCCCAGGCCACCCTaGGGTATCCGGCCAGGGACTAGGAACCTGGCAAGGGCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: LLLSFLSTLQDPRPP*GIRPGTRNLARAWA
Trigger: GGCCCAGGCCCTTGCCAGGTTCCTAGTCCCTGGCCGGATACCCCAGGGTGGCCTGGGATCCTGGAGAGTGCTCAGGAAACTCAGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp CCAGCACCGGAGCCTCCACGCCTGGACTTTACTCTCTGGCCCCAGTaGGATCACCTCCTCCAAGAAGTGGCCCCTGGTCCTGCTGAAGGC +
Preference number: 1 (lower is better)
Translates to: PAPEPPRLDFTLWPQ*DHLLQEVAPGPAEG
Trigger: GCCTTCAGCAGGACCAGGGGCCACTTCTTGGAGGAGGTGATCCCACTGGGGCCAGAGAGTAAAGTCCAGGCGTGGAGGCTCCGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp TCCACGCAGCTCAGGAAGGTGGTGACCCCAGGCCATGGGTCCCGCTaGGGATGCCTGGAAATCCGCATCAACCCAGCTGGCTCAGGTGGA +
Preference number: 1 (lower is better)
Translates to: STQLRKVVTPGHGSR*GCLEIRINPAGSGG
Trigger: TCCACCTGAGCCAGCTGGGTTGATGCGGATTTCCAGGCATCCTCAGCGGGACCCATGGCCTGGGGTCACCACCTTCCTGAGCTGCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp CTGGCCTCCAGCCTGCAGCCCACCCTAACCCTTCCTCAGCAGGGCTaGTCACTATCAGGGATGGCCCAGGTGCTGTCAGAGAAGAGGGTG +
Preference number: 1 (lower is better)
Translates to: LASSLQPTLTLPQQG*SLSGMAQVLSEKRV
Trigger: CACCCTCTTCTCTGACAGCACCTGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGCAGGCTGGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp AGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGTAAGTCCCTaGCTAAGGCTCCCTGACCACCCCTGTACTTGCCGGCTCAGCCCA +
Preference number: 1 (lower is better)
Translates to: RPHSKMQRSPRCVSP*LRLPDHPCTCRLSP
Trigger: TGGGCTGAGCCGGCAAGTACAGGGGTGGTCAGGGAGCCTTAGCCAGGGACTTACACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp GGCTGGGACTCCCAGCCCCAATCTGTTCTCAGGGACGAGAAGTCCTaGCTGAGATCCACGCAGCTCAGGAAGGTGGTGACCCCAGGCCAT +
Preference number: 1 (lower is better)
Translates to: GWDSQPQSVLRDEKS*LRSTQLRKVVTPGH
Trigger: ATGGCCTGGGGTCACCACCTTCCTGAGCTGCGTGGATCTCAGCCAGGACTTCTCGTCCCTGAGAACAGATTGGGGCTGGGAGTCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp GAGGTGAGCCTTTTCCACTGGTGGGTCAGGCCTCAGTGGGGTCACTaGGAACCCACCAAATCCTCCCAAATCCCAGCGTCAGGGCTCTGT +
Preference number: 1 (lower is better)
Translates to: EVSLFHWWVRPQWGH*EPTKSSQIPASGLC
Trigger: ACAGAGCCCTGACGCTGGGATTTGGGAGGATTTGGTGGGTTCTCAGTGACCCCACTGAGGCCTGACCCACCAGTGGAAAAGGCTCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp AGCAGTTCCACTTGGGATTGTCATGGTACCTGCAGCTCAGCAAGCTaGCATCTGTGCTTCCCACCCCAACAGGGGCAGGGAGCCCGGATG +
Preference number: 1 (lower is better)
Translates to: SSSTWDCHGTCSSAS*HLCFPPQQGQGARM
Trigger: CATCCGGGCTCCCTGCCCCTGTTGGGGTGGGAAGCACAGATGTCAGCTTGCTGAGCTGCAGGTACCATGACAATCCCAAGTGGAACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp GAAAACAGGCTAACACAGGGTCTCGCTGTGTTACCCTGGCTGGAGTaGACTGGCAGTCATAGCTCCCTGCAGCCTGGAATCCTGGCCTCA +
Preference number: 1 (lower is better)
Translates to: ENRLTQGLAVLPWLE*TGSHSSLQPGILAS
Trigger: TGAGGCCAGGATTCCAGGCTGCAGGGAGCTATGACTGCCAGTGCACTCCAGCCAGGGTAACACAGCGAGACCCTGTGTTAGCCTGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp ACTCAATGCCAGCCCATGAAAGAAGCCAGCAGGGGAGCTATGCCCTaGAAAGCCACAGGGGTGGAGCTGCCTACGACTATGGGAACACAC +
Preference number: 1 (lower is better)
Translates to: TQCQPMKEASRGAMP*KATGVELPTTMGTH
Trigger: GTGTGTTCCCATAGTCGTAGGCAGCTCCACCCCTGTGGCTTTGCAGGGCATAGCTCCCCTGCTGGCTTCTTTCATGGGCTGGCATTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp CCATACAGGGCAAGGAAGCAGCTAAGGGGTTGGAGTCGGCCATCCTaGCCTCATCTCCAGGGTCCTGGCCACACAAAGTCAACACAAAGG +
Preference number: 1 (lower is better)
Translates to: PYRARKQLRGWSRPS*PHLQGPGHTKSTQR
Trigger: CCTTTGTGTTGACTTTGTGTGGCCAGGACCCTGGAGATGAGGCCAGGATGGCCGACTCCAACCCCTTAGCTGCTTCCTTGCCCTGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp GTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCTaGGAATCAGGCTCTGCTCCAGGAGATGTGTGGGACCAGGACTGG +
Preference number: 1 (lower is better)
Translates to: VRTGKPICSSTSYRG*ESGSAPGDVWDQDW
Trigger: CCAGTCCTGGTCCCACACATCTCCTGGAGCAGAGCCTGATTCCCAGCCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp GGCCCTCTTGGAGAACCTCTGCTAGGGCAGTGCAGAAGGGAAATGTaGGGTCAGAGCCCAAACACAGTATCCCTACTGGGGTACTGCCTA +
Preference number: 1 (lower is better)
Translates to: GPLGEPLLGQCRREM*GQSPNTVSLLGYCL
Trigger: TAGGCAGTACCCCAGTAGGGATACTGTGTTTGGGCTCTGACCCCACATTTCCCTTCTGCACTGCCCTAGCAGAGGTTCTCCAAGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp ACTGACAGCTTGTACAAGGTGCCTGGAAAAGCCGCAGACACTCAATaGCAGCCCATGAAAGAAGCCAGCAGGGGAGCTATGCCCTGCAAA +
Preference number: 1 (lower is better)
Translates to: TDSLYKVPGKAADTQ*QPMKEASRGAMPCK
Trigger: TTTGCAGGGCATAGCTCCCCTGCTGGCTTCTTTCATGGGCTGGCATTGAGTGTCTGCGGCTTTTCCAGGCACCTTGTACAAGCTGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp TCAGGGACAGAGCTTCCCATCCATCCAATCCACAGCCAGGAATCTTaGCGGCAGCAAGAGAAAAGTCACTCATCACCTCCGAGAGAGGCT +
Preference number: 1 (lower is better)
Translates to: SGTELPIHPIHSQES*RQQEKSHSSPPREA
Trigger: AGCCTCTCTCGGAGGTGATGAGTGACTTTTCTCTTGCTGCCGTCAAGATTCCTGGCTGTGGATTGGATGGATGGGAAGCTCTGTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp CTCTGTTGGTCTCGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTaGAGCTTATCCTGTCTCCGTATCTTTCCCCCTCATTCTCGGAGT +
Preference number: 1 (lower is better)
Translates to: LCWSRSSSIPLSLSL*SLSCLRIFPPHSRS
Trigger: ACTCCGAGAATGAGGGGGAAAGATACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCGAGACCAACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp ATGGGGTCAGTGTCACCCCTGGGCATGAAATGGAGATACTGCTGTTaGCAAATGAGCTTGGAGAGCAGAGGCCAAGACTTCTGGGTGTCA +
Preference number: 1 (lower is better)
Translates to: MGSVSPLGMKWRYCC*QMSLESRGQDFWVS
Trigger: TGACACCCAGAAGTCTTGGCCTCTGCTCTCCAAGCTCATTTGCCAACAGCAGTATCTCCATTTCATGCCCAGGGGTGACACTGACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp GCTAAGGGGTTGGAGTCGGCCATCCTGGCCTCATCTCCAGGGTCCTaGCCACACAAAGTCAACACAAAGGTAACCCCAAATAAGAACATG +
Preference number: 1 (lower is better)
Translates to: AKGLESAILASSPGS*PHKVNTKVTPNKNM
Trigger: CATGTTCTTATTTGGGGTTACCTTTGTGTTGACTTTGTGTGGCCAGGACCCTGGAGATGAGGCCAGGATGGCCGACTCCAACCCCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp TACTGCTGTTGGCAAATGAGCTTGGAGAGCAGAGGCCAAGACTTCTaGGTGTCAAGTGAGGTGTCACAACTGGGGCCTGACTTCATAGAG +
Preference number: 1 (lower is better)
Translates to: YCCWQMSLESRGQDF*VSSEVSQLGPDFIE
Trigger: CTCTATGAAGTCAGGCCCCAGTTGTGACACCTCACTTGACACCCAGAAGTCTTGGCCTCTGCTCTCCAAGCTCATTTGCCAACAGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp TCCGTGAGAGACACAGCCAACTTCTCATCAGAAACCATGAGCATCTaGACACGCGGAGTGCACATTCAGAGCGCAGAAGAGAAAGGGAAC +
Preference number: 1 (lower is better)
Translates to: SVRDTANFSSETMSI*TRGVHIQSAEEKGN
Trigger: GTTCCCTTTCTCTTCTGCGCTCTGAATGTGCACTCCGCGTGTTCAGATGCTCATGGTTTCTGATGAGAAGTTGGCTGTGTCTCTCACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp GCCAGCTGGGACCACAGGCAGGAGCCAAGTGCACCCAGCTCTAACTaGCATATTATTTATCACCGCATGATTTATAAAAGCCAGGTCCAG +
Preference number: 1 (lower is better)
Translates to: ASWDHRQEPSAPSSN*HIIYHRMIYKSQVQ
Trigger: CTGGACCTGGCTTTTATAAATCATGCGGTGATAAATAATATGGCAGTTAGAGCTGGGTGCACTTGGCTCCTGCCTGTGGTCCCAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp ACACACACACACACACAAACAAACACACAATTACACCCCACAGTGTaGTCACTTACAGGAGGTGAGCCTTTTCCACTGGTGGGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: THTHTQTNTQLHPTV*SLTGGEPFPLVGQA
Trigger: GGCCTGACCCACCAGTGGAAAAGGCTCACCTCCTGTAAGTGACCACACTGTGGGGTGTAATTGTGTGTTTGTTTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp TCCATCTCTATAATCATGGGGTCAGTGTCACCCCTGGGCATGAAATaGAGATACTGCTGTTGGCAAATGAGCTTGGAGAGCAGAGGCCAA +
Preference number: 1 (lower is better)
Translates to: SISIIMGSVSPLGMK*RYCCWQMSLESRGQ
Trigger: TTGGCCTCTGCTCTCCAAGCTCATTTGCCAACAGCAGTATCTCCATTTCATGCCCAGGGGTGACACTGACCCCATGATTATAGAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp GGATGCGGGAAATGGTATTTTCCTATGATTGATGGGAACACTGCTTaGCACAGATGTTCTAGTGGGCAAGGTGGCCATGTGCATCCAAAG +
Preference number: 1 (lower is better)
Translates to: GCGKWYFPMIDGNTA*HRCSSGQGGHVHPK
Trigger: CTTTGGATGCACATGGCCACCTTGCCCACTAGAACATCTGTGCCAAGCAGTGTTCCCATCAATCATAGGAAAATACCATTTCCCGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp TCCAAAGGCAGGAACCCTTGGCCTGCCATTTTCATGTTCAGGTCTTaGTCCTTGGTAAATAATGAAAGCCAGGCCCAAACACGTAGCTAC +
Preference number: 1 (lower is better)
Translates to: SKGRNPWPAIFMFRS*SLVNNESQAQTRSY
Trigger: GTAGCTACGTGTTTGGGCCTGGCTTTCATTATTTACCAAGGATCAAGACCTGAACATGAAAATGGCAGGCCAAGGGTTCCTGCCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp CCCAAATCTCATCTTGAACTGTACTCCCTTAATTCCCACATTTTGTaGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTT +
Preference number: 1 (lower is better)
Translates to: PKSHLELYSLNSHIL*EGPSGRESESWGQF
Trigger: AAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACAAAATGTGGGAATTAAGGGAGTACAGTTCAAGATGAGATTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 90 bp GTGTTGCTGAAAACATACCCGAAAATGTGGAAGCAACTTTGGAACTaGGTAACAGGCAGAGGTTGGAACAGTTTGGAGGGCTCAGAAGAA +
Preference number: 1 (lower is better)
Translates to: VLLKTYPKMWKQLWN*VTGRGWNSLEGSEE
Trigger: TTCTTCTGAGCCCTCCAAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGGTATGTTTTCAGCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp ATTCCATTTATTAACTTTATCAAAGTACAATACGTGGGGTCCTCATaGTGCCAACAGCCAATGCCAGACTCAAGGTGGAGTCTGACCCTG +
Preference number: 1 (lower is better)
Translates to: IPFINFIKVQYVGSS*CQQPMPDSRWSLTL
Trigger: CAGGGTCAGACTCCACCTTGAGTCTGGCATTGGCTGTTGGCATCATGAGGACCCCACGTATTGTACTTTGATAAAGTTAATAAATGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 90 bp GACATTCACAGGCAACTCACAAAAGGGAAGCCCATGGCCAATGCATaGAAAAGATTCTCATTCTCACAGCTCATCAAATGCACACATTCA +
Preference number: 1 (lower is better)
Translates to: DIHRQLTKGKPMANA*KRFSFSQLIKCTHS
Trigger: TGAATGTGTGCATTTGATGAGCTGTGAGAATGAGAATCTTTTGCATGCATTGGCCATGGGCTTCCCTTTTGTGAGTTGCCTGTGAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 90 bp CTACGACTATGGGAACACACCTCTTGCATCACTGTGACTTGGATATaGGACATGGAGTCAAAGGAAATCACTTTGGAGCTTCAAAATTTG +
Preference number: 1 (lower is better)
Translates to: LRLWEHTSCITVTWI*DMESKEITLELQNL
Trigger: CAAATTTTGAAGCTCCAAAGTGATTTCCTTTGACTCCATGTCTCATATCCAAGTCACAGTGATGCAAGAGGTGTGTTCCCATAGTCGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGAGCCCCCACCCAGGCTaGCTCCCAGAGTCCCCCATC +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGSPHPG*LPESPI
Trigger: GATGGGGGACTCTGGGAGCCAGCCTGGGTGGGGGCT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAGTGGCGCCCGCGCCATaGCTCGGCCCTGCTGGACTC +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPVAPAP*LGPAGL
Trigger: GAGTCCAGCAGGGCCGAGGCATGGCGCGGGCGCCAC...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGGTGGCATCCAGGGCTaGAGGGTCACAGGCCACTGG +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGGGIQG*RVTGHW
Trigger: CCAGTGGCCTGTGACCCTCCAGCCCTGGATGCCACC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGAAGCCGCCACTTCCCTaGGGGCGCCTCCTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGKPPLP*GRLLVF
Trigger: AAACACCAGGAGGCGCCCGCAGGGAAGTGGCGGCTT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGCCCAGCCCCGCGAGTaGTTCACAGAACTCACACCT +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGAQPRE*FTELTP
Trigger: AGGTGTGAGTTCTGTGAATCACTCGCGGGGCTGGGC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCTGTCGTGGAGCCCCTTaGCCCGCGCGCAGACACAGG +
Preference number: 2 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSCRGAP*PARRHR
Trigger: CCTGTGTCTGCGCGCGGGGCAAGGGGCTCCACGACA...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGAATCCTTGGGCCCTATaGCCTCCTGGCAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGNPWAL*PPGSPV
Trigger: CACAGGGCTGCCAGGAGGGCATAGGGCCCAAGGATT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAGTCACCTCGCACCCCTaGCCAAGGCAGGGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPVTSHP*PRQGPS
Trigger: AGAGGGCCCCTGCCTTGGCCAGGGGTGCGAGGTGAC...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACCTGGACAGCCCTGCTaGTTCCCGGAGCCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPPGQPC*FPEPSP
Trigger: TGGGCTAGGCTCCGGGAACCAGCAGGGCTGTCCAGG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGCTCAGCCCACCAGGTaGCGCCCGCGCCATGCCTCG +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQAQPTR*RPRHAS
Trigger: CGAGGCATGGCGCGGGCGCCACCTGGTGGGCTGAGC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGAGAGGCAGGCTTGTCTaGGGATTGCAGGGAGCACTC +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGRGRLV*GLQGAL
Trigger: GAGTGCTCCCTGCAATCCCCAGACAAGCCTGCCTCT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACGGGGGCCAGGCCCCTaGACAACAGACAGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPRGPGP*TTDSSS
Trigger: GGAGCTGCTGTCTGTTGTTCAGGGGCCTGGCCCCCG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCACAGAACTCACACCTaGCGGTGGGGGAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: APGPAEGPTLRCSALHAVHRTHT*RWGRKG
Trigger: CCCCTTCCTCCCCCACCGTCAGGTGTGAGTTCTGTG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGTCACTTACAGGAGGTaGGCCTTTTCCACTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGVTYRR*AFSTGG
Trigger: CCCACCAGTGGAAAAGGCTCACCTCCTGTAAGTGAC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp CCCAGGCTGAGCTGCTCCATACAGGGCAAGGAAGCAGCTAAGGGGTaGGAGTCGGCCATCCTGGCCTCATCTCCAGGGTCCTGGCCACAC +
Preference number: 2 (lower is better)
Translates to: PRLSCSIQGKEAAKG*ESAILASSPGSWPH
Trigger: GTGTGGCCAGGACCCTGGAGATGAGGCCAGGATGGCCGACTCCAACCCCTTAGCTGCTTCCTTGCCCTGTATGGAGCAGCTCAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAAGCTCGGTGGGAAACTaGTTGGAGGGAGCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPSSVGN*LEGAPL
Trigger: CAGGGGAGCTCCCTCCAATCAGTTTCCCACCGAGCT...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACAGGCGGGCCCAAGCTaGAGAGCTCACCGCATAGCG +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPQAGPS*RAHRIA
Trigger: CGCTATGCGGTGAGCTCTTCAGCTTGGGCCCGCCTG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCGGTGGAGAGTAGCGTaGGCCACCAGGCGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQRWRVA*ATRRAQ
Trigger: TTGGGCCCGCCTGGTGGCTCACGCTACTCTCCACCG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGCTGGGTGGGAGGGATaGGCACAGCTGCACCCTACC +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPAGWEG*AQLHPT
Trigger: GGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAGC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGTGGGAGGCAGAGGTTaGAGTCAGCCCAGATCACGC +
Preference number: 2 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSVGGRG*SQPRSR
Trigger: GCGTGATCTGGGCTGACTGCAACCTCTGCCTCCCAC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGCTCTCCCTCTCTCTCTaGAGCTTATCCTGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGLSLSL*SLSCLR
Trigger: ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAG...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCATGTCCCCTGAACCCCTaGGGATTCCGCATCAGGACC +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPCPLNP*GFRIRT
Trigger: GGTCCTGATGCGGAATCCCCAGGGGTTCAGGGGACA...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAAGGGTCACAGGCCACTaGCATGGCTCAGCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRVTGH*HGSAQF
Trigger: GAACTGGGCTGAGCCATGCCAGTGGCCTGTGACCCT...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACGCAGGGAAGTGACTTaGGCAGGCACAGACGGTGAA +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRREVT*AGTDGE
Trigger: TTCACCGTCTGTGCCTGCTCAAGTCACTTCCCTGCG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGTGTCACCCCTGGGCATaGAATGGAGATACTGCTGTT +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGCHPWA*NGDTAV
Trigger: AACAGCAGTATCTCCATTTCATGCCCAGGGGTGACA...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACCTCAGTGGGGTCACTaGGAACCCACCAAATCCTCC +
Preference number: 2 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPPQWGH*EPTKSS
Trigger: GGAGGATTTGGTGGGTTCTCAGTGACCCCACTGAGG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCTCCTGGCAGCCCTGTaGCACATGCCCCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQLLAAL*HMPQVW
Trigger: CCAGACCTGGGGCATGTGTCACAGGGCTGCCAGGAG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCGGGGGTCCGGCCCCTaGAGACAGCAGCTCGGTGGG +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRRGSGP*RQQLGG
Trigger: CCCACCGAGCTGCTGTCTGCAGGGGCCGGACCCCCG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGCTCCCACCCAGCAATaGAGCCGGGTCACCTCGCAC +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQAPTQQ*SRVTSH
Trigger: GTGCGAGGTGACCCGGCTGCATTGCTGGGTGGGAGC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGGAGAAGGACCGGGTTaGCAACAAGGAGAAACCCGG +
Preference number: 2 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSGEGPG*QQGETR
Trigger: CCGGGTTTCTCCTTGTTGCCAACCCGGTCCTTCTCC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTCTCCGGGGGAGGAGGTaGAGCAGTGGCCACCAGCCC +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRLRGRR*SSGHQP
Trigger: GGGCTGGTGGCCACTGCTCCACCTCCTCCCCCGGAG...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGCACTTGGGATTGTCATaGTACCTGCAGCTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGHLGLS*YLQLSK
Trigger: CTTGCTGAGCTGCAGGTACCATGACAATCCCAAGTG...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACAAGTGGAAAGCTGGTaGTGGGGTGGGTGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPQVESW*WGGWEA
Trigger: TGCCTCCCACCCACCCCATCACCAGCTTTCCACTTG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCAGGAGCGTGCATGGTaGCCGGGATGGAGCAGGGTT +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHQERAW*PGWSRV
Trigger: AACCCTGCTCCATCCCGGTCACCATGCACGCTCCTG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCAGACAGCAGCTCGGTaGGAAACTGATTGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: APGPAEGPTLRCSALHAVQTAAR*ETDWRE
Trigger: CTCCCTCCAATCAGTTTCCCACCGAGCTGCTGTCTG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCCTGCGGGCGCCTCCTaGTGTTTGTTCCCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQPAGAS*CLFPWA
Trigger: AGCCCAAGGGAACAAACACCAGGAGGCGCCCGCAGG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCGGAGCCTCCACGCCTaGACTTTACTCTCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQRSLHA*TLLSGP
Trigger: GGGGCCAGAGAGTAAAGTCCAGGCGTGGAGGCTCCG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGTCTCCCAGGGGCGAGTaGCTTCAGTCCAGATGTCCC +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQSPRGE*LQSRCP
Trigger: GGGACATCTGGACTGAAGTCACTCGCCCCTGGGAGA...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGCAGGAGAATTGCTTaGACCCGGGAGGCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHSRRIA*TREAEA
Trigger: AGCCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGGCCCCACTCTAAGATaGAGCGCTCTCCACGCTGTG +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHGPTLR*SALHAV
Trigger: CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGGCTTGTCTGGGGATTaGAGGGAGCACTCACGCCCA +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHGLSGD*REHSRP
