RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WSB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109046

Ensembl transcript IDs: ENST00000262394.7, ENST00000348811.6, ENST00000427287.6, ENST00000467843.6, ENST00000487603.5, ENST00000578312.5, ENST00000579733.5, ENST00000581089.1, ENST00000581185.5, ENST00000581440.5, ENST00000582208.1, ENST00000583096.1, ENST00000583193.5, ENST00000583742.1, ENST00000583786.5, ENST00000584114.1, ENST00000584354.1

Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGC +
Preference number: 1 (lower is better)
Translates to: GKGRPQPGSQRCHSF*PANTIVRLCASGAS
Trigger: GCTGGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
3UTR GCA 90 bp TGGTTTCAGGCTCGTGAAACTTCTCATGCTATTTTCTTACGCCTGTaGTGGCTGGCTGACGGCCAAGTCCTCTGCCTCTGCCACTGCCTC +
Preference number: 1 (lower is better)
Translates to: WFQARETSHAIFLRL*WLADGQVLCLCHCL
Trigger: GAGGCAGTGGCAGAGGCAGAGGACTTGGCCGTCAGCCAGCCAGCACAGGCGTAAGAAAATAGCATGAGAAGTTTCACGAGCCTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR GCA 90 bp ACATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGT +
Preference number: 1 (lower is better)
Translates to: TSTSTCVRTVHLAAE*KVTSSYGKGRPQPG
Trigger: ACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
3UTR CCA 90 bp TTTCAGGCTCGTGAAACTTCTCATGCTATTTTCTTACGCCTGTGCTaGCTGGCTGACGGCCAAGTCCTCTGCCTCTGCCACTGCCTCAAC +
Preference number: 1 (lower is better)
Translates to: FQARETSHAIFLRLC*LADGQVLCLCHCLN
Trigger: GTTGAGGCAGTGGCAGAGGCAGAGGACTTGGCCGTCAGCCAGCCAGCACAGGCGTAAGAAAATAGCATGAGAAGTTTCACGAGCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR GCA 90 bp TTGGTCTTGCCGACCCAAGAGCAGTGTAAACCAGTTGAATCCAACTaGATCACAGTCACAGCAGGCAGGAAATTTCAAGGATCGTTAAGT +
Preference number: 1 (lower is better)
Translates to: LVLPTQEQCKPVESN*ITVTAGRKFQGSLS
Trigger: ACTTAACGATCCTTGAAATTTCCTGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGGTCGGCAAGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR TCA 90 bp CCTTCTTCCCCACAGACAAATGGAAAATTCAAACATGTTTCTACTTaGCATATACGCTGCAATCTTCCTTTCACACTGGCACTCACTATG +
Preference number: 1 (lower is better)
Translates to: PSSPQTNGKFKHVST*HIRCNLPFTLALTM
Trigger: CATAGTGAGTGCCAGTGTGAAAGGAAGATTGCAGCGTATATGTCAAGTAGAAACATGTTTGAATTTTCCATTTGTCTGTGGGGAAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR GCA 90 bp AAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACCATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC +
Preference number: 2 (lower is better)
Translates to: KGRPQPGSQRCHSFCPANHCAPV*EWCQHN
Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...GTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
3UTR-3UTR GCA 90 bp TATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCACATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC +
Preference number: 2 (lower is better)
Translates to: YGKGRPQPGSQRCHSFCPHCAPV*EWCQHN
Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...TGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
3UTR-3UTR GCA 90 bp CCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCCATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC +
Preference number: 2 (lower is better)
Translates to: PNARLLHPMVKVAPSPVAHCAPV*EWCQHN
Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...GGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
3UTR-3UTR TCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCAGGCAGGAGAATTGCTTaGACCCAGGAGGTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAGRRIA*TQEVEA
Trigger: AGCCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCC...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 90 bp GCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCC +
Preference number: 2 (lower is better)
Translates to: AESGHRPAPVYVQYT*QPNARLLHPMVKVA
Trigger: GGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
3UTR-3UTR GCA 90 bp AAGAAAAGCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTCAGCTAACACCATTGTaGGCCTGTGTGCGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: KKSRKWTSTSTCVRTVHLQLTPL*ACVRVV
Trigger: CACCACTCGCACACAGGCGCACAATGGTGTTAGCTG...AAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
3UTR-3UTR CCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCACCAAAAATGCTGTTTTaGGCCAGGTTCGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAPKMLF*ARFGGS
Trigger: TGAGCCACCGAACCTGGCCCAAAACAGCATTTTTGG...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR TCA 90 bp TGTATTGCTTCTTTGGCAACTCACCAATATCATCCCCTGCAGAAACAGAGTTTTACTGCTGACCTCAGGTaGTTTGCCCGCCTCACCCAA +
Preference number: 2 (lower is better)
Translates to: CIASLATHQYHPLQKQSFTADLR*FARLTQ
Trigger: TTGGGTGAGGCGGGCAAATCACCTGAGGTCAGCAGT...AAAACTCTGTTTCTGCAGGGGATGATATTGGTGAGTTGCCAAAGAAGCAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 90 bp TCTAGAGCAGCGCCTGAGTCCTGCATTCTTTCTTCATTGTCCTTTTaGCTTAATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGAC +
Preference number: 2 (lower is better)
Translates to: SRAAPESCILSSLSF*LNLPVVYHQPYNGD
Trigger: GTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAATTAAGCAAAAAGGACAATGAAGAAAGAATGCAGGACTCAGGCGCTGCTCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 90 bp GCGCCTGAGTCCTGCATTCTTTCTTCATTGTCCTTTTTGCTTAATTaGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: APESCILSSLSFLLN*PVVYHQPYNGDREK
Trigger: TTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAATTAAGCAAAAAGGACAATGAAGAAAGAATGCAGGACTCAGGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR CCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCACTGGATATGTTGGTGTaGAAAGCAAAAATAATGCAA +
Preference number: 2 (lower is better)
Translates to: PKSSVNQLNPTASQSQQALDMLV*KAKIMQ
Trigger: TTGCATTATTTTTGCTTTCCACACCAACATATCCAG...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 90 bp ACCTTCTTCCCCACAGACAAATGGAAAATTCAAACATGTTTCTACTaGACATATACGCTGCAATCTTCCTTTCACACTGGCACTCACTAT +
Preference number: 2 (lower is better)
Translates to: TFFPTDKWKIQTCFY*TYTLQSSFHTGTHY
Trigger: ATAGTGAGTGCCAGTGTGAAAGGAAGATTGCAGCGTATATGTCAAGTAGAAACATGTTTGAATTTTCCATTTGTCTGTGGGGAAGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR GCA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCAGGAACCCACCACCATaGCCAGCTAATTTTTGTAAT +
Preference number: 2 (lower is better)
Translates to: LPYFPLVLQSVITVITFFRNPPP*PANFCN
Trigger: ATTACAAAAATTAGCTGGGCATGGTGGTGGGTTCCT...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR TCA 90 bp TCATCAATAAGCATAACCCTCTTAACAGTCACTTTACTTAAGCTGTCTATAGGTCATTTAAAATATTCATaGCACCGAGCACAGACTTCA +
Preference number: 2 (lower is better)
Translates to: SSISITLLTVTLLKLSIGHLKYS*HRAQTS
Trigger: TGAAGTCTGTGCTCGGTGTCATGAATATTTTAAATG...ACCTATAGACAGCTTAAGTAAAGTGACTGTTAAGAGGGTTATGCTTATTGATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581185.5
3UTR TCA 72 bp AAAACCACCATAAGAGCTGCTGCACTCGGGGAGCCCTaGATGAATTCTAGAGCAGCGCCTGAGTCCTGCATT +
Preference number: 3 (lower is better)
Translates to: KTTIRAAALGEP*MNSRAAPESCI
Trigger: AATGCAGGACTCAGGCGCTGCTCTAGAATTCATTCAGGGCTCCCCGAGTGCAGCAGCTCTTATGGTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR CAA 90 bp CGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTGCCCAGCTAACACCATaGTGCGCCTGTGTGCGAGTG +
Preference number: 3 (lower is better)
Translates to: RTVHLAAECKVTSSYGKGAQLTP*CACVRV
Trigger: CACTCGCACACAGGCGCACAATGGTGTTAGCTGGGC...ACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
3UTR GCA 72 bp AGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTATGGTAAAGGTCGCCCC +
Preference number: 3 (lower is better)
Translates to: STCVRTVHLAAE*KVTSSYGKGRP
Trigger: GGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
3UTR-3UTR CAA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCCTGACCTCAGGTGATTaGCCCGCCTCACCCAATTCA +
Preference number: 3 (lower is better)
Translates to: ICLWCTINLTMETERKYSLTSGD*PASPNS
