RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WSCD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000075035

Ensembl transcript IDs: ENST00000332082.8, ENST00000546401.1, ENST00000546629.1, ENST00000546811.1, ENST00000547185.1, ENST00000547525.6, ENST00000549903.1, ENST00000550529.5, ENST00000551057.5, ENST00000551106.1, ENST00000551638.5, ENST00000551734.1, ENST00000552195.5

Found 854 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCACATGGCATGTGACCATCCTCGTGGGCTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTATCAGGATCTCAAGGTCACCTCCTG +
Preference number: 1 (lower is better)
Translates to: LHMACDHPRGLTVGA*GSLKVVSGSQGHLL
Trigger: CAGGAGGTGACCTTGAGATCCTGATACCACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGAGGATGGTCACATGCCATGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 90 bp CTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCAAAGAACTaGCCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCTC +
Preference number: 1 (lower is better)
Translates to: LQAEACGQRGPPAKN*PRSWTKSLPERVNL
Trigger: GAGGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 90 bp TCCATGATGTGGATGAGCCCTCCCTCCCACAAATGGAACCCAGAGTaGTGGGGGCAGGGACCCAGGAGACAGAAAAGAGTCCATGTAACT +
Preference number: 1 (lower is better)
Translates to: SMMWMSPPSHKWNPE*WGQGPRRQKRVHVT
Trigger: AGTTACATGGACTCTTTTCTGTCTCCTGGGTCCCTGCCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGGGCTCATCCACATCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 90 bp CATGTGACCATCCTCGTGGGCTCACTGTTGGTGCCTGAGGTTCCTTaGAGGTGGTATCAGGATCTCAAGGTCACCTCCTGGACACAGCAT +
Preference number: 1 (lower is better)
Translates to: HVTILVGSLLVPEVP*RWYQDLKVTSWTQH
Trigger: ATGCTGTGTCCAGGAGGTGACCTTGAGATCCTGATACCACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGAGGATGGTCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 90 bp AGGTCACCTCCTGGACACAGCATGGATAGAAAGGGGCAGGGTTCATaGCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGT +
Preference number: 1 (lower is better)
Translates to: RSPPGHSMDRKGQGS*PGGGKASSSFLRSS
Trigger: ACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTTTCTATCCATGCTGTGTCCAGGAGGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 90 bp ATGATGTGGATGAGCCCTCCCTCCCACAAATGGAACCCAGAGTGGTaGGGGCAGGGACCCAGGAGACAGAAAAGAGTCCATGTAACTAGA +
Preference number: 1 (lower is better)
Translates to: MMWMSPPSHKWNPEW*GQGPRRQKRVHVTR
Trigger: TCTAGTTACATGGACTCTTTTCTGTCTCCTGGGTCCCTGCCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGGGCTCATCCACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 90 bp TTGAAGGTGGTATCAGGATCTCAAGGTCACCTCCTGGACACAGCATaGATAGAAAGGGGCAGGGTTCATGCCCTGGAGGTGGAAAGGCAA +
Preference number: 1 (lower is better)
Translates to: LKVVSGSQGHLLDTA*IERGRVHALEVERQ
Trigger: TTGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTTTCTATCCATGCTGTGTCCAGGAGGTGACCTTGAGATCCTGATACCACCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 90 bp GTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTaGCCATCCTCGTGGGCTCACTGTTGGTGCCTGAGGTTCCTTGAA +
Preference number: 1 (lower is better)
Translates to: VSLGLSLKSNSAHGM*PSSWAHCWCLRFLE
Trigger: TTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGAGGATGGTCACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 90 bp TGGTCTGGGAAGGTAGTGGGGGTCCATTTTGGGTGTGGTTCCATCTaGTTAAGAACACTCTTGCTGTCTCACCTGGATAGCAAAGGACCC +
Preference number: 1 (lower is better)
Translates to: WSGKVVGVHFGCGSI*LRTLLLSHLDSKGP
Trigger: GGGTCCTTTGCTATCCAGGTGAGACAGCAAGAGTGTTCTTAATCAGATGGAACCACACCCAAAATGGACCCCCACTACCTTCCCAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 90 bp TCTCTTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATaGGCATTTACCTGCACTCCAAGGCTTCAGAGGGACTGCCTAGGG +
Preference number: 1 (lower is better)
Translates to: SLYTHLLHGLFATWE*AFTCTPRLQRDCLG
Trigger: CCCTAGGCAGTCCCTCTGAAGCCTTGGAGTGCAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 90 bp GGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTaGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTGACCAT +
Preference number: 1 (lower is better)
Translates to: GSVRLTGAHHGEMCH*GSLLSQILHMACDH
Trigger: ATGGTCACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 90 bp ATGGTGCAGGTTTGGACTGGGTGGGAAGCTACTGGTATCCAGGGTTaGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATG +
Preference number: 1 (lower is better)
Translates to: MVQVWTGWEATGIQG*GRDGTLDQHFVRLM
Trigger: CATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTGCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 90 bp GAATTGGGGAAGTGTGCCACAGGTCTAATCCCTGTGCCCTTGCTTTaGATGGCCAGGTTCCAAGGGGCGGAATGTATTAATCATATTCCT +
Preference number: 1 (lower is better)
Translates to: ELGKCATGLIPVPLL*MARFQGAECINHIP
Trigger: AGGAATATGATTAATACATTCCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAGACCTGTGGCACACTTCCCCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 90 bp AGGCAATTTTACACACAGAGGCACGTAATTCTCCCTGAGCAGCTATaGCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCT +
Preference number: 1 (lower is better)
Translates to: RQFYTQRHVILPEQL*QSHTGTKQLYTNPP
Trigger: AGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATAGCTGCTCAGGGAGAATTACGTGCCTCTGTGTGTAAAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR GCA 90 bp AGAGGCTATGACCTATGGCTTTTTCATCTACATAATGATGGATGGTaGAGGTTTGGACTGGGTGGGAAGCTACTGGTATCCAGGGTTGGG +
Preference number: 1 (lower is better)
Translates to: RGYDLWLFHLHNDGW*RFGLGGKLLVSRVG
Trigger: CCCAACCCTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCATCATTATGTAGATGAAAAAGCCATAGGTCATAGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 90 bp TATGGCTTTTTCATCTACATAATGATGGATGGTGCAGGTTTGGACTaGGTGGGAAGCTACTGGTATCCAGGGTTGGGGAAGAGATGGGAC +
Preference number: 1 (lower is better)
Translates to: YGFFIYIMMDGAGLD*VGSYWYPGLGKRWD
Trigger: GTCCCATCTCTTCCCCAACCCTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCATCATTATGTAGATGAAAAAGCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 90 bp ACGGAGAAACTTCCCAGCAATCTTTCTTTAGAACAGAAGGTGGCCTaGGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAAG +
Preference number: 1 (lower is better)
Translates to: TEKLPSNLSLEQKVA*VKHRCQHFLGGDEK
Trigger: CTTCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTCTAAAGAAAGATTGCTGGGAAGTTTCTCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 90 bp GAGAACACAAAGGCAATTTTACACACAGAGGCACGTAATTCTCCCTaGGCAGCTATGCCAGAGTCACACAGGCACAAAGCAGTTATACAC +
Preference number: 1 (lower is better)
Translates to: ENTKAILHTEARNSP*AAMPESHRHKAVIH
Trigger: GTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATAGCTGCTCAGGGAGAATTACGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CCA 90 bp CAAAGAGGCTATGACCTATGGCTTTTTCATCTACATAATGATGGATaGTGCAGGTTTGGACTGGGTGGGAAGCTACTGGTATCCAGGGTT +
Preference number: 1 (lower is better)
Translates to: QRGYDLWLFHLHNDG*CRFGLGGKLLVSRV
Trigger: AACCCTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCATCATTATGTAGATGAAAAAGCCATAGGTCATAGCCTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 90 bp GACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTaGACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTG +
Preference number: 1 (lower is better)
Translates to: DHFLLYTGAIPYTRT*TDSLQIRWSYRQLV
Trigger: CACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR TCA 90 bp AAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTaGTTTAGGTCCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCA +
Preference number: 1 (lower is better)
Translates to: KRWDSGPTLCKIDAP*FRSSEILRFGISAS
Trigger: TGATGCTGAAATGCCAAACCGAAGGATTTCTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 90 bp TTACAAAAATATATCTCTTTACACGCACCTTCTCCATGGTCTCTTTaGTACTTGGGAATGAGCATTTACCTGCACTCCAAGGCTTCAGAG +
Preference number: 1 (lower is better)
Translates to: LQKYISLHAPSPWSL*YLGMSIYLHSKASE
Trigger: CTCTGAAGCCTTGGAGTGCAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGAGATATATTTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCCCCCTGGGTGGGCCTaGGGCAGCCCAAATCCTACA +
Preference number: 2 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTPPGWA*GSPNPT
Trigger: TGTAGGATTTGGGCTGCCCCAGGCCCACCCAGGGGG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACAAATGGAACCCAGAGTaGTGGGGGCAGGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDKWNPE*WGQGPR
Trigger: CCTGGGTCCCTGCCCCCACCACTCTGGGTTCCATTT...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCTGCCCTTGCTTTGCATaGCCAGGTTCCAAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPCPCFA*PGSKGR
Trigger: CCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCA...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR TCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGTCTGCACATGGCATGTaGCCATCCTCGTGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWSAHGM*PSSWAH
Trigger: GTGAGCCCACGAGGATGGTCACATGCCATGTGCAGA...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGCAGGGTTCATGCCCTaGAGGTGGAAAGGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWAGFMP*RWKGKQ
Trigger: CTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGC...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCAGACTGGAGCCCACCATaGAGAGATGTGTCACTGGGG +
Preference number: 2 (lower is better)
Translates to: VDLRNLQAEACGQRGPPADWSPP*RDVSLG
Trigger: CCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTC...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAATCAGAGCCCCCTGGGTaGGCCTGGGGCAGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKSEPPG*AWGSPN
Trigger: ATTTGGGCTGCCCCAGGCCCACCCAGGGGGCTCTGA...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CAA 90 bp AGCTTGTGGTCAGAGGGGACCACCAGCAAAGAACTGACCCAGGTCTaGGACCAAGAGTCTCCCAGAGAGAGTCAACCTCCCAGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: SLWSEGTTSKELTQV*DQESPRESQPPSRR
Trigger: CCTTCTACTGGGAGGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTGGTGGTCCCCTCTGACCACAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGTGGAACCCAGAGTGGTaGGGGCAGGGACCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLWNPEW*GQGPRR
Trigger: TCTCCTGGGTCCCTGCCCCCACCACTCTGGGTTCCA...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCGAACAGAAGGTGGCCTaGGTTAAACATCGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAEQKVA*VKHRCQ
Trigger: CTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTC...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGAACAGAAGGTGGCCTaGGTTAAACATCGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWEQKVA*VKHRCQ
Trigger: CTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTC...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTA +
Preference number: 2 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLLTVGA*GSLKVV
Trigger: TACCACCTTCAAGGAACCTCAGGCACCAACAGTGAG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCTGGATGGTGCAGGTTTaGACTGGGTGGGAAGCTACT +
Preference number: 2 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPWMVQV*TGWEAT
Trigger: AGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCA...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGTCAGAGCCCCCTGGGTaGGCCTGGGGCAGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRSEPPG*AWGSPN
Trigger: ATTTGGGCTGCCCCAGGCCCACCCAGGGGGCTCTGA...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CAA 90 bp GGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATaGAAGGCAAAGAGCAGCCAAGGGGATTGTCCCCAGACCAAAGAG +
Preference number: 2 (lower is better)
Translates to: GQSLPLSLLCHAGNS*KAKSSQGDCPQTKE
Trigger: CTCTTTGGTCTGGGGACAATCCCCTTGGCTGCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CAA 90 bp GGGGAACATGTGAGCAGAGTGGTAGTGCCTGGGCAATCTCTTCCCTaGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGC +
Preference number: 2 (lower is better)
Translates to: GEHVSRVVVPGQSLP*SLLCHAGNSLKAKS
Trigger: GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTGCTCACATGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCGTGCCTGAGGTTCCTTaGAGGTGGTATCAGGATCTC +
Preference number: 2 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTVPEVP*RWYQDL
Trigger: GAGATCCTGATACCACCTTCAAGGAACCTCAGGCAC...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATGTGCCTGAGGTTCCTTaGAGGTGGTATCAGGATCTC +
Preference number: 2 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYVPEVP*RWYQDL
Trigger: GAGATCCTGATACCACCTTCAAGGAACCTCAGGCAC...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTA +
Preference number: 2 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYLTVGA*GSLKVV
Trigger: TACCACCTTCAAGGAACCTCAGGCACCAACAGTGAG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAATCTGCACATGGCATGTaGCCATCCTCGTGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKSAHGM*PSSWAH
Trigger: GTGAGCCCACGAGGATGGTCACATGCCATGTGCAGA...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGAAGAGCCTTGACAATTaGCATGGGGCATCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWKSLDN*HGASSK
Trigger: CTTGCTGGATGCCCCATGGCAATTGTCAAGGCTCTT...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCCTCCCTCCCACAAATaGAACCCAGAGTGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSPPSHK*NPEWWG
Trigger: CCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCATTTACAATAGCCCCCTaGGCTCTTGCATCAAGAGCC +
Preference number: 2 (lower is better)
Translates to: VDLRNLQAEACGQRGPPAFTIAP*ALASRA
Trigger: GGCTCTTGATGCAAGAGCCCAGGGGGCTATTGTAAA...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGCCCCCAAGGGAAGCTaGCCCTGTTGGACTATGATC +
Preference number: 2 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKAPKGS*PCWTMI
Trigger: GATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CAA 90 bp CCAACCCGCCTGCCACCCCGAACATTTTCTGTCTATCTCTGTTTCTaGTCTCTCTCTCTGTCTCTCTATGCCTCTCTGCCTCTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: PTRLPPRTFSVYLCF*SLSLSLYASLPLSV
Trigger: GACAGAGAGAGGCAGAGAGGCATAGAGAGACAGAGAGAGAGACAAGAAACAGAGATAGACAGAAAATGTTCGGGGTGGCAGGCGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR TCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGCAAGCAGCTCATTTCTaGGAAGCAGTGTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLQAAHF*EAVWPG
Trigger: CCCAGGCCACACTGCTTCTCAGAAATGAGCTGCTTG...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCGGCCCTGTTGGACTATaGTCAAGGGGAGATATATGG +
Preference number: 2 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTGPVGL*SRGDIW
Trigger: CCATATATCTCCCCTTGATCATAGTCCAACAGGGCC...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CAA 90 bp ATGAGGGAATTGGGGAAGTGTGCCACAGGTCTAATCCCTGTGCCCTaGCTTTGCATGGCCAGGTTCCAAGGGGCGGAATGTATTAATCAT +
Preference number: 2 (lower is better)
Translates to: MRELGKCATGLIPVP*LCMARFQGAECINH
Trigger: ATGATTAATACATTCCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAGACCTGTGGCACACTTCCCCAATTCCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCAAGCAGCTCATTTCTaGGAAGCAGTGTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLQAAHF*EAVWPG
Trigger: CCCAGGCCACACTGCTTCTCAGAAATGAGCTGCTTG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGAAGGGGCAGGGTTCATaGCCTGGAGGTGGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRKGQGS*PGGGKA
Trigger: TGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTT...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACAGAGTGGTAGTGCCTaGGCAATCTCTTCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKQSGSA*AISSLE
Trigger: CTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTCAGAGTGGTAGTGCCTaGGCAATCTCTTCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTQSGSA*AISSLE
Trigger: CTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTG...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATATGGAACCCAGAGTGGTaGGGGCAGGGACCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIWNPEW*GQGPRR
Trigger: TCTCCTGGGTCCCTGCCCCCACCACTCTGGGTTCCA...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCAAGTCTCCATGATGTaGATGAGCCCTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSQVSMM*MSPPSH
Trigger: GTGGGAGGGAGGGCTCATCCACATCATGGAGACTTG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCTTTACAATAGCCCCCTaGGCTCTTGCATCAAGAGCC +
Preference number: 2 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAFTIAP*ALASRA
Trigger: GGCTCTTGATGCAAGAGCCCAGGGGGCTATTGTAAA...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGTCGTGGGCTCACTGTTaGTGCCTGAGGTTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLSWAHC*CLRFLE
Trigger: TTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGA...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCCTACATAATGATGGATaGTGCAGGTTTGGACTGGGT +
Preference number: 2 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPLHNDG*CRFGLG
Trigger: ACCCAGTCCAAACCTGCACCATCCATCATTATGTAG...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR TCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATCAAAGAGAGGACAGATaGGTGGGGGTAACCAGGGGT +
Preference number: 2 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDQREDR*VGVTRG
Trigger: ACCCCTGGTTACCCCCACTCATCTGTCCTCTCTTTG...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGGGTGTGGTTCCATCTaGTTAAGAACACTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAGCGSI*LRTLLL
Trigger: CAGCAAGAGTGTTCTTAATCAGATGGAACCACACCC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTCAGAGTGGTAGTGCCTaGGCAATCTCTTCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPQSGSA*AISSLE
Trigger: CTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTG...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTACCTCCCTCCCACAAATaGAACCCAGAGTGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: THTHTHTLGKHPICEPVLPPSHK*NPEWWG
Trigger: CCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGG...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGCAAGTCTCCATGATGTaGATGAGCCCTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRQVSMM*MSPPSH
Trigger: GTGGGAGGGAGGGCTCATCCACATCATGGAGACTTG...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATCAAGTCTCCATGATGTaGATGAGCCCTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDQVSMM*MSPPSH
Trigger: GTGGGAGGGAGGGCTCATCCACATCATGGAGACTTG...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCGAAGGGACAAGCATCTaGGGCCAAGTTTTTACAATA +
Preference number: 2 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPEGTSI*GQVFTI
Trigger: TATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTC...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCACCAATGGCCCCACATaGTGTCTCCAATTAACCTAC +
Preference number: 2 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLATNGPT*CLQLTY
Trigger: GTAGGTTAATTGGAGACACCATGTGGGGCCATTGGT...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGAGAAGCAGTGTGGCCTaGGGGGCTCATAACACCAAT +
Preference number: 2 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLRSSVA*GAHNTN
Trigger: ATTGGTGTTATGAGCCCCCCAGGCCACACTGCTTCT...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGGGAGATATATGGTCTaGGAAGGTAGTGGGGGTCCA +
Preference number: 2 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPGRYMV*EGSGGP
Trigger: TGGACCCCCACTACCTTCCCAGACCATATATCTCCC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGGAAGCTGGCCCTGTTaGACTATGATCAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQGSWPC*TMIKGR
Trigger: TCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGGGTTGGGGAAGAGATaGGACTCTGGACCAACACTT +
Preference number: 2 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPGLGKR*DSGPTL
Trigger: AAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CAA 90 bp CAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATaGATGCTCCGTGATTTAGGTCCTCAGAAATCCTTCGGTTTGGCA +
Preference number: 2 (lower is better)
Translates to: QGWGRDGTLDQHFVR*MLRDLGPQKSFGLA
Trigger: TGCCAAACCGAAGGATTTCTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCCAATTAACCTACTGTaGGCACCATTACCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLPINLL*APLPPH
Trigger: GTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTA +
Preference number: 2 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGLTVGA*GSLKVV
Trigger: TACCACCTTCAAGGAACCTCAGGCACCAACAGTGAG...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGTCTGCACATGGCATGTaGCCATCCTCGTGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTSAHGM*PSSWAH
Trigger: GTGAGCCCACGAGGATGGTCACATGCCATGTGCAGA...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR GCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTAGGCTTCAGAGGGACTaGCTAGGGAGGCTACTCCAA +
Preference number: 2 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPRLQRD*LGRLLQ
Trigger: TTGGAGTAGCCTCCCTAGGCAGTCCCTCTGAAGCCT...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCACCTCCCTCCCACAAATaGAACCCAGAGTGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPPPSHK*NPEWWG
Trigger: CCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGG...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGAAGAAGCAGTGTGGCCTaGGGGGCTCATAACACCAAT +
Preference number: 2 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGRSSVA*GAHNTN
Trigger: ATTGGTGTTATGAGCCCCCCAGGCCACACTGCTTCT...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTAGAAGCAGTGTGGCCTaGGGGGCTCATAACACCAAT +
Preference number: 2 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGRSSVA*GAHNTN
Trigger: ATTGGTGTTATGAGCCCCCCAGGCCACACTGCTTCT...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGATCGTGGGCTCACTGTTaGTGCCTGAGGTTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGSWAHC*CLRFLE
Trigger: TTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGA...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAGACTGGAGCCCACCATaGAGAGATGTGTCACTGGGG +
Preference number: 2 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIDWSPP*RDVSLG
Trigger: CCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTC...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCATCAGGCAGAAGCTTGTaGTCAGAGGGGACCACCAGC +
Preference number: 2 (lower is better)
Translates to: ATCGIQFQNIERQENTKASGRSL*SEGTTS
Trigger: GCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGA...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR TCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCACAAAGAGAGGACAGATaGGTGGGGGTAACCAGGGGT +
Preference number: 2 (lower is better)
Translates to: ATCGIQFQNIERQENTKAQREDR*VGVTRG
Trigger: ACCCCTGGTTACCCCCACTCATCTGTCCTCTCTTTG...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR TCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGGGTGTGGTTCCATCTaGTTAAGAACACTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQGCGSI*LRTLLL
Trigger: CAGCAAGAGTGTTCTTAATCAGATGGAACCACACCC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCCCTCCACTGCTTCATaGAAGAAGACTAAAAATTCT +
Preference number: 2 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTPSTAS*KKTKNS
Trigger: AGAATTTTTAGTCTTCTTTCATGAAGCAGTGGAGGG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATAAGAGCCTTGACAATTaGCATGGGGCATCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDKSLDN*HGASSK
Trigger: CTTGCTGGATGCCCCATGGCAATTGTCAAGGCTCTT...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTTGGGCTCACTGTTGGTaGCTGAGGTTCCTTGAAGGT +
Preference number: 2 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPWAHCW*LRFLEG
Trigger: ACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCA...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGCATAATGATGGATGGTaGAGGTTTGGACTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRHNDGW*RFGLGG
Trigger: CCCACCCAGTCCAAACCTGCACCATCCATCATTATG...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAGCAGGGTTCATGCCCTaGAGGTGGAAAGGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPAGFMP*RWKGKQ
Trigger: CTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGC...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGTCAAATTCTGCACATaGCATGTGACCATCCTCGTG +
Preference number: 2 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPVKFCT*HVTILV
Trigger: CACGAGGATGGTCACATGCCATGTGCAGAATTTGAC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGTGTAAGACTGACTaGAGCCCACCATGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGQCKTD*SPPWRD
Trigger: ATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTG...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCACAAAGAGAGGACAGATaGGTGGGGGTAACCAGGGGT +
Preference number: 2 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPQREDR*VGVTRG
Trigger: ACCCCTGGTTACCCCCACTCATCTGTCCTCTCTTTG...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTGGGTGTGGTTCCATCTaGTTAAGAACACTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGGCGSI*LRTLLL
Trigger: CAGCAAGAGTGTTCTTAATCAGATGGAACCACACCC...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGAGCCCCCTGGGCTCTTaGATCAAGAGCCTTGACAAT +
Preference number: 2 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTSPLGS*IKSLDN
Trigger: ATTGTCAAGGCTCTTGATGCAAGAGCCCAGGGGGCT...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR GCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAAGCCCCCTGGGCTCTTaGATCAAGAGCCTTGACAAT +
Preference number: 2 (lower is better)
Translates to: PQKSFGLAFQHQESSVCISPLGS*IKSLDN
Trigger: ATTGTCAAGGCTCTTGATGCAAGAGCCCAGGGGGCT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGAAGGGGCAGGGTTCATaGCCTGGAGGTGGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGKGQGS*PGGGKA
Trigger: TGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTT...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATACACCAACCCGCCTaGCACCCCGAACATTTTCTG +
Preference number: 2 (lower is better)
Translates to: ATCGIQFQNIERQENTKAIHQPA*HPEHFL
Trigger: CAGAAAATGTTCGGGGTGGCAGGCGGGTTGGTGTAT...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATACCAATGGCCCCACATaGTGTCTCCAATTAACCTAC +
Preference number: 2 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDTNGPT*CLQLTY
Trigger: GTAGGTTAATTGGAGACACCATGTGGGGCCATTGGT...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGGTCAAATTCTGCACATaGCATGTGACCATCCTCGTG +
Preference number: 2 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRVKFCT*HVTILV
Trigger: CACGAGGATGGTCACATGCCATGTGCAGAATTTGAC...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGGGAAGCTGGCCCTGTTaGACTATGATCAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTGSWPC*TMIKGR
Trigger: TCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCC...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTCTACATAATGATGGATaGTGCAGGTTTGGACTGGGT +