Trigger: TGGGCGTGAGTGCTCCCTGCAATCCCCAGACAAGCC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACGCTGTGTAAGTCCCTaGCTAAGGCTCCCTGACCAC +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPRCVSP*LRLPDH
Trigger: GTGGTCAGGGAGCCTTAGCCAGGGACTTACACAGCG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGAAAGGGCAGAGTGTaGCCTGGTGAGGCCACTGCC +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHRKGRV*PGEATA
Trigger: GGCAGTGGCCTCACCAGGCCACACTCTGCCCTTTCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCAGAGACCACATCAGTaGGGGTCCCCTTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHQRPHQ*GSPWAG
Trigger: ACCTGCCCAAGGGGACCCCCACTGATGTGGTCTCTG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCCGCATCAACCCAGCTaGCTCAGGTGGAGATGGAGG +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHPHQPS*LRWRWR
Trigger: CCTCCATCTCCACCTGAGCCAGCTGGGTTGATGCGG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp CAGCCAATGCCAGACTCAAGGTGGAGTCTGACCCTGACCTGCCTCTaGGCCTTCCCATTAGAGCCAGGAGAAAAGCAGCACGCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: QPMPDSRWSLTLTCL*AFPLEPGEKQHAQH
Trigger: GTGCTGGGCGTGCTGCTTTTCTCCTGGCTCTAATGGGAAGGCCAAGAGGCAGGTCAGGGTCAGACTCCACCTTGAGTCTGGCATTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAGGCAGGGCAGGTGTGTaGCCCGGGCGGGTTCACGTG +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGGRAGV*PGRVHV
Trigger: CACGTGAACCCGCCCGGGTCACACACCTGCCCTGCC...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGACGAGAAGTCCTGGCTaGGATCCACGCAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQTRSPG*DPRSSG
Trigger: TCCTGAGCTGCGTGGATCTCAGCCAGGACTTCTCGT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCCTGGAGGCAGAGGTTaGAGTAGGCCCAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQPGGRG*SRPRLC
Trigger: GCACAATCTGGGCCTACTGCAACCTCTGCCTCCAGG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCGGAGGGAACTGCCATaGACAGCTCCGGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRRRELP*TAPGEE
Trigger: CTCCTCCCCCGGAGCTGTGCATGGCAGTTCCCTCCG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGGGATGAGCACAGCTaGACCCTACCCAACTCACCC +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHRDEHS*TLPNSP
Trigger: GGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGCGTGGAGAGGAGTGTaGGCTGGGTGTAGGACAATG +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQAWRGV*AGCRTM
Trigger: CATTGTCCTACACCCAGCGCACACTCCTCTCCACGC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGAGCAGGGCGGCAACTaGGGCCGCAAACACCCATCA +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLREQGGN*GRKHPS
Trigger: TGATGGGTGTTTGCGGCCCCAGTTGCCGCCCTGCTC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGGCTTTCCTGAAGCGTaGCCAGGGCGCCCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRGFPEA*PGRPSH
Trigger: ATGAGAGGGGCGCCCTGGCCACGCTTCAGGAAAGCC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGCCCCAGGTCTGGGATaGTGGCCCAGCAATGCCCTC +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRAPGLG*WPSNAL
Trigger: GAGGGCATTGCTGGGCCACCATCCCAGACCTGGGGC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGGCGGATGGATCGCTTaGGGCCAGGAGTTCCAGACC +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRGGWIA*GQEFQT
Trigger: GGTCTGGAACTCCTGGCCTCAAGCGATCCATCCGCC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACACCCTGCCCGGGAGTaGGCTTTGCGAGGTCGGGGT +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGHPARE*ALRGRG
Trigger: ACCCCGACCTCGCAAAGCGCACTCCCGGGCAGGGTG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGACCACCCCTGTACTTaGCGGCTCAGCCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRDHPCT*RLSPPG
Trigger: ACCTGGTGGGCTGAGCCGGCAAGTACAGGGGTGGTC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACCGGGCGGGTTCACGTaGGCAGCGTGGAGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITPGGFT*AAWRGV
Trigger: CACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGTGAACTCGGCTCACTaGAACCTCAGTCTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQVNSAH*NLSLPS
Trigger: ACTGGGGAGACTGAGGTTGCAGTGAGCCGAGTTCAC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCATCCCAGGCTGAGCTaGTCCATACAGGGCAAGGAA +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQHPRLS*SIQGKE
Trigger: TTCCTTGCCCTGTATGGAGCAGCTCAGCCTGGGATG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTCAGGGGGCCTCCAAGTaGAAAGCTGGTGATGGGGTG +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRQGASK*KAGDGV
Trigger: CACCCCATCACCAGCTTTCCACTTGGAGGCCCCCTG...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACCAAGCCAGGAGCCCTaGAAGAGGGAGCAGGGCGGC +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITPSQEP*KREQGG
Trigger: GCCGCCCTGCTCCCTCTTCCAGGGCTCCTGGCTTGG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGATGCCTCGGCCCTGCTaGACTCCGAAGCCGCCACTT +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRMPRPC*TPKPPL
Trigger: AAGTGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCAT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGCACAGGGCCCACCATaGCACATGCAAAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRAQGPP*HMQRKG
Trigger: CCCCTTCCTTTGCATGTGCCATGGTGGGCCCTGTGC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCAACCAGGCTGGACTTaGACCAGTGCAGGTGGAACT +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHQPGWT*TSAGGT
Trigger: AGTTCCACCTGCACTGGTCCAAGTCCAGCCTGGTTG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp AGGGAGCACTCACGCCCACATAGGATGTGTCCACGTGGACAGCGCTaGGCCCTTTATGTACCCACTGTGGATCCTTCACTAGGCAACCAG +
Preference number: 2 (lower is better)
Translates to: REHSRPHRMCPRGQR*ALYVPTVDPSLGNQ
Trigger: CTGGTTGCCTAGTGAAGGATCCACAGTGGGTACATAAAGGGCCAAGCGCTGTCCACGTGGACACATCCTATGTGGGCGTGAGTGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp CTGAGAACCCACCAAATCCTCCCAAATCCCAGCGTCAGGGCTCTGTaGGTCTCGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LRTHQILPNPSVRAL*VSLQFNPSLPLSLQ
Trigger: CTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCGAGACCAACAGAGCCCTGACGCTGGGATTTGGGAGGATTTGGTGGGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAGACACAGGCTTTCCTaGAGCGTGGCCAGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGRHRLS*SVARAP
Trigger: GGGCGCCCTGGCCACGCTTCAGGAAAGCCTGTGTCT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCATGGAGCAGGGTTCAGTaGAGCAACCCCATGGATATA +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPWSRVQ*SNPMDI
Trigger: TATATCCATGGGGTTGCTTCACTGAACCCTGCTCCA...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAGGCCATGGGTCCCGCTaGGGATGCCTGGAAATCCGC +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITGHGSR*GCLEIR
Trigger: GCGGATTTCCAGGCATCCTCAGCGGGACCCATGGCC...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTCACAGGCCACTGGCATaGCTCAGCCCAGTTCTCACA +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRHRPLA*LSPVLT
Trigger: TGTGAGAACTGGGCTGAGCCATGCCAGTGGCCTGTG...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAGGCCAGGGAAGTGGGTaGAAGGAGAGGAGCCGCGTC +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITGQGSG*KERSRV
Trigger: GACGCGGCTCCTCTCCTTCCACCCACTTCCCTGGCC...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACTTGCATAGGGTGGACTaGGACCTTCACTCATGTCCC +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHLHRVD*DLHSCP
Trigger: GGGACATGAGTGAAGGTCCCAGTCCACCCTATGCAA...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACTGGCTAAGGCTCCCTaGCCACCCCTGTACTTGCCG +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGLAKAP*PPLYLP
Trigger: CGGCAAGTACAGGGGTGGTCAGGGAGCCTTAGCCAG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGGGCCCCTGGTCCTGCTaGAGGCCCCACTCTAAGATG +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQGPWSC*RPHSKM
Trigger: CATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGCC...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGAAACCATGAGCATCTaGACACGCGGAGTGCACATT +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQETMSI*TRGVHI
Trigger: AATGTGCACTCCGCGTGTTCAGATGCTCATGGTTTC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAGAAGACAAGGGGATGTaGCCGGGCAGACCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGEDKGM*PGRPSG
Trigger: CCCTGAGGGTCTGCCCGGTCACATCCCCTTGTCTTC...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTAACTGCGCTAGGAGATaGAGGAACACCCATGTCCCC +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRNCARR*RNTHVP
Trigger: GGGGACATGGGTGTTCCTGCATCTCCTAGCGCAGTT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGTCACCCAGGCTGGAGTaGAGTGGTGTGAACTCGGCT +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRSPRLE*SGVNSA
Trigger: AGCCGAGTTCACACCACTGCACTCCAGCCTGGGTGA...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAACCAAAGAGGCTTCTaGTTGCATAGGGTGGACTGG +
Preference number: 2 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHNQRGF*LHRVDW
Trigger: CCAGTCCACCCTATGCAAGCAGAAGCCTCTTTGGTT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGACCTCCTCCAAGAAGTaGCCCCTGGTCCTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRTSSKK*PLVLLK
Trigger: CTTCAGCAGGACCAGGGGCCACTTCTTGGAGGAGGT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGTAATCCCAGAACTTTaGAAGGTCAAGGCGGATGGA +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPVIPEL*KVKADG
Trigger: TCCATCCGCCTTGACCTTCCAAAGTTCTGGGATTAC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCCCGCTGAGGATGCCTaGAAATCCGCATCAACCCAG +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRPAEDA*KSASTQ
Trigger: CTGGGTTGATGCGGATTTCCAGGCATCCTCAGCGGG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAGGCGGAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGRRRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTCCGCCT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGGGGAGGCTGAGGCATaGGAATTACTTGAACCCTGG +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRGEAEA*ELLEPW
Trigger: CCAGGGTTCAAGTAATTCTCATGCCTCAGCCTCCCC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAGAGGGACCTCCACACTaGATTTCATGGGGCGACCGC +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITEGPPH*ISWGDR
Trigger: GCGGTCGCCCCATGAAATGCAGTGTGGAGGTCCCTC...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCTGGGAATCAGGCTCTaGTCCAGGAGATGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRLGIRL*SRRCVG
Trigger: TCCCACACATCTCCTGGAGCAGAGCCTGATTCCCAG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAAAAGGTGGACACGCGTaGCGAAGTTTTAGAGGAATT +
Preference number: 2 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPKGGHA*RSFRGI
Trigger: AATTCCTCTAAAACTTCGCCACGCGTGTCCACCTTT...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGAAGAGCAGTTCCACTTaGGATTGTCATGGTACCTGC +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQKSSST*DCHGTC
Trigger: GCAGGTACCATGACAATCCCAAGTGGAACTGCTCTT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp TTCAGGGACAGAGCTTCCCATCCATCCAATCCACAGCCAGGAATCTaGACGGCAGCAAGAGAAAAGTCACTCATCACCTCCGAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: FRDRASHPSNPQPGI*TAAREKSLITSERG
Trigger: GCCTCTCTCGGAGGTGATGAGTGACTTTTCTCTTGCTGCCGTCAAGATTCCTGGCTGTGGATTGGATGGATGGGAAGCTCTGTCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCAAAAGCCCATCCACTaGCAAGCACTGTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRQKPIH*QALSQT
Trigger: TGTCTGGGACAGTGCTTGTCAGTGGATGGGCTTTTG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAAGCCTTTTCCACTGGTaGGTCAGGCCTCAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITSLFHW*VRPQWG
Trigger: ACCCCACTGAGGCCTGACCCACCAGTGGAAAAGGCT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAAAGCAGCTAAGGGGTTaGAGTCGGCCATCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITKQLRG*SRPSWP
Trigger: AGGCCAGGATGGCCGACTCCAACCCCTTAGCTGCTT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAACTGCTGTTGGCAAATaGGCTTGGAGAGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITTAVGK*AWRAEA
Trigger: GGCCTCTGCTCTCCAAGCTCATTTGCCAACAGCAGT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACGGATGAAGAAAGAATaGGGGCAGAGGGCACCCCAT +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITRMKKE*GQRAPH
Trigger: ATGGGGTGCCCTCTGCCCTCATTCTTTCTTCATCCG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATGTCAGAGAAGAGGGTaGGCCAGCTGTGTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGCQRRG*ASCVLC
Trigger: ACACAGGACACAGCTGGCTCACCCTCTTCTCTGACA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACGGCCTGGACAGCCCTaGTGGTTCCCGGAGCCTAGC +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRPGQP*WFPEPS
Trigger: GCTAGGCTCCGGGAACCAGCAGGGCTGTCCAGGCCG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTTGCCCCAAGGGCCTATaGAGTCCCTTGACTGCGACC +
Preference number: 2 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRCPKGL*SPLTAT
Trigger: GGTCGCAGTCAAGGGACTGCATAGGCCCTTGGGGCA...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCCTCTGCTAGGGCAGTaGAGAAGGGAAATGTGGGGT +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQPLLGQ*RREMWG
Trigger: ACCCCACATTTCCCTTCTGCACTGCCCTAGCAGAGG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTTGGTGTTTGTTCCCTTaGGCTCGGCCTGGACAGCCC +
Preference number: 2 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRWCLFP*ARPGQP
Trigger: GGGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCA...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAACTAGGCAACCAGGCTaGACTTGGACCAGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITTRQPG*TWTSAG
Trigger: ACCTGCACTGGTCCAAGTCCAGCCTGGTTGCCTAGT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCACGTGGACAGCGCTTaGCCCTTTATGTACCCACTG +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQHVDSA*PFMYPL
Trigger: CAGTGGGTACATAAAGGGCCAAGCGCTGTCCACGTG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTACCGGAAGTCCTTGCTaGCCTCCTGGCCAGATGAGG +
Preference number: 2 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRTGSPC*PPGQMR
Trigger: CCTCATCTGGCCAGGAGGCCAGCAAGGACTTCCGGT...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp GTTTCAGAGAGTGCAAACCCCAACCTTGGCAGCTACCATGTGGTGTaGAGCCTGCGGGTGTACAGAAGTCAAGAATTGAGGTTTGGGAAC +
Preference number: 2 (lower is better)
Translates to: VSESANPNLGSYHVV*SLRVYRSQELRFGN
Trigger: GTTCCCAAACCTCAATTCTTGACTTCTGTACACCCGCAGGCTCAACACCACATGGTAGCTGCCAAGGTTGGGGTTTGCACTCTCTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGGGCCCGCAGGGAAGTaGCTTGAGCAGGCACAGACG +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLGPAGK*LEQAQT
Trigger: CGTCTGTGCCTGCTCAAGTCACTTCCCTGCGGGCCC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCTTCTGGGTGTCAAGTaGGGTGTCACAACTGGGGCC +
Preference number: 2 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRLLGVK*GVTTGA
Trigger: GGCCCCAGTTGTGACACCTCACTTGACACCCAGAAG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACCCAGCTGGCTCAGGTaGAGATGGAGGCTCCGGGAC +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLPSWLR*RWRLRD
Trigger: GTCCCGGAGCCTCCATCTCCACCTGAGCCAGCTGGG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAGGGGTTTCGCCATGTTaGCCAGGATTGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGGVSPC*PGLSRT
Trigger: AGTTCGAGACAATCCTGGCCAACATGGCGAAACCCC...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp CCACCCAAATCTCATCTTGAACTGTACTCCCTTAATTCCCACATTTaGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PPKSHLELYSLNSHI*WEGPSGRESESWGQ
Trigger: CTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACAAAATGTGGGAATTAAGGGAGTACAGTTCAAGATGAGATTTGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGGGACAGCTTTGCAACTaGCCAGTTAGAAGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQGQLCN*PVRRQR
Trigger: CCTTTGCCTTCTAACTGGTCAGTTGCAAAGCTGTCC...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATTCCAGACCACACCCTaGCCGGGAGTGCGCTTTGCG +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLFQTTP*PGVRFA
Trigger: CGCAAAGCGCACTCCCGGGCAGGGTGTGGTCTGGAA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACAGCTGGCAGGAGCGTaGATGGTGACCGGGATGGAG +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLQLAGA*MVTGME
Trigger: CTCCATCCCGGTCACCATGCACGCTCCTGCCAGCTG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGAGGTACATGGGTCAATaGACCTTTAAAACTAAAACC +
Preference number: 2 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQRYMGQ*TFKTKT
Trigger: GGTTTTAGTTTTAAAGGTGCATTGACCCATGTACCT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACCCCTGGGCATGAAATaGAGATACTGCTGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITPLGMK*RYCCWQ
Trigger: TTGCCAACAGCAGTATCTCCATTTCATGCCCAGGGG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGGGGGCTGGCATCCCTaGGGAATCCTTGGGCCCTAT +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLGGWHP*GILGPY
Trigger: ATAGGGCCCAAGGATTCCCCAGGGATGCCAGCCCCC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATTCACGTGCGCAGCGTaGAGAGGAGTGTGCGCTGGG +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLFTCAA*RGVCAG
Trigger: CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACTTGTACAAGGTGCCTaGAAAAGCCGCAGACACTCA +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITLVQGA*KSRRHS
Trigger: TGAGTGTCTGCGGCTTTTCCAGGCACCTTGTACAAG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCTTGACTGCGACCTTTaGCAAAGTGTGTTACTTGGG +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQLDCDL*QSVLLG
Trigger: CCCAAGTAACACACTTTGTCAAAGGTCGCAGTCAAG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATCTATGTCTCTGAGCTaGGCCCCGCTGAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLSMSLS*APLRGR
Trigger: CCTGCCTCTCAGCGGGGCTCAGCTCAGAGACATAGA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGCCATGCCTCGGCCCTaGTGGACTCCGAAGCCGCCA +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDAMPRP*WTPKPP
Trigger: TGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCATGGC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTATGAAATGGAGATACTaGTGTTGGCAAATGAGCTTG +
Preference number: 2 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRMKWRY*CWQMSL
Trigger: CAAGCTCATTTGCCAACAGCAGTATCTCCATTTCAT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACTAAAGTCTGAAAGGTaGACACGCGTGGCGAAGTTT +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITLKSER*TRVAKF
Trigger: AAACTTCGCCACGCGTGTCCACCTTTCAGACTTTAG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATAGTGGCCACCAGCCCTaGCAGAAGGCAATGCGGGGC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDSGHQP*QKAMRG
Trigger: GCCCCGCATTGCCTTCTGTCAGGGCTGGTGGCCACT...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATGCAGCTCAGCAAGCTaGCATCTGTGCTTCCCACCC +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLCSSAS*HLCFPP
Trigger: GGGTGGGAAGCACAGATGTCAGCTTGCTGAGCTGCA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACTTCCTCAGCAGGGCTaGTCACTATCAGGGATGGCC +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLLPQQG*SLSGMA
Trigger: GGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTGGCACGATCTCGGCTaGCTGCAACCTCCGCCTCCC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDWHDLG*LQPPPP