Trigger: TGAATTGGGTGAGGCGGGCAAATCACCTGAGGTCAG...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR GCA 72 bp CCGACCCAAGAGCAGTGTAAACCAGTTGAATCCAACTaGATCACAGTCACAGCAGGCAGGAAATTTCAAGGA +
Preference number: 3 (lower is better)
Translates to: PTQEQCKPVESN*ITVTAGRKFQG
Trigger: TCCTTGAAATTTCCTGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR CAA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCATCCTTTTTGCTTAATTaGCCTGTGGTGTACCATCAA +
Preference number: 3 (lower is better)
Translates to: PKSSVNQLNPTASQSQQASFLLN*PVVYHQ
Trigger: TTGATGGTACACCACAGGCAAATTAAGCAAAAAGGA...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR TCA 72 bp TCATCATGTTTCCATCATCTTTCAGGTCCCATACTCTaGGAGTTTTGTCTCTTGAAGCTGACACCAGGATCA +
Preference number: 3 (lower is better)
Translates to: SSCFHHLSGPIL*EFCLLKLTPGS
Trigger: TGATCCTGGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGAAAGATGATGGAAACATGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582208.1
3UTR-3UTR CAA 90 bp ACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCCTTTTCTGCAGTGGTGTGATCTaGGCTTACTGCAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: TFKLYVLDDIPKDNKILFCSGVI*AYCNLH
Trigger: GTGGAGGTTGCAGTAAGCCAAGATCACACCACTGCA...GAAAAGGATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR-3UTR CAA 90 bp TGTACACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCTTCATACTCTGAGAGTTTaGTCTCTTGAAGCTGACACC +
Preference number: 3 (lower is better)
Translates to: CTPNSDAPSILSSCFHHLHTLRV*SLEADT
Trigger: GGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATG...AAGATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582208.1
3UTR GCA 72 bp GATAAACAACAGAAGGCAAAAGCAGATATGCTGTATTaGTTCTTTGGCAACTCACCAATATCATCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: DKQQKAKADMLY*FFGNSPISSPA
Trigger: TGCAGGGGATGATATTGGTGAGTTGCCAAAGAAGCAATACAGCATATCTGCTTTTGCCTTCTGTTGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CCA 72 bp TCCAAGTCCATAATCAACGTCTTCCCTATTTTCCTTTaGTCCTTCAGTCTGTTATTACTGTTATTACCTTCT +
Preference number: 3 (lower is better)
Translates to: SKSIINVFPIFL*SFSLLLLLLPS
Trigger: AGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAGACGTTGATTATGGACTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CCA 72 bp TGTATTATCATAAGCCACAGTCTGTTCAGAATTACTTaGGTAAAATGCTATGTCACCTACAAACCCTCATCT +
Preference number: 3 (lower is better)
Translates to: CIIISHSLFRIT*VKCYVTYKPSS
Trigger: AGATGAGGGTTTGTAGGTGACATAGCATTTTACCCAAGTAATTCTGAACAGACTGTGGCTTATGATAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR GCA 72 bp TATAATACTTTATACCACAAGGGTAAACTAGTAAGCTaGTTTCTAAAATTAAGGCAGCAGCAGTGTTTAGAG +
Preference number: 3 (lower is better)
Translates to: YNTLYHKGKLVS*FLKLRQQQCLE
Trigger: CTCTAAACACTGCTGCTGCCTTAATTTTAGAAAGCAGCTTACTAGTTTACCCTTGTGGTATAAAGTATTATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp AAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACCCCTCGGGGGAAAGCTaGCCATCTATGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: KGRPQPGSQRCHSFCPANPSGES*PSMGHR
Trigger: ACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGG...GTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CCA 90 bp CGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTCCCTCGGGGGAAAGCTaGCCATCTATGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: RPQPGSQRCHSFCPANTIPSGES*PSMGHR
Trigger: ACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGG...AATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp CATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTACCCAGCCTCGCGCCTaGGGAGGAAGACAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: HPMVKVAPSPVARDATLSTQPRA*GGRQFP
Trigger: GGGGAACTGTCTTCCTCCGCAGGCGCGAGGCTGGGT...AGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp GGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTCAGCTAACACCATTGTaGGCCTGTGTGCGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GKGRPQPGSQRCHSFCPAQLTPL*ACVRVV
Trigger: CACCACTCGCACACAGGCGCACAATGGTGTTAGCTG...AGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CCA 90 bp GCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGACCCTCGGGGGAAAGCTaGCCATCTATGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: ARDATLSAQLTPLCACVRPSGES*PSMGHR
Trigger: ACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGG...TCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CCA 90 bp GTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCAGCGCCTGTGTGCGAGTaGTGCCAGCATAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: VAPSPVARDATLSAQLTPAPVCE*CQHNLN
Trigger: ATTGAGGTTATGCTGGCACCACTCGCACACAGGCGC...TGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR TCA 90 bp TATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCACGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: YGKGRPQPGSQRCHSFCPRSLSR*PSGESW
Trigger: CCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCG...TGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp CGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTCATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC +
Preference number: 4 (lower is better)
Translates to: RPQPGSQRCHSFCPANTIHCAPV*EWCQHN
Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...AATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CCA 90 bp AGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCCAACAGAGAAGAGAGTaGCGACCGCTGAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RLLHPMVKVAPSPVARDAQQRRE*RPLRGV
Trigger: CACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTG...GGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp AGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCCTATGGGGCACCGTCTaGTTCCGGGAATACGATGCG +
Preference number: 4 (lower is better)
Translates to: RLLHPMVKVAPSPVARDALWGTV*FREYDA
Trigger: CGCATCGTATTCCCGGAATCAGACGGTGCCCCATAG...GGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp AGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLLHPMVKVAPSPVARDARSLSR*PSGESW
Trigger: CCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCG...GGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp GGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCTTTACTGGCTCCGACTaGACACAGCATAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRPQPGSQRCHSFCPANTFTGSD*TQHRRV
Trigger: GACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAA...GGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp GGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTCCGGGAATACGATaGGGACCCAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GRPQPGSQRCHSFCPANTIPGIR*GPNNRE
Trigger: TTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAAT...GGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp TGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCCAGCTAACACCATTGTaGGCCTGTGTGCGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CHSFCPANTIVRLCASGAQLTPL*ACVRVV
Trigger: CACCACTCGCACACAGGCGCACAATGGTGTTAGCTG...GGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CCA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCACCCTCGGGGGAAAGCTaGCCATCTATGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: HVCQASLKLLTSGDLPASPSGES*PSMGHR
Trigger: ACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGG...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp TCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCGCGCCTGTGTGCGAGTaGTGCCAGCATAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: SYGKGRPQPGSQRCHSFCAPVCE*CQHNLN
Trigger: ATTGAGGTTATGCTGGCACCACTCGCACACAGGCGC...GCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp GGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRPQPGSQRCHSFCPANTLTTSV*STKLRR
Trigger: CCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAG...GGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp CCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCCCTGTGTGCGAGTGGTaGCAGCATAACCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: PSPVARDATLSAQLTPLCPVCEW*QHNLNH