Preference number: 2 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPLHNDG*CRFGLG
Trigger: ACCCAGTCCAAACCTGCACCATCCATCATTATGTAG...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CAA 90 bp AAATATATCTCTTTACACGCACCTTCTCCATGGTCTCTTTGCTACTaGGGAATGAGCATTTACCTGCACTCCAAGGCTTCAGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: KYISLHAPSPWSLCY*GMSIYLHSKASEGL
Trigger: CAGTCCCTCTGAAGCCTTGGAGTGCAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGAGATATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGGGCCCTGTTGGACTATaGTCAAGGGGAGATATATGG +
Preference number: 2 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTGPVGL*SRGDIW
Trigger: CCATATATCTCCCCTTGATCATAGTCCAACAGGGCC...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR GCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCATGGGCTCACTGTTGGTaGCTGAGGTTCCTTGAAGGT +
Preference number: 2 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPWAHCW*LRFLEG
Trigger: ACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCA...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTATTTACAATAGCCCCCTaGGCTCTTGCATCAAGAGCC +
Preference number: 2 (lower is better)
Translates to: THTHTHTLGKHPICEPVLFTIAP*ALASRA
Trigger: GGCTCTTGATGCAAGAGCCCAGGGGGCTATTGTAAA...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTACCAATGGCCCCACATaGTGTCTCCAATTAACCTAC +
Preference number: 2 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPTNGPT*CLQLTY
Trigger: GTAGGTTAATTGGAGACACCATGTGGGGCCATTGGT...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCATCGTGGGCTCACTGTTaGTGCCTGAGGTTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPSWAHC*CLRFLE
Trigger: TTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGA...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTAGACTGGAGCCCACCATaGAGAGATGTGTCACTGGGG +
Preference number: 2 (lower is better)
Translates to: CGIQFQNIERQENTKAILDWSPP*RDVSLG
Trigger: CCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTC...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR TCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGATGATGGTGTTGACCTaGGGAATCTTCAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTMMVLT*GIFRQK
Trigger: CTTCTGCCTGAAGATTCCTCAGGTCAACACCATCAT...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGGTCCATTTTGGGTGTaGTTCCATCTGATTAAGAAC +
Preference number: 2 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDGPFWV*FHLIKN
Trigger: GTTCTTAATCAGATGGAACCACACCCAAAATGGACC...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTATAGCAAAGAGGCTATaGCCTATGGCTTTTTCATCT +
Preference number: 2 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGIAKRL*PMAFSS
Trigger: AGATGAAAAAGCCATAGGTCATAGCCTCTTTGCTAT...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR GCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGAAGAGCCTTGACAATTaGCATGGGGCATCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGKSLDN*HGASSK
Trigger: CTTGCTGGATGCCCCATGGCAATTGTCAAGGCTCTT...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATATCTTGCTGTCTCACCTaGATAGCAAAGGACCCATTT +
Preference number: 2 (lower is better)
Translates to: PQKSFGLAFQHQESSVCISCCLT*IAKDPF
Trigger: AAATGGGTCCTTTGCTATCCAGGTGAGACAGCAAGA...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGTGGGGGTCCATTTTaGGTGTGGTTCCATCTGATT +
Preference number: 2 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPSGGPF*VWFHLI
Trigger: AATCAGATGGAACCACACCCAAAATGGACCCCCACT...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTAGGGAGATATATGGTCTaGGAAGGTAGTGGGGGTCCA +
Preference number: 2 (lower is better)
Translates to: CGIQFQNIERQENTKAILGRYMV*EGSGGP
Trigger: TGGACCCCCACTACCTTCCCAGACCATATATCTCCC...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CAA 90 bp CTTACAAAAATATATCTCTTTACACGCACCTTCTCCATGGTCTCTTaGCTACTTGGGAATGAGCATTTACCTGCACTCCAAGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: LTKIYLFTRTFSMVS*LLGNEHLPALQGFR
Trigger: TCTGAAGCCTTGGAGTGCAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGAGATATATTTTTGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGGTCAAATTCTGCACATaGCATGTGACCATCCTCGTG +
Preference number: 2 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGVKFCT*HVTILV
Trigger: CACGAGGATGGTCACATGCCATGTGCAGAATTTGAC...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR TCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGATAGCAAAGAGGCTATaGCCTATGGCTTTTTCATCT +
Preference number: 2 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTIAKRL*PMAFSS
Trigger: AGATGAAAAAGCCATAGGTCATAGCCTCTTTGCTAT...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR TCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTACCCTCCACTGCTTCATaGAAGAAGACTAAAAATTCT +
Preference number: 2 (lower is better)
Translates to: THTHTHTLGKHPICEPVLPSTAS*KKTKNS
Trigger: AGAATTTTTAGTCTTCTTTCATGAAGCAGTGGAGGG...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAGAAGGGACAAGCATCTaGGGCCAAGTTTTTACAATA +
Preference number: 2 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPEGTSI*GQVFTI
Trigger: TATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTC...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTAGAGGCTATGACCTATaGCTTTTTCATCTACATAAT +
Preference number: 2 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGRGYDL*LFHLHN
Trigger: ATTATGTAGATGAAAAAGCCATAGGTCATAGCCTCT...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCCGGTGCCAGCACTTCTaGGGTGGAGATGAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: SCPGGGKASSSFLRSSVARCQHF*GGDEKG
Trigger: CCCCTTCTCATCTCCACCCAAGAAGTGCTGGCACCG...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 72 bp CGGTACAAAATACATTCAGAGCCCCCTGGGTGGGCCTaGGGCAGCCCAAATCCTACAGATGAGGGAATTGGG +
Preference number: 3 (lower is better)
Translates to: RYKIHSEPPGWA*GSPNPTDEGIG
Trigger: CCCAATTCCCTCATCTGTAGGATTTGGGCTGCCCCAGGCCCACCCAGGGGGCTCTGAATGTATTTTGTACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp ATCCTCGTGGGCTCACTGTTGGTGCCTGAGGTTCCTTaGAGGTGGTATCAGGATCTCAAGGTCACCTCCTGG +
Preference number: 3 (lower is better)
Translates to: ILVGSLLVPEVP*RWYQDLKVTSW
Trigger: CCAGGAGGTGACCTTGAGATCCTGATACCACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp GAAGCTTGTGGTCAGAGGGGACCACCAGCAAAGAACTaGCCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGA +
Preference number: 3 (lower is better)
Translates to: EACGQRGPPAKN*PRSWTKSLPER
Trigger: TCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTGGTGGTCCCCTCTGACCACAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 72 bp CCTGGACACAGCATGGATAGAAAGGGGCAGGGTTCATaGCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTG +
Preference number: 3 (lower is better)
Translates to: PGHSMDRKGQGS*PGGGKASSSFL
Trigger: CAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTTTCTATCCATGCTGTGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCTAATCCCTGTGCCCTaGCTTTGCATGGCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTLIPVP*LCMARF
Trigger: GAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp GCATGTGACCATCCTCGTGGGCTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTATCAGGATCTCAAGGT +
Preference number: 3 (lower is better)
Translates to: ACDHPRGLTVGA*GSLKVVSGSQG
Trigger: ACCTTGAGATCCTGATACCACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGAGGATGGTCACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp GGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTaGCCATCCTCGTGGGCTCACTGTTGGTGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: GLSLKSNSAHGM*PSSWAHCWCLR
Trigger: CCTCAGGCACCAACAGTGAGCCCACGAGGATGGTCACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp AAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATaGTCAAGGGGAGATATATGGTCTGGGAAGGTAGTG +
Preference number: 3 (lower is better)
Translates to: KGPPREAGPVGL*SRGDIWSGKVV
Trigger: CACTACCTTCCCAGACCATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCCTTGCATCAAGAGCCTaGACAATTGCCATGGGGCAT +
Preference number: 3 (lower is better)
Translates to: SCPGGGKASSSFLRSSVALASRA*TIAMGH
Trigger: ATGCCCCATGGCAATTGTCAAGGCTCTTGATGCAAG...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 72 bp TCAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATaGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCA +
Preference number: 3 (lower is better)
Translates to: SEGQCKTDWSPP*RDVSLGLSLKS
Trigger: TGACTTAAGAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 72 bp GTTTGGACTGGGTGGGAAGCTACTGGTATCCAGGGTTaGGGAAGAGATGGGACTCTGGACCAACACTTTGTA +
Preference number: 3 (lower is better)
Translates to: VWTGWEATGIQG*GRDGTLDQHFV
Trigger: TACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACCAGTAGCTTCCCACCCAGTCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTCATGCAGGAAACTCATaGAAGGCAAAGAGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFHAGNS*KAKSSQ
Trigger: TTGGCTGCTCTTTGCCTTCAATGAGTTTCCTGCATG...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGGGAAGCTGGCCCTGTaGGACTATGATCAAGGGGAG +
Preference number: 3 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQGKLAL*DYDQGE
Trigger: CTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTTCTTCAGGCAGAAGCTaGTGGTCAGAGGGGACCACC +
Preference number: 3 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPSSGRS*WSEGTT
Trigger: GGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGA...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR TCA 72 bp CAATGGCCCCACATGGTGTCTCCAATTAACCTACTGTaGGCACCATTACCTCCCCACACTATCCAGGATGTC +
Preference number: 3 (lower is better)
Translates to: QWPHMVSPINLL*APLPPHTIQDV
Trigger: GACATCCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGTGGGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 72 bp AAGTGTGCCACAGGTCTAATCCCTGTGCCCTTGCTTTaGATGGCCAGGTTCCAAGGGGCGGAATGTATTAAT +
Preference number: 3 (lower is better)
Translates to: KCATGLIPVPLL*MARFQGAECIN
Trigger: ATTAATACATTCCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAGACCTGTGGCACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 72 bp TACACACAGAGGCACGTAATTCTCCCTGAGCAGCTATaGCAGAGTCACACAGGCACAAAGCAGTTATACACC +
Preference number: 3 (lower is better)
Translates to: YTQRHVILPEQL*QSHTGTKQLYT
Trigger: GGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATAGCTGCTCAGGGAGAATTACGTGCCTCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGCTTGCATCAAGAGCCTaGACAATTGCCATGGGGCAT +
Preference number: 3 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQLASRA*TIAMGH
Trigger: ATGCCCCATGGCAATTGTCAAGGCTCTTGATGCAAG...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAGGGAAGCTGGCCCTGTaGGACTATGATCAAGGGGAG +
Preference number: 3 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIGKLAL*DYDQGE
Trigger: CTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCC...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCACAACACTTTGTAAGATaGATGCTCCGTGATTTAGGT +
Preference number: 3 (lower is better)
Translates to: VDLRNLQAEACGQRGPPAQHFVR*MLRDLG
Trigger: ACCTAAATCACGGAGCATCAATCTTACAAAGTGTTG...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp CTTCCCAGCAATCTTTCTTTAGAACAGAAGGTGGCCTaGGTTAAACATCGGTGCCAGCACTTCTTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: LPSNLSLEQKVA*VKHRCQHFLGG
Trigger: TCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTCTAAAGAAAGATTGCTGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp AAGGTAGTGGGGGTCCATTTTGGGTGTGGTTCCATCTaGTTAAGAACACTCTTGCTGTCTCACCTGGATAGC +
Preference number: 3 (lower is better)
Translates to: KVVGVHFGCGSI*LRTLLLSHLDS
Trigger: GCTATCCAGGTGAGACAGCAAGAGTGTTCTTAATCAGATGGAACCACACCCAAAATGGACCCCCACTACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR TCA 72 bp AAGGCAATTTTACACACAGAGGCACGTAATTCTCCCTaGGCAGCTATGCCAGAGTCACACAGGCACAAAGCA +
Preference number: 3 (lower is better)
Translates to: KAILHTEARNSP*AAMPESHRHKA
Trigger: TGCTTTGTGCCTGTGTGACTCTGGCATAGCTGCTCAGGGAGAATTACGTGCCTCTGTGTGTAAAATTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR GCA 72 bp TCACACAGGCACAAAGCAGTTATACACCAACCCGCCTaGCACCCCGAACATTTTCTGTCTATCTCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: SHRHKAVIHQPA*HPEHFLSISVS
Trigger: AGAAACAGAGATAGACAGAAAATGTTCGGGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGCATGCAGGAAACTCATaGAAGGCAAAGAGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQHAGNS*KAKSSQ
Trigger: TTGGCTGCTCTTTGCCTTCAATGAGTTTCCTGCATG...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACAGAAATCCTTCGGTTaGGCATTTCAGCATCAAGAG +
Preference number: 3 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKQKSFG*AFQHQE
Trigger: CTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGGAACTGACCCAGGTCTaGGACCAAGAGTCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTELTQV*DQESPR
Trigger: TCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTC...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CAA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTACTTGCATCAAGAGCCTaGACAATTGCCATGGGGCAT +
Preference number: 3 (lower is better)
Translates to: THTHTHTLGKHPICEPVLLASRA*TIAMGH
Trigger: ATGCCCCATGGCAATTGTCAAGGCTCTTGATGCAAG...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR-3UTR CAA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATCAGAAATCCTTCGGTTaGGCATTTCAGCATCAAGAG +
Preference number: 3 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDQKSFG*AFQHQE
Trigger: CTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTG...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGATTCTCCATGGTCTCTTaGCTACTTGGGAATGAGCAT +
Preference number: 3 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGFSMVS*LLGNEH
Trigger: ATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAA...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR TCA 72 bp CATCAACAAAACTCGCATTTAATGATGGTGTTGACCTaGGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: HQQNSHLMMVLT*GIFRQKLVVRG
Trigger: CCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAGTTTTGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR GCA 72 bp CTCCTTTACACGGGTGCAATTCCATACACAAGGACCTaGACAGACTCATTACAAATAAGATGGTCATACCGG +
Preference number: 3 (lower is better)
Translates to: LLYTGAIPYTRT*TDSLQIRWSYR
Trigger: CCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CCA 72 bp AGATATATGGTCTGGGAAGGTAGTGGGGGTCCATTTTaGGTGTGGTTCCATCTGATTAAGAACACTCTTGCT +
Preference number: 3 (lower is better)
Translates to: RYMVWEGSGGPF*VWFHLIKNTLA
Trigger: AGCAAGAGTGTTCTTAATCAGATGGAACCACACCCAAAATGGACCCCCACTACCTTCCCAGACCATATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTCAGAAATCCTTCGGTTaGGCATTTCAGCATCAAGAG +
Preference number: 3 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPQKSFG*AFQHQE
Trigger: CTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTG...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR-3UTR CAA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACTAATCCCTGTGCCCTaGCTTTGCATGGCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: CGIQFQNIERQENTKAILLIPVP*LCMARF
Trigger: GAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAG...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR TCA 72 bp GACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTaGTTTAGGTCCTCAGAAATCCTTCGGTTTGGCATT +
Preference number: 3 (lower is better)
Translates to: DSGPTLCKIDAP*FRSSEILRFGI
Trigger: AATGCCAAACCGAAGGATTTCTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CCA 72 bp TACACAAGGACCTGCACAGACTCATTACAAATAAGATaGTCATACCGGCAACTTGTGGGATACAGTTTCAAA +
Preference number: 3 (lower is better)
Translates to: YTRTCTDSLQIR*SYRQLVGYSFK
Trigger: TTTGAAACTGTATCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCTTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CCA 72 bp TTACAAAAATATATCTCTTTACACGCACCTTCTCCATaGTCTCTTTGCTACTTGGGAATGAGCATTTACCTG +
Preference number: 3 (lower is better)
Translates to: LQKYISLHAPSP*SLCYLGMSIYL
Trigger: CAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGAGATATATTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCGCAGCCGGTCCTCCCTaGCAGCCACGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAAAGPP*QPRPAG
Trigger: GCCTGCTGGGCGTGGCTGTCAGGGAGGACCGGCTGC...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTCCACGCCCAGCAGGCTaGCCATCCGGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFPRPAG*PSGPAG
Trigger: TCCAGCTGGGCCGGATGGTCAGCCTGCTGGGCGTGG...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCCACGCCCAGCAGGCTaGCCATCCGGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLPRPAG*PSGPAG
Trigger: TCCAGCTGGGCCGGATGGTCAGCCTGCTGGGCGTGG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCGCAGCCGGTCCTCCCTaGCAGCCACGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTAAGPP*QPRPAG
Trigger: GCCTGCTGGGCGTGGCTGTCAGGGAGGACCGGCTGC...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAAAAGCCGGGCTCCTGTaGGCCTGGCGCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQKAGLL*AWRSGG
Trigger: CCCGCCCGAGCGCCAGGCTCACAGGAGCCCGGCTTT...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR GCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTCTCAGCTGGGCCTCCTaGAGCAGCGGGGTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFLSWAS*SSGVRL
Trigger: CAGGCGAACCCCGCTGCTGCAGGAGGCCCAGCTGAG...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCAGCCAGTCCAGTGTGTaGGTGGCCCACCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPSQSSV*VAHHGA
Trigger: TGCCCCGTGGTGGGCCACTCACACACTGGACTGGCT...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCTCAGCTGGGCCTCCTaGAGCAGCGGGGTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYLSWAS*SSGVRL
Trigger: CAGGCGAACCCCGCTGCTGCAGGAGGCCCAGCTGAG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAACGCCGCCGCACACGCTaGCTCGCTCGCCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQRRRTR*LARPCT
Trigger: AGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCG...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACGTGGCAGGCGGTGCCTaGAAGAGCTGCCAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDVAGGA*KSCQRV
Trigger: TACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCAC...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCCACAGTGGCAGGCGGTaGCTGCAAGAGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAHSGRR*LQELPA
Trigger: CGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTG...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCTCGCTGCCTCGCCGCTaGCTCCTTGGCTGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPSLPRR*LLGCLA
Trigger: AGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGA...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAGCGGGGTTCGCCTaGTTCCCCGAGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKAAGFA*FPETAG
Trigger: GCCCGCTGTCTCGGGGAACCAGGCGAACCCCGCTGC...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGCCCCCTGGGTGGGCCTaGGGCAGCCCAAATCCTACA +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWPPGWA*GSPNPT
Trigger: TGTAGGATTTGGGCTGCCCCAGGCCCACCCAGGGGG...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCTCAGAGCCCCCTGGGTaGGCCTGGGGCAGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLSEPPG*AWGSPN
Trigger: ATTTGGGCTGCCCCAGGCCCACCCAGGGGGCTCTGA...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGGACAACCCTCCCCTTaGGGGCTCGGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKGQPSP*GLGSRL
Trigger: GAGCCTGGAGCCGAGCCCTCAAGGGGAGGGTTGTCC...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGTGTAGGGGTTGCGGATaGGCAGGATGGCGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWCRGCG*AGWRRR
Trigger: TCGACGCCGCCATCCTGCTCATCCGCAACCCCTACA...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGCCACGCCCAGCAGGCTaGCCATCCGGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLPRPAG*PSGPAG
Trigger: TCCAGCTGGGCCGGATGGTCAGCCTGCTGGGCGTGG...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGCGCCGCCGCACACGCTaGCTCGCTCGCCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRRRRTR*LARPCT
Trigger: AGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCG...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGGCAGCGGGGTTCGCCTaGTTCCCCGAGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRAAGFA*FPETAG
Trigger: GCCCGCTGTCTCGGGGAACCAGGCGAACCCCGCTGC...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCGCGGGAATCGGGTGGTaGGAAACCCACAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLAGIGW*ETHSGR
Trigger: CCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGC...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCTGGAACCCAGAGTGGTaGGGGCAGGGACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAWNPEW*GQGPRR
Trigger: TCTCCTGGGTCCCTGCCCCCACCACTCTGGGTTCCA...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCTGGAACCCAGAGTGGTaGGGGCAGGGACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLWNPEW*GQGPRR
Trigger: TCTCCTGGGTCCCTGCCCCCACCACTCTGGGTTCCA...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTTCCCATCCTTGCCCTTaGACCAGGGTCCGTACCTGC +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFSHPCP*TRVRTC
Trigger: GCAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGA...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGCAGCCGGTCCTCCCTaGCAGCCACGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDAAGPP*QPRPAG
Trigger: GCCTGCTGGGCGTGGCTGTCAGGGAGGACCGGCTGC...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTGAGCTTCCGGAGCCCTaGGCGCTTGAAGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFELPEP*ALEVAI
Trigger: GATGGCAACTTCAAGCGCTCAGGGCTCCGGAAGCTC...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGTGCCTCGCTCGCCCTTaGACTCCATGTCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWCLARP*TPCRTL
Trigger: CAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCA...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCTGCACTTCCATACCTaGGGGCCGACTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTLHFHT*GPTPGP
Trigger: TGGCCCAGGAGTCGGCCCGCAGGTATGGAAGTGCAG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACAAAGGTTGTCGGGCCTaGGGAAGCAGCCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDKGCRA*GSSPGT
Trigger: TGTTCCGGGGCTGCTTCCGCAGGCCCGACAACCTTT...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGGCGAGCCCACGTGTTaGCAGCACCTGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAGEPTC*QHLGSW
Trigger: CCAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACGTGTGCGCCTTGAATTaGAGCAGCGGCGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDVCALN*SSGDSG
Trigger: ACCGCTGTCGCCGCTGCTGCAATTCAAGGCGCACAC...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCGTGGGAAACCCACAGTaGCAGGCGGTGCCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAVGNPQ*QAVPAR
Trigger: TCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCAC...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGTCCGCGCTGCACTTCTaGGCACAGAGCTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWSALHF*AQSCSS
Trigger: GGATGAGCAGCTCTGTGCCCAGAAGTGCAGCGCGGA...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTCCTCCCTCCCACAAATaGAACCCAGAGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFPPSHK*NPEWWG
Trigger: CCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGG...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGGCGCGCCCGCTCTGTaGGCGCCTTCCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDGAPAL*APSQLL
Trigger: CAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCC...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR TCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGCTGTGGCCAATTCAATaGGGTGGCGAGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWLWPIQ*GGEPTC
Trigger: ACACGTGGGCTCGCCACCTCATTGAATTGGCCACAG...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACANSAS*AQQAPG
Trigger: CCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGC...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR GCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCTCAGCTGGGCCTCCTaGAGCAGCGGGGTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSLSWAS*SSGVRL
Trigger: CAGGCGAACCCCGCTGCTGCAGGAGGCCCAGCTGAG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATCGCCGCCGCACACGCTaGCTCGCTCGCCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDRRRTR*LARPCT
Trigger: AGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCG...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGCAGCCCCGGAACACTaGACTTCCATACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAAAPEH*TSIPAG
Trigger: GCCCGCAGGTATGGAAGTGCAGTGTTCCGGGGCTGC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCGGCGAGCCCACGTGTTaGCAGCACCTGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSGEPTC*QHLGSW
Trigger: CCAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCC...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTGGCGAGCCCACGTGTTaGCAGCACCTGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTGEPTC*QHLGSW
Trigger: CCAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCC...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCCCTTCCAGTGGGCATaGGCAGCAAAGCCTATGTGG +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLPFQWA*AAKPMW
Trigger: CCACATAGGCTTTGCTGCGCATGCCCACTGGAAGGG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCAAGGGGCAGGGTTCATaGCCTGGAGGTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPKGQGS*PGGGKA
Trigger: TGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTT...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCTGGTACGGCTCCTTTaGCCTTCCAGTGGGCATGCG +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYLVRLL*PSSGHA
Trigger: CGCATGCCCACTGGAAGGGCAAAGGAGCCGTACCAG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR GCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCACCAAGGCTCCTCCTaGCGGGCCCTGGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKHQGSS*RALGLF
Trigger: AAATAGCCCCAGGGCCCGGCAGGAGGAGCCTTGGTG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGCAGCGGGGTTCGCCTaGTTCCCCGAGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDAAGFA*FPETAG
Trigger: GCCCGCTGTCTCGGGGAACCAGGCGAACCCCGCTGC...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACGCAGCAAAGCCTATGTaGCCGCCGTACTTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDAAKPM*PPYLRL
Trigger: CAACCGCAAGTACGGCGGCCACATAGGCTTTGCTGC...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATAAATGGAACCCAGAGTaGTGGGGGCAGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYKWNPE*WGQGPR
Trigger: CCTGGGTCCCTGCCCCCACCACTCTGGGTTCCATTT...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTTCAGGCAGAAGCTTGTaGTCAGAGGGGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFSGRSL*SEGTTS
Trigger: GCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGA...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGTCGCCGCTGCCTCCTTaGCTGCCTTGCTCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQSPLPP*LPCSLP
Trigger: GGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGA...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
3UTR CAA 72 bp TTGGGGAAGTGTGCCACAGGTCTAATCCCTGTGCCCTaGCTTTGCATGGCCAGGTTCCAAGGGGCGGAATGT +
Preference number: 4 (lower is better)
Translates to: LGKCATGLIPVP*LCMARFQGAEC
Trigger: ACATTCCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAGACCTGTGGCACACTTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCTCCTGATGTCCTGGTaGTACAGCAGCTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDLLMSW*YSSWVH
Trigger: ATGCACCCAGCTGCTGTATCACCAGGACATCAGGAG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR TCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCGCTTGGCTGAGGCCATaGGAAAGGATGGAGCTTACC +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPAWLRP*ERMELT
Trigger: GGTAAGCTCCATCCTTTCTCATGGCCTCAGCCAAGC...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGTCCCATCCTTGCCCTTaGACCAGGGTCCGTACCTGC +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKSHPCP*TRVRTC
Trigger: GCAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGA...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCTCCCATCCTTGCCCTTaGACCAGGGTCCGTACCTGC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLASHPCP*TRVRTC
Trigger: GCAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGA...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCTGTGGCCAATTCAATaGGGTGGCGAGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTLWPIQ*GGEPTC
Trigger: ACACGTGGGCTCGCCACCTCATTGAATTGGCCACAG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCGCTTTCGTGCGTCTTaGTGCAGATGGTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLARFRAS*CRWSVR
Trigger: GCGGACGGACCATCTGCATCAAGACGCACGAAAGCG...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAGGAGCCCTGAGCGCTTaGAGTTGCCATCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMRGALSA*SCHPSG
Trigger: GCCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCC...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCTTAGGTTCCGCCCTTTaGGGGCTGCATCCACCATCT +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVALGSAL*GLHPPS
Trigger: AGATGGTGGATGCAGCCCTCAAAGGGCGGAACCTAA...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCCAAAGAGAGGACAGATaGGTGGGGGTAACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAQREDR*VGVTRG
Trigger: ACCCCTGGTTACCCCCACTCATCTGTCCTCTCTTTG...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGCAAGCAGCTCATTTCTaGGAAGCAGTGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWQAAHF*EAVWPG
Trigger: CCCAGGCCACACTGCTTCTCAGAAATGAGCTGCTTG...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATTCTGCACATGGCATGTaGCCATCCTCGTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYSAHGM*PSSWAH
Trigger: GTGAGCCCACGAGGATGGTCACATGCCATGTGCAGA...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCCACCAGCAAAGAACTaGCCCAGGTCTTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDPPAKN*PRSWTK
Trigger: CTTGGTCCAAGACCTGGGTCAGTTCTTTGCTGGTGG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCGGGGCTTGGCTGGGGTaGTTGGGAGAGGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAGAWLG*LGEDGR
Trigger: CCTTCCATCCTCTCCCAAGCACCCCAGCCAAGCCCC...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGACCAGGGTCCGTACCTaGGAGCAATGCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWTRVRT*EQCLRL
Trigger: AAGCCTCAAGCATTGCTCGCAGGTACGGACCCTGGT...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTCCATGTCGCACTCTaGCTCGCTCACGTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLALHVAL*LAHVRR
Trigger: GCGACGAACGTGAGCGAGGCAGAGTGCGACATGGAG...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATGCCTCGCTCGCCCTTaGACTCCATGTCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQCLARP*TPCRTL
Trigger: CAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCA...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCGCAGCCCCGGAACACTaGACTTCCATACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAAAPEH*TSIPAG
Trigger: GCCCGCAGGTATGGAAGTGCAGTGTTCCGGGGCTGC...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCAAACTCCTCCGCGCTaGACTTCTGGGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYQTPPR*TSGHRA
Trigger: AGCTCTGTGCCCAGAAGTGCAGCGCGGAGGAGTTTG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCGCCAAAGCAATGAGCTaGTTGGACTTGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAAKAMS*LDLPGR
Trigger: CCTGCCAGGCAAGTCCAAGCAGCTCATTGCTTTGGC...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTAGGCTTCAGAGGGACTaGCTAGGGAGGCTACTCCAA +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFRLQRD*LGRLLQ
Trigger: TTGGAGTAGCCTCCCTAGGCAGTCCCTCTGAAGCCT...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATGCCACTTGCAAACTCTaGCAGCTGAGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYATCKL*QLSSAG
Trigger: GCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGC...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAACCTCCTTGGCTGCCTTaGTCGCTCCCCTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQPPWLP*SLPWTS
Trigger: TGAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGG...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCTGGCTCTCTGGGGCTTaGCTGGGGTGCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSWLSGA*LGCLGE
Trigger: CTCTCCCAAGCACCCCAGCCAAGCCCCAGAGAGCCA...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATAGACAGAGAGGCGGTTaGCGCCGCCGCACACGCTGC +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDRQRGG*RRRTRC
Trigger: GCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGTCT...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCGGAGCGGGAATCGGGTaGTGGGAAACCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSGAGIG*WETHSG
Trigger: GCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCC...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGTCCGCGCTGCACTTCTaGGCACAGAGCTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKSALHF*AQSCSS
Trigger: GGATGAGCAGCTCTGTGCCCAGAAGTGCAGCGCGGA...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCGCCAATTCAATGAGGTaGCGAGCCCACGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAANSMR*RAHVLP
Trigger: TGGCAACACGTGGGCTCGCCACCTCATTGAATTGGC...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACGCCAATTCAATGAGGTaGCGAGCCCACGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDANSMR*RAHVLP
Trigger: TGGCAACACGTGGGCTCGCCACCTCATTGAATTGGC...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCGACTGGAGCCCACCATaGAGAGATGTGTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTDWSPP*RDVSLG
Trigger: CCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTC...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATGACTGGAGCCCACCATaGAGAGATGTGTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYDWSPP*RDVSLG
Trigger: CCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTC...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGGCCTCTTCCCCAGCTaGAGACCAAGCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKGLFPS*RPSLAF
Trigger: AAAGGCCAAGCTTGGTCTTCAGCTGGGGAAGAGGCC...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTCCTGCGAGCAATGCTTaGGGCTTCACCTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTPASNA*GFTCVP
Trigger: CGGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGG...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCTGTGGCCAATTCAATaGGGTGGCGAGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKLWPIQ*GGEPTC
Trigger: ACACGTGGGCTCGCCACCTCATTGAATTGGCCACAG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTCGCTTTCGTGCGTCTTaGTGCAGATGGTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTRFRAS*CRWSVR
Trigger: GCGGACGGACCATCTGCATCAAGACGCACGAAAGCG...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTTGTAGGGGTTGCGGATaGGCAGGATGGCGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPCRGCG*AGWRRR
Trigger: TCGACGCCGCCATCCTGCTCATCCGCAACCCCTACA...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCTGTAGGGGTTGCGGATaGGCAGGATGGCGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSCRGCG*AGWRRR
Trigger: TCGACGCCGCCATCCTGCTCATCCGCAACCCCTACA...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCGAGCTTCCGGAGCCCTaGGCGCTTGAAGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSELPEP*ALEVAI
Trigger: GATGGCAACTTCAAGCGCTCAGGGCTCCGGAAGCTC...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCTTAGGTTCCGCCCTTTaGGGGCTGCATCCACCATCT +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTLGSAL*GLHPPS
Trigger: AGATGGTGGATGCAGCCCTCAAAGGGCGGAACCTAA...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCAAGCAGCTCATTTCTaGGAAGCAGTGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTQAAHF*EAVWPG
Trigger: CCCAGGCCACACTGCTTCTCAGAAATGAGCTGCTTG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCACGTACCTGCGAGCAATaGTTGAGGCTTCACCTGTGT +
Preference number: 4 (lower is better)
Translates to: VDLRNLQAEACGQRGPPARTCEQ*LRLHLC
Trigger: ACACAGGTGAAGCCTCAAGCATTGCTCGCAGGTACG...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGCTCCATGTCGCACTCTaGCTCGCTCACGTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRLHVAL*LAHVRR
Trigger: GCGACGAACGTGAGCGAGGCAGAGTGCGACATGGAG...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCTGCACTTCCATACCTaGGGGCCGACTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSLHFHT*GPTPGP
Trigger: TGGCCCAGGAGTCGGCCCGCAGGTATGGAAGTGCAG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGCAGCCCCGGAACACTaGACTTCCATACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQAAPEH*TSIPAG
Trigger: GCCCGCAGGTATGGAAGTGCAGTGTTCCGGGGCTGC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGAAAGGTTGTCGGGCCTaGGGAAGCAGCCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLKGCRA*GSSPGT
Trigger: TGTTCCGGGGCTGCTTCCGCAGGCCCGACAACCTTT...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCACAGTGGCAGGCGGTaGCTGCAAGAGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGHSGRR*LQELPA
Trigger: CGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTG...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCTTCTGGGCACAGAGCTaGTCATCCTCTCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPFWAQS*SSSLSW
Trigger: CCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAA...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTTCTGGCCGCTTTCGTaGGTCTTGATGCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDFWPLS*VLMQMV
Trigger: GACCATCTGCATCAAGACGCACGAAAGCGGCCAGAA...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCCCTTCCAGTGGGCATaGGCAGCAAAGCCTATGTGG +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKPFQWA*AAKPMW
Trigger: CCACATAGGCTTTGCTGCGCATGCCCACTGGAAGGG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCCGCCCTTTGAGGGCTaGATCCACCATCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDPPFEG*IHHLDV
Trigger: TACATCAAGATGGTGGATGCAGCCCTCAAAGGGCGG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCAGCCCCCTGGGCTCTTaGATCAAGAGCCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPSPLGS*IKSLDN
Trigger: ATTGTCAAGGCTCTTGATGCAAGAGCCCAGGGGGCT...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTGGGCTCACTGTTGGTaGCTGAGGTTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDWAHCW*LRFLEG
Trigger: ACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCA...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCTCCCTGAGCAGCTATaGCAGAGTCACACAGGCACA +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTLPEQL*QSHTGT
Trigger: TGTGCCTGTGTGACTCTGGCATAGCTGCTCAGGGAG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGTCAAGGGGCATCCTCTaGGCCTCCAGCGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLSRGIL*ASSGKV
Trigger: CACTTTCCCGCTGGAGGCGCAGAGGATGCCCCTTGA...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCGGCCTTTCTACCTCATaGGAACAGAAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTGLSTS*EQKLVG
Trigger: GCCCACCAGCTTCTGTTCCCATGAGGTAGAAAGGCC...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCATCAGGCCAATGGATCTaGGTTATTTCACTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VDLRNLQAEACGQRGPPASGQWI*VISLGA
Trigger: GGCCCCCAGTGAAATAACCCAGATCCATTGGCCTGA...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGCGGCGGAAGTACCGCTaGAATTTGAACCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWRRKYR*NLNQSL
Trigger: CAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCG...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCGTAGTCGCCAAGCTTaGCTCTCTCATTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLRSRQA*LSHSHP
Trigger: AGGATGGGAATGAGAGAGCCAAGCTTGGCGACTACG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTCAGACATGTTCAGCATaGCAGCTGTCACGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFQTCSA*QLSRVR
Trigger: CCTTACCCGTGACAGCTGCCATGCTGAACATGTCTG...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCGTGGGAAACCCACAGTaGCAGGCGGTGCCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAVGNPQ*QAVPAR
Trigger: TCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCAC...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTGGAGCGGGAATCGGGTaGTGGGAAACCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACGAGIG*WETHSG
Trigger: GCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCC...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATTCATCCTCTCTGTCATaGAGCGGGAATCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYSSSLS*SGNRVV
Trigger: CACCACCCGATTCCCGCTCCATGACAGAGAGGATGA...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCTCCGCGCTGCACTTCTaGGCACAGAGCTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSSALHF*AQSCSS
Trigger: GGATGAGCAGCTCTGTGCCCAGAAGTGCAGCGCGGA...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGCGTCCGCTGCGCCAGTaGTCCCGCTCACCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLRPLRQ*SRSPLN
Trigger: GTTTAAAGGTGAGCGGGACCACTGGCGCAGCGGACG...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAGCAGCAAAGCCTATGTaGCCGCCGTACTTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMRAAKPM*PPYLRL
Trigger: CAACCGCAAGTACGGCGGCCACATAGGCTTTGCTGC...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACGTTCCTCACGAACTCTaGCCACTCTTTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDVPHEL*PLFALP
Trigger: TGGAAGGGCAAAGAGTGGCCAGAGTTCGTGAGGAAC...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAAGTCCAGTGTGTGAGTaGCCCACCACGGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMRSPVCE*PTTGHS
Trigger: ACTATGCCCCGTGGTGGGCCACTCACACACTGGACT...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGAGTCCAGTGTGTGAGTaGCCCACCACGGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKSPVCE*PTTGHS
Trigger: ACTATGCCCCGTGGTGGGCCACTCACACACTGGACT...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCACCATCCGGCCCAGCTaGACAAAGAGGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLATIRPS*TKRSCF
Trigger: GAAGCAGGACCTCTTTGTCCAGCTGGGCCGGATGGT...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCAAAGTTGCCATCCTTCTaGCTCTCCACACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VDLRNLQAEACGQRGPPAKLPSF*LSTQSS
Trigger: GCTGCTCTGTGTGGAGAGCCAGAAGGATGGCAACTT...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGAAGTTGCCATCCTTCTaGCTCTCCACACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWKLPSF*LSTQSS
Trigger: GCTGCTCTGTGTGGAGAGCCAGAAGGATGGCAACTT...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCCAGAGTGGTAGTGCCTaGGCAATCTCTTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAQSGSA*AISSLE
Trigger: CTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTG...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACCTCCCTCCCACAAATaGAACCCAGAGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKPPSHK*NPEWWG
Trigger: CCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTAGAAGCAGTGTGGCCTaGGGGGCTCATAACACCAAT +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFRSSVA*GAHNTN
Trigger: ATTGGTGTTATGAGCCCCCCAGGCCACACTGCTTCT...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCAAGAAGCAGTGTGGCCTaGGGGGCTCATAACACCAAT +
Preference number: 4 (lower is better)
Translates to: VDLRNLQAEACGQRGPPARSSVA*GAHNTN
Trigger: ATTGGTGTTATGAGCCCCCCAGGCCACACTGCTTCT...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTTCGTGGGCTCACTGTTaGTGCCTGAGGTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFSWAHC*CLRFLE
Trigger: TTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGA...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCGGAAGCTGGCCCTGTTaGACTATGATCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLGSWPC*TMIKGR
Trigger: TCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCC...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGCCCCCAAGGGAAGCTaGCCCTGTTGGACTATGATC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAAPKGS*PCWTMI
Trigger: GATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTGGGTTGGGGAAGAGATaGGACTCTGGACCAACACTT +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFGLGKR*DSGPTL
Trigger: AAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCC...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCACTGGTATCCAGGGTTaGGGAAGAGATGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPTGIQG*GRDGTL
Trigger: CAGAGTCCCATCTCTTCCCCAACCCTGGATACCAGT...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCAGGTTTGGACTGGGTaGGAAGCTACTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLQVWTG*EATGIQ
Trigger: CTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCTGCCCTTGCTTTGCATaGCCAGGTTCCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSCPCFA*PGSKGR
Trigger: CCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCA...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTTGCCCTTGCTTTGCATaGCCAGGTTCCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTCPCFA*PGSKGR
Trigger: CCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCA...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCCTTTGCCCTTCCAGTaGGCATGCGCAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAPLPFQ*ACAAKP
Trigger: AGGCTTTGCTGCGCATGCCCACTGGAAGGGCAAAGG...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACAAGGAAAGGGGAGCCTaGATTTCCTTTCTCGCCACC +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDKERGA*ISFLAT
Trigger: GGTGGCGAGAAAGGAAATCCAGGCTCCCCTTTCCTT...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR TCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCAACATCTCCACCTCCTaGTGTCCTGGTGATACAGCA +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLNISTS*CPGDTA
Trigger: TGCTGTATCACCAGGACATCAGGAGGTGGAGATGTT...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR TCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGCTTGGCTGAGGCCATaGGAAAGGATGGAGCTTACC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAAWLRP*ERMELT
Trigger: GGTAAGCTCCATCCTTTCTCATGGCCTCAGCCAAGC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCCTGCGAGCAATGCTTaGGGCTTCACCTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLPASNA*GFTCVP
Trigger: CGGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCCTGCGAGCAATGCTTaGGGCTTCACCTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSPASNA*GFTCVP
Trigger: CGGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAGGACAACCCTCCCCTTaGGGGCTCGGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAGQPSP*GLGSRL
Trigger: GAGCCTGGAGCCGAGCCCTCAAGGGGAGGGTTGTCC...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGAGCTGGCCAAAGCAATaGGCTGCTTGGACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKSWPKQ*AAWTCL
Trigger: CAGGCAAGTCCAAGCAGCTCATTGCTTTGGCCAGCT...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTAGCCAGTCCAGTGTGTaGGTGGCCCACCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPSQSSV*VAHHGA
Trigger: TGCCCCGTGGTGGGCCACTCACACACTGGACTGGCT...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGCTGCATCCACCATCTTaGTGTAGGCAGAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWLHPPS*CRQRWS
Trigger: AGACCATCTCTGCCTACATCAAGATGGTGGATGCAG...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTTCTGCACATGGCATGTaGCCATCCTCGTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTSAHGM*PSSWAH
Trigger: GTGAGCCCACGAGGATGGTCACATGCCATGTGCAGA...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGCTCAGGGATGCCACCTaGAGGGTCTCCGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRLRDAT*RVSATC
Trigger: GCAAGTGGCGGAGACCCTTCAGGTGGCATCCCTGAG...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR GCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCTGCAGTTCACTTCTTaGCCTTTCTCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLLQFTS*PFSAPQ
Trigger: CTGAGGAGCAGAGAAAGGGCAAGAAGTGAACTGCAG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATGGAGGGCAAGTTCAATaGTTGGCTGAGGCCATGAGA +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYGGQVQ*LAEAMR
Trigger: TCTCATGGCCTCAGCCAAGCATTGAACTTGCCCTCC...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCTCCATGTCGCACTCTaGCTCGCTCACGTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLLHVAL*LAHVRR
Trigger: GCGACGAACGTGAGCGAGGCAGAGTGCGACATGGAG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTAAAGGTTGTCGGGCCTaGGGAAGCAGCCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACKGCRA*GSSPGT
Trigger: TGTTCCGGGGCTGCTTCCGCAGGCCCGACAACCTTT...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCCAAACTCCTCCGCGCTaGACTTCTGGGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSQTPPR*TSGHRA
Trigger: AGCTCTGTGCCCAGAAGTGCAGCGCGGAGGAGTTTG...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTACTCTGGCCACTCTTTaGCCTTCCAGTGGGCATGCG +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTTLATL*PSSGHA
Trigger: CGCATGCCCACTGGAAGGGCAAAGAGTGGCCAGAGT...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGTTCAGGTCCTCAAAGTaGACCACCAGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWFRSSK*TTSTFL
Trigger: CAAGAAGGTGCTGGTGGTGCACTTTGAGGACCTGAA...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTAAGAGCCTTGACAATTaGCATGGGGCATCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFKSLDN*HGASSK
Trigger: CTTGCTGGATGCCCCATGGCAATTGTCAAGGCTCTT...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAAGGCTTCAGAGGGACTaGCTAGGGAGGCTACTCCAA +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQRLQRD*LGRLLQ
Trigger: TTGGAGTAGCCTCCCTAGGCAGTCCCTCTGAAGCCT...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTCCCTGAGCAGCTATaGCAGAGTCACACAGGCACA +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLALPEQL*QSHTGT
Trigger: TGTGCCTGTGTGACTCTGGCATAGCTGCTCAGGGAG...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCTGCAGAATAACCACCTaGGTTTGGGCAGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVACRITT*VWAVEN
Trigger: GTTCTCCACTGCCCAAACCCAGGTGGTTATTCTGCA...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR CCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAATGGGGGCCTTGTTTCTaGCCTCTTCCCCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKWGPCF*PLPQLK
Trigger: CTTCAGCTGGGGAAGAGGCCAGAAACAAGGCCCCCA...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTTCTGGGTTATTTCACTaGGGGCCTTGTTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFSGLFH*GPCFWP
Trigger: AGGCCAGAAACAAGGCCCCCAGTGAAATAACCCAGA...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGGGATCATTCCGGACTaGCTCTCTGGGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQGIIPD*LSGAWL
Trigger: CAGCCAAGCCCCAGAGAGCCAGTCCGGAATGATCCC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCGGCGGAAGTACCGCTaGAATTTGAACCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTRRKYR*NLNQSL
Trigger: CAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCGTAGTCGCCAAGCTTaGCTCTCTCATTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTRSRQA*LSHSHP
Trigger: AGGATGGGAATGAGAGAGCCAAGCTTGGCGACTACG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCTCAGCACAGTTGTCCTaGCAACGGAAGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPSAQLS*QRKMVI
Trigger: GATGACCATCTTCCGTTGCCAGGACAACTGTGCTGA...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAAGACAGAGAGGCGGTTaGCGCCGCCGCACACGCTGC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIRQRGG*RRRTRC
Trigger: GCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGTCT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTAAGACAGAGAGGCGGTTaGCGCCGCCGCACACGCTGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTLGKHPICEPVLRQRGG*RRRTRC
Trigger: GCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGTCT...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCTGCTTGGACTTGCCTaGCAGGAACCTTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYLLGLA*QEPSVH
Trigger: ATGGACAGAAGGTTCCTGCCAGGCAAGTCCAAGCAG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCGTGTTGCCAGCACCTaGGAAGCTGGCCAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLARVAST*EAGQSN
Trigger: ATTGCTTTGGCCAGCTTCCCAGGTGCTGGCAACACG...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGCCAATTCAATGAGGTaGCGAGCCCACGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAANSMR*RAHVLP
Trigger: TGGCAACACGTGGGCTCGCCACCTCATTGAATTGGC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTCGTCCGCTGCGCCAGTaGTCCCGCTCACCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPRPLRQ*SRSPLN
Trigger: GTTTAAAGGTGAGCGGGACCACTGGCGCAGCGGACG...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCGTCCGCTGCGCCAGTaGTCCCGCTCACCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLRPLRQ*SRSPLN
Trigger: GTTTAAAGGTGAGCGGGACCACTGGCGCAGCGGACG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGCCTCGATCTCTTTCTaGCCGCTTTCGTGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAASISF*PLSCVL
Trigger: CAAGACGCACGAAAGCGGCCAGAAAGAGATCGAGGC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATTGGAACCCAGAGTGGTaGGGGCAGGGACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDWNPEW*GQGPRR
Trigger: TCTCCTGGGTCCCTGCCCCCACCACTCTGGGTTCCA...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTAAATGGAACCCAGAGTaGTGGGGGCAGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPKWNPE*WGQGPR