Trigger: GGGAGGCGGAGGTTGCAGTCAGCCGAGATCGTGCCA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAAGTCTATAATGCAATaGCTCACTCCCTACCCCATC +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGKSIMQ*LTPYPI
Trigger: GATGGGGTAGGGAGTGAGTCATTGCATTATAGACTT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACCTTCTCTCGGCCTCTaGTCACGAGCTAGAGACCAG +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLPSLGL*SRARDQ
Trigger: CTGGTCTCTAGCTCGTGAGCAGAGGCCGAGAGAAGG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAACAGGGAAACCTATTTaGTCCTCAACCAGCTACAGA +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITTGKPI*SSTSYR
Trigger: TCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTAGAGGCCAAGACTTCTaGGTGTCAAGTGAGGTGTCA +
Preference number: 2 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRRGQDF*VSSEVS
Trigger: TGACACCTCACTTGACACCCAGAAGTCTTGGCCTCT...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAAGGGACGAGAAGTCCTaGCTGAGATCCACGCAGCTC +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRDEKS*LRSTQL
Trigger: GAGCTGCGTGGATCTCAGCCAGGACTTCTCGTCCCT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACAGAATGATATCGTTTaGCTCTGTGTCTCCACCCAA +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITQNDIV*LCVSTQ
Trigger: TTGGGTGGAGACACAGAGCCAAACGATATCATTCTG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACATTCTCCCATTTGGAATaGCCGTATTCACCCAATACC +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITFSHLE*PYSPNT
Trigger: GGTATTGGGTGAATACGGCCATTCCAAATGGGAGAA...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp GAGCTGCCTACGACTATGGGAACACACCTCTTGCATCACTGTGACTaGGATATGAGACATGGAGTCAAAGGAAATCACTTTGGAGCTTCA +
Preference number: 2 (lower is better)
Translates to: ELPTTMGTHLLHHCD*DMRHGVKGNHFGAS
Trigger: TGAAGCTCCAAAGTGATTTCCTTTGACTCCATGTCTCATATCCAAGTCACAGTGATGCAAGAGGTGTGTTCCCATAGTCGTAGGCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTTGGAGATACTGCTGTTaGCAAATGAGCTTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRWRYCC*QMSLES
Trigger: GCTCTCCAAGCTCATTTGCCAACAGCAGTATCTCCA...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCACCCCTCCCGAGTGTaGCACCGGAAGTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDHPSRV*HRKSLL
Trigger: CAGCAAGGACTTCCGGTGCCACACTCGGGAGGGGTG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGGTAACCCCTTTGTTTTaGCCAATTTCTCCCATTTGG +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQVTPLF*PISPIW
Trigger: CCAAATGGGAGAAATTGGCCAAAACAAAGGGGTTAC...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATGCTCCCCACACCTCTaGCCAGGTCTCATAAATCCT +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLCSPHL*PGLINP
Trigger: AGGATTTATGAGACCTGGGCAGAGGTGTGGGGAGCA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAAAACTAATGGAACCTaGTACCTAGAAGAGGATGAG +
Preference number: 2 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGKTNGT*YLEEDE
Trigger: CTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACCATGCAAAGGTACATaGGTCAATGCACCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITPCKGT*VNAPLK
Trigger: TTTTAAAGGTGCATTGACCCATGTACCTTTGCATGG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTGCCCTAGAGATTTGTaGAACTTTGAACTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQCPRDL*NFELER
Trigger: TCTCTCAAGTTCAAAGTTCCACAAATCTCTAGGGCA...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp AGCTACCATGTGGTGTTGAGCCTGCGGGTGTACAGAAGTCAAGAATaGAGGTTTGGGAACCTCCATCTAGATTTCAGAAGATGTATGAAA +
Preference number: 2 (lower is better)
Translates to: SYHVVLSLRVYRSQE*RFGNLHLDFRRCMK
Trigger: TTTCATACATCTTCTGAAATCTAGATGGAGGTTCCCAAACCTCAATTCTTGACTTCTGTACACCCGCAGGCTCAACACCACATGGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGGCATGAGAATTACTTaGACCCTGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLGMRIT*TLEAEV
Trigger: AACCTCTGCCTCCAGGGTTCAAGTAATTCTCATGCC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAACCTGGCCAACATGCTaGAACCCCCTCTCAACTAAA +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLTWPTC*NPLSTK
Trigger: TTTAGTTGAGAGGGGGTTTCAGCATGTTGGCCAGGT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTGTCCTGTGTGCCTGTaGCAGGTCCCAATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDCPVCL*QVPMAG
Trigger: TCCTGCCATTGGGACCTGTCACAGGCACACAGGACA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACGCGCCCGGCCAGGCTaGACACAATTATTAAATGAA +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRARPG*TQLLNE
Trigger: TTCATTTAATAATTGTGTTCAGCCTGGCCGGGCGCG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCCCACCAGCAGGAACTaGGCTAGGAGATGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDPTSRN*ARRCRN
Trigger: GTTCCTGCATCTCCTAGCGCAGTTCCTGCTGGTGGG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGATAAGAACATGTCCATaGAAAGGTACATGGGTCAAT +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQIRTCP*KGTWVN
Trigger: ATTGACCCATGTACCTTTGCATGGACATGTTCTTAT...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTATGTTTGTTCTTTTaGGCATCAAATACTGCACCC +
Preference number: 2 (lower is better)
Translates to: PENVEATLELGNRQRLEQLCLFF*ASNTAP
Trigger: GGGTGCAGTATTTGATGCCCAAAAGAACAAACATAA...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGCAAAGCCACAGGGGTaGAGCTGCCTACGACTATGG +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDAKPQG*SCLRLW
Trigger: CCATAGTCGTAGGCAGCTCCACCCCTGTGGCTTTGC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 90 bp ATACTAAGGTCCAGGCTGATGTGGTCTCAGATGGAGATGAGGAACTaGTTGGGAACTGGAGCAAAGGTGATTCTTGTTATGTTTAAGCAA +
Preference number: 2 (lower is better)
Translates to: ILRSRLMWSQMEMRN*LGTGAKVILVMFKQ
Trigger: TTGCTTAAACATAACAAGAATCACCTTTGCTCCAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCACATCAGCCTGGACCTTAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAAGCAGGCACAGACGGTaGATAAATAGAAGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLSRHRR*INRSFH
Trigger: GTGGAAGCTTCTATTTATTCACCGTCTGTGCCTGCT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCACTACCCTAAAGTCTaGAAGGTGGACACGCGTGGC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDHYPKV*KVDTRG
Trigger: GCCACGCGTGTCCACCTTTCAGACTTTAGGGTAGTG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTTCAAGCGATTCTCGTaGCTCAGCCTCCTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDFKRFS*LSLLPS
Trigger: ACTGGGGAGGAGGCTGAGGCACGAGAATCGCTTGAA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCTGGACTTTACTCTCTaGCCCCAGTGGGATCACCTC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDLDFTL*PQWDHL
Trigger: GAGGTGATCCCACTGGGGCCAGAGAGTAAAGTCCAG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAACATCTCAATATAGATaGGGTGATGGGTGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLTSQYR*GDGCVL
Trigger: CAGGACACACCCATCACCCCATCTATATTGAGATGT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCCATATTGGTCAGGTTaGTCTCAAACTCCCGACCTC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDPYWSG*SQTPDL
Trigger: GAGGTCGGGAGTTTGAGACCAACCTGACCAATATGG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTGCAGAAGGGAAATGTaGGGTCAGAGCCCAAACACA +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDCRREM*GQSPNT
Trigger: TGTGTTTGGGCTCTGACCCCACATTTCCCTTCTGCA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTTAAAAGGTTTGGCCTaGACCCTCAGTGCACACTGT +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDLKGLA*TLSAHC
Trigger: ACAGTGTGCACTGAGGGTGCAGGCCAAACCTTTTAA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATAGACACAGATTCAACTaGCATCCAAAGGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDRHRFN*HPKGTV
Trigger: GACTGTCCCCTTTGGATGCCAGTTGAATCTGTGTCT...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCAAACTAGACACTTGTaGGTTTGCCGGCATTTGCTT +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDQTRHL*VCRHLL
Trigger: AAGCAAATGCCGGCAAACTCACAAGTGTCTAGTTTG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGAGTTTGCCGGCATTTaGTTTAAAAATAACAAGGCT +
Preference number: 2 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLEFAGI*FKNNKA
Trigger: AGCCTTGTTATTTTTAAAGCAAATGCCGGCAAACTC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATAGCCGTAGGATGGATTaGAATCTGTGCATCATTTAT +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDSRRMD*NLCIIY
Trigger: ATAAATGATGCACAGATTTCAATCCATCCTACGGCT...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGAACTGGAGCAAAGGTaGTTCTTGTTATGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDELEQR*FLLCLS
Trigger: GCTTAAACATAACAAGAATCACCTTTGCTCCAGTTC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTTTATCGGGGGTTTCTaGTTTTGCATCTCTGTCATT +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDFIGGF*FCISVI
Trigger: AATGACAGAGATGCAAAAGCAGAAACCCCCGATAAA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTTATTTATCACCGCATaGTTTATAAAAGCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDLFITA*FIKARS
Trigger: GGACCTGGCTTTTATAAATCATGCGGTGATAAATAA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp AGCCCACCAGGTGGCGCCCGCGCCATGCCTCGGCCCTaGTGGACTCCGAAGCCGCCACTTCCCTGCGGGCGC +
Preference number: 3 (lower is better)
Translates to: SPPGGARAMPRP*WTPKPPLPCGR
Trigger: GCGCCCGCAGGGAAGTGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCATGGCGCGGGCGCCACCTGGTGGGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp AGTCCCTGGCTAAGGCTCCCTGACCACCCCTGTACTTaGCGGCTCAGCCCACCAGGTGGCGCCCGCGCCATG +
Preference number: 3 (lower is better)
Translates to: SPWLRLPDHPCT*RLSPPGGARAM
Trigger: CATGGCGCGGGCGCCACCTGGTGGGCTGAGCCGGCAAGTACAGGGGTGGTCAGGGAGCCTTAGCCAGGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp GCCCTCACCCCTCCCGAGTGTGGCACCGGAAGTCCTTaGTGGCCTCCTGGCCAGATGAGGGCTGCCAGACCG +
Preference number: 3 (lower is better)
Translates to: ALTPPECGTGSP*WPPGQMRAARP
Trigger: CGGTCTGGCAGCCCTCATCTGGCCAGGAGGCCAGCAAGGACTTCCGGTGCCACACTCGGGAGGGGTGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp CCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTaGGCTGGGTGTAGGACAATGGGCGTGGCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: PGGFTCAAWRGV*AGCRTMGVAGG
Trigger: CCCACCTGCCACGCCCATTGTCCTACACCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GGACTCCGAAGCCGCCACTTCCCTGCGGGCGCCTCCTaGTGTTTGTTCCCTTGGGCTCGGCCTGGACAGCCC +
Preference number: 3 (lower is better)
Translates to: GLRSRHFPAGAS*CLFPWARPGQP
Trigger: GGGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCAGGAGGCGCCCGCAGGGAAGTGGCGGCTTCGGAGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGCCCGGGAGTGCGCTTaGCGAGGTCGGGGTCGGGGG +
Preference number: 3 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPARECA*RGRGRG
Trigger: CCCCCGACCCCGACCTCGCAAAGCGCACTCCCGGGC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp GGTCCGGCCCCTGCAGACAGCAGCTCGGTGGGAAACTaGTTGGAGGGAGCTCCCCTGACGCTGACCAGGGCC +
Preference number: 3 (lower is better)
Translates to: GPAPADSSSVGN*LEGAPLTLTRA
Trigger: GGCCCTGGTCAGCGTCAGGGGAGCTCCCTCCAATCAGTTTCCCACCGAGCTGCTGTCTGCAGGGGCCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp CCCACACAGTCCTGTCACCATGGCAGGGCAGGTGTGTaGCCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PTQSCHHGRAGV*PGRVHVRSVER
Trigger: CCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACACCTGCCCTGCCATGGTGACAGGACTGTGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp TGGTGTTTGTTCCCTTGGGCTCGGCCTGGACAGCCCTaGTGGTTCCCGGAGCCTAGCCCAGCCCCGCGAGTG +
Preference number: 3 (lower is better)
Translates to: WCLFPWARPGQP*WFPEPSPAPRV
Trigger: CACTCGCGGGGCTGGGCTAGGCTCCGGGAACCAGCAGGGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp GTGGAGAGTAGCGTGAGCCACCAGGCGGGCCCAAGCTaGAGAGCTCACCGCATAGCGGGGACAGGGATGGCA +
Preference number: 3 (lower is better)
Translates to: VESSVSHQAGPS*RAHRIAGTGMA
Trigger: TGCCATCCCTGTCCCCGCTATGCGGTGAGCTCTTCAGCTTGGGCCCGCCTGGTGGCTCACGCTACTCTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp GCACTCGCCCTAATCCAGGCACGGTGGAGAGTAGCGTaGGCCACCAGGCGGGCCCAAGCTGAAGAGCTCACC +
Preference number: 3 (lower is better)
Translates to: ALALIQARWRVA*ATRRAQAEELT
Trigger: GGTGAGCTCTTCAGCTTGGGCCCGCCTGGTGGCTCACGCTACTCTCCACCGTGCCTGGATTAGGGCGAGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp AGCCAGGAGCCCTGGAAGAGGGAGCAGGGCGGCAACTaGGGCCGCAAACACCCATCAAAGTCCCCAGGACCA +
Preference number: 3 (lower is better)
Translates to: SQEPWKREQGGN*GRKHPSKSPGP
Trigger: TGGTCCTGGGGACTTTGATGGGTGTTTGCGGCCCCAGTTGCCGCCCTGCTCCCTCTTCCAGGGCTCCTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GGCCACCCTGGGGTATCCGGCCAGGGACTAGGAACCTaGCAAGGGCCTGGGCCTGAGATAGGTGAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: GHPGVSGQGLGT*QGPGPEIGELL
Trigger: AAGGAGCTCACCTATCTCAGGCCCAGGCCCTTGCCAGGTTCCTAGTCCCTGGCCGGATACCCCAGGGTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp CTCTCCACGCTGTGTAAGTCCCTGGCTAAGGCTCCCTaGCCACCCCTGTACTTGCCGGCTCAGCCCACCAGG +
Preference number: 3 (lower is better)
Translates to: LSTLCKSLAKAP*PPLYLPAQPTR
Trigger: CCTGGTGGGCTGAGCCGGCAAGTACAGGGGTGGTCAGGGAGCCTTAGCCAGGGACTTACACAGCGTGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp CTAGCAGGAGAGAGCCAGCACCGGAGCCTCCACGCCTaGACTTTACTCTCTGGCCCCAGTGGGATCACCTCC +
Preference number: 3 (lower is better)
Translates to: LAGESQHRSLHA*TLLSGPSGITS
Trigger: GGAGGTGATCCCACTGGGGCCAGAGAGTAAAGTCCAGGCGTGGAGGCTCCGGTGCTGGCTCTCTCCTGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGCAAGAGCAGTTCCACTaGGGATTGTCATGGTACCTG +
Preference number: 3 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGQEQFH*GLSWYL
Trigger: CAGGTACCATGACAATCCCAAGTGGAACTGCTCTTG...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp GGATCACCTCCTCCAAGAAGTGGCCCCTGGTCCTGCTaGAGGCCCCACTCTAAGATGCAGCGCTCTCCACGC +
Preference number: 3 (lower is better)
Translates to: GSPPPRSGPWSC*RPHSKMQRSPR
Trigger: GCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGCCACTTCTTGGAGGAGGTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GAGCCTCCACGCCTGGACTTTACTCTCTGGCCCCAGTaGGATCACCTCCTCCAAGAAGTGGCCCCTGGTCCT +
Preference number: 3 (lower is better)
Translates to: EPPRLDFTLWPQ*DHLLQEVAPGP
Trigger: AGGACCAGGGGCCACTTCTTGGAGGAGGTGATCCCACTGGGGCCAGAGAGTAAAGTCCAGGCGTGGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp AGTTTCCTGAGCACTCTCCAGGATCCCAGGCCACCCTaGGGTATCCGGCCAGGGACTAGGAACCTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: SFLSTLQDPRPP*GIRPGTRNLAR
Trigger: CCTTGCCAGGTTCCTAGTCCCTGGCCGGATACCCCAGGGTGGCCTGGGATCCTGGAGAGTGCTCAGGAAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCTGGTGTTTGTTCCCTaGGGCTCGGCCTGGACAGCC +
Preference number: 3 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQLVFVP*GSAWTA
Trigger: GGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCAG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GCCAGCTGTGTCCTGTGTGCCTGTGACAGGTCCCAATaGCAGGAACTTCAGGCAGGGAGGCAGAGATCCCAC +
Preference number: 3 (lower is better)
Translates to: ASCVLCACDRSQ*QELQAGRQRSH
Trigger: GTGGGATCTCTGCCTCCCTGCCTGAAGTTCCTGCCATTGGGACCTGTCACAGGCACACAGGACACAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGAGGCGGATGGATCGCTaGAGGCCAGGAGTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQRRMDR*RPGVPD
Trigger: GTCTGGAACTCCTGGCCTCAAGCGATCCATCCGCCT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAAGGAGAAGGACCGGGTaGGCAACAAGGAGAAACCCG +
Preference number: 3 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPRRRTG*ATRRNP
Trigger: CGGGTTTCTCCTTGTTGCCAACCCGGTCCTTCTCCT...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp GGGAGGCCAAGGTGGGCTCGCTTGAGGTCAGGAGTTTaGCACCAACCTGGCCAACATGCTGAAACCCCCTCT +
Preference number: 3 (lower is better)
Translates to: GRPRWARLRSGV*HQPGQHAETPS
Trigger: AGAGGGGGTTTCAGCATGTTGGCCAGGTTGGTGTCAAACTCCTGACCTCAAGCGAGCCCACCTTGGCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp TCTAAGATGCAGCGCTCTCCACGCTGTGTAAGTCCCTaGCTAAGGCTCCCTGACCACCCCTGTACTTGCCGG +
Preference number: 3 (lower is better)
Translates to: SKMQRSPRCVSP*LRLPDHPCTCR
Trigger: CCGGCAAGTACAGGGGTGGTCAGGGAGCCTTAGCCAGGGACTTACACAGCGTGGAGAGCGCTGCATCTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp TCCCAGCCCCAATCTGTTCTCAGGGACGAGAAGTCCTaGCTGAGATCCACGCAGCTCAGGAAGGTGGTGACC +
Preference number: 3 (lower is better)
Translates to: SQPQSVLRDEKS*LRSTQLRKVVT
Trigger: GGTCACCACCTTCCTGAGCTGCGTGGATCTCAGCCAGGACTTCTCGTCCCTGAGAACAGATTGGGGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAACTAAAGCAGGAGAATaGCTTGAACCCGGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPTKAGE*LEPGRR
Trigger: CCGCCTCCCGGGTTCAAGCAATTCTCCTGCTTTAGT...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCCACGTGGACAGCGCTaGGCCCTTTATGTACCCACT +
Preference number: 3 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHPRGQR*ALYVPT
Trigger: AGTGGGTACATAAAGGGCCAAGCGCTGTCCACGTGG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATTGTCGTGGAGCCCCTaGCCCCGCGCGCAGACACAG +
Preference number: 3 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGLSWSP*PRAQTQ
Trigger: CTGTGTCTGCGCGCGGGGCAAGGGGCTCCACGACAA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp CAAGGTTTCTTCATAGAGGAAGAAACCCCGGGAGAGTaGCTCCCACGGAGGGAACTGCCATGCACAGCTCCG +
Preference number: 3 (lower is better)
Translates to: QGFFIEEETPGE*LPRRELPCTAP
Trigger: CGGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCCTCTATGAAGAAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGAAGCAGGAGAATTGCTaGAACCCGGGAGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRKQENC*NPGGGG
Trigger: GCCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCTT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp CCCAGAACTTTGGAAGGTCAAGGCGGATGGATCGCTTaGGGCCAGGAGTTCCAGACCAGTCTGGCCAACATG +
Preference number: 3 (lower is better)
Translates to: PRTLEGQGGWIA*GQEFQTSLANM
Trigger: CATGTTGGCCAGACTGGTCTGGAACTCCTGGCCTCAAGCGATCCATCCGCCTTGACCTTCCAAAGTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp CTTTTCCACTGGTGGGTCAGGCCTCAGTGGGGTCACTaGGAACCCACCAAATCCTCCCAAATCCCAGCGTCA +
Preference number: 3 (lower is better)
Translates to: LFHWWVRPQWGH*EPTKSSQIPAS
Trigger: TGACGCTGGGATTTGGGAGGATTTGGTGGGTTCTCAGTGACCCCACTGAGGCCTGACCCACCAGTGGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp ACTTGGGATTGTCATGGTACCTGCAGCTCAGCAAGCTaGCATCTGTGCTTCCCACCCCAACAGGGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: TWDCHGTCSSAS*HLCFPPQQGQG
Trigger: TCCCTGCCCCTGTTGGGGTGGGAAGCACAGATGTCAGCTTGCTGAGCTGCAGGTACCATGACAATCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp TGCCTGGAAAAGCCGCAGACACTCAATGCCAGCCCATaGAAGAAGCCAGCAGGGGAGCTATGCCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: CLEKPQTLNASP*KKPAGELCPAK
Trigger: CTTTGCAGGGCATAGCTCCCCTGCTGGCTTCTTTCATGGGCTGGCATTGAGTGTCTGCGGCTTTTCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp GACCCAAAGTCCCCATGTTGTGTGCAGCCTAGGACTTaGTGCCTTGTGTCCCAGCCACTCCAGCCATTGCTA +
Preference number: 3 (lower is better)
Translates to: DPKSPCCVQPRT*CLVSQPLQPLL
Trigger: TAGCAATGGCTGGAGTGGCTGGGACACAAGGCAGCAAGTCCTAGGCTGCACACAACATGGGGACTTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GGCACATGCAAAGGAAGGGGAGGAGAAGGACCGGGTTaGCAACAAGGAGAAACCCGGCTCAAAGCAGGTTTG +
Preference number: 3 (lower is better)
Translates to: GTCKGRGGEGPG*QQGETRLKAGL
Trigger: CAAACCTGCTTTGAGCCGGGTTTCTCCTTGTTGCCAACCCGGTCCTTCTCCTCCCCTTCCTTTGCATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GGAGAACCTCTGCTAGGGCAGTGCAGAAGGGAAATGTaGGGTCAGAGCCCAAACACAGTATCCCTACTGGGG +
Preference number: 3 (lower is better)
Translates to: GEPLLGQCRREM*GQSPNTVSLLG
Trigger: CCCCAGTAGGGATACTGTGTTTGGGCTCTGACCCCACATTTCCCTTCTGCACTGCCCTAGCAGAGGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGTGTAATCCCAGAACTTaGGAAGGTCAAGGCGGATGG +
Preference number: 3 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQCNPRT*EGQGGW
Trigger: CCATCCGCCTTGACCTTCCAAAGTTCTGGGATTACA...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGACAGGGAAACCTATTaGCTCCTCAACCAGCTACAG +
Preference number: 3 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQDRETY*LLNQLQ
Trigger: CTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp ACAATTACACCCCACAGTGTGGTCACTTACAGGAGGTaGGCCTTTTCCACTGGTGGGTCAGGCCTCAGTGGG +
Preference number: 3 (lower is better)
Translates to: TITPHSVVTYRR*AFSTGGSGLSG
Trigger: CCCACTGAGGCCTGACCCACCAGTGGAAAAGGCTCACCTCCTGTAAGTGACCACACTGTGGGGTGTAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp GTGCTCCAAGGTGGAGTCAGGACAGGGAAACCTATTTaGTCCTCAACCAGCTACAGAGGCTGGGAATCAGGC +
Preference number: 3 (lower is better)
Translates to: VLQGGVRTGKPI*SSTSYRGWESG
Trigger: GCCTGATTCCCAGCCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp GGGCCAAGGTACAGCTCAGCCCATGGTTTCAGAGAGTaGAAACCCCAACCTTGGCAGCTACCATGTGGTGTT +
Preference number: 3 (lower is better)
Translates to: GPRYSSAHGFRE*KPQPWQLPCGV
Trigger: AACACCACATGGTAGCTGCCAAGGTTGGGGTTTGCACTCTCTGAAACCATGGGCTGAGCTGTACCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp TGGCAAATGAGCTTGGAGAGCAGAGGCCAAGACTTCTaGGTGTCAAGTGAGGTGTCACAACTGGGGCCTGAC +
Preference number: 3 (lower is better)
Translates to: WQMSLESRGQDF*VSSEVSQLGPD
Trigger: GTCAGGCCCCAGTTGTGACACCTCACTTGACACCCAGAAGTCTTGGCCTCTGCTCTCCAAGCTCATTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp CCGGACACACACGGAACCCCACACTACCCTAAAGTCTaGAAGGTGGACACGCGTGGCGAAGTTTTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: PDTHGTPHYPKV*KVDTRGEVLEE
Trigger: TTCCTCTAAAACTTCGCCACGCGTGTCCACCTTTCAGACTTTAGGGTAGTGTGGGGTTCCGTGTGTGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp CTTGGCACAGATGTTCTAGTGGGCAAGGTGGCCATGTaGATCCAAAGGCAGGAACCCTTGGCCTGCCATTTT +
Preference number: 3 (lower is better)
Translates to: LGTDVLVGKVAM*IQRQEPLACHF
Trigger: AAAATGGCAGGCCAAGGGTTCCTGCCTTTGGATGCACATGGCCACCTTGCCCACTAGAACATCTGTGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp TGTACCCACTGTGGATCCTTCACTAGGCAACCAGGCTaGACTTGGACCAGTGCAGGTGGAACTAAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: CTHCGSFTRQPG*TWTSAGGTKPR
Trigger: TCTTGGCTTAGTTCCACCTGCACTGGTCCAAGTCCAGCCTGGTTGCCTAGTGAAGGATCCACAGTGGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp TTGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATaGGGGCAGTTTCCCCCACACTGTTCTCATGGTAGT +
Preference number: 3 (lower is better)
Translates to: LWEGPSGRESES*GQFPPHCSHGS
Trigger: ACTACCATGAGAACAGTGTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCTTGAGGTCAGGAGTTaGACACCAACCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRLEVRS*TPTWPT
Trigger: TGTTGGCCAGGTTGGTGTCAAACTCCTGACCTCAAG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp GAGCTTCCCATCCATCCAATCCACAGCCAGGAATCTTaGCGGCAGCAAGAGAAAAGTCACTCATCACCTCCG +
Preference number: 3 (lower is better)
Translates to: ELPIHPIHSQES*RQQEKSHSSPP
Trigger: CGGAGGTGATGAGTGACTTTTCTCTTGCTGCCGTCAAGATTCCTGGCTGTGGATTGGATGGATGGGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp TCTCGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTaGAGCTTATCCTGTCTCCGTATCTTTCCCCCTCAT +
Preference number: 3 (lower is better)
Translates to: SRSSSIPLSLSL*SLSCLRIFPPH
Trigger: ATGAGGGGGAAAGATACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTATGGAGATACTGCTGTaGGCAAATGAGCTTGGAGAG +
Preference number: 3 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRMEILL*ANELGE
Trigger: CTCTCCAAGCTCATTTGCCAACAGCAGTATCTCCAT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGGGCCTATGCAGTCCCTaGACTGCGACCTTTGACAAA +
Preference number: 3 (lower is better)
Translates to: PENVEATLELGNRQRLEQGLCSP*TATFDK
Trigger: TTTGTCAAAGGTCGCAGTCAAGGGACTGCATAGGCC...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACAGTTCCACTTGGGATaGTCATGGTACCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGQFHLG*SWYLQL
Trigger: GAGCTGCAGGTACCATGACAATCCCAAGTGGAACTG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACTTAATTCCCACATTTaGTGGGAGGGACCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITLNSHI*WEGPSG
Trigger: CCCACTGGGTCCCTCCCACAAAATGTGGGAATTAAG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp GACACAGCCAACTTCTCATCAGAAACCATGAGCATCTaGACACGCGGAGTGCACATTCAGAGCGCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: DTANFSSETMSI*TRGVHIQSAEE
Trigger: CTCTTCTGCGCTCTGAATGTGCACTCCGCGTGTTCAGATGCTCATGGTTTCTGATGAGAAGTTGGCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp CAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTaGTCTTCCCATCACAGACCCAGAAGCCTAGGAGCA +
Preference number: 3 (lower is better)
Translates to: QDNGENVSRACH*SSHHRPRSLGA
Trigger: TGCTCCTAGGCTTCTGGGTCTGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp TTCTTCCCAGTCTTGGGGATGTCTTTATCAGCAGCGTaGAAACAGGCTAACACAGGGTCTCGCTGTGTTACC +
Preference number: 3 (lower is better)
Translates to: FFPVLGMSLSAA*KQANTGSRCVT
Trigger: GGTAACACAGCGAGACCCTGTGTTAGCCTGTTTTCACGCTGCTGATAAAGACATCCCCAAGACTGGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp ATCAGAATGGTAGATACACTGACAGCTTGTACAAGGTaGCTGGAAAAGCCGCAGACACTCAATGCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: IRMVDTLTACTR*LEKPQTLNASP
Trigger: TGGGCTGGCATTGAGTGTCTGCGGCTTTTCCAGGCACCTTGTACAAGCTGTCAGTGTATCTACCATTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp ATAATCATGGGGTCAGTGTCACCCCTGGGCATGAAATaGAGATACTGCTGTTGGCAAATGAGCTTGGAGAGC +
Preference number: 3 (lower is better)
Translates to: IIMGSVSPLGMK*RYCCWQMSLES
Trigger: GCTCTCCAAGCTCATTTGCCAACAGCAGTATCTCCATTTCATGCCCAGGGGTGACACTGACCCCATGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGATGGAGATGAGGAACTaGTTGGGAACTGGAGCAAAG +
Preference number: 3 (lower is better)
Translates to: PENVEATLELGNRQRLEQMEMRN*LGTGAK
Trigger: CTTTGCTCCAGTTCCCAACAAGTTCCTCATCTCCAT...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp TGCACCTTTAAAACTAAAACCAAAGAGGCTTCTGCTTaGATAGGGTGGACTGGGACCTTCACTCATGTCCCC +
Preference number: 3 (lower is better)
Translates to: CTFKTKTKEASA*IGWTGTFTHVP
Trigger: GGGGACATGAGTGAAGGTCCCAGTCCACCCTATGCAAGCAGAAGCCTCTTTGGTTTTAGTTTTAAAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp CACACACAAACAAACACACAATTACACCCCACAGTGTaGTCACTTACAGGAGGTGAGCCTTTTCCACTGGTG +
Preference number: 3 (lower is better)
Translates to: HTQTNTQLHPTV*SLTGGEPFPLV
Trigger: CACCAGTGGAAAAGGCTCACCTCCTGTAAGTGACCACACTGTGGGGTGTAATTGTGTGTTTGTTTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACGGGGGTTTCTGCTTTaGCATCTCTGTCATTTTTCT +
Preference number: 3 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITRGFLL*HLCHFS
Trigger: AGAAAAATGACAGAGATGCAAAAGCAGAAACCCCCG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTGCATCACTGTGACTaGGATATGAGACATGGAGTC +
Preference number: 3 (lower is better)
Translates to: PENVEATLELGNRQRLEQLHHCD*DMRHGV
Trigger: GACTCCATGTCTCATATCCAAGTCACAGTGATGCAA...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp CTGGTGACAAGACTGACAGACAAAACTAATGGAACCTaGTACCTAGAAGAGGATGAGAAGGATCCCCGTGAA +
Preference number: 3 (lower is better)
Translates to: LVTRLTDKTNGT*YLEEDEKDPRE
Trigger: TTCACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGTCAGTCTTGTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp CATCTTGAACTGTACTCCCTTAATTCCCACATTTTGTaGGAGGGACCCAGTGGGAGAGAATCTGAATCATGG +
Preference number: 3 (lower is better)
Translates to: HLELYSLNSHIL*EGPSGRESESW
Trigger: CCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACAAAATGTGGGAATTAAGGGAGTACAGTTCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp AGGAACCCTTGGCCTGCCATTTTCATGTTCAGGTCTTaGTCCTTGGTAAATAATGAAAGCCAGGCCCAAACA +
Preference number: 3 (lower is better)
Translates to: RNPWPAIFMFRS*SLVNNESQAQT
Trigger: TGTTTGGGCCTGGCTTTCATTATTTACCAAGGATCAAGACCTGAACATGAAAATGGCAGGCCAAGGGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp GTCAAAGGAAATCACTTTGGAGCTTCAAAATTTGACTaGCCCGCTGGATTTTGGACTTGCATGGGTCCTGTA +
Preference number: 3 (lower is better)
Translates to: VKGNHFGASKFD*PAGFWTCMGPV
Trigger: TACAGGACCCATGCAAGTCCAAAATCCAGCGGGGCAGTCAAATTTTGAAGCTCCAAAGTGATTTCCTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp AGGCAACTCACAAAAGGGAAGCCCATGGCCAATGCATaGAAAAGATTCTCATTCTCACAGCTCATCAAATGC +
Preference number: 3 (lower is better)
Translates to: RQLTKGKPMANA*KRFSFSQLIKC
Trigger: GCATTTGATGAGCTGTGAGAATGAGAATCTTTTGCATGCATTGGCCATGGGCTTCCCTTTTGTGAGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp TCACAGGCAACTCACAAAAGGGAAGCCCATGGCCAATaGATGCAAAAGATTCTCATTCTCACAGCTCATCAA +
Preference number: 3 (lower is better)
Translates to: SQATHKREAHGQ*MQKILILTAHQ
Trigger: TTGATGAGCTGTGAGAATGAGAATCTTTTGCATGCATTGGCCATGGGCTTCCCTTTTGTGAGTTGCCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATTTATGTTTGTTCTTTaGGGCATCAAATACTGCACC +
Preference number: 3 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGFMFVL*GIKYCT
Trigger: GGTGCAGTATTTGATGCCCAAAAGAACAAACATAAA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp TGGGAACACACCTCTTGCATCACTGTGACTTGGATATaGGACATGGAGTCAAAGGAAATCACTTTGGAGCTT +
Preference number: 3 (lower is better)
Translates to: WEHTSCITVTWI*DMESKEITLEL
Trigger: AAGCTCCAAAGTGATTTCCTTTGACTCCATGTCTCATATCCAAGTCACAGTGATGCAAGAGGTGTGTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp AGGGTTGGTAAGGATGCGGGAAATGGTATTTTCCTATaGTTGATGGGAACACTGCTTGGCACAGATGTTCTA +
Preference number: 3 (lower is better)
Translates to: RVGKDAGNGIFL*LMGTLLGTDVL
Trigger: TAGAACATCTGTGCCAAGCAGTGTTCCCATCAATCATAGGAAAATACCATTTCCCGCATCCTTACCAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp ATTAACTTTATCAAAGTACAATACGTGGGGTCCTCATaGTGCCAACAGCCAATGCCAGACTCAAGGTGGAGT +
Preference number: 3 (lower is better)
Translates to: INFIKVQYVGSS*CQQPMPDSRWS
Trigger: ACTCCACCTTGAGTCTGGCATTGGCTGTTGGCATCATGAGGACCCCACGTATTGTACTTTGATAAAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GAGCCTGCGGGTGTACAGAAGTCAAGAATTGAGGTTTaGGAACCTCCATCTAGATTTCAGAAGATGTATGAA +
Preference number: 3 (lower is better)
Translates to: EPAGVQKSRIEV*EPPSRFQKMYE
Trigger: TTCATACATCTTCTGAAATCTAGATGGAGGTTCCCAAACCTCAATTCTTGACTTCTGTACACCCGCAGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GCAAAGGTGATTCTTGTTATGTTTAAGCAAAGAGATTaGCGGCATTTTGCCCCTGCCCTAGAGATTTGTGGA +
Preference number: 3 (lower is better)
Translates to: AKVILVMFKQRD*RHFAPALEICG
Trigger: TCCACAAATCTCTAGGGCAGGGGCAAAATGCCGCCAATCTCTTTGCTTAAACATAACAAGAATCACCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATaGTTTTATCGAGGGTTTCCGCTTTTGCACCCTTCA +
Preference number: 3 (lower is better)
Translates to: VLMVVNMSHEIS*FYRGFPLLHPS
Trigger: TGAAGGGTGCAAAAGCGGAAACCCTCGATAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGGTAACAGGCAGAGGTaGGAACAGTTTGGAGGGCTC +
Preference number: 3 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDGNRQR*EQFGGL
Trigger: GAGCCCTCCAAACTGTTCCAACCTCTGCCTGTTACC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACGAGGGTTTCCGCTTTaGCACCCTTCATTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRGFPL*HPSFSL
Trigger: AAGAGAAAATGAAGGGTGCAAAAGCGGAAACCCTCG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GTAACTAACTTGCTTTTGATTTTACAGGCTCATAGGTaGAAGGGCCTTGCCTTGTCTCAGATTAGACTTTGG +
Preference number: 3 (lower is better)
Translates to: VTNLLLILQAHR*KGLALSQIRLW
Trigger: CCAAAGTCTAATCTGAGACAAGGCAAGGCCCTTCCACCTATGAGCCTGTAAAATCAAAAGCAAGTTAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp AGATTGGCGGCATTTTGCCCCTGCCCTAGAGATTTGTaGAACTTTGAACTTGAGAGAGATAATTTAGGGTAT +
Preference number: 3 (lower is better)
Translates to: RLAAFCPCPRDL*NFELERDNLGY
Trigger: ATACCCTAAATTATCTCTCTCAAGTTCAAAGTTCCACAAATCTCTAGGGCAGGGGCAAAATGCCGCCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp CATCTTGAATTGTACTCCCATAATTCTCACGTGTTGTaGGAGGGACCCAATGGGAAATATTTTGAATCATGG +
Preference number: 3 (lower is better)
Translates to: HLELYSHNSHVL*EGPNGKYFESW
Trigger: CCATGATTCAAAATATTTCCCATTGGGTCCCTCCCACAACACGTGAGAATTATGGGAGTACAATTCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR-3UTR CAA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACACCCAAATCTCATCTaGAACTGTACTCCCTTAATT +
Preference number: 3 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLHPNLI*NCTPLI
Trigger: AATTAAGGGAGTACAGTTCAAGATGAGATTTGGGTG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp GAATTCCATTTATTAACTTTATCAAAGTACAATACGTaGGGTCCTCATGATGCCAACAGCCAATGCCAGACT +
Preference number: 3 (lower is better)
Translates to: EFHLLTLSKYNT*GPHDANSQCQT
Trigger: AGTCTGGCATTGGCTGTTGGCATCATGAGGACCCCACGTATTGTACTTTGATAAAGTTAATAAATGGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR TCA 72 bp CACCCAGCTCTAACTGCCATATTATTTATCACCGCATaGTTTATAAAAGCCAGGTCCAGTAGAAAAACAGAT +
Preference number: 3 (lower is better)
Translates to: HPALTAILFITA*FIKARSSRKTD
Trigger: ATCTGTTTTTCTACTGGACCTGGCTTTTATAAATCATGCGGTGATAAATAATATGGCAGTTAGAGCTGGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR GCA 72 bp AATAAGAACATGTCCATGCAAAGGTACATGGGTCAATaGACCTTTAAAACTAAAACCAAAGAGGCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: NKNMSMQRYMGQ*TFKTKTKEASA
Trigger: AGCAGAAGCCTCTTTGGTTTTAGTTTTAAAGGTGCATTGACCCATGTACCTTTGCATGGACATGTTCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CCA 72 bp AAATGTGTAAGAATATTCAATCCCAAACTAGTAAACTaGGAAAAGGACATTCACAGGCAACTCACAAAAGGG +
Preference number: 3 (lower is better)
Translates to: KCVRIFNPKLVN*EKDIHRQLTKG
Trigger: CCCTTTTGTGAGTTGCCTGTGAATGTCCTTTTCCCAGTTTACTAGTTTGGGATTGAATATTCTTACACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGCTCCAGCTCCCGGGTaGGCGCCTCCAGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSAPAPG*APPAAA
Trigger: AGCGGCGGCTGGAGGCGCTCACCCGGGAGCTGGAGC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAGACCGGAGCGCGGGCTaGCGTGGCGCTGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPDRSAG*RGAGRS
Trigger: GCTACGACCAGCGCCACGGCAGCCCGCGCTCCGGTC...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACGAGGCTGGAAACGCTaGAGCGGGCGCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRGWKR*SGRCPP
Trigger: CGGTGGGCAGCGCCCGCTCCAGCGTTTCCAGCCTCG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp CCACTTCCCTGCGGGCGCCTCCTGGTGTTTGTTCCCTaGGGCTCGGCCTGGACAGCCCTGCTGGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PLPCGRLLVFVP*GSAWTALLVPG
Trigger: TCCGGGAACCAGCAGGGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCAGGAGGCGCCCGCAGGGAAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGCAAGTGGAAAGCTGGTaGTGGGGTGGGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGQVESW*WGGWEA
Trigger: TGCCTCCCACCCACCCCATCACCAGCTTTCCACTTG...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGTGTCGTGGAGCCCCTTaGCCCGCGCGCAGACACAGG +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVCRGAP*PARRHR
Trigger: CCTGTGTCTGCGCGCGGGGCAAGGGGCTCCACGACA...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGAGGGACCTCCACACTaGATTTCATGGGGCGACCGC +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGEGPPH*ISWGDR
Trigger: GCGGTCGCCCCATGAAATGCAGTGTGGAGGTCCCTC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGAGGGGAGCTATGCCCTaGAAAGCCACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGRGAMP*KATGVE
Trigger: CTCCACCCCTGTGGCTTTGCAGGGCATAGCTCCCCT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGTCACCTCGCACCCCTaGCCAAGGCAGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSVTSHP*PRQGPS
Trigger: AGAGGGCCCCTGCCTTGGCCAGGGGTGCGAGGTGAC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGAGCCCCCACCCAGGCTaGCTCCCAGAGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVSPHPG*LPESPI
Trigger: GATGGGGGACTCTGGGAGCCAGCCTGGGTGGGGGCT...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGTCTCCACGTCCACGGTaGAGGGAACCCCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVSPRPR*REPRPG
Trigger: GCCTGGACGGGGTTCCCTTCACCGTGGACGTGGAGA...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGGGGCCCGCAGGGAAGTaGCTTGAGCAGGCACAGACG +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVGPAGK*LEQAQT
Trigger: CGTCTGTGCCTGCTCAAGTCACTTCCCTGCGGGCCC...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACAGGCGGGCCCAAGCTaGAGAGCTCACCGCATAGCG +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPQAGPS*RAHRIA
Trigger: CGCTATGCGGTGAGCTCTTCAGCTTGGGCCCGCCTG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGGCTGGGTGGGAGGGATaGGCACAGCTGCACCCTACC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVAGWEG*AQLHPT
Trigger: GGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAGC...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGACGAGAAGTCCTGGCTaGGATCCACGCAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGTRSPG*DPRSSG
Trigger: TCCTGAGCTGCGTGGATCTCAGCCAGGACTTCTCGT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGAGCCATGTGGGAGGCTaGGGCCTCCCCAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVSHVGG*GLPSHV
Trigger: CACATGGCTGGGGAGGCCTCAGCCTCCCACATGGCT...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACGGAGGGAACTGCCATaGACAGCTCCGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRRELP*TAPGEE
Trigger: CTCCTCCCCCGGAGCTGTGCATGGCAGTTCCCTCCG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGCTCAGCCCACCAGGTaGCGCCCGCGCCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHAQPTR*RPRHAS
Trigger: CGAGGCATGGCGCGGGCGCCACCTGGTGGGCTGAGC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGTGAGCCTTTTCCACTaGTGGGTCAGGCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGVSLFH*WVRPQW
Trigger: CCACTGAGGCCTGACCCACCAGTGGAAAAGGCTCAC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGACAGTCCTGTCACCATaGCAGGGCAGGTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGTVLSP*QGRCVT
Trigger: GGTCACACACCTGCCCTGCCATGGTGACAGGACTGT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGGTGACCCCAGGCCATaGGTCCCGCTGAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSGDPRP*VPLRMP
Trigger: AGGCATCCTCAGCGGGACCCATGGCCTGGGGTCACC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGAAAGTGCCTTTTGGTaGGAGGCCTCCCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGESAFW*EASPAM
Trigger: CATGGCTGGGGAGGCCTCCCACCAAAAGGCACTTTC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGGTCGTAGCCCAGGCTaGTGCCGCTGGATCGGGCGC +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQGRSPG*CRWIGR
Trigger: GCGCCCGATCCAGCGGCATCAGCCTGGGCTACGACC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGGACGTGCACAGTGGGTaGGGGAAGAGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVDVHSG*GKRPRL
Trigger: CAACCTGGGCCTCTTCCCTCACCCACTGTGCACGTC...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACGAGACAGGACCCCGTaGTGGGGAAGGGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRDRTP*WGRAFS
Trigger: AGAGAAGGCCCTTCCCCATCACGGGGTCCTGTCTCG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGGCAGGGCAGGTGTGTaGCCCGGGCGGGTTCACGTG +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQGRAGV*PGRVHV
Trigger: CACGTGAACCCGCCCGGGTCACACACCTGCCCTGCC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGAAGACAAGGGGATGTaGCCGGGCAGACCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSEDKGM*PGRPSG
Trigger: CCCTGAGGGTCTGCCCGGTCACATCCCCTTGTCTTC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACACCCTGCCCGGGAGTaGGCTTTGCGAGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPHPARE*ALRGRG
Trigger: ACCCCGACCTCGCAAAGCGCACTCCCGGGCAGGGTG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACGGCCTGGACAGCCCTaGTGGTTCCCGGAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPRPGQP*WFPEPS
Trigger: GCTAGGCTCCGGGAACCAGCAGGGCTGTCCAGGCCG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGCCGCAGACACTCAATaGCAGCCCATGAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGAADTQ*QPMKEA
Trigger: GGCTTCTTTCATGGGCTGGCATTGAGTGTCTGCGGC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGGGCTTTCCTGAAGCGTaGCCAGGGCGCCCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVGFPEA*PGRPSH
Trigger: ATGAGAGGGGCGCCCTGGCCACGCTTCAGGAAAGCC...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGCAACCAGGCTGGACTTaGACCAGTGCAGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGQPGWT*TSAGGT
Trigger: AGTTCCACCTGCACTGGTCCAAGTCCAGCCTGGTTG...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCATTCACGTGCGCAGCGTaGAGAGGAGTGTGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPFTCAA*RGVCAG
Trigger: CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAA...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp GCTCACCGCATAGCGGGGACAGGGATGGCAGGAGACTaGCCACTCAGACCAGGGAAGGATGACAGGGACCCC +
Preference number: 4 (lower is better)
Translates to: AHRIAGTGMAGD*PLRPGKDDRDP
Trigger: GGGGTCCCTGTCATCCTTCCCTGGTCTGAGTGGCAAGTCTCCTGCCATCCCTGTCCCCGCTATGCGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCTGCTCAGAGCTCAGTaGCGTGCACAGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVLLRAQ*RAQWVR
Trigger: CCTCACCCACTGTGCACGTCACTGAGCTCTGAGCAG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCAGGCGGAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSRRRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTCCGCCT...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGGCCATGGGTCCCGCTaGGGATGCCTGGAAATCCGC +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPGHGSR*GCLEIR
Trigger: GCGGATTTCCAGGCATCCTCAGCGGGACCCATGGCC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTAGTAGTCCCGCGCCGTaGGCGCCTCGAGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRSSPAP*APRAPA
Trigger: AGCGGGCGCTCGAGGCGCGCACGGCGCGGGACTACT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCGTCCAGGCACTCATTaGACACGGAGCACCGGAAGC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVRPGTH*TRSTGS
Trigger: GCTTCCGGTGCTCCGTGTGCAATGAGTGCCTGGACG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGTCCAGGGCATGTCATTaGTCTTCCCATCACAGACCC +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGSRACH*SSHHRP
Trigger: GGGTCTGTGATGGGAAGACCAATGACATGCCCTGGA...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGCTCCAGCTCCCGGGTaGGCGCCTCCAGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQAPAPG*APPAAA
Trigger: AGCGGCGGCTGGAGGCGCTCACCCGGGAGCTGGAGC...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGAGACACAGGCTTTCCTaGAGCGTGGCCAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQRHRLS*SVARAP
Trigger: GGGCGCCCTGGCCACGCTTCAGGAAAGCCTGTGTCT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGGCATGAGAATTACTTaGACCCTGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGGMRIT*TLEAEV
Trigger: AACCTCTGCCTCCAGGGTTCAAGTAATTCTCATGCC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCTTCTGGGTGTCAAGTaGGGTGTCACAACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVLLGVK*GVTTGA
Trigger: GGCCCCAGTTGTGACACCTCACTTGACACCCAGAAG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCCTCAGTGGGGTCACTaGGAACCCACCAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVPQWGH*EPTKSS
Trigger: GGAGGATTTGGTGGGTTCTCAGTGACCCCACTGAGG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCATGCAGCTCAGCAAGCTaGCATCTGTGCTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPCSSAS*HLCFPP
Trigger: GGGTGGGAAGCACAGATGTCAGCTTGCTGAGCTGCA...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCTCCTGGCAGCCCTGTaGCACATGCCCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHLLAAL*HMPQVW
Trigger: CCAGACCTGGGGCATGTGTCACAGGGCTGCCAGGAG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCTTCCTCAGCAGGGCTaGTCACTATCAGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVLPQQG*SLSGMA
Trigger: GGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGATAAAGACTCCCCATTaGCTGGCACGCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVIKTPH*LARLLG
Trigger: GCCCAGCAGGCGTGCCAGGCAATGGGGAGTCTTTAT...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGCTCCCACCCAGCAATaGAGCCGGGTCACCTCGCAC +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHAPTQQ*SRVTSH
Trigger: GTGCGAGGTGACCCGGCTGCATTGCTGGGTGGGAGC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGGCAGTCATAGCTCCCTaGAGCCTGGAATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVAVIAP*SLESWP
Trigger: AGGCCAGGATTCCAGGCTGCAGGGAGCTATGACTGC...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCCAGCCTAGGACTTGCTaGCTTGTGTCCCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSQPRTC*LVSQPL
Trigger: GAGTGGCTGGGACACAAGGCAGCAAGTCCTAGGCTG...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACGCTGTGTAAGTCCCTaGCTAAGGCTCCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRCVSP*LRLPDH
Trigger: GTGGTCAGGGAGCCTTAGCCAGGGACTTACACAGCG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAGGAGAAGGACCGGGTTaGCAACAAGGAGAAACCCGG +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPGEGPG*QQGETR
Trigger: CCGGGTTTCTCCTTGTTGCCAACCCGGTCCTTCTCC...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACACAGGCCACTGGCATaGCTCAGCCCAGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPHRPLA*LSPVLT
Trigger: TGTGAGAACTGGGCTGAGCCATGCCAGTGGCCTGTG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCCCCCAGTCACCCTCTaGCCCACACTGCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQPPVTL*PTLLPT
Trigger: TGTGGGGAGCAGTGTGGGCCAGAGGGTGACTGGGGG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCCCAGCTGGCTCAGGTaGAGATGGAGGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQPSWLR*RWRLRD
Trigger: GTCCCGGAGCCTCCATCTCCACCTGAGCCAGCTGGG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCCAGGCTGGAGTGCAGTaGTGTGAACTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSQAGVQ*CELGSL
Trigger: CAGTGAGCCGAGTTCACACCACTGCACTCCAGCCTG...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACATGAAAGTGCCTTTTaGTGGGAGGCCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPHESAF*WEASPA
Trigger: GGCTGGGGAGGCCTCCCACCAAAAGGCACTTTCATG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCAGGAGCGTGCATGGTaGCCGGGATGGAGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQQERAW*PGWSRV
Trigger: AACCCTGCTCCATCCCGGTCACCATGCACGCTCCTG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGCGGATGAAGAAAGAATaGGGGCAGAGGGCACCCCAT +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVRMKKE*GQRAPH
Trigger: ATGGGGTGCCCTCTGCCCTCATTCTTTCTTCATCCG...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGGAAGATGCTGTGACTaGAAGAGAGCCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSGRCCD*KRAWWV
Trigger: GACCCACCAGGCTCTCTTTCAGTCACAGCATCTTCC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGAGTAGTCCCGCGCCGTaGGCGCCTCGAGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGSSPAP*APRAPA
Trigger: AGCGGGCGCTCGAGGCGCGCACGGCGCGGGACTACT...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGTGGGAGGCAGAGGTTaGAGTCAGCCCAGATCACGC +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPVGGRG*SQPRSR
Trigger: GCGTGATCTGGGCTGACTGCAACCTCTGCCTCCCAC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGTGGCCAGATGAGGGCTaGCAGACCGGACGAGACAGG +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQWPDEG*QTGRDR
Trigger: CCTGTCTCGTCCGGTCTGGCAGCCCTCATCTGGCCA...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACAGCCCTGTGACACATaGCCCAGGTCTGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPQPCDT*PRSGMV
Trigger: CACCATCCCAGACCTGGGGCATGTGTCACAGGGCTG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCATTACCCTGGCTGGAGTaGACTGGCAGTCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPLPWLE*TGSHSS
Trigger: GGAGCTATGACTGCCAGTGCACTCCAGCCAGGGTAA...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACAGACAGCAGCTCGGTaGGAAACTGATTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPQTAAR*ETDWRE
Trigger: CTCCCTCCAATCAGTTTCCCACCGAGCTGCTGTCTG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCCTGCGGGCGCCTCCTaGTGTTTGTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHPAGAS*CLFPWA
Trigger: AGCCCAAGGGAACAAACACCAGGAGGCGCCCGCAGG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCACCCCTCCCGAGTGTaGCACCGGAAGTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHHPSRV*HRKSLL
Trigger: CAGCAAGGACTTCCGGTGCCACACTCGGGAGGGGTG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACTCAGGGCCAGGGAAGTaGGTGGAAGGAGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHSGPGK*VEGEEP
Trigger: CGGCTCCTCTCCTTCCACCCACTTCCCTGGCCCTGA...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGGCCCTATGCCCTCCTaGCAGCCCTGTGACACATGC +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHGPMPS*QPCDTC
Trigger: GCATGTGTCACAGGGCTGCCAGGAGGGCATAGGGCC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGTCCCTGGGGAATCCTTaGGCCCTATGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQSLGNP*ALCPPG
Trigger: GCCAGGAGGGCATAGGGCCCAAGGATTCCCCAGGGA...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACCGCATCAACCCAGCTaGCTCAGGTGGAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPPHQPS*LRWRWR
Trigger: CCTCCATCTCCACCTGAGCCAGCTGGGTTGATGCGG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCGGTGGAGAGTAGCGTaGGCCACCAGGCGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRRWRVA*ATRRAQ
Trigger: TTGGGCCCGCCTGGTGGCTCACGCTACTCTCCACCG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTTGGCACGATCTCGGCTaGCTGCAACCTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRWHDLG*LQPPPP
Trigger: GGGAGGCGGAGGTTGCAGTCAGCCGAGATCGTGCCA...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGACTTGCCCAGGGCCTaGAGGATCATTTCCATGATG +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSDLPRA*RIISMM
Trigger: CATCATGGAAATGATCCTGCAGGCCCTGGGCAAGTC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAATCCTTGGGCCCTATaGCCTCCTGGCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHNPWAL*PPGSPV
Trigger: CACAGGGCTGCCAGGAGGGCATAGGGCCCAAGGATT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAAAAGAGGCTTCTGCTTaGATAGGGTGGACTGGGACC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPKEASA*IGWTGT
Trigger: GGTCCCAGTCCACCCTATGCAAGCAGAAGCCTCTTT...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCATGGACACCACACGGATaGTTGTCTCGCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPWTPHG*LSRSPV
Trigger: CACAGGGCTGCGAGACAACCATCCGTGTGGTGTCCA...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGGAAGAGGCCCAGGTTaGAGGCGCCGCAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRGRGPG*RRRRWQ
Trigger: TTGCCACCTGCGGCGCCTCCAACCTGGGCCTCTTCC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGGTGGCATCCAGGGCTaGAGGGTCACAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRGGIQG*RVTGHW
Trigger: CCAGTGGCCTGTGACCCTCCAGCCCTGGATGCCACC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAAGCCTTTTCCACTGGTaGGTCAGGCCTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPSLFHW*VRPQWG
Trigger: ACCCCACTGAGGCCTGACCCACCAGTGGAAAAGGCT...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGCCCCAGGTCTGGGATaGTGGCCCAGCAATGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRAPGLG*WPSNAL
Trigger: GAGGGCATTGCTGGGCCACCATCCCAGACCTGGGGC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCATGCCAAGCCCACACTTaGTGCAAATGCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPCQAHT*CKCRSS
Trigger: ACTACTTCGGCATTTGCATCAAGTGTGGGCTTGGCA...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTCTGGCTAAGGCTCCCTaGCCACCCCTGTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRLAKAP*PPLYLP
Trigger: CGGCAAGTACAGGGGTGGTCAGGGAGCCTTAGCCAG...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGGGACAGCTTTGCAACTaGCCAGTTAGAAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVGQLCN*PVRRQR
Trigger: CCTTTGCCTTCTAACTGGTCAGTTGCAAAGCTGTCC...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAGAAACCATGAGCATCTaGACACGCGGAGTGCACATT +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPETMSI*TRGVHI
Trigger: AATGTGCACTCCGCGTGTTCAGATGCTCATGGTTTC...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACGCGCCCGGCCAGGCTaGACACAATTATTAAATGAA +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRARPG*TQLLNE
Trigger: TTCATTTAATAATTGTGTTCAGCCTGGCCGGGCGCG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGATGTCCACACACGCTaGATTTGTCGGCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPDVHTR*ICRPSA
Trigger: AGCAGACGGCCGACAAATGCAGCGTGTGTGGACATC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGGACGGGTTTTCCCCTaGTCAGAGCTCAGTGACGTG +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQGRVFP*SELSDV
Trigger: CACGTCACTGAGCTCTGAGCAGGGGAAAACCCGTCC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTCAGCTGGCAGGAGCGTaGATGGTGACCGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRQLAGA*MVTGME
Trigger: CTCCATCCCGGTCACCATGCACGCTCCTGCCAGCTG...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACTCACCCAGGCTGGAGTaGAGTGGTGTGAACTCGGCT +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHSPRLE*SGVNSA
Trigger: AGCCGAGTTCACACCACTGCACTCCAGCCTGGGTGA...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCCAGGAACCCTTGGCCTaGCATTTTCATGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSQEPLA*HFHVQV
Trigger: GACCTGAACATGAAAATGGCAGGCCAAGGGTTCCTG...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCTACAGGAAGTCCTCCTaGCAGTACACTTTCTCACCC +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSYRKSS*QYTFSP
Trigger: GGGTGAGAAAGTGTACTGCCAGGAGGACTTCCTGTA...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTATGCCTCGGCCCTGCTaGACTCCGAAGCCGCCACTT +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRMPRPC*TPKPPL
Trigger: AAGTGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCAT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGAGGGACGAGAAGTCCTaGCTGAGATCCACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQRDEKS*LRSTQL
Trigger: GAGCTGCGTGGATCTCAGCCAGGACTTCTCGTCCCT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCTTACAGGCTCATAGGTaGAAGGGCCTTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSLQAHR*KGLALS
Trigger: AGACAAGGCAAGGCCCTTCCACCTATGAGCCTGTAA...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACTTGTACAAGGTGCCTaGAAAAGCCGCAGACACTCA +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPLVQGA*KSRRHS
Trigger: TGAGTGTCTGCGGCTTTTCCAGGCACCTTGTACAAG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGTCTCCACGTCCACGGTaGAGGGAACCCCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGSPRPR*REPRPG
Trigger: GCCTGGACGGGGTTCCCTTCACCGTGGACGTGGAGA...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR TCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTTCTCCCAGGGGCGAGTaGCTTCAGTCCAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRSPRGE*LQSRCP
Trigger: GGGACATCTGGACTGAAGTCACTCGCCCCTGGGAGA...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCACAGAACTCACACCTaGCGGTGGGGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRHRTHT*RWGRKG
Trigger: CCCCTTCCTCCCCCACCGTCAGGTGTGAGTTCTGTG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGCCCAGCCCCGCGAGTaGTTCACAGAACTCACACCT +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRAQPRE*FTELTP
Trigger: AGGTGTGAGTTCTGTGAATCACTCGCGGGGCTGGGC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGGCCCCTGGTCCTGCTaGAGGCCCCACTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRGPWSC*RPHSKM
Trigger: CATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGCC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGGCCATGCCTCGGCCCTaGTGGACTCCGAAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQAMPRP*WTPKPP
Trigger: TGGCGGCTTCGGAGTCCAGCAGGGCCGAGGCATGGC...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTGTGGCGCCCGCGCCATaGCTCGGCCCTGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRVAPAP*LGPAGL
Trigger: GAGTCCAGCAGGGCCGAGGCATGGCGCGGGCGCCAC...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGGCTTGTCTGGGGATTaGAGGGAGCACTCACGCCCA +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRGLSGD*REHSRP
Trigger: TGGGCGTGAGTGCTCCCTGCAATCCCCAGACAAGCC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGAGACTCCCCATTGCCTaGCACGCCTGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGRLPIA*HACWAP
Trigger: CGGAGCCCAGCAGGCGTGCCAGGCAATGGGGAGTCT...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTTGTCCCCTGAACCCCTaGGGATTCCGCATCAGGACC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRCPLNP*GFRIRT
Trigger: GGTCCTGATGCGGAATCCCCAGGGGTTCAGGGGACA...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCTGGACTTTACTCTCTaGCCCCAGTGGGATCACCTC +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHLDFTL*PQWDHL
Trigger: GAGGTGATCCCACTGGGGCCAGAGAGTAAAGTCCAG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTAGAAAGGGCAGAGTGTaGCCTGGTGAGGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRRKGRV*PGEATA
Trigger: GGCAGTGGCCTCACCAGGCCACACTCTGCCCTTTCT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGTGGAGATACTGCTGTTaGCAAATGAGCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVWRYCC*QMSLES
Trigger: GCTCTCCAAGCTCATTTGCCAACAGCAGTATCTCCA...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTCAGAGACCACATCAGTaGGGGTCCCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRQRPHQ*GSPWAG
Trigger: ACCTGCCCAAGGGGACCCCCACTGATGTGGTCTCTG...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACCACGTGGACAGCGCTTaGCCCTTTATGTACCCACTG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHHVDSA*PFMYPL
Trigger: CAGTGGGTACATAAAGGGCCAAGCGCTGTCCACGTG...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGCGTCAGGGCTCTGTTaGTCTCGCTCCAGTTCAATC +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQASGLC*SRSSSI
Trigger: GATTGAACTGGAGCGAGACCAACAGAGCCCTGACGC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAAAGAGCAGTTCCACTTaGGATTGTCATGGTACCTGC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPKSSST*DCHGTC
Trigger: GCAGGTACCATGACAATCCCAAGTGGAACTGCTCTT...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGGGGTTTCGCCATGTTaGCCAGGATTGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPGVSPC*PGLSRT
Trigger: AGTTCGAGACAATCCTGGCCAACATGGCGAAACCCC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAAGACACAGATTCAACTaGCATCCAAAGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPRHRFN*HPKGTV
Trigger: GACTGTCCCCTTTGGATGCCAGTTGAATCTGTGTCT...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGACCAGCTACAGAGGCTaGGAATCAGGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQTSYRG*ESGSAP
Trigger: TGGAGCAGAGCCTGATTCCCAGCCTCTGTAGCTGGT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTTGGAGTCGGCCATCCTaGCCTCATCTCCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRWSRPS*PHLQGP
Trigger: AGGACCCTGGAGATGAGGCCAGGATGGCCGACTCCA...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAGCCTCCCCAGCCATGTaGGAGGCTGAGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGASPAM*EAEASP
Trigger: TGGGGAGGCCTCAGCCTCCCACATGGCTGGGGAGGC...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAAAAGGCAGGAACCCTTaGCCTGCCATTTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPKGRNP*PAIFMF
Trigger: GAACATGAAAATGGCAGGCCAAGGGTTCCTGCCTTT...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp AGGACTTGCTGCCTTGTGTCCCAGCCACTCCAGCCATaGCTAAAAGGGGCCAAGGTACAGCTCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RTCCLVSQPLQP*LKGAKVQLSPW
Trigger: CCATGGGCTGAGCTGTACCTTGGCCCCTTTTAGCAATGGCTGGAGTGGCTGGGACACAAGGCAGCAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAGTGGCCACCAGCCCTaGCAGAAGGCAATGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGSGHQP*QKAMRG
Trigger: GCCCCGCATTGCCTTCTGTCAGGGCTGGTGGCCACT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGGAGGAAGATGCTGTaGCTGAAAGAGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHRRKML*LKESLV
Trigger: CACCAGGCTCTCTTTCAGTCACAGCATCTTCCTCCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGTGTCTCGCAGCCCTGTaGAGGGAGGATAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGCLAAL*REDRTG
Trigger: GCCCGTCCTATCCTCCCTGCACAGGGCTGCGAGACA...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGCGTGGAGAGGAGTGTaGGCTGGGTGTAGGACAATG +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRAWRGV*AGCRTM
Trigger: CATTGTCCTACACCCAGCGCACACTCCTCTCCACGC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGATAAGAACATGTCCATaGAAAGGTACATGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGIRTCP*KGTWVN
Trigger: ATTGACCCATGTACCTTTGCATGGACATGTTCTTAT...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGTGCAGCCTAGGACTTaGTGCCTTGTGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRVQPRT*CLVSQP
Trigger: TGGCTGGGACACAAGGCAGCAAGTCCTAGGCTGCAC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAGAGGGTTTCCGCTTTTaGACCCTTCATTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPEGFRF*TLHFLL
Trigger: CAAGAGAAAATGAAGGGTGCAAAAGCGGAAACCCTC...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGGCAAGGTGGCCATGTaGATCCAAAGGCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRGKVAM*IQRQEP
Trigger: GGGTTCCTGCCTTTGGATGCACATGGCCACCTTGCC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGATGCCAACAGCCAATaGCAGACTCAAGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHDANSQ*QTQGGV
Trigger: GACTCCACCTTGAGTCTGGCATTGGCTGTTGGCATC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCAGGGGGCCTCCAAGTaGAAAGCTGGTGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRQGASK*KAGDGV
Trigger: CACCCCATCACCAGCTTTCCACTTGGAGGCCCCCTG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGTGGTGTTTGTTCCCTTaGGCTCGGCCTGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRWCLFP*ARPGQP
Trigger: GGGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCA...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAAGAGGCCAAGACTTCTaGGTGTCAAGTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPRGQDF*VSSEVS
Trigger: TGACACCTCACTTGACACCCAGAAGTCTTGGCCTCT...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACCCCTGGGCATGAAATaGAGATACTGCTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPPLGMK*RYCCWQ
Trigger: TTGCCAACAGCAGTATCTCCATTTCATGCCCAGGGG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAACCCCAAGGTTCTCCTaGGCCCCACAGGCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGTPRFS*APQAAP
Trigger: AGGCGCAGCCTGTGGGGCCCAGGAGAACCTTGGGGT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGCTGAAGCCGTAGGATaGATTGAAATCTGTGCATCA +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSAEAVG*IEICAS
Trigger: TGATGCACAGATTTCAATCCATCCTACGGCTTCAGC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGTTGCATAGGGTGGACTaGGACCTTCACTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQLHRVD*DLHSCP
Trigger: GGGACATGAGTGAAGGTCCCAGTCCACCCTATGCAA...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGGTCCAGGCTGATGTaGTCTCAGATGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHRSRLM*SQMEMR
Trigger: CCTCATCTCCATCTGAGACCACATCAGCCTGGACCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGGAATATAGGAAAATGTaGGAAAGTTTGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGEYRKM*ESLEPP
Trigger: AGGAGGTTCCAAACTTTCCCACATTTTCCTATATTC...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp CCAGACTCAAGGTGGAGTCTGACCCTGACCTGCCTCTaGGCCTTCCCATTAGAGCCAGGAGAAAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PDSRWSLTLTCL*AFPLEPGEKQH
Trigger: GTGCTGCTTTTCTCCTGGCTCTAATGGGAAGGCCAAGAGGCAGGTCAGGGTCAGACTCCACCTTGAGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAAGCAGGCACAGACGGTaGATAAATAGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPSRHRR*INRSFH
Trigger: GTGGAAGCTTCTATTTATTCACCGTCTGTGCCTGCT...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACACCTGGCCAACATGCTaGAACCCCCTCTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHTWPTC*NPLSTK
Trigger: TTTAGTTGAGAGGGGGTTTCAGCATGTTGGCCAGGT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGTCACTTACAGGAGGTaGGCCTTTTCCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRVTYRR*AFSTGG
Trigger: CCCACCAGTGGAAAAGGCTCACCTCCTGTAAGTGAC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGATTTCAGAAGATGTATaGAAATGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVISEDV*KCLDAQ
Trigger: CTGGGCATCCAGGCATTTTCATACATCTTCTGAAAT...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGCGTCCAGGCACTCATTaGACACGGAGCACCGGAAGC +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQRPGTH*TRSTGS
Trigger: GCTTCCGGTGCTCCGTGTGCAATGAGTGCCTGGACG...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATGTCTCGCAGCCCTGTaGAGGGAGGATAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGCLAAL*REDRTG
Trigger: GCCCGTCCTATCCTCCCTGCACAGGGCTGCGAGACA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTCCAGACCACACCCTaGCCGGGAGTGCGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQFQTTP*PGVRFA
Trigger: CGCAAAGCGCACTCCCGGGCAGGGTGTGGTCTGGAA...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCCTGGAGGCAGAGGTTaGAGTAGGCCCAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRPGGRG*SRPRLC
Trigger: GCACAATCTGGGCCTACTGCAACCTCTGCCTCCAGG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCCTTCTCTCGGCCTCTaGTCACGAGCTAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRPSLGL*SRARDQ
Trigger: CTGGTCTCTAGCTCGTGAGCAGAGGCCGAGAGAAGG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAGGAGGGTGAGTAAATaGCAGGCCCGGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGRRVSK*QARSRA
Trigger: GGCCCTGGACCGGGCCTGGCATTTACTCACCCTCCT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCATTAAAAGGTTTGGCCTaGACCCTCAGTGCACACTGT +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPLKGLA*TLSAHC
Trigger: ACAGTGTGCACTGAGGGTGCAGGCCAAACCTTTTAA...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCGTGAACCACCGTGCCTaGCTGTTAACTAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSVNHRA*LLTSFI
Trigger: AATAAAACTAGTTAACAGCCAGGCACGGTGGTTCAC...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGAAGCAGCTAAGGGGTTaGAGTCGGCCATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRKQLRG*SRPSWP
Trigger: AGGCCAGGATGGCCGACTCCAACCCCTTAGCTGCTT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACTGCAGAAGGGAAATGTaGGGTCAGAGCCCAAACACA +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHCRREM*GQSPNT
Trigger: TGTGTTTGGGCTCTGACCCCACATTTCCCTTCTGCA...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCATTTAAGCAAAGAGATTaGCGGCATTTTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPFKQRD*RHFAPA
Trigger: GGCAGGGGCAAAATGCCGCCAATCTCTTTGCTTAAA...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAGAACTTGTTGGGAACTaGAGCAAAGGTGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPELVGN*SKGDSC
Trigger: ACAAGAATCACCTTTGCTCCAGTTCCCAACAAGTTC...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGATGGGAACACTGCTTaGCACAGATGTTCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHDGNTA*HRCSSG
Trigger: CCCACTAGAACATCTGTGCCAAGCAGTGTTCCCATC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp TGGCACATGCAAAGGAAGGGGAGGAGAAGGACCGGGTaGGCAACAAGGAGAAACCCGGCTCAAAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: WHMQRKGRRRTG*ATRRNPAQSRF
Trigger: AAACCTGCTTTGAGCCGGGTTTCTCCTTGTTGCCAACCCGGTCCTTCTCCTCCCCTTCCTTTGCATGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGAGCCGTAGGATGGATTaGAATCTGTGCATCATTTAT +
Preference number: 4 (lower is better)
Translates to: APGPAEGPTLRCSALHAVSRRMD*NLCIIY
Trigger: ATAAATGATGCACAGATTTCAATCCATCCTACGGCT...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCTCTTGCCGCCACCATaGAAGTGCCTTTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRLLPPP*KCLLVG
Trigger: TCCCACCAAAAGGCACTTTCATGGTGGCGGCAAGAG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGTACGTGGGGTCCTCATaGTGCCAACAGCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRYVGSS*CQQPMP
Trigger: TGGCATTGGCTGTTGGCATCATGAGGACCCCACGTA...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGATAAAGACTCCCCATTaGCTGGCACGCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGIKTPH*LARLLG
Trigger: GCCCAGCAGGCGTGCCAGGCAATGGGGAGTCTTTAT...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGCATTTGTCGGCCGTCTaGTGGAACCCGGAGTACAGG +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGHLSAV*WNPEYR
Trigger: CCTGTACTCCGGGTTCCAGCAGACGGCCGACAAATG...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTTCCTCCCCGCTCAGCTaGAGCCCGCAGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRSSPLS*SPQSSQ
Trigger: CTGTGAGGACTGCGGGCTGCAGCTGAGCGGGGAGGA...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAGGCCCCACTCTAAGATaGAGCGCTCTCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITGPTLR*SALHAV
Trigger: CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCC...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCATGAAATGGAGATACTaGTGTTGGCAAATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSMKWRY*CWQMSL
Trigger: CAAGCTCATTTGCCAACAGCAGTATCTCCATTTCAT...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGTGAACTCGGCTCACTaGAACCTCAGTCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRVNSAH*NLSLPS
Trigger: ACTGGGGAGACTGAGGTTGCAGTGAGCCGAGTTCAC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCCTCTGCTAGGGCAGTaGAGAAGGGAAATGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRPLLGQ*RREMWG
Trigger: ACCCCACATTTCCCTTCTGCACTGCCCTAGCAGAGG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTAGACTCCCCATTGCCTaGCACGCCTGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRRLPIA*HACWAP
Trigger: CGGAGCCCAGCAGGCGTGCCAGGCAATGGGGAGTCT...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGTTGTCGGCCGTCTGCTaGAACCCGGAGTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGLSAVC*NPEYRK
Trigger: CTTCCTGTACTCCGGGTTCCAGCAGACGGCCGACAA...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGTGGACACCACACGGATaGTTGTCTCGCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGWTPHG*LSRSPV
Trigger: CACAGGGCTGCGAGACAACCATCCGTGTGGTGTCCA...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACCCGGGAGCCGAGGCTaGAAACGCTGGAGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLPGSRG*KRWSGR
Trigger: GCGCCCGCTCCAGCGTTTCCAGCCTCGGCTCCCGGG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCTAAAGTCTGAAAGGTaGACACGCGTGGCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQLKSER*TRVAKF
Trigger: AAACTTCGCCACGCGTGTCCACCTTTCAGACTTTAG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCCTGGACAGCCCTGCTaGTTCCCGGAGCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRPGQPC*FPEPSP
Trigger: TGGGCTAGGCTCCGGGAACCAGCAGGGCTGTCCAGG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAACCGGAAGTCCTTGCTaGCCTCCTGGCCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITTGSPC*PPGQMR
Trigger: CCTCATCTGGCCAGGAGGCCAGCAAGGACTTCCGGT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTGGCCAGGGAAGTGGGTaGAAGGAGAGGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRGQGSG*KERSRV
Trigger: GACGCGGCTCCTCTCCTTCCACCCACTTCCCTGGCC...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCAACTAATACAGTAAATTaGTACTGGGAGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPTNTVN*YWEWGV
Trigger: AACACCCCACTCCCAGTACCAATTTACTGTATTAGT...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGAATTCTCACGTGTTGTaGGAGGGACCCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQNSHVL*EGPNGK
Trigger: TTTCCCATTGGGTCCCTCCCACAACACGTGAGAATT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp TCACGCCCACATAGGATGTGTCCACGTGGACAGCGCTaGGCCCTTTATGTACCCACTGTGGATCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: SRPHRMCPRGQR*ALYVPTVDPSL
Trigger: TAGTGAAGGATCCACAGTGGGTACATAAAGGGCCAAGCGCTGTCCACGTGGACACATCCTATGTGGGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTTGTCACCCCTGGGCATaGAATGGAGATACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRCHPWA*NGDTAV
Trigger: AACAGCAGTATCTCCATTTCATGCCCAGGGGTGACA...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATGTCCTGTGTGCCTGTaGCAGGTCCCAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGCPVCL*QVPMAG
Trigger: TCCTGCCATTGGGACCTGTCACAGGCACACAGGACA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGATGTCCACACACGCTaGATTTGTCGGCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQDVHTR*ICRPSA
Trigger: AGCAGACGGCCGACAAATGCAGCGTGTGTGGACATC...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAAGGGGGCAGCGGGAGTaGAGGCAGCGGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRGQRE*RQREGS
Trigger: GCTCCCTTCCCGCTGCCTGCACTCCCGCTGCCCCCT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCCCACCAGCAGGAACTaGGCTAGGAGATGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQPTSRN*ARRCRN
Trigger: GTTCCTGCATCTCCTAGCGCAGTTCCTGCTGGTGGG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTAAGCCGCCACTTCCCTaGGGGCGCCTCCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRKPPLP*GRLLVF
Trigger: AAACACCAGGAGGCGCCCGCAGGGAAGTGGCGGCTT...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAGGATGGCAGGAGACTTaGCACTCAGACCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITGWQET*HSDQGR
Trigger: CCTTCCCTGGTCTGAGTGGCAAGTCTCCTGCCATCC...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTAACCAAAGAGGCTTCTaGTTGCATAGGGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRNQRGF*LHRVDW
Trigger: CCAGTCCACCCTATGCAAGCAGAAGCCTCTTTGGTT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCCAGCAGGGGAGCTATaGCCTGCAAAGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRPAGEL*PAKPQG
Trigger: CCCCTGTGGCTTTGCAGGGCATAGCTCCCCTGCTGG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTGGGGGCTGGCATCCCTaGGGAATCCTTGGGCCCTAT +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRGGWHP*GILGPY
Trigger: ATAGGGCCCAAGGATTCCCCAGGGATGCCAGCCCCC...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCCCGCTGAGGATGCCTaGAAATCCGCATCAACCCAG +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQPAEDA*KSASTQ
Trigger: CTGGGTTGATGCGGATTTCCAGGCATCCTCAGCGGG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAAATTGGTACTGGGAGTaGGGTGTTGCTGAAAACATA +
Preference number: 4 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPNWYWE*GVAENI
Trigger: TATGTTTTCAGCAACACCCCACTCCCAGTACCAATT...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp GGCAAGGTGGCCATGTGCATCCAAAGGCAGGAACCCTaGGCCTGCCATTTTCATGTTCAGGTCTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: GKVAMCIQRQEP*ACHFHVQVLIL
Trigger: AAGGATCAAGACCTGAACATGAAAATGGCAGGCCAAGGGTTCCTGCCTTTGGATGCACATGGCCACCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACACTACCCTAAAGTCTaGAAGGTGGACACGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGHYPKV*KVDTRG
Trigger: GCCACGCGTGTCCACCTTTCAGACTTTAGGGTAGTG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAACTGCTGTTGGCAAATaGGCTTGGAGAGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGTAVGK*AWRAEA
Trigger: GGCCTCTGCTCTCCAAGCTCATTTGCCAACAGCAGT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTTCTATGTCTCTGAGCTaGGCCCCGCTGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRSMSLS*APLRGR
Trigger: CCTGCCTCTCAGCGGGGCTCAGCTCAGAGACATAGA...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGACTTGCCCAGGGCCTaGAGGATCATTTCCATGATG +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQDLPRA*RIISMM
Trigger: CATCATGGAAATGATCCTGCAGGCCCTGGGCAAGTC...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGGAGGCGCATTTTGGTaGAAAAACCGTGTGATAGTC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRGGAFW*KNRVIV
Trigger: GACTATCACACGGTTTTTGCACCAAAATGCGCCTCC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGACCTCTTCCAGGGGGTaGAGATCACTCACAGTGGTA +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGTSSRG*RSLTVV
Trigger: TACCACTGTGAGTGATCTGCACCCCCTGGAAGAGGT...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAACTGCGCTAGGAGATaGAGGAACACCCATGTCCCC +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGNCARR*RNTHVP
Trigger: GGGGACATGGGTGTTCCTGCATCTCCTAGCGCAGTT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACTGGGAATCAGGCTCTaGTCCAGGAGATGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITLGIRL*SRRCVG
Trigger: TCCCACACATCTCCTGGAGCAGAGCCTGATTCCCAG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGAGATTGGCGGCATTTTaGCCCTGCCCTAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRRLAAF*PCPRDL
Trigger: CAAATCTCTAGGGCAGGGGCAAAATGCCGCCAATCT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGAAGCCCATGGCCAATaGATGCAAAAGATTCTCATT +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQEAHGQ*MQKILI
Trigger: AATGAGAATCTTTTGCATGCATTGGCCATGGGCTTC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATGTGACAGGTCCCAATaGCAGGAACTTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGCDRSQ*QELQAG
Trigger: CCCTGCCTGAAGTTCCTGCCATTGGGACCTGTCACA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTAAGCAACTTTGGAACTaGGTAACAGGCAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRKQLWN*VTGRGW
Trigger: CCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGTGCCAAGCCCACACTTaGTGCAAATGCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQCQAHT*CKCRSS
Trigger: ACTACTTCGGCATTTGCATCAAGTGTGGGCTTGGCA...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR TCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGCACACGAGTCGCAGGTaGAGCAGTCAGTGTGATAAA +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQHTSRR*SSQCDK
Trigger: TTTATCACACTGACTGCTTCACCTGCGACTCGTGTG...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR TCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCGCAGGGAAGTGACTTaGGCAGGCACAGACGGTGAA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRRREVT*AGTDGE
Trigger: TTCACCGTCTGTGCCTGCTCAAGTCACTTCCCTGCG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAGCCTATGCAGTCCCTTaGCTGCGACCTTTGACAAAG +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITAYAVP*LRPLTK
Trigger: CTTTGTCAAAGGTCGCAGTCAAGGGACTGCATAGGC...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCTCAATGCCAGCCCATaGAAGAAGCCAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRLNASP*KKPAGE
Trigger: CTCCCCTGCTGGCTTCTTTCATGGGCTGGCATTGAG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACTCTCCCTCTCTCTCTaGAGCTTATCCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGLSLSL*SLSCLR
Trigger: ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACATGCTCCCCACACCTCTaGCCAGGTCTCATAAATCCT +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITCSPHL*PGLINP
Trigger: AGGATTTATGAGACCTGGGCAGAGGTGTGGGGAGCA...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTAGGGATGAGCACAGCTaGACCCTACCCAACTCACCC +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRRDEHS*TLPNSP
Trigger: GGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCT...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGAGTCTGACCCTGACCTaGCTCTTGGCCTTCCCATTA +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQSLTLT*LLAFPL
Trigger: TAATGGGAAGGCCAAGAGGCAGGTCAGGGTCAGACT...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGTACAGGAAGTCCTCCTaGCAGTACACTTTCTCACCC +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQYRKSS*QYTFSP
Trigger: GGGTGAGAAAGTGTACTGCCAGGAGGACTTCCTGTA...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGGTCCAGGGACGGGCTaGGACTCCCAGCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLGPGTG*DSQPQS
Trigger: AGATTGGGGCTGGGAGTCCCAGCCCGTCCCTGGACC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATGGAGCAGGGTTCAGTaGAGCAACCCCATGGATATA +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGWSRVQ*SNPMDI
Trigger: TATATCCATGGGGTTGCTTCACTGAACCCTGCTCCA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCTCGGGCTTCCTCTGTaGAATAACCCAACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQLGLPL*NNPTAS
Trigger: AGAAGCTGTTGGGTTATTTCACAGAGGAAGCCCGAG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGAATGGTATTTTCCTATaGTTGATGGGAACACTGCTT +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQNGIFL*LMGTLL
Trigger: AAGCAGTGTTCCCATCAATCATAGGAAAATACCATT...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGAGGCGCATTTTGGTaGAAAAACCGTGTGATAGTC +
Preference number: 4 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQGGAFW*KNRVIV
Trigger: GACTATCACACGGTTTTTGCACCAAAATGCGCCTCC...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCAGAGCTCAGTGACGTaGACAGTGGGTGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRQSSVT*TVGEGR
Trigger: TCTTCCCTCACCCACTGTGCACGTCACTGAGCTCTG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTTTCAAGCGATTCTCGTaGCTCAGCCTCCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRFKRFS*LSLLPS
Trigger: ACTGGGGAGGAGGCTGAGGCACGAGAATCGCTTGAA...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGGTACATGGGTCAATaGACCTTTAAAACTAAAACC +
Preference number: 4 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHRYMGQ*TFKTKT
Trigger: GGTTTTAGTTTTAAAGGTGCATTGACCCATGTACCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGACAGGAGGCGCATTTTaGTGCAAAAACCGTGTGATA +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRTGGAF*CKNRVI
Trigger: TATCACACGGTTTTTGCACCAAAATGCGCCTCCTGT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATGGAGGCGCCGCAGGTaGCAACGACGACACAGTAGG +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLWRRRR*QRRHSR
Trigger: CCTACTGTGTCGTCGTTGCCACCTGCGGCGCCTCCA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGAGCAGGGCGGCAACTaGGGCCGCAAACACCCATCA +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLEQGGN*GRKHPS
Trigger: TGATGGGTGTTTGCGGCCCCAGTTGCCGCCCTGCTC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACGGAGCCTCCACGCCTaGACTTTACTCTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRSLHA*TLLSGP
Trigger: GGGGCCAGAGAGTAAAGTCCAGGCGTGGAGGCTCCG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCTCCGGGGGAGGAGGTaGAGCAGTGGCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDLRGRR*SSGHQP
Trigger: GGGCTGGTGGCCACTGCTCCACCTCCTCCCCCGGAG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCACTTGGGATTGTCATaGTACCTGCAGCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQHLGLS*YLQLSK
Trigger: CTTGCTGAGCTGCAGGTACCATGACAATCCCAAGTG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACCAGGTCTGGGATGGTaGCCCAGCAATGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLPGLGW*PSNALR
Trigger: CCTGAGGGCATTGCTGGGCCACCATCCCAGACCTGG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCCATATTGGTCAGGTTaGTCTCAAACTCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQPYWSG*SQTPDL
Trigger: GAGGTCGGGAGTTTGAGACCAACCTGACCAATATGG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGCTTGGATATGAGACATaGAGTCAAAGGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQLGYET*SQRKSL
Trigger: AAGTGATTTCCTTTGACTCCATGTCTCATATCCAAG...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCGGGGGCCAGGCCCCTaGACAACAGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDRGPGP*TTDSSS
Trigger: GGAGCTGCTGTCTGTTGTTCAGGGGCCTGGCCCCCG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACTTGACTGCGACCTTTaGCAAAGTGTGTTACTTGGG +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGLDCDL*QSVLLG
Trigger: CCCAAGTAACACACTTTGTCAAAGGTCGCAGTCAAG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGGGTTAATGCTGAAATaGGTTAAGAATTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRGLMLK*VKNLGD
Trigger: GTCCCCCAAATTCTTAACTCATTTCAGCATTAACCC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTGAACTGGAGCAAAGGTaGTTCTTGTTATGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRELEQR*FLLCLS
Trigger: GCTTAAACATAACAAGAATCACCTTTGCTCCAGTTC...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGACAGGAGGCGCATTTTaGTGCAAAAACCGTGTGATA +
Preference number: 4 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGTGGAF*CKNRVI
Trigger: TATCACACGGTTTTTGCACCAAAATGCGCCTCCTGT...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCCAAGCCAGGAGCCCTaGAAGAGGGAGCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDPSQEP*KREQGG
Trigger: GCCGCCCTGCTCCCTCTTCCAGGGCTCCTGGCTTGG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGGTAATCCCAGAACTTTaGAAGGTCAAGGCGGATGGA +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQVIPEL*KVKADG
Trigger: TCCATCCGCCTTGACCTTCCAAAGTTCTGGGATTAC...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATGGCTCAGGTGGAGATaGAGGCTCCGGGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLWLRWR*RLRDSV
Trigger: CACACTGTCCCGGAGCCTCCATCTCCACCTGAGCCA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp TCCTGTAACCCCTTTGTTTTGGCCAATTTCTCCCATTaGGAATGGCCGTATTCACCCAATACCTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: SCNPFVLANFSH*EWPYSPNTCTP
Trigger: GGGGGTACAGGTATTGGGTGAATACGGCCATTCCAAATGGGAGAAATTGGCCAAAACAAAGGGGTTACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp CTCACGTGTTGTGGGAGGGACCCAATGGGAAATATTTaGAATCATGGGGGCAGTTTCCCCCATATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LTCCGRDPMGNI*NHGGSFPHIVL
Trigger: GAGAACAATATGGGGGAAACTGCCCCCATGATTCAAAATATTTCCCATTGGGTCCCTCCCACAACACGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAAAGTCTATAATGCAATaGCTCACTCCCTACCCCATC +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITKSIMQ*LTPYPI
Trigger: GATGGGGTAGGGAGTGAGTCATTGCATTATAGACTT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAAAGGTGGACACGCGTaGCGAAGTTTTAGAGGAATT +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGKGGHA*RSFRGI
Trigger: AATTCCTCTAAAACTTCGCCACGCGTGTCCACCTTT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAAGAGGCAGGCTTGTCTaGGGATTGCAGGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRGRLV*GLQGAL
Trigger: GAGTGCTCCCTGCAATCCCCAGACAAGCCTGCCTCT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAACATCTCAATATAGATaGGGTGATGGGTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGTSQYR*GDGCVL
Trigger: CAGGACACACCCATCACCCCATCTATATTGAGATGT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGATTCTCCCATTTGGAATaGCCGTATTCACCCAATACC +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGFSHLE*PYSPNT
Trigger: GGTATTGGGTGAATACGGCCATTCCAAATGGGAGAA...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGCAAAGCCACAGGGGTaGAGCTGCCTACGACTATGG +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLAKPQG*SCLRLW
Trigger: CCATAGTCGTAGGCAGCTCCACCCCTGTGGCTTTGC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGTTATTTATCACCGCATaGTTTATAAAAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRLFITA*FIKARS
Trigger: GGACCTGGCTTTTATAAATCATGCGGTGATAAATAA...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCCTCTTGCATCACTGTaGCTTGGATATGAGACATGG +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRPLASL*LGYETW
Trigger: CCATGTCTCATATCCAAGTCACAGTGATGCAAGAGG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACAATGGGAAATATTTTaGATCATGGGGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITQWEIF*IMGAVS
Trigger: GGAAACTGCCCCCATGATTCAAAATATTTCCCATTG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACCCATGGCCAATGCATaGAAAAGATTCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITPMANA*KRFSFS
Trigger: TGAGAATGAGAATCTTTTGCATGCATTGGCCATGGG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCAGGGACTAGGAACCTaGCAAGGGCCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDQGLGT*QGPGPE
Trigger: CTCAGGCCCAGGCCCTTGCCAGGTTCCTAGTCCCTG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACCTCAGTGCACACTGTaGAAGGACAGCCCCATAGTC +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLPQCTL*KDSPIV
Trigger: GACTATGGGGCTGTCCTTCCACAGTGTGCACTGAGG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGTTATGTTTGTTCTTTTaGGCATCAAATACTGCACCC +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRLCLFF*ASNTAP
Trigger: GGGTGCAGTATTTGATGCCCAAAAGAACAAACATAA...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACATTTTCTTCCCAGTCTTaGGGATGTCTTTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITFSSQS*GCLYQQ
Trigger: CTGCTGATAAAGACATCCCCAAGACTGGGAAGAAAA...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGTTAGACTTTGGACTCTaGATTTGGGTTAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRLDFGL*IWVNAE
Trigger: TTCAGCATTAACCCAAATCCAGAGTCCAAAGTCTAA...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTACTTTGTTTTCTTATTaGCAATACCTAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRTLFSY*QYLGLV
Trigger: TACCAACCCTAGGTATTGCCAATAAGAAAACAAAGT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACCCAAACTAGTAAACTaGGAAAAGGACATTCACAGG +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGPKLVN*EKDIHR
Trigger: CCTGTGAATGTCCTTTTCCCAGTTTACTAGTTTGGG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCAAACTAGACACTTGTaGGTTTGCCGGCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRQTRHL*VCRHLL
Trigger: AAGCAAATGCCGGCAAACTCACAAGTGTCTAGTTTG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAAAAATAAAACTTCAGTaGATGGAGGAAACGCACCAG +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITKIKLQ*MEETHQ
Trigger: CTGGTGCGTTTCCTCCATTCACTGAAGTTTTATTTT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTGCCCCAAGGGCCTATaGAGTCCCTTGACTGCGACC +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDCPKGL*SPLTAT
Trigger: GGTCGCAGTCAAGGGACTGCATAGGCCCTTGGGGCA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTACAGGGAAACCTATTTaGTCCTCAACCAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRTGKPI*SSTSYR
Trigger: TCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGT...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGCACAGGGCCCACCATaGCACATGCAAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDAQGPP*HMQRKG
Trigger: CCCCTTCCTTTGCATGTGCCATGGTGGGCCCTGTGC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATAGGGTCACAGGCCACTaGCATGGCTCAGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDRVTGH*HGSAQF
Trigger: GAACTGGGCTGAGCCATGCCAGTGGCCTGTGACCCT...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAATGTATGAAAATGCCTaGATGCCCAGGCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGMYENA*MPRQKF
Trigger: AAACTTTTGCCTGGGCATCCAGGCATTTTCATACAT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACATGCCCTAGAGATTTGTaGAACTTTGAACTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITCPRDL*NFELER
Trigger: TCTCTCAAGTTCAAAGTTCCACAAATCTCTAGGGCA...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTGTCTCTTTAGCACAGTaGTGGAGTTTCTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRVSLAQ*WSFWTR
Trigger: TCTTGTCCAGAAACTCCACCACTGTGCTAAAGAGAC...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp TCTCATCTTGAACTGTACTCCCTTAATTCCCACATTTaGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: SHLELYSLNSHI*WEGPSGRESES
Trigger: TGATTCAGATTCTCTCCCACTGGGTCCCTCCCACAAAATGTGGGAATTAAGGGAGTACAGTTCAAGATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp TTGATTTTACAGGCTCATAGGTGGAAGGGCCTTGCCTaGTCTCAGATTAGACTTTGGACTCTGGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: LILQAHRWKGLA*SQIRLWTLDLG
Trigger: ACCCAAATCCAGAGTCCAAAGTCTAATCTGAGACAAGGCAAGGCCCTTCCACCTATGAGCCTGTAAAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp CTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTaGGAGGGCTCAGAAGAATATAGGAAAATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LWNWVTGRGWNS*EGSEEYRKMWE
Trigger: TTCCCACATTTTCCTATATTCTTCTGAGCCCTCCAAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACACAGCCAGGAATCTTaGCGGCAGCAAGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLHSQES*RQQEKS
Trigger: ACTTTTCTCTTGCTGCCGTCAAGATTCCTGGCTGTG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTGGAGGGCAAGGTCCTTaGACAGAAAATGTTTATACA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRGGQGP*TENVYT
Trigger: TGTATAAACATTTTCTGTGCAAGGACCTTGCCCTCC...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTATTACACCCCACAGTGTaGTCACTTACAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLLHPTV*SLTGGE
Trigger: CTCACCTCCTGTAAGTGACCACACTGTGGGGTGTAA...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGTACAGCTCAGCCCATaGTTTCAGAGAGTGCAAACC +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLVQLSP*FQRVQT
Trigger: GGTTTGCACTCTCTGAAACCATGGGCTGAGCTGTAC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGGGGAGGCTGAGGCATaGGAATTACTTGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDGEAEA*ELLEPW
Trigger: CCAGGGTTCAAGTAATTCTCATGCCTCAGCCTCCCC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTGTCAGAGAAGAGGGTaGGCCAGCTGTGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDCQRRG*ASCVLC
Trigger: ACACAGGACACAGCTGGCTCACCCTCTTCTCTGACA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGGTCTCAAGGGAAGGTaGTCCAAGGTGGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDGLKGR*SKVESG
Trigger: TCCTGACTCCACCTTGGAGCACCTTCCCTTGAGACC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR GCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCATCCCAGGCTGAGCTaGTCCATACAGGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDHPRLS*SIQGKE
Trigger: TTCCTTGCCCTGTATGGAGCAGCTCAGCCTGGGATG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATACTAGGCAACCAGGCTaGACTTGGACCAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDTRQPG*TWTSAG
Trigger: ACCTGCACTGGTCCAAGTCCAGCCTGGTTGCCTAGT...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCCATGCAAAGGTACATaGGTCAATGCACCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRPCKGT*VNAPLK
Trigger: TTTTAAAGGTGCATTGACCCATGTACCTTTGCATGG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGAAATGTGGGAAAGTTTaGAACCTCCTAGAAATTTGT +
Preference number: 4 (lower is better)
Translates to: PENVEATLELGNRQRLEQKCGKV*NLLEIC
Trigger: ACAAATTTCTAGGAGGTTCCAAACTTTCCCACATTT...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTTCTTTAGCACAGTGGTaGAGTTTCTGGACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRSLAQW*SFWTRK
Trigger: TTTTCTTGTCCAGAAACTCCACCACTGTGCTAAAGA...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATATGCCAGACTCAAGGTaGAGTCTGACCCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDMPDSR*SLTLTC
Trigger: GCAGGTCAGGGTCAGACTCCACCTTGAGTCTGGCAT...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp ACGACTATGGGAACACACCTCTTGCATCACTGTGACTaGGATATGAGACATGGAGTCAAAGGAAATCACTTT +
Preference number: 4 (lower is better)
Translates to: TTMGTHLLHHCD*DMRHGVKGNHF
Trigger: AAAGTGATTTCCTTTGACTCCATGTCTCATATCCAAGTCACAGTGATGCAAGAGGTGTGTTCCCATAGTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAACTGTGACTTGGATATaGGACATGGAGTCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLTVTWI*DMESKE
Trigger: TTCCTTTGACTCCATGTCTCATATCCAAGTCACAGT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR TCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGTATTTTCCTATGATTaGTGGGAACACTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLVFSYD*WEHCLA
Trigger: TGCCAAGCAGTGTTCCCATCAATCATAGGAAAATAC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAAGGGTTTCTCCATATTaGTCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRVSPY*SGWSQT
Trigger: AGTTTGAGACCAACCTGACCAATATGGAGAAACCCT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAAAAACTAATGGAACCTaGTACCTAGAAGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLKTNGT*YLEEDE
Trigger: CTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTT...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CCA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATTCAAAGTACAATACGTaGGGTCCTCATGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDSKYNT*GPHDAN
Trigger: GTTGGCATCATGAGGACCCCACGTATTGTACTTTGA...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
3UTR CAA 72 bp ATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTaGGTAAGGATGCGGGAAATGGTATTTTCCTATGAT +
Preference number: 4 (lower is better)
Translates to: IQTLFSYWQYLG*VRMREMVFSYD
Trigger: ATCATAGGAAAATACCATTTCCCGCATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS GCA 90 bp CGGCCGAGCCCCGGGAGCCGAGGCTGGAAACGCTGGAGCGGGCGCTaGCCACCGAAGGCGGCCCGGGACCGGGACGCGGGTCCGAGCGAC +
Preference number: 5 (lower is better)
Translates to: RPSPGSRGWKRWSGR*PPKAARDRDAGPSD
Trigger: GTCGCTCGGACCCGCGTCCCGGTCCCGGGCCGCCTTCGGTGGGCAGCGCCCGCTCCAGCGTTTCCAGCCTCGGCTCCCGGGGCTCGGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS CCA 90 bp CAGCGTAGGCGCCGGCCGAGCCCCGGGAGCCGAGGCTGGAAACGCTaGAGCGGGCGCTGCCCACCGAAGGCGGCCCGGGACCGGGACGCG +
Preference number: 5 (lower is better)
Translates to: QRRRRPSPGSRGWKR*SGRCPPKAARDRDA
Trigger: CGCGTCCCGGTCCCGGGCCGCCTTCGGTGGGCAGCGCCCGCTCCAGCGTTTCCAGCCTCGGCTCCCGGGGCTCGGCCGGCGCCTACGCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS CCA 90 bp GGAGGAAGTCAGCGTAGGCGCCGGCCGAGCCCCGGGAGCCGAGGCTaGAAACGCTGGAGCGGGCGCTGCCCACCGAAGGCGGCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: GGSQRRRRPSPGSRG*KRWSGRCPPKAARD
Trigger: GTCCCGGGCCGCCTTCGGTGGGCAGCGCCCGCTCCAGCGTTTCCAGCCTCGGCTCCCGGGGCTCGGCCGGCGCCTACGCTGACTTCCTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGGCCCGGGAGTGCGCTTaGCGAGGTCGGGGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: APGPAEGPTLRCSALHAVARECA*RGRGRG
Trigger: CCCCCGACCCCGACCTCGCAAAGCGCACTCCCGGGC...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GTGTGTGACCCGGGCGGGTTCACGTGCGCAGCGTGGAGAGGAGTGTGCGCTGGGCCACACACGCTGCATTaGTCGGCCGTCTGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VCDPGGFTCAAWRGVCAGPHTLH*SAVCWN
Trigger: GTTCCAGCAGACGGCCGACAAATGCAGCGTGTGTGG...CCCAGCGCACACTCCTCTCCACGCTGCGCACGTGAACCCGCCCGGGTCACACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCTTGTCGTGGAGCCCCTaGCCCCGCGCGCAGACACAG +
Preference number: 5 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSLSWSP*PRAQTQ
Trigger: CTGTGTCTGCGCGCGGGGCAAGGGGCTCCACGACAA...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCCCACGTGGACAGCGCTaGGCCCTTTATGTACCCACT +
Preference number: 5 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSPRGQR*ALYVPT
Trigger: AGTGGGTACATAAAGGGCCAAGCGCTGTCCACGTGG...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCACCCTGACCTGCCTCTaGGCCTTCCCATTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSTLTCL*AFPLEP
Trigger: TGGCTCTAATGGGAAGGCCAAGAGGCAGGTCAGGGT...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGAGCGTCAGGGCTCTGTaGGTCTCGCTCCAGTTCAAT +
Preference number: 5 (lower is better)
Translates to: APGPAEGPTLRCSALHAVSVRAL*VSLQFN
Trigger: ATTGAACTGGAGCGAGACCAACAGAGCCCTGACGCT...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGATAAAGACTCCCCATaGCCTGGCACGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHDKDSP*PGTPAG
Trigger: CCCAGCAGGCGTGCCAGGCAATGGGGAGTCTTTATC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGGCGGATGGATCGCTaGAGGCCAGGAGTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHRRMDR*RPGVPD
Trigger: GTCTGGAACTCCTGGCCTCAAGCGATCCATCCGCCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GAGAAGCCTCCTGCAGCTCAGCACTTCCGGACTCCTAGGAACTTCCAGTCCCAGGCAACCAGGCTGGACTaGGACCAGTGCAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: EKPPAAQHFRTPRNFQSQATRLD*DQCRWN
Trigger: GTTCCACCTGCACTGGTCCAAGTCCAGCCTGGTTGC...CTGGGACTGGAAGTTCCTAGGAGTCCGGAAGTGCTGAGCTGCAGGAGGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCACACAGGAGGCGCATTTaGGTGCAAAAACCGTGTGAT +
Preference number: 5 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPHRRRI*VQKPCD
Trigger: ATCACACGGTTTTTGCACCAAAATGCGCCTCCTGTG...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCAGGTAACAGGCAGAGGTaGGAACAGTTTGGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPGNRQR*EQFGGL
Trigger: GAGCCCTCCAAACTGTTCCAACCTCTGCCTGTTACC...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS TCA 90 bp TGTGATAGTCTCGCACGCAGTAGATGTTGTTCTCCACGTCCACGGTaGAGGGAACCCCGTCCAGGCACTCATTGCACACGGAGCACCGGA +
Preference number: 5 (lower is better)
Translates to: CDSLARSRCCSPRPR*REPRPGTHCTRSTG
Trigger: TCCGGTGCTCCGTGTGCAATGAGTGCCTGGACGGGGTTCCCTTCACCGTGGACGTGGAGAACAACATCTACTGCGTGCGAGACTATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585928.1
ENST00000590071.7
CDS GCA 90 bp ACACGAGTCGCAGGTGAAGCAGTCAGTGTGATAAAGACTCCCCATTaGCTGGCACGCCTGCTGGGCTCCGTAGATGCCAAGCCCACACTT +
Preference number: 5 (lower is better)
Translates to: TRVAGEAVSVIKTPH*LARLLGSVDAKPTL
Trigger: AAGTGTGGGCTTGGCATCTACGGAGCCCAGCAGGCGTGCCAGGCAATGGGGAGTCTTTATCACACTGACTGCTTCACCTGCGACTCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585928.1
ENST00000590071.7
CDS-3UTR CAA 90 bp GCCCCTGGTCCTGCTGAAGGCCCCACTCTAAGATGCAGCGCTCTCCACGCTGTGAAGGCTAAGGGAGTATaGAAACTTCCCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: APGPAEGPTLRCSALHAVKAKGV*KLPTSQ
Trigger: CTGTGAGGTGGGAAGTTTCAATACTCCCTTAGCCTT...CACAGCGTGGAGAGCGCTGCATCTTAGAGTGGGGCCTTCAGCAGGACCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGCCGTCCAGGCACTCATaGCACACGGAGCACCGGAAG +
Preference number: 5 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQPSRHS*HTEHRK
Trigger: CTTCCGGTGCTCCGTGTGCAATGAGTGCCTGGACGG...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CAA 90 bp CGCTCCAGTTCAATCCCTCTCTCCCTCTCTCTCTGCAGCTTATCCTGTCTCCGTAGGAGAAGGACCGGGTaGGCAACAAGGAGAAACCCG +
Preference number: 5 (lower is better)
Translates to: RSSSIPLSLSLCSLSCLRRRRTG*ATRRNP
Trigger: CGGGTTTCTCCTTGTTGCCAACCCGGTCCTTCTCCT...ACGGAGACAGGATAAGCTGCAGAGAGAGAGGGAGAGAGGGATTGAACTGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCTTGCATCACTGTGACTaGGATATGAGACATGGAGTC +
Preference number: 5 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSLHHCD*DMRHGV
Trigger: GACTCCATGTCTCATATCCAAGTCACAGTGATGCAA...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GCAGCCCACCCTAACCCTTCCTCAGCAGGGCTGATCACTATCAGGGATGGCCCACAAAGGCAGGAACCCTaGGCCTGCCATTTTCATGTT +
Preference number: 5 (lower is better)
Translates to: AAHPNPSSAGLITIRDGPQRQEP*ACHFHV
Trigger: AACATGAAAATGGCAGGCCAAGGGTTCCTGCCTTTG...TGGGCCATCCCTGATAGTGATCAGCCCTGCTGAGGAAGGGTTAGGGTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGGATAAAGACTCCCCATaGCCTGGCACGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGDKDSP*PGTPAG
Trigger: CCCAGCAGGCGTGCCAGGCAATGGGGAGTCTTTATC...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CAA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGCCACACACGCTGCATTaGTCGGCCGTCTGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGPHTLH*SAVCWN
Trigger: GTTCCAGCAGACGGCCGACAAATGCAGCGTGTGTGG...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CAA 90 bp GCGCCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGACACCACACGGATGGTaGTCTCGCAGCCCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: APGHVMVFKDKTGDHLFQTPHGW*SRSPVQ
Trigger: CTGCACAGGGCTGCGAGACAACCATCCGTGTGGTGT...CTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CAA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGCTGGTGTTTGTTCCCTaGGGCTCGGCCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: PENVEATLELGNRQRLEQLVFVP*GSAWTA
Trigger: GGCTGTCCAGGCCGAGCCCAAGGGAACAAACACCAG...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGATCCCTGGGGAATCCTaGGGCCCTATGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PENVEATLELGNRQRLEQIPGES*GPMPSW
Trigger: CCAGGAGGGCATAGGGCCCAAGGATTCCCCAGGGAT...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAGAAGCAGCTAAGGGGTaGGAGTCGGCCATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGEAAKG*ESAILA
Trigger: GGCCAGGATGGCCGACTCCAACCCCTTAGCTGCTTC...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCACCCTTCATTTTCTCTaGCCGCTACCACATAACTTT +
Preference number: 5 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSTLHFL*PLPHNF
Trigger: AAAGTTATGTGGTAGCGGCAAGAGAAAATGAAGGGT...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAACACCACACGGATGGTaGTCTCGCAGCCCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITTPHGW*SRSPVQ
Trigger: CTGCACAGGGCTGCGAGACAACCATCCGTGTGGTGT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAAAGCAGGAGAATTGCTaGAACCCGGGAGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGKQENC*NPGGGG
Trigger: GCCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCTT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACATGGAGATACTGCTGTaGGCAAATGAGCTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHMEILL*ANELGE
Trigger: CTCTCCAAGCTCATTTGCCAACAGCAGTATCTCCAT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GGAAGAAACCCCGGGAGAGTGGCTCCCACGGAGGGAACTGCCATGCACAGCTCCCACCCAAATCTCATCTaGAACTGTACTCCCTTAATT +
Preference number: 5 (lower is better)
Translates to: GRNPGRVAPTEGTAMHSSHPNLI*NCTPLI
Trigger: AATTAAGGGAGTACAGTTCAAGATGAGATTTGGGTG...GGAGCTGTGCATGGCAGTTCCCTCCGTGGGAGCCACTCTCCCGGGGTTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGGCCTATGCAGTCCCTaGACTGCGACCTTTGACAAA +
Preference number: 5 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRGLCSP*TATFDK
Trigger: TTTGTCAAAGGTCGCAGTCAAGGGACTGCATAGGCC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CTGGGTGGGAGGGATGAGCACAGCTGCACCCTACCCAACTCACCCCAACCCCCATTTATGTTTGTTCTTTaGGGCATCAAATACTGCACC +
Preference number: 5 (lower is better)
Translates to: LGGRDEHSCTLPNSPQPPFMFVL*GIKYCT
Trigger: GGTGCAGTATTTGATGCCCAAAAGAACAAACATAAA...TGGGGGTTGGGGTGAGTTGGGTAGGGTGCAGCTGTGCTCATCCCTCCCACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACAGGAGGGCAAGGTCCTaGCACAGAAAATGTTTATAC +
Preference number: 5 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHRRARS*HRKCLY
Trigger: GTATAAACATTTTCTGTGCAAGGACCTTGCCCTCCT...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGAACTAAAGCAGGAGAATaGCTTGAACCCGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGTKAGE*LEPGRR
Trigger: CCGCCTCCCGGGTTCAAGCAATTCTCCTGCTTTAGT...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGGACAGGGAAACCTATTaGCTCCTCAACCAGCTACAG +
Preference number: 5 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRDRETY*LLNQLQ
Trigger: CTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTC...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCGGTCACGTGATGGTTTTTAAAGACAAAACAGGAGACCACCTCTTCCAGGGGCACAGGAGGCGCATTTaGGTGCAAAAACCGTGTGAT +
Preference number: 5 (lower is better)
Translates to: PGHVMVFKDKTGDHLFQGHRRRI*VQKPCD
Trigger: ATCACACGGTTTTTGCACCAAAATGCGCCTCCTGTG...CCCCTGGAAGAGGTGGTCTCCTGTTTTGTCTTTAAAAACCATCACGTGACCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585928.1
CDS-3UTR CAA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGATGGAGATGAGGAACTaGTTGGGAACTGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRMEMRN*LGTGAK
Trigger: CTTTGCTCCAGTTCCCAACAAGTTCCTCATCTCCAT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGAATGTGGAAGCAACTTaGGAACTGGGTAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRNVEAT*ELGNRQ
Trigger: CTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATT...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCAAGGTGGAGTCAGGACAGGGAAACCTATTTGCTCCTCAACCAGCTACAGAGGCGAGGGTTTCCGCTTTaGCACCCTTCATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: PRWSQDRETYLLLNQLQRRGFPL*HPSFSL
Trigger: AAGAGAAAATGAAGGGTGCAAAAGCGGAAACCCTCG...CCTCTGTAGCTGGTTGAGGAGCAAATAGGTTTCCCTGTCCTGACTCCACCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp TGTGGGAGGGACCCAGTGGGAGAGAATCTGAATCATGGGGGCAGTTTCCCCCACGACTTTGTTTTCTTATaGGCAATACCTAGGGTTGGT +
Preference number: 5 (lower is better)
Translates to: CGRDPVGENLNHGGSFPHDFVFL*AIPRVG
Trigger: ACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTC...GTGGGGGAAACTGCCCCCATGATTCAGATTCTCTCCCACTGGGTCCCTCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACATGTAATCCCAGAACTTaGGAAGGTCAAGGCGGATGG +
Preference number: 5 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITCNPRT*EGQGGW
Trigger: CCATCCGCCTTGACCTTCCAAAGTTCTGGGATTACA...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACAAGAGCAGTTCCACTaGGGATTGTCATGGTACCTG +
Preference number: 5 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGQEQFH*GLSWYL
Trigger: CAGGTACCATGACAATCCCAAGTGGAACTGCTCTTG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACAACTGGGAGTGGGGTGTaGCTGAAAACATACCCGAAA +
Preference number: 5 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITTGSGV*LKTYPK
Trigger: TTTCGGGTATGTTTTCAGCAACACCCCACTCCCAGT...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACATGGCAATACCTAGGGTaGGTAAGGATGCGGGAAATG +
Preference number: 5 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITWQYLG*VRMREM
Trigger: CATTTCCCGCATCCTTACCAACCCTAGGTATTGCCA...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp ACAGACAAAACTAATGGAACCTGGTACCTAGAAGAGGATGAGAAGGATCCCCGTCAGTTCCACTTGGGATaGTCATGGTACCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: TDKTNGTWYLEEDEKDPRQFHLG*SWYLQL
Trigger: GAGCTGCAGGTACCATGACAATCCCAAGTGGAACTG...ACGGGGATCCTTCTCATCCTCTTCTAGGTACCAGGTTCCATTAGTTTTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACATATTCTTTAAAAGGTTaGGCCTGCACCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITYSLKG*ACTLSA
Trigger: TGCACTGAGGGTGCAGGCCAAACCTTTTAAAGAATA...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCGAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGGTCATACTTACTTTTTaGAAAAGGAGGGCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: PENVEATLELGNRQRLEQVILTF*KRRARS
Trigger: GGACCTTGCCCTCCTTTTCAAAAAAGTAAGTATGAC...CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp GAGAATGAGGAGGGATCCTTAGAGGACCTGAGATTTCAACCACATGGAGCAGGACCAATGGGAAATATTTaGAATCATGGGGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: ENEEGSLEDLRFQPHGAGPMGNI*NHGGSF
Trigger: GAAACTGCCCCCATGATTCAAAATATTTCCCATTGG...TCCTGCTCCATGTGGTTGAAATCTCAGGTCCTCTAAGGATCCCTCCTCATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCGGGGTTTCGCCATGTaGGCCAGGATTGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDRGFAM*ARIVSN
Trigger: GTTCGAGACAATCCTGGCCAACATGGCGAAACCCCG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCATTGGTCTTCCCATCACACACCGAAATCTCATCTaGAATTGTACTCCCATAATT +
Preference number: 5 (lower is better)
Translates to: PKTMGKMSPGHVIGLPITHRNLI*NCTPII
Trigger: AATTATGGGAGTACAATTCAAGATGAGATTTCGGTG...TGTGATGGGAAGACCAATGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCAAAGAGGCTTCTGCTaGCATAGGGTGGACTGGGAC +
Preference number: 5 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDQRGFC*HRVDWD
Trigger: GTCCCAGTCCACCCTATGCAAGCAGAAGCCTCTTTG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATCTTGAGGTCAGGAGTTaGACACCAACCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDLEVRS*TPTWPT
Trigger: TGTTGGCCAGGTTGGTGTCAAACTCCTGACCTCAAG...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTACGGGGGTTTCTGCTTTaGCATCTCTGTCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLRGFLL*HLCHFS
Trigger: AGAAAAATGACAGAGATGCAAAAGCAGAAACCCCCG...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CCCCCATATTGTTCTCATGGTAGTGAATATGTCTCACGAGATCTCATGGTTTTAGAATTTGGGGGACTGTaGGGAAGTCATGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: PPYCSHGSEYVSRDLMVLEFGGL*GSHDWF
Trigger: AAACCAATCATGACTTCCCAACAGTCCCCCAAATTC...TAAAACCATGAGATCTCGTGAGACATATTCACTACCATGAGAACAATATGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGAGATGAGGAACTTGTaGGGAACTGGAGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDEMRNL*GTGAKV
Trigger: CACCTTTGCTCCAGTTCCCAACAAGTTCCTCATCTC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS-3UTR CAA 90 bp CAAATTGATACAGACTTTGTTTTCTTATTGGCAATACCTAGGGTTGGTAAGGATGTAACTAACTTGCTTTaGATTTTACAGGCTCATAGG +
Preference number: 5 (lower is better)
Translates to: QIDTDFVFLLAIPRVGKDVTNLL*ILQAHR
Trigger: CCTATGAGCCTGTAAAATCAAAAGCAAGTTAGTTAC...ATCCTTACCAACCCTAGGTATTGCCAATAAGAAAACAAAGTCTGTATCAATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS GCA 72 bp CCCGGGAGCCGAGGCTGGAAACGCTGGAGCGGGCGCTaGCCACCGAAGGCGGCCCGGGACCGGGACGCGGGT +
Preference number: 6 (lower is better)
Translates to: PGSRGWKRWSGR*PPKAARDRDAG
Trigger: ACCCGCGTCCCGGTCCCGGGCCGCCTTCGGTGGGCAGCGCCCGCTCCAGCGTTTCCAGCCTCGGCTCCCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS CCA 72 bp GGTGAGGGAAGAGGCCCAGGTTGGAGGCGCCGCAGGTaGCAACGACGACACAGTAGGTGGCCCGCCAGGGGA +
Preference number: 6 (lower is better)
Translates to: GEGRGPGWRRRR*QRRHSRWPARG
Trigger: TCCCCTGGCGGGCCACCTACTGTGTCGTCGTTGCCACCTGCGGCGCCTCCAACCTGGGCCTCTTCCCTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS TCA 72 bp TTCCCCTGCTCAGAGCTCAGTGACGTGCACAGTGGGTaGGGGAAGAGGCCCAGGTTGGAGGCGCCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: FPCSELSDVHSG*GKRPRLEAPQV
Trigger: CACCTGCGGCGCCTCCAACCTGGGCCTCTTCCCTCACCCACTGTGCACGTCACTGAGCTCTGAGCAGGGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590071.7
CDS TCA 72 bp CTCGCACGCAGTAGATGTTGTTCTCCACGTCCACGGTaGAGGGAACCCCGTCCAGGCACTCATTGCACACGG +
Preference number: 6 (lower is better)
Translates to: LARSRCCSPRPR*REPRPGTHCTR
Trigger: CCGTGTGCAATGAGTGCCTGGACGGGGTTCCCTTCACCGTGGACGTGGAGAACAACATCTACTGCGTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585928.1
ENST00000590071.7
CDS GCA 72 bp GCAGGTGAAGCAGTCAGTGTGATAAAGACTCCCCATTaGCTGGCACGCCTGCTGGGCTCCGTAGATGCCAAG +
Preference number: 6 (lower is better)
Translates to: AGEAVSVIKTPH*LARLLGSVDAK
Trigger: CTTGGCATCTACGGAGCCCAGCAGGCGTGCCAGGCAATGGGGAGTCTTTATCACACTGACTGCTTCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585928.1
ENST00000590071.7
CDS GCA 72 bp ATGAGATGTCCACACACGCTGCATTTGTCGGCCGTCTaGTGGAACCCGGAGTACAGGAAGTCCTCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: MRCPHTLHLSAV*WNPEYRKSSWQ
Trigger: CTGCCAGGAGGACTTCCTGTACTCCGGGTTCCAGCAGACGGCCGACAAATGCAGCGTGTGTGGACATCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585928.1
ENST00000590071.7
CDS CCA 72 bp AGATGTCCACACACGCTGCATTTGTCGGCCGTCTGCTaGAACCCGGAGTACAGGAAGTCCTCCTGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: RCPHTLHLSAVC*NPEYRKSSWQY
Trigger: GTACTGCCAGGAGGACTTCCTGTACTCCGGGTTCCAGCAGACGGCCGACAAATGCAGCGTGTGTGGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585928.1
ENST00000590071.7
CDS CCA 72 bp TGCAGGGAGGATAGGACGGGCACAGGAGGCGCATTTTaGTGCAAAAACCGTGTGATAGTCTCGCACGCAGTA +
Preference number: 6 (lower is better)
Translates to: CREDRTGTGGAF*CKNRVIVSHAV
Trigger: TACTGCGTGCGAGACTATCACACGGTTTTTGCACCAAAATGCGCCTCCTGTGCCCGTCCTATCCTCCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585928.1
ENST00000590071.7