Trigger: GTGATTGAGGTTATGCTGGCACCACTCGCACACAGG...GCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CCA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCACAACAGAGAAGAGAGTaGCGACCGCTGAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: HVCQASLKLLTSGDLPASQQRRE*RPLRGV
Trigger: CACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTG...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp CATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCGCCTGTGTGCGAGTaGTGCCAGCATAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: HPMVKVAPSPVARDATLSAPVCE*CQHNLN
Trigger: ATTGAGGTTATGCTGGCACCACTCGCACACAGGCGC...AGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp AAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACCTGTACACCCAATTCTaGTGCCCCCTCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: KGRPQPGSQRCHSFCPANLYTQF*CPLNTF
Trigger: GAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAG...GTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR TCA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCAGGAATCGGCAGCTCCTaGACTTCTTGGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: HVCQASLKLLTSGDLPASGIGSS*TSWVGI
Trigger: GATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCC...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCACCCAGCCTCGCGCCTaGGGAGGAAGACAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTTQPRA*GGRQFP
Trigger: GGGGAACTGTCTTCCTCCGCAGGCGCGAGGCTGGGT...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCATGCAGGCTAGGGACCTaGCGTGGAGTGGCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HVCQASLKLLTSGDLPASCRLGT*RGVAQK
Trigger: TTTTTGGGCCACTCCACGGCAGGTCCCTAGCCTGCA...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCACCAAGATCGCACCACTaGACTCCAGCCCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: HVCQASLKLLTSGDLPASPRSHH*TPAQVT
Trigger: TGTCACCTGGGCTGGAGTGCAGTGGTGCGATCTTGG...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp AAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACTCACACCAATATTGCTaGCACCACTGCTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: KGRPQPGSQRCHSFCPANSHQYC*HHCFTG
Trigger: GCCAGTAAAGCAGTGGTGGCAGCAATATTGGTGTGA...GTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp GCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGACCTGTGTGCGAGTGGTaGCAGCATAACCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: ARDATLSAQLTPLCACVRPVCEW*QHNLNH
Trigger: GTGATTGAGGTTATGCTGGCACCACTCGCACACAGG...TCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp AAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCAGCTAACACCATTGTaGGCCTGTGTGCGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: KVTSSYGKGRPQPGSQRCQLTPL*ACVRVV
Trigger: CACCACTCGCACACAGGCGCACAATGGTGTTAGCTG...GCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp GTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTAT +
Preference number: 4 (lower is better)
Translates to: VAPSPVARDATLSAQLTPHLAAE*KVTSSY
Trigger: ATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTG...TGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp CCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCCCACCACTGCTTTACTaGCTCCGACTGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: PNARLLHPMVKVAPSPVAPPLLY*LRLNTA
Trigger: TGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTGGTGG...GGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp GCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGACCACCACTGCTTTACTaGCTCCGACTGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: ARDATLSAQLTPLCACVRPPLLY*LRLNTA
Trigger: TGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTGGTGG...TCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR TCA 90 bp ATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IDQHLCTYSTPCSRMQGYRSLSR*PSGESW
Trigger: CCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCG...GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp TATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAATTCCGGGAATACGATaGGGACCCAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: YGKGRPQPGSQRCHSFCPIPGIR*GPNNRE
Trigger: TTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAAT...TGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCAGACGGCCAAGTCCTCTaGCTCTGCCACTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQADGQVL*LCHCLN
Trigger: GTTGAGGCAGTGGCAGAGGCAGAGGACTTGGCCGTC...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp CCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTG +
Preference number: 4 (lower is better)
Translates to: PQPGSQRCHSFCPANTIVRCHSF*PANTIV
Trigger: CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT...CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CCA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCAGCTAGGGACCTGCCGTaGAGTGGCCCAAAAATACAC +
Preference number: 4 (lower is better)
Translates to: HVCQASLKLLTSGDLPASARDLP*SGPKIH
Trigger: GTGTATTTTTGGGCCACTCCACGGCAGGTCCCTAGC...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCAATTAGCTGGGCGTGGTaGGGGAGCGCCTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAISWAW*GSACNP
Trigger: GGGATTACAGGCGCTCCCCCACCACGCCCAGCTAAT...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp ATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGAAGAAAAGCAGAAAGTaGACATCGACCAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: MVKVAPSPVARDATLSAQKKSRK*TSTSTC
Trigger: ACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCTT...CTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp GTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAACCCAGCCTCGCGCCTaGGGAGGAAGACAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: VRTVHLAAECKVTSSYGKTQPRA*GGRQFP
Trigger: GGGGAACTGTCTTCCTCCGCAGGCGCGAGGCTGGGT...TTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp CATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTG +
Preference number: 4 (lower is better)
Translates to: HPMVKVAPSPVARDATLSRCHSF*PANTIV
Trigger: CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT...AGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp AGAAAAGCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAACAGAGAAGAGAGTaGCGACCGCTGAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RKAESGHRPAPVYVQYTLQQRRE*RPLRGV
Trigger: CACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTG...CAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp CCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCAAGAAAAGCAGAAAGTaGACATCGACCAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: PSPVARDATLSAQLTPLCKKSRK*TSTSTC
Trigger: ACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCTT...GCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp CTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGCTATGGGGCACCGTCTaGTTCCGGGAATACGATGCG +
Preference number: 4 (lower is better)
Translates to: LCTYSTPCSRMQGYFILWLWGTV*FREYDA
Trigger: CGCATCGTATTCCCGGAATCAGACGGTGCCCCATAG...CCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTRSLSR*PSGESW
Trigger: CCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCG...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp CATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTTCAGGTCCCATACTCTaGGAGTTTTGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HPMVKVAPSPVARDATLSSGPIL*EFCLLK
Trigger: CTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGA...AGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp TCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGCATACTGTACACCCAATTCTaGTGCCCCCTCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: SFCPANTIVRLCASGASILYTQF*CPLNTF
Trigger: GAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAG...TATGCTGGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR TCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCACTGCTGACCTCAGGTaGTTTGCCCGCCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTTADLR*FARLTQ