Trigger: CCTGGGTCCCTGCCCCCACCACTCTGGGTTCCATTT...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTTTTACAATAGCCCCCTaGGCTCTTGCATCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFFTIAP*ALASRA
Trigger: GGCTCTTGATGCAAGAGCCCAGGGGGCTATTGTAAA...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATTCGTGGGCTCACTGTTaGTGCCTGAGGTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYSWAHC*CLRFLE
Trigger: TTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGA...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCGGAAGCTGGCCCTGTTaGACTATGATCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTGSWPC*TMIKGR
Trigger: TCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCC...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTTGCCCTTGCTTTGCATaGCCAGGTTCCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACCPCFA*PGSKGR
Trigger: CCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCA...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCCTCCAGCGGGAAAGTaGGATAGTGTGCGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAPPAGK*DSVRLE
Trigger: TTCAAGGCGCACACTATCCCACTTTCCCGCTGGAGG...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547525.6
3UTR CAA 72 bp GTGAGCAGAGTGGTAGTGCCTGGGCAATCTCTTCCCTaGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: VSRVVVPGQSLP*SLLCHAGNSLK
Trigger: CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
3UTR CAA 72 bp CATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTaGGACTATGATCAAGGGGAGATATATGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HSLKGPQGKLAL*DYDQGEIYGLG
Trigger: TCCCAGACCATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGAGCTGGCCAAAGCAATaGGCTGCTTGGACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLSWPKQ*AAWTCL
Trigger: CAGGCAAGTCCAAGCAGCTCATTGCTTTGGCCAGCT...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAAGCCAGTCCAGTGTGTaGGTGGCCCACCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCISQSSV*VAHHGA
Trigger: TGCCCCGTGGTGGGCCACTCACACACTGGACTGGCT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAACCTTCTTGCCAAACTTaGGCCAGTCCAGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQPSCQT*ASPVCE
Trigger: CTCACACACTGGACTGGCTCAAGTTTGGCAAGAAGG...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCTGCATCCACCATCTTaGTGTAGGCAGAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYLHPPS*CRQRWS
Trigger: AGACCATCTCTGCCTACATCAAGATGGTGGATGCAG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACAAAGAGAGGACAGATaGGTGGGGGTAACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKQREDR*VGVTRG
Trigger: ACCCCTGGTTACCCCCACTCATCTGTCCTCTCTTTG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAGAACAGAAGGTGGCCTaGGTTAAACATCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQEQKVA*VKHRCQ
Trigger: CTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTC...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAGAACAGAAGGTGGCCTaGGTTAAACATCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMREQKVA*VKHRCQ
Trigger: CTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTC...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGCCACCAGCAAAGAACTaGCCCAGGTCTTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRPPAKN*PRSWTK
Trigger: CTTGGTCCAAGACCTGGGTCAGTTCTTTGCTGGTGG...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGATACAGCAGCTGGGTaGATGCAGCACTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQDTAAG*MQHSQT
Trigger: GGTCTGGGAGTGCTGCATGCACCCAGCTGCTGTATC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCTGTCCCGGAAACCTCTaGCCAGATGCATGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIACPGNL*PDACHP
Trigger: TGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACA...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAATGTCCCGGAAACCTCTaGCCAGATGCATGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKCPGNL*PDACHP
Trigger: TGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACA...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGGTGCCTGCAAGAGCTaGCAGCGGGTACTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDGACKS*QRVLLL
Trigger: GAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACC...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGGTGGCAGGCGGTGCCTaGAAGAGCTGCCAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTVAGGA*KSCQRV
Trigger: TACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCAC...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTAGTGGCAGGCGGTGCCTaGAAGAGCTGCCAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: THTHTHTLGKHPICEPVLVAGGA*KSCQRV
Trigger: TACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCAC...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCACACAGTGGCAGGCGGTaGCTGCAAGAGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAHSGRR*LQELPA
Trigger: CGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTG...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGCCAAAGCAATGAGCTaGTTGGACTTGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKAKAMS*LDLPGR
Trigger: CCTGCCAGGCAAGTCCAAGCAGCTCATTGCTTTGGC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATTCTGGCCGCTTTCGTaGGTCTTGATGCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQFWPLS*VLMQMV
Trigger: GACCATCTGCATCAAGACGCACGAAAGCGGCCAGAA...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCTTCTGGCCGCTTTCGTaGGTCTTGATGCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAFWPLS*VLMQMV
Trigger: GACCATCTGCATCAAGACGCACGAAAGCGGCCAGAA...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTACTCTGGCCACTCTTTaGCCTTCCAGTGGGCATGCG +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPTLATL*PSSGHA
Trigger: CGCATGCCCACTGGAAGGGCAAAGAGTGGCCAGAGT...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCCGCCCTTTGAGGGCTaGATCCACCATCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKPPFEG*IHHLDV
Trigger: TACATCAAGATGGTGGATGCAGCCCTCAAAGGGCGG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCAAGAGCCTTGACAATTaGCATGGGGCATCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTKSLDN*HGASSK
Trigger: CTTGCTGGATGCCCCATGGCAATTGTCAAGGCTCTT...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAAGCCCCCTGGGCTCTTaGATCAAGAGCCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMRSPLGS*IKSLDN
Trigger: ATTGTCAAGGCTCTTGATGCAAGAGCCCAGGGGGCT...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGAAGGGGCAGGGTTCATaGCCTGGAGGTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQKGQGS*PGGGKA
Trigger: TGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTT...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATGGGCTCACTGTTGGTaGCTGAGGTTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQWAHCW*LRFLEG
Trigger: ACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCA...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCAGGCTTCAGAGGGACTaGCTAGGGAGGCTACTCCAA +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIARLQRD*LGRLLQ
Trigger: TTGGAGTAGCCTCCCTAGGCAGTCCCTCTGAAGCCT...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCATACACCAACCCGCCTaGCACCCCGAACATTTTCTG +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAIHQPA*HPEHFL
Trigger: CAGAAAATGTTCGGGGTGGCAGGCGGGTTGGTGTAT...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGATACACCAACCCGCCTaGCACCCCGAACATTTTCTG +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKIHQPA*HPEHFL
Trigger: CAGAAAATGTTCGGGGTGGCAGGCGGGTTGGTGTAT...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCTGGCTCTCTCTCGCTaGCTCGCCGCTGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTLALSR*LAAASL
Trigger: CAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCCCACTAGGAGTGGCTaGTCCAGCAGAGATTTTATG +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTPTRSG*SSRDFM
Trigger: CATAAAATCTCTGCTGGACCAGCCACTCCTAGTGGG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCGGCGGAAGTACCGCTaGAATTTGAACCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLARRKYR*NLNQSL
Trigger: CAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCG...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGAGCAGCCGATGTACTTaGCTCGCTCTTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKSSRCT*LALPPS
Trigger: AGAAGGAGGAAGAGCGAGCCAAGTACATCGGCTGCT...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCAGACATGTTCAGCATaGCAGCTGTCACGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKQTCSA*QLSRVR
Trigger: CCTTACCCGTGACAGCTGCCATGCTGAACATGTCTG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTGGAGCGGGAATCGGGTaGTGGGAAACCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPGAGIG*WETHSG
Trigger: GCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCC...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGTTCCTCACGAACTCTaGCCACTCTTTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAVPHEL*PLFALP
Trigger: TGGAAGGGCAAAGAGTGGCCAGAGTTCGTGAGGAAC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGACCATCCGGCCCAGCTaGACAAAGAGGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQTIRPS*TKRSCF
Trigger: GAAGCAGGACCTCTTTGTCCAGCTGGGCCGGATGGT...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGCAAGTCTCCATGATGTaGATGAGCCCTCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLQVSMM*MSPPSH
Trigger: GTGGGAGGGAGGGCTCATCCACATCATGGAGACTTG...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGCAGGGTTCATGCCCTaGAGGTGGAAAGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPAGFMP*RWKGKQ
Trigger: CTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCAGGGTTCATGCCCTaGAGGTGGAAAGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLAGFMP*RWKGKQ
Trigger: CTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGC...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTGCAGGGTTCATGCCCTaGAGGTGGAAAGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACAGFMP*RWKGKQ
Trigger: CTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGC...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGTCAAATTCTGCACATaGCATGTGACCATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWVKFCT*HVTILV
Trigger: CACGAGGATGGTCACATGCCATGTGCAGAATTTGAC...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGACTGGAGCCCACCATaGAGAGATGTGTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLDWSPP*RDVSLG
Trigger: CCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTC...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCAGTGGGGGTCCATTTTaGGTGTGGTTCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVASGGPF*VWFHLI
Trigger: AATCAGATGGAACCACACCCAAAATGGACCCCCACT...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACAGTGGGGGTCCATTTTaGGTGTGGTTCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDSGGPF*VWFHLI
Trigger: AATCAGATGGAACCACACCCAAAATGGACCCCCACT...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAGGGAGATATATGGTCTaGGAAGGTAGTGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQGRYMV*EGSGGP
Trigger: TGGACCCCCACTACCTTCCCAGACCATATATCTCCC...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCCCAAGGGAAGCTaGCCCTGTTGGACTATGATC +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLAPKGS*PCWTMI
Trigger: GATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGC...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCAGGTTTGGACTGGGTaGGAAGCTACTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKQVWTG*EATGIQ
Trigger: CTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCACCCCCTGGGTGGGCCTaGGGCAGCCCAAATCCTACA +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAPPGWA*GSPNPT
Trigger: TGTAGGATTTGGGCTGCCCCAGGCCCACCCAGGGGG...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACCCCCTGGGTGGGCCTaGGGCAGCCCAAATCCTACA +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIPPGWA*GSPNPT
Trigger: TGTAGGATTTGGGCTGCCCCAGGCCCACCCAGGGGG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATATCAGAGCCCCCTGGGTaGGCCTGGGGCAGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCISEPPG*AWGSPN
Trigger: ATTTGGGCTGCCCCAGGCCCACCCAGGGGGCTCTGA...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGTCAGGCAGAAGCTTGTaGTCAGAGGGGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQSGRSL*SEGTTS
Trigger: GCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGA...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCTCTTCCTGAAAAAGTaGTCACCAAGGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKLFLKK*SPRPEG
Trigger: CCCTTCTGGCCTTGGTGATCACTTTTTCAGGAAGAG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTGGAGCCCTGAGCGCTTaGAGTTGCCATCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPGALSA*SCHPSG
Trigger: GCCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCC...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTGTGCCTGAGGTTCCTTaGAGGTGGTATCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTVPEVP*RWYQDL
Trigger: GAGATCCTGATACCACCTTCAAGGAACCTCAGGCAC...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGGTGCCTGAGGTTCCTTaGAGGTGGTATCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLVPEVP*RWYQDL
Trigger: GAGATCCTGATACCACCTTCAAGGAACCTCAGGCAC...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTCTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTLTVGA*GSLKVV
Trigger: TACCACCTTCAAGGAACCTCAGGCACCAACAGTGAG...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCCTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIALTVGA*GSLKVV
Trigger: TACCACCTTCAAGGAACCTCAGGCACCAACAGTGAG...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATTCTGCACATGGCATGTaGCCATCCTCGTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDSAHGM*PSSWAH
Trigger: GTGAGCCCACGAGGATGGTCACATGCCATGTGCAGA...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAGGCCCTGTTGGACTATaGTCAAGGGGAGATATATGG +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQGPVGL*SRGDIW
Trigger: CCATATATCTCCCCTTGATCATAGTCCAACAGGGCC...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTCCACCAGCAAAGAACTaGCCCAGGTCTTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPPPAKN*PRSWTK
Trigger: CTTGGTCCAAGACCTGGGTCAGTTCTTTGCTGGTGG...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCATGATGGTGTTGACCTaGGGAATCTTCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTMMVLT*GIFRQK
Trigger: CTTCTGCCTGAAGATTCCTCAGGTCAACACCATCAT...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGCACGTAATTCTCCCTaGGCAGCTATGCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKARNSP*AAMPES
Trigger: TGACTCTGGCATAGCTGCTCAGGGAGAATTACGTGC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAAGGGTTACCAGCAGCTaGAGTTCACTTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQRVTSS*SSLLAL
Trigger: AAGGGCAAGAAGTGAACTGCAGCTGCTGGTAACCCT...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGGAGGGCAAGTTCAATaGTTGGCTGAGGCCATGAGA +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKGGQVQ*LAEAMR
Trigger: TCTCATGGCCTCAGCCAAGCATTGAACTTGCCCTCC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAAAACCTCTGCCCAGATaGATGTCACCCAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQKPLPR*MSPKKD
Trigger: GTCCTTCTTGGGTGACATGCATCTGGGCAGAGGTTT...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCACCAGGGTCCGTACCTaGGAGCAATGCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSTRVRT*EQCLRL
Trigger: AAGCCTCAAGCATTGCTCGCAGGTACGGACCCTGGT...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCTGCACTTCCATACCTaGGGGCCGACTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTLHFHT*GPTPGP
Trigger: TGGCCCAGGAGTCGGCCCGCAGGTATGGAAGTGCAG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCTTCTGGGCACAGAGCTaGTCATCCTCTCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAFWAQS*SSSLSW
Trigger: CCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAA...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCTTCTGGGCACAGAGCTaGTCATCCTCTCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSFWAQS*SSSLSW
Trigger: CCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAA...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCCCTTCCAGTGGGCATaGGCAGCAAAGCCTATGTGG +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGPFQWA*AAKPMW
Trigger: CCACATAGGCTTTGCTGCGCATGCCCACTGGAAGGG...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGATTCAGGTCCTCAAAGTaGACCACCAGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMRFRSSK*TTSTFL
Trigger: CAAGAAGGTGCTGGTGGTGCACTTTGAGGACCTGAA...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATAAGGGGCAGGGTTCATaGCCTGGAGGTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDKGQGS*PGGGKA
Trigger: TGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTT...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCTGGGCTCACTGTTGGTaGCTGAGGTTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAWAHCW*LRFLEG
Trigger: ACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCA...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAGGAATTGGGGAAGTGTaGCACAGGTCTAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMRGIGEV*HRSNPC
Trigger: ACAGGGATTAGACCTGTGGCACACTTCCCCAATTCC...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGCCTGGGTTTGGGCAGTaGAGAACACACAAGCGAACA +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRPGFGQ*RTHKRT
Trigger: TGTTCGCTTGTGTGTTCTCCACTGCCCAAACCCAGG...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATTGGGGGCCTTGTTTCTaGCCTCTTCCCCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDWGPCF*PLPQLK
Trigger: CTTCAGCTGGGGAAGAGGCCAGAAACAAGGCCCCCA...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGGCCATGAGAAAGGATaGAGCTTACCAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPGHEKG*SLPALP
Trigger: TGGGAGGGCTGGTAAGCTCCATCCTTTCTCATGGCC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATATGGCTCTCTGGGGCTTaGCTGGGGTGCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIWLSGA*LGCLGE
Trigger: CTCTCCCAAGCACCCCAGCCAAGCCCCAGAGAGCCA...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGAGCAGCCGATGTACTTaGCTCGCTCTTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLSSRCT*LALPPS
Trigger: AGAAGGAGGAAGAGCGAGCCAAGTACATCGGCTGCT...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGTCAGCACAGTTGTCCTaGCAACGGAAGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKSAQLS*QRKMVI
Trigger: GATGACCATCTTCCGTTGCCAGGACAACTGTGCTGA...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAGCGGGAATCGGGTGGTaGGAAACCCACAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAAGIGW*ETHSGR
Trigger: CCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGC...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGCCTCGATCTCTTTCTaGCCGCTTTCGTGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQASISF*PLSCVL
Trigger: CAAGACGCACGAAAGCGGCCAGAAAGAGATCGAGGC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGAAGTTGCCATCCTTCTaGCTCTCCACACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLKLPSF*LSTQSS
Trigger: GCTGCTCTGTGTGGAGAGCCAGAAGGATGGCAACTT...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGCAAGTCTCCATGATGTaGATGAGCCCTCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQQVSMM*MSPPSH
Trigger: GTGGGAGGGAGGGCTCATCCACATCATGGAGACTTG...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCTCTTGCTGTCTCACCTaGATAGCAAAGGACCCATTT +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVASCCLT*IAKDPF
Trigger: AAATGGGTCCTTTGCTATCCAGGTGAGACAGCAAGA...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCGGGTTGGGGAAGAGATaGGACTCTGGACCAACACTT +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAGLGKR*DSGPTL
Trigger: AAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCC...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCACTGGTATCCAGGGTTaGGGAAGAGATGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIATGIQG*GRDGTL
Trigger: CAGAGTCCCATCTCTTCCCCAACCCTGGATACCAGT...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTTGGATGGTGCAGGTTTaGACTGGGTGGGAAGCTACT +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTWMVQV*TGWEAT
Trigger: AGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCA...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCTGGATGGTGCAGGTTTaGACTGGGTGGGAAGCTACT +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSWMVQV*TGWEAT
Trigger: AGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCA...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCTACATAATGATGGATaGTGCAGGTTTGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDLHNDG*CRFGLG
Trigger: ACCCAGTCCAAACCTGCACCATCCATCATTATGTAG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCATCAGAGCCCCCTGGGTaGGCCTGGGGCAGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPSEPPG*AWGSPN
Trigger: ATTTGGGCTGCCCCAGGCCCACCCAGGGGGCTCTGA...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATGATTTGCAAAGATCCTaGTACGGCTCCTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYDLQRS*YGSFAL
Trigger: AAGGGCAAAGGAGCCGTACCAGGATCTTTGCAAATC...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCGTTCCTCACGAACTCTaGCCACTCTCCTACAGATGC +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAVPHEL*PLSYRC
Trigger: GCATCTGTAGGAGAGTGGCCAGAGTTCGTGAGGAAC...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACCTCCTGCCGGGCCCTaGGGCTATTTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIPPAGP*GYFSRS
Trigger: AGACCTGGAGAAATAGCCCCAGGGCCCGGCAGGAGG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACCTTGCTCGCTCCCCTaGACTTCACGTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIPCSLP*TSRLQP
Trigger: GGGCTGGAGACGTGAAGTCCAGGGGAGCGAGCAAGG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
3UTR CAA 72 bp TTTACAATAGCCCCCTGGGCTCTTGCATCAAGAGCCTaGACAATTGCCATGGGGCATCCAGCAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FTIAPWALASRA*TIAMGHPASLH
Trigger: ATGGAGACTTGCTGGATGCCCCATGGCAATTGTCAAGGCTCTTGATGCAAGAGCCCAGGGGGCTATTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTGGCCTCTTCCCCAGCTaGAGACCAAGCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPGLFPS*RPSLAF
Trigger: AAAGGCCAAGCTTGGTCTTCAGCTGGGGAAGAGGCC...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCAGTTCAATGCTTGGCTaGGGCCATGAGAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIASSMLG*GHEKGW
Trigger: CCATCCTTTCTCATGGCCTCAGCCAAGCATTGAACT...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACGCTTTCGTGCGTCTTaGTGCAGATGGTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIRFRAS*CRWSVR
Trigger: GCGGACGGACCATCTGCATCAAGACGCACGAAAGCG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGGAGCTTCCGGAGCCCTaGGCGCTTGAAGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTELPEP*ALEVAI
Trigger: GATGGCAACTTCAAGCGCTCAGGGCTCCGGAAGCTC...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGAACAGAAGGTGGCCTaGGTTAAACATCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPEQKVA*VKHRCQ
Trigger: CTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCCCAATTAACCTACTGTaGGCACCATTACCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAPINLL*APLPPH
Trigger: GTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGG...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGACAAGCAGCTCATTTCTaGGAAGCAGTGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGQAAHF*EAVWPG
Trigger: CCCAGGCCACACTGCTTCTCAGAAATGAGCTGCTTG...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGGCCCTGTTGGACTATaGTCAAGGGGAGATATATGG +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKGPVGL*SRGDIW
Trigger: CCATATATCTCCCCTTGATCATAGTCCAACAGGGCC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCAAGATTGATGCTCCGTaGTTTAGGTCCTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAKIDAP*FRSSEI
Trigger: GATTTCTGAGGACCTAAATCACGGAGCATCAATCTT...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAATTCTTGCCCTTTCTCTaGTCCTCAGGCCAATGGATC +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKFLPFL*SSGQWI
Trigger: GATCCATTGGCCTGAGGAGCAGAGAAAGGGCAAGAA...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGTTCTTGCCCTTTCTCTaGTCCTCAGGCCAATGGATC +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLFLPFL*SSGQWI
Trigger: GATCCATTGGCCTGAGGAGCAGAGAAAGGGCAAGAA...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAGGGGCTTGGCTGGGGTaGTTGGGAGAGGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPGAWLG*LGEDGR
Trigger: CCTTCCATCCTCTCCCAAGCACCCCAGCCAAGCCCC...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTACCAGGGTCCGTACCTaGGAGCAATGCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGTRVRT*EQCLRL
Trigger: AAGCCTCAAGCATTGCTCGCAGGTACGGACCCTGGT...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGGTACTCCTTCTCAGTaGAGAAGTCCACGCATTTGT +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAGTPSQ*RSPRIC
Trigger: ACAAATGCGTGGACTTCTGCACTGAGAAGGAGTACC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAGGTGCCTGCAAGAGCTaGCAGCGGGTACTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAGACKS*QRVLLL
Trigger: GAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACC...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTGCCAAAGCAATGAGCTaGTTGGACTTGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGAKAMS*LDLPGR
Trigger: CCTGCCAGGCAAGTCCAAGCAGCTCATTGCTTTGGC...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGCCGCCCTTTGAGGGCTaGATCCACCATCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQPPFEG*IHHLDV
Trigger: TACATCAAGATGGTGGATGCAGCCCTCAAAGGGCGG...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCCATAATGATGGATGGTaGAGGTTTGGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAHNDGW*RFGLGG
Trigger: CCCACCCAGTCCAAACCTGCACCATCCATCATTATG...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCTCTCCATGGTCTCTTTaGTACTTGGGAATGAGCATT +
Preference number: 4 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLSPWSL*YLGMSI
Trigger: AATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGA...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGGCCTTTCTACCTCATaGGAACAGAAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDGLSTS*EQKLVG
Trigger: GCCCACCAGCTTCTGTTCCCATGAGGTAGAAAGGCC...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGTGTGAGAATAGCACTTaGAGAAGGTTTCTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWCENST*RRFLRV
Trigger: AACCCTCAGAAACCTTCTCCAAGTGCTATTCTCACA...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAGGGATCATTCCGGACTaGCTCTCTGGGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAGIIPD*LSGAWL
Trigger: CAGCCAAGCCCCAGAGAGCCAGTCCGGAATGATCCC...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCGTAGTCGCCAAGCTTaGCTCTCTCATTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLRSRQA*LSHSHP
Trigger: AGGATGGGAATGAGAGAGCCAAGCTTGGCGACTACG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCCTGGCAACGGAAGATaGTCATCTTTTTGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDPGNGR*SSFCSQ
Trigger: TTGACTACAAAAAGATGACCATCTTCCGTTGCCAGG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCTGCTTGGACTTGCCTaGCAGGAACCTTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLLLGLA*QEPSVH
Trigger: ATGGACAGAAGGTTCCTGCCAGGCAAGTCCAAGCAG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGGCCTCGATCTCTTTCTaGCCGCTTTCGTGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRASISF*PLSCVL
Trigger: CAAGACGCACGAAAGCGGCCAGAAAGAGATCGAGGC...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATTCTTTGCCCTTCCAGTaGGCATGCGCAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDSLPFQ*ACAAKP
Trigger: AGGCTTTGCTGCGCATGCCCACTGGAAGGGCAAAGA...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTGTGGACGCATCATCTTaGGTAGTAGTCATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACVDASS*VVVIGD
Trigger: GTCCCCGATGACTACTACCCAAGATGATGCGTCCAC...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCCTCCCTCCCACAAATaGAACCCAGAGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTPPSHK*NPEWWG
Trigger: CCCCCACCACTCTGGGTTCCATTTGTGGGAGGGAGG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGTTTACAATAGCCCCCTaGGCTCTTGCATCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRFTIAP*ALASRA
Trigger: GGCTCTTGATGCAAGAGCCCAGGGGGCTATTGTAAA...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAACCAATGGCCCCACATaGTGTCTCCAATTAACCTAC +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMRTNGPT*CLQLTY
Trigger: GTAGGTTAATTGGAGACACCATGTGGGGCCATTGGT...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCTCGTGGGCTCACTGTTaGTGCCTGAGGTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSSWAHC*CLRFLE
Trigger: TTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGA...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAGTCAAATTCTGCACATaGCATGTGACCATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: GCEISAQKGQASGAKFLQVKFCT*HVTILV
Trigger: CACGAGGATGGTCACATGCCATGTGCAGAATTTGAC...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCAGGTCCATTTTGGGTGTaGTTCCATCTGATTAAGAAC +
Preference number: 4 (lower is better)
Translates to: VDLRNLQAEACGQRGPPAGPFWV*FHLIKN
Trigger: GTTCTTAATCAGATGGAACCACACCCAAAATGGACC...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGGGAGATATATGGTCTaGGAAGGTAGTGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQGRYMV*EGSGGP
Trigger: TGGACCCCCACTACCTTCCCAGACCATATATCTCCC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGGGTTGGGGAAGAGATaGGACTCTGGACCAACACTT +
Preference number: 4 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQGLGKR*DSGPTL
Trigger: AAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCAGGTTTGGACTGGGTaGGAAGCTACTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSQVWTG*EATGIQ
Trigger: CTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACAGTCTCACTCTTCCTaGAAAAGTGATCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKQSHSS*KSDHQG
Trigger: GCCTTGGTGATCACTTTTTCAGGAAGAGTGAGACTG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTAGCTGGCCAAAGCAATaGGCTGCTTGGACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPSWPKQ*AAWTCL
Trigger: CAGGCAAGTCCAAGCAGCTCATTGCTTTGGCCAGCT...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCCTTCTTGCCAAACTTaGGCCAGTCCAGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGPSCQT*ASPVCE
Trigger: CTCACACACTGGACTGGCTCAAGTTTGGCAAGAAGG...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGCTGCATCCACCATCTTaGTGTAGGCAGAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLLHPPS*CRQRWS
Trigger: AGACCATCTCTGCCTACATCAAGATGGTGGATGCAG...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCGGGTGTGGTTCCATCTaGTTAAGAACACTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSGCGSI*LRTLLL
Trigger: CAGCAAGAGTGTTCTTAATCAGATGGAACCACACCC...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTGGCCCTGTTGGACTATaGTCAAGGGGAGATATATGG +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACGPVGL*SRGDIW
Trigger: CCATATATCTCCCCTTGATCATAGTCCAACAGGGCC...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCTCAAGTTGTAGCTGTTaGAGAATAACCACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTSSCSC*RITTWV
Trigger: AACCCAGGTGGTTATTCTGCAACAGCTACAACTTGA...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR GCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAAACCTCTGCCCAGATaGATGTCACCCAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSKPLPR*MSPKKD
Trigger: GTCCTTCTTGGGTGACATGCATCTGGGCAGAGGTTT...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTTGTCCCGGAAACCTCTaGCCAGATGCATGTCACCCA +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPCPGNL*PDACHP
Trigger: TGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACA...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGGGTACTCCTTCTCAGTaGAGAAGTCCACGCATTTGT +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRGTPSQ*RSPRIC
Trigger: ACAAATGCGTGGACTTCTGCACTGAGAAGGAGTACC...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTTGGACAAAGAGGTCCTaGTTCAGGTCCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPWTKRS*FRSSKC
Trigger: GCACTTTGAGGACCTGAAGCAGGACCTCTTTGTCCA...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGTGGACAAAGAGGTCCTaGTTCAGGTCCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLWTKRS*FRSSKC
Trigger: GCACTTTGAGGACCTGAAGCAGGACCTCTTTGTCCA...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTCATAATGATGGATGGTaGAGGTTTGGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACHNDGW*RFGLGG
Trigger: CCCACCCAGTCCAAACCTGCACCATCCATCATTATG...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAATCAGGACTCAGGGATaGCACCTGAAGGGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIIRTQG*HLKGLR
Trigger: GCGGAGACCCTTCAGGTGGCATCCCTGAGTCCTGAT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGCTGAAGACCAAGCTTaGCCTTTCTACCTCATGGGA +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPAEDQA*PFYLMG
Trigger: TCCCATGAGGTAGAAAGGCCAAGCTTGGTCTTCAGC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGAAGGTGAGCTTCTTTaGGCCAACAAGGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLEGELL*ANKGVL
Trigger: CAAAACCCCCTTGTTGGCCCAAAGAAGCTCACCTTC...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGAGGATGGAAGGGGCTTaGTTTCCCAAGCTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRRMEGA*FPKLSL
Trigger: TAAGGAAAGCTTGGGAAACCAAGCCCCTTCCATCCT...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGACAGACATGTTCAGCATaGCAGCTGTCACGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGQTCSA*QLSRVR
Trigger: CCTTACCCGTGACAGCTGCCATGCTGAACATGTCTG...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGACCATCCGGCCCAGCTaGACAAAGAGGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTTIRPS*TKRSCF
Trigger: GAAGCAGGACCTCTTTGTCCAGCTGGGCCGGATGGT...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTGTGGACGCATCATCTTaGGTAGTAGTCATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGVDASS*VVVIGD
Trigger: GTCCCCGATGACTACTACCCAAGATGATGCGTCCAC...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAAATGGAACCCAGAGTaGTGGGGGCAGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPKWNPE*WGQGPR
Trigger: CCTGGGTCCCTGCCCCCACCACTCTGGGTTCCATTT...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCTTTACAATAGCCCCCTaGGCTCTTGCATCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSFTIAP*ALASRA
Trigger: GGCTCTTGATGCAAGAGCCCAGGGGGCTATTGTAAA...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTCAGTGTAAGACTGACTaGAGCCCACCATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPQCKTD*SPPWRD
Trigger: ATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTG...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTAGTTCAATGCTTGGCTaGGGCCATGAGAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGSSMLG*GHEKGW
Trigger: CCATCCTTTCTCATGGCCTCAGCCAAGCATTGAACT...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGGGAGCCCTGAGCGCTTaGAGTTGCCATCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGGALSA*SCHPSG
Trigger: GCCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCC...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACAAAGAGAGGACAGATaGGTGGGGGTAACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIQREDR*VGVTRG
Trigger: ACCCCTGGTTACCCCCACTCATCTGTCCTCTCTTTG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGACCAATTAACCTACTGTaGGCACCATTACCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGPINLL*APLPPH
Trigger: GTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGG...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCATGATGGTGTTGACCTaGGGAATCTTCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSMMVLT*GIFRQK
Trigger: CTTCTGCCTGAAGATTCCTCAGGTCAACACCATCAT...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTCGTACCTGCGAGCAATaGTTGAGGCTTCACCTGTGT +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPRTCEQ*LRLHLC
Trigger: ACACAGGTGAAGCCTCAAGCATTGCTCGCAGGTACG...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGTGCCTCGCTCGCCCTTaGACTCCATGTCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGCLARP*TPCRTL
Trigger: CAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCA...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGGTACTCCTTCTCAGTaGAGAAGTCCACGCATTTGT +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLGTPSQ*RSPRIC
Trigger: ACAAATGCGTGGACTTCTGCACTGAGAAGGAGTACC...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGGGTGCCTGCAAGAGCTaGCAGCGGGTACTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGGACKS*QRVLLL
Trigger: GAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACC...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCATAATGATGGATGGTaGAGGTTTGGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGHNDGW*RFGLGG
Trigger: CCCACCCAGTCCAAACCTGCACCATCCATCATTATG...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTGGAATTGGGGAAGTGTaGCACAGGTCTAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGGIGEV*HRSNPC
Trigger: ACAGGGATTAGACCTGTGGCACACTTCCCCAATTCC...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGGGAATTGGGGAAGTGTaGCACAGGTCTAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRGIGEV*HRSNPC
Trigger: ACAGGGATTAGACCTGTGGCACACTTCCCCAATTCC...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp ATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCGAGCGAAATAAGATTTaGAAAGATCCTGGTACGGCT +
Preference number: 4 (lower is better)
Translates to: MTQFHSPHSLKGPQGKLAERNKI*KDPGTA
Trigger: AGCCGTACCAGGATCTTTGCAAATCTTATTTCGCTC...GGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR GCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGTCTCCGCCACTTaGAAACTCTGCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPRVSAT*KLCQLS
Trigger: GCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCT...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGGCTGAAGACCAAGCTTaGCCTTTCTACCTCATGGGA +
Preference number: 4 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRAEDQA*PFYLMG
Trigger: TCCCATGAGGTAGAAAGGCCAAGCTTGGTCTTCAGC...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGTCTGGGTTATTTCACTaGGGGCCTTGTTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRSGLFH*GPCFWP
Trigger: AGGCCAGAAACAAGGCCCCCAGTGAAATAACCCAGA...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTTGCTCCTCAGGCCAATaGATCTGGGTTATTTCACTG +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPCSSGQ*IWVISL
Trigger: CAGTGAAATAACCCAGATCCATTGGCCTGAGGAGCA...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAGGCCATGAGAAAGGATaGAGCTTACCAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAGHEKG*SLPALP
Trigger: TGGGAGGGCTGGTAAGCTCCATCCTTTCTCATGGCC...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGGTGGGAAACCCACAGTaGCAGGCGGTGCCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGVGNPQ*QAVPAR
Trigger: TCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCAC...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTAGCGGGAATCGGGTGGTaGGAAACCCACAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGIQFQNIERQENTKAILAGIGW*ETHSGR
Trigger: CCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGC...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCATCATCCTCTCTGTCATaGAGCGGGAATCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKASSSLS*SGNRVV
Trigger: CACCACCCGATTCCCGCTCCATGACAGAGAGGATGA...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTATGCAACGGTTGTCTTaGACTTGTGTCTGGTACACA +
Preference number: 4 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTMQRLS*TCVWYT
Trigger: TGTGTACCAGACACAAGTCCAAGACAACCGTTGCAT...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTCTGCTTGGACTTGCCTaGCAGGAACCTTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPLLGLA*QEPSVH
Trigger: ATGGACAGAAGGTTCCTGCCAGGCAAGTCCAAGCAG...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCGTGTTGCCAGCACCTaGGAAGCTGGCCAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTRVAST*EAGQSN
Trigger: ATTGCTTTGGCCAGCTTCCCAGGTGCTGGCAACACG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACGTGTTGCCAGCACCTaGGAAGCTGGCCAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIRVAST*EAGQSN
Trigger: ATTGCTTTGGCCAGCTTCCCAGGTGCTGGCAACACG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCAAGTCTCCATGATGTaGATGAGCCCTCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTQVSMM*MSPPSH
Trigger: GTGGGAGGGAGGGCTCATCCACATCATGGAGACTTG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGAGAAGGGACAAGCATCTaGGGCCAAGTTTTTACAATA +
Preference number: 4 (lower is better)
Translates to: RRWPELNIGASTSWVEMREGTSI*GQVFTI
Trigger: TATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTC...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGAAGGGACAAGCATCTaGGGCCAAGTTTTTACAATA +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKEGTSI*GQVFTI
Trigger: TATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTC...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGTCTTGCTGTCTCACCTaGATAGCAAAGGACCCATTT +
Preference number: 4 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLSCCLT*IAKDPF
Trigger: AAATGGGTCCTTTGCTATCCAGGTGAGACAGCAAGA...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCCTTCTTGCCAAACTTaGGCCAGTCCAGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTPSCQT*ASPVCE
Trigger: CTCACACACTGGACTGGCTCAAGTTTGGCAAGAAGG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACTCACTGTTGGTGCCTaGGGTTCCTTGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCILTVGA*GSLKVV
Trigger: TACCACCTTCAAGGAACCTCAGGCACCAACAGTGAG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATGGGTGTGGTTCCATCTaGTTAAGAACACTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDGCGSI*LRTLLL
Trigger: CAGCAAGAGTGTTCTTAATCAGATGGAACCACACCC...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCCCTCCACTGCTTCATaGAAGAAGACTAAAAATTCT +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKPSTAS*KKTKNS
Trigger: AGAATTTTTAGTCTTCTTTCATGAAGCAGTGGAGGG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAGCACGTAATTCTCCCTaGGCAGCTATGCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIARNSP*AAMPES
Trigger: TGACTCTGGCATAGCTGCTCAGGGAGAATTACGTGC...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCACGTACCTGCGAGCAATaGTTGAGGCTTCACCTGTGT +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKARTCEQ*LRLHLC
Trigger: ACACAGGTGAAGCCTCAAGCATTGCTCGCAGGTACG...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCAAACTCCTCCGCGCTaGACTTCTGGGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGQTPPR*TSGHRA
Trigger: AGCTCTGTGCCCAGAAGTGCAGCGCGGAGGAGTTTG...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCTCTCCATGGTCTCTTTaGTACTTGGGAATGAGCATT +
Preference number: 4 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIASPWSL*YLGMSI
Trigger: AATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGA...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGCCTCCTTTACACGGGTaGAATTCCATACACAAGGAC +
Preference number: 4 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRPPLHG*NSIHKD
Trigger: GTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGG...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTGAAAGTGGGATAGTGTaGGCCTTGAATTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPESGIV*ALNCSS
Trigger: GCTGCTGCAATTCAAGGCGCACACTATCCCACTTTC...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTATCAGGCCAATGGATCTaGGTTATTTCACTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTLGKHPICEPVLSGQWI*VISLGA
Trigger: GGCCCCCAGTGAAATAACCCAGATCCATTGGCCTGA...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGTGTGAGAATAGCACTTaGAGAAGGTTTCTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRCENST*RRFLRV
Trigger: AACCCTCAGAAACCTTCTCCAAGTGCTATTCTCACA...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGAGCAGCCGATGTACTTaGCTCGCTCTTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTSSRCT*LALPPS
Trigger: AGAAGGAGGAAGAGCGAGCCAAGTACATCGGCTGCT...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACCTGGCAACGGAAGATaGTCATCTTTTTGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKPGNGR*SSFCSQ
Trigger: TTGACTACAAAAAGATGACCATCTTCCGTTGCCAGG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCATGCAACGGTTGTCTTaGACTTGTGTCTGGTACACA +
Preference number: 4 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSMQRLS*TCVWYT
Trigger: TGTGTACCAGACACAAGTCCAAGACAACCGTTGCAT...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGGCAGCAAAGCCTATGTaGCCGCCGTACTTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGAAKPM*PPYLRL
Trigger: CAACCGCAAGTACGGCGGCCACATAGGCTTTGCTGC...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCATCTTTGCCCTTCCAGTaGGCATGCGCAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPSLPFQ*ACAAKP
Trigger: AGGCTTTGCTGCGCATGCCCACTGGAAGGGCAAAGA...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCACAGAGTGGTAGTGCCTaGGCAATCTCTTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKAQSGSA*AISSLE
Trigger: CTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTG...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACAGAGTGGTAGTGCCTaGGCAATCTCTTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIQSGSA*AISSLE
Trigger: CTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCGGTCCATTTTGGGTGTaGTTCCATCTGATTAAGAAC +
Preference number: 4 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSGPFWV*FHLIKN
Trigger: GTTCTTAATCAGATGGAACCACACCCAAAATGGACC...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAGGAAGCTGGCCCTGTTaGACTATGATCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIGSWPC*TMIKGR
Trigger: TCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCC...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTAACTGGTATCCAGGGTTaGGGAAGAGATGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTLGKHPICEPVLTGIQG*GRDGTL
Trigger: CAGAGTCCCATCTCTTCCCCAACCCTGGATACCAGT...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTATGGATGGTGCAGGTTTaGACTGGGTGGGAAGCTACT +
Preference number: 4 (lower is better)
Translates to: THTHTHTLGKHPICEPVLWMVQV*TGWEAT
Trigger: AGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCA...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CAA 72 bp TCTTTACACGCACCTTCTCCATGGTCTCTTTGCTACTaGGGAATGAGCATTTACCTGCACTCCAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SLHAPSPWSLCY*GMSIYLHSKAS
Trigger: TGAAGCCTTGGAGTGCAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACTGCAGTTCACTTCTTaGCCTTTCTCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCILQFTS*PFSAPQ
Trigger: CTGAGGAGCAGAGAAAGGGCAAGAAGTGAACTGCAG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAAGGGTTACCAGCAGCTaGAGTTCACTTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIRVTSS*SSLLAL
Trigger: AAGGGCAAGAAGTGAACTGCAGCTGCTGGTAACCCT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAAAACCTCTGCCCAGATaGATGTCACCCAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIKPLPR*MSPKKD
Trigger: GTCCTTCTTGGGTGACATGCATCTGGGCAGAGGTTT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATATGGACAAAGAGGTCCTaGTTCAGGTCCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIWTKRS*FRSSKC
Trigger: GCACTTTGAGGACCTGAAGCAGGACCTCTTTGTCCA...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGCCCCCTGGGCTCTTaGATCAAGAGCCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPSPLGS*IKSLDN
Trigger: ATTGTCAAGGCTCTTGATGCAAGAGCCCAGGGGGCT...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCGCCTTCCCAGCTGCTaGAGTGGCTTTAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGRLPSC*SGFKER
Trigger: CCTTTCCTTAAAGCCACTGCAGCAGCTGGGAAGGCG...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR GCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTAGGGCGCCTTCCCAGCTaGTGCAGTGGCTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: CGIQFQNIERQENTKAILGRLPS*CSGFKE
Trigger: TTCCTTAAAGCCACTGCAGCAGCTGGGAAGGCGCCC...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATAGAACACACATAAGTTaGTCCCATTTTCCTACATAT +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYRTHIS*SHFPTY
Trigger: ATATGTAGGAAAATGGGACCAACTTATGTGTGTTCT...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAGAAGGTGAGCTTCTTTaGGCCAACAAGGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIEGELL*ANKGVL
Trigger: CAAAACCCCCTTGTTGGCCCAAAGAAGCTCACCTTC...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGTCATCCTCTCTGTCATaGAGCGGGAATCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGSSSLS*SGNRVV
Trigger: CACCACCCGATTCCCGCTCCATGACAGAGAGGATGA...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTAAGTCCAGTGTGTGAGTaGCCCACCACGGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: CGIQFQNIERQENTKAILSPVCE*PTTGHS
Trigger: ACTATGCCCCGTGGTGGGCCACTCACACACTGGACT...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGAAGGGACAAGCATCTaGGGCCAAGTTTTTACAATA +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPEGTSI*GQVFTI
Trigger: TATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTTCTTGCTGTCTCACCTaGATAGCAAAGGACCCATTT +
Preference number: 4 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGSCCLT*IAKDPF
Trigger: AAATGGGTCCTTTGCTATCCAGGTGAGACAGCAAGA...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTGGTCCATTTTGGGTGTaGTTCCATCTGATTAAGAAC +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPGPFWV*FHLIKN
Trigger: GTTCTTAATCAGATGGAACCACACCCAAAATGGACC...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATAGAGGCTATGACCTATaGCTTTTTCATCTACATAAT +
Preference number: 4 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYRGYDL*LFHLHN
Trigger: ATTATGTAGATGAAAAAGCCATAGGTCATAGCCTCT...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGTCATTACAAATAAGATaGTCATACCGGCAACTTGTG +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKSLQIR*SYRQLV
Trigger: CACAAGTTGCCGGTATGACCATCTTATTTGTAATGA...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
3UTR CAA 72 bp GGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATaGATGCTCCGTGATTTAGGTCCTCAGAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: GRDGTLDQHFVR*MLRDLGPQKSF
Trigger: GAAGGATTTCTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCACCAATTAACCTACTGTaGGCACCATTACCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPPINLL*APLPPH
Trigger: GTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGG...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGGTGCCTGAGGTTCCTTaGAGGTGGTATCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGVPEVP*RWYQDL
Trigger: GAGATCCTGATACCACCTTCAAGGAACCTCAGGCAC...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGATAGCAAAGAGGCTATaGCCTATGGCTTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLIAKRL*PMAFSS
Trigger: AGATGAAAAAGCCATAGGTCATAGCCTCTTTGCTAT...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCATTCAGGTCCTCAAAGTaGACCACCAGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPFRSSK*TTSTFL
Trigger: CAAGAAGGTGCTGGTGGTGCACTTTGAGGACCTGAA...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR GCA 90 bp GGAGAGATGTGTCACTGGGGCTCTCTCTTAAGTCAAATTCTGCACATGGCATGTCCATACACAAGGACCTaGACAGACTCATTACAAATA +
Preference number: 4 (lower is better)
Translates to: GEMCHWGSLLSQILHMACPYTRT*TDSLQI
Trigger: TATTTGTAATGAGTCTGTGCAGGTCCTTGTGTATGG...ACATGCCATGTGCAGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCCTCCTTTACACGGGTaGAATTCCATACACAAGGAC +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTPPLHG*NSIHKD
Trigger: GTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGTGCTCCTCAGGCCAATaGATCTGGGTTATTTCACTG +
Preference number: 4 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTCSSGQ*IWVISL
Trigger: CAGTGAAATAACCCAGATCCATTGGCCTGAGGAGCA...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAACCAATGGCCCCACATaGTGTCTCCAATTAACCTAC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCITNGPT*CLQLTY
Trigger: GTAGGTTAATTGGAGACACCATGTGGGGCCATTGGT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAGTCAAATTCTGCACATaGCATGTGACCATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIVKFCT*HVTILV
Trigger: CACGAGGATGGTCACATGCCATGTGCAGAATTTGAC...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTAAGTGGGGGTCCATTTTaGGTGTGGTTCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: THTHTHTLGKHPICEPVLSGGPF*VWFHLI
Trigger: AATCAGATGGAACCACACCCAAAATGGACCCCCACT...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTCTACATAATGATGGATaGTGCAGGTTTGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPLHNDG*CRFGLG
Trigger: ACCCAGTCCAAACCTGCACCATCCATCATTATGTAG...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGAGAGGCTATGACCTATaGCTTTTTCATCTACATAAT +
Preference number: 4 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKRGYDL*LFHLHN
Trigger: ATTATGTAGATGAAAAAGCCATAGGTCATAGCCTCT...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCACAGTCTCACTCTTCCTaGAAAAGTGATCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPQSHSS*KSDHQG
Trigger: GCCTTGGTGATCACTTTTTCAGGAAGAGTGAGACTG...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGATAGCAAAGAGGCTATaGCCTATGGCTTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRIAKRL*PMAFSS
Trigger: AGATGAAAAAGCCATAGGTCATAGCCTCTTTGCTAT...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGACCCTCCACTGCTTCATaGAAGAAGACTAAAAATTCT +
Preference number: 4 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGPSTAS*KKTKNS
Trigger: AGAATTTTTAGTCTTCTTTCATGAAGCAGTGGAGGG...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGATCAGGACTCAGGGATaGCACCTGAAGCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGIRTQG*HLKQSL
Trigger: AAGGGATTGCTTCAGGTGGCATCCCTGAGTCCTGAT...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR CCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGATGGAAGGGGCTTaGTTTCCCAAGCTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPRMEGA*FPKLSL
Trigger: TAAGGAAAGCTTGGGAAACCAAGCCCCTTCCATCCT...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCAGTGTAAGACTGACTaGAGCCCACCATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGQCKTD*SPPWRD
Trigger: ATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTG...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCACTACATAATGATGGATaGTGCAGGTTTGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKALHNDG*CRFGLG
Trigger: ACCCAGTCCAAACCTGCACCATCCATCATTATGTAG...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGAGAGGCTATGACCTATaGCTTTTTCATCTACATAAT +
Preference number: 4 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRRGYDL*LFHLHN
Trigger: ATTATGTAGATGAAAAAGCCATAGGTCATAGCCTCT...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CCA 90 bp TGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACCTTCATTACAAATAAGATaGTCATACCGGCAACTTGTG +
Preference number: 4 (lower is better)
Translates to: CTLTISSFTRVQFHTQGPSLQIR*SYRQLV
Trigger: CACAAGTTGCCGGTATGACCATCTTATTTGTAATGA...AGGTCCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACTATTTCTCCAGGTCTaGCTCAAGGGGCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: CGIQFQNIERQENTKAILLFLQV*LKGHPL
Trigger: CAGAGGATGCCCCTTGAGCCAGACCTGGAGAAATAG...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547525.6
3UTR CAA 72 bp ATATATCTCTTTACACGCACCTTCTCCATGGTCTCTTaGCTACTTGGGAATGAGCATTTACCTGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: IYLFTRTFSMVS*LLGNEHLPALQ
Trigger: TTGGAGTGCAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGAGATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACTCTTCCTGAAAAAGTaGTCACCAAGGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: CGIQFQNIERQENTKAILLFLKK*SPRPEG
Trigger: CCCTTCTGGCCTTGGTGATCACTTTTTCAGGAAGAG...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAAAGATTGATGCTCCGTaGTTTAGGTCCTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIKIDAP*FRSSEI
Trigger: GATTTCTGAGGACCTAAATCACGGAGCATCAATCTT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAAGATTGATGCTCCGTaGTTTAGGTCCTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPKIDAP*FRSSEI
Trigger: GATTTCTGAGGACCTAAATCACGGAGCATCAATCTT...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATAATAGCAAAGAGGCTATaGCCTATGGCTTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIIAKRL*PMAFSS
Trigger: AGATGAAAAAGCCATAGGTCATAGCCTCTTTGCTAT...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACCCTCCACTGCTTCATaGAAGAAGACTAAAAATTCT +
Preference number: 4 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIPSTAS*KKTKNS
Trigger: AGAATTTTTAGTCTTCTTTCATGAAGCAGTGGAGGG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR TCA 90 bp TGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTAATGATGGTGTTGACCTaGGGAATCTTCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CGIQFQNIERQENTKAILMMVLT*GIFRQK
Trigger: CTTCTGCCTGAAGATTCCTCAGGTCAACACCATCAT...TAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTACCATACACAAGGACCTaGACAGACTCATTACAAATA +
Preference number: 4 (lower is better)
Translates to: THTHTHTLGKHPICEPVLPYTRT*TDSLQI
Trigger: TATTTGTAATGAGTCTGTGCAGGTCCTTGTGTATGG...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR TCA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCATTTAGAAAGTCCACTTaGGTTGTGTTTTGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPFRKST*VVFWSY
Trigger: GTAAGACCAAAACACAACTCAAGTGGACTTTCTAAA...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR CCA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAAGAACACACATAAGTTaGTCCCATTTTCCTACATAT +
Preference number: 4 (lower is better)
Translates to: ATCGIQFQNIERQENTKARTHIS*SHFPTY
Trigger: ATATGTAGGAAAATGGGACCAACTTATGTGTGTTCT...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS TCA 90 bp CAGGGAGGCGGGCGGAAGCGAGAGGAAGTGAAAGCCGGGCTCCTGTaGGCCTGGCGCTCGGGCGGGCGGCACTGCGGGTGCCCCGAGCCG +
Preference number: 5 (lower is better)
Translates to: QGGGRKREEVKAGLL*AWRSGGRHCGCPEP
Trigger: CGGCTCGGGGCACCCGCAGTGCCGCCCGCCCGAGCGCCAGGCTCACAGGAGCCCGGCTTTCACTTCCTCTCGCTTCCGCCCGCCTCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS GCA 90 bp GGCTGCGGCTCGGCGCGGAGCTCCGGCCGCCTGGCTCTCTCTCGCTaGCTCGCCGCTGCCTCCTTGGCTGCCTTGCTCGCTCCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: GCGSARSSGRLALSR*LAAASLAALLAPLD
Trigger: GTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAGGCGGCCGGAGCTCCGCGCCGAGCCGCAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS TCA 90 bp GACGCCAGCCGGCGAGCCAGGGAGGCGGGCGGAAGCGAGAGGAAGTaGAAGCCGGGCTCCTGTGAGCCTGGCGCTCGGGCGGGCGGCACT +
Preference number: 5 (lower is better)
Translates to: DASRRAREAGGSERK*KPGSCEPGARAGGT
Trigger: AGTGCCGCCCGCCCGAGCGCCAGGCTCACAGGAGCCCGGCTTTCACTTCCTCTCGCTTCCGCCCGCCTCCCTGGCTCGCCGGCTGGCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CCA 90 bp TCAGCAGGCGCCCGGGGTCCCTCTCTGCGACTCCCGCGTCCCGCTTaGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTGCTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SAGARGPSLRLPRPA*RARSVGAFPAAAVA
Trigger: AGCCACTGCAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGCGGGAGTCGCAGAGAGGGACCCCGGGCGCCTGCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS GCA 90 bp GGCGCGGAGCTCCGGCCGCCTGGCTCTCTCTCGCTGCCTCGCCGCTaGCTCCTTGGCTGCCTTGCTCGCTCCCCTGGACTTCACGTCTCC +
Preference number: 5 (lower is better)
Translates to: GAELRPPGSLSLPRR*LLGCLARSPGLHVS
Trigger: GGAGACGTGAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAGGCGGCCGGAGCTCCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CCA 90 bp GGGCCGACTCCTGGGCCAGCTGCAGCCGGTAGACAGAGAGGCGGTTaGCGCCGCCGCACACGCTGCCTCGCTCGCCCTTGCACTCCATGT +
Preference number: 5 (lower is better)
Translates to: GPTPGPAAAGRQRGG*RRRTRCLARPCTPC
Trigger: ACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGTCTACCGGCTGCAGCTGGCCCAGGAGTCGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS GCA 90 bp CAGAGAGGCGGTTGGCGCCGCCGCACACGCTGCCTCGCTCGCCCTTaGACTCCATGTCGCACTCTGCCTCGCTCACGTTCGTCGCCTGGA +
Preference number: 5 (lower is better)
Translates to: QRGGWRRRTRCLARP*TPCRTLPRSRSSPG
Trigger: TCCAGGCGACGAACGTGAGCGAGGCAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS GCA 90 bp GCTGCAGCCGGTAGACAGAGAGGCGGTTGGCGCCGCCGCACACGCTaGCTCGCTCGCCCTTGCACTCCATGTCGCACTCTGCCTCGCTCA +
Preference number: 5 (lower is better)
Translates to: AAAGRQRGGWRRRTR*LARPCTPCRTLPRS
Trigger: TGAGCGAGGCAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGTCTACCGGCTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS TCA 90 bp GGGATGCCACCTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGACTCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: GMPPEGSPPLANSAS*AQQAPGVPLCDSRV
Trigger: GACGCGGGAGTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGGTGGCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS TCA 90 bp GAGGCGGAACCTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGACTCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: EAEPEGSPPLANSAS*AQQAPGVPLCDSRV
Trigger: GACGCGGGAGTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGGTTCCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS GCA 90 bp GCCGCACACGCTGCCTCGCTCGCCCTTGCACTCCATGTCGCACTCTaGCTCGCTCACGTTCGTCGCCTGGATCTTGTGGCCGCAGTAGCA +
Preference number: 5 (lower is better)
Translates to: AAHAASLALALHVAL*LAHVRRLDLVAAVA
Trigger: TGCTACTGCGGCCACAAGATCCAGGCGACGAACGTGAGCGAGGCAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS GCA 90 bp GCATGGCAGCTGTCACGGGTAAGGCCAGGGAAAGGTTGTCGGGCCTaGGGAAGCAGCCCCGGAACACTGCACTTCCATACCTGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: AWQLSRVRPGKGCRA*GSSPGTLHFHTCGP
Trigger: CGGCCCGCAGGTATGGAAGTGCAGTGTTCCGGGGCTGCTTCCGCAGGCCCGACAACCTTTCCCTGGCCTTACCCGTGACAGCTGCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS GCA 90 bp CTCAAGGGGCATCCTCTGCGCCTCCAGCGGGAAAGTGGGATAGTGTaGGCCTTGAATTGCAGCAGCGGCGACAGCGGTGGCCGGGGACGA +
Preference number: 5 (lower is better)
Translates to: LKGHPLRLQRESGIV*ALNCSSGDSGGRGR
Trigger: TCGTCCCCGGCCACCGCTGTCGCCGCTGCTGCAATTCAAGGCGCACACTATCCCACTTTCCCGCTGGAGGCGCAGAGGATGCCCCTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000552195.5
CDS GCA 90 bp GCGTCCCGCTTGGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTGCTaGAGTGGCTTTAAGGAAAGGGGAGCCTGGATTTCCTTTCTCGCC +
Preference number: 5 (lower is better)
Translates to: ASRLARPLCGRLPSC*SGFKERGAWISFLA
Trigger: GGCGAGAAAGGAAATCCAGGCTCCCCTTTCCTTAAAGCCACTGCAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS GCA 90 bp CCCGCGTCCCGCTTGGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTaGTGCAGTGGCTTTAAGGAAAGGGGAGCCTGGATTTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: PASRLARPLCGRLPS*CSGFKERGAWISFL
Trigger: GAGAAAGGAAATCCAGGCTCCCCTTTCCTTAAAGCCACTGCAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS TCA 90 bp AAGCGAACATCTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGACTCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: KRTSEGSPPLANSAS*AQQAPGVPLCDSRV
Trigger: GACGCGGGAGTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGATGTTCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550529.5
CDS TCA 90 bp ATGTACTTGGCTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGACTCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: MYLAEGSPPLANSAS*AQQAPGVPLCDSRV
Trigger: GACGCGGGAGTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGCCAAGTACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551638.5
CDS CCA 90 bp CCAGGTCTGGCTCAAGGGGCATCCTCTGCGCCTCCAGCGGGAAAGTaGGATAGTGTGCGCCTTGAATTGCAGCAGCGGCGACAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: PGLAQGASSAPPAGK*DSVRLELQQRRQRW
Trigger: CCACCGCTGTCGCCGCTGCTGCAATTCAAGGCGCACACTATCCCACTTTCCCGCTGGAGGCGCAGAGGATGCCCCTTGAGCCAGACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000552195.5
CDS CCA 90 bp CACCAAGGCTCCTCCTGCCGGGCCCTGGGGCTATTTCTCCAGGTCTaGCTCAAGGGGCATCCTCTGCGCCTCCAGCGGGAAAGTGGGATA +
Preference number: 5 (lower is better)
Translates to: HQGSSCRALGLFLQV*LKGHPLRLQRESGI
Trigger: TATCCCACTTTCCCGCTGGAGGCGCAGAGGATGCCCCTTGAGCCAGACCTGGAGAAATAGCCCCAGGGCCCGGCAGGAGGAGCCTTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS TCA 90 bp TGTACTTGGCTCGCTCTTCCTCCTTCTCCCGGACAACCCTCCCCTTaGGGGCTCGGCTCCAGGCTCCACCGTAGTCGCCAAGCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: CTWLALPPSPGQPSP*GLGSRLHRSRQAWL
Trigger: GAGCCAAGCTTGGCGACTACGGTGGAGCCTGGAGCCGAGCCCTCAAGGGGAGGGTTGTCCGGGAGAAGGAGGAAGAGCGAGCCAAGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp GAGCGGGAATCGGGTGGTGGGAAACCCACAGTGGCAGGCGGTGCCTaGAAGAGCTGCCAGCGGGTACTCCTTCTCAGTGCAGAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: ERESGGGKPTVAGGA*KSCQRVLLLSAEVH
Trigger: GTGGACTTCTGCACTGAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 90 bp CACAGAGCTGCTCATCCTCTCTGTCATGGAGCGGGAATCGGGTGGTaGGAAACCCACAGTGGCAGGCGGTGCCTGCAAGAGCTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: HRAAHPLCHGAGIGW*ETHSGRRCLQELPA
Trigger: CGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATGACAGAGAGGATGAGCAGCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS CCA 90 bp GGGCACAGAGCTGCTCATCCTCTCTGTCATGGAGCGGGAATCGGGTaGTGGGAAACCCACAGTGGCAGGCGGTGCCTGCAAGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GHRAAHPLCHGAGIG*WETHSGRRCLQELP
Trigger: TGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATGACAGAGAGGATGAGCAGCTCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS CCA 90 bp TCCGCGCTGCACTTCTGGGCACAGAGCTGCTCATCCTCTCTGTCATaGAGCGGGAATCGGGTGGTGGGAAACCCACAGTGGCAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: SALHFWAQSCSSSLS*SGNRVVGNPQWQAV
Trigger: CACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAAGTGCAGCGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp CATGGAGCGGGAATCGGGTGGTGGGAAACCCACAGTGGCAGGCGGTaGCTGCAAGAGCTGCCAGCGGGTACTCCTTCTCAGTGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: HGAGIGWWETHSGRR*LQELPAGTPSQCRS
Trigger: ACTTCTGCACTGAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 90 bp TCCTCTCTGTCATGGAGCGGGAATCGGGTGGTGGGAAACCCACAGTaGCAGGCGGTGCCTGCAAGAGCTGCCAGCGGGTACTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SSLSWSGNRVVGNPQ*QAVPARAASGYSFS
Trigger: TGAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATGACAGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp CCGCAGCTCTCAAACTCCTCCGCGCTGCACTTCTGGGCACAGAGCTaGTCATCCTCTCTGTCATGGAGCGGGAATCGGGTGGTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PQLSNSSALHFWAQS*SSSLSWSGNRVVGN
Trigger: GTTTCCCACCACCCGATTCCCGCTCCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAAGTGCAGCGCGGAGGAGTTTGAGAGCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCGGACAACCCTCCCCTaGAGGGCTCGGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLRTTLP*RARLQA
Trigger: AGCCTGGAGCCGAGCCCTCAAGGGGAGGGTTGTCCG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCGGACAACCCTCCCCTaGAGGGCTCGGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDRTTLP*RARLQA
Trigger: AGCCTGGAGCCGAGCCCTCAAGGGGAGGGTTGTCCG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp ACGCCCAGCAGGCTGACCATCCGGCCCAGCTGGACAAAGAGGTCCTaGTTCAGGTCCTCAAAGTGCACCACCAGCACCTTCTTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: TPSRLTIRPSWTKRS*FRSSKCTTSTFLPN
Trigger: GTTTGGCAAGAAGGTGCTGGTGGTGCACTTTGAGGACCTGAAGCAGGACCTCTTTGTCCAGCTGGGCCGGATGGTCAGCCTGCTGGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTTGGCGAGCCCACGTGTaGCCAGCACCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFWRAHV*PAPGKL
Trigger: CAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCCA...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp GCAATGCTTGAGGCTTCACCTGTGTCCCGGAAACCTCTGCCCAGATaGATGTCACCCAAGAAGGACAGCTCAGCACCCTCAGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: AMLEASPVSRKPLPR*MSPKKDSSAPSAGP
Trigger: AGGCCCAGCTGAGGGTGCTGAGCTGTCCTTCTTGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACACAGGTGAAGCCTCAAGCATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 90 bp TTGGCCATAGTGGGATCATTCCGGACTGGCTCTCTGGGGCTTGGCTaGGGTGCTTGGGAGAGGATGGAAGGGGCTTGGTTTCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: LAIVGSFRTGSLGLG*GAWERMEGAWFPKL
Trigger: AAGCTTGGGAAACCAAGCCCCTTCCATCCTCTCCCAAGCACCCCAGCCAAGCCCCAGAGAGCCAGTCCGGAATGATCCCACTATGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCTGCCTCGCTCGCCCTaGCACTCCATGTCGCACTCT +
Preference number: 5 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDLPRSP*HSMSHS
Trigger: AGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGCTCGCCGCTGCCTCCTaGGCTGCCTTGCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLLAAAS*AALLAP
Trigger: GGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAG...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS TCA 90 bp CACCGTAGTCGCCAAGCTTGGCTCTCTCATTCCCATCCTTGCCCTTaGACCAGGGTCCGTACCTGCGAGCAATGCTTGAGGCTTCACCTG +
Preference number: 5 (lower is better)
Translates to: HRSRQAWLSHSHPCP*TRVRTCEQCLRLHL
Trigger: CAGGTGAAGCCTCAAGCATTGCTCGCAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGAATGAGAGAGCCAAGCTTGGCGACTACGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS TCA 90 bp CTGCATGTCCGCAGTATAGGGGTCATACTCGAGCTTCCGGAGCCCTaGGCGCTTGAAGTTGCCATCCTTCTGGCTCTCCACACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LHVRSIGVILELPEP*ALEVAILLALHTEQ
Trigger: CTGCTCTGTGTGGAGAGCCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCCGGAAGCTCGAGTATGACCCCTATACTGCGGACATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp ACCTGCGAGCAATGCTTGAGGCTTCACCTGTGTCCCGGAAACCTCTaGCCAGATGCATGTCACCCAAGAAGGACAGCTCAGCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: TCEQCLRLHLCPGNL*PDACHPRRTAQHPQ
Trigger: CTGAGGGTGCTGAGCTGTCCTTCTTGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 90 bp TGGCCTCTTCCCCAGCTGAAGACCAAGCTTGGCCTTTCTACCTCATaGGAACAGAAGCTGGTGGGCCTCCATCCAGTCAGGCATCAGGAC +
Preference number: 5 (lower is better)
Translates to: WPLPQLKTKLGLSTS*EQKLVGLHPVRHQD
Trigger: GTCCTGATGCCTGACTGGATGGAGGCCCACCAGCTTCTGTTCCCATGAGGTAGAAAGGCCAAGCTTGGTCTTCAGCTGGGGAAGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551057.5
ENST00000551106.1
ENST00000551734.1
CDS CCA 90 bp CTGGAATTTGAACCAGAGCTTGGCCATAGTGGGATCATTCCGGACTaGCTCTCTGGGGCTTGGCTGGGGTGCTTGGGAGAGGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: LEFEPELGHSGIIPD*LSGAWLGCLGEDGR
Trigger: CCTTCCATCCTCTCCCAAGCACCCCAGCCAAGCCCCAGAGAGCCAGTCCGGAATGATCCCACTATGGCCAAGCTCTGGTTCAAATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGCGGACAACCCTCCCCTaGAGGGCTCGGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRRTTLP*RARLQA
Trigger: AGCCTGGAGCCGAGCCCTCAAGGGGAGGGTTGTCCG...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCTGCCTCGCTCGCCCTaGCACTCCATGTCGCACTCT +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYLPRSP*HSMSHS
Trigger: AGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTCCGCTTTCGTGCGTCTaGATGCAGATGGTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFPLSCV*MQMVRP
Trigger: CGGACGGACCATCTGCATCAAGACGCACGAAAGCGG...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCCCGCTTTCGTGCGTCTaGATGCAGATGGTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAPLSCV*MQMVRP
Trigger: CGGACGGACCATCTGCATCAAGACGCACGAAAGCGG...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TATGCCAGAGTCACACAGGCACAAAGCAGTTATACACCAACCCGCCTGCCACCCCGGAGCCCTGAGCGCTaGAAGTTGCCATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: YARVTQAQSSYTPTRLPPRSPER*KLPSFW
Trigger: CCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCCG...GGGTGGCAGGCGGGTTGGTGTATAACTGCTTTGTGCCTGTGTGACTCTGGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGCGGTGCCAGCACTTCTaGGGTGGAGATGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWRCQHF*GGDEKG
Trigger: CCCCTTCTCATCTCCACCCAAGAAGTGCTGGCACCG...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATAGTGTGCGCCTTGAATaGCAGCAGCGGCGACAGCGG +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYSVRLE*QQRRQR
Trigger: CCGCTGTCGCCGCTGCTGCAATTCAAGGCGCACACT...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS TCA 90 bp CCAAGGCCAGAAGGGGAGGGCAAGTTCAATGCTTGGCTGAGGCCATaGGAAAGGATGGAGCTTACCAGCCCTCCCAAACTGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PRPEGEGKFNAWLRP*ERMELTSPPKLKVS
Trigger: GCTCACCTTCAGTTTGGGAGGGCTGGTAAGCTCCATCCTTTCTCATGGCCTCAGCCAAGCATTGAACTTGCCCTCCCCTTCTGGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACCTGCGAGCAATGCTaGAGGCTTCACCTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFTCEQC*RLHLCP
Trigger: GGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGGT...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCTTCCCATCCTTGCCCTaGAACCAGGGTCCGTACCTG +
Preference number: 5 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAFPSLP*NQGPYL
Trigger: CAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGAA...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGTGGCGAGCCCACGTGTaGCCAGCACCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLWRAHV*PAPGKL
Trigger: CAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCCA...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCCGCCGTACTTGCGGTaGAACTCAGCCATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTPPYLR*NSAMRA
Trigger: AGCCCTCATGGCTGAGTTCAACCGCAAGTACGGCGG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCGTTAGGTTCCGCCCTTaGAGGGCTGCATCCACCATC +
Preference number: 5 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLVRFRP*RAASTI
Trigger: GATGGTGGATGCAGCCCTCAAAGGGCGGAACCTAAC...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACGGGAAGCTGGCCCTGTaGGACTATGATCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDGKLAL*DYDQGE
Trigger: CTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCC...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS TCA 90 bp TTAGGGTTGTGGAGAACATCACATGAGCCAGTGTACGTGATGTCCTaGGAAGAGTGCCTGGGGCATGGGAGGCGGAACCTGAAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LGLWRTSHEPVYVMS*EECLGHGRRNLKGL
Trigger: GAGACCCTTCAGGTTCCGCCTCCCATGCCCCAGGCACTCTTCTCAGGACATCACGTACACTGGCTCATGTGATGTTCTCCACAACCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS TCA 90 bp CAGGACTCAGGGATGCCACCTCTTAGGGTTGTGGAGAACATCACATaGGCCAGTGTACGTGATGTCCTGAGAAGAGTGCCTGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: QDSGMPPLRVVENIT*ASVRDVLRRVPGAW
Trigger: CCATGCCCCAGGCACTCTTCTCAGGACATCACGTACACTGGCTCATGTGATGTTCTCCACAACCCTAAGAGGTGGCATCCCTGAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS GCA 90 bp AGAAGCTGGTGGGCCTCCATCCAGTCAGGCATCAGGACTCAGGGATaGCACCTGAAGCAATCCCTTGCGAATTTTGATGTCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RSWWASIQSGIRTQG*HLKQSLANFDVWEP
Trigger: TGGCTCCCAGACATCAAAATTCGCAAGGGATTGCTTCAGGTGGCATCCCTGAGTCCTGATGCCTGACTGGATGGAGGCCCACCAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000550529.5
CDS GCA 90 bp AAAGCCAGAGTGAAGGAAGACAAGGCTCCCAGCAGTCAGGTAGAGTaGCAGGAAGGTAAAGAAGCGCACAGGTTTCCGGCGGAAGTACCG +
Preference number: 5 (lower is better)
Translates to: KARVKEDKAPSSQVE*QEGKEAHRFPAEVP
Trigger: CGGTACTTCCGCCGGAAACCTGTGCGCTTCTTTACCTTCCTGGCACTCTACCTGACTGCTGGGAGCCTTGTCTTCCTTCACTCTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp AGAAGCTGGTGGGCCTCCATCCAGTCAGGCATCAGGACTCAGGGATaGCACCTCTTAGGGTTGTGGAGAACATCACATGAGCCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: RSWWASIQSGIRTQG*HLLGLWRTSHEPVY
Trigger: GTACACTGGCTCATGTGATGTTCTCCACAACCCTAAGAGGTGGCATCCCTGAGTCCTGATGCCTGACTGGATGGAGGCCCACCAGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS-3UTR CAA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCAAGGCCAGGGAAAGGTaGTCGGGCCTGCGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSKARER*SGLRKQ
Trigger: CTGCTTCCGCAGGCCCGACAACCTTTCCCTGGCCTT...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCAAGGCCAGGGAAAGGTaGTCGGGCCTGCGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAKARER*SGLRKQ
Trigger: CTGCTTCCGCAGGCCCGACAACCTTTCCCTGGCCTT...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGTGGCGAGCCCACGTGTaGCCAGCACCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLWRAHV*PAPGKL
Trigger: CAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCCA...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCATGTGGCCGCCGTACTaGCGGTTGAACTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTMWPPY*RLNSAM
Trigger: CATGGCTGAGTTCAACCGCAAGTACGGCGGCCACAT...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCCCTGAGCGCTTGAAGTaGCCATCCTTCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTPERLK*PSFWLS
Trigger: GGAGAGCCAGAAGGATGGCAACTTCAAGCGCTCAGG...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATGTTAGGTTCCGCCCTTaGAGGGCTGCATCCACCATC +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYVRFRP*RAASTI
Trigger: GATGGTGGATGCAGCCCTCAAAGGGCGGAACCTAAC...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGACGGTGCCAGCACTTCTaGGGTGGAGATGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RRWPELNIGASTSWVEMRRCQHF*GGDEKG
Trigger: CCCCTTCTCATCTCCACCCAAGAAGTGCTGGCACCG...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATTCTTCAGGCAGAAGCTaGTGGTCAGAGGGGACCACC +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYSSGRS*WSEGTT
Trigger: GGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGA...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 90 bp CCTCAGGCCAATGGATCTGGGTTATTTCACTGGGGGCCTTGTTTCTaGCCTCTTCCCCAGCTGAAGACCAAGCTTGGCCTTTCTACCTCA +
Preference number: 5 (lower is better)
Translates to: PQANGSGLFHWGPCF*PLPQLKTKLGLSTS
Trigger: TGAGGTAGAAAGGCCAAGCTTGGTCTTCAGCTGGGGAAGAGGCCAGAAACAAGGCCCCCAGTGAAATAACCCAGATCCATTGGCCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551057.5
ENST00000551106.1
ENST00000551734.1
CDS CCA 90 bp TGCCCTTTCTCTGCTCCTCAGGCCAATGGATCTGGGTTATTTCACTaGGGGCCTTGTTTCTGGCCTCTTCCCCAGCTGAAGACCAAGCTT +
Preference number: 5 (lower is better)
Translates to: CPFSAPQANGSGLFH*GPCFWPLPQLKTKL
Trigger: AAGCTTGGTCTTCAGCTGGGGAAGAGGCCAGAAACAAGGCCCCCAGTGAAATAACCCAGATCCATTGGCCTGAGGAGCAGAGAAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551057.5
ENST00000551106.1
ENST00000551734.1
CDS CCA 90 bp GCCAGGAAGGTAAAGAAGCGCACAGGTTTCCGGCGGAAGTACCGCTaGAATTTGAACCAGAGCTTGGCCATAGTGGGATCATTCCGGACT +
Preference number: 5 (lower is better)
Translates to: ARKVKKRTGFRRKYR*NLNQSLAIVGSFRT
Trigger: AGTCCGGAATGATCCCACTATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCGGAAACCTGTGCGCTTCTTTACCTTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS CCA 90 bp AATAAGATTTGCAAAGATCCTGGTACGGCTCCTTTGCCCTTCCAGTaGGCATGCGCAGCAAAGCCTATGTGGCCGCCGTACTTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: NKICKDPGTAPLPFQ*ACAAKPMWPPYLRL
Trigger: CAACCGCAAGTACGGCGGCCACATAGGCTTTGCTGCGCATGCCCACTGGAAGGGCAAAGGAGCCGTACCAGGATCTTTGCAAATCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CAA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAACCTGCGAGCAATGCTaGAGGCTTCACCTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: GCEISAQKGQASGAKFLQTCEQC*RLHLCP
Trigger: GGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGGT...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGATTCCCATCCTTGCCCTaGAACCAGGGTCCGTACCTG +
Preference number: 5 (lower is better)
Translates to: RRWPELNIGASTSWVEMRFPSLP*NQGPYL
Trigger: CAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGAA...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATTCCCATCCTTGCCCTaGAACCAGGGTCCGTACCTG +
Preference number: 5 (lower is better)
Translates to: GCEISAQKGQASGAKFLQFPSLP*NQGPYL
Trigger: CAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGAA...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAACCCCGTTCAGCACAGTaGTCCTGGCAACGGAAGATG +
Preference number: 5 (lower is better)
Translates to: GCEISAQKGQASGAKFLQPRSAQ*SWQRKM
Trigger: CATCTTCCGTTGCCAGGACAACTGTGCTGAACGGGG...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCCCGCCGTACTTGCGGTaGAACTCAGCCATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSPPYLR*NSAMRA
Trigger: AGCCCTCATGGCTGAGTTCAACCGCAAGTACGGCGG...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAGTTAGGTTCCGCCCTTaGAGGGCTGCATCCACCATC +
Preference number: 5 (lower is better)
Translates to: GCEISAQKGQASGAKFLQVRFRP*RAASTI
Trigger: GATGGTGGATGCAGCCCTCAAAGGGCGGAACCTAAC...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCTGTGGACGCATCATCTaGGGTAGTAGTCATCGGGGA +
Preference number: 5 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLCGRII*GSSHRG
Trigger: TCCCCGATGACTACTACCCAAGATGATGCGTCCACA...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGCGGTGCCAGCACTTCTaGGGTGGAGATGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLRCQHF*GGDEKG
Trigger: CCCCTTCTCATCTCCACCCAAGAAGTGCTGGCACCG...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAGGGAAGCTGGCCCTGTaGGACTATGATCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: GCEISAQKGQASGAKFLQGKLAL*DYDQGE
Trigger: CTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCC...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGCCCTGTGCCCTTGCTTaGCATGGCCAGGTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRPCALA*HGQVPR
Trigger: CCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGG...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp AAATCGAGCGAAATAAGATTTGCAAAGATCCTGGTACGGCTCCTTTaGCCTTCCAGTGGGCATGCGCAGCAAAGCCTATGTGGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: KSSEIRFAKILVRLL*PSSGHAQQSLCGRR
Trigger: ACGGCGGCCACATAGGCTTTGCTGCGCATGCCCACTGGAAGGGCAAAGGAGCCGTACCAGGATCTTTGCAAATCTTATTTCGCTCGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CAA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTAATAACCACCTGGGTTaGGGCAGTGGAGAACACACA +
Preference number: 5 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFNNHLG*GSGEHT
Trigger: TGTGTGTTCTCCACTGCCCAAACCCAGGTGGTTATT...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR CAA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCGAGGATGGAAGGGGCTaGGTTTCCCAAGCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTEDGRG*VSQAFL
Trigger: AAGGAAAGCTTGGGAAACCAAGCCCCTTCCATCCTC...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTACCTGCGAGCAATGCTaGAGGCTTCACCTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTTCEQC*RLHLCP
Trigger: GGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGGT...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCCCCCGTTCAGCACAGTaGTCCTGGCAACGGAAGATG +
Preference number: 5 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSPRSAQ*SWQRKM
Trigger: CATCTTCCGTTGCCAGGACAACTGTGCTGAACGGGG...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATAAGGCCAGGGAAAGGTaGTCGGGCCTGCGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDKARER*SGLRKQ
Trigger: CTGCTTCCGCAGGCCCGACAACCTTTCCCTGGCCTT...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCATGCAACGGTTGTCTaGGACTTGTGTCTGGTACAC +
Preference number: 5 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLHATVV*DLCLVH
Trigger: GTGTACCAGACACAAGTCCAAGACAACCGTTGCATG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCACATGCAACGGTTGTCTaGGACTTGTGTCTGGTACAC +
Preference number: 5 (lower is better)
Translates to: VDLRNLQAEACGQRGPPAHATVV*DLCLVH
Trigger: GTGTACCAGACACAAGTCCAAGACAACCGTTGCATG...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCATGTGGCCGCCGTACTaGCGGTTGAACTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSMWPPY*RLNSAM
Trigger: CATGGCTGAGTTCAACCGCAAGTACGGCGGCCACAT...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACCTGAGCGCTTGAAGTaGCCATCCTTCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKPERLK*PSFWLS
Trigger: GGAGAGCCAGAAGGATGGCAACTTCAAGCGCTCAGG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGCGGAGCCCTGAGCGCTaGAAGTTGCCATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQRSPER*KLPSFW
Trigger: CCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCCG...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCTGTGGACGCATCATCTaGGGTAGTAGTCATCGGGGA +
Preference number: 5 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTCGRII*GSSHRG
Trigger: TCCCCGATGACTACTACCCAAGATGATGCGTCCACA...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATTGTGGACGCATCATCTaGGGTAGTAGTCATCGGGGA +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYCGRII*GSSHRG
Trigger: TCCCCGATGACTACTACCCAAGATGATGCGTCCACA...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGGGAAGCTGGCCCTGTaGGACTATGATCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKGKLAL*DYDQGE
Trigger: CTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCCCTGTGCCCTTGCTTaGCATGGCCAGGTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSPCALA*HGQVPR
Trigger: CCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCTCTTCAGGCAGAAGCTaGTGGTCAGAGGGGACCACC +
Preference number: 5 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIASSGRS*WSEGTT
Trigger: GGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGA...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS TCA 90 bp GGTGGGCCTCCATCCAGTCAGGCATCAGGACTCAGGGATGCCACCTaGAGCAATCCCTTGCGAATTTTGATGTCTGGGAGCCAAAATAAA +
Preference number: 5 (lower is better)
Translates to: GGPPSSQASGLRDAT*SNPLRILMSGSQNK
Trigger: TTTATTTTGGCTCCCAGACATCAAAATTCGCAAGGGATTGCTTCAGGTGGCATCCCTGAGTCCTGATGCCTGACTGGATGGAGGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000550529.5
CDS GCA 90 bp GGCCACTCTCCTACAGATGCTGTGCAAATCGAGCGAAATAAGATTTaGAAAGATCCTGGTACGGCTCCTTTGCCCTTCCAGTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: GHSPTDAVQIERNKI*KDPGTAPLPFQWAC
Trigger: GCATGCCCACTGGAAGGGCAAAGGAGCCGTACCAGGATCTTTGCAAATCTTATTTCGCTCGATTTGCACAGCATCTGTAGGAGAGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CAA 90 bp CAGAAGGGCAGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGAAGTACCGCTGGAATTaGAACCAGAGCTTGGCCATA +
Preference number: 5 (lower is better)
Translates to: QKGSVRLTGAHHGEMCHWKYRWN*NQSLAI
Trigger: TATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTT...CCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCAGAAGTCCACGCATTaGTCCACAGACATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYQKSTH*STDMFS
Trigger: GCTGAACATGTCTGTGGACAAATGCGTGGACTTCTG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAACTCTGGCCACTCTTaGCCCTTCCAGTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSNSGHS*PFQWAC
Trigger: GCATGCCCACTGGAAGGGCAAAGAGTGGCCAGAGTT...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCAGGACCACCAGCACCTTCTaGCCAAACTTGAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: WCLQLTYCEHHYLPTLSRTTSTF*PNLSQS
Trigger: GGACTGGCTCAAGTTTGGCAAGAAGGTGCTGGTGGT...CCTGGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCACCACCAGCACCTTCTaGCCAAACTTGAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSTTSTF*PNLSQS
Trigger: GGACTGGCTCAAGTTTGGCAAGAAGGTGCTGGTGGT...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGGACCTGCACAGACTCATTACAAATAAGATGGTCATACCGGCAACTTGTGGGACGGAGCCCTGAGCGCTaGAAGTTGCCATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RTCTDSLQIRWSYRQLVGRSPER*KLPSFW
Trigger: CCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCCG...TCCCACAAGTTGCCGGTATGACCATCTTATTTGTAATGAGTCTGTGCAGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCTACAGATGAGGGAATaGGGGAAGTGTGCCACAGGT +
Preference number: 5 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKLQMRE*GKCATG
Trigger: ACCTGTGGCACACTTCCCCAATTCCCTCATCTGTAG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGAACTGACCCAGGTCTaGGACCAAGAGTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKELTQV*DQESPR
Trigger: TCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTCCTGGTACGGCTCCTTaGCCCTTCCAGTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPPGTAP*PFQWAC
Trigger: GCATGCCCACTGGAAGGGCAAAGGAGCCGTACCAGG...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CAA 90 bp ACACACACACACACACACACACTAGGAAAACATCCCATTTGTGAACCTGTCTTAGCCTCCTTGGCTGCCTaGCTCGCTCCCCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: THTHTHTLGKHPICEPVLASLAA*LAPLDF
Trigger: GAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGC...TAAGACAGGTTCACAAATGGGATGTTTTCCTAGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CCA 90 bp AAGGATGGAGCTTACCAGCCCTCCCAAACTGAAGGTGAGCTTCTTTaGGCCAACAAGGGGGTTTTGAGGCTCAGAACACACATAAGTTGG +
Preference number: 5 (lower is better)
Translates to: KDGAYQPSQTEGELL*ANKGVLRLRTHISW
Trigger: CCAACTTATGTGTGTTCTGAGCCTCAAAACCCCCTTGTTGGCCCAAAGAAGCTCACCTTCAGTTTGGGAGGGCTGGTAAGCTCCATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
CDS-3UTR CAA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGGGCAAGTTCAATGCTaGGCTGAGGCCATGAGAAAG +
Preference number: 5 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKGQVQC*AEAMRK
Trigger: CTTTCTCATGGCCTCAGCCAAGCATTGAACTTGCCC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTGAGGATGGAAGGGGCTaGGTTTCCCAAGCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTEDGRG*VSQAFL
Trigger: AAGGAAAGCTTGGGAAACCAAGCCCCTTCCATCCTC...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCACGGTTGTCTTGGACTaGTGTCTGGTACACAATGAA +
Preference number: 5 (lower is better)
Translates to: SCPGGGKASSSFLRSSVATVVLD*CLVHNE
Trigger: TTCATTGTGTACCAGACACAAGTCCAAGACAACCGT...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATAACTCTGGCCACTCTTaGCCCTTCCAGTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDNSGHS*PFQWAC
Trigger: GCATGCCCACTGGAAGGGCAAAGAGTGGCCAGAGTT...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp AGTGTAAGACTGACTGGAGCCCACCATGGAGAGATGTGTCACTGGGGCTCTCTCCAGAAATCCTTCGGTTaGGCATTTCAGCATCAAGAG +
Preference number: 5 (lower is better)
Translates to: SVRLTGAHHGEMCHWGSLQKSFG*AFQHQE
Trigger: CTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTG...GAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTCAGAAATCCTTCGGTTaGGCATTTCAGCATCAAGAG +
Preference number: 5 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFQKSFG*AFQHQE
Trigger: CTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTG...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AGGGGGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTTGGTCTCTTTGCTACTaGGGAATGAGCATTTACCTG +
Preference number: 5 (lower is better)
Translates to: RGLRNLSPEGTSIWGQVFWSLCY*GMSIYL
Trigger: CAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCA...AAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCCCCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCATGCCCTGGAGGTGGAAAGGCAAGCAGCTCATTTCTGAGAAGCAGTGTGGCCTGGTCTCTTTGCTACTaGGGAATGAGCATTTACCTG +
Preference number: 5 (lower is better)
Translates to: SCPGGGKASSSFLRSSVAWSLCY*GMSIYL
Trigger: CAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCA...GGCCACACTGCTTCTCAGAAATGAGCTGCTTGCCTTTCCACCTCCAGGGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCAGAGGGGACCACCAGCATTCTCCATGGTCTCTTaGCTACTTGGGAATGAGCAT +
Preference number: 5 (lower is better)
Translates to: VDLRNLQAEACGQRGPPAFSMVS*LLGNEH
Trigger: ATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAA...TGCTGGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTCCCTGTGCCCTTGCTTaGCATGGCCAGGTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPPCALA*HGQVPR
Trigger: CCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGG...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGCTAATCCCTGTGCCCTaGCTTTGCATGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQLIPVP*LCMARF
Trigger: GAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAG...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAACTACAGATGAGGGAATaGGGGAAGTGTGCCACAGGT +
Preference number: 5 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKLQMRE*GKCATG
Trigger: ACCTGTGGCACACTTCCCCAATTCCCTCATCTGTAG...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGAACTGACCCAGGTCTaGGACCAAGAGTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQELTQV*DQESPR
Trigger: TCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTTCTTCAGGCAGAAGCTaGTGGTCAGAGGGGACCACC +
Preference number: 5 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGSSGRS*WSEGTT
Trigger: GGTGGTCCCCTCTGACCACAAGCTTCTGCCTGAAGA...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp TGTGAGAATAGCACTTGGAGAAGGTTTCTGAGGGTTACCAGCAGCTaGAGTTCACTTCTTGCCCTTTCTCTGCTCCTCAGGCCAATGGAT +
Preference number: 5 (lower is better)
Translates to: CENSTWRRFLRVTSS*SSLLALSLLLRPMD
Trigger: ATCCATTGGCCTGAGGAGCAGAGAAAGGGCAAGAAGTGAACTGCAGCTGCTGGTAACCCTCAGAAACCTTCTCCAAGTGCTATTCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551734.1
CDS GCA 90 bp GGGCATAGTTCCTCACGAACTCTGGCCACTCTCCTACAGATGCTGTaGAAATCGAGCGAAATAAGATTTGCAAAGATCCTGGTACGGCTC +
Preference number: 5 (lower is better)
Translates to: GHSSSRTLATLLQML*KSSEIRFAKILVRL
Trigger: GAGCCGTACCAGGATCTTTGCAAATCTTATTTCGCTCGATTTGCACAGCATCTGTAGGAGAGTGGCCAGAGTTCGTGAGGAACTATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS-3UTR CAA 90 bp GGTATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGCAGAAGTCCACGCATTaGTCCACAGACATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GIQGWGRDGTLDQHFVRLQKSTH*STDMFS
Trigger: GCTGAACATGTCTGTGGACAAATGCGTGGACTTCTG...CAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTGGATAGCAAAGGACCCATTTGTAGGGGTCAGAAGGGCAGTGTAAGACTGACTCAGAAGTCCACGCATTaGTCCACAGACATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LDSKGPICRGQKGSVRLTQKSTH*STDMFS
Trigger: GCTGAACATGTCTGTGGACAAATGCGTGGACTTCTG...AGTCAGTCTTACACTGCCCTTCTGACCCCTACAAATGGGTCCTTTGCTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGAAAGCAATGAGCTGCTaGGACTTGCCTGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EMTQFHSPHSLKGPQGKLKAMSC*DLPGRN
Trigger: GTTCCTGCCAGGCAAGTCCAAGCAGCTCATTGCTTT...CAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGAAAGCAATGAGCTGCTaGGACTTGCCTGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQKAMSC*DLPGRN
Trigger: GTTCCTGCCAGGCAAGTCCAAGCAGCTCATTGCTTT...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCACCGCCGTACTTGCGGTaGAACTCAGCCATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ATCGIQFQNIERQENTKAPPYLR*NSAMRA
Trigger: AGCCCTCATGGCTGAGTTCAACCGCAAGTACGGCGG...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATACCACCAGCACCTTCTaGCCAAACTTGAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDTTSTF*PNLSQS
Trigger: GGACTGGCTCAAGTTTGGCAAGAAGGTGCTGGTGGT...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCATGCAGGAAACTCATaGAAGGCAAAGAGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKHAGNS*KAKSSQ
Trigger: TTGGCTGCTCTTTGCCTTCAATGAGTTTCCTGCATG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGGCAAAGAGCCTTGCATCAAGAGCCTaGACAATTGCCATGGGGCAT +
Preference number: 5 (lower is better)
Translates to: SLPLSLLCHAGNSLKAKSLASRA*TIAMGH
Trigger: ATGCCCCATGGCAATTGTCAAGGCTCTTGATGCAAG...GCTCTTTGCCTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CAGCAAAGAACTGACCCAGGTCTTGGACCAAGAGTCTCCCAGAGAGAGTCAACCTGGTCTCTTTGCTACTaGGGAATGAGCATTTACCTG +
Preference number: 5 (lower is better)
Translates to: QQRTDPGLGPRVSQRESTWSLCY*GMSIYL
Trigger: CAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCA...GGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATTTCTCCATGGTCTCTTaGCTACTTGGGAATGAGCAT +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYFSMVS*LLGNEH
Trigger: ATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAA...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAGGGATAGTGTGCGCCTaGAATTGCAGCAGCGGCGAC +
Preference number: 5 (lower is better)
Translates to: ATCGIQFQNIERQENTKAGIVCA*NCSSGD
Trigger: GTCGCCGCTGCTGCAATTCAAGGCGCACACTATCCC...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CCA 90 bp GTGTTTTGGTCTTACTCAAGTTGTAGCTGTTGCAGAATAACCACCTaGGTTTGGGCAGTGGAGAACACACAAGCGAACATCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VFWSYSSCSCCRITT*VWAVENTQANISTS
Trigger: GGAGGTGGAGATGTTCGCTTGTGTGTTCTCCACTGCCCAAACCCAGGTGGTTATTCTGCAACAGCTACAACTTGAGTAAGACCAAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000551057.5
CDS-3UTR CAA 90 bp GGCTGCGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAAAATTTGAACCAGAGCTaGGCCATAGTGGGATCATTC +
Preference number: 5 (lower is better)
Translates to: GCEISAQKGQASGAKFLQNLNQS*AIVGSF
Trigger: GAATGATCCCACTATGGCCAAGCTCTGGTTCAAATT...TTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGCCTGAGCGCTTGAAGTaGCCATCCTTCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTPERLK*PSFWLS
Trigger: GGAGAGCCAGAAGGATGGCAACTTCAAGCGCTCAGG...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TTTCATTCACCCCATTCCTTAAAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACCAACACTTTGTAAGATaGATGCTCCGTGATTTAGGT +
Preference number: 5 (lower is better)
Translates to: FHSPHSLKGPQGKLALLDQHFVR*MLRDLG
Trigger: ACCTAAATCACGGAGCATCAATCTTACAAAGTGTTG...GTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTTTAAGGAATGGGGTGAATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TATCCAGGGTTGGGGAAGAGATGGGACTCTGGACCAACACTTTGTAAGATTGATCTACAGATGAGGGAATaGGGGAAGTGTGCCACAGGT +
Preference number: 5 (lower is better)
Translates to: YPGLGKRWDSGPTLCKIDLQMRE*GKCATG
Trigger: ACCTGTGGCACACTTCCCCAATTCCCTCATCTGTAG...ATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATCTCTTCCCCAACCCTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TCAAAACATAGAAAGGCAGGAGAACACAAAGGCAATTTTACACACAGAGGCACGAAGGGTCTCCGCCACTaGCAAACTCTGCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SKHRKAGEHKGNFTHRGTKGLRH*QTLPAE
Trigger: CTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTT...CGTGCCTCTGTGTGTAAAATTGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CCA 90 bp AGGGAAGTCACTTGCCCAAGGTCACACAGCTGGTTAGAGGTGAAATaGGGATTTGATTTCAGTCTGTTTGACTCCGGGATGGAAACTCTT +
Preference number: 5 (lower is better)
Translates to: REVTCPRSHSWLEVK*GFDFSLFDSGMETL
Trigger: AAGAGTTTCCATCCCGGAGTCAAACAGACTGAAATCAAATCCCCATTTCACCTCTAACCAGCTGTGTGACCTTGGGCAAGTGACTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000551057.5
ENST00000551734.1
ENST00000552195.5
CDS-3UTR CAA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGAATCCCTTGCGAATTTaGATGTCTGGGAGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKNPLRI*MSGSQN
Trigger: ATTTTGGCTCCCAGACATCAAAATTCGCAAGGGATT...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332082.8
CDS-3UTR CAA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTGGGCAAGTTCAATGCTaGGCTGAGGCCATGAGAAAG +
Preference number: 5 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPGQVQC*AEAMRK
Trigger: CTTTCTCATGGCCTCAGCCAAGCATTGAACTTGCCC...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGAAGTACCGCTGGAATTaGAACCAGAGCTTGGCCATA +
Preference number: 5 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQKYRWN*NQSLAI
Trigger: TATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTT...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCCATGCAGGAAACTCATaGAAGGCAAAGAGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSHAGNS*KAKSSQ
Trigger: TTGGCTGCTCTTTGCCTTCAATGAGTTTCCTGCATG...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCCAGAAATCCTTCGGTTaGGCATTTCAGCATCAAGAG +
Preference number: 5 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAQKSFG*AFQHQE
Trigger: CTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTG...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACTAATCCCTGTGCCCTaGCTTTGCATGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PQKSFGLAFQHQESSVCILIPVP*LCMARF
Trigger: GAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTCCCAGTAGAAGGGAGGCCAACCCCTCCACTGCTTCATGAAAGAAGACTAAAAGGTCATACCGGCAACTaGTGGGATACAGTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: LPVEGRPTPPLLHERRLKGHTGN*WDTVSK
Trigger: TTTTGAAACTGTATCCCACAAGTTGCCGGTATGACC...TTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCTACTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp AAGGGCCCCCAAGGGAAGCTGGCCCTGTTGGACTATGATCAAGGGGAGATATATCCATTTTCCTACATATaGTTCTTCACTTCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: KGPQGKLALLDYDQGEIYPFSYI*FFTSEC
Trigger: ACACTCTGAAGTGAAGAACAATATGTAGGAAAATGG...ATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTTGGGGGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCGTTCAGCACAGTaGTCCTGGCAACGGAAGATG +
Preference number: 5 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGPRSAQ*SWQRKM
Trigger: CATCTTCCGTTGCCAGGACAACTGTGCTGAACGGGG...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp ACATGGTGTCTCCAATTAACCTACTGTGAGCACCATTACCTCCCCACACTATCCACGGTTGTCTTGGACTaGTGTCTGGTACACAATGAA +
Preference number: 5 (lower is better)
Translates to: TWCLQLTYCEHHYLPTLSTVVLD*CLVHNE
Trigger: TTCATTGTGTACCAGACACAAGTCCAAGACAACCGT...GGATAGTGTGGGGAGGTAATGGTGCTCACAGTAGGTTAATTGGAGACACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTCATGCAACGGTTGTCTaGGACTTGTGTCTGGTACAC +
Preference number: 5 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPHATVV*DLCLVH
Trigger: GTGTACCAGACACAAGTCCAAGACAACCGTTGCATG...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GCAACTTGTGGGATACAGTTTCAAAACATAGAAAGGCAGGAGAACACAAAGGCAAAAGCAATGAGCTGCTaGGACTTGCCTGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: ATCGIQFQNIERQENTKAKAMSC*DLPGRN
Trigger: GTTCCTGCCAGGCAAGTCCAAGCAGCTCATTGCTTT...TGCCTTTGTGTTCTCCTGCCTTTCTATGTTTTGAAACTGTATCCCACAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp GAGCAGTGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGATGTGGCCGCCGTACTaGCGGTTGAACTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: EQCLYRNDTISFTPFLKGMWPPY*RLNSAM
Trigger: CATGGCTGAGTTCAACCGCAAGTACGGCGGCCACAT...CCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CTCGCATTTAATGATGGTGTTGACCTGAGGAATCTTCAGGCAGAAGCTTGTGGTCATGCAGGAAACTCATaGAAGGCAAAGAGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LAFNDGVDLRNLQAEACGHAGNS*KAKSSQ
Trigger: TTGGCTGCTCTTTGCCTTCAATGAGTTTCCTGCATG...ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp CCTGGGCAATCTCTTCCCTTGAGCCTCCTCTGTCATGCAGGAAACTCATTGAAGCAACACTTTGTAAGATaGATGCTCCGTGATTTAGGT +
Preference number: 5 (lower is better)
Translates to: PGQSLPLSLLCHAGNSLKQHFVR*MLRDLG
Trigger: ACCTAAATCACGGAGCATCAATCTTACAAAGTGTTG...CTTCAATGAGTTTCCTGCATGACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCACTAATCCCTGTGCCCTaGCTTTGCATGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPLIPVP*LCMARF
Trigger: GAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAG...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp TGTTTGTATAGAAATGACACAATTTCATTCACCCCATTCCTTAAAGGGCCCCCAGAACTGACCCAGGTCTaGGACCAAGAGTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: CLYRNDTISFTPFLKGPPELTQV*DQESPR
Trigger: TCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTC...TGGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS-3UTR CAA 90 bp GGGACTCTGGACCAACACTTTGTAAGATTGATGCTCCGTGATTTAGGTCCTCAGGGTCATACCGGCAACTaGTGGGATACAGTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: GTLDQHFVRLMLRDLGPQGHTGN*WDTVSK
Trigger: TTTTGAAACTGTATCCCACAAGTTGCCGGTATGACC...CTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS TCA 90 bp ATCTGTAACAGATGCCATATGTGCCCCACCCACAGAGTTAAATTCTaGATGTTCATCTGGTTGTCTGAGGGGTTTCTCCAGCACCTTGAA +
Preference number: 5 (lower is better)
Translates to: ICNRCHMCPTHRVKF*MFIWLSEGFLQHLE
Trigger: TTCAAGGTGCTGGAGAAACCCCTCAGACAACCAGATGAACATTCAGAATTTAACTCTGTGGGTGGGGCACATATGGCATCTGTTACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS-3UTR CAA 90 bp AGAAGGTGGCCTGAGTTAAACATCGGTGCCAGCACTTCTTGGGTGGAGATGAGACCATTTTCCTACATATaGTTCTTCACTTCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: RRWPELNIGASTSWVEMRPFSYI*FFTSEC
Trigger: ACACTCTGAAGTGAAGAACAATATGTAGGAAAATGG...TCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TTCATGCACACTGACCATTTCCTCCTTTACACGGGTGCAATTCCATACACAAGGACGGTTGTCTTGGACTaGTGTCTGGTACACAATGAA +
Preference number: 5 (lower is better)
Translates to: FMHTDHFLLYTGAIPYTRTVVLD*CLVHNE
Trigger: TTCATTGTGTACCAGACACAAGTCCAAGACAACCGT...CCTTGTGTATGGAATTGCACCCGTGTAAAGGAGGAAATGGTCAGTGTGCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp CGAAATCTCAGCCCAGAAGGGACAAGCATCTGGGGCCAAGTTTTTACAATAGCCCAACACTTTGTAAGATaGATGCTCCGTGATTTAGGT +
Preference number: 5 (lower is better)
Translates to: RNLSPEGTSIWGQVFTIAQHFVR*MLRDLG
Trigger: ACCTAAATCACGGAGCATCAATCTTACAAAGTGTTG...GGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS TCA 90 bp ACCATCTGGCCCAGATTTCTGAAATGTCCATTTGTGTTAATCTTATaGATTGTAGGGGTTGTGGGTTCCTCCCTAGCATGCTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: TIWPRFLKCPFVLIL*IVGVVGSSLACWLD
Trigger: ATCCAACCAGCATGCTAGGGAGGAACCCACAACCCCTACAATTCATAAGATTAACACAAATGGACATTTCAGAAATCTGGGCCAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547185.1
CDS TCA 90 bp AGACATGCTAGAATATTAACATTTGGAAGCAGCTGCAAATATGACTaGTGGGAGTTGGTGTATAAATGCCCCAGCTCCCTTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: RHARILTFGSSCKYD*WELVYKCPSSLAPQ
Trigger: CTGAGGAGCAAGGGAGCTGGGGCATTTATACACCAACTCCCATCAGTCATATTTGCAGCTGCTTCCAAATGTTAATATTCTAGCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS CCA 90 bp GTTCTTCACTTCAGAGTGTTCCTAAAGAACTGTGAGAATAGCACTTaGAGAAGGTTTCTGAGGGTTACCAGCAGCTGCAGTTCACTTCTT +
Preference number: 5 (lower is better)
Translates to: VLHFRVFLKNCENST*RRFLRVTSSCSSLL
Trigger: AAGAAGTGAACTGCAGCTGCTGGTAACCCTCAGAAACCTTCTCCAAGTGCTATTCTCACAGTTCTTTAGGAACACTCTGAAGTGAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551734.1
CDS-3UTR CAA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTAATTTGAACCAGAGCTaGGCCATAGTGGGATCATTC +
Preference number: 5 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPNLNQS*AIVGSF
Trigger: GAATGATCCCACTATGGCCAAGCTCTGGTTCAAATT...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS-3UTR CAA 90 bp TTTACACGCACCTTCTCCATGGTCTCTTTGCTACTTGGGAATGAGCATTTACCTTTCTCCATGGTCTCTTaGCTACTTGGGAATGAGCAT +
Preference number: 5 (lower is better)
Translates to: FTRTFSMVSLLLGNEHLPFSMVS*LLGNEH
Trigger: ATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAA...AGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 90 bp ATCTGGTTGTCTGAGGGGTTTCTCCAGCACCTTGAATGCTTTTTGTaGTTGTGTGGTTGGCAGGCAAGACATGCTAGAATATTAACATTT +
Preference number: 5 (lower is better)
Translates to: IWLSEGFLQHLECFL*LCGWQARHARILTF
Trigger: AAATGTTAATATTCTAGCATGTCTTGCCTGCCAACCACACAAGCACAAAAAGCATTCAAGGTGCTGGAGAAACCCCTCAGACAACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS-3UTR CAA 90 bp CCTCAGAAATCCTTCGGTTTGGCATTTCAGCATCAAGAGAGCAGTGTTTGTATACAGAACACACATAAGTaGGTCCCATTTTCCTACATA +
Preference number: 5 (lower is better)
Translates to: PQKSFGLAFQHQESSVCIQNTHK*VPFSYI
Trigger: TATGTAGGAAAATGGGACCAACTTATGTGTGTTCTG...TATACAAACACTGCTCTCTTGATGCTGAAATGCCAAACCGAAGGATTTCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS CAA 72 bp CGCCCGGGGTCCCTCTCTGCGACTCCCGCGTCCCGCTaGGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RPGSLSATPASR*ARPLCGRLPSC
Trigger: GCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGCGGGAGTCGCAGAGAGGGACCCCGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000551638.5
ENST00000552195.5
CDS CAA 90 bp CTCAGCAGGCGCCCGGGGTCCCTCTCTGCGACTCCCGCGTCCCGCTaGGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTGCTGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LSRRPGSLSATPASR*ARPLCGRLPSCCSG
Trigger: GCCACTGCAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGCGGGAGTCGCAGAGAGGGACCCCGGGCGCCTGCTGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS CCA 72 bp GCCCGGGGTCCCTCTCTGCGACTCCCGCGTCCCGCTTaGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: ARGPSLRLPRPA*RARSVGAFPAA
Trigger: AGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGCGGGAGTCGCAGAGAGGGACCCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000551638.5
ENST00000552195.5
CDS TCA 72 bp GGGCGGAAGCGAGAGGAAGTGAAAGCCGGGCTCCTGTaGGCCTGGCGCTCGGGCGGGCGGCACTGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: GRKREEVKAGLL*AWRSGGRHCGC
Trigger: GCACCCGCAGTGCCGCCCGCCCGAGCGCCAGGCTCACAGGAGCCCGGCTTTCACTTCCTCTCGCTTCCGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS GCA 72 bp TCGGCGCGGAGCTCCGGCCGCCTGGCTCTCTCTCGCTaGCTCGCCGCTGCCTCCTTGGCTGCCTTGCTCGCT +
Preference number: 6 (lower is better)
Translates to: SARSSGRLALSR*LAAASLAALLA
Trigger: AGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAGGCGGCCGGAGCTCCGCGCCGA
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CCA 72 bp CCTGGGCCAGCTGCAGCCGGTAGACAGAGAGGCGGTTaGCGCCGCCGCACACGCTGCCTCGCTCGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: PGPAAAGRQRGG*RRRTRCLARPC
Trigger: GCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGTCTACCGGCTGCAGCTGGCCCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS CAA 90 bp CGCCTGGCTCTCTCTCGCTGCCTCGCCGCTGCCTCCTTGGCTGCCTaGCTCGCTCCCCTGGACTTCACGTCTCCAGCCCTAGCTCCCGCG +
Preference number: 6 (lower is better)
Translates to: RLALSRCLAAASLAA*LAPLDFTSPALAPA
Trigger: CGCGGGAGCTAGGGCTGGAGACGTGAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CAA 90 bp ACAGAGAGGCGGTTGGCGCCGCCGCACACGCTGCCTCGCTCGCCCTaGCACTCCATGTCGCACTCTGCCTCGCTCACGTTCGTCGCCTGG +
Preference number: 6 (lower is better)
Translates to: TERRLAPPHTLPRSP*HSMSHSASLTFVAW
Trigger: CCAGGCGACGAACGTGAGCGAGGCAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS CAA 90 bp AGCTCCGGCCGCCTGGCTCTCTCTCGCTGCCTCGCCGCTGCCTCCTaGGCTGCCTTGCTCGCTCCCCTGGACTTCACGTCTCCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: SSGRLALSRCLAAAS*AALLAPLDFTSPAL
Trigger: TAGGGCTGGAGACGTGAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAGGCGGCCGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS GCA 72 bp GGTTGGCGCCGCCGCACACGCTGCCTCGCTCGCCCTTaGACTCCATGTCGCACTCTGCCTCGCTCACGTTCG +
Preference number: 6 (lower is better)
Translates to: GWRRRTRCLARP*TPCRTLPRSRS
Trigger: CGAACGTGAGCGAGGCAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS CAA 72 bp CGGTTGGCGCCGCCGCACACGCTGCCTCGCTCGCCCTaGCACTCCATGTCGCACTCTGCCTCGCTCACGTTC +
Preference number: 6 (lower is better)
Translates to: RLAPPHTLPRSP*HSMSHSASLTF
Trigger: GAACGTGAGCGAGGCAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS CAA 90 bp GAGTGCCTGGGGCATGGGAGGCGGAACCTGAAGGGTCTCCGCCACTaGCAAACTCTGCCAGCTGAGCTCAGCAGGCGCCCGGGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: ECLGHGRRNLKGLRH*QTLPAELSRRPGSL
Trigger: GAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGGTTCCGCCTCCCATGCCCCAGGCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS GCA 72 bp GGTAGACAGAGAGGCGGTTGGCGCCGCCGCACACGCTaGCTCGCTCGCCCTTGCACTCCATGTCGCACTCTG +
Preference number: 6 (lower is better)
Translates to: GRQRGGWRRRTR*LARPCTPCRTL
Trigger: CAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGCGTGTGCGGCGGCGCCAACCGCCTCTCTGTCTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS CCA 72 bp GCCTGGCTCTCTCTCGCTGCCTCGCCGCTGCCTCCTTaGCTGCCTTGCTCGCTCCCCTGGACTTCACGTCTC +
Preference number: 6 (lower is better)
Translates to: AWLSLAASPLPP*LPCSLPWTSRL
Trigger: GAGACGTGAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CAA 72 bp CGCCTGGCTCTCTCTCGCTGCCTCGCCGCTGCCTCCTaGGCTGCCTTGCTCGCTCCCCTGGACTTCACGTCT +
Preference number: 6 (lower is better)
Translates to: RLALSRCLAAAS*AALLAPLDFTS
Trigger: AGACGTGAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAGAGCCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS TCA 72 bp GCTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGAC +
Preference number: 6 (lower is better)
Translates to: AEGSPPLANSAS*AQQAPGVPLCD
Trigger: GTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551638.5
CDS TCA 72 bp CCTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGAC +
Preference number: 6 (lower is better)
Translates to: PEGSPPLANSAS*AQQAPGVPLCD
Trigger: GTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547525.6
ENST00000551106.1
CDS CAA 72 bp CTGCGCCTCCAGCGGGAAAGTGGGATAGTGTGCGCCTaGAATTGCAGCAGCGGCGACAGCGGTGGCCGGGGA +
Preference number: 6 (lower is better)
Translates to: LRLQRESGIVCA*NCSSGDSGGRG
Trigger: TCCCCGGCCACCGCTGTCGCCGCTGCTGCAATTCAAGGCGCACACTATCCCACTTTCCCGCTGGAGGCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000552195.5
CDS CAA 72 bp CTCTCTCGCTGCCTCGCCGCTGCCTCCTTGGCTGCCTaGCTCGCTCCCCTGGACTTCACGTCTCCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: LSRCLAAASLAA*LAPLDFTSPAL
Trigger: TAGGGCTGGAGACGTGAAGTCCAGGGGAGCGAGCAAGGCAGCCAAGGAGGCAGCGGCGAGGCAGCGAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS CAA 72 bp GGGCATGGGAGGCGGAACCTGAAGGGTCTCCGCCACTaGCAAACTCTGCCAGCTGAGCTCAGCAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: GHGRRNLKGLRH*QTLPAELSRRP
Trigger: CGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGGTTCCGCCTCCCATGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS TCA 72 bp TCTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGAC +
Preference number: 6 (lower is better)
Translates to: SEGSPPLANSAS*AQQAPGVPLCD
Trigger: GTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550529.5
CDS TCA 72 bp ACTGAAGGGTCTCCGCCACTTGCAAACTCTGCCAGCTaGGCTCAGCAGGCGCCCGGGGTCCCTCTCTGCGAC +
Preference number: 6 (lower is better)
Translates to: TEGSPPLANSAS*AQQAPGVPLCD
Trigger: GTCGCAGAGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552195.5
CDS GCA 72 bp GCTGCCTCGCTCGCCCTTGCACTCCATGTCGCACTCTaGCTCGCTCACGTTCGTCGCCTGGATCTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: AASLALALHVAL*LAHVRRLDLVA
Trigger: GGCCACAAGATCCAGGCGACGAACGTGAGCGAGGCAGAGTGCGACATGGAGTGCAAGGGCGAGCGAGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS GCA 72 bp CGCTTGGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTaGTGCAGTGGCTTTAAGGAAAGGGGAGCCTGGATT +
Preference number: 6 (lower is better)
Translates to: RLARPLCGRLPS*CSGFKERGAWI
Trigger: AATCCAGGCTCCCCTTTCCTTAAAGCCACTGCAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS CCA 72 bp TCATGGAGCGGGAATCGGGTGGTGGGAAACCCACAGTaGCAGGCGGTGCCTGCAAGAGCTGCCAGCGGGTAC +
Preference number: 6 (lower is better)
Translates to: SWSGNRVVGNPQ*QAVPARAASGY
Trigger: GTACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS GCA 72 bp GGAATCGGGTGGTGGGAAACCCACAGTGGCAGGCGGTaGCTGCAAGAGCTGCCAGCGGGTACTCCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: GIGWWETHSGRR*LQELPAGTPSQ
Trigger: CTGAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 72 bp CATCCTCTGCGCCTCCAGCGGGAAAGTGGGATAGTGTaGGCCTTGAATTGCAGCAGCGGCGACAGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: HPLRLQRESGIV*ALNCSSGDSGG
Trigger: GCCACCGCTGTCGCCGCTGCTGCAATTCAAGGCGCACACTATCCCACTTTCCCGCTGGAGGCGCAGAGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000552195.5
CDS GCA 72 bp TTGGCGCGCCCGCTCTGTGGGCGCCTTCCCAGCTGCTaGAGTGGCTTTAAGGAAAGGGGAGCCTGGATTTCC +
Preference number: 6 (lower is better)
Translates to: LARPLCGRLPSC*SGFKERGAWIS
Trigger: GGAAATCCAGGCTCCCCTTTCCTTAAAGCCACTGCAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS CAA 72 bp AGGACTCAGGGATGCCACCTGAAGGGTCTCCGCCACTaGCAAACTCTGCCAGCTGAGCTCAGCAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: RTQGCHLKGLRH*QTLPAELSRRP
Trigger: CGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGGTGGCATCCCTGAGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547525.6
CDS GCA 72 bp CTGTCACGGGTAAGGCCAGGGAAAGGTTGTCGGGCCTaGGGAAGCAGCCCCGGAACACTGCACTTCCATACC +
Preference number: 6 (lower is better)
Translates to: LSRVRPGKGCRA*GSSPGTLHFHT
Trigger: GGTATGGAAGTGCAGTGTTCCGGGGCTGCTTCCGCAGGCCCGACAACCTTTCCCTGGCCTTACCCGTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
ENST00000551638.5
CDS GCA 72 bp GGGAAACCCACAGTGGCAGGCGGTGCCTGCAAGAGCTaGCAGCGGGTACTCCTTCTCAGTGCAGAAGTCCAC +
Preference number: 6 (lower is better)
Translates to: GKPTVAGGACKS*QRVLLLSAEVH
Trigger: GTGGACTTCTGCACTGAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 72 bp GCGTCGAAGGCCTCGATCTCTTTCTGGCCGCTTTCGTaGGTCTTGATGCAGATGGTCCGTCCGCTGCGCCAG +
Preference number: 6 (lower is better)
Translates to: ASKASISFWPLS*VLMQMVRPLRQ
Trigger: CTGGCGCAGCGGACGGACCATCTGCATCAAGACGCACGAAAGCGGCCAGAAAGAGATCGAGGCCTTCGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 72 bp AGCCTGGATTTCCTTTCTCGCCACCAAGGCTCCTCCTaGCGGGCCCTGGGGCTATTTCTCCAGGTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SLDFLSRHQGSS*RALGLFLQVWL
Trigger: GAGCCAGACCTGGAGAAATAGCCCCAGGGCCCGGCAGGAGGAGCCTTGGTGGCGAGAAAGGAAATCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000552195.5
CDS CCA 72 bp GCTCATCCTCTCTGTCATGGAGCGGGAATCGGGTGGTaGGAAACCCACAGTGGCAGGCGGTGCCTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: AHPLCHGAGIGW*ETHSGRRCLQE
Trigger: CTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATGACAGAGAGGATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS CCA 72 bp GCTCAAGGGGCATCCTCTGCGCCTCCAGCGGGAAAGTaGGATAGTGTGCGCCTTGAATTGCAGCAGCGGCGA +
Preference number: 6 (lower is better)
Translates to: AQGASSAPPAGK*DSVRLELQQRR
Trigger: TCGCCGCTGCTGCAATTCAAGGCGCACACTATCCCACTTTCCCGCTGGAGGCGCAGAGGATGCCCCTTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547525.6
ENST00000550529.5
ENST00000552195.5
CDS CAA 72 bp AGCAGCCGATGTACTTGGCTGAAGGGTCTCCGCCACTaGCAAACTCTGCCAGCTGAGCTCAGCAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: SSRCTWLKGLRH*QTLPAELSRRP
Trigger: CGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGCCAAGTACATCGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551638.5
CDS TCA 72 bp GCCCTTGAACCAGGGTCCGTACCTGCGAGCAATGCTTaGGGCTTCACCTGTGTCCCGGAAACCTCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: ALEPGSVPASNA*GFTCVPETSAQ
Trigger: CTGGGCAGAGGTTTCCGGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGGTACGGACCCTGGTTCAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 72 bp TCAAACTCCTCCGCGCTGCACTTCTGGGCACAGAGCTaGTCATCCTCTCTGTCATGGAGCGGGAATCGGGTG +
Preference number: 6 (lower is better)
Translates to: SNSSALHFWAQS*SSSLSWSGNRV
Trigger: CACCCGATTCCCGCTCCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAAGTGCAGCGCGGAGGAGTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS GCA 72 bp AGGCTGACCATCCGGCCCAGCTGGACAAAGAGGTCCTaGTTCAGGTCCTCAAAGTGCACCACCAGCACCTTC +
Preference number: 6 (lower is better)
Translates to: RLTIRPSWTKRS*FRSSKCTTSTF
Trigger: GAAGGTGCTGGTGGTGCACTTTGAGGACCTGAAGCAGGACCTCTTTGTCCAGCTGGGCCGGATGGTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 72 bp CACTTCTGGGCACAGAGCTGCTCATCCTCTCTGTCATaGAGCGGGAATCGGGTGGTGGGAAACCCACAGTGG +
Preference number: 6 (lower is better)
Translates to: HFWAQSCSSSLS*SGNRVVGNPQW
Trigger: CCACTGTGGGTTTCCCACCACCCGATTCCCGCTCCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS CCA 72 bp TTGCCCTTCCAGTGGGCATGCGCAGCAAAGCCTATGTaGCCGCCGTACTTGCGGTTGAACTCAGCCATGAGG +
Preference number: 6 (lower is better)
Translates to: LPFQWACAAKPM*PPYLRLNSAMR
Trigger: CCTCATGGCTGAGTTCAACCGCAAGTACGGCGGCCACATAGGCTTTGCTGCGCATGCCCACTGGAAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 72 bp TTCCTCACGAACTCTGGCCACTCTTTGCCCTTCCAGTaGGCATGCGCAGCAAAGCCTATGTGGCCGCCGTAC +
Preference number: 6 (lower is better)
Translates to: FLTNSGHSLPFQ*ACAAKPMWPPY
Trigger: GTACGGCGGCCACATAGGCTTTGCTGCGCATGCCCACTGGAAGGGCAAAGAGTGGCCAGAGTTCGTGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS CAA 72 bp GAACACACAAGCGAACATCTGAAGGGTCTCCGCCACTaGCAAACTCTGCCAGCTGAGCTCAGCAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: EHTSEHLKGLRH*QTLPAELSRRP
Trigger: CGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGATGTTCGCTTGTGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550529.5
CDS CAA 90 bp CGCACAGGTTTCCGGCGGAAGTACCGCTGGAATTTGAACCAGAGCTaGGCCATAGTGGGATCATTCCGGACTGGCTCTCTGGGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: RTGFRRKYRWNLNQS*AIVGSFRTGSLGLG
Trigger: GCCAAGCCCCAGAGAGCCAGTCCGGAATGATCCCACTATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCGGAAACCTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS TCA 72 bp AGTAGCTGCCAGTGTAGAAGCCTGTGGCCAATTCAATaGGGTGGCGAGCCCACGTGTTGCCAGCACCTGGGA +
Preference number: 6 (lower is better)
Translates to: SSCQCRSLWPIQ*GGEPTCCQHLG
Trigger: TCCCAGGTGCTGGCAACACGTGGGCTCGCCACCTCATTGAATTGGCCACAGGCTTCTACACTGGCAGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS TCA 72 bp AGGGGTCATACTCGAGCTTCCGGAGCCCTGAGCGCTTaGAGTTGCCATCCTTCTGGCTCTCCACACAGAGCA +
Preference number: 6 (lower is better)
Translates to: RGHTRASGALSA*SCHPSGSPHRA
Trigger: TGCTCTGTGTGGAGAGCCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCCGGAAGCTCGAGTATGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS TCA 72 bp CGCAGTATAGGGGTCATACTCGAGCTTCCGGAGCCCTaGGCGCTTGAAGTTGCCATCCTTCTGGCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: RSIGVILELPEP*ALEVAILLALH
Trigger: GTGGAGAGCCAGAAGGATGGCAACTTCAAGCGCTCAGGGCTCCGGAAGCTCGAGTATGACCCCTATACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS GCA 72 bp GAGGCTTCACCTGTGTCCCGGAAACCTCTGCCCAGATaGATGTCACCCAAGAAGGACAGCTCAGCACCCTCA +
Preference number: 6 (lower is better)
Translates to: EASPVSRKPLPR*MSPKKDSSAPS
Trigger: TGAGGGTGCTGAGCTGTCCTTCTTGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACACAGGTGAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CCA 72 bp CCCCAGCTGAAGACCAAGCTTGGCCTTTCTACCTCATaGGAACAGAAGCTGGTGGGCCTCCATCCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: PQLKTKLGLSTS*EQKLVGLHPVR
Trigger: CCTGACTGGATGGAGGCCCACCAGCTTCTGTTCCCATGAGGTAGAAAGGCCAAGCTTGGTCTTCAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551057.5
ENST00000551106.1
ENST00000551734.1
CDS CAA 72 bp TCCCAGTCTACCCTCCCCCTGTGTGGACGCATCATCTaGGGTAGTAGTCATCGGGGACACCCGTTAGGTTCC +
Preference number: 6 (lower is better)
Translates to: SQSTLPLCGRII*GSSHRGHPLGS
Trigger: GGAACCTAACGGGTGTCCCCGATGACTACTACCCAAGATGATGCGTCCACACAGGGGGAGGGTAGACTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS TCA 72 bp CACACAAGCGAACATCTCCACCTCCTGATGTCCTGGTaGTACAGCAGCTGGGTGCATGCAGCACTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: HTSEHLHLLMSW*YSSWVHAALPD
Trigger: GTCTGGGAGTGCTGCATGCACCCAGCTGCTGTATCACCAGGACATCAGGAGGTGGAGATGTTCGCTTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000551057.5
CDS TCA 72 bp CAAGGCCAGAAGGGGAGGGCAAGTTCAATGCTTGGCTaGGGCCATGAGAAAGGATGGAGCTTACCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: QGQKGRASSMLG*GHEKGWSLPAL
Trigger: GAGGGCTGGTAAGCTCCATCCTTTCTCATGGCCTCAGCCAAGCATTGAACTTGCCCTCCCCTTCTGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS TCA 72 bp TGGAGAACATCACATGAGCCAGTGTACGTGATGTCCTaGGAAGAGTGCCTGGGGCATGGGAGGCGGAACCTG +
Preference number: 6 (lower is better)
Translates to: WRTSHEPVYVMS*EECLGHGRRNL
Trigger: CAGGTTCCGCCTCCCATGCCCCAGGCACTCTTCTCAGGACATCACGTACACTGGCTCATGTGATGTTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS CAA 72 bp TCGCCAAGCTTGGCTCTCTCATTCCCATCCTTGCCCTaGAACCAGGGTCCGTACCTGCGAGCAATGCTTGAG +
Preference number: 6 (lower is better)
Translates to: SPSLALSFPSLP*NQGPYLRAMLE
Trigger: CTCAAGCATTGCTCGCAGGTACGGACCCTGGTTCAAGGGCAAGGATGGGAATGAGAGAGCCAAGCTTGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CAA 72 bp ACCTCAGTAGACTATAAACTGAAGGGTCTCCGCCACTaGCAAACTCTGCCAGCTGAGCTCAGCAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: TSVDYKLKGLRH*QTLPAELSRRP
Trigger: CGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGTTTATAGTCTACTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552195.5
CDS TCA 72 bp GAAGGGGAGGGCAAGTTCAATGCTTGGCTGAGGCCATaGGAAAGGATGGAGCTTACCAGCCCTCCCAAACTG +
Preference number: 6 (lower is better)
Translates to: EGEGKFNAWLRP*ERMELTSPPKL
Trigger: CAGTTTGGGAGGGCTGGTAAGCTCCATCCTTTCTCATGGCCTCAGCCAAGCATTGAACTTGCCCTCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
CDS GCA 72 bp CAATGCTTGAGGCTTCACCTGTGTCCCGGAAACCTCTaGCCAGATGCATGTCACCCAAGAAGGACAGCTCAG +
Preference number: 6 (lower is better)
Translates to: QCLRLHLCPGNL*PDACHPRRTAQ
Trigger: CTGAGCTGTCCTTCTTGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACACAGGTGAAGCCTCAAGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000547525.6
ENST00000549903.1
CDS CAA 72 bp GCTTGGCTGGGGTGCTTGGGAGAGGATGGAAGGGGCTaGGTTTCCCAAGCTTTCCTTAGGGATGGAACACTT +
Preference number: 6 (lower is better)
Translates to: AWLGCLGEDGRG*VSQAFLRDGTL
Trigger: AAGTGTTCCATCCCTAAGGAAAGCTTGGGAAACCAAGCCCCTTCCATCCTCTCCCAAGCACCCCAGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS CAA 72 bp AAGCGCACAGGTTTCCGGCGGAAGTACCGCTGGAATTaGAACCAGAGCTTGGCCATAGTGGGATCATTCCGG +
Preference number: 6 (lower is better)
Translates to: KRTGFRRKYRWN*NQSLAIVGSFR
Trigger: CCGGAATGATCCCACTATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCGGAAACCTGTGCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS TCA 72 bp CCATCCAGTCAGGCATCAGGACTCAGGGATGCCACCTaGAGCAATCCCTTGCGAATTTTGATGTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: PSSQASGLRDAT*SNPLRILMSGS
Trigger: GCTCCCAGACATCAAAATTCGCAAGGGATTGCTTCAGGTGGCATCCCTGAGTCCTGATGCCTGACTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000550529.5
CDS CCA 72 bp GCTTACCAGCCCTCCCAAACTGAAGGTGAGCTTCTTTaGGCCAACAAGGGGGTTTTGAGGCTCAGAACACAC +
Preference number: 6 (lower is better)
Translates to: AYQPSQTEGELL*ANKGVLRLRTH
Trigger: GTGTGTTCTGAGCCTCAAAACCCCCTTGTTGGCCCAAAGAAGCTCACCTTCAGTTTGGGAGGGCTGGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
CDS CCA 72 bp GAAGCTGGCCAAAGCAATGAGCTGCTTGGACTTGCCTaGCAGGAACCTTCTGTCCATGCAACGGTTGTCTTG +
Preference number: 6 (lower is better)
Translates to: EAGQSNELLGLA*QEPSVHATVVL
Trigger: CAAGACAACCGTTGCATGGACAGAAGGTTCCTGCCAGGCAAGTCCAAGCAGCTCATTGCTTTGGCCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332082.8
ENST00000546629.1
ENST00000547525.6
ENST00000549903.1
CDS CAA 90 bp GAAAAAGTGATCACCAAGGCCAGAAGGGGAGGGCAAGTTCAATGCTaGGCTGAGGCCATGAGAAAGGATGGAGCTTACCAGCCCTCCCAA +
Preference number: 6 (lower is better)
Translates to: EKVITKARRGGQVQC*AEAMRKDGAYQPSQ
Trigger: TTGGGAGGGCTGGTAAGCTCCATCCTTTCTCATGGCCTCAGCCAAGCATTGAACTTGCCCTCCCCTTCTGGCCTTGGTGATCACTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS CAA 90 bp AAGGTAAAGAAGCGCACAGGTTTCCGGCGGAAGTACCGCTGGAATTaGAACCAGAGCTTGGCCATAGTGGGATCATTCCGGACTGGCTCT +
Preference number: 6 (lower is better)
Translates to: KVKKRTGFRRKYRWN*NQSLAIVGSFRTGS
Trigger: AGAGCCAGTCCGGAATGATCCCACTATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCGGAAACCTGTGCGCTTCTTTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS TCA 72 bp GGGATGCCACCTCTTAGGGTTGTGGAGAACATCACATaGGCCAGTGTACGTGATGTCCTGAGAAGAGTGCCT +
Preference number: 6 (lower is better)
Translates to: GMPPLRVVENIT*ASVRDVLRRVP
Trigger: AGGCACTCTTCTCAGGACATCACGTACACTGGCTCATGTGATGTTCTCCACAACCCTAAGAGGTGGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551106.1
CDS TCA 72 bp TCAGTAGACTATAAACTCCACCTCCTGATGTCCTGGTaGTACAGCAGCTGGGTGCATGCAGCACTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: SVDYKLHLLMSW*YSSWVHAALPD
Trigger: GTCTGGGAGTGCTGCATGCACCCAGCTGCTGTATCACCAGGACATCAGGAGGTGGAGTTTATAGTCTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551734.1
CDS GCA 72 bp AGCACTTGGAGAAGGTTTCTGAGGGTTACCAGCAGCTaGAGTTCACTTCTTGCCCTTTCTCTGCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: STWRRFLRVTSS*SSLLALSLLLR
Trigger: CCTGAGGAGCAGAGAAAGGGCAAGAAGTGAACTGCAGCTGCTGGTAACCCTCAGAAACCTTCTCCAAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551106.1
ENST00000551734.1
CDS CCA 72 bp AATGGATCTGGGTTATTTCACTGGGGGCCTTGTTTCTaGCCTCTTCCCCAGCTGAAGACCAAGCTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: NGSGLFHWGPCF*PLPQLKTKLGL
Trigger: AAGGCCAAGCTTGGTCTTCAGCTGGGGAAGAGGCCAGAAACAAGGCCCCCAGTGAAATAACCCAGATCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
ENST00000550529.5
ENST00000551057.5
ENST00000551106.1
ENST00000551734.1
CDS CCA 72 bp GTAAAGAAGCGCACAGGTTTCCGGCGGAAGTACCGCTaGAATTTGAACCAGAGCTTGGCCATAGTGGGATCA +
Preference number: 6 (lower is better)
Translates to: VKKRTGFRRKYR*NLNQSLAIVGS
Trigger: TGATCCCACTATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCGGAAACCTGTGCGCTTCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000547525.6
CDS CAA 72 bp CGAAATAAGATTTGCAAAGATCCTGGTACGGCTCCTTaGCCCTTCCAGTGGGCATGCGCAGCAAAGCCTATG +
Preference number: 6 (lower is better)
Translates to: RNKICKDPGTAP*PFQWACAAKPM
Trigger: CATAGGCTTTGCTGCGCATGCCCACTGGAAGGGCAAAGGAGCCGTACCAGGATCTTTGCAAATCTTATTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS CCA 72 bp TCAAGTTGTAGCTGTTGCAGAATAACCACCTGGGTTTaGGCAGTGGAGAACACACAAGCGAACATCTCCACC +
Preference number: 6 (lower is better)
Translates to: SSCSCCRITTWV*AVENTQANIST
Trigger: GGTGGAGATGTTCGCTTGTGTGTTCTCCACTGCCCAAACCCAGGTGGTTATTCTGCAACAGCTACAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000551057.5
CDS TCA 72 bp CAAGGTTGCTGTAGTCACAACTTCCCCAGTACAGTTTaGGCATTCCTGCTGCTCCAAATCCACACCAACACT +
Preference number: 6 (lower is better)
Translates to: QGCCSHNFPSTV*AFLLLQIHTNT
Trigger: AGTGTTGGTGTGGATTTGGAGCAGCAGGAATGCTCAAACTGTACTGGGGAAGTTGTGACTACAGCAACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS GCA 72 bp CCTACAGATGCTGTGCAAATCGAGCGAAATAAGATTTaGAAAGATCCTGGTACGGCTCCTTTGCCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: PTDAVQIERNKI*KDPGTAPLPFQ
Trigger: CTGGAAGGGCAAAGGAGCCGTACCAGGATCTTTGCAAATCTTATTTCGCTCGATTTGCACAGCATCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS GCA 72 bp ATCTGGTTGTCTGAGGGGTTTCTCCAGCACCTTGAATaGTTTTTGTGCTTGTGTGGTTGGCAGGCAAGACAT +
Preference number: 6 (lower is better)
Translates to: IWLSEGFLQHLE*FLCLCGWQARH
Trigger: ATGTCTTGCCTGCCAACCACACAAGCACAAAAAGCATTCAAGGTGCTGGAGAAACCCCTCAGACAACCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS CAA 72 bp TTGTCTGAGGGGTTTCTCCAGCACCTTGAATGCTTTTaGTGCTTGTGTGGTTGGCAGGCAAGACATGCTAGA +
Preference number: 6 (lower is better)
Translates to: LSEGFLQHLECF*CLCGWQARHAR
Trigger: TCTAGCATGTCTTGCCTGCCAACCACACAAGCACAAAAAGCATTCAAGGTGCTGGAGAAACCCCTCAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS CAA 72 bp TGTTCATCTGGTTGTCTGAGGGGTTTCTCCAGCACCTaGAATGCTTTTTGTGCTTGTGTGGTTGGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: CSSGCLRGFSST*NAFCACVVGRQ
Trigger: TTGCCTGCCAACCACACAAGCACAAAAAGCATTCAAGGTGCTGGAGAAACCCCTCAGACAACCAGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS CAA 90 bp CCCTCCCAAACTGAAGGTGAGCTTCTTTGGGCCAACAAGGGGGTTTaGAGGCTCAGAACACACATAAGTTGGTCCCATTTTCCTACATAT +
Preference number: 6 (lower is better)
Translates to: PSQTEGELLWANKGV*RLRTHISWSHFPTY
Trigger: ATATGTAGGAAAATGGGACCAACTTATGTGTGTTCTGAGCCTCAAAACCCCCTTGTTGGCCCAAAGAAGCTCACCTTCAGTTTGGGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000546401.1
ENST00000547525.6
CDS GCA 72 bp TCCTCACGAACTCTGGCCACTCTCCTACAGATGCTGTaGAAATCGAGCGAAATAAGATTTGCAAAGATCCTG +
Preference number: 6 (lower is better)
Translates to: SSRTLATLLQML*KSSEIRFAKIL
Trigger: CAGGATCTTTGCAAATCTTATTTCGCTCGATTTGCACAGCATCTGTAGGAGAGTGGCCAGAGTTCGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549903.1
CDS CCA 72 bp TCTTACTCAAGTTGTAGCTGTTGCAGAATAACCACCTaGGTTTGGGCAGTGGAGAACACACAAGCGAACATC +
Preference number: 6 (lower is better)
Translates to: SYSSCSCCRITT*VWAVENTQANI
Trigger: GATGTTCGCTTGTGTGTTCTCCACTGCCCAAACCCAGGTGGTTATTCTGCAACAGCTACAACTTGAGTAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332082.8
ENST00000550529.5
ENST00000551057.5
CDS CAA 72 bp GAGGGGTTTCTCCAGCACCTTGAATGCTTTTTGTGCTaGTGTGGTTGGCAGGCAAGACATGCTAGAATATTA +
Preference number: 6 (lower is better)
Translates to: EGFLQHLECFLC*CGWQARHARIL
Trigger: TAATATTCTAGCATGTCTTGCCTGCCAACCACACAAGCACAAAAAGCATTCAAGGTGCTGGAGAAACCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS TCA 72 bp AGAATATTAACATTTGGAAGCAGCTGCAAATATGACTaGTGGGAGTTGGTGTATAAATGCCCCAGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: RILTFGSSCKYD*WELVYKCPSSL
Trigger: AAGGGAGCTGGGGCATTTATACACCAACTCCCATCAGTCATATTTGCAGCTGCTTCCAAATGTTAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS CCA 72 bp AATGGGGATTTGATTTCAGTCTGTTTGACTCCGGGATaGAAACTCTTAATCCAGCTGTTTAATCACCTCAGT +
Preference number: 6 (lower is better)
Translates to: NGDLISVCLTPG*KLLIQLFNHLS
Trigger: ACTGAGGTGATTAAACAGCTGGATTAAGAGTTTCCATCCCGGAGTCAAACAGACTGAAATCAAATCCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551057.5
ENST00000551734.1
ENST00000552195.5
CDS CAA 72 bp ATTCCTGCTGCTCCAAATCCACACCAACACTTAATGTaGTCAGTCCTTTCCTTTTTGGTCAGTTTGGTAGAT +
Preference number: 6 (lower is better)
Translates to: IPAAPNPHQHLM*SVLSFLVSLVD
Trigger: ATCTACCAAACTGACCAAAAAGGAAAGGACTGACAACATTAAGTGTTGGTGTGGATTTGGAGCAGCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546811.1
CDS TCA 72 bp TCAGGGATGCCACCTGAAGCAATCCCTTGCGAATTTTaGTGTCTGGGAGCCAAAATAAATTATTCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: SGMPPEAIPCEF*CLGAKINYSLF
Trigger: AAAAAGAGAATAATTTATTTTGGCTCCCAGACATCAAAATTCGCAAGGGATTGCTTCAGGTGGCATCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332082.8
ENST00000550529.5