RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WSCD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179314

Ensembl transcript IDs: ENST00000317744.10, ENST00000317744.9, ENST00000539421.1, ENST00000571494.1, ENST00000571973.1, ENST00000572764.1, ENST00000573634.5, ENST00000574232.5, ENST00000574946.5, ENST00000576083.5, ENST00000576233.1, ENST00000576947.1

Found 726 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATACTCCCTaGGCAGCCCCGTCCAGTTGTGGTCACGCAGGGCTTGGTCCACCG +
Preference number: 1 (lower is better)
Translates to: GAAAWARPIIWAHTP*AAPSSCGHAGLGPP
Trigger: CGGTGGACCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CCA 90 bp TTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTaGGCACATACTCCCTGGGCAGCCCCGTCCAGTTGTGGTCACGCA +
Preference number: 1 (lower is better)
Translates to: LRHSAGAAAWARPII*AHTPWAAPSSCGHA
Trigger: TGCGTGACCACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CCA 90 bp GCAGCTCTACTGGGCCTTCCACCCCCGGCCTGTGCTCATAGCGGGTaGCTCTGGGTTCCCCATCATCAGGCTAGGAAGCAGAGGGTCAGG +
Preference number: 1 (lower is better)
Translates to: AALLGLPPPACAHSG*LWVPHHQARKQRVR
Trigger: CCTGACCCTCTGCTTCCTAGCCTGATGATGGGGAACCCAGAGCCACCCGCTATGAGCACAGGCCGGGGGTGGAAGGCCCAGTAGAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp CTGAAGGGCTGCCTGAGTTCAGGCCCACCCACCTTCCCACCTCCCTaGCCTCCACAGAGGCCAGTGTGCAACCGGATCGCCACAATCCTC +
Preference number: 1 (lower is better)
Translates to: LKGCLSSGPPTFPPP*PPQRPVCNRIATIL
Trigger: GAGGATTGTGGCGATCCGGTTGCACACTGGCCTCTGTGGAGGTCAGGGAGGTGGGAAGGTGGGTGGGCCTGAACTCAGGCAGCCCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 90 bp CCAGCCTCCAGGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCACGT +
Preference number: 1 (lower is better)
Translates to: PASRSTRPGTCVLRL*VAAFVSGGAWHTPR
Trigger: ACGTGGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCCTGGAGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CCA 90 bp ACTGAAGGTTGGAGGAAGCTTCCATCTGGGGAAGGGCAGCTCTACTaGGCCTTCCACCCCCGGCCTGTGCTCATAGCGGGTGGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: TEGWRKLPSGEGQLY*AFHPRPVLIAGGSG
Trigger: CCCAGAGCCACCCGCTATGAGCACAGGCCGGGGGTGGAAGGCCCAGTAGAGCTGCCCTTCCCCAGATGGAAGCTTCCTCCAACCTTCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp TTCTCCTCCCAATGCAGCTTGGCTCAGGCTGAAGGGAGGTCTCCCTaGCAGCTGACCCAGAGCAGGACCATGGGGCCTGGCCAGGGTTAT +
Preference number: 1 (lower is better)
Translates to: FSSQCSLAQAEGRSP*QLTQSRTMGPGQGY
Trigger: ATAACCCTGGCCAGGCCCCATGGTCCTGCTCTGGGTCAGCTGTCAGGGAGACCTCCCTTCAGCCTGAGCCAAGCTGCATTGGGAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp CCACGGTCACATTGGCCTGTATCAGGGAGCTGGGGAAGGCATGTGTaGTGTTCTCTGGCAGTCGGAAGCATCCGCGGTAGGTGGCGGTCC +
Preference number: 1 (lower is better)
Translates to: PRSHWPVSGSWGRHV*CSLAVGSIRGRWRS
Trigger: GGACCGCCACCTACCGCGGATGCTTCCGACTGCCAGAGAACATCACACATGCCTTCCCCAGCTCCCTGATACAGGCCAATGTGACCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR GCA 90 bp ACCTCCACAGAGGCCAGTGTGCAACCGGATCGCCACAATCCTCCCTaGATCTCGGCCACCTTGAGCGTTGCTCCTGGGTTGCACTCCTAC +
Preference number: 1 (lower is better)
Translates to: TSTEASVQPDRHNPP*ISATLSVAPGLHSY
Trigger: GTAGGAGTGCAACCCAGGAGCAACGCTCAAGGTGGCCGAGATGCAGGGAGGATTGTGGCGATCCGGTTGCACACTGGCCTCTGTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 90 bp CTACTGGGCCTTCCACCCCCGGCCTGTGCTCATAGCGGGTGGCTCTaGGTTCCCCATCATCAGGCTAGGAAGCAGAGGGTCAGGATATCT +
Preference number: 1 (lower is better)
Translates to: LLGLPPPACAHSGWL*VPHHQARKQRVRIS
Trigger: AGATATCCTGACCCTCTGCTTCCTAGCCTGATGATGGGGAACCCAGAGCCACCCGCTATGAGCACAGGCCGGGGGTGGAAGGCCCAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp GAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTaGCGAGCAAGTCTATGCCAGGGCTACACACAGGAAGCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: EHKCLPGPASQSRTP*RASLCQGYTQEAQG
Trigger: GCCCTGGGCTTCCTGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR TCA 90 bp GGCCTCCACAGCCTCACTTGTGAGCCCAAGATGTGTAGCATACATTaGCCCCCATCCCAGGCTGGCAGGACCAGACCTAGGGGTCAGGCT +
Preference number: 1 (lower is better)
Translates to: GLHSLTCEPKMCSIH*PPSQAGRTRPRGQA
Trigger: AGCCTGACCCCTAGGTCTGGTCCTGCCAGCCTGGGATGGGGGTCAATGTATGCTACACATCTTGGGCTCACAAGTGAGGCTGTGGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 90 bp CACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTaGCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGG +
Preference number: 1 (lower is better)
Translates to: HLCVTSVRGCICIWG*LAHPTWVASLHQDG
Trigger: CCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CCA 90 bp GCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTaGGGGTGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAA +
Preference number: 1 (lower is better)
Translates to: AWHLCVTSVRGCICI*GCLAHPTWVASLHQ
Trigger: TTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CCA 90 bp GCTGCGGAGTTTGTGGTGCCCGTAGTCACACCACACACACATTTATaGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGC +
Preference number: 1 (lower is better)
Translates to: AAEFVVPVVTPHTHL*DVRHTARAAHPGSS
Trigger: GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACCACAAACTCCGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 90 bp TCCAACTACCAGGAAAAGCCTGGTGCTGTTGCTCTCCCCAGACCCTaGCTCCAGTCCCGGTCACTCCTCTCTCCACACTTTGCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: SNYQEKPGAVALPRP*LQSRSLLSPHFALP
Trigger: GGGAAGGGCAAAGTGTGGAGAGAGGAGTGACCGGGACTGGAGCCAGGGTCTGGGGAGAGCAACAGCACCAGGCTTTTCCTGGTAGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 90 bp CCCACCTCCATCCCAATGGTCCTTGCTGCTCAGAGCATAAATGTCTaGCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTC +
Preference number: 1 (lower is better)
Translates to: PTSIPMVLAAQSINV*PAQHPRVEHPDEQV
Trigger: GACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATTGGGATGGAGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CCA 90 bp CCCACTGCCACGCCTGACATTGCTTTCAAGGATCTAGGCTTGCTCTaGGATGCAGGTCTGCCCTGGCTATCCCGTCCACAGCAGTGTGGA +
Preference number: 1 (lower is better)
Translates to: PTATPDIAFKDLGLL*DAGLPWLSRPQQCG
Trigger: TCCACACTGCTGTGGACGGGATAGCCAGGGCAGACCTGCATCCCAGAGCAAGCCTAGATCCTTGAAAGCAATGTCAGGCGTGGCAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 90 bp GGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTaGTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGA +
Preference number: 1 (lower is better)
Translates to: GSSSLCAHLHPNGPC*SEHKCLPGPASQSR
Trigger: TCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR GCA 90 bp GATCTCCCACGTAGGCAGACCTGGGATGAAGGCTGTGAGGACCACTaGCAGCTGACAGGGCCGTTGCTCTTCCTTGCTCATCAACATCCA +
Preference number: 1 (lower is better)
Translates to: DLPRRQTWDEGCEDH*QLTGPLLFLAHQHP
Trigger: TGGATGTTGATGAGCAAGGAAGAGCAACGGCCCTGTCAGCTGGCAGTGGTCCTCACAGCCTTCATCCCAGGTCTGCCTACGTGGGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 90 bp CACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTaGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTG +
Preference number: 1 (lower is better)
Translates to: HTFMGCQTHGQGRTP*KQQSLCPPPSQWSL
Trigger: CAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR TCA 90 bp ACACTTTGCCCTTCCCAGCCTCCATGGCTTCCCCACTGCCACGCCTaGCATTGCTTTCAAGGATCTAGGCTTGCTCTGGGATGCAGGTCT +
Preference number: 1 (lower is better)
Translates to: TLCPSQPPWLPHCHA*HCFQGSRLALGCRS
Trigger: AGACCTGCATCCCAGAGCAAGCCTAGATCCTTGAAAGCAATGTCAGGCGTGGCAGTGGGGAAGCCATGGAGGCTGGGAAGGGCAAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp TGTGGGTTCGTGGCCAGGTATGTGTGTCCATTTGTGTTCGCCTTGTaGTGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: CGFVARYVCPFVFAL*CVSVVSRSPCAGGS
Trigger: GCTGCCTCCCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATGGACACACATACCTGGCCACGAACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR TCA 90 bp TGTGGGTTCGTGGCCAGGTATGTGTGTCCATTTGTGTTCGCCTTGTaGTGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGCCTGAGC +
Preference number: 1 (lower is better)
Translates to: CGFVARYVCPFVFAL*CVSVVSRSPCAGLS
Trigger: GCTCAGGCCCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATGGACACACATACCTGGCCACGAACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539421.1
3UTR TCA 90 bp AGTTGCGGTCAGCTGCATATCCCAGGTGCCCGGCACATTTTCTGTTaGATTCTGCCACCAGGGACCTGTATGGGTTCCGGATTAGCAGGA +
Preference number: 1 (lower is better)
Translates to: SCGQLHIPGARHIFC*ILPPGTCMGSGLAG
Trigger: TCCTGCTAATCCGGAACCCATACAGGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCAGCTGACCGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR GCA 90 bp GGCCACTCTTTGCTCTTCCAGTTGCGGTCAGCTGCATATCCCAGGTaGCCGGCACATTTTCTGTTGAATTCTGCCACCAGGGACCTGTAT +
Preference number: 1 (lower is better)
Translates to: GHSLLFQLRSAAYPR*PAHFLLNSATRDLY
Trigger: ATACAGGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCAGCTGACCGCAACTGGAAGAGCAAAGAGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR TCA 90 bp CATCCAGGAGTACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTaGCTCAGCGTAAACTGGATGGACACTGACCCCATCACTCTACTT +
Preference number: 1 (lower is better)
Translates to: HPGVPAKCQVSCCMD*LSVNWMDTDPITLL
Trigger: AAGTAGAGTGATGGGGTCAGTGTCCATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGTACTCCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp TGCTCTACCTGGAGAGAGATGACATCTCTGGGTACCTGGCAGCAGTaGATGTACCAATCCAACTACCAGGAAAAGCCTGGTGCTGTTGCT +
Preference number: 1 (lower is better)
Translates to: CSTWREMTSLGTWQQ*MYQSNYQEKPGAVA
Trigger: AGCAACAGCACCAGGCTTTTCCTGGTAGTTGGATTGGTACATTCACTGCTGCCAGGTACCCAGAGATGTCATCTCTCTCCAGGTAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp GGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATGGACACTaGCCCCATCACTCTACTTGCCTGCACTCTTCACTGAGGTACAGA +
Preference number: 1 (lower is better)
Translates to: GVLLYGLTQRKLDGH*PHHSTCLHSSLRYR
Trigger: TCTGTACCTCAGTGAAGAGTGCAGGCAAGTAGAGTGATGGGGTCAGTGTCCATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 90 bp TTCCGAGCAAGTCAGCAGAAAACAAACCTGTGTCCCAAGAATTCTTaGAGTCGTAACATCAACCTCAGCACTTCTCCTCTCCTCTTGGGG +
Preference number: 1 (lower is better)
Translates to: FRASQQKTNLCPKNS*SRNINLSTSPLLLG
Trigger: CCCCAAGAGGAGAGGAGAAGTGCTGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCTGACTTGCTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 90 bp GATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCACCCCTaGAGAGGCTCTGGCAGATCATATGAATTCCCAAACAGAAATGGG +
Preference number: 1 (lower is better)
Translates to: DGRCHWLSPGHVFHP*RGSGRSYEFPNRNG
Trigger: CCCATTTCTGTTTGGGAATTCATATGATCTGCCAGAGCCTCTCCAGGGGTGGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 90 bp TCTCTGTTCTGTTCTAACCGGTTCCTGATGCATTTGCCACACTTCTaGCCTACATACAGATCAGCTTTTATTCCTTGGCTGGTTGGGAGA +
Preference number: 1 (lower is better)
Translates to: SLFCSNRFLMHLPHF*PTYRSAFIPWLVGR
Trigger: TCTCCCAACCAGCCAAGGAATAAAAGCTGATCTGTATGTAGGGCAGAAGTGTGGCAAATGCATCAGGAACCGGTTAGAACAGAACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 90 bp ACACTTCTGCCCTACATACAGATCAGCTTTTATTCCTTGGCTGGTTaGGAGAGTATCCTCTTTACTGAGAAGCTAAGAGCTGTAGATGAG +
Preference number: 1 (lower is better)
Translates to: TLLPYIQISFYSLAG*ESILFTEKLRAVDE
Trigger: CTCATCTACAGCTCTTAGCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAAGGAATAAAAGCTGATCTGTATGTAGGGCAGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp ATAAACATTTTCAAAGACCTTGGTGTTTCTAGCTTTGAGCTGAACTaGGTTGATGCTATGGGAGGGTCAAGAACAGCTTCGCATCAGTGT +
Preference number: 1 (lower is better)
Translates to: INIFKDLGVSSFELN*VDAMGGSRTASHQC
Trigger: ACACTGATGCGAAGCTGTTCTTGACCCTCCCATAGCATCAACTCAGTTCAGCTCAAAGCTAGAAACACCAAGGTCTTTGAAAATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 90 bp CACTCTACTTTATCCCCACCTTGTTCAGACCAACTCACCCAATATTaGGTGGTGATAAATAGGAAGTCAGACGAATCAATTTCTCCCTAT +
Preference number: 1 (lower is better)
Translates to: HSTLSPPCSDQLTQY*VVINRKSDESISPY
Trigger: ATAGGGAGAAATTGATTCGTCTGACTTCCTATTTATCACCACTCAATATTGGGTGAGTTGGTCTGAACAAGGTGGGGATAAAGTAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp GAGGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTGAGGCCACGGGCCTaGGCATCAGAGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: EATGLSIRVGSAAPWCDCVRPRA*ASEWGA
Trigger: CGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTCAC...GCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp TTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATCCATCTCCCGTAACGTaGGCACCAGGCTGCGCCGCA +
Preference number: 2 (lower is better)
Translates to: LRHSAGAAAWARPIIWAHPSPVT*APGCAA
Trigger: TGCGGCGCAGCCTGGTGCCCACGTTACGGGAGATGG...ATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR GCA 90 bp GCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: ARAAHPGSSSLCAHLHPNAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...ATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp TTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATTTCCTGGAGCCCGGCTaGAGCTCGTCCACACGGTAC +
Preference number: 2 (lower is better)
Translates to: LRHSAGAAAWARPIIWAHFLEPG*SSSTRY
Trigger: GTACCGTGTGGACGAGCTGCAGCCGGGCTCCAGGAA...ATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR CCA 90 bp ACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCGGGAGCGCAGCCCCGTaGTGCGATTGCGTCACTCAG +
Preference number: 2 (lower is better)
Translates to: TARAAHPGSSSLCAHLHPGSAAP*CDCVTQ
Trigger: CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC...GGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR TCA 90 bp GGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCGTGAGGCCACGGGCCTaGGCATCAGAGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: GRTPWKQQSLCPPPSQWSVRPRA*ASEWGA
Trigger: CGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTCAC...GGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR TCA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCACCGTTCGTCCCAGTaGGGCCACGGGCCTGAGCAT +
Preference number: 2 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSIHRSSQ*GHGPEH
Trigger: ATGCTCAGGCCCGTGGCCTCACTGGGACGAACGGTG...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR TCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTCTCCTTGTGCGGGCCTaGGCATCAGAGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPLLVRA*ASEWGA
Trigger: CGCTCCCCACTCTGATGCTCAGGCCCGCACAAGGAG...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539421.1
3UTR-3UTR GCA 90 bp CCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: PHTHLWDVRHTARAAHPGAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...TCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp GCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATAGCGCAGCCCCGTGGTaGGATTGCGTCACTCAGCGG +
Preference number: 2 (lower is better)
Translates to: ARAAHPGSSSLCAHLHPNSAAPW*DCVTQR
Trigger: CCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT...ATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAAAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp ACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCCAGGAGCACACGGCCTaGCACCTGTGTGTTACGTCT +
Preference number: 2 (lower is better)
Translates to: TARAAHPGSSSLCAHLHPQEHTA*HLCVTS
Trigger: AGACGTAACACACAGGTGCCAGGCCGTGTGCTCCTG...GGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGTCCAGGTCTCCTTGTaGGGGAGGCAGCACCAGGGT +
Preference number: 2 (lower is better)
Translates to: SARPSIPESNTLTSKSMPVQVSL*GRQHQG
Trigger: ACCCTGGTGCTGCCTCCCGCACAAGGAGACCTGGAC...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTAGTCCAGGTCTCCTTGTaGGGGAGGCAGCACCAGGGT +
Preference number: 2 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLVQVSL*GRQHQG
Trigger: ACCCTGGTGCTGCCTCCCGCACAAGGAGACCTGGAC...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGGGAGCGCAGCCCCGTaGTGCGATTGCGTCACTCAG +
Preference number: 2 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFGSAAP*CDCVTQ
Trigger: CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR TCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCACCGTTCGTCCCAGTaGGGCCACGGGCCTGAGCAT +
Preference number: 2 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIHRSSQ*GHGPEH
Trigger: ATGCTCAGGCCCGTGGCCTCACTGGGACGAACGGTG...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR TCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGTCCTGGCCACATACTaGGCTGTCCATGGCATCCCG +
Preference number: 2 (lower is better)
Translates to: SARPSIPESNTLTSKSMPVLATY*AVHGIP
Trigger: CGGGATGCCATGGACAGCTCAGTATGTGGCCAGGAC...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR GCA 90 bp ATAGCGGGTGGCTCTGGGTTCCCCATCATCAGGCTAGGAAGCAGAGGGTCAGGATGGAACTTCAGCTCCTaGCCTCTTCCCCACGCCCCC +
Preference number: 2 (lower is better)
Translates to: IAGGSGFPIIRLGSRGSGWNFSS*PLPHAP
Trigger: GGGGGCGTGGGGAAGAGGGCAGGAGCTGAAGTTCCA...TCCTGACCCTCTGCTTCCTAGCCTGATGATGGGGAACCCAGAGCCACCCGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp TGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGCTGGCACACCCCACGTaGGTGGCTTCTCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: CPAQHPRVEHPDEQVYARLAHPT*VASLHQ
Trigger: TTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAG...CCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CAA 90 bp CACAATCCTCCCTGCATCTCGGCCACCTTGAGCGTTGCTCCTGGGTaGCACTCCTACCCTCCATACTTGAACCTCCTGGCCTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: HNPPCISATLSVAPG*HSYPPYLNLLASTA
Trigger: GGCTGTGGAGGCCAGGAGGTTCAAGTATGGAGGGTAGGAGTGCAACCCAGGAGCAACGCTCAAGGTGGCCGAGATGCAGGGAGGATTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CAA 90 bp GGCTTCCCCACTGCCACGCCTGACATTGCTTTCAAGGATCTAGGCTaGCTCTGGGATGCAGGTCTGCCCTGGCTATCCCGTCCACAGCAG +
Preference number: 2 (lower is better)
Translates to: GFPTATPDIAFKDLG*LWDAGLPWLSRPQQ
Trigger: CTGCTGTGGACGGGATAGCCAGGGCAGACCTGCATCCCAGAGCAAGCCTAGATCCTTGAAAGCAATGTCAGGCGTGGCAGTGGGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTGTCCAGGTCTCCTTGTaGGGGAGGCAGCACCAGGGT +
Preference number: 2 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAAVQVSL*GRQHQG
Trigger: ACCCTGGTGCTGCCTCCCGCACAAGGAGACCTGGAC...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp TGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCAACGTCTGTGCGTGGCTaGATTTGTATCTGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: CQTHGQGRTPWKQQSLCPTSVRG*ICIWGC
Trigger: GCACCCCCAGATACAAATGCAGCCACGCACAGACGT...TGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTGGGAGCGCAGCCCCGTaGTGCGATTGCGTCACTCAG +
Preference number: 2 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSGSAAP*CDCVTQ
Trigger: CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp TTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTGGCTGCATTTGTATCTaGGGGTGCCTGGCACACCCC +
Preference number: 2 (lower is better)
Translates to: LWDVRHTARAAHPGSSSLGCICI*GCLAHP
Trigger: GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCC...AAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCGGCTGCATTTGTATCTaGGGGTGCCTGGCACACCCC +
Preference number: 2 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPGCICI*GCLAHP
Trigger: GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCC...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTCACACCCCACGTGGGTaGCTTCTCTGCATCAAGACG +
Preference number: 2 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFHTPRG*LLCIKT
Trigger: CGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTG...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CAA 90 bp GCCACCTTGAGCGTTGCTCCTGGGTTGCACTCCTACCCTCCATACTaGAACCTCCTGGCCTCCACAGCCTCACTTGTGAGCCCAAGATGT +
Preference number: 2 (lower is better)
Translates to: ATLSVAPGLHSYPPY*NLLASTASLVSPRC
Trigger: ACATCTTGGGCTCACAAGTGAGGCTGTGGAGGCCAGGAGGTTCAAGTATGGAGGGTAGGAGTGCAACCCAGGAGCAACGCTCAAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CAA 90 bp CACATACTCCCTGGGCAGCCCCGTCCAGTTGTGGTCACGCAGGGCTaGGTCCACCGTCCGGATGTAGCCATTGATCAAGTCTTTCATCTC +
Preference number: 2 (lower is better)
Translates to: HILPGQPRPVVVTQG*VHRPDVAIDQVFHL
Trigger: GAGATGAAAGACTTGATCAATGGCTACATCCGGACGGTGGACCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCCCAGGGAGTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR GCA 90 bp ACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATGGCAGTCCTCAACCCTaGCCATGGTGCAGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: TCQVPGVLLYGLTQRKLDGSPQP*PWCSQP
Trigger: GGGCTGGCTGCACCATGGGCAGGGTTGAGGACTGCC...ATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTCTGGCACACCCCACGTaGGTGGCTTCTCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAALAHPT*VASLHQ
Trigger: TTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAG...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp GGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTGTTACGTCTGTGCGTaGCTGCATTTGTATCTGGGG +
Preference number: 2 (lower is better)
Translates to: GRTPWKQQSLCPPPSQWSCYVCA*LHLYLG
Trigger: CCCCAGATACAAATGCAGCCACGCACAGACGTAACA...GGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCAGGAGCACACGGCCTaGCACCTGTGTGTTACGTCT +
Preference number: 2 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHQEHTA*HLCVTS
Trigger: AGACGTAACACACAGGTGCCAGGCCGTGTGCTCCTG...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACCCACCTCCATCCCAATaGTCCTTGCTGCTCAGAGCA +
Preference number: 2 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDPPPSQ*SLLLRA
Trigger: TGCTCTGAGCAGCAAGGACCATTGGGATGGAGGTGG...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGCTTGAGCGTTGCTCCTaGGTTGCACTCCTACCCTCC +
Preference number: 2 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLLERCS*VALLPS
Trigger: GGAGGGTAGGAGTGCAACCCAGGAGCAACGCTCAAG...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp ACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATCCTTCCCAGCCTCCATaGCTTCCCCACTGCCACGCC +
Preference number: 2 (lower is better)
Translates to: TCQVPGVLLYGLTQRKLDPSQPP*LPHCHA
Trigger: GGCGTGGCAGTGGGGAAGCCATGGAGGCTGGGAAGG...ATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGAAGGCATGTGTaGTGTTCTCTGGCAGTCGGA +
Preference number: 2 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIWGRHV*CSLAVG
Trigger: TCCGACTGCCAGAGAACATCACACATGCCTTCCCCA...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR TCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGGTCCTTTTCGCCCTTaGACCCTTTGTTGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDGPFRP*TLCCRG
Trigger: CCCTCTACAACAAAGGGTTCAAGGGCGAAAAGGACC...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR GCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTACGTCTGTGCGTGGCTaGATTTGTATCTGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAATSVRG*ICIWGC
Trigger: GCACCCCCAGATACAAATGCAGCCACGCACAGACGT...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGGAGGTGTGGGTTCGTaGCCAGGTATGTGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLAGGVGS*PGMCVH
Trigger: ATGGACACACATACCTGGCCACGAACCCACACCTCC...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACTTGAGCGTTGCTCCTaGGTTGCACTCCTACCCTCC +
Preference number: 2 (lower is better)
Translates to: VVTPHTHLWDVRHTARAALERCS*VALLPS
Trigger: GGAGGGTAGGAGTGCAACCCAGGAGCAACGCTCAAG...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CAA 90 bp TTGATGCTATGGGAGGGTCAAGAACAGCTTCGCATCAGTGTGGGTTaGGGGGAATCCCAGGAAGGATTTGGAGGCCACCAGGGGCACAGA +
Preference number: 2 (lower is better)
Translates to: LMLWEGQEQLRISVG*GESQEGFGGHQGHR
Trigger: TCTGTGCCCCTGGTGGCCTCCAAATCCTTCCTGGGATTCCCCCAAACCCACACTGATGCGAAGCTGTTCTTGACCCTCCCATAGCATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CAA 90 bp CAGTTGCGGTCAGCTGCATATCCCAGGTGCCCGGCACATTTTCTGTaGAATTCTGCCACCAGGGACCTGTATGGGTTCCGGATTAGCAGG +
Preference number: 2 (lower is better)
Translates to: QLRSAAYPRCPAHFL*NSATRDLYGFRISR
Trigger: CCTGCTAATCCGGAACCCATACAGGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCAGCTGACCGCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR TCA 90 bp TGCATATCCCAGGTGCCCGGCACATTTTCTGTTGAATTCTGCCACCAGGGACCTAGCATTCCCAGCCCCTaGGAATGGCCAAGGGGAACT +
Preference number: 2 (lower is better)
Translates to: CISQVPGTFSVEFCHQGPSIPSP*EWPRGT
Trigger: AGTTCCCCTTGGCCATTCTCAGGGGCTGGGAATGCT...AGGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR TCA 90 bp TGCATATCCCAGGTGCCCGGCACATTTTCTGTTGAATTCTGCCACCAGGGACCTCACTCTCGTGGGTTTTaGCACAGATGGTGCGTCGGC +
Preference number: 2 (lower is better)
Translates to: CISQVPGTFSVEFCHQGPHSRGF*HRWCVG
Trigger: GCCGACGCACCATCTGTGTCAAAACCCACGAGAGTG...AGGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR GCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACAACGTCTGTGCGTGGCTaGATTTGTATCTGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTTSVRG*ICIWGC
Trigger: GCACCCCCAGATACAAATGCAGCCACGCACAGACGT...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp ACAGACACGTTGAGGAAGGCCACCATCTCCCGTAACGTGGGCACCAGGCTGCGCTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCT +
Preference number: 2 (lower is better)
Translates to: TDTLRKATISRNVGTRLRCVLRL*VAAFVS
Trigger: AGATACAAATGCAGCCACGCACAGACGTAACACACA...GCGCAGCCTGGTGCCCACGTTACGGGAGATGGTGGCCTTCCTCAACGTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR GCA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTTCTGGGATGCAGGTCTaGCCTGGCTATCCCGTCCAC +
Preference number: 2 (lower is better)
Translates to: TCLHSSLRYRVIYKATGASGMQV*PGYPVH
Trigger: GTGGACGGGATAGCCAGGGCAGACCTGCATCCCAGA...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAAGCCCTTCTCGCCTTTaGACTCATGGTTACACTCTT +
Preference number: 2 (lower is better)
Translates to: SARPSIPESNTLTSKSMPSPSRL*THGYTL
Trigger: AAGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCT...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR GCA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGAGTCCGGCCACTCTTTaGTCTTCCAGTTGCGGTCAG +
Preference number: 2 (lower is better)
Translates to: FSASRRGYEPGVVSECLRSPATL*SSSCGQ
Trigger: CTGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACT...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR CCA 90 bp AGTCCCCACGGTCACATTGGCCTGTATCAGGGAGCTGGGGAAGGCATGTGTGATTCGCCTTTGCACTCATaGTTACACTCTTCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: SPHGHIGLYQGAGEGMCDSPLHS*LHSSSP
Trigger: GGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGCGA...ATCACACATGCCTTCCCCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CAA 90 bp GGCTATCCCGTCCACAGCAGTGTGGAAACTCCTGAGGGGTCTCAATaGCTCCTGATACTAGGAAGAAATAGCTCCATCAGGGGCCTTCGC +
Preference number: 2 (lower is better)
Translates to: GYPVHSSVETPEGSQ*LLILGRNSSIRGLR
Trigger: GCGAAGGCCCCTGATGGAGCTATTTCTTCCTAGTATCAGGAGCAATTGAGACCCCTCAGGAGTTTCCACACTGCTGTGGACGGGATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTTTGTGTTCGCCTTGTaGTGTGTGTCTGTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPFVFAL*CVSVVS
Trigger: GGACACAACAGACACACATCACAAGGCGAACACAAA...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR TCA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTCCTACCCTCCATACTTaGACCTCCTGGCCTCCACAG +
Preference number: 2 (lower is better)
Translates to: TCLHSSLRYRVIYKATGAPTLHT*TSWPPQ
Trigger: CTGTGGAGGCCAGGAGGTTCAAGTATGGAGGGTAGG...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp ATAGCGGGTGGCTCTGGGTTCCCCATCATCAGGCTAGGAAGCAGAGGGTCAGGACCCAATGGTCCTTGCTaGTCAGAGCATAAATGTCTG +
Preference number: 2 (lower is better)
Translates to: IAGGSGFPIIRLGSRGSGPNGPC*SEHKCL
Trigger: CAGACATTTATGCTCTGAGCAGCAAGGACCATTGGG...TCCTGACCCTCTGCTTCCTAGCCTGATGATGGGGAACCCAGAGCCACCCGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCCCCAATGGTCCTTGCTaGTCAGAGCATAAATGTCTG +
Preference number: 2 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPPNGPC*SEHKCL
Trigger: CAGACATTTATGCTCTGAGCAGCAAGGACCATTGGG...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCGGCAGTCCTCAACCCTaGCCATGGTGCAGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSGSPQP*PWCSQP
Trigger: GGGCTGGCTGCACCATGGGCAGGGTTGAGGACTGCC...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp ACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATGGCCACCTTGAGCGTTaGTCCTGGGTTGCACTCCTA +
Preference number: 2 (lower is better)
Translates to: TCQVPGVLLYGLTQRKLDGHLER*SWVALL
Trigger: TAGGAGTGCAACCCAGGAGCAACGCTCAAGGTGGCC...ATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCAAGGGGAACTCTTTCTaGGAACAAAAGCCCGAGCAA +
Preference number: 2 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCKGNSF*EQKPEQ
Trigger: TTGCTCGGGCTTTTGTTCCCAGAAAGAGTTCCCCTT...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR TCA 90 bp ACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATCAGAGTCGAACACCCTaGCGAGCAAGTCTATGCCAG +
Preference number: 2 (lower is better)
Translates to: TCQVPGVLLYGLTQRKLDQSRTP*RASLCQ
Trigger: CTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTG...ATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTATGTGTAGCATACATTaGCCCCCATCCCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: TCLHSSLRYRVIYKATGAMCSIH*PPSQAG
Trigger: GCCAGCCTGGGATGGGGGTCAATGTATGCTACACAT...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp TTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCT +
Preference number: 2 (lower is better)
Translates to: LWDVRHTARAAHPGSSSLCVLRL*VAAFVS
Trigger: AGATACAAATGCAGCCACGCACAGACGTAACACACA...AAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCT +
Preference number: 2 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAACVLRL*VAAFVS
Trigger: AGATACAAATGCAGCCACGCACAGACGTAACACACA...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp GATGGGAAACTGAGACTGGAGATGGGAAAAGCTTTGTCCAAGATGGCAGATAAGTCTGGGATGCAGGTCTaGCCTGGCTATCCCGTCCAC +
Preference number: 2 (lower is better)
Translates to: DGKLRLEMGKALSKMADKSGMQV*PGYPVH
Trigger: GTGGACGGGATAGCCAGGGCAGACCTGCATCCCAGA...CTTATCTGCCATCTTGGACAAAGCTTTTCCCATCTCCAGTCTCAGTTTCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp ACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATAGCTTTGAGCTGAACTaGGTTGATGCTATGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TCQVPGVLLYGLTQRKLDSFELN*VDAMGG
Trigger: CCCTCCCATAGCATCAACTCAGTTCAGCTCAAAGCT...ATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGCATCCCAATGGTCCTTaGTGCTCAGAGCATAAATGT +
Preference number: 2 (lower is better)
Translates to: FSASRRGYEPGVVSECLRHPNGP*CSEHKC
Trigger: ACATTTATGCTCTGAGCAGCAAGGACCATTGGGATG...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR GCA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCATTCCCCACGCCCCCATaGTTACACCTTGCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: MNPFGVITFQIPPMGFRAFPTPP*LHLASG
Trigger: CCCAGAAGCAAGGTGTAAGCATGGGGGCGTGGGGAA...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCCCAGGAAAAGCCTGGTaGTGTTGCTCTCCCCAGACC +
Preference number: 2 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSPGKAW*CCSPQT
Trigger: GGTCTGGGGAGAGCAACAGCACCAGGCTTTTCCTGG...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp GATGGGAAACTGAGACTGGAGATGGGAAAAGCTTTGTCCAAGATGGCAGATAAGCTGGCACACCCCACGTaGGTGGCTTCTCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: DGKLRLEMGKALSKMADKLAHPT*VASLHQ
Trigger: TTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAG...CTTATCTGCCATCTTGGACAAAGCTTTTCCCATCTCCAGTCTCAGTTTCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp CTCCTGATACTAGGAAGAAATAGCTCCATCAGGGGCCTTCGCAGATTGGATGCCTGTTACGTCTGTGCGTaGCTGCATTTGTATCTGGGG +
Preference number: 2 (lower is better)
Translates to: LLILGRNSSIRGLRRLDACYVCA*LHLYLG
Trigger: CCCCAGATACAAATGCAGCCACGCACAGACGTAACA...GGCATCCAATCTGCGAAGGCCCCTGATGGAGCTATTTCTTCCTAGTATCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCAGGTCCTGGGCTCCCCTaGAACTTCAGCTCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSGPGLP*NFSSCP
Trigger: AGGGCAGGAGCTGAAGTTCCAGGGGAGCCCAGGACC...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCAATGTGTAGCATACATTaGCCCCCATCCCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: MNPFGVITFQIPPMGFRAMCSIH*PPSQAG
Trigger: GCCAGCCTGGGATGGGGGTCAATGTATGCTACACAT...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCACTTGAGGTCAGTGTCTaGATTGGCTTGGGCGGGGTG +
Preference number: 2 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSLEVSV*IGLGGV
Trigger: CACCCCGCCCAAGCCAATGCAGACACTGACCTCAAG...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp CTTCTACCCAGCATTCCCATAAGTCTTGAAATTCCCTCTGGCTTCATTGTCTTAATCCCAGGAAGGATTTaGAGGCCACCAGGGGCACAG +
Preference number: 2 (lower is better)
Translates to: LLPSIPISLEIPSGFIVLIPGRI*RPPGAQ
Trigger: CTGTGCCCCTGGTGGCCTCCAAATCCTTCCTGGGAT...TAAGACAATGAAGCCAGAGGGAATTTCAAGACTTATGGGAATGCTGGGTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp TTGGCTGGTTGGGAGAGTATCCTCTTTACTGAGAAGCTAAGAGCTGTAGATGAGGGTACCTGGCAGCAGTaGATGTACCAATCCAACTAC +
Preference number: 2 (lower is better)
Translates to: LAGWESILFTEKLRAVDEGTWQQ*MYQSNY
Trigger: GTAGTTGGATTGGTACATTCACTGCTGCCAGGTACC...CTCATCTACAGCTCTTAGCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR GCA 90 bp TTGGCTGGTTGGGAGAGTATCCTCTTTACTGAGAAGCTAAGAGCTGTAGATGAGACAAATGGACTTTCCTaGAAGCACAGACAGATCCCC +
Preference number: 2 (lower is better)
Translates to: LAGWESILFTEKLRAVDETNGLS*KHRQIP
Trigger: GGGGATCTGTCTGTGCTTGCAGGAAAGTCCATTTGT...CTCATCTACAGCTCTTAGCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCTTCAGATACCTCCAATaGGTTTCCGAGCAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSFRYLQ*VSEQVS
Trigger: GCTGACTTGCTCGGAAACCCATTGGAGGTATCTGAA...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CAA 90 bp ACAGTCAGGGTTTCTCTGTTCTGTTCTAACCGGTTCCTGATGCATTaGCCACACTTCTGCCCTACATACAGATCAGCTTTTATTCCTTGG +
Preference number: 2 (lower is better)
Translates to: TVRVSLFCSNRFLMH*PHFCPTYRSAFIPW
Trigger: CCAAGGAATAAAAGCTGATCTGTATGTAGGGCAGAAGTGTGGCAAATGCATCAGGAACCGGTTAGAACAGAACAGAGAAACCCTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCAAAACTGGATGGACACTaGCCCCATCACTCTACTTGC +
Preference number: 2 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSKLDGH*PHHSTC
Trigger: GCAAGTAGAGTGATGGGGTCAGTGTCCATCCAGTTT...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCGCTAAGAGCTGTAGATaGGACCTAACTTGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSAKSCR*DLTWRK
Trigger: TTTTCTCCAAGTTAGGTCTCATCTACAGCTCTTAGC...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCAATGCCGAAGCTATCCTaGGCCAATAAACATTTTCAA +
Preference number: 2 (lower is better)
Translates to: MNPFGVITFQIPPMGFRAMPKLS*ANKHFQ
Trigger: TTGAAAATGTTTATTGGCTCAGGATAGCTTCGGCAT...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR TCA 90 bp CTTCTACCCAGCATTCCCATAAGTCTTGAAATTCCCTCTGGCTTCATTGTCTTACTCCCTATAGTGAAATaGACCCCTTTGGAGTCATCA +
Preference number: 2 (lower is better)
Translates to: LLPSIPISLEIPSGFIVLLPIVK*TPLESS
Trigger: TGATGACTCCAAAGGGGTTCATTTCACTATAGGGAG...TAAGACAATGAAGCCAGAGGGAATTTCAAGACTTATGGGAATGCTGGGTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCATATTCCTTGGCTGGTTaGGAGAGTATCCTCTTTACT +
Preference number: 2 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSYSLAG*ESILFT
Trigger: AGTAAAGAGGATACTCTCCCAACCAGCCAAGGAATA...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCATCATTTACACATCACTaGGACTACCAGGATGTGTTT +
Preference number: 2 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSSFTHH*DYQDVF
Trigger: AAACACATCCTGGTAGTCCCAGTGATGTGTAAATGA...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 72 bp CAGGGTCGTGGGAGCGCCGGCCGCGCCGCCGGAAGCTaGCCTCCTTGTTGTTCTCCACGCAGAGCAGCCGCT +
Preference number: 3 (lower is better)
Translates to: QGRGSAGRAAGS*PPCCSPRRAAA
Trigger: AGCGGCTGCTCTGCGTGGAGAACAACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR CAA 90 bp CACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCAGCCCCGTGGTGCGATaGCGTCACTCAGCGGGGGCG +
Preference number: 3 (lower is better)
Translates to: HGQGRTPWKQQSLCPPPSSPVVR*RHSAGA
Trigger: CGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT...GGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CCA 72 bp TCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTaGGCACATACTCCCTGGGCAGCCCCGTCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: SAGAAAWARPII*AHTPWAAPSSC
Trigger: ACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR GCA 72 bp GGAAGGCCACCATCTCCCGTAACGTGGGCACCAGGCTaGGCCGCAGCTCCTCGTAGTGCACCACCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: GRPPSPVTWAPG*AAAPRSAPPAA
Trigger: GGCTGCTGGTGGTGCACTACGAGGAGCTGCGGCGCAGCCTGGTGCCCACGTTACGGGAGATGGTGGCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CCA 72 bp GTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTaGGCCAGGCCTATCATCTGGGCACATACTCCCTGG +
Preference number: 3 (lower is better)
Translates to: VVRLRHSAGAAA*ARPIIWAHTPW
Trigger: CCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CCA 72 bp GCGTGGGCCAGGCCTATCATCTGGGCACATACTCCCTaGGCAGCCCCGTCCAGTTGTGGTCACGCAGGGCTT +
Preference number: 3 (lower is better)
Translates to: AWARPIIWAHTP*AAPSSCGHAGL
Trigger: AAGCCCTGCGTGACCACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR CAA 90 bp TTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTAGCCCCGTGGTGCGATaGCGTCACTCAGCGGGGGCG +
Preference number: 3 (lower is better)
Translates to: LWDVRHTARAAHPGSSSLSPVVR*RHSAGA
Trigger: CGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT...AAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CAA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACAGCCCCGTGGTGCGATaGCGTCACTCAGCGGGGGCG +
Preference number: 3 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHSPVVR*RHSAGA
Trigger: CGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CAA 90 bp TGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCATGTGTCCAGGTCTCCTaGTGCGGGAGGCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: CQTHGQGRTPWKQQSLCPCVQVS*CGRQHQ
Trigger: CTGGTGCTGCCTCCCGCACAAGGAGACCTGGACACA...TGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR GCA 72 bp ACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTaGATTTGTATCTGGGGGTGCCTGGCACACCCCACG +
Preference number: 3 (lower is better)
Translates to: TAWHLCVTSVRG*ICIWGCLAHPT
Trigger: CGTGGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR GCA 72 bp GGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTaGCCACCTCCATCCCAATGGTCCTTGCTGCTCAGA +
Preference number: 3 (lower is better)
Translates to: GQGRTPWKQQSL*PPPSQWSLLLR
Trigger: TCTGAGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR GCA 72 bp GAGGCCAGTGTGCAACCGGATCGCCACAATCCTCCCTaGATCTCGGCCACCTTGAGCGTTGCTCCTGGGTTG +
Preference number: 3 (lower is better)
Translates to: EASVQPDRHNPP*ISATLSVAPGL
Trigger: CAACCCAGGAGCAACGCTCAAGGTGGCCGAGATGCAGGGAGGATTGTGGCGATCCGGTTGCACACTGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 72 bp GCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTaGCTGCATTTGTATCTGGGGGTGCCTGGCACACCC +
Preference number: 3 (lower is better)
Translates to: AHGLAPVCYVCA*LHLYLGVPGTP
Trigger: GGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CAA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCTGTGTCCAGGTCTCCTaGTGCGGGAGGCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPCVQVS*CGRQHQ
Trigger: CTGGTGCTGCCTCCCGCACAAGGAGACCTGGACACA...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317744.9
ENST00000571494.1
ENST00000574946.5
3UTR GCA 72 bp AGGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCTGGGGGTGCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: RSTRPGTCVLRL*VAAFVSGGAWH
Trigger: GTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR CCA 72 bp ATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTaGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAA +
Preference number: 3 (lower is better)
Translates to: MGCQTHGQGRTP*KQQSLCPPPSQ
Trigger: TTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR TCA 72 bp TGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTaGCGAGCAAGTCTATGCCAGGGCTACACACAGGAA +
Preference number: 3 (lower is better)
Translates to: CLPGPASQSRTP*RASLCQGYTQE
Trigger: TTCCTGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR GCA 72 bp CGTAGGCAGACCTGGGATGAAGGCTGTGAGGACCACTaGCAGCTGACAGGGCCGTTGCTCTTCCTTGCTCAT +
Preference number: 3 (lower is better)
Translates to: RRQTWDEGCEDH*QLTGPLLFLAH
Trigger: ATGAGCAAGGAAGAGCAACGGCCCTGTCAGCTGGCAGTGGTCCTCACAGCCTTCATCCCAGGTCTGCCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTGTCCCCACGGTCACATaGGCCTGTATCAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSVPTVT*ACIREL
Trigger: CAGCTCCCTGATACAGGCCAATGTGACCGTGGGGAC...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR TCA 72 bp CATTGGCCTGTATCAGGGAGCTGGGGAAGGCATGTGTaGTGTTCTCTGGCAGTCGGAAGCATCCGCGGTAGG +
Preference number: 3 (lower is better)
Translates to: HWPVSGSWGRHV*CSLAVGSIRGR
Trigger: CCTACCGCGGATGCTTCCGACTGCCAGAGAACATCACACATGCCTTCCCCAGCTCCCTGATACAGGCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR GCA 72 bp GTACCAATCCAACTACCAGGAAAAGCCTGGTGCTGTTaGTCTCCCCAGACCCTGGCTCCAGTCCCGGTCACT +
Preference number: 3 (lower is better)
Translates to: VPIQLPGKAWCC*SPQTLAPVPVT
Trigger: AGTGACCGGGACTGGAGCCAGGGTCTGGGGAGAGCAACAGCACCAGGCTTTTCCTGGTAGTTGGATTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp TGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGGTATGTGTGTCCATTaGTGTTCGCCTTGTGATGTG +
Preference number: 3 (lower is better)
Translates to: CPAQHPRVEHPDEQVYARGMCVH*CSPCDV
Trigger: CACATCACAAGGCGAACACAAATGGACACACATACC...CCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CAA 90 bp GAGCAAGTCCCCACGGTCACATTGGCCTGTATCAGGGAGCTGGGGAAGGCATGTGAGCCCTTCTCGCCTTaGCACTCATGGTTACACTCT +
Preference number: 3 (lower is better)
Translates to: EQVPTVTLACIRELGKACEPFSP*HSWLHS
Trigger: AGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCTC...ACATGCCTTCCCCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGACTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR CAA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGAAGCTGCCCTCCTTGTaGTTCTCCACGCAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: FSASRRGYEPGVVSECLRKLPSL*FSTQSS
Trigger: GCTGCTCTGCGTGGAGAACAACAAGGAGGGCAGCTT...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR GCA 72 bp ATCCCAATGGTCCTTGCTGCTCAGAGCATAAATGTCTaGCCGGCCCAGCATCCCAGAGTCGAACACCCTGAC +
Preference number: 3 (lower is better)
Translates to: IPMVLAAQSINV*PAQHPRVEHPD
Trigger: GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR GCA 72 bp AGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTaGTCAGAGCATAAATGTCTGCCCGGCCCAGCATCC +
Preference number: 3 (lower is better)
Translates to: SLCAHLHPNGPC*SEHKCLPGPAS
Trigger: GGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR GCA 72 bp GTCTTGCACAGGTGTCTGGTAGACCTCACAGTATTCTaGCAGCCTCTGTGCCTCAGGGTCCTGGCCACATAC +
Preference number: 3 (lower is better)
Translates to: VLHRCLVDLTVF*QPLCLRVLATY
Trigger: GTATGTGGCCAGGACCCTGAGGCACAGAGGCTGGCAGAATACTGTGAGGTCTACCAGACACCTGTGCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CCA 72 bp TTTGTGGTGCCCGTAGTCACACCACACACACATTTATaGGATGTCAGACACACGGCCAGGGCCGCACACCCT +
Preference number: 3 (lower is better)
Translates to: FVVPVVTPHTHL*DVRHTARAAHP
Trigger: AGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CAA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCTGTGATGTGTGTCTGTaGTGTCCAGGTCTCCTTGTG +
Preference number: 3 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPCDVCL*CPGLLV
Trigger: CACAAGGAGACCTGGACACAACAGACACACATCACA...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CAA 90 bp TTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGATGTGTGTCTGTaGTGTCCAGGTCTCCTTGTG +
Preference number: 3 (lower is better)
Translates to: LWDVRHTARAAHPGSSSLCDVCL*CPGLLV
Trigger: CACAAGGAGACCTGGACACAACAGACACACATCACA...AAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR-3UTR CAA 90 bp GTGGTCACGCAGGGCTTGGTCCACCGTCCGGATGTAGCCATTGATCAAGTCTTTAAGTCCGGCCACTCTTaGCTCTTCCAGTTGCGGTCA +
Preference number: 3 (lower is better)
Translates to: VVTQGLVHRPDVAIDQVFKSGHS*LFQLRS
Trigger: TGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACTT...AAAGACTTGATCAATGGCTACATCCGGACGGTGGACCAAGCCCTGCGTGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR TCA 72 bp CCTCTCAACTCTCCCTTCAGTGGTGTCAGCTTCACGTaGTTCCTGGTCATGATCCCAAGGCCCAAGGTGGTC +
Preference number: 3 (lower is better)
Translates to: PLNSPFSGVSFT*FLVMIPRPKVV
Trigger: GACCACCTTGGGCCTTGGGATCATGACCAGGAATCACGTGAAGCTGACACCACTGAAGGGAGAGTTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 72 bp CAGCTGCATATCCCAGGTGCCCGGCACATTTTCTGTTaGATTCTGCCACCAGGGACCTGTATGGGTTCCGGA +
Preference number: 3 (lower is better)
Translates to: QLHIPGARHIFC*ILPPGTCMGSG
Trigger: TCCGGAACCCATACAGGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR GCA 72 bp GTCCGGCCACTCTTTGCTCTTCCAGTTGCGGTCAGCTaGATATCCCAGGTGCCCGGCACATTTTCTGTTGAA +
Preference number: 3 (lower is better)
Translates to: VRPLFALPVAVS*ISQVPGTFSVE
Trigger: TTCAACAGAAAATGTGCCGGGCACCTGGGATATGCAGCTGACCGCAACTGGAAGAGCAAAGAGTGGCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR-3UTR CAA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGTTGGTGTGGCTGGTCTaGAGGTCAGTGTCTGCATTG +
Preference number: 3 (lower is better)
Translates to: FSASRRGYEPGVVSECLRLVWLV*RSVSAL
Trigger: CAATGCAGACACTGACCTCAAGACCAGCCACACCAA...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 72 bp GTACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTaGCTCAGCGTAAACTGGATGGACACTGACCCCATC +
Preference number: 3 (lower is better)
Translates to: VPAKCQVSCCMD*LSVNWMDTDPI
Trigger: GATGGGGTCAGTGTCCATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 72 bp TTGCTCTTCCAGTTGCGGTCAGCTGCATATCCCAGGTaGCCGGCACATTTTCTGTTGAATTCTGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: LLFQLRSAAYPR*PAHFLLNSATR
Trigger: CCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCAGCTGACCGCAACTGGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CCA 72 bp CCACCAGGGACCTGTATGGGTTCCGGATTAGCAGGATaGCTGAATCAAACATCTCAATCTCCCTCCTGCCAC +
Preference number: 3 (lower is better)
Translates to: PPGTCMGSGLAG*LNQTSQSPSCH
Trigger: GTGGCAGGAGGGAGATTGAGATGTTTGATTCAGCCATCCTGCTAATCCGGAACCCATACAGGTCCCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR TCA 72 bp GTGGCCAGGTATGTGTGTCCATTTGTGTTCGCCTTGTaGTGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCG +
Preference number: 3 (lower is better)
Translates to: VARYVCPFVFAL*CVSVVSRSPCA
Trigger: CGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATGGACACACATACCTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317744.9
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
3UTR TCA 72 bp CCCTGGCTATCCCGTCCACAGCAGTGTGGAAACTCCTaGGGGGTCTCAATTGCTCCTGATACTAGGAAGAAA +
Preference number: 3 (lower is better)
Translates to: PWLSRPQQCGNS*GVSIAPDTRKK
Trigger: TTTCTTCCTAGTATCAGGAGCAATTGAGACCCCTCAGGAGTTTCCACACTGCTGTGGACGGGATAGCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCCGCATCAGTGTGGGTTaGGGGGAATCCCAGGAAGGA +
Preference number: 3 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSRISVG*GESQEG
Trigger: TCCTTCCTGGGATTCCCCCAAACCCACACTGATGCG...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 72 bp CTGTATGGACTGACTCAGCGTAAACTGGATGGACACTaGCCCCATCACTCTACTTGCCTGCACTCTTCACTG +
Preference number: 3 (lower is better)
Translates to: LYGLTQRKLDGH*PHHSTCLHSSL
Trigger: CAGTGAAGAGTGCAGGCAAGTAGAGTGATGGGGTCAGTGTCCATCCAGTTTACGCTGAGTCAGTCCATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 72 bp CCCAGTCACCATAGCTGGAAAGATGGAAGGTGTCATTaGCTTAGTCCAGGACATGTATTCCACCCCTGGAGA +
Preference number: 3 (lower is better)
Translates to: PSHHSWKDGRCH*LSPGHVFHPWR
Trigger: TCTCCAGGGGTGGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGTGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTGGTATGTGTGTCCATTaGTGTTCGCCTTGTGATGTG +
Preference number: 3 (lower is better)
Translates to: TCLHSSLRYRVIYKATGAGMCVH*CSPCDV
Trigger: CACATCACAAGGCGAACACAAATGGACACACATACC...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp GATGGGAAACTGAGACTGGAGATGGGAAAAGCTTTGTCCAAGATGGCAGATAAGCAGCTGACAGGGCCGTaGCTCTTCCTTGCTCATCAA +
Preference number: 3 (lower is better)
Translates to: DGKLRLEMGKALSKMADKQLTGP*LFLAHQ
Trigger: TTGATGAGCAAGGAAGAGCAACGGCCCTGTCAGCTG...CTTATCTGCCATCTTGGACAAAGCTTTTCCCATCTCCAGTCTCAGTTTCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCAACCCCATCACTCTACTaGCCTGCACTCTTCACTGAG +
Preference number: 3 (lower is better)
Translates to: MNPFGVITFQIPPMGFRATPSLY*PALFTE
Trigger: CTCAGTGAAGAGTGCAGGCAAGTAGAGTGATGGGGT...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 72 bp ATGGGAAAAGCTTTGTCCAAGATGGCAGATAAGAGCTaGGACTACAACCTGGCCTTTCAGTCTGACGACTCT +
Preference number: 3 (lower is better)
Translates to: MGKALSKMADKS*DYNLAFQSDDS
Trigger: AGAGTCGTCAGACTGAAAGGCCAGGTTGTAGTCCCAGCTCTTATCTGCCATCTTGGACAAAGCTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 72 bp TGTCATTGGCTTAGTCCAGGACATGTATTCCACCCCTaGAGAGGCTCTGGCAGATCATATGAATTCCCAAAC +
Preference number: 3 (lower is better)
Translates to: CHWLSPGHVFHP*RGSGRSYEFPN
Trigger: GTTTGGGAATTCATATGATCTGCCAGAGCCTCTCCAGGGGTGGAATACATGTCCTGGACTAAGCCAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp CTTCTACCCAGCATTCCCATAAGTCTTGAAATTCCCTCTGGCTTCATTGTCTTAACTTCTCCTCTCCTCTaGGGGCCCCCTAAGAACCAA +
Preference number: 3 (lower is better)
Translates to: LLPSIPISLEIPSGFIVLTSPLL*GPPKNQ
Trigger: TTGGTTCTTAGGGGGCCCCAAGAGGAGAGGAGAAGT...TAAGACAATGAAGCCAGAGGGAATTTCAAGACTTATGGGAATGCTGGGTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp TTGGCTGGTTGGGAGAGTATCCTCTTTACTGAGAAGCTAAGAGCTGTAGATGAGGGTATGTGTGTCCATTaGTGTTCGCCTTGTGATGTG +
Preference number: 3 (lower is better)
Translates to: LAGWESILFTEKLRAVDEGMCVH*CSPCDV
Trigger: CACATCACAAGGCGAACACAAATGGACACACATACC...CTCATCTACAGCTCTTAGCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 72 bp TCAGGGGCCTTCGCAGATTGGATGCCGAAGCTATCCTaGGCCAATAAACATTTTCAAAGACCTTGGTGTTTC +
Preference number: 3 (lower is better)
Translates to: SGAFADWMPKLS*ANKHFQRPWCF
Trigger: GAAACACCAAGGTCTTTGAAAATGTTTATTGGCTCAGGATAGCTTCGGCATCCAATCTGCGAAGGCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 72 bp TTCAAAGACCTTGGTGTTTCTAGCTTTGAGCTGAACTaGGTTGATGCTATGGGAGGGTCAAGAACAGCTTCG +
Preference number: 3 (lower is better)
Translates to: FKDLGVSSFELN*VDAMGGSRTAS
Trigger: CGAAGCTGTTCTTGACCCTCCCATAGCATCAACTCAGTTCAGCTCAAAGCTAGAAACACCAAGGTCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 72 bp CACTTCTGCCCTACATACAGATCAGCTTTTATTCCTTaGCTGGTTGGGAGAGTATCCTCTTTACTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: HFCPTYRSAFIP*LVGRVSSLLRS
Trigger: GCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAAGGAATAAAAGCTGATCTGTATGTAGGGCAGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 72 bp ACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATaGGTTTCCGAGCAAGTCAGCAGAAAACAAACCTGT +
Preference number: 3 (lower is better)
Translates to: TPLESSHFRYLQ*VSEQVSRKQTC
Trigger: ACAGGTTTGTTTTCTGCTGACTTGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CCA 72 bp CCCTACATACAGATCAGCTTTTATTCCTTGGCTGGTTaGGAGAGTATCCTCTTTACTGAGAAGCTAAGAGCT +
Preference number: 3 (lower is better)
Translates to: PYIQISFYSLAG*ESILFTEKLRA
Trigger: AGCTCTTAGCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAAGGAATAAAAGCTGATCTGTATGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 72 bp ACATTTTCAAAGACCTTGGTGTTTCTAGCTTTGAGCTaGACTGAGTTGATGCTATGGGAGGGTCAAGAACAG +
Preference number: 3 (lower is better)
Translates to: TFSKTLVFLALS*TELMLWEGQEQ
Trigger: CTGTTCTTGACCCTCCCATAGCATCAACTCAGTTCAGCTCAAAGCTAGAAACACCAAGGTCTTTGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp CTTCTACCCAGCATTCCCATAAGTCTTGAAATTCCCTCTGGCTTCATTGTCTTAGGCTTGCTATTAAAGTaGGAATCTGTAGACAGTCAG +
Preference number: 3 (lower is better)
Translates to: LLPSIPISLEIPSGFIVLGLLLK*ESVDSQ
Trigger: CTGACTGTCTACAGATTCCAACTTTAATAGCAAGCC...TAAGACAATGAAGCCAGAGGGAATTTCAAGACTTATGGGAATGCTGGGTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp CTTCTACCCAGCATTCCCATAAGTCTTGAAATTCCCTCTGGCTTCATTGTCTTATGTAACTCCACAGGCTaGCTATTAAAGTTGGAATCT +
Preference number: 3 (lower is better)
Translates to: LLPSIPISLEIPSGFIVLCNSTG*LLKLES
Trigger: AGATTCCAACTTTAATAGCAAGCCTGTGGAGTTACA...TAAGACAATGAAGCCAGAGGGAATTTCAAGACTTATGGGAATGCTGGGTAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR-3UTR CAA 90 bp GTGGCTACTGCTACTTTTAAGGGGAGAATGCATTCTGATATGCAAACATTATCAGGCTTGCTATTAAAGTaGGAATCTGTAGACAGTCAG +
Preference number: 3 (lower is better)
Translates to: VATATFKGRMHSDMQTLSGLLLK*ESVDSQ
Trigger: CTGACTGTCTACAGATTCCAACTTTAATAGCAAGCC...TGATAATGTTTGCATATCAGAATGCATTCTCCCCTTAAAAGTAGCAGTAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR TCA 72 bp ATTAAAACAGCTTCTACCCAGCATTCCCATAAGTCTTaGAATTCCCTCTGGCTTCATTGTCTTAACTCACAA +
Preference number: 3 (lower is better)
Translates to: IKTASTQHSHKS*NSLWLHCLNSQ
Trigger: TTGTGAGTTAAGACAATGAAGCCAGAGGGAATTTCAAGACTTATGGGAATGCTGGGTAGAAGCTGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR GCA 72 bp AGAACCAAGTGGCTACTGCTACTTTTAAGGGGAGAATaGATTCTGATATGCAAACATTATCACAGATTCATG +
Preference number: 3 (lower is better)
Translates to: RTKWLLLLLRGE*ILICKHYHRFM
Trigger: CATGAATCTGTGATAATGTTTGCATATCAGAATGCATTCTCCCCTTAAAAGTAGCAGTAGCCACTTGGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCGCCACGCGGACCCGCTaGAGCAGCAGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQAATRTR*SSSRLP
Trigger: CGGCAGCCTGCTGCTGCTGCAGCGGGTCCGCGTGGC...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCCACTGGCAAGGTCTaGAGGGGGCCGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPATGKV*RGPGAR
Trigger: CCGGGCACCCGGCCCCCTGCAGACCTTGCCAGTGGC...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWAAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp AGGGCTCAGGGTCGTGGGAGCGCCGGCCGCGCCGCCGGAAGCTGCCCTCCTTGTTGTGGATGGCGGGCCTaGCAGCCTCGGGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RAQGRGSAGRAAGSCPPCCGWRA*QPRGPG
Trigger: CCCTGGGCCCCGAGGCTGCCAGGCCCGCCATCCACA...ACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCCTGAGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCGGGGGCGGCGGCGTaGGCCAGGCCTATCATCTGG +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPAGAAA*ARPIIW
Trigger: CCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGC...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGTGAGGCCACGGGCCTaGGCATCAGAGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQVRPRA*ASEWGA
Trigger: CGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTCAC...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCTGGCTCCTGGCACCTaGCTGTGCTCGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGLAPGT*LCSPGV
Trigger: GACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAG...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGAGCAGGGCTCCTGGCTaGAGCCCCGGGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGSRAPG*SPGMAP
Trigger: AGGAGCCATCCCGGGGCTCCAGCCAGGAGCCCTGCT...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCCCCCACGCTCACCGCTaGCAGCCGGTTCCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQAPHAHR*QPVPAV
Trigger: TACTGCGGGAACCGGCTGCCAGCGGTGAGCGTGGGG...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCGCCGCTTCCCGTACTTaGGCCAGTCCAGGACGTGCG +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQAAASRT*ASPGRA
Trigger: CGCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGC...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGAGCCAGTCCAGGACGTaGGAGGACCACCACGAGGCG +
Preference number: 4 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGSQSRT*EDHHEA
Trigger: CGCCTCGTGGTGGTCCTCGCACGTCCTGGACTGGCT...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCACGTGGGCACCAGGCTaGGCCGCAGCTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQATWAPG*AAAPRS
Trigger: ACTACGAGGAGCTGCGGCGCAGCCTGGTGCCCACGT...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCACGTGGGCACCAGGCTaGGCCGCAGCTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGTWAPG*AAAPRS
Trigger: ACTACGAGGAGCTGCGGCGCAGCCTGGTGCCCACGT...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCAGCGCAGCCCCGTGGTaGGATTGCGTCACTCAGCGG +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGSAAPW*DCVTQR
Trigger: CCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCGTTTGGCCATGCCCCTaGGCAGCAGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWAVWPCP*AAGLLA
Trigger: AGCCAGGAGCCCTGCTGCCCAGGGGCATGGCCAAAC...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAAGCATCCGCGGTAGGTaGCGGTCCGCCGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPSIRGR*RSAASW
Trigger: CCAGGAAGCGGCGGACCGCCACCTACCGCGGATGCT...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCCATCTCCCGTAACGTaGGCACCAGGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGPSPVT*APGCAA
Trigger: TGCGGCGCAGCCTGGTGCCCACGTTACGGGAGATGG...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAGCCGCTTCCCGTACTTaGGCCAGTCCAGGACGTGCG +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLAASRT*ASPGRA
Trigger: CGCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGC...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCTTTCATCTCCGGGGTaGAGGGCTCAGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGLSSPG*RAQGRG
Trigger: CCCACGACCCTGAGCCCTTCACCCCGGAGATGAAAG...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTTTCATCTCCGGGGTaGAGGGCTCAGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGLSSPG*RAQGRG
Trigger: CCCACGACCCTGAGCCCTTCACCCCGGAGATGAAAG...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GCACCAGGCTGCGCCGCAGCTCCTCGTAGTGCACCACCAGCAGCCGCTTCCCGTGCCACTGGCAAGGTCTaGAGGGGGCCGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: APGCAAAPRSAPPAAASRATGKV*RGPGAR
Trigger: CCGGGCACCCGGCCCCCTGCAGACCTTGCCAGTGGC...ACGGGAAGCGGCTGCTGGTGGTGCACTACGAGGAGCTGCGGCGCAGCCTGGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCACGGGTCAGGGGGCTCTaGAGCATGTCCACACCCAGC +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPRVRGL*SMSTPS
Trigger: GCTGGGTGTGGACATGCTGCAGAGCCCCCTGACCCG...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCTTCCTGGAGCCCGGCTaGAGCTCGTCCACACGGTAC +
Preference number: 4 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGFLEPG*SSSTRY
Trigger: GTACCGTGTGGACGAGCTGCAGCCGGGCTCCAGGAA...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCCAGTTGCGGTCAGCTaGATATCCCAGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQPVAVS*ISQVPG
Trigger: GCCGGGCACCTGGGATATGCAGCTGACCGCAACTGG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCCGCGCCGCCGGAAGCTaGCCTCCTTGTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWARAAGS*PPCCSP
Trigger: TGGAGAACAACAAGGAGGGCAGCTTCCGGCGGCGCG...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAAGCGCAGCCCCGTGGTaGGATTGCGTCACTCAGCGG +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLSAAPW*DCVTQR
Trigger: CCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCGCATCTGCCCTGCTCTaGCATGTGCACCGGTGGACC +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQAASALL*HVHRWT
Trigger: GGTCCACCGGTGCACATGGCAGAGCAGGGCAGATGC...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR CCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGACCCAGCAGCAGCTCTaGGCTGACTCGAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQTQQQL*ADSRVV
Trigger: CACGACCCTCGAGTCAGCCCAGAGCTGCTGCTGGGT...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCACCCAGCAGCAGCTCTaGGCTGACTCGAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGTQQQL*ADSRVV
Trigger: CACGACCCTCGAGTCAGCCCAGAGCTGCTGCTGGGT...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCCCCGTCCAGTTGTaGTCACGCAGGGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWASPVQL*SRRAWS
Trigger: GGACCAAGCCCTGCGTGACCACAACTGGACGGGGCT...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGGAGCGCAGCCCCGTaGTGCGATTGCGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPGSAAP*CDCVTQ
Trigger: CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGTGCCATGTGCACCGGTaGACCCTGTCCTCACCCGGA +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQCHVHR*TLSSPG
Trigger: TCCGGGTGAGGACAGGGTCCACCGGTGCACATGGCA...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR TCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCGTCCTGGCCACATACTaGGCTGTCCATGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQAVLATY*AVHGIP
Trigger: CGGGATGCCATGGACAGCTCAGTATGTGGCCAGGAC...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCGCTCACAGACACGTTaGGGAAGGCCACCATCTCCC +
Preference number: 4 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGRSQTR*GRPPSP
Trigger: GGGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCG...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GGCTCAGGGTCGTGGGAGCGCCGGCCGCGCCGCCGGAAGCTGCCCTCCTTGTTGTTCCTGGAGCCCGGCTaGAGCTCGTCCACACGGTAC +
Preference number: 4 (lower is better)
Translates to: GSGSWERRPRRRKLPSLLFLEPG*SSSTRY
Trigger: GTACCGTGTGGACGAGCTGCAGCCGGGCTCCAGGAA...CAACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCCTGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCTCAATGAGGTGCCGTaGCCATGTGTTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQLNEVP*PCVPGS
Trigger: GGAGCCGGGAACACATGGGCACGGCACCTCATTGAG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTACGCGCCGCCGGAAGCTaGCCTCCTTGTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLRAAGS*PPCCSP
Trigger: TGGAGAACAACAAGGAGGGCAGCTTCCGGCGGCGCG...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCTGCCTGTGCTCGCCTaGGGTCACTCACTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQLPVLA*GHSLFL
Trigger: CAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGGGCTCAGGGTCGTGGGAGCGCCGGCCGCGCCGCCGGAAGCTGCCCTCCTTGTACCCAGCAGCAGCTCTaGGCTGACTCGAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: RAQGRGSAGRAAGSCPPCTQQQL*ADSRVV
Trigger: CACGACCCTCGAGTCAGCCCAGAGCTGCTGCTGGGT...ACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCCTGAGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCCGTCGGCTCCGCCAGTaGTCCTTTTCGCCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQARRLRQ*SFSPLN
Trigger: GTTCAAGGGCGAAAAGGACCACTGGCGGAGCCGACG...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCGTCGGCTCCGCCAGTaGTCCTTTTCGCCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARRRLRQ*SFSPLN
Trigger: GTTCAAGGGCGAAAAGGACCACTGGCGGAGCCGACG...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCGTCGGCTCCGCCAGTaGTCCTTTTCGCCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGRRLRQ*SFSPLN
Trigger: GTTCAAGGGCGAAAAGGACCACTGGCGGAGCCGACG...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGTGGGCACATACTCCCTaGGCAGCCCCGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGWAHTP*AAPSSC
Trigger: ACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCA...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCGTCCTCACCCGGAGCTaGCTGCTAAGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGVLTRS*LLRCSQ
Trigger: CTGGGAGCATCTTAGCAGCCAGCTCCGGGTGAGGAC...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR TCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCAGCATTCCCAGCCCCTaGGAATGGCCAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQASIPSP*EWPRGT
Trigger: AGTTCCCCTTGGCCATTCTCAGGGGCTGGGAATGCT...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCAGTGGCATGCTCAATaGGGTGCCGTGCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQQWHAQ*GAVPMC
Trigger: ACACATGGGCACGGCACCTCATTGAGCATGCCACTG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCACTCTCGTGGGTTTTaGCACAGATGGTGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQHSRGF*HRWCVG
Trigger: GCCGACGCACCATCTGTGTCAAAACCCACGAGAGTG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCGCATGCTCAATGAGGTaGCGTGCCCATGTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQAACSMR*RAHVFP
Trigger: CGGGAACACATGGGCACGGCACCTCATTGAGCATGC...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCAGGAAAAGCCTGGTaGTGTTGCTCTCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARPGKAW*CCSPQT
Trigger: GGTCTGGGGAGAGCAACAGCACCAGGCTTTTCCTGG...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTCACAGCATCTGCCCTaGTCTGCCATGTGCACCGGT +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQASQHLP*SAMCTG
Trigger: ACCGGTGCACATGGCAGAGCAGGGCAGATGCTGTGA...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR CCA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGTGTGCCTCAGGGTCCTaGCCACATACTGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARCASGS*PHTELS
Trigger: GGACAGCTCAGTATGTGGCCAGGACCCTGAGGCACA...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATGGGCACATACTCCCTaGGCAGCCCCGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLWAHTP*AAPSSC
Trigger: ACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCA...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp ACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCGCGGGGGCGGCGGCGTaGGCCAGGCCTATCATCTGG +
Preference number: 4 (lower is better)
Translates to: TARAAHPGSSSLCAHLHPAGAAA*ARPIIW
Trigger: CCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGC...GGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCAGGAGCACACGGCCTaGCACCTGTGTGTTACGTCT +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQQEHTA*HLCVTS
Trigger: AGACGTAACACACAGGTGCCAGGCCGTGTGCTCCTG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCACAGTGGCATGCTCAATaGGGTGCCGTGCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPQWHAQ*GAVPMC
Trigger: ACACATGGGCACGGCACCTCATTGAGCATGCCACTG...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTACACTCTCGTGGGTTTTaGCACAGATGGTGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLHSRGF*HRWCVG
Trigger: GCCGACGCACCATCTGTGTCAAAACCCACGAGAGTG...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCACGAGGCGTAGCTGTTaGCAAAGTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGTRRSC*QSPATL
Trigger: AAGAGTGGCCGGACTTTGTCAACAGCTACGCCTCGT...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCACCAGGCTGCGCCGCAGCTCCTCGTAGTGCACCACCAGCAGCCGCTTCCCGTGCCGCTTCCCGTACTTaGGCCAGTCCAGGACGTGCG +
Preference number: 4 (lower is better)
Translates to: APGCAAAPRSAPPAAASRAASRT*ASPGRA
Trigger: CGCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGC...ACGGGAAGCGGCTGCTGGTGGTGCACTACGAGGAGCTGCGGCGCAGCCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp TTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATGTGAGGCCACGGGCCTaGGCATCAGAGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: LRHSAGAAAWARPIIWAHVRPRA*ASEWGA
Trigger: CGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTCAC...ATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCAGTCCGGCCACTCTTTaGTCTTCCAGTTGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQASPATL*SSSCGQ
Trigger: CTGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACT...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCACGTCTGTGCGTGGCTaGATTTGTATCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQATSVRG*ICIWGC
Trigger: GCACCCCCAGATACAAATGCAGCCACGCACAGACGT...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCCCAAGTCACAGCATCTaGCCTGCTCTGCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWAPSHSI*PALPCA
Trigger: TGCACATGGCAGAGCAGGGCAGATGCTGTGACTTGG...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR CCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTTCCCCACGGTCACATTaGCCTGTATCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPSPRSH*PVSGSW
Trigger: CCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGA...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCATGTGCCTCAGGGTCCTaGCCACATACTGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPCASGS*PHTELS
Trigger: GGACAGCTCAGTATGTGGCCAGGACCCTGAGGCACA...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTGCCAGGCCTATCATCTaGGCACATACTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPARPII*AHTPWA
Trigger: TGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGC...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCCACCTCCATCCCAATaGTCCTTGCTGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGPPPSQ*SLLLRA
Trigger: TGCTCTGAGCAGCAAGGACCATTGGGATGGAGGTGG...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCCACCTCCATCCCAATaGTCCTTGCTGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGPPPSQ*SLLLRA
Trigger: TGCTCTGAGCAGCAAGGACCATTGGGATGGAGGTGG...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCAGGGCCCCTATGGGTaGAGCACCAGTACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGQGPYG*STSTSN
Trigger: ATTACTGGTACTGGTGCTCCACCCATAGGGGCCCTG...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTCTTGAGCGTTGCTCCTaGGTTGCACTCCTACCCTCC +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPLERCS*VALLPS
Trigger: GGAGGGTAGGAGTGCAACCCAGGAGCAACGCTCAAG...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTGATCTAGGCTTGCTCTaGGATGCAGGTCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPDLGLL*DAGLPW
Trigger: CCAGGGCAGACCTGCATCCCAGAGCAAGCCTAGATC...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTCGTGGCCATCGTCACTaGAGCATCCAATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPRGHRH*SIQCRC
Trigger: GCACCTACATTGGATGCTTCAGTGACGATGGCCACG...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCGGTCCTTTTCGCCCTTaGACCCTTTGTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGGPFRP*TLCCRG
Trigger: CCCTCTACAACAAAGGGTTCAAGGGCGAAAAGGACC...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCGGCACATTTTCTGTTaGATTCTGCCACCAGGGACC +
Preference number: 4 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARRHIFC*ILPPGT
Trigger: GGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCG...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAACGAGGCGTAGCTGTTaGCAAAGTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPTRRSC*QSPATL
Trigger: AAGAGTGGCCGGACTTTGTCAACAGCTACGCCTCGT...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCTTCTGGGGCATGACTTaGATCTCCAGCTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGFWGMT*ISSFPE
Trigger: CTCAGGGAAGCTGGAGATTCAAGTCATGCCCCAGAA...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTCCCCACTGCCACGCCTaGCATTGCTTTCAAGGATCT +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPPHCHA*HCFQGS
Trigger: AGATCCTTGAAAGCAATGTCAGGCGTGGCAGTGGGG...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TTGTGCGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCTGGCTCCTGGCACCTaGCTGTGCTCGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LCGPEHQSGERSPVVRLRLAPGT*LCSPGV
Trigger: GACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAG...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR GCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTGCCACTGGCAAGGTCTaGAGGGGGCCGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPATGKV*RGPGAR
Trigger: CCGGGCACCCGGCCCCCTGCAGACCTTGCCAGTGGC...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCACAGAGCATAAATGTCTaGCCGGCCCAGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPQSINV*PAQHPR
Trigger: TCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTG...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGATATCTCAACGTCCTaGTCTCCCAGATCCCTCACC +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQDISTS*SPRSLT
Trigger: GGTGAGGGATCTGGGAGAGCAGGACGTTGAGATATC...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAGGAGCAGGTGGTGGTaGCTCTTACTCCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPRSRWW*LLLRLP
Trigger: AGGAAGACGGAGTAAGAGGCACCACCACCTGCTCCT...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCAGCACACGCATCCTaGCAGTGGGAGACAGTCATC +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLSAHAS*QWETVI
Trigger: GATGACTGTCTCCCACTGCCAGGATGCGTGTGCTGA...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp ACACGGTACACGGAGAGCCGGTCCACAGCCCCGCACACAGAGCCCTTCTCGCCTCCCCACGCTCACCGCTaGCAGCCGGTTCCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: TRYTESRSTAPHTEPFSPPHAHR*QPVPAV
Trigger: TACTGCGGGAACCGGCTGCCAGCGGTGAGCGTGGGG...AGGCGAGAAGGGCTCTGTGTGCGGGGCTGTGGACCGGCTCTCCGTGTACCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTCGCCTTTGCACTCATaGTTACACTCTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQASPLHS*LHSSSP
Trigger: GGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGCGA...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp CACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCAGCATCCGCGGTAGGTaGCGGTCCGCCGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HGQGRTPWKQQSLCPPPSSIRGR*RSAASW
Trigger: CCAGGAAGCGGCGGACCGCCACCTACCGCGGATGCT...GGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCCTCCTGCCACTCTCGTaGGTTTTGACACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQALLPLS*VLTQMV
Trigger: CACCATCTGTGTCAAAACCCACGAGAGTGGCAGGAG...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGTGTCTGAGGAGGTGTaGGTTCGTGGCCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPVSEEV*VRGQVC
Trigger: ACATACCTGGCCACGAACCCACACCTCCTCAGACAC...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCACGGCACATTTTCTGTTaGATTCTGCCACCAGGGACC +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPRHIFC*ILPPGT
Trigger: GGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCG...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCTTTCATCTCCGGGGTaGAGGGCTCAGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGLSSPG*RAQGRG
Trigger: CCCACGACCCTGAGCCCTTCACCCCGGAGATGAAAG...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGAAACTGGATGGACACTaGCCCCATCACTCTACTTGC +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQKLDGH*PHHSTC
Trigger: GCAAGTAGAGTGATGGGGTCAGTGTCCATCCAGTTT...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGAGGCGTCATCCTTaGATCCTGGCTCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGRRRHP*ILAPGT
Trigger: GGTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCG...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGGGTCGTGCAGGGCTCTaGTGTCCAGCAAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQGRAGL*CPASPR
Trigger: GCGTGGGCTTGCTGGACAGCAGAGCCCTGCACGACC...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAGCTGCATATCCCAGGTaGCCGGCACATTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLAAYPR*PAHFLL
Trigger: CAACAGAAAATGTGCCGGGCACCTGGGATATGCAGC...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCTTTGCTCTTCCAGTTaGGGTCAGCTGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQLCSSS*GQLHIP
Trigger: TGGGATATGCAGCTGACCGCAACTGGAAGAGCAAAG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAGCTGGCTGCTAAGATaGTCCCAGAAGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPSWLLR*SQKLRT
Trigger: TGTCCTCAGCTTCTGGGAGCATCTTAGCAGCCAGCT...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAAGCTGGCTGCTAAGATaGTCCCAGAAGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPSWLLR*SQKLRT
Trigger: TGTCCTCAGCTTCTGGGAGCATCTTAGCAGCCAGCT...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGCCCTGCTCTGCCATGTaGACCGGTGGACCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EHQSGERSPVVRLRHSAGPCSAM*TGGPCP
Trigger: AGGACAGGGTCCACCGGTGCACATGGCAGAGCAGGG...CCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR CCA 90 bp GTCTCCTTGTGCGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCATCCTGGCTCCTaGCACCTGCCTGTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: VSLCGPEHQSGERSPVVRLHPGS*HLPVLA
Trigger: GGCGAGCACAGGCAGGTGCCAGGAGCCAGGATGCAA...TCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGCACAAGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTGCTGGAGCCCCGGGATaGCTCCTAGCGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPAGAPG*LLAPRW
Trigger: CCACCTGGGCGCTAGGAGCCATCCCGGGGCTCCAGC...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCGGCGGAGAAACTTCTaGAGTCGGAAGAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AAPWCDCVTQRGRRRGPGRRRNF*SRKKGL
Trigger: CAAACCTTTCTTCCGACTCCAGAAGTTTCTCCGCCG...GCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTATGTGGATGGCGGGCCTaGCAGCCTCGGGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLCGWRA*QPRGPG
Trigger: CCCTGGGCCCCGAGGCTGCCAGGCCCGCCATCCACA...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAATGTGTGATGTTCTCTaGCAGTCGGAAGCATCCGCG +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPMCDVL*QSEASA
Trigger: CGCGGATGCTTCCGACTGCCAGAGAACATCACACAT...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAATGTGTGATGTTCTCTaGCAGTCGGAAGCATCCGCG +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLMCDVL*QSEASA
Trigger: CGCGGATGCTTCCGACTGCCAGAGAACATCACACAT...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCCATCTCCCGTAACGTaGGCACCAGGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQPSPVT*APGCAA
Trigger: TGCGGCGCAGCCTGGTGCCCACGTTACGGGAGATGG...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCAGCAGCAGCTCTGGGCTaGCTCGAGGGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CQTHGQGRTPWKQQSLCPAAALG*LEGRAG
Trigger: CCCTGCACGACCCTCGAGTCAGCCCAGAGCTGCTGC...TGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCCTGCACTCTTCACTaGGGTACAGAGTCATCTACA +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPACTLH*GTESST
Trigger: TGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGC...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCGCCACGCGGACCCGCTaGAGCAGCAGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGAATRTR*SSSRLP
Trigger: CGGCAGCCTGCTGCTGCTGCAGCGGGTCCGCGTGGC...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGAGCCCTTCTCGCCTTTaGACTCATGGTTACACTCTT +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQSPSRL*THGYTL
Trigger: AAGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCT...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp ACACGGTACACGGAGAGCCGGTCCACAGCCCCGCACACAGAGCCCTTCTCGCCTCCAGTTGCGGTCAGCTaGATATCCCAGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TRYTESRSTAPHTEPFSPPVAVS*ISQVPG
Trigger: GCCGGGCACCTGGGATATGCAGCTGACCGCAACTGG...AGGCGAGAAGGGCTCTGTGTGCGGGGCTGTGGACCGGCTCTCCGTGTACCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCACTTTGCTCTTCCAGTTaGGGTCAGCTGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPLCSSS*GQLHIP
Trigger: TGGGATATGCAGCTGACCGCAACTGGAAGAGCAAAG...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp ACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCCGCGCCGCCGGAAGCTaGCCTCCTTGTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TARAAHPGSSSLCAHLHPRAAGS*PPCCSP
Trigger: TGGAGAACAACAAGGAGGGCAGCTTCCGGCGGCGCG...GGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCACAAATGGACTTTCCTaGAAGCACAGACAGATCCCC +
Preference number: 4 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWATNGLS*KHRQIP
Trigger: GGGGATCTGTCTGTGCTTGCAGGAAAGTCCATTTGT...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTTTCAGAGTCCTCTCGTaGCCATCGTCACTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPFRVLS*PSSLKH
Trigger: ATGCTTCAGTGACGATGGCCACGAGAGGACTCTGAA...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCCCCACGCTCACCGCTaGCAGCCGGTTCCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSPHAHR*QPVPAV
Trigger: TACTGCGGGAACCGGCTGCCAGCGGTGAGCGTGGGG...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCAGCATCCGCGGTAGGTaGCGGTCCGCCGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRTPWKQQSLCPPPSQWSSIRGR*RSAASW
Trigger: CCAGGAAGCGGCGGACCGCCACCTACCGCGGATGCT...GGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGAAGGGGAACTCTTTCTaGGAACAAAAGCCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQKGNSF*EQKPEQ
Trigger: TTGCTCGGGCTTTTGTTCCCAGAAAGAGTTCCCCTT...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCTGTGCCTCAGGGTCCTaGCCACATACTGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EATGLSIRVGSAAPWCDCCASGS*PHTELS
Trigger: GGACAGCTCAGTATGTGGCCAGGACCCTGAGGCACA...GCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GTAACGTGGGCACCAGGCTGCGCCGCAGCTCCTCGTAGTGCACCACCAGCAGCCCAGGGCCGCACACCCTaGAAGCAGCAGTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: VTWAPGCAAAPRSAPPAAQGRTP*KQQSLC
Trigger: GCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTG...GGCTGCTGGTGGTGCACTACGAGGAGCTGCGGCGCAGCCTGGTGCCCACGTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGGATGCAGGTCTGCCCTaGCTATCCCGTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGDAGLP*LSRPQQ
Trigger: CTGCTGTGGACGGGATAGCCAGGGCAGACCTGCATC...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCCGCCCCTCATCTCCTaGCGCAGAAATCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQPPLIS*RRNPEL
Trigger: CAGCTCCGGATTTCTGCGCCAGGAGATGAGGGGCGG...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp GAGGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCTCAGGTAGGCAGCCGTaGGGAAGAACAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: EATGLSIRVGSAAPWCDCSGRQP*GRTAGT
Trigger: AGTTCCTGCTGTTCTTCCTCACGGCTGCCTACCTGA...GCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp GGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTTGGGGAAGGCATGTGTaGTGTTCTCTGGCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: GHGPEHQSGERSPVVRLRWGRHV*CSLAVG
Trigger: TCCGACTGCCAGAGAACATCACACATGCCTTCCCCA...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATCACTCTCGTGGGTTTTaGCACAGATGGTGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: LRHSAGAAAWARPIIWAHHSRGF*HRWCVG
Trigger: GCCGACGCACCATCTGTGTCAAAACCCACGAGAGTG...ATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCTTTCATCTCCGGGGTaGAGGGCTCAGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSILSSPG*RAQGRG
Trigger: CCCACGACCCTGAGCCCTTCACCCCGGAGATGAAAG...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATTTGTGTTCGCCTTGTaGTGTGTGTCTGTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLFVFAL*CVSVVS
Trigger: GGACACAACAGACACACATCACAAGGCGAACACAAA...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCCACGCGGACCCGCTaGAGCAGCAGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLAATRTR*SSSRLP
Trigger: CGGCAGCCTGCTGCTGCTGCAGCGGGTCCGCGTGGC...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCGGGTCAGGGGGCTCTaGAGCATGTCCACACCCAGC +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSRVRGL*SMSTPS
Trigger: GCTGGGTGTGGACATGCTGCAGAGCCCCCTGACCCG...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAAGCCCTTCTCGCCTTTaGACTCATGGTTACACTCTT +
Preference number: 4 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPSPSRL*THGYTL
Trigger: AAGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCT...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp GGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTGACCTCACAGTATTCTaGCAGCCTCTGTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GHGPEHQSGERSPVVRLRDLTVF*QPLCLR
Trigger: CCTGAGGCACAGAGGCTGGCAGAATACTGTGAGGTC...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCAGTCCGGCCACTCTTTaGTCTTCCAGTTGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: EATGLSIRVGSAAPWCDCSPATL*SSSCGQ
Trigger: CTGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACT...GCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCACGTGGGCACCAGGCTaGGCCGCAGCTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: GRTPWKQQSLCPPPSQWSTWAPG*AAAPRS
Trigger: ACTACGAGGAGCTGCGGCGCAGCCTGGTGCCCACGT...GGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCCATCCCAATGGTCCTTaGTGCTCAGAGCATAAATGT +
Preference number: 4 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWAHPNGP*CSEHKC
Trigger: ACATTTATGCTCTGAGCAGCAAGGACCATTGGGATG...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCGGGGGCGGCGGCGTaGGCCAGGCCTATCATCTGG +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLAGAAA*ARPIIW
Trigger: CCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGC...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGCTGGCACACCCCACGTaGGTGGCTTCTCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: EHQSGERSPVVRLRHSAGLAHPT*VASLHQ
Trigger: TTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAG...CCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GTCTCCTTGTGCGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGACAGGAGCACACGGCCTaGCACCTGTGTGTTACGTCT +
Preference number: 4 (lower is better)
Translates to: VSLCGPEHQSGERSPVVRQEHTA*HLCVTS
Trigger: AGACGTAACACACAGGTGCCAGGCCGTGTGCTCCTG...TCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGCACAAGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CCA 90 bp GAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGCATAGCGGGTGGCTCTaGGTTCCCCATCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: EHQSGERSPVVRLRHSAGHSGWL*VPHHQA
Trigger: AGCCTGATGATGGGGAACCCAGAGCCACCCGCTATG...CCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCCAGCGGCGACGCAACTaGCGCAGCTCCGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCQRRRN*RSSELR
Trigger: CCGCAACTCGGAGCTGCGTCAGTTGCGTCGCCGCTG...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGTGGGGAAGGCATGTGTaGTGTTCTCTGGCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGWGRHV*CSLAVG
Trigger: TCCGACTGCCAGAGAACATCACACATGCCTTCCCCA...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR TCA 90 bp TCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATACTCCCTGGGGTCCTTTTCGCCCTTaGACCCTTTGTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SAGAAAWARPIIWAHTPWGPFRP*TLCCRG
Trigger: CCCTCTACAACAAAGGGTTCAAGGGCGAAAAGGACC...CCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACCGTTCGTCCCAGTaGGGCCACGGGCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLHRSSQ*GHGPEH
Trigger: ATGCTCAGGCCCGTGGCCTCACTGGGACGAACGGTG...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTAGGTCGTGCAGGGCTCTaGTGTCCAGCAAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLGRAGL*CPASPR
Trigger: GCGTGGGCTTGCTGGACAGCAGAGCCCTGCACGACC...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATGACGCAGCTCCGAGTTaGGGCTCCGGAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYDAAPS*GSGASG
Trigger: CCCGCTGGCTCCGGAGCCGCAACTCGGAGCTGCGTC...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AGTCCCCACGGTCACATTGGCCTGTATCAGGGAGCTGGGGAAGGCATGTGTGATGACGCAGCTCCGAGTTaGGGCTCCGGAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SPHGHIGLYQGAGEGMCDDAAPS*GSGASG
Trigger: CCCGCTGGCTCCGGAGCCGCAACTCGGAGCTGCGTC...ATCACACATGCCTTCCCCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp GAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGACCTCACAGTATTCTaGCAGCCTCTGTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EHQSGERSPVVRLRHSAGDLTVF*QPLCLR
Trigger: CCTGAGGCACAGAGGCTGGCAGAATACTGTGAGGTC...CCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR GCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTAAGCCAGTCCAGGACGTaGGAGGACCACCACGAGGCG +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLSQSRT*EDHHEA
Trigger: CGCCTCGTGGTGGTCCTCGCACGTCCTGGACTGGCT...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCCTTCTCCTCCCAATaGAGCTTGGCTCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: EHQSGERSPVVRLRHSAGAFSSQ*SLAQAE
Trigger: TTCAGCCTGAGCCAAGCTGCATTGGGAGGAGAAGGC...CCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp GGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTACATCCAGGAGTACCTaGCAAGTGCCAGGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GHGPEHQSGERSPVVRLRTSRST*QVPGVL
Trigger: CAAGACACCTGGCACTTGGCAGGTACTCCTGGATGT...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp CAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCAGCATCCAATGTAGGTaGCTAAAGATTTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPRGAIASLSGGGGVGQASIQCR*LKIFPR
Trigger: CCTGGGAAAAATCTTTAGGCACCTACATTGGATGCT...GGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR CCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCAGCAGGGCTCCTGGCTaGAGCCCCGGGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGASRAPG*SPGMAP
Trigger: AGGAGCCATCCCGGGGCTCCAGCCAGGAGCCCTGCT...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTAGGGCGGGCGGTCCCTaGGAGTCACTCATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPRAGGP*ESLMKW
Trigger: CCACTTCATGAGTGACTCCCAGGGACCGCCCGCCCT...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGTGTGGATGGCGGGCCTaGCAGCCTCGGGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQCGWRA*QPRGPG
Trigger: CCCTGGGCCCCGAGGCTGCCAGGCCCGCCATCCACA...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCCCCCACGCTCACCGCTaGCAGCCGGTTCCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCPHAHR*QPVPAV
Trigger: TACTGCGGGAACCGGCTGCCAGCGGTGAGCGTGGGG...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTTCGCCTTTGCACTCATaGTTACACTCTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHGPEHQSGERSPVVRLRSPLHS*LHSSSP
Trigger: GGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGCGA...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCAGCATCCGCGGTAGGTaGCGGTCCGCCGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPSIRGR*RSAASW
Trigger: CCAGGAAGCGGCGGACCGCCACCTACCGCGGATGCT...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGGGCAGCCCCGTCCAGTTGTGGTCACGCAGGGCTTGGTCCACCGTCCGGATGTTCCCCACGGTCACATTaGCCTGTATCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WAAPSSCGHAGLGPPSGCSPRSH*PVSGSW
Trigger: CCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGA...ACATCCGGACGGTGGACCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCACCATCTCCCGTAACGTaGGCACCAGGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPPSPVT*APGCAA
Trigger: TGCGGCGCAGCCTGGTGCCCACGTTACGGGAGATGG...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCTGGGCACATACTCCCTaGGCAGCCCCGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSIWAHTP*AAPSSC
Trigger: ACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCA...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCGCCAGGCCTATCATCTaGGCACATACTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HGQGRTPWKQQSLCPPPSARPII*AHTPWA
Trigger: TGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGC...GGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCACACCCCACGTGGGTaGCTTCTCTGCATCAAGACG +
Preference number: 4 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQHTPRG*LLCIKT
Trigger: CGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTG...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TTGTGCGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCTGGCACACCCCACGTaGGTGGCTTCTCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: LCGPEHQSGERSPVVRLRLAHPT*VASLHQ
Trigger: TTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAG...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CCA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGTATTCCTTGGCTGGTTaGGAGAGTATCCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGYSLAG*ESILFT
Trigger: AGTAAAGAGGATACTCTCCCAACCAGCCAAGGAATA...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGTCAGGTAGGCAGCCGTaGGGAAGAACAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQSGRQP*GRTAGT
Trigger: AGTTCCTGCTGTTCTTCCTCACGGCTGCCTACCTGA...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCAGCAGCTCTGGGCTaGCTCGAGGGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLAAALG*LEGRAG
Trigger: CCCTGCACGACCCTCGAGTCAGCCCAGAGCTGCTGC...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGCAGCAGCTCTGGGCTaGCTCGAGGGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SINVCPAQHPRVEHPDEQAAALG*LEGRAG
Trigger: CCCTGCACGACCCTCGAGTCAGCCCAGAGCTGCTGC...TTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp CACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCGTGGCCATCGTCACTaGAGCATCCAATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: HGQGRTPWKQQSLCPPPSRGHRH*SIQCRC
Trigger: GCACCTACATTGGATGCTTCAGTGACGATGGCCACG...GGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATCGGCACATTTTCTGTTaGATTCTGCCACCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LRHSAGAAAWARPIIWAHRHIFC*ILPPGT
Trigger: GGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCG...ATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGACCCACTGGCCAAACTaGAGGTTGGAGGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQTHWPN*RLEEAS
Trigger: GGAAGCTTCCTCCAACCTTCAGTTTGGCCAGTGGGT...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCGTGGCCACAGGGTCCTaGAGCTGCAGCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSVATGS*SCSLCP
Trigger: TGGGCAGAGGCTGCAGCTGCAGGACCCTGTGGCCAC...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTGACGCAGCTCCGAGTTaGGGCTCCGGAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSDAAPS*GSGASG
Trigger: CCCGCTGGCTCCGGAGCCGCAACTCGGAGCTGCGTC...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGAGCCAGTCCAGGACGTaGGAGGACCACCACGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLAPVCYVCAWLHLYLGVSQSRT*EDHHEA
Trigger: CGCCTCGTGGTGGTCCTCGCACGTCCTGGACTGGCT...CACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCGCAGCCCCGTGGTaGGATTGCGTCACTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PHTHLWDVRHTARAAHPGSAAPW*DCVTQR
Trigger: CCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT...TCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCGGCAGTCCTCAACCCTaGCCATGGTGCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPGSPQP*PWCSQP
Trigger: GGGCTGGCTGCACCATGGGCAGGGTTGAGGACTGCC...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGGCTGGAGCCCCGGGATaGCTCCTAGCGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSASRRGYEPGVVSECLRAGAPG*LLAPRW
Trigger: CCACCTGGGCGCTAGGAGCCATCCCGGGGCTCCAGC...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCGTTTGGCCATGCCCCTaGGCAGCAGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPVWPCP*AAGLLA
Trigger: AGCCAGGAGCCCTGCTGCCCAGGGGCATGGCCAAAC...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACATGCCTCGGCTGTGGATaGCGGGCCTGGCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTCLGCG*RAWQPR
Trigger: CCGAGGCTGCCAGGCCCGCCATCCACAGCCGAGGCA...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AAGAGAGGCAAGGCTGCGGAGTTTGTGGTGCCCGTAGTCACACCACACACACATTGCCTCGGCTGTGGATaGCGGGCCTGGCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KRGKAAEFVVPVVTPHTHCLGCG*RAWQPR
Trigger: CCGAGGCTGCCAGGCCCGCCATCCACAGCCGAGGCA...ATGTGTGTGTGGTGTGACTACGGGCACCACAAACTCCGCAGCCTTGCCTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCTTCAGAGTCCTCTCGTaGCCATCGTCACTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EATGLSIRVGSAAPWCDCFRVLS*PSSLKH
Trigger: ATGCTTCAGTGACGATGGCCACGAGAGGACTCTGAA...GCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCCCATCTCCCGTAACGTaGGCACCAGGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGAPSPVT*APGCAA
Trigger: TGCGGCGCAGCCTGGTGCCCACGTTACGGGAGATGG...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTGGGAGCGCAGCCCCGTaGTGCGATTGCGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LWDVRHTARAAHPGSSSLGSAAP*CDCVTQ
Trigger: CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC...AAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCGGAGGTGTGGGTTCGTaGCCAGGTATGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: HGQGRTPWKQQSLCPPPSGGVGS*PGMCVH
Trigger: ATGGACACACATACCTGGCCACGAACCCACACCTCC...GGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCGGCTGCATTTGTATCTaGGGGTGCCTGGCACACCCC +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSGCICI*GCLAHP
Trigger: GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCC...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCATGTATTCCACCCCTaGAGAGGCTCTGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGHVFHP*RGSGRS
Trigger: TGATCTGCCAGAGCCTCTCCAGGGGTGGAATACATG...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCATAGGACCTCGGCTGTaGATGGCGGGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCIGPRL*MAGLAA
Trigger: GGCTGCCAGGCCCGCCATCCACAGCCGAGGTCCTAT...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CAA 72 bp GGTGGTGGGCAGTGCACAGACTTGGTGTGGCTGGTCTaGAGGTCAGTGTCTGCATTGGCTTGGGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGQCTDLVWLV*RSVSALAWAGW
Trigger: CCACCCCGCCCAAGCCAATGCAGACACTGACCTCAAGACCAGCCACACCAAGTCTGTGCACTGCCCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CAA 72 bp CCTGGGCAGCCCCGTCCAGTTGTGGTCACGCAGGGCTaGGTCCACCGTCCGGATGTAGCCATTGATCAAGTC +
Preference number: 4 (lower is better)
Translates to: PGQPRPVVVTQG*VHRPDVAIDQV
Trigger: GACTTGATCAATGGCTACATCCGGACGGTGGACCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp GTGGTCACGCAGGGCTTGGTCCACCGTCCGGATGTAGCCATTGATCAAGTCTTTCAGCGGCGACGCAACTaGCGCAGCTCCGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: VVTQGLVHRPDVAIDQVFQRRRN*RSSELR
Trigger: CCGCAACTCGGAGCTGCGTCAGTTGCGTCGCCGCTG...AAAGACTTGATCAATGGCTACATCCGGACGGTGGACCAAGCCCTGCGTGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp TGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTCCTGGGAGTCACTCATaGAGTGGTGGAACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: WDVRHTARAAHPGSSSLCPGSHS*SGGTSG
Trigger: GCCGCTGGTTCCACCACTTCATGAGTGACTCCCAGG...ACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACGCCGCTTCCCGTACTTaGGCCAGTCCAGGACGTGCG +
Preference number: 4 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHAASRT*ASPGRA
Trigger: CGCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGC...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATACTCCCTGGTTTGTGTTCGCCTTGTaGTGTGTGTCTGTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SAGAAAWARPIIWAHTPWFVFAL*CVSVVS
Trigger: GGACACAACAGACACACATCACAAGGCGAACACAAA...CCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGCTCCTTGTGCGGGCCTaGGCATCAGAGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLLLVRA*ASEWGA
Trigger: CGCTCCCCACTCTGATGCTCAGGCCCGCACAAGGAG...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCCTGGCACCTGCCTGTaGTCGCCTGGGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIPGTCL*SPGVTH
Trigger: GTGAGTGACCCCAGGCGAGCACAGGCAGGTGCCAGG...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCGGGTCAGGGGGCTCTaGAGCATGTCCACACCCAGC +
Preference number: 4 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHRVRGL*SMSTPS
Trigger: GCTGGGTGTGGACATGCTGCAGAGCCCCCTGACCCG...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTAGCCAGTCCAGGACGTaGGAGGACCACCACGAGGCG +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLASQSRT*EDHHEA
Trigger: CGCCTCGTGGTGGTCCTCGCACGTCCTGGACTGGCT...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACCGCGCCGCCGGAAGCTaGCCTCCTTGTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDRAAGS*PPCCSP
Trigger: TGGAGAACAACAAGGAGGGCAGCTTCCGGCGGCGCG...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTAGCGCAGCCCCGTGGTaGGATTGCGTCACTCAGCGG +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLASAAPW*DCVTQR
Trigger: CCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTGGAACTTCAGCTCCTaGCCTCTTCCCCACGCCCCC +
Preference number: 4 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCWNFSS*PLPHAP
Trigger: GGGGGCGTGGGGAAGAGGGCAGGAGCTGAAGTTCCA...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGCCAGATCCCTCACCCTaGCTTCTCCTCCCAATGCAG +
Preference number: 4 (lower is better)
Translates to: CPAQHPRVEHPDEQVYARPDPSP*LLLPMQ
Trigger: CTGCATTGGGAGGAGAAGGCAGGGTGAGGGATCTGG...CCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGGGCGGGCGGTCCCTaGGAGTCACTCATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSRAGGP*ESLMKW
Trigger: CCACTTCATGAGTGACTCCCAGGGACCGCCCGCCCT...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCAAGGGGAACTCTTTCTaGGAACAAAAGCCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: EATGLSIRVGSAAPWCDCKGNSF*EQKPEQ
Trigger: TTGCTCGGGCTTTTGTTCCCAGAAAGAGTTCCCCTT...GCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp ACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCCTCCTGCCACTCTCGTaGGTTTTGACACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: TARAAHPGSSSLCAHLHPLLPLS*VLTQMV
Trigger: CACCATCTGTGTCAAAACCCACGAGAGTGGCAGGAG...GGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTGCCAGGCCTATCATCTaGGCACATACTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPARPII*AHTPWA
Trigger: TGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGC...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCACAGGGCCGCACACCCTaGAAGCAGCAGTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPQGRTP*KQQSLC
Trigger: GCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTG...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTAGAACAGGGCCCCTATaGGTGGAGCACCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPRTGPL*VEHQYQ
Trigger: CTGGTACTGGTGCTCCACCCATAGGGGCCCTGTTCT...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTCCGTCCACAGCAGTGTaGAAACTCCTGAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPPSTAV*KLLRGL
Trigger: GAGACCCCTCAGGAGTTTCCACACTGCTGTGGACGG...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTTTCAGATACCTCCAATaGGTTTCCGAGCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GHGPEHQSGERSPVVRLRFRYLQ*VSEQVS
Trigger: GCTGACTTGCTCGGAAACCCATTGGAGGTATCTGAA...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCCCCAGTCACCATAGCTaGAAAGATGGAAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: EATGLSIRVGSAAPWCDCPSHHS*KDGRCH
Trigger: ATGACACCTTCCATCTTTCCAGCTATGGTGACTGGG...GCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp ACTCTTTCTGGGAACAAAAGCCCGAGCAAGTCCCCACGGTCACATTGGCCTGTAGACCTCGGCTGTGGATaGCGGGCCTGGCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLSGNKSPSKSPRSHWPVDLGCG*RAWQPR
Trigger: CCGAGGCTGCCAGGCCCGCCATCCACAGCCGAGGTC...TACAGGCCAATGTGACCGTGGGGACTTGCTCGGGCTTTTGTTCCCAGAAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
3UTR CAA 72 bp CCCTGCATCTCGGCCACCTTGAGCGTTGCTCCTGGGTaGCACTCCTACCCTCCATACTTGAACCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PCISATLSVAPG*HSYPPYLNLLA
Trigger: GGCCAGGAGGTTCAAGTATGGAGGGTAGGAGTGCAACCCAGGAGCAACGCTCAAGGTGGCCGAGATGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS-3UTR TCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCACGAGGCGTAGCTGTTaGCAAAGTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSTRRSC*QSPATL
Trigger: AAGAGTGGCCGGACTTTGTCAACAGCTACGCCTCGT...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp CCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGACGCTCACAGACACGTTaGGGAAGGCCACCATCTCCC +
Preference number: 4 (lower is better)
Translates to: PHTHLWDVRHTARAAHPGRSQTR*GRPPSP
Trigger: GGGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCG...TCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp ACAGACACGTTGAGGAAGGCCACCATCTCCCGTAACGTGGGCACCAGGCTGCGCCAGAGTCGAACACCCTaGCGAGCAAGTCTATGCCAG +
Preference number: 4 (lower is better)
Translates to: TDTLRKATISRNVGTRLRQSRTP*RASLCQ
Trigger: CTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTG...GCGCAGCCTGGTGCCCACGTTACGGGAGATGGTGGCCTTCCTCAACGTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGTGGCCACAGGGTCCTaGAGCTGCAGCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQVATGS*SCSLCP
Trigger: TGGGCAGAGGCTGCAGCTGCAGGACCCTGTGGCCAC...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCGGAGGCGTCATCCTTaGATCCTGGCTCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYRRRHP*ILAPGT
Trigger: GGTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCG...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTCTGACTCGAGGGTCGTaGAGGGCTCTGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLALTRGS*RALLSS
Trigger: GCTGGACAGCAGAGCCCTGCACGACCCTCGAGTCAG...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATTTCCTGGAGCCCGGCTaGAGCTCGTCCACACGGTAC +
Preference number: 4 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYFLEPG*SSSTRY
Trigger: GTACCGTGTGGACGAGCTGCAGCCGGGCTCCAGGAA...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGACCTCACAGTATTCTaGCAGCCTCTGTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ARAAHPGSSSLCAHLHPNDLTVF*QPLCLR
Trigger: CCTGAGGCACAGAGGCTGGCAGAATACTGTGAGGTC...ATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTCTCAATGAGGTGCCGTaGCCATGTGTTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFLNEVP*PCVPGS
Trigger: GGAGCCGGGAACACATGGGCACGGCACCTCATTGAG...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCAGTTGCGGTCAGCTaGATATCCCAGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYPVAVS*ISQVPG
Trigger: GCCGGGCACCTGGGATATGCAGCTGACCGCAACTGG...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCAGTTGCGGTCAGCTaGATATCCCAGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHPVAVS*ISQVPG
Trigger: GCCGGGCACCTGGGATATGCAGCTGACCGCAACTGG...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCAACGTGGGCACCAGGCTaGGCCGCAGCTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: VVTPHTHLWDVRHTARAATWAPG*AAAPRS
Trigger: ACTACGAGGAGCTGCGGCGCAGCCTGGTGCCCACGT...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCGTCCAGGTCTCCTTGTaGGGGAGGCAGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIVQVSL*GRQHQG
Trigger: ACCCTGGTGCTGCCTCCCGCACAAGGAGACCTGGAC...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACGTCCAGGTCTCCTTGTaGGGGAGGCAGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHVQVSL*GRQHQG
Trigger: ACCCTGGTGCTGCCTCCCGCACAAGGAGACCTGGAC...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp TCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATACTCCCTGGTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCT +
Preference number: 4 (lower is better)
Translates to: SAGAAAWARPIIWAHTPWCVLRL*VAAFVS
Trigger: AGATACAAATGCAGCCACGCACAGACGTAACACACA...CCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCACTTGAGGTCAGTGTCTaGATTGGCTTGGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPLEVSV*IGLGGV
Trigger: CACCCCGCCCAAGCCAATGCAGACACTGACCTCAAG...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGGCTGTGAGGACCACTaGCAGCTGACAGGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLGCEDH*QLTGPL
Trigger: CAACGGCCCTGTCAGCTGGCAGTGGTCCTCACAGCC...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGTCCAGGTCTCCTTGTaGGGGCCTGAGCATCAGAGT +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPVQVSL*GPEHQS
Trigger: ACTCTGATGCTCAGGCCCGCACAAGGAGACCTGGAC...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CCA 90 bp GGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCTGCCTGTGCTCGCCTaGGGTCACTCACTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GLAPVCYVCAWLHLYLGVLPVLA*GHSLFL
Trigger: CAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAG...CACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCTCACTCATGAAGTGGTaGAACCAGCGGCGACGCAAC +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSSLMKW*NQRRRN
Trigger: GTTGCGTCGCCGCTGGTTCCACCACTTCATGAGTGA...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGAGTCACTCATGAAGTaGTGGAACCAGCGGCGACGC +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPESLMK*WNQRRR
Trigger: GCGTCGCCGCTGGTTCCACCACTTCATGAGTGACTC...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTAGGGCGGGCGGTCCCTaGGAGTCACTCATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLARAGGP*ESLMKW
Trigger: CCACTTCATGAGTGACTCCCAGGGACCGCCCGCCCT...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCTCAGCACACGCATCCTaGCAGTGGGAGACAGTCATC +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSSAHAS*QWETVI
Trigger: GATGACTGTCTCCCACTGCCAGGATGCGTGTGCTGA...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGAGCCCCGTCCAGTTGTaGTCACGCAGGGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLSPVQL*SRRAWS
Trigger: GGACCAAGCCCTGCGTGACCACAACTGGACGGGGCT...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp ATAGCGGGTGGCTCTGGGTTCCCCATCATCAGGCTAGGAAGCAGAGGGTCAGGATGGGCACATACTCCCTaGGCAGCCCCGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IAGGSGFPIIRLGSRGSGWAHTP*AAPSSC
Trigger: ACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCA...TCCTGACCCTCTGCTTCCTAGCCTGATGATGGGGAACCCAGAGCCACCCGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGCCTGAGCATCAGAGTGGGAGCGCAGCCCCGTaGTGCGATTGCGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VMCVCCVQVSLCGPEHQSGSAAP*CDCVTQ
Trigger: CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC...ACTCTGATGCTCAGGCCCGCACAAGGAGACCTGGACACAACAGACACACATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CCA 90 bp GTGGTCACGCAGGGCTTGGTCCACCGTCCGGATGTAGCCATTGATCAAGTCTTTGGGAGCGCAGCCCCGTaGTGCGATTGCGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VVTQGLVHRPDVAIDQVFGSAAP*CDCVTQ
Trigger: CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC...AAAGACTTGATCAATGGCTACATCCGGACGGTGGACCAAGCCCTGCGTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CCA 90 bp TGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGTGTCTGAGGAGGTGTaGGTTCGTGGCCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: CPAQHPRVEHPDEQVYARVSEEV*VRGQVC
Trigger: ACATACCTGGCCACGAACCCACACCTCCTCAGACAC...CCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACCAGGGCCGCACACCCTaGAAGCAGCAGTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDQGRTP*KQQSLC
Trigger: GCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTG...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTCAGCGGCGACGCAACTaGCGCAGCTCCGAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: TCLHSSLRYRVIYKATGAQRRRN*RSSELR
Trigger: CCGCAACTCGGAGCTGCGTCAGTTGCGTCGCCGCTG...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGTCCTGGCCACATACTaGGCTGTCCATGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLAVLATY*AVHGIP
Trigger: CGGGATGCCATGGACAGCTCAGTATGTGGCCAGGAC...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGGTCCTTTTCGCCCTTaGACCCTTTGTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: CPAQHPRVEHPDEQVYARGPFRP*TLCCRG
Trigger: CCCTCTACAACAAAGGGTTCAAGGGCGAAAAGGACC...CCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCGCTCACAGACACGTTaGGGAAGGCCACCATCTCCC +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIRSQTR*GRPPSP
Trigger: GGGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCG...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGCGCTCACAGACACGTTaGGGAAGGCCACCATCTCCC +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLRSQTR*GRPPSP
Trigger: GGGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCG...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTCTTGCTTCTGGGGCATaGCTTGAATCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPLASGA*LESPAS
Trigger: GGAAGCTGGAGATTCAAGTCATGCCCCAGAAGCAAG...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTCTACCTGGAGAGAGATaGCATCTCTGGGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: WDVRHTARAAHPGSSSLCLPGER*HLWVPG
Trigger: GCCAGGTACCCAGAGATGTCATCTCTCTCCAGGTAG...ACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCGTCACTCACTGTTCCTaGCCCGTTTCCAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSVTHCS*PVSSRC
Trigger: ACACCTACTGGAAACGGGGCAGGAACAGTGAGTGAC...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AAGAGAGGCAAGGCTGCGGAGTTTGTGGTGCCCGTAGTCACACCACACACACATCTGACTCGAGGGTCGTaGAGGGCTCTGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KRGKAAEFVVPVVTPHTHLTRGS*RALLSS
Trigger: GCTGGACAGCAGAGCCCTGCACGACCCTCGAGTCAG...ATGTGTGTGTGGTGTGACTACGGGCACCACAAACTCCGCAGCCTTGCCTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACATTCCTGGAGCCCGGCTaGAGCTCGTCCACACGGTAC +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTFLEPG*SSSTRY
Trigger: GTACCGTGTGGACGAGCTGCAGCCGGGCTCCAGGAA...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCTCAATGAGGTGCCGTaGCCATGTGTTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICILNEVP*PCVPGS
Trigger: GGAGCCGGGAACACATGGGCACGGCACCTCATTGAG...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCGCATGCTCAATGAGGTaGCGTGCCCATGTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSACSMR*RAHVFP
Trigger: CGGGAACACATGGGCACGGCACCTCATTGAGCATGC...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGCATGCTCAATGAGGTaGCGTGCCCATGTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDACSMR*RAHVFP
Trigger: CGGGAACACATGGGCACGGCACCTCATTGAGCATGC...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTGCTGCATATCCCAGGTaGCCGGCACATTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPAAYPR*PAHFLL
Trigger: CAACAGAAAATGTGCCGGGCACCTGGGATATGCAGC...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCAAGCAGCAGTCTTTGTaGCCACCTCCATCCCAATGG +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSKQQSL*PPPSQW
Trigger: CCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTT...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTTCCCCACGCCCCCATaGTTACACCTTGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGAFPTPP*LHLASG
Trigger: CCCAGAAGCAAGGTGTAAGCATGGGGGCGTGGGGAA...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCGGCCACCTTGAGCGTTaGTCCTGGGTTGCACTCCTA +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSGHLER*SWVALL
Trigger: TAGGAGTGCAACCCAGGAGCAACGCTCAAGGTGGCC...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTCGGAAGAAAGGTTTaGCCATGCCCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFVGRKV*PCPWAA
Trigger: TGCTGCCCAGGGGCATGGCCAAACCTTTCTTCCGAC...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCGTCGGAAGAAAGGTTTaGCCATGCCCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGAVGRKV*PCPWAA
Trigger: TGCTGCCCAGGGGCATGGCCAAACCTTTCTTCCGAC...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCGGCGGAGAAACTTCTaGAGTCGGAAGAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSIRRRNF*SRKKGL
Trigger: CAAACCTTTCTTCCGACTCCAGAAGTTTCTCCGCCG...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCATCACTCATGAAGTGGTaGAACCAGCGGCGACGCAAC +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPSLMKW*NQRRRN
Trigger: GTTGCGTCGCCGCTGGTTCCACCACTTCATGAGTGA...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTGAGTCACTCATGAAGTaGTGGAACCAGCGGCGACGC +
Preference number: 4 (lower is better)
Translates to: LWDVRHTARAAHPGSSSLESLMK*WNQRRR
Trigger: GCGTCGCCGCTGGTTCCACCACTTCATGAGTGACTC...AAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCGAGTCACTCATGAAGTaGTGGAACCAGCGGCGACGC +
Preference number: 4 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCESLMK*WNQRRR
Trigger: GCGTCGCCGCTGGTTCCACCACTTCATGAGTGACTC...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCTCCCCACGGTCACATTaGCCTGTATCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSSPRSH*PVSGSW
Trigger: CCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGA...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCTCCCCACGGTCACATTaGCCTGTATCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPSPRSH*PVSGSW
Trigger: CCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGA...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGTGCCTCAGGGTCCTaGCCACATACTGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGACASGS*PHTELS
Trigger: GGACAGCTCAGTATGTGGCCAGGACCCTGAGGCACA...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACAAGCCCCGTCCAGTTGTaGTCACGCAGGGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTSPVQL*SRRAWS
Trigger: GGACCAAGCCCTGCGTGACCACAACTGGACGGGGCT...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGGAGGTGTGGGTTCGTaGCCAGGTATGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WDVRHTARAAHPGSSSLCGGVGS*PGMCVH
Trigger: ATGGACACACATACCTGGCCACGAACCCACACCTCC...ACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCCACACCCCACGTGGGTaGCTTCTCTGCATCAAGACG +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGAHTPRG*LLCIKT
Trigger: CGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTG...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACGGCTGCATTTGTATCTaGGGGTGCCTGGCACACCCC +
Preference number: 4 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHGCICI*GCLAHP
Trigger: GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCC...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTGGTCCTGGGCTCCCCTaGAACTTCAGCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSGPGLP*NFSSCP
Trigger: AGGGCAGGAGCTGAAGTTCCAGGGGAGCCCAGGACC...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGCCTGGGAGTCACTCATaGAGTGGTGGAACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQPGSHS*SGGTSG
Trigger: GCCGCTGGTTCCACCACTTCATGAGTGACTCCCAGG...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATAGCATTCCCAGCCCCTaGGAATGGCCAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYSIPSP*EWPRGT
Trigger: AGTTCCCCTTGGCCATTCTCAGGGGCTGGGAATGCT...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCAGCATTCCCAGCCCCTaGGAATGGCCAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICISIPSP*EWPRGT
Trigger: AGTTCCCCTTGGCCATTCTCAGGGGCTGGGAATGCT...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGTCCTGGCCACATACTaGGCTGTCCATGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQVLATY*AVHGIP
Trigger: CGGGATGCCATGGACAGCTCAGTATGTGGCCAGGAC...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTAGGTCCTTTTCGCCCTTaGACCCTTTGTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLGPFRP*TLCCRG
Trigger: CCCTCTACAACAAAGGGTTCAAGGGCGAAAAGGACC...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp CTCCTGATACTAGGAAGAAATAGCTCCATCAGGGGCCTTCGCAGATTGGATGCCCACCGTTCGTCCCAGTaGGGCCACGGGCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LLILGRNSSIRGLRRLDAHRSSQ*GHGPEH
Trigger: ATGCTCAGGCCCGTGGCCTCACTGGGACGAACGGTG...GGCATCCAATCTGCGAAGGCCCCTGATGGAGCTATTTCTTCCTAGTATCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCTTTGTGTTCGCCTTGTaGTGTGTGTCTGTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSIFVFAL*CVSVVS
Trigger: GGACACAACAGACACACATCACAAGGCGAACACAAA...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCAGCTTTGAGCTGAACTaGGTTGATGCTATGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSSFELN*VDAMGG
Trigger: CCCTCCCATAGCATCAACTCAGTTCAGCTCAAAGCT...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCACAGTGTGGAAACTCCTaGGGGGTCTCAATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPQCGNS*GVSIAP
Trigger: AGGAGCAATTGAGACCCCTCAGGAGTTTCCACACTG...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGGGCCACAGGAGCTGGTaGTGCTCTACCTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FSASRRGYEPGVVSECLRGHRSW*CSTWRE
Trigger: CTCTCTCCAGGTAGAGCATCACCAGCTCCTGTGGCC...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp CACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCTCCCTATAGTGAAATaGACCCCTTTGGAGTCATCA +
Preference number: 4 (lower is better)
Translates to: HGQGRTPWKQQSLCPPPSLPIVK*TPLESS
Trigger: TGATGACTCCAAAGGGGTTCATTTCACTATAGGGAG...GGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp ACTCTTTCTGGGAACAAAAGCCCGAGCAAGTCCCCACGGTCACATTGGCCTGTACTGACTCGAGGGTCGTaGAGGGCTCTGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TLSGNKSPSKSPRSHWPVLTRGS*RALLSS
Trigger: GCTGGACAGCAGAGCCCTGCACGACCCTCGAGTCAG...TACAGGCCAATGTGACCGTGGGGACTTGCTCGGGCTTTTGTTCCCAGAAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCTCAATGAGGTGCCGTaGCCATGTGTTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSLNEVP*PCVPGS
Trigger: GGAGCCGGGAACACATGGGCACGGCACCTCATTGAG...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACGCATGCTCAATGAGGTaGCGTGCCCATGTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHACSMR*RAHVFP
Trigger: CGGGAACACATGGGCACGGCACCTCATTGAGCATGC...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCAGTCCGGCCACTCTTTaGTCTTCCAGTTGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPSPATL*SSSCGQ
Trigger: CTGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACT...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCCAGAGCATAAATGTCTaGCCGGCCCAGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPQSINV*PAQHPR
Trigger: TCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTG...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACCCCATCACTCTACTTaGCTGCACTCTTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLPHHST*LHSSLR
Trigger: CCTCAGTGAAGAGTGCAGGCAAGTAGAGTGATGGGG...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGGAGCAGGTGGTGGTaGCTCTTACTCCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSRSRWW*LLLRLP
Trigger: AGGAAGACGGAGTAAGAGGCACCACCACCTGCTCCT...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCATTACTTATCTCCAGTaGCCACAGGGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRTPWKQQSLCPPPSQWSITYLQ*PQGPAA
Trigger: AGCTGCAGGACCCTGTGGCCACTGGAGATAAGTAAT...GGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCATCCTTGCATCCTaGCTCCTGGCACCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SINVCPAQHPRVEHPDEQVILAS*LLAPAC
Trigger: ACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGAC...TTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCACTCCTGCCACTCTCGTaGGTTTTGACACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPLLPLS*VLTQMV
Trigger: CACCATCTGTGTCAAAACCCACGAGAGTGGCAGGAG...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGTCCGGATTAGCAGGATaGCTGAATCAAACATCTCAA +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGSGLAG*LNQTSQ
Trigger: TTGAGATGTTTGATTCAGCCATCCTGCTAATCCGGA...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CCA 90 bp TTGGCTGGTTGGGAGAGTATCCTCTTTACTGAGAAGCTAAGAGCTGTAGATGAGGCGGGGGCGGCGGCGTaGGCCAGGCCTATCATCTGG +
Preference number: 4 (lower is better)
Translates to: LAGWESILFTEKLRAVDEAGAAA*ARPIIW
Trigger: CCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGC...CTCATCTACAGCTCTTAGCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCGGAGGTGTGGGTTCGTaGCCAGGTATGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPGGVGS*PGMCVH
Trigger: ATGGACACACATACCTGGCCACGAACCCACACCTCC...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCACACCCCACGTGGGTaGCTTCTCTGCATCAAGACG +
Preference number: 4 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYHTPRG*LLCIKT
Trigger: CGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTG...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AGTCCCCACGGTCACATTGGCCTGTATCAGGGAGCTGGGGAAGGCATGTGTGATCTGGCACACCCCACGTaGGTGGCTTCTCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: SPHGHIGLYQGAGEGMCDLAHPT*VASLHQ
Trigger: TTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAG...ATCACACATGCCTTCCCCAGCTCCCTGATACAGGCCAATGTGACCGTGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCCCACCTCCATCCCAATaGTCCTTGCTGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPPPPSQ*SLLLRA
Trigger: TGCTCTGAGCAGCAAGGACCATTGGGATGGAGGTGG...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTATGCACAGACTTGGTGTaGCTGGTCTTGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLCTDLV*LVLRSV
Trigger: CACTGACCTCAAGACCAGCCACACCAAGTCTGTGCA...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCTGTGCTCATAGCGGGTaGCTCTGGGTTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPCAHSG*LWVPHH
Trigger: ATGATGGGGAACCCAGAGCCACCCGCTATGAGCACA...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp ACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATGAAGGGCAGCTCTACTaGGCCTTCCACCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: TCQVPGVLLYGLTQRKLDEGQLY*AFHPRP
Trigger: AGGCCGGGGGTGGAAGGCCCAGTAGAGCTGCCCTTC...ATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp CATTTGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGCCTTCCCAGCCTCCATaGCTTCCCCACTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: HLCSPCDVCLLCPGLLVRPSQPP*LPHCHA
Trigger: GGCGTGGCAGTGGGGAAGCCATGGAGGCTGGGAAGG...CCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTGCTCTCCCCAGACCCTaGCTCCAGTCCCGGTCACTC +
Preference number: 4 (lower is better)
Translates to: TCLHSSLRYRVIYKATGAALPRP*LQSRSL
Trigger: GAGTGACCGGGACTGGAGCCAGGGTCTGGGGAGAGC...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCCCCTAAGAACCAAGTaGCTACTGCTACTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQPLRTK*LLLLLR
Trigger: CCTTAAAAGTAGCAGTAGCCACTTGGTTCTTAGGGG...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574946.5
3UTR CAA 72 bp AGCGTTGCTCCTGGGTTGCACTCCTACCCTCCATACTaGAACCTCCTGGCCTCCACAGCCTCACTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SVAPGLHSYPPY*NLLASTASLVS
Trigger: GCTCACAAGTGAGGCTGTGGAGGCCAGGAGGTTCAAGTATGGAGGGTAGGAGTGCAACCCAGGAGCAACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS-3UTR TCA 90 bp ACTCTTTCTGGGAACAAAAGCCCGAGCAAGTCCCCACGGTCACATTGGCCTGTACCTGGGAGTCACTCATaGAGTGGTGGAACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TLSGNKSPSKSPRSHWPVPGSHS*SGGTSG
Trigger: GCCGCTGGTTCCACCACTTCATGAGTGACTCCCAGG...TACAGGCCAATGTGACCGTGGGGACTTGCTCGGGCTTTTGTTCCCAGAAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTTGGGGAAGGCATGTGTaGTGTTCTCTGGCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLAWGRHV*CSLAVG
Trigger: TCCGACTGCCAGAGAACATCACACATGCCTTCCCCA...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGAGCATTCCCAGCCCCTaGGAATGGCCAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQSIPSP*EWPRGT
Trigger: AGTTCCCCTTGGCCATTCTCAGGGGCTGGGAATGCT...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACAGTGGCATGCTCAATaGGGTGCCGTGCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: VVTPHTHLWDVRHTARAAQWHAQ*GAVPMC
Trigger: ACACATGGGCACGGCACCTCATTGAGCATGCCACTG...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACTCTCGTGGGTTTTaGCACAGATGGTGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: VVTPHTHLWDVRHTARAAHSRGF*HRWCVG
Trigger: GCCGACGCACCATCTGTGTCAAAACCCACGAGAGTG...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTATGTGTAGCATACATTaGCCCCCATCCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAAMCSIH*PPSQAG
Trigger: GCCAGCCTGGGATGGGGGTCAATGTATGCTACACAT...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACACCTACCCTCCATACTTaGACCTCCTGGCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTPTLHT*TSWPPQ
Trigger: CTGTGGAGGCCAGGAGGTTCAAGTATGGAGGGTAGG...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTCACTCACTGTTCCTaGCCCGTTTCCAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFVTHCS*PVSSRC
Trigger: ACACCTACTGGAAACGGGGCAGGAACAGTGAGTGAC...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GATTTGTTAGGCAGGAACCTCCTGTCTGTACAACGAGTGTCTTGCACAGGTGTCGGTCGTGCAGGGCTCTaGTGTCCAGCAAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: DLLGRNLLSVQRVSCTGVGRAGL*CPASPR
Trigger: GCGTGGGCTTGCTGGACAGCAGAGCCCTGCACGACC...GACACCTGTGCAAGACACTCGTTGTACAGACAGGAGGTTCCTGCCTAACAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp TGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCAAGCCCTTCTCGCCTTTaGACTCATGGTTACACTCTT +
Preference number: 4 (lower is better)
Translates to: CQTHGQGRTPWKQQSLCPSPSRL*THGYTL
Trigger: AAGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCT...TGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCAGTCCGGCCACTCTTTaGTCTTCCAGTTGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICISPATL*SSSCGQ
Trigger: CTGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACT...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCAGCCCCGTGGTGCGATTaGGTCACTCAGCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: MNPFGVITFQIPPMGFRAAPWCD*VTQRGR
Trigger: CCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCACGTCTGTGCGTGGCTaGATTTGTATCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICITSVRG*ICIWGC
Trigger: GCACCCCCAGATACAAATGCAGCCACGCACAGACGT...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCT +
Preference number: 4 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSICVLRL*VAAFVS
Trigger: AGATACAAATGCAGCCACGCACAGACGTAACACACA...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCAGAGCATAAATGTCTaGCCGGCCCAGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHQSINV*PAQHPR
Trigger: TCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTG...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp ACCTGCCAAGTGCCAGGTGTCTTGCTGTATGGACTGACTCAGCGTAAACTGGATGGGGGTGGTGGGCAGTaGACAGACTTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TCQVPGVLLYGLTQRKLDGGGGQ*TDLVWL
Trigger: CAGCCACACCAAGTCTGTGCACTGCCCACCACCCCC...ATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCAGTCATCCTTGCATCCTaGCTCCTGGCACCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VVTPHTHLWDVRHTARAAVILAS*LLAPAC
Trigger: ACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGAC...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACTCACTCATGAAGTGGTaGAACCAGCGGCGACGCAAC +
Preference number: 4 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHSLMKW*NQRRRN
Trigger: GTTGCGTCGCCGCTGGTTCCACCACTTCATGAGTGA...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTCAGCACACGCATCCTaGCAGTGGGAGACAGTCATC +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICISAHAS*QWETVI
Trigger: GATGACTGTCTCCCACTGCCAGGATGCGTGTGCTGA...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACATGTGTGATGTTCTCTaGCAGTCGGAAGCATCCGCG +
Preference number: 4 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDMCDVL*QSEASA
Trigger: CGCGGATGCTTCCGACTGCCAGAGAACATCACACAT...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAATGTGTGATGTTCTCTaGCAGTCGGAAGCATCCGCG +
Preference number: 4 (lower is better)
Translates to: PHTHLWDVRHTARAAHPGMCDVL*QSEASA
Trigger: CGCGGATGCTTCCGACTGCCAGAGAACATCACACAT...TCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGCCTGAGCATCAGAGTGCCAGGCCTATCATCTaGGCACATACTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VMCVCCVQVSLCGPEHQSARPII*AHTPWA
Trigger: TGCCCAGGGAGTATGTGCCCAGATGATAGGCCTGGC...ACTCTGATGCTCAGGCCCGCACAAGGAGACCTGGACACAACAGACACACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCATGTTACGTCTGTGCGTaGCTGCATTTGTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPCYVCA*LHLYLG
Trigger: CCCCAGATACAAATGCAGCCACGCACAGACGTAACA...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGCAGGAGCACACGGCCTaGCACCTGTGTGTTACGTCT +
Preference number: 4 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQQEHTA*HLCVTS
Trigger: AGACGTAACACACAGGTGCCAGGCCGTGTGCTCCTG...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACTCATGACCCCAGTGTaGGACCCCAGAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: VVTPHTHLWDVRHTARAALMTPV*DPRENR
Trigger: CCTGTTCTCTCTGGGGTCCCACACTGGGGTCATGAG...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACACCACGTAGGCAGACCTaGGATGAAGGCTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTPRRQT*DEGCED
Trigger: GTCCTCACAGCCTTCATCCCAGGTCTGCCTACGTGG...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGTCATTTACACATCACTaGGACTACCAGGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGSFTHH*DYQDVF
Trigger: AAACACATCCTGGTAGTCCCAGTGATGTGTAAATGA...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
3UTR CAA 72 bp ACTGCCACGCCTGACATTGCTTTCAAGGATCTAGGCTaGCTCTGGGATGCAGGTCTGCCCTGGCTATCCCGT +
Preference number: 4 (lower is better)
Translates to: TATPDIAFKDLG*LWDAGLPWLSR
Trigger: ACGGGATAGCCAGGGCAGACCTGCATCCCAGAGCAAGCCTAGATCCTTGAAAGCAATGTCAGGCGTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS-3UTR TCA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTGTCCTGGCCACATACTaGGCTGTCCATGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: TCLHSSLRYRVIYKATGAVLATY*AVHGIP
Trigger: CGGGATGCCATGGACAGCTCAGTATGTGGCCAGGAC...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCAGAGTCGAACACCCTaGCGAGCAAGTCTATGCCAG +
Preference number: 4 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSQSRTP*RASLCQ
Trigger: CTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTG...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp ATAGCGGGTGGCTCTGGGTTCCCCATCATCAGGCTAGGAAGCAGAGGGTCAGGAGGTACCTGGCAGCAGTaGATGTACCAATCCAACTAC +
Preference number: 4 (lower is better)
Translates to: IAGGSGFPIIRLGSRGSGGTWQQ*MYQSNY
Trigger: GTAGTTGGATTGGTACATTCACTGCTGCCAGGTACC...TCCTGACCCTCTGCTTCCTAGCCTGATGATGGGGAACCCAGAGCCACCCGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp CACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCGGGGAGAATGCATTCTaGTATGCAAACATTATCACA +
Preference number: 4 (lower is better)
Translates to: HGQGRTPWKQQSLCPPPSGENAF*YANIIT
Trigger: TGTGATAATGTTTGCATATCAGAATGCATTCTCCCC...GGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCATTATGGATGGGAAACTaGGACTGGAGATGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: CQTHGQGRTPWKQQSLCPLWMGN*DWRWEK
Trigger: CTTTTCCCATCTCCAGTCTCAGTTTCCCATCCATAA...TGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCAGACCTCACAGTATTCTaGCAGCCTCTGTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VVTPHTHLWDVRHTARAADLTVF*QPLCLR
Trigger: CCTGAGGCACAGAGGCTGGCAGAATACTGTGAGGTC...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCCTTTGCTCTTCCAGTTaGGGTCAGCTGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGALCSSS*GQLHIP
Trigger: TGGGATATGCAGCTGACCGCAACTGGAAGAGCAAAG...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCTGTGTGTTACGTCTGTaGGTGGCTGCATTTGTATCT +
Preference number: 4 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSCVLRL*VAAFVS
Trigger: AGATACAAATGCAGCCACGCACAGACGTAACACACA...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTAAGCAGCAGTCTTTGTaGCCACCTCCATCCCAATGG +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLAKQQSL*PPPSQW
Trigger: CCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTT...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTGCGTTGCTCCTGGGTTaGACTCCTACCCTCCATACT +
Preference number: 4 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSALLLG*TPTLHT
Trigger: AGTATGGAGGGTAGGAGTGCAACCCAGGAGCAACGC...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp CATTTGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGCGCCACAATCCTCCCTaGATCTCGGCCACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HLCSPCDVCLLCPGLLVRRHNPP*ISATLS
Trigger: GCTCAAGGTGGCCGAGATGCAGGGAGGATTGTGGCG...CCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCCTTCGCAGATTGGATaGCGAAGCTATCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIPSQIG*RSYPEP
Trigger: TGGCTCAGGATAGCTTCGGCATCCAATCTGCGAAGG...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTGGAGTACCTGCCAAGTaGCAGGTGTCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAAGVPAK*QVSCCM
Trigger: CATACAGCAAGACACCTGGCACTTGGCAGGTACTCC...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCTTCAGAGTCCTCTCGTaGCCATCGTCACTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSFRVLS*PSSLKH
Trigger: ATGCTTCAGTGACGATGGCCACGAGAGGACTCTGAA...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACTCGCCTTTGCACTCATaGTTACACTCTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHSPLHS*LHSSSP
Trigger: GGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGCGA...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTTCGCCTTTGCACTCATaGTTACACTCTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAASPLHS*LHSSSP
Trigger: GGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGCGA...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCTCCTGCCACTCTCGTaGGTTTTGACACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHLLPLS*VLTQMV
Trigger: CACCATCTGTGTCAAAACCCACGAGAGTGGCAGGAG...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTGTTACGTCTGTGCGTaGCTGCATTTGTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCCYVCA*LHLYLG
Trigger: CCCCAGATACAAATGCAGCCACGCACAGACGTAACA...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGGAGGAAGCTTCCATCTaGGGAAGGGCAGCTCTACTG +
Preference number: 4 (lower is better)
Translates to: FSASRRGYEPGVVSECLREEASI*GRAALL
Trigger: CAGTAGAGCTGCCCTTCCCCAGATGGAAGCTTCCTC...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATACTGAGTTGATGCTATaGGAGGGTCAAGAACAGCTT +
Preference number: 4 (lower is better)
Translates to: ARAAHPGSSSLCAHLHPNTELML*EGQEQL
Trigger: AAGCTGTTCTTGACCCTCCCATAGCATCAACTCAGT...ATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACACTACCAGGAAAAGCCTaGTGCTGTTGCTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTLPGKA*CCCSPQ
Trigger: CTGGGGAGAGCAACAGCACCAGGCTTTTCCTGGTAG...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TTCCCCATCATCAGGCTAGGAAGCAGAGGGTCAGGATATCTCAACGTCCTGCTCCGTGGCCATCGTCACTaGAGCATCCAATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: FPIIRLGSRGSGYLNVLLRGHRH*SIQCRC
Trigger: GCACCTACATTGGATGCTTCAGTGACGATGGCCACG...GAGCAGGACGTTGAGATATCCTGACCCTCTGCTTCCTAGCCTGATGATGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TGCATATCCCAGGTGCCCGGCACATTTTCTGTTGAATTCTGCCACCAGGGACCTTGGGGAAGGCATGTGTaGTGTTCTCTGGCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: CISQVPGTFSVEFCHQGPWGRHV*CSLAVG
Trigger: TCCGACTGCCAGAGAACATCACACATGCCTTCCCCA...AGGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCGGGCACCTGGGATATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR TCA 90 bp CATTTGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGCAGTGGCATGCTCAATaGGGTGCCGTGCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: HLCSPCDVCLLCPGLLVRQWHAQ*GAVPMC
Trigger: ACACATGGGCACGGCACCTCATTGAGCATGCCACTG...CCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp AAGAGAGGCAAGGCTGCGGAGTTTGTGGTGCCCGTAGTCACACCACACACACATCGGCACATTTTCTGTTaGATTCTGCCACCAGGGACC +
Preference number: 4 (lower is better)
Translates to: KRGKAAEFVVPVVTPHTHRHIFC*ILPPGT
Trigger: GGTCCCTGGTGGCAGAATTCAACAGAAAATGTGCCG...ATGTGTGTGTGGTGTGACTACGGGCACCACAAACTCCGCAGCCTTGCCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGAGGGCTGCATATCCCAGGTaGCCGGCACATTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: CVRLVMCVCCVQVSLCGRAAYPR*PAHFLL
Trigger: CAACAGAAAATGTGCCGGGCACCTGGGATATGCAGC...CCTCCCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACATCCCAATGGTCCTTaGTGCTCAGAGCATAAATGT +
Preference number: 4 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLHPNGP*CSEHKC
Trigger: ACATTTATGCTCTGAGCAGCAAGGACCATTGGGATG...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACAAAGCAGCAGTCTTTGTaGCCACCTCCATCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTKQQSL*PPPSQW
Trigger: CCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTT...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACATTACTTATCTCCAGTaGCCACAGGGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHITYLQ*PQGPAA
Trigger: AGCTGCAGGACCCTGTGGCCACTGGAGATAAGTAAT...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGAAGGGGAACTCTTTCTaGGAACAAAAGCCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: GLAPVCYVCAWLHLYLGVKGNSF*EQKPEQ
Trigger: TTGCTCGGGCTTTTGTTCCCAGAAAGAGTTCCCCTT...CACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAAAGCTTTGTCCAAGATaGCAGATAAGAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPKLCPR*QIRAGT
Trigger: AGTCCCAGCTCTTATCTGCCATCTTGGACAAAGCTT...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCATTCCCAAACAGAAATaGGGGGTTGCTGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPIPKQK*GVAGKG
Trigger: TCCTTTCCCAGCAACCCCCCATTTCTGTTTGGGAAT...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACACCGCCCCTCATCTCCTaGCGCAGAAATGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTPPLIS*RRNVLL
Trigger: AAGCAAAACATTTCTGCGCCAGGAGATGAGGGGCGG...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR TCA 90 bp CATTTGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGCAGAGTCGAACACCCTaGCGAGCAAGTCTATGCCAG +
Preference number: 4 (lower is better)
Translates to: HLCSPCDVCLLCPGLLVRQSRTP*RASLCQ
Trigger: CTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTG...CCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp GATGGGAAACTGAGACTGGAGATGGGAAAAGCTTTGTCCAAGATGGCAGATAAGAGGACCACTGCCAGCTaGCAGGGCCGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DGKLRLEMGKALSKMADKRTTAS*QGRCSS
Trigger: GGAAGAGCAACGGCCCTGTCAGCTGGCAGTGGTCCT...CTTATCTGCCATCTTGGACAAAGCTTTTCCCATCTCCAGTCTCAGTTTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGCTAAGAGCTGTAGATaGGACCTAACTTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SARPSIPESNTLTSKSMPAKSCR*DLTWRK
Trigger: TTTTCTCCAAGTTAGGTCTCATCTACAGCTCTTAGC...TGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp CATTTGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGACGTCTGTGCGTGGCTaGATTTGTATCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: HLCSPCDVCLLCPGLLVRTSVRG*ICIWGC
Trigger: GCACCCCCAGATACAAATGCAGCCACGCACAGACGT...CCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCCCAATGGTCCTTGCTaGTCAGAGCATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIPNGPC*SEHKCL
Trigger: CAGACATTTATGCTCTGAGCAGCAAGGACCATTGGG...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTCCCAATGGTCCTTGCTaGTCAGAGCATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAAPNGPC*SEHKCL
Trigger: CAGACATTTATGCTCTGAGCAGCAAGGACCATTGGG...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCCATTTGCCACACTTCTaGCCTACATACAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPHLPHF*PTYRSA
Trigger: AGCTGATCTGTATGTAGGGCAGAAGTGTGGCAAATG...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp CATTTGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGTGTCTGAGGAGGTGTaGGTTCGTGGCCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: HLCSPCDVCLLCPGLLVRVSEEV*VRGQVC
Trigger: ACATACCTGGCCACGAACCCACACCTCCTCAGACAC...CCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTTGTTACGTCTGTGCGTaGCTGCATTTGTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSCYVCA*LHLYLG
Trigger: CCCCAGATACAAATGCAGCCACGCACAGACGTAACA...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTCAGCTTTTATTCCTTaGCTGGTTGGGAGAGTATCC +
Preference number: 4 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPSAFIP*LVGRVS
Trigger: GGATACTCTCCCAACCAGCCAAGGAATAAAAGCTGA...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGATGGAAGGTGTCATTaGCTTAGTCCAGGACATGTA +
Preference number: 4 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDDGRCH*LSPGHV
Trigger: TACATGTCCTGGACTAAGCCAATGACACCTTCCATC...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
3UTR CAA 72 bp AGTCGTAACATCAACCTCAGCACTTCTCCTCTCCTCTaGGGGCCCCCTAAGAACCAAGTGGCTACTGCTACT +
Preference number: 4 (lower is better)
Translates to: SRNINLSTSPLL*GPPKNQVATAT
Trigger: AGTAGCAGTAGCCACTTGGTTCTTAGGGGGCCCCAAGAGGAGAGGAGAAGTGCTGAGGTTGATGTTACGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS-3UTR TCA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTTTTCTAGCTTTGAGCTaGACTGAGTTGATGCTATGG +
Preference number: 4 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFFLALS*TELMLW
Trigger: CCATAGCATCAACTCAGTTCAGCTCAAAGCTAGAAA...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTTCTTGCTGTATGGACTaGCTCAGCGTAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSSCCMD*LSVNWM
Trigger: CATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGA...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACAGTTCTAACCGGTTCCTaGTGCATTTGCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTVLTGS*CICHTS
Trigger: AGAAGTGTGGCAAATGCATCAGGAACCGGTTAGAAC...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACATTTCACCAAGGACTTaGTCTCTTTCTGCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDISPRT*SLSASQ
Trigger: TTGAGAGGCAGAAAGAGATCAAGTCCTTGGTGAAAT...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGCATCCCAATGGTCCTTaGTGCTCAGAGCATAAATGT +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLHPNGP*CSEHKC
Trigger: ACATTTATGCTCTGAGCAGCAAGGACCATTGGGATG...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR GCA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGACTTGATCTCTTTCTaGCTCTCAACTCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLADLISF*LSTLPS
Trigger: TGAAGGGAGAGTTGAGAGGCAGAAAGAGATCAAGTC...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp GTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGCCTGAGCATCAGAGTGGCGCAGAAATGTTTTaGTTTTGCCTCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VMCVCCVQVSLCGPEHQSGAEMF*FCLCLC
Trigger: ACAGAGGCAGAGGCAAAAGCAAAACATTTCTGCGCC...ACTCTGATGCTCAGGCCCGCACAAGGAGACCTGGACACAACAGACACACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CCA 90 bp TTCTCTGCATCAAGACGGGGCTATGAGCCTGGAGTGGTGTCTGAGTGTCTGAGGAAGGGGAACTCTTTCTaGGAACAAAAGCCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: FSASRRGYEPGVVSECLRKGNSF*EQKPEQ
Trigger: TTGCTCGGGCTTTTGTTCCCAGAAAGAGTTCCCCTT...CCTCAGACACTCAGACACCACTCCAGGCTCATAGCCCCGTCTTGATGCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR TCA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCATGCCGAAGCTATCCTaGGCCAATAAACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPMPKLS*ANKHFQ
Trigger: TTGAAAATGTTTATTGGCTCAGGATAGCTTCGGCAT...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCCAACTCACCCAATATTaGGTGGTGATAAATAGGAAG +
Preference number: 4 (lower is better)
Translates to: THLWDVRHTARAAHPGSSQLTQY*VVINRK
Trigger: CTTCCTATTTATCACCACTCAATATTGGGTGAGTTG...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp ACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCTCTCTGGCAGATCATATaGATTCCCAAACAGAAATGG +
Preference number: 4 (lower is better)
Translates to: TLEAAVFVPTSIPMVLAALWQII*IPKQKW
Trigger: CCATTTCTGTTTGGGAATTCATATGATCTGCCAGAG...AGCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCACCACAGAGGCCAGTGTaGAACCGGATCGCCACAATC +
Preference number: 4 (lower is better)
Translates to: MNPFGVITFQIPPMGFRAPQRPV*NRIATI
Trigger: GATTGTGGCGATCCGGTTGCACACTGGCCTCTGTGG...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp GATGGGAAACTGAGACTGGAGATGGGAAAAGCTTTGTCCAAGATGGCAGATAAGAGGCTTGCTCTGGGATaGAGGTCTGCCCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: DGKLRLEMGKALSKMADKRLALG*RSALAI
Trigger: GATAGCCAGGGCAGACCTGCATCCCAGAGCAAGCCT...CTTATCTGCCATCTTGGACAAAGCTTTTCCCATCTCCAGTCTCAGTTTCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTCTTTTAAGGGGAGAATaGATTCTGATATGCAAACAT +
Preference number: 4 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPLLRGE*ILICKH
Trigger: ATGTTTGCATATCAGAATGCATTCTCCCCTTAAAAG...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACTCCGGATTAGCAGGATaGCTGAATCAAACATCTCAA +
Preference number: 4 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHSGLAG*LNQTSQ
Trigger: TTGAGATGTTTGATTCAGCCATCCTGCTAATCCGGA...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATTCCGGATTAGCAGGATaGCTGAATCAAACATCTCAA +
Preference number: 4 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYSGLAG*LNQTSQ
Trigger: TTGAGATGTTTGATTCAGCCATCCTGCTAATCCGGA...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCAATCCCAGGAAGGATTTaGAGGCCACCAGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: MNPFGVITFQIPPMGFRAIPGRI*RPPGAQ
Trigger: CTGTGCCCCTGGTGGCCTCCAAATCCTTCCTGGGAT...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
3UTR CAA 72 bp TCAACATCCAGGAGTACCTGCCAAGTGCCAGGTGTCTaGCTGTATGGACTGACTCAGCGTAAACTGGATGGA +
Preference number: 4 (lower is better)
Translates to: STSRSTCQVPGV*LYGLTQRKLDG
Trigger: TCCATCCAGTTTACGCTGAGTCAGTCCATACAGCAAGACACCTGGCACTTGGCAGGTACTCCTGGATGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS-3UTR TCA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCACGAGGCGTAGCTGTTaGCAAAGTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSTRRSC*QSPATL
Trigger: AAGAGTGGCCGGACTTTGTCAACAGCTACGCCTCGT...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR TCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGTTGGTTTTTCCAAATTaGTCCACAACGGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLLVFPN*STTGDE
Trigger: TTCATCTCCCGTTGTGGATCAATTTGGAAAAACCAA...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp CATTTGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGAGCCCTTCTCGCCTTTaGACTCATGGTTACACTCTT +
Preference number: 4 (lower is better)
Translates to: HLCSPCDVCLLCPGLLVRSPSRL*THGYTL
Trigger: AAGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCT...CCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CCA 90 bp TGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGTTGGAGAAAAACAAATaGACTTTCCTGCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: WHLCVTSVRGCICIWGCLLEKNK*TFLQAQ
Trigger: CTGTGCTTGCAGGAAAGTCCATTTGTTTTTCTCCAA...CAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACTTTTATTCCTTGGCTaGTTGGGAGAGTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: VVTPHTHLWDVRHTARAALLFLG*LGEYPL
Trigger: AAGAGGATACTCTCCCAACCAGCCAAGGAATAAAAG...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCGCAGAAATCCGGAGCTaGCTGCTAAGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSAEIRS*LLRCSQ
Trigger: CTGGGAGCATCTTAGCAGCCAGCTCCGGATTTCTGC...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CCA 90 bp ACTCTTTCTGGGAACAAAAGCCCGAGCAAGTCCCCACGGTCACATTGGCCTGTATCCGGATTAGCAGGATaGCTGAATCAAACATCTCAA +
Preference number: 4 (lower is better)
Translates to: TLSGNKSPSKSPRSHWPVSGLAG*LNQTSQ
Trigger: TTGAGATGTTTGATTCAGCCATCCTGCTAATCCGGA...TACAGGCCAATGTGACCGTGGGGACTTGCTCGGGCTTTTGTTCCCAGAAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR GCA 90 bp ACTTGCCTGCACTCTTCACTGAGGTACAGAGTCATCTACAAGGCCACAGGAGCTTGTCCCAAGAATTCTTaGAGTCGTAACATCAACCTC +
Preference number: 4 (lower is better)
Translates to: TCLHSSLRYRVIYKATGACPKNS*SRNINL
Trigger: GAGGTTGATGTTACGACTGCAAGAATTCTTGGGACA...AGCTCCTGTGGCCTTGTAGATGACTCTGTACCTCAGTGAAGAGTGCAGGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCAGCCGTTGCTCTTCCTTaGTCATCAACATCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSAVALP*SSTSRS
Trigger: ACTCCTGGATGTTGATGAGCAAGGAAGAGCAACGGC...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
3UTR CAA 72 bp GTTTCTCTGTTCTGTTCTAACCGGTTCCTGATGCATTaGCCACACTTCTGCCCTACATACAGATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSLFCSNRFLMH*PHFCPTYRSAF
Trigger: AAAAGCTGATCTGTATGTAGGGCAGAAGTGTGGCAAATGCATCAGGAACCGGTTAGAACAGAACAGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
3UTR CAA 72 bp ACAGGTTTGTGTAACTCCACAGGCTTGCTATTAAAGTaGGAATCTGTAGACAGTCAGGGTTTCTCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TGLCNSTGLLLK*ESVDSQGFSVL
Trigger: CAGAACAGAGAAACCCTGACTGTCTACAGATTCCAACTTTAATAGCAAGCCTGTGGAGTTACACAAACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS-3UTR TCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCAGAGTATCCTCTTTACTaGGAAGCTAAGAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSEYPLY*EAKSCR
Trigger: TCTACAGCTCTTAGCTTCTCAGTAAAGAGGATACTC...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR GCA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCAAGGAATGAATGTGGATaGAATCAGCAAGACCTACCA +
Preference number: 4 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSRNECG*NQQDLP
Trigger: TGGTAGGTCTTGCTGATTGCATCCACATTCATTCCT...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
3UTR CAA 72 bp AAAAAGTCCAGAGGTAAGGCCAATCTCAAGCAAGGCTaGATCCTGTACTTAAACAATTTCACCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: KKSRGKANLKQG*ILYLNNFTKDL
Trigger: CAAGTCCTTGGTGAAATTGTTTAAGTACAGGATCAAGCCTTGCTTGAGATTGGCCTTACCTCTGGACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317744.9
ENST00000574946.5
CDS GCA 90 bp GCCCAGCGCCACGGCGGCCACTGGCAAGGTCTGCAGGGGGCCGGGTaGCCGGGGGCCCTGTGGGAGAGCCACGCGGACCCGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: AQRHGGHWQGLQGAG*PGALWESHADPLQQ
Trigger: CTGCTGCAGCGGGTCCGCGTGGCTCTCCCACAGGGCCCCCGGGCACCCGGCCCCCTGCAGACCTTGCCAGTGGCCGCCGTGGCGCTGGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS CCA 90 bp GGCTCTGCTGTCCAGCAAGCCCACGCCCAGCGCCACGGCGGCCACTaGCAAGGTCTGCAGGGGGCCGGGTGCCCGGGGGCCCTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GSAVQQAHAQRHGGH*QGLQGAGCPGALWE
Trigger: CTCCCACAGGGCCCCCGGGCACCCGGCCCCCTGCAGACCTTGCCAGTGGCCGCCGTGGCGCTGGGCGTGGGCTTGCTGGACAGCAGAGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS-3UTR CAA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGAGCCCCGTGGTGCGATaGCGTCACTCAGCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARSPVVR*RHSAGA
Trigger: CGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGGCAGCCCCGTCCAGTaGTGGTCACGCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQGSPVQ*WSRRAW
Trigger: CCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCC...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGGGCAGCCCCGTCCAGTaGTGGTCACGCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGGSPVQ*WSRRAW
Trigger: CCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCC...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCCGCTTCCCGTACTaGAGCCAGTCCAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWASRFPY*SQSRTC
Trigger: GCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGCT...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGGTGGTCACGCAGGGCTaGGTCCACCGTCCGGATGTA +
Preference number: 5 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARVVTQG*VHRPDV
Trigger: TACATCCGGACGGTGGACCAAGCCCTGCGTGACCAC...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCTGTGTCCAGGTCTCCTaGTGCGGGAGGCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGCVQVS*CGRQHQ
Trigger: CTGGTGCTGCCTCCCGCACAAGGAGACCTGGACACA...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGAGTCGGAAGAAAGGTTaGGCCATGCCCCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GSAAPWCDCVTQRGRRRGSRKKG*AMPLGS
Trigger: GCTGCCCAGGGGCATGGCCAAACCTTTCTTCCGACT...CCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCGTCCCCACGGTCACATaGGCCTGTATCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ERSPVVRLRHSAGAAAWAVPTVT*ACIREL
Trigger: CAGCTCCCTGATACAGGCCAATGTGACCGTGGGGAC...GGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GGCTCAGGGTCGTGGGAGCGCCGGCCGCGCCGCCGGAAGCTGCCCTCCTTGTTGAGCCGCTTCCCGTACTaGAGCCAGTCCAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: GSGSWERRPRRRKLPSLLSRFPY*SQSRTC
Trigger: GCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGCT...CAACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCCTGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CAA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAAGTCGGAAGAAAGGTTaGGCCATGCCCCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLSRKKG*AMPLGS
Trigger: GCTGCCCAGGGGCATGGCCAAACCTTTCTTCCGACT...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CAA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCACTCTCGTGGGTTTaGACACAGATGGTGCGTCGG +
Preference number: 5 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARPLSWV*TQMVRR
Trigger: CCGACGCACCATCTGTGTCAAAACCCACGAGAGTGG...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCAAGCTGCCCTCCTTGTaGTTCTCCACGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GAQPRGAIASLSGGGGVGKLPSL*FSTQSS
Trigger: GCTGCTCTGCGTGGAGAACAACAAGGAGGGCAGCTT...GCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGAAGCTGCCCTCCTTGTaGTTCTCCACGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQKLPSL*FSTQSS
Trigger: GCTGCTCTGCGTGGAGAACAACAAGGAGGGCAGCTT...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp AGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCACGGAAGCTGCCCTCCTaGTTGTTCTCCACGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SAAPWCDCVTQRGRRRGPRKLPS*LFSTQS
Trigger: GCTCTGCGTGGAGAACAACAAGGAGGGCAGCTTCCG...TGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS TCA 90 bp TGGCAGCCTCGGGGCCCAGGGCGGGCGGTCCCTGGGAGTCACTCATaGAGTGGTGGAACCAGCGGCGACGCAACTGACGCAGCTCCGAGT +
Preference number: 5 (lower is better)
Translates to: WQPRGPGRAVPGSHS*SGGTSGDATDAAPS
Trigger: ACTCGGAGCTGCGTCAGTTGCGTCGCCGCTGGTTCCACCACTTCATGAGTGACTCCCAGGGACCGCCCGCCCTGGGCCCCGAGGCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS-3UTR CAA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTCCACTCTCGTGGGTTTaGACACAGATGGTGCGTCGG +
Preference number: 5 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPPLSWV*TQMVRR
Trigger: CCGACGCACCATCTGTGTCAAAACCCACGAGAGTGG...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GGCTCAGGGTCGTGGGAGCGCCGGCCGCGCCGCCGGAAGCTGCCCTCCTTGTTGTCGCTCACAGACACGTaGAGGAAGGCCACCATCTCC +
Preference number: 5 (lower is better)
Translates to: GSGSWERRPRRRKLPSLLSLTDT*RKATIS
Trigger: GGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCGA...CAACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCCTGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CAA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGCAGCTGACAGGGCCGTaGCTCTTCCTTGCTCATCAA +
Preference number: 5 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQQLTGP*LFLAHQ
Trigger: TTGATGAGCAAGGAAGAGCAACGGCCCTGTCAGCTG...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGTCTTTGCTCTTCCAGTaGCGGTCAGCTGCATATCCC +
Preference number: 5 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARSLLFQ*RSAAYP
Trigger: GGGATATGCAGCTGACCGCAACTGGAAGAGCAAAGA...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTAAAGTCCGGCCACTCTTaGCTCTTCCAGTTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: APWCDCVTQRGRRRGPGLKSGHS*LFQLRS
Trigger: TGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACTT...TAGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS GCA 90 bp CAGGGCCTCCGGAGGCGTCATCCTTGCATCCTGGCTCCTGGCACCTaGCTGTGCTCGCCTGGGGTCACTCACTGTTCCTGCCCCGTTTCC +
Preference number: 5 (lower is better)
Translates to: QGLRRRHPCILAPGT*LCSPGVTHCSCPVS
Trigger: GGAAACGGGGCAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCGGAGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 90 bp GCCCCACCCTGTTCCCCCAAAGCCGCCAAGTCACAGCATCTGCCCTaGTCTGCCATGTGCACCGGTGGACCCTGTCCTCACCCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: APPCSPKAAKSQHLP*SAMCTGGPCPHPEL
Trigger: CAGCTCCGGGTGAGGACAGGGTCCACCGGTGCACATGGCAGAGCAGGGCAGATGCTGTGACTTGGCGGCTTTGGGGGAACAGGGTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS GCA 90 bp GAGGAGCCCCACCCTGTTCCCCCAAAGCCGCCAAGTCACAGCATCTaGCCTGCTCTGCCATGTGCACCGGTGGACCCTGTCCTCACCCGG +
Preference number: 5 (lower is better)
Translates to: EEPHPVPPKPPSHSI*PALPCAPVDPVLTR
Trigger: CCGGGTGAGGACAGGGTCCACCGGTGCACATGGCAGAGCAGGGCAGATGCTGTGACTTGGCGGCTTTGGGGGAACAGGGTGGGGCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS CCA 90 bp GGTGGGAGTGAGGCCAGGGCCTCCGGAGGCGTCATCCTTGCATCCTaGCTCCTGGCACCTGCCTGTGCTCGCCTGGGGTCACTCACTGTT +
Preference number: 5 (lower is better)
Translates to: GGSEARASGGVILAS*LLAPACARLGSLTV
Trigger: AACAGTGAGTGACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCGGAGGCCCTGGCCTCACTCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS-3UTR CAA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGTGTACAACGAGTGTCTaGCACAGGTGTCTGGTAGAC +
Preference number: 5 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARCTTSV*HRCLVD
Trigger: GTCTACCAGACACCTGTGCAAGACACTCGTTGTACA...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCGGCAGCCCCGTCCAGTaGTGGTCACGCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSIGSPVQ*WSRRAW
Trigger: CCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCC...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATAGCCCCGTGGTGCGATaGCGTCACTCAGCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: ARAAHPGSSSLCAHLHPNSPVVR*RHSAGA
Trigger: CGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT...ATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS CCA 90 bp GCCTTTGCACTCATGGTTACACTCTTCCAGCCCCACGCTCACCGCTaGCAGCCGGTTCCCGCAGTAACACTCCGCCCCGGCCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: AFALMVTLFQPHAHR*QPVPAVTLRPGLQA
Trigger: GGCTTGGAGGCCGGGGCGGAGTGTTACTGCGGGAACCGGCTGCCAGCGGTGAGCGTGGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574232.5
ENST00000574946.5
CDS-3UTR CAA 90 bp AGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGCCTTGTGATGTGTGTCTGTaGTGTCCAGGTCTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: SPVVRLRHSAGAAAWARPCDVCL*CPGLLV
Trigger: CACAAGGAGACCTGGACACAACAGACACACATCACA...AGGCCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS GCA 90 bp CTCCGGAGGCGTCATCCTTGCATCCTGGCTCCTGGCACCTGCCTGTaGTCGCCTGGGGTCACTCACTGTTCCTGCCCCGTTTCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: LRRRHPCILAPGTCL*SPGVTHCSCPVSSR
Trigger: CCTACTGGAAACGGGGCAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 90 bp CGGAGAGCCGGTCCACAGCCCCGCACACAGAGCCCTTCTCGCCTTTaGACTCATGGTTACACTCTTCCAGCCCCACGCTCACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RRAGPQPRTQSPSRL*THGYTLPAPRSPLA
Trigger: TGCCAGCGGTGAGCGTGGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCTCTGTGTGCGGGGCTGTGGACCGGCTCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574232.5
ENST00000574946.5
CDS-3UTR CAA 90 bp CGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGGACAAACACTTTGGATTaGTTAGGCAGGAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: RSPVVRLRHSAGAAAWARTNTLD*LGRNLL
Trigger: CAGGAGGTTCCTGCCTAACAAATCCAAAGTGTTTGT...CCTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGTCGCTCACAGACACGTaGAGGAAGGCCACCATCTCC +
Preference number: 5 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGSLTDT*RKATIS
Trigger: GGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCGA...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp GGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGAGCCCCGTGGTGCGATaGCGTCACTCAGCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: GLAPVCYVCAWLHLYLGVSPVVR*RHSAGA
Trigger: CGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT...CACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS GCA 90 bp TCCCCCAAAGCCGCCAAGTCACAGCATCTGCCCTGCTCTGCCATGTaGACCGGTGGACCCTGTCCTCACCCGGAGCTGGCTGCTAAGATG +
Preference number: 5 (lower is better)
Translates to: SPKAAKSQHLPCSAM*TGGPCPHPELAAKM
Trigger: CATCTTAGCAGCCAGCTCCGGGTGAGGACAGGGTCCACCGGTGCACATGGCAGAGCAGGGCAGATGCTGTGACTTGGCGGCTTTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS CCA 90 bp CCTGCTCTGCCATGTGCACCGGTGGACCCTGTCCTCACCCGGAGCTaGCTGCTAAGATGCTCCCAGAAGCTGAGGACAGCAGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PALPCAPVDPVLTRS*LLRCSQKLRTAEAA
Trigger: TGCTGCCTCTGCTGTCCTCAGCTTCTGGGAGCATCTTAGCAGCCAGCTCCGGGTGAGGACAGGGTCCACCGGTGCACATGGCAGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS-3UTR CAA 90 bp ACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCCCACTCTCGTGGGTTTaGACACAGATGGTGCGTCGG +
Preference number: 5 (lower is better)
Translates to: TARAAHPGSSSLCAHLHPPLSWV*TQMVRR
Trigger: CCGACGCACCATCTGTGTCAAAACCCACGAGAGTGG...GGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATAGCCGCTTCCCGTACTaGAGCCAGTCCAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: ARAAHPGSSSLCAHLHPNSRFPY*SQSRTC
Trigger: GCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGCT...ATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TGCCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCGTGGTCACGCAGGGCTaGGTCCACCGTCCGGATGTA +
Preference number: 5 (lower is better)
Translates to: CLAHPTWVASLHQDGAMSVVTQG*VHRPDV
Trigger: TACATCCGGACGGTGGACCAAGCCCTGCGTGACCAC...GCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCGGCAGCCCCGTCCAGTaGTGGTCACGCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: THLWDVRHTARAAHPGSSGSPVQ*WSRRAW
Trigger: CCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCC...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GGCCACGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTTGTACAACGAGTGTCTaGCACAGGTGTCTGGTAGAC +
Preference number: 5 (lower is better)
Translates to: GHGPEHQSGERSPVVRLRCTTSV*HRCLVD
Trigger: GTCTACCAGACACCTGTGCAAGACACTCGTTGTACA...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TTGTGCGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTAAGTCCGGCCACTCTTaGCTCTTCCAGTTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: LCGPEHQSGERSPVVRLRKSGHS*LFQLRS
Trigger: TGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACTT...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CAA 90 bp TGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACGGAAGCTGCCCTCCTaGTTGTTCTCCACGCAGAGC +
Preference number: 5 (lower is better)
Translates to: CQTHGQGRTPWKQQSLCPRKLPS*LFSTQS
Trigger: GCTCTGCGTGGAGAACAACAAGGAGGGCAGCTTCCG...TGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp CGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTATGTGTCCAGGTCTCCTaGTGCGGGAGGCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: RPSIPESNTLTSKSMPGLCVQVS*CGRQHQ
Trigger: CTGGTGCTGCCTCCCGCACAAGGAGACCTGGACACA...TAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCATGCATCTCGGCCACCTaGAGCGTTGCTCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: CQTHGQGRTPWKQQSLCPCISAT*SVAPGL
Trigger: CAACCCAGGAGCAACGCTCAAGGTGGCCGAGATGCA...TGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp AGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCAAGTGCCAGGTGTCTaGCTGTATGGACTGACTCAG +
Preference number: 5 (lower is better)
Translates to: SIRVGSAAPWCDCVTQRGQVPGV*LYGLTQ
Trigger: CTGAGTCAGTCCATACAGCAAGACACCTGGCACTTG...CCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp GCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGGCGGCGGCGTGGGCCAGTGTAACTCCACAGGCTaGCTATTAAAGTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: AQPRGAIASLSGGGGVGQCNSTG*LLKLES
Trigger: AGATTCCAACTTTAATAGCAAGCCTGTGGAGTTACA...CTGGCCCACGCCGCCGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS TCA 90 bp CCCGCTGCAGCAGCAGCAGGCTGCCGGTCATCAGGTAGGCAGCCGTaGGGAAGAACAGCAGGAACTGTGTTCGGCGGAGAAACTTCTGGA +
Preference number: 5 (lower is better)
Translates to: PAAAAAGCRSSGRQP*GRTAGTVFGGETSG
Trigger: TCCAGAAGTTTCTCCGCCGAACACAGTTCCTGCTGTTCTTCCTCACGGCTGCCTACCTGATGACCGGCAGCCTGCTGCTGCTGCAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS CCA 90 bp AGGGAGCTGACAGTCCCAGTGCCTAGTGAGGGATCATTTAGCACCTaGGTCAGCCAGGAGGCGAGGCCCCAAGACTGGTTCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: RELTVPVPSEGSFST*VSQEARPQDWFCHC
Trigger: GCAGTGGCAGAACCAGTCTTGGGGCCTCGCCTCCTGGCTGACCCAGGTGCTAAATGATCCCTCACTAGGCACTGGGACTGTCAGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572764.1
CDS-3UTR CAA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCAGCCGCTTCCCGTACTaGAGCCAGTCCAGGACGTGC +
Preference number: 5 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGASRFPY*SQSRTC
Trigger: GCACGTCCTGGACTGGCTCAAGTACGGGAAGCGGCT...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGGTGGTCACGCAGGGCTaGGTCCACCGTCCGGATGTA +
Preference number: 5 (lower is better)
Translates to: GLAPVCYVCAWLHLYLGVVVTQG*VHRPDV
Trigger: TACATCCGGACGGTGGACCAAGCCCTGCGTGACCAC...CACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCGTGGTCACGCAGGGCTaGGTCCACCGTCCGGATGTA +
Preference number: 5 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGAVVTQG*VHRPDV
Trigger: TACATCCGGACGGTGGACCAAGCCCTGCGTGACCAC...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TCAGCGGGGGCGGCGGCGTGGGCCAGGCCTATCATCTGGGCACATACTCCCTGGGGTATGTGTGTCCATTaGTGTTCGCCTTGTGATGTG +
Preference number: 5 (lower is better)
Translates to: SAGAAAWARPIIWAHTPWGMCVH*CSPCDV
Trigger: CACATCACAAGGCGAACACAAATGGACACACATACC...CCAGGGAGTATGTGCCCAGATGATAGGCCTGGCCCACGCCGCCGCCCCCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CAA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACCGGAGGCGTCATCCTaGCATCCTGGCTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: VVTPHTHLWDVRHTARAAPEASS*HPGSWH
Trigger: GTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCGG...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TGTGTTCGCCTTGTGATGTGTGTCTGTTGTGTCCAGGTCTCCTTGTGCGGGAGGCCGGAGGCGTCATCCTaGCATCCTGGCTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: CVRLVMCVCCVQVSLCGRPEASS*HPGSWH
Trigger: GTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCGG...CCTCCCGCACAAGGAGACCTGGACACAACAGACACACATCACAAGGCGAACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp TTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTGTCCCCACGGTCACATaGGCCTGTATCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LWDVRHTARAAHPGSSSLVPTVT*ACIREL
Trigger: CAGCTCCCTGATACAGGCCAATGTGACCGTGGGGAC...AAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp CCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAGTCCCCACGGTCACATaGGCCTGTATCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PHTHLWDVRHTARAAHPGVPTVT*ACIREL
Trigger: CAGCTCCCTGATACAGGCCAATGTGACCGTGGGGAC...TCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TTGTGCGGGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTTGTACAACGAGTGTCTaGCACAGGTGTCTGGTAGAC +
Preference number: 5 (lower is better)
Translates to: LCGPEHQSGERSPVVRLRCTTSV*HRCLVD
Trigger: GTCTACCAGACACCTGTGCAAGACACTCGTTGTACA...ACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCCCGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CAA 90 bp TGGGCAGCCCCGTCCAGTTGTGGTCACGCAGGGCTTGGTCCACCGTCCGGATGTTGTACAACGAGTGTCTaGCACAGGTGTCTGGTAGAC +
Preference number: 5 (lower is better)
Translates to: WAAPSSCGHAGLGPPSGCCTTSV*HRCLVD
Trigger: GTCTACCAGACACCTGTGCAAGACACTCGTTGTACA...ACATCCGGACGGTGGACCAAGCCCTGCGTGACCACAACTGGACGGGGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571494.1
CDS-3UTR CAA 90 bp GGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCGGAAGCTGCCCTCCTaGTTGTTCTCCACGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GLAPVCYVCAWLHLYLGVRKLPS*LFSTQS
Trigger: GCTCTGCGTGGAGAACAACAAGGAGGGCAGCTTCCG...CACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGCCCCATGCTTACACCTaGCTTCTGGGGCATGACTTG +
Preference number: 5 (lower is better)
Translates to: CPAQHPRVEHPDEQVYARPHAYT*LLGHDL
Trigger: CAAGTCATGCCCCAGAAGCAAGGTGTAAGCATGGGG...CCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTCCTCCCAATGCAGCTaGGCTCAGGCTGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPSSQCS*AQAEGR
Trigger: CCTCCCTTCAGCCTGAGCCAAGCTGCATTGGGAGGA...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS TCA 90 bp GCCACTGCCTTTTGCTGCAGGACTGTGGGAAGTCCTGCCCCACTCTaGGGTCCAGTCTCCTACGAGGACAATGGATATGGACTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ATAFCCRTVGSPAPL*GPVSYEDNGYGLAS
Trigger: GCTGGCCAGTCCATATCCATTGTCCTCGTAGGAGACTGGACCTCAGAGTGGGGCAGGACTTCCCACAGTCCTGCAGCAAAAGGCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572764.1
CDS CCA 90 bp GCCGTGAGGAAGAACAGCAGGAACTGTGTTCGGCGGAGAAACTTCTaGAGTCGGAAGAAAGGTTTGGCCATGCCCCTGGGCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: AVRKNSRNCVRRRNF*SRKKGLAMPLGSRA
Trigger: AGCCCTGCTGCCCAGGGGCATGGCCAAACCTTTCTTCCGACTCCAGAAGTTTCTCCGCCGAACACAGTTCCTGCTGTTCTTCCTCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS-3UTR CAA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTGAGCCCTTCTCGCCTTaGCACTCATGGTTACACTCT +
Preference number: 5 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPEPFSP*HSWLHS
Trigger: AGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCTC...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp AGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCCCCACGGTCACATaGGCCTGTATCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SINVCPAQHPRVEHPDEQVPTVT*ACIREL
Trigger: CAGCTCCCTGATACAGGCCAATGTGACCGTGGGGAC...TTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGCGGGGACAAACACTTTGGATTaGTTAGGCAGGAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: EHQSGERSPVVRLRHSAGTNTLD*LGRNLL
Trigger: CAGGAGGTTCCTGCCTAACAAATCCAAAGTGTTTGT...CCCCGCTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574946.5
CDS-3UTR CAA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCAAGCTGCCCTCCTTGTaGTTCTCCACGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPKLPSL*FSTQSS
Trigger: GCTGCTCTGCGTGGAGAACAACAAGGAGGGCAGCTT...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCGGAAGCTGCCCTCCTaGTTGTTCTCCACGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYRKLPS*LFSTQS
Trigger: GCTCTGCGTGGAGAACAACAAGGAGGGCAGCTTCCG...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACCGCATCAGTGTGGGTTaGGGGGAATCCCAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AQSINVCPAQHPRVEHPDRISVG*GESQEG
Trigger: TCCTTCCTGGGATTCCCCCAAACCCACACTGATGCG...GTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTAGGGGCCTTCGCAGATaGGATGCCGAAGCTATCCTG +
Preference number: 5 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFRGLRR*DAEAIL
Trigger: CAGGATAGCTTCGGCATCCAATCTGCGAAGGCCCCT...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp ACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCTGGCGCAGAAATGTTTaGCTTTTGCCTCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: TRPGPHTLEAAVFVPTSIWRRNV*LLPLPL
Trigger: CAGAGGCAGAGGCAAAAGCAAAACATTTCTGCGCCA...GATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CAA 90 bp AGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACCCTGACGAGCAATGTGTCCAGGTCTCCTaGTGCGGGCCTGAGCATCAG +
Preference number: 5 (lower is better)
Translates to: SINVCPAQHPRVEHPDEQCVQVS*CGPEHQ
Trigger: CTGATGCTCAGGCCCGCACAAGGAGACCTGGACACA...TTGCTCGTCAGGGTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS GCA 90 bp AAATGGCACCATTACTTATCTCCAGTGGCCACAGGGTCCTGCAGCTaGAGCCTCTGCCCAGGCGTCAAGGACATCTCCATTCCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: KWHHYLSPVATGSCS*SLCPGVKDISIPGL
Trigger: GAGCCCTGGAATGGAGATGTCCTTGACGCCTGGGCAGAGGCTGCAGCTGCAGGACCCTGTGGCCACTGGAGATAAGTAATGGTGCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS-3UTR CAA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACTCGCTCACAGACACGTaGAGGAAGGCCACCATCTCC +
Preference number: 5 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHSLTDT*RKATIS
Trigger: GGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCGA...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp CCTGGCACACCCCACGTGGGTGGCTTCTCTGCATCAAGACGGGGCTATGAGCCTTGTGATGTGTGTCTGTaGTGTCCAGGTCTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: PGTPHVGGFSASRRGYEPCDVCL*CPGLLV
Trigger: CACAAGGAGACCTGGACACAACAGACACACATCACA...AGGCTCATAGCCCCGTCTTGATGCAGAGAAGCCACCCACGTGGGGTGTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS GCA 90 bp GCTCCTGGCACCTGCCTGTGCTCGCCTGGGGTCACTCACTGTTCCTaGCCCGTTTCCAGTAGGTGTTCAAATGGCACCATTACTTATCTC +
Preference number: 5 (lower is better)
Translates to: APGTCLCSPGVTHCS*PVSSRCSNGTITYL
Trigger: GAGATAAGTAATGGTGCCATTTGAACACCTACTGGAAACGGGGCAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAGGTGCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 90 bp GACTGGTTCTGCCACTGCCTTTTGCTGCAGGACTGTGGGAAGTCCTaGCCCACTCTGAGGTCCAGTCTCCTACGAGGACAATGGATATGG +
Preference number: 5 (lower is better)
Translates to: DWFCHCLLLQDCGKS*PTLRSSLLRGQWIW
Trigger: CCATATCCATTGTCCTCGTAGGAGACTGGACCTCAGAGTGGGGCAGGACTTCCCACAGTCCTGCAGCAAAAGGCAGTGGCAGAACCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572764.1
CDS-3UTR CAA 90 bp ACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCTCTTTGCTCTTCCAGTaGCGGTCAGCTGCATATCCC +
Preference number: 5 (lower is better)
Translates to: THLWDVRHTARAAHPGSSSLLFQ*RSAAYP
Trigger: GGGATATGCAGCTGACCGCAACTGGAAGAGCAAAGA...GCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp CACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTCTTTGCTCTTCCAGTaGCGGTCAGCTGCATATCCC +
Preference number: 5 (lower is better)
Translates to: HTTHTFMGCQTHGQGRTPSLLFQ*RSAAYP
Trigger: GGGATATGCAGCTGACCGCAACTGGAAGAGCAAAGA...GGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGTCGCTCACAGACACGTaGAGGAAGGCCACCATCTCC +
Preference number: 5 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQSLTDT*RKATIS
Trigger: GGAGATGGTGGCCTTCCTCAACGTGTCTGTGAGCGA...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp TTGGCTGGTTGGGAGAGTATCCTCTTTACTGAGAAGCTAAGAGCTGTAGATGAGAGCCCCGTGGTGCGATaGCGTCACTCAGCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: LAGWESILFTEKLRAVDESPVVR*RHSAGA
Trigger: CGCCCCCGCTGAGTGACGCAATCGCACCACGGGGCT...CTCATCTACAGCTCTTAGCTTCTCAGTAAAGAGGATACTCTCCCAACCAGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTTTGGTGTGGCTGGTCTaGAGGTCAGTGTCTGCATTG +
Preference number: 5 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFLVWLV*RSVSAL
Trigger: CAATGCAGACACTGACCTCAAGACCAGCCACACCAA...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp CTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTCGAACACTCCTACCCTCCATACTaGAACCTCCTGGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: LAAQSINVCPAQHPRVEHSYPPY*NLLAST
Trigger: TGTGGAGGCCAGGAGGTTCAAGTATGGAGGGTAGGA...GTGTTCGACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp AAGAGAGGCAAGGCTGCGGAGTTTGTGGTGCCCGTAGTCACACCACACACACATAGCGTTGCTCCTGGGTaGCACTCCTACCCTCCATAC +
Preference number: 5 (lower is better)
Translates to: KRGKAAEFVVPVVTPHTHSVAPG*HSYPPY
Trigger: GTATGGAGGGTAGGAGTGCAACCCAGGAGCAACGCT...ATGTGTGTGTGGTGTGACTACGGGCACCACAAACTCCGCAGCCTTGCCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp CCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCACCCCATCACTCTACTaGCCTGCACTCTTCACTGAG +
Preference number: 5 (lower is better)
Translates to: PGTCVLRLCVAAFVSGGATPSLY*PALFTE
Trigger: CTCAGTGAAGAGTGCAGGCAAGTAGAGTGATGGGGT...GGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp TGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGGGGGTGCCTGGCACACCCCCGGTTCCTGATGCATTaGCCACACTTCTGCCCTACA +
Preference number: 5 (lower is better)
Translates to: CVTSVRGCICIWGCLAHPRFLMH*PHFCPT
Trigger: TGTAGGGCAGAAGTGTGGCAAATGCATCAGGAACCG...GGGGTGTGCCAGGCACCCCCAGATACAAATGCAGCCACGCACAGACGTAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp GGCCTGAGCATCAGAGTGGGGAGCGCAGCCCCGTGGTGCGATTGCGTCACTCAGGGCTTGCTATTAAAGTaGGAATCTGTAGACAGTCAG +
Preference number: 5 (lower is better)
Translates to: GLSIRVGSAAPWCDCVTQGLLLK*ESVDSQ
Trigger: CTGACTGTCTACAGATTCCAACTTTAATAGCAAGCC...CTGAGTGACGCAATCGCACCACGGGGCTGCGCTCCCCACTCTGATGCTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp GGAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATACTTCTCCTCTCCTCTaGGGGCCCCCTAAGAACCAA +
Preference number: 5 (lower is better)
Translates to: GAHGLAPVCYVCAWLHLYTSPLL*GPPKNQ
Trigger: TTGGTTCTTAGGGGGCCCCAAGAGGAGAGGAGAAGT...ATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp CCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAGGTATGTGTGTCCATTaGTGTTCGCCTTGTGATGTG +
Preference number: 5 (lower is better)
Translates to: PHTHLWDVRHTARAAHPGGMCVH*CSPCDV
Trigger: CACATCACAAGGCGAACACAAATGGACACACATACC...TCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCCCTGAGGGGTCTCAATaGCTCCTGATACTAGGAAGA +
Preference number: 5 (lower is better)
Translates to: EHTAWHLCVTSVRGCICIPEGSQ*LLILGR
Trigger: TCTTCCTAGTATCAGGAGCAATTGAGACCCCTCAGG...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp TATGGGATGTCAGACACACGGCCAGGGCCGCACACCCTGGAAGCAGCAGTCTTTTTATTCCTTGGCTGGTaGGGAGAGTATCCTCTTTAC +
Preference number: 5 (lower is better)
Translates to: YGMSDTRPGPHTLEAAVFLFLGW*GEYPLY
Trigger: GTAAAGAGGATACTCTCCCAACCAGCCAAGGAATAA...AAAGACTGCTGCTTCCAGGGTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp GTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCACACTACTTTATCCCCACCTaGTTCAGACCAACTCACCCA +
Preference number: 5 (lower is better)
Translates to: VTPHTHLWDVRHTARAAHYFIPT*FRPTHP
Trigger: TGGGTGAGTTGGTCTGAACAAGGTGGGGATAAAGTA...GTGTGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp AATGGTCCTTGCTGCTCAGAGCATAAATGTCTGCCCGGCCCAGCATCCCAGAGTGGTATGTGTGTCCATTaGTGTTCGCCTTGTGATGTG +
Preference number: 5 (lower is better)
Translates to: NGPCCSEHKCLPGPASQSGMCVH*CSPCDV
Trigger: CACATCACAAGGCGAACACAAATGGACACACATACC...ACTCTGGGATGCTGGGCCGGGCAGACATTTATGCTCTGAGCAGCAAGGACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp CACACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGAGATGGGAAAAGCTTaGTCCAAGATGGCAGATAAG +
Preference number: 5 (lower is better)
Translates to: HTLEAAVFVPTSIPMVLAEMGKA*SKMADK
Trigger: CTTATCTGCCATCTTGGACAAAGCTTTTCCCATCTC...AGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS TCA 90 bp CATAAAACACAGCTCCTTTCAGAGTCCTCTCGTGGCCATCGTCACTaGAGCATCCAATGTAGGTGCCTGCAGAAAGGGAAGCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: HKTQLLSESSRGHRH*SIQCRCLQKGKHGC
Trigger: ACAGCCATGCTTCCCTTTCTGCAGGCACCTACATTGGATGCTTCAGTGACGATGGCCACGAGAGGACTCTGAAAGGAGCTGTGTTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576947.1
CDS-3UTR CAA 90 bp AGCATCCCAGAGTCGAACACCCTGACGAGCAAGTCTATGCCAGGGCTACACACAACAAACACTTTGGATTaGTTAGGCAGGAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: SIPESNTLTSKSMPGLHTTNTLD*LGRNLL
Trigger: CAGGAGGTTCCTGCCTAACAAATCCAAAGTGTTTGT...TGTGTGTAGCCCTGGCATAGACTTGCTCGTCAGGGTGTTCGACTCTGGGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp GGTGCCCGTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGACAAACACTTTGGATTaGTTAGGCAGGAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: GARSHTTHTFMGCQTHGQTNTLD*LGRNLL
Trigger: CAGGAGGTTCCTGCCTAACAAATCCAAAGTGTTTGT...CTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTACGGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539421.1
ENST00000571494.1
ENST00000574946.5
CDS-3UTR CAA 90 bp ATGAACCCCTTTGGAGTCATCACATTTCAGATACCTCCAATGGGTTTCCGAGCAAAGCTGCCCTCCTTGTaGTTCTCCACGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: MNPFGVITFQIPPMGFRAKLPSL*FSTQSS
Trigger: GCTGCTCTGCGTGGAGAACAACAAGGAGGGCAGCTT...TGCTCGGAAACCCATTGGAGGTATCTGAAATGTGATGACTCCAAAGGGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp GAGCACACGGCCTGGCACCTGTGTGTTACGTCTGTGCGTGGCTGCATTTGTATCTGTTTTAACACAGGTTaGTGTAACTCCACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: EHTAWHLCVTSVRGCICICFNTG*CNSTGL
Trigger: CAAGCCTGTGGAGTTACACAAACCTGTGTTAAAACA...GATACAAATGCAGCCACGCACAGACGTAACACACAGGTGCCAGGCCGTGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp CACCCTGGAAGCAGCAGTCTTTGTGCCCACCTCCATCCCAATGGTCCTTGCTGCAATCTCAAGCAAGGCTaGATCCTGTACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: HPGSSSLCAHLHPNGPCCNLKQG*ILYLNN
Trigger: ATTGTTTAAGTACAGGATCAAGCCTTGCTTGAGATT...GCAGCAAGGACCATTGGGATGGAGGTGGGCACAAAGACTGCTGCTTCCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp GTAGTCACACCACACACACATTTATGGGATGTCAGACACACGGCCAGGGCCGCAAGAAATGTTTTGCTTTaGCCTCTGCCTCTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: VVTPHTHLWDVRHTARAARNVLL*PLPLFK
Trigger: CTTGAACAGAGGCAGAGGCAAAAGCAAAACATTTCT...TGCGGCCCTGGCCGTGTGTCTGACATCCCATAAATGTGTGTGTGGTGTGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539421.1
CDS-3UTR CAA 90 bp CTTCTACCCAGCATTCCCATAAGTCTTGAAATTCCCTCTGGCTTCATTGTCTTAAAGTCCGGCCACTCTTaGCTCTTCCAGTTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: LLPSIPISLEIPSGFIVLKSGHS*LFQLRS
Trigger: TGACCGCAACTGGAAGAGCAAAGAGTGGCCGGACTT...TAAGACAATGAAGCCAGAGGGAATTTCAAGACTTATGGGAATGCTGGGTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp AGCAGAAAACAAACCTGTGTCCCAAGAATTCTTGCAGTCGTAACATCAACCTCATCTTTGCTCTTCCAGTaGCGGTCAGCTGCATATCCC +
Preference number: 5 (lower is better)
Translates to: SRKQTCVPRILAVVTSTSSLLFQ*RSAAYP
Trigger: GGGATATGCAGCTGACCGCAACTGGAAGAGCAAAGA...TGAGGTTGATGTTACGACTGCAAGAATTCTTGGGACACAGGTTTGTTTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS-3UTR CAA 90 bp ACCATAGCTGGAAAGATGGAAGGTGTCATTGGCTTAGTCCAGGACATGTATTCCCTTTCTTCCCAGGGTTaGGAAGCCTGTCTATTCTTC +
Preference number: 5 (lower is better)
Translates to: TIAGKMEGVIGLVQDMYSLSSQG*EACLFF
Trigger: GAAGAATAGACAGGCTTCCAAACCCTGGGAAGAAAG...GGAATACATGTCCTGGACTAAGCCAATGACACCTTCCATCTTTCCAGCTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574946.5
CDS GCA 72 bp CACGGCGGCCACTGGCAAGGTCTGCAGGGGGCCGGGTaGCCGGGGGCCCTGTGGGAGAGCCACGCGGACCCG +
Preference number: 6 (lower is better)
Translates to: HGGHWQGLQGAG*PGALWESHADP
Trigger: CGGGTCCGCGTGGCTCTCCCACAGGGCCCCCGGGCACCCGGCCCCCTGCAGACCTTGCCAGTGGCCGCCGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS CCA 72 bp ATCTCCTGGCGCAGAAATCCCGCGATCGCGGCCGGCTaGGGCGCCCGCACCCGCGCCCATGGCCCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ISWRRNPAIAAG*GARTRAHGPPS
Trigger: GGAAGGCGGGCCATGGGCGCGGGTGCGGGCGCCCCAGCCGGCCGCGATCGCGGGATTTCTGCGCCAGGAGAT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317744.10
ENST00000576083.5
CDS CAA 90 bp AGCGCCCAGGTGGGAGTGAGGCCAGGGCCTCCGGAGGCGTCATCCTaGCATCCTGGCTCCTGGCACCTGCCTGTGCTCGCCTGGGGTCAC +
Preference number: 6 (lower is better)
Translates to: SAQVGVRPGPPEASS*HPGSWHLPVLAWGH
Trigger: GTGACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCGGAGGCCCTGGCCTCACTCCCACCTGGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS TCA 72 bp CGGGGCCCAGGGCGGGCGGTCCCTGGGAGTCACTCATaGAGTGGTGGAACCAGCGGCGACGCAACTGACGCA +
Preference number: 6 (lower is better)
Translates to: RGPGRAVPGSHS*SGGTSGDATDA
Trigger: TGCGTCAGTTGCGTCGCCGCTGGTTCCACCACTTCATGAGTGACTCCCAGGGACCGCCCGCCCTGGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS GCA 72 bp ACACCCAGCAGCAGCTCTGGGCTGACTCGAGGGTCGTaGAGGGCTCTGCTGTCCAGCAAGCCCACGCCCAGC +
Preference number: 6 (lower is better)
Translates to: TPSSSSGLTRGS*RALLSSKPTPS
Trigger: GCTGGGCGTGGGCTTGCTGGACAGCAGAGCCCTGCACGACCCTCGAGTCAGCCCAGAGCTGCTGCTGGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS GCA 72 bp GCCGCCAAGTCACAGCATCTGCCCTGCTCTGCCATGTaGACCGGTGGACCCTGTCCTCACCCGGAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: AAKSQHLPCSAM*TGGPCPHPELA
Trigger: AGCCAGCTCCGGGTGAGGACAGGGTCCACCGGTGCACATGGCAGAGCAGGGCAGATGCTGTGACTTGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS CCA 72 bp CTCATGGTTACACTCTTCCAGCCCCACGCTCACCGCTaGCAGCCGGTTCCCGCAGTAACACTCCGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: LMVTLFQPHAHR*QPVPAVTLRPG
Trigger: GCCGGGGCGGAGTGTTACTGCGGGAACCGGCTGCCAGCGGTGAGCGTGGGGCTGGAAGAGTGTAACCATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574232.5
ENST00000574946.5
CDS TCA 72 bp TCACTCATGAAGTGGTGGAACCAGCGGCGACGCAACTaGCGCAGCTCCGAGTTGCGGCTCCGGAGCCAGCGG +
Preference number: 6 (lower is better)
Translates to: SLMKWWNQRRRN*RSSELRLRSQR
Trigger: CCGCTGGCTCCGGAGCCGCAACTCGGAGCTGCGTCAGTTGCGTCGCCGCTGGTTCCACCACTTCATGAGTGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS GCA 72 bp CGGAGGCGTCATCCTTGCATCCTGGCTCCTGGCACCTaGCTGTGCTCGCCTGGGGTCACTCACTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RRRHPCILAPGT*LCSPGVTHCSC
Trigger: GCAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGACGCCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 72 bp CCCCAAAGCCGCCAAGTCACAGCATCTGCCCTGCTCTaGCATGTGCACCGGTGGACCCTGTCCTCACCCGGA +
Preference number: 6 (lower is better)
Translates to: PQSRQVTASALL*HVHRWTLSSPG
Trigger: TCCGGGTGAGGACAGGGTCCACCGGTGCACATGGCAGAGCAGGGCAGATGCTGTGACTTGGCGGCTTTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS GCA 72 bp CGTCATCCTTGCATCCTGGCTCCTGGCACCTGCCTGTaGTCGCCTGGGGTCACTCACTGTTCCTGCCCCGTT +
Preference number: 6 (lower is better)
Translates to: RHPCILAPGTCL*SPGVTHCSCPV
Trigger: AACGGGGCAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAGGTGCCAGGAGCCAGGATGCAAGGATGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 72 bp AGCCAGGAGGCGAGGCCCCAAGACTGGTTCTGCCACTaGCTTTTGCTGCAGGACTGTGGGAAGTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SQEARPQDWFCH*LLLQDCGKSCP
Trigger: GGGGCAGGACTTCCCACAGTCCTGCAGCAAAAGGCAGTGGCAGAACCAGTCTTGGGGCCTCGCCTCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572764.1
CDS CCA 72 bp GCCCCGCACACAGAGCCCTTCTCGCCTTTGCACTCATaGTTACACTCTTCCAGCCCCACGCTCACCGCTGGC +
Preference number: 6 (lower is better)
Translates to: APHTEPFSPLHS*LHSSSPTLTAG
Trigger: GCCAGCGGTGAGCGTGGGGCTGGAAGAGTGTAACCATGAGTGCAAAGGCGAGAAGGGCTCTGTGTGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571494.1
ENST00000573634.5
ENST00000574232.5
ENST00000574946.5
CDS GCA 72 bp TGGGTCAGCCAGGAGGCGAGGCCCCAAGACTGGTTCTaGCACTGCCTTTTGCTGCAGGACTGTGGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: WVSQEARPQDWF*HCLLLQDCGKS
Trigger: GGACTTCCCACAGTCCTGCAGCAAAAGGCAGTGGCAGAACCAGTCTTGGGGCCTCGCCTCCTGGCTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572764.1
CDS CCA 72 bp CCATGTGCACCGGTGGACCCTGTCCTCACCCGGAGCTaGCTGCTAAGATGCTCCCAGAAGCTGAGGACAGCA +
Preference number: 6 (lower is better)
Translates to: PCAPVDPVLTRS*LLRCSQKLRTA
Trigger: TGCTGTCCTCAGCTTCTGGGAGCATCTTAGCAGCCAGCTCCGGGTGAGGACAGGGTCCACCGGTGCACATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS TCA 72 bp GCAGCAGCAGGCTGCCGGTCATCAGGTAGGCAGCCGTaGGGAAGAACAGCAGGAACTGTGTTCGGCGGAGAA +
Preference number: 6 (lower is better)
Translates to: AAAGCRSSGRQP*GRTAGTVFGGE
Trigger: TTCTCCGCCGAACACAGTTCCTGCTGTTCTTCCTCACGGCTGCCTACCTGATGACCGGCAGCCTGCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 72 bp TGCCACTGCCTTTTGCTGCAGGACTGTGGGAAGTCCTaGCCCACTCTGAGGTCCAGTCTCCTACGAGGACAA +
Preference number: 6 (lower is better)
Translates to: CHCLLLQDCGKS*PTLRSSLLRGQ
Trigger: TTGTCCTCGTAGGAGACTGGACCTCAGAGTGGGGCAGGACTTCCCACAGTCCTGCAGCAAAAGGCAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572764.1
CDS TCA 72 bp CAGCTCCTTTCAGAGTCCTCTCGTGGCCATCGTCACTaGAGCATCCAATGTAGGTGCCTCGGCTGTGGATGG +
Preference number: 6 (lower is better)
Translates to: QLLSESSRGHRH*SIQCRCLGCGW
Trigger: CCATCCACAGCCGAGGCACCTACATTGGATGCTTCAGTGACGATGGCCACGAGAGGACTCTGAAAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
CDS GCA 72 bp CATTACTTATCTCCAGTGGCCACAGGGTCCTGCAGCTaGAGCCTCTGCCCAGGCGTCAAGGACATCTCCATT +
Preference number: 6 (lower is better)
Translates to: HYLSPVATGSCS*SLCPGVKDISI
Trigger: AATGGAGATGTCCTTGACGCCTGGGCAGAGGCTGCAGCTGCAGGACCCTGTGGCCACTGGAGATAAGTAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 72 bp ACCTGCCTGTGCTCGCCTGGGGTCACTCACTGTTCCTaGCCCGTTTCCAGTAGGTGTTCAAATGGCACCATT +
Preference number: 6 (lower is better)
Translates to: TCLCSPGVTHCS*PVSSRCSNGTI
Trigger: AATGGTGCCATTTGAACACCTACTGGAAACGGGGCAGGAACAGTGAGTGACCCCAGGCGAGCACAGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000572764.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS GCA 72 bp GTGGCCATCGTCACTGAAGCATCCAATGTAGGTGCCTaGAGAAAGGGAAGCATGGCTGTGACCAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VAIVTEASNVGA*RKGSMAVTSWP
Trigger: TGGCCAGCTGGTCACAGCCATGCTTCCCTTTCTGCAGGCACCTACATTGGATGCTTCAGTGACGATGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576947.1
CDS CCA 72 bp AAGAACAGCAGGAACTGTGTTCGGCGGAGAAACTTCTaGAGTCGGAAGAAAGGTTTGGCCATGCCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: KNSRNCVRRRNF*SRKKGLAMPLG
Trigger: GCCCAGGGGCATGGCCAAACCTTTCTTCCGACTCCAGAAGTTTCTCCGCCGAACACAGTTCCTGCTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317744.10
ENST00000539421.1
ENST00000571973.1
ENST00000574232.5
ENST00000574946.5
ENST00000576083.5
ENST00000576233.1
CDS TCA 72 bp TTTTGCTGCAGGACTGTGGGAAGTCCTGCCCCACTCTaGGGTCCAGTCTCCTACGAGGACAATGGATATGGA +
Preference number: 6 (lower is better)
Translates to: FCCRTVGSPAPL*GPVSYEDNGYG
Trigger: TCCATATCCATTGTCCTCGTAGGAGACTGGACCTCAGAGTGGGGCAGGACTTCCCACAGTCCTGCAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572764.1
CDS TCA 72 bp CAGCTCCTTTCAGAGTCCTCTCGTGGCCATCGTCACTaGAGCATCCAATGTAGGTGCCTGCAGAAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: QLLSESSRGHRH*SIQCRCLQKGK
Trigger: CTTCCCTTTCTGCAGGCACCTACATTGGATGCTTCAGTGACGATGGCCACGAGAGGACTCTGAAAGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576947.1
CDS TCA 72 bp CCCTCATCTCCTGGCGCAGAAATCCAGAGCCATGGATaGAGCCTGAAACATGGGAGAGATGGAGCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: PSSPGAEIQSHG*SLKHGRDGAVH
Trigger: ATGCACTGCTCCATCTCTCCCATGTTTCAGGCTTCATCCATGGCTCTGGATTTCTGCGCCAGGAGATGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571973.1
CDS TCA 72 bp AGGTTTAAATCCCAGCTTTGTTACTGGCCAGCTGTGTaGCACTGGGTAGGTTGCTTAACCTTGCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: RFKSQLCYWPAV*HWVGCLTLLGL
Trigger: GAGGCCCAGCAAGGTTAAGCAACCTACCCAGTGTCACACAGCTGGCCAGTAACAAAGCTGGGATTTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576233.1
CDS CAA 90 bp CTGGCGCAGAAATCCTGTGCTTGCTTTATCCAAGGACCAGCTGTGTaGCAGGAGCACTGGACAAAGCCAGGTTTAAATCCCAGCTTTGTT +
Preference number: 6 (lower is better)
Translates to: LAQKSCACFIQGPAV*QEHWTKPGLNPSFV
Trigger: AACAAAGCTGGGATTTAAACCTGGCTTTGTCCAGTGCTCCTGCAACACAGCTGGTCCTTGGATAAAGCAAGCACAGGATTTCTGCGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576233.1
CDS TCA 72 bp CAGCTCCTTTCAGAGTCCTCTCGTGGCCATCGTCACTaGAGCATCCAATGTAGGTGCCTAAAGATTTTTCCC +
Preference number: 6 (lower is better)
Translates to: QLLSESSRGHRH*SIQCRCLKIFP
Trigger: GGGAAAAATCTTTAGGCACCTACATTGGATGCTTCAGTGACGATGGCCACGAGAGGACTCTGAAAGGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573634.5
CDS GCA 72 bp TCATCTCCTGGCGCAGAAATGTTTTGCTTTTGCCTCTaGCTCTGTTCAAGTTCACCAAGAGACGGAGCAAAC +
Preference number: 6 (lower is better)
Translates to: SSPGAEMFCFCL*LCSSSPRDGAN
Trigger: GTTTGCTCCGTCTCTTGGTGAACTTGAACAGAGGCAGAGGCAAAAGCAAAACATTTCTGCGCCAGGAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539421.1
ENST00000574232.5