Trigger: TTGGGTGAGGCGGGCAAATCACCTGAGGTCAGCAGT...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCGCACTCGGGGAGCCCTaGATGAATTCTAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTALGEP*MNSRAA
Trigger: CGCTGCTCTAGAATTCATTCAGGGCTCCCCGAGTGC...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAACCCAGCCTCGCGCCTaGGGAGGAAGACAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSTQPRA*GGRQFP
Trigger: GGGGAACTGTCTTCCTCCGCAGGCGCGAGGCTGGGT...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCAATAGGTGTGGGCCACTaGGCCCGGCCAGTGTATTTT +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAIGVGH*ARPVYF
Trigger: AAAATACACTGGCCGGGCGCAGTGGCCCACACCTAT...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp TATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCACAATCACACCAATATTaGTGCCACCACTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: YGKGRPQPGSQRCHSFCPQSHQY*CHHCFT
Trigger: AGTAAAGCAGTGGTGGCAGCAATATTGGTGTGATTG...TGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp CCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCAATCACACCAATATTaGTGCCACCACTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: PQPGSQRCHSFCPANTIVQSHQY*CHHCFT
Trigger: AGTAAAGCAGTGGTGGCAGCAATATTGGTGTGATTG...CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp GACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCCCTGTGTGCGAGTGGTaGCAGCATAACCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: DQHLCTYSTPCSRMQGYFPVCEW*QHNLNH
Trigger: GTGATTGAGGTTATGCTGGCACCACTCGCACACAGG...GAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp ACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTCACCTTGCAGCCGAATaGAAGGTTACTTCATCCTAT +
Preference number: 4 (lower is better)
Translates to: TSSYGKGRPQPGSQRCHSHLAAE*KVTSSY
Trigger: ATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTG...AGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCTTCTTACGCCTGTGCTaGCTGGCTGACGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTFLRLC*LADGQV
Trigger: GACTTGGCCGTCAGCCAGCCAGCACAGGCGTAAGAA...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp CCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGATCTTGTCCAAATCTaGAGCGATGCCATTCTATAT +
Preference number: 4 (lower is better)
Translates to: PSPVARDATLSAQLTPLCDLVQI*SDAILY
Trigger: ATATAGAATGGCATCGCTTCAGATTTGGACAAGATC...GCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR TCA 90 bp GGTTTTCACGAGAAGAGGTGGCAAACAGGTGAACATCTCACAGAATGTAGCTTCGGAATCGGCAGCTCCTaGACTTCTTGGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: GFHEKRWQTGEHLTECSFGIGSS*TSWVGI
Trigger: GATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCC...GAAGCTACATTCTGTGAGATGTTCACCTGTTTGCCACCTCTTCTCGTGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAACTCCCGGCCTTAAGTaGCCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSTPGLK*PTCLGL
Trigger: GAGGCCAAGGCAGGTGGGTCACTTAAGGCCGGGAGT...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCACGAGGTCAGGAGTTTaGGACCAGTCTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTTRSGV*DQSGQQ
Trigger: CTGTTGGCCAGACTGGTCTCAAACTCCTGACCTCGT...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCCCCTCGGGGGAAAGCTaGCCATCTATGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSPSGES*PSMGHR
Trigger: ACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGG...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp AGCTGTACACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCCCTCGGGGGAAAGCTaGCCATCTATGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: SCTPNSDAPSILSSCFHHPSGES*PSMGHR
Trigger: ACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGG...ATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR CCA 90 bp CCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCACCACTGCTTTACTaGCTCCGACTGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: PAPVYVQYTLQPNARLLHPPLLY*LRLNTA
Trigger: TGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTGGTGG...ATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTCTATGGGGCACCGTCTaGTTCCGGGAATACGATGCG +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSLWGTV*FREYDA
Trigger: CGCATCGTATTCCCGGAATCAGACGGTGCCCCATAG...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSRSLSR*PSGESW
Trigger: CCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCG...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp GACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATTCCGGGAATACGATaGGGACCCAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: DQHLCTYSTPCSRMQGYFIPGIR*GPNNRE
Trigger: TTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAAT...GAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTTGCAGGCTAGGGACCTaGCGTGGAGTGGCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSCRLGT*RGVAQK
Trigger: TTTTTGGGCCACTCCACGGCAGGTCCCTAGCCTGCA...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCAACCACCATAAGAGCTaGTGCACTCGGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ICLWCTINLTMETERKYSNHHKS*CTRGAL
Trigger: CAGGGCTCCCCGAGTGCAGCAGCTCTTATGGTGGTT...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp TCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGCATACAATCACACCAATATTaGTGCCACCACTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: SFCPANTIVRLCASGASIQSHQY*CHHCFT
Trigger: AGTAAAGCAGTGGTGGCAGCAATATTGGTGTGATTG...TATGCTGGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR GCA 90 bp AAGAAAAGCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTCATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC +
Preference number: 4 (lower is better)
Translates to: KKSRKWTSTSTCVRTVHLHCAPV*EWCQHN
Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...AAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp AAAGAAAAGCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTCATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC +
Preference number: 4 (lower is better)
Translates to: KEKQKVDIDQHLCTYSTPHCAPV*EWCQHN
Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...AGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp ATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACACGTACAGTACACCTTaGAGCCGAATGCAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: IDQHLCTYSTPCSRMQGYTYSTP*SRMQGY
Trigger: GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGT...GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAACAACAGAGAAGAGAGTaGCGACCGCTGAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEQQRRE*RPLRGV
Trigger: CACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTG...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCACCTGAACTTCTTGGGTaGGCATCACTCTTCGGATTG +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAPELLG*ASLFGL
Trigger: CAATCCGAAGAGTGATGCCCACCCAAGAAGTTCAGG...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 72 bp TTTTGGTCTTGCCGACCCAAGAGCAGTGTAAACCAGTaGAATCCAACTGCATCACAGTCACAGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FWSCRPKSSVNQ*NPTASQSQQAG
Trigger: TCCTGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGGTCGGCAAGACCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 72 bp GGACATCGACCAGCACCTGTGTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTACTTCATCCTATGGTA +
Preference number: 4 (lower is better)
Translates to: GHRPAPVYVQYT*QPNARLLHPMV
Trigger: TACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTCTATGGGGCACCGTCTaGTTCCGGGAATACGATGCG +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESLWGTV*FREYDA
Trigger: CGCATCGTATTCCCGGAATCAGACGGTGCCCCATAG...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp AGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCCTGTACACCCAATTCTaGTGCCCCCTCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: STCVRTVHLAAECKVTSSLYTQF*CPLNTF
Trigger: GAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAG...GGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp CAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCTTTACTGGCTCCGACTaGACACAGCATAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: QYTLQPNARLLHPMVKVAFTGSD*TQHRRV
Trigger: GACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAA...GGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAACTGCTGACCTCAGGTaGTTTGCCCGCCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSTADLR*FARLTQ
Trigger: TTGGGTGAGGCGGGCAAATCACCTGAGGTCAGCAGT...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp TCAACTAGCCTCCCACCCTCCATTAATTCAAAGTGTATTGTAATTATCACATGTACCCAGCCTCGCGCCTaGGGAGGAAGACAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: STSLPPSINSKCIVIITCTQPRA*GGRQFP
Trigger: GGGGAACTGTCTTCCTCCGCAGGCGCGAGGCTGGGT...ACATGTGATAATTACAATACACTTTGAATTAATGGAGGGTGGGAGGCTAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CCA 90 bp AAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGACCAACAACAGAGAAGAGAGTaGCGACCGCTGAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: KCTGPAGTQNFKNSKLDQQQRRE*RPLRGV
Trigger: CACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTG...TTGGTCCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGCTATGGGGCACCGTCTaGTTCCGGGAATACGATGCG +
Preference number: 4 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWLWGTV*FREYDA
Trigger: CGCATCGTATTCCCGGAATCAGACGGTGCCCCATAG...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp TGTACACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCTTCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CTPNSDAPSILSSCFHHLRSLSR*PSGESW
Trigger: CCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCG...AAGATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR TCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCCTGTACACCCAATTCTaGTGCCCCCTCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTLYTQF*CPLNTF
Trigger: GAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAG...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp CTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTCACACCAATATTGCTaGCACCACTGCTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: LCTYSTPCSRMQGYFILWSHQYC*HHCFTG
Trigger: GCCAGTAAAGCAGTGGTGGCAGCAATATTGGTGTGA...CCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp CCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGTCACACCAATATTGCTaGCACCACTGCTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: PVYVQYTLQPNARLLHPMSHQYC*HHCFTG
Trigger: GCCAGTAAAGCAGTGGTGGCAGCAATATTGGTGTGA...CATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp ACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTG +
Preference number: 4 (lower is better)
Translates to: TVHLAAECKVTSSYGKGRRCHSF*PANTIV
Trigger: CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT...GCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTGGACCTGCCGTGGAGTaGCCCAAAAATACACACTTC +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSGPAVE*PKNTHF
Trigger: GAAGTGTGTATTTTTGGGCCACTCCACGGCAGGTCC...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAAGCTAGGGACCTGCCGTaGAGTGGCCCAAAAATACAC +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEARDLP*SGPKIH
Trigger: GTGTATTTTTGGGCCACTCCACGGCAGGTCCCTAGC...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAACAACAAAAATTAGCTaGGCGTGGTGGGGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSTTKIS*AWWGSA
Trigger: GGCGCTCCCCCACCACGCCCAGCTAATTTTTGTTGT...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp CTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTGACGTAAGATATCTCTaGAATCTGAAAGAATTCCAA +
Preference number: 4 (lower is better)
Translates to: LHPMVKVAPSPVARDATLDVRYL*NLKEFQ
Trigger: TTGGAATTCTTTCAGATTCCAGAGATATCTTACGTC...AAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579733.5
CDS-3UTR TCA 90 bp AGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAAATACATCCCATATTTTaGTACGCCCATTGTTCAACC +
Preference number: 4 (lower is better)
Translates to: RKWTSTSTCVRTVHLAAEIHPIF*YAHCST
Trigger: GGTTGAACAATGGGCGTATCAAAATATGGGATGTAT...TTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR TCA 90 bp AAGAAAAGCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTTTTACTGGCTCCGACTaGACACAGCATAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: KKSRKWTSTSTCVRTVHLFTGSD*TQHRRV
Trigger: GACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAA...AAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR GCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCGAACAAGCTTTACTGTaGGATGTCCTTGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTEQALL*DVLVTK
Trigger: CTTGGTCACAAGGACATCGCACAGTAAAGCTTGTTC...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCAAGGAACCCACCACCATaGCCAGCTAATTTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQARNPPP*PANFCN
Trigger: ATTACAAAAATTAGCTGGGCATGGTGGTGGGTTCCT...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCTTCAAGCAATTCTCTTaGCTCAGCCTCCTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTFKQFS*LSLLSS
Trigger: GCTACTTAGGAGGCTGAGGCAAGAGAATTGCTTGAA...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCTGTAGCTTCCAAAAATaGTGTTTTGGGCCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: CLWCTINLTMETERKYSTCSFQK*CFGPGS
Trigger: CGAACCTGGCCCAAAACAGCATTTTTGGAAGCTACA...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCCCAGTTGAATCCAACTaGATCACAGTCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ICLWCTINLTMETERKYSPVESN*ITVTAG
Trigger: GCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGG...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTATTTTCTTACGCCTGTaGTGGCTGGCTGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESIFLRL*WLADGQ
Trigger: TTGGCCGTCAGCCAGCCAGCACAGGCGTAAGAAAAT...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp AAAGAAAAGCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTACGTACAGTACACCTTaGAGCCGAATGCAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: KEKQKVDIDQHLCTYSTPTYSTP*SRMQGY
Trigger: GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGT...AGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CCA 90 bp TCATCAATAAGCATAACCCTCTTAACAGTCACTTTACTTAAGCTGTCTATAGGTCCCTCGGGGGAAAGCTaGCCATCTATGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: SSISITLLTVTLLKLSIGPSGES*PSMGHR
Trigger: ACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGG...ACCTATAGACAGCTTAAGTAAAGTGACTGTTAAGAGGGTTATGCTTATTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGGACCTGCCGTGGAGTaGCCCAAAAATACACACTTC +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSGPAVE*PKNTHF
Trigger: GAAGTGTGTATTTTTGGGCCACTCCACGGCAGGTCC...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp CCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAGCAAGAAGTAGCTaGTCTTGTCCAAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: PVYVQYTLQPNARLLHPMVARSS*SCPNLK
Trigger: CTTCAGATTTGGACAAGATCAGCTACTTCTTGCTAC...CATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR TCA 90 bp CGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTTCAGGTCCCATACTCTaGGAGTTTTGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RTVHLAAECKVTSSYGKGSGPIL*EFCLLK
Trigger: CTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGA...ACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp GGTTTTCACGAGAAGAGGTGGCAAACAGGTGAACATCTCACAGAATGTAGCTTCACTTCCAGATCAGTCTaGCACTCTCCAACAAAACCA +
Preference number: 4 (lower is better)
Translates to: GFHEKRWQTGEHLTECSFTSRSV*HSPTKP
Trigger: TGGTTTTGTTGGAGAGTGTCAGACTGATCTGGAAGT...GAAGCTACATTCTGTGAGATGTTCACCTGTTTGCCACCTCTTCTCGTGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCTCGGGGAGCCCTGAATaGATTCTAGAGCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LPYFPLVLQSVITVITFFSGSPE*ILEQRL
Trigger: CAGGCGCTGCTCTAGAATTCATTCAGGGCTCCCCGA...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATAAGGTGGAGGCTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIRWRLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAGCCTCCACCT...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp TGTACACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCTTGGAGTTTTCAAGTTCTaGAGGCACTGGGACCACGGA +
Preference number: 4 (lower is better)
Translates to: CTPNSDAPSILSSCFHHLGVFKF*RHWDHG
Trigger: TCCGTGGTCCCAGTGCCTTCAGAACTTGAAAACTCC...AAGATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR GCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTATTCCGGGAATACGATaGGGACCCAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSIPGIR*GPNNRE
Trigger: TTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAAT...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp CGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTGAACAAGCTTTACTGTaGGATGTCCTTGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: RTVHLAAECKVTSSYGKGEQALL*DVLVTK
Trigger: CTTGGTCACAAGGACATCGCACAGTAAAGCTTGTTC...ACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR GCA 90 bp GAAGCTGACACCAGGATCAAGCTTCCATCTGGAGCAAAAGTTAAATCTCTGACCGAACAAGCTTTACTGTaGGATGTCCTTGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: EADTRIKLPSGAKVKSLTEQALL*DVLVTK
Trigger: CTTGGTCACAAGGACATCGCACAGTAAAGCTTGTTC...GGTCAGAGATTTAACTTTTGCTCCAGATGGAAGCTTGATCCTGGTGTCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR GCA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCTACCCACCGGTCATTTaGTCCTCCAGCAAATATTGG +
Preference number: 4 (lower is better)
Translates to: ICLWCTINLTMETERKYSYPPVI*SSSKYW
Trigger: CCAATATTTGCTGGAGGAGCAAATGACCGGTGGGTA...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTATGCGACATAAATGTTaGAGGCTAGGGACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESMRHKC*RLGTCR
Trigger: ACGGCAGGTCCCTAGCCTGCAACATTTATGTCGCAT...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTTTGTCCAGGTTGGAGTaGAGTGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESLSRLE*SGVILA
Trigger: AGCCAAGATCACACCACTGCACTCCAACCTGGACAA...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAAGCAGCGCCTGAGTCCTaGATTCTTTCTTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEAAPES*ILSSLS
Trigger: GGACAATGAAGAAAGAATGCAGGACTCAGGCGCTGC...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTGGAAAACTGCTTTACTaGCTCCGACTGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSGKLLY*LRLNTA
Trigger: TGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTTTTCC...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTCCTGAACTTCTTGGGTaGGCATCACTCTTCGGATTG +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESPELLG*ASLFGL
Trigger: CAATCCGAAGAGTGATGCCCACCCAAGAAGTTCAGG...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCCAGGTTGGAGTGCAGTaGTGTGATCTTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSQVGVQ*CDLGLL
Trigger: CAGTAAGCCAAGATCACACCACTGCACTCCAACCTG...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCATCAAGCTCTACGTCTTaGATGACATTCCTAAGGATA +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQASSSTS*MTFLRI
Trigger: TATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGA...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAAAGTTTGAGACCAGTCTaGCCAACAGTGAAACGCCGT +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAESLRPV*PTVKRR
Trigger: ACGGCGTTTCACTGTTGGCCAGACTGGTCTCAAACT...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp ACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCCTTTTCTACGCCTGTGCTGGCTaGCTGACGGCCAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TFKLYVLDDIPKDNKILFYACAG*LTAKSS
Trigger: AGAGGACTTGGCCGTCAGCCAGCCAGCACAGGCGTA...GAAAAGGATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp TCATCAATAAGCATAACCCTCTTAACAGTCACTTTACTTAAGCTGTCTATAGGTCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSISITLLTVTLLKLSIGRSLSR*PSGESW
Trigger: CCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCG...ACCTATAGACAGCTTAAGTAAAGTGACTGTTAAGAGGGTTATGCTTATTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp GTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAACTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VRTVHLAAECKVTSSYGKLTTSV*STKLRR
Trigger: CCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAG...TTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR TCA 90 bp ATGCACAGCTGTACACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCTCAGGTCCCATACTCTaGGAGTTTTGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MHSCTPNSDAPSILSSCFSGPIL*EFCLLK
Trigger: CTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGA...GAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAGCTGTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR TCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTCTGTACACCCAATTCTaGTGCCCCCTCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESLYTQF*CPLNTF
Trigger: GAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAG...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATTTACTGGCTCCGACTaGACACAGCATAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEFTGSD*TQHRRV
Trigger: GACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAA...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCATTTACTGGCTCCGACTaGACACAGCATAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSFTGSD*TQHRRV
Trigger: GACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAA...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTGCTACCACATCATGGTaGTGTCCTTCTAGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESATTSW*CPSSFR
Trigger: ACGGAAACTAGAAGGACATCACCATGATGTGGTAGC...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCGCTACCACATCATGGTaGTGTCCTTCTAGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSATTSW*CPSSFR
Trigger: ACGGAAACTAGAAGGACATCACCATGATGTGGTAGC...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp CACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCTTTCAGATTCCGGGAATACGATaGGGACCCAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: HPILMPPQYFHHVSIIFQIPGIR*GPNNRE
Trigger: TTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAAT...CTGAAAGATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR GCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCATACCCACCGGTCATTTaGTCCTCCAGCAAATATTGG +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSYPPVI*SSSKYW
Trigger: CCAATATTTGCTGGAGGAGCAAATGACCGGTGGGTA...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCGCAAGGCTTGCAACATaGAGTCCATCATGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: ICLWCTINLTMETERKYSARLAT*SPSWLK
Trigger: TTTTAGCCATGATGGACTGCATGTTGCAAGCCTTGC...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCACATTTTATTAGTTGCTaGCAACAGCTCTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAHFISC*QQLLLL
Trigger: CAGAAGTAAGAGCTGTTGGCAGCAACTAATAAAATG...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGGAAAACTGCTTTACTaGCTCCGACTGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSGKLLY*LRLNTA
Trigger: TGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTTTTCC...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAAGAAACTCCAAAAGCTTaGAAGGAATCGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEETPKA*KESAAP
Trigger: AGGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTC...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCATTTCTAGTTATATCCTaGCTCTGCCTTCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAFLVIS*LCLLCC
Trigger: ACAACAAAGAAGGCAGAGCCAGGATATAACTAGAAA...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAACACTGGCACTCACTATaGTTTTCACGAGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEHWHSL*FSREEV
Trigger: CACCTCTTCTCGTGAAAACCATAGTGAGTGCCAGTG...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCACTGTTCAGAATTACTTaGGTAAAATGCTATGTCACC +
Preference number: 4 (lower is better)
Translates to: PKSSVNQLNPTASQSQQALFRIT*VKCYVT
Trigger: GGTGACATAGCATTTTACCCAAGTAATTCTGAACAG...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESLTTSV*STKLRR
Trigger: CCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAG...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp CACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCTTTCAGCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HPILMPPQYFHHVSIIFQLTTSV*STKLRR
Trigger: CCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAG...CTGAAAGATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR TCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCTCAGGTCCCATACTCTaGGAGTTTTGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSSGPIL*EFCLLK
Trigger: CTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGA...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR TCA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGCTGTACACCCAATTCTaGTGCCCCCTCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWLYTQF*CPLNTF
Trigger: GAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAG...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp GTACACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCTTTCTGTACACCCAATTCTaGTGCCCCCTCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: VHPILMPPQYFHHVSIIFLYTQF*CPLNTF
Trigger: GAAAGTATTGAGGGGGCATCAGAATTGGGTGTACAG...AAAGATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR TCA 90 bp AAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGACCAATTTACTGGCTCCGACTaGACACAGCATAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: KCTGPAGTQNFKNSKLDQFTGSD*TQHRRV
Trigger: GACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAA...TTGGTCCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCTGGAGTGCAGTGGTGTaGTCTTGGCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: LPYFPLVLQSVITVITFFWSAVV*SWLTAT
Trigger: GGTTGCAGTAAGCCAAGATCACACCACTGCACTCCA...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp TCATCAATAAGCATAACCCTCTTAACAGTCACTTTACTTAAGCTGTCTATAGGTTGCTGCCACCACCTGTaGCAGGGAAAGCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSISITLLTVTLLKLSIGCCHHL*QGKQEA
Trigger: TGCTTCTTGCTTTCCCTGTCACAGGTGGTGGCAGCA...ACCTATAGACAGCTTAAGTAAAGTGACTGTTAAGAGGGTTATGCTTATTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR GCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCATCATCAGCAAGGCTTaGAACATGCAGTCCATCATG +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSIISKA*NMQSIM
Trigger: CATGATGGACTGCATGTTGCAAGCCTTGCTGATGAT...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTATCATCAGCAAGGCTTaGAACATGCAGTCCATCATG +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESIISKA*NMQSIM
Trigger: CATGATGGACTGCATGTTGCAAGCCTTGCTGATGAT...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCACTCTTCGGATTGACATaGGACATAAATGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSLFGLT*DINVAG
Trigger: GCCTGCAACATTTATGTCGCATGTCAATCCGAAGAG...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTCTCTTCGGATTGACATaGGACATAAATGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESLFGLT*DINVAG
Trigger: GCCTGCAACATTTATGTCGCATGTCAATCCGAAGAG...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAAAATATTGGAGTAGGTaGGGGAAACAGGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSKYWSR*GKQVPK
Trigger: TTTGGGCACCTGTTTCCCCCACCTACTCCAATATTT...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCTTTCACGAGAAGAGGTaGCAAACAGGTGAACATCTC +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSFHEKR*QTGEHL
Trigger: GAGATGTTCACCTGTTTGCCACCTCTTCTCGTGAAA...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCACAAATGACAGGCTTGTaGCAAAATAGGAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSQMTGL*QNRRGS
Trigger: ACTGCCTCTCCTATTTTGCCACAAGCCTGTCATTTG...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTGATCTTGTCCAAATCTaGAGCGATGCCATTCTATAT +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSDLVQI*SDAILY
Trigger: ATATAGAATGGCATCGCTTCAGATTTGGACAAGATC...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAAGTAGCAAGAAGTAGCTaGTCTTGTCCAAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEVARSS*SCPNLK
Trigger: CTTCAGATTTGGACAAGATCAGCTACTTCTTGCTAC...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGACCAATCAGGTCCCATACTCTaGGAGTTTTGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KCTGPAGTQNFKNSKLDQSGPIL*EFCLLK
Trigger: CTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGA...TTGGTCCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTCCTCAAGAAGTAACTTaGGCAGATTTTCTACTGGCT +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESPQEVT*ADFLLA
Trigger: AGCCAGTAGAAAATCTGCTCAAGTTACTTCTTGAGG...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAAAGCTGTTTTTACTTaGCTGGATATGTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSKAVFT*LDMLVW
Trigger: CCACACCAACATATCCAGTCAAGTAAAAACAGCTTT...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTATGGTTTCAGGCTCGTaGAACTTCTCATGCTATTTT +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSMVSGS*NFSCYF
Trigger: AAAATAGCATGAGAAGTTTCACGAGCCTGAAACCAT...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGGAACAAGCTTTACTGTaGGATGTCCTTGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWEQALL*DVLVTK
Trigger: CTTGGTCACAAGGACATCGCACAGTAAAGCTTGTTC...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR GCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTGCAGATATGCTGTATTaGTTCTTTGGCAACTCACCA +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESADMLY*FFGNSP
Trigger: TGGTGAGTTGCCAAAGAAGCAATACAGCATATCTGC...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp TGTATTGCTTCTTTGGCAACTCACCAATATCATCCCCTGCAGAAACAGAGTTTTAAATATTGGAGTAGGTaGGGGAAACAGGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CIASLATHQYHPLQKQSFKYWSR*GKQVPK
Trigger: TTTGGGCACCTGTTTCCCCCACCTACTCCAATATTT...AAAACTCTGTTTCTGCAGGGGATGATATTGGTGAGTTGCCAAAGAAGCAATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCTGCTTAATTTGCCTGTaGTGTACCATCAACCTTACA +
Preference number: 4 (lower is better)
Translates to: ICLWCTINLTMETERKYSCLICL*CTINLT
Trigger: TGTAAGGTTGATGGTACACCACAGGCAAATTAAGCA...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCCCAAAAATGCTGTTTTaGGCCAGGTTCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPYFPLVLQSVITVITFFPKMLF*ARFGGS
Trigger: TGAGCCACCGAACCTGGCCCAAAACAGCATTTTTGG...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTATACATCCCATATTTTaGTACGCCCATTGTTCAACC +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESIHPIF*YAHCST
Trigger: GGTTGAACAATGGGCGTATCAAAATATGGGATGTAT...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCATTCCGGGAATACGATaGGGACCCAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPYFPLVLQSVITVITFFIPGIR*GPNNRE
Trigger: TTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAAT...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp AGAGCTGGTAAACAACTACAAGAGTTCATCAATAAGCATAACCCTCTTAACAGTATTCCGGGAATACGATaGGGACCCAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: RAGKQLQEFINKHNPLNSIPGIR*GPNNRE
Trigger: TTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAAT...ACTGTTAAGAGGGTTATGCTTATTGATGAACTCTTGTAGTTGTTTACCAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCAGGTGCAACTTGCACTaGATAATCCTCATCAATTCT +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSRCNLH*IILINS
Trigger: AGAATTGATGAGGATTATCCAGTGCAAGTTGCACCT...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCGAAACTCCAAAAGCTTaGAAGGAATCGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPYFPLVLQSVITVITFFETPKA*KESAAP
Trigger: AGGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTC...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAAATCTTCCTTTCACACTaGCACTCACTATGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEIFLSH*HSLWFS
Trigger: TGAAAACCATAGTGAGTGCCAGTGTGAAAGGAAGAT...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp TCATCAATAAGCATAACCCTCTTAACAGTCACTTTACTTAAGCTGTCTATAGGTCACGTACTGCTTTACTaGCTCCGACTGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: SSISITLLTVTLLKLSIGHVLLY*LRLNTA
Trigger: TGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTACGTG...ACCTATAGACAGCTTAAGTAAAGTGACTGTTAAGAGGGTTATGCTTATTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGATACATCCCATATTTTaGTACGCCCATTGTTCAACC +
Preference number: 4 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWIHPIF*YAHCST
Trigger: GGTTGAACAATGGGCGTATCAAAATATGGGATGTAT...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp AGAGCTGGTAAACAACTACAAGAGTTCATCAATAAGCATAACCCTCTTAACAGTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAGKQLQEFINKHNPLNSLTTSV*STKLRR
Trigger: CCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAG...ACTGTTAAGAGGGTTATGCTTATTGATGAACTCTTGTAGTTGTTTACCAGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp AACGTCACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCTCAGGTCCCATACTCTaGGAGTTTTGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: NVTFKLYVLDDIPKDNKISGPIL*EFCLLK
Trigger: CTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGA...GATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGTGACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGACCAAAATGTACAAGAACTTTaGCACGTACTGCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: KCTGPAGTQNFKNSKLDQNVQEL*HVLLYW
Trigger: CCAGTAAAGCAGTACGTGTCAAAGTTCTTGTACATT...TTGGTCCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR GCA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTAAGATACTTTTCTCTTaGTTAGTAGTCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESKILFS*LVVTFL
Trigger: CAGGAAGGTGACTACTAAGCAAGAGAAAAGTATCTT...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR GCA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCTTGCATTTTATTAGTTaGTGCCAACAGCTCTTACTT +
Preference number: 4 (lower is better)
Translates to: ICLWCTINLTMETERKYSLHFIS*CQQLLL
Trigger: AAGTAAGAGCTGTTGGCAGCAACTAATAAAATGCAA...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTCTTCAAAATCACACATaGCTCATAAGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSLQNHT*LIRVLL
Trigger: AAGCAAAACTCTTATGAGCCATGTGTGATTTTGAAG...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCTTCCCTATTTTCCTTTaGTCCTTCAGTCTGTTATTA +
Preference number: 4 (lower is better)
Translates to: ICLWCTINLTMETERKYSFPIFL*SFSLLL
Trigger: TAATAACAGACTGAAGGACCAAAGGAAAATAGGGAA...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 72 bp AACATAAATGATCTGCCAGTTCTCCAAATGACAGGCTaGTGGCAAAATAGGAGAGGCAGTGTCATTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NINDLPVLQMTG*WQNRRGSVIFK
Trigger: TTTGAAAATGACACTGCCTCTCCTATTTTGCCACAAGCCTGTCATTTGGAGAACTGGCAGATCATTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AGAGCTGGTAAACAACTACAAGAGTTCATCAATAAGCATAACCCTCTTAACAGTGTAGCAAGAAGTAGCTaGTCTTGTCCAAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: RAGKQLQEFINKHNPLNSVARSS*SCPNLK
Trigger: CTTCAGATTTGGACAAGATCAGCTACTTCTTGCTAC...ACTGTTAAGAGGGTTATGCTTATTGATGAACTCTTGTAGTTGTTTACCAGCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR TCA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATACTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NFLALYSKDTYCGSTEAILTTSV*STKLRR
Trigger: CCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAG...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATAGCAAGGCTTGCAACATaGAGTCCATCATGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIARLAT*SPSWLK
Trigger: TTTTAGCCATGATGGACTGCATGTTGCAAGCCTTGC...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR GCA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATACACAGCAAAGACCATTaGTCAAAGGTGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIHSKDH*SKVQLA
Trigger: TGCAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTG...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAACTAGTTTCCGTATCATaGTGTATTTATCCATATTCC +
Preference number: 4 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAELVSVS*CIYPYS
Trigger: GGAATATGGATAAATACACCATGATACGGAAACTAG...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCCTAGTTTCCGTATCATaGTGTATTTATCCATATTCC +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSLVSVS*CIYPYS
Trigger: GGAATATGGATAAATACACCATGATACGGAAACTAG...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CCA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCCTGGATATGTTGGTGTaGAAAGCAAAAATAATGCAA +
Preference number: 4 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSLDMLV*KAKIMQ
Trigger: TTGCATTATTTTTGCTTTCCACACCAACATATCCAG...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AGAGCTGGTAAACAACTACAAGAGTTCATCAATAAGCATAACCCTCTTAACAGTGATCTTGTCCAAATCTaGAGCGATGCCATTCTATAT +
Preference number: 4 (lower is better)
Translates to: RAGKQLQEFINKHNPLNSDLVQI*SDAILY
Trigger: ATATAGAATGGCATCGCTTCAGATTTGGACAAGATC...ACTGTTAAGAGGGTTATGCTTATTGATGAACTCTTGTAGTTGTTTACCAGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CCA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCAGGTGCAACTTGCACTaGATAATCCTCATCAATTCT +
Preference number: 4 (lower is better)
Translates to: LPYFPLVLQSVITVITFFRCNLH*IILINS
Trigger: AGAATTGATGAGGATTATCCAGTGCAAGTTGCACCT...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 72 bp ATCCAAGTCCATAATCAACGTCTTCCCTATTTTCCTTaGGTCCTTCAGTCTGTTATTACTGTTATTACCTTC +
Preference number: 4 (lower is better)
Translates to: IQVHNQRLPYFP*VLQSVITVITF
Trigger: GAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAGACGTTGATTATGGACTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
3UTR CAA 72 bp ATGTATTATCATAAGCCACAGTCTGTTCAGAATTACTaGGGTAAAATGCTATGTCACCTACAAACCCTCATC +
Preference number: 4 (lower is better)
Translates to: MYYHKPQSVQNY*GKMLCHLQTLI
Trigger: GATGAGGGTTTGTAGGTGACATAGCATTTTACCCAAGTAATTCTGAACAGACTGTGGCTTATGATAATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATACATGTAGCTAGAATCTaGTCCAAGTCCATAATCAAC +
Preference number: 4 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIHVARI*SKSIIN
Trigger: GTTGATTATGGACTTGGATCAGATTCTAGCTACATG...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR TCA 90 bp AGAGCTGGTAAACAACTACAAGAGTTCATCAATAAGCATAACCCTCTTAACAGTCATTTAAAATATTCATaGCACCGAGCACAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RAGKQLQEFINKHNPLNSHLKYS*HRAQTS
Trigger: TGAAGTCTGTGCTCGGTGTCATGAATATTTTAAATG...ACTGTTAAGAGGGTTATGCTTATTGATGAACTCTTGTAGTTGTTTACCAGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR GCA 90 bp AACGTCACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCATTACTTGGGTAAAATaGTATGTCACCTACAAACCC +
Preference number: 4 (lower is better)
Translates to: NVTFKLYVLDDIPKDNKIITWVK*YVTYKP
Trigger: GGGTTTGTAGGTGACATAGCATTTTACCCAAGTAAT...GATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGTGACGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CCA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATAGCTGTATTGCTTCTTTaGCAACTCACCAATATCATC +
Preference number: 4 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIAVLLL*QLTNII
Trigger: GATGATATTGGTGAGTTGCCAAAGAAGCAATACAGC...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS CCA 90 bp CAACAGAGAAGAGAGTGGCGACCGCTGAGGGGCGTGACGCCAAGTTaGTCCCTCCCGGGCCCAGGGACAGAGGAGACGGGCGGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: QQRREWRPLRGVTPS*SLPGPGTEETGGGG
Trigger: GCCGCCCCCGCCCGTCTCCTCTGTCCCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS GCA 90 bp GGACAGAGGAGACGGGCGGGGGCGGCCGCTGCGGCTTCTGCTAACTaGCTCGGGAAAGCTCCCGAAGGCCTCAGACCAAAGTACGGAGTC +
Preference number: 5 (lower is better)
Translates to: GQRRRAGAAAAASAN*LGKAPEGLRPKYGV
Trigger: GACTCCGTACTTTGGTCTGAGGCCTTCGGGAGCTTTCCCGAGGCAGTTAGCAGAAGCCGCAGCGGCCGCCCCCGCCCGTCTCCTCTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS-3UTR CAA 90 bp CATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGGGCGTGACGCCAAGTaGGTCCCTCCCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HPMVKVAPSPVARDATLSGRDAK*VPPGPR
Trigger: CCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCC...AGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CAA 90 bp GGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCGCCCAGCTAACACCATaGTGCGCCTGTGTGCGAGTG +
Preference number: 5 (lower is better)
Translates to: GRPQPGSQRCHSFCPANTAQLTP*CACVRV
Trigger: CACTCGCACACAGGCGCACAATGGTGTTAGCTGGGC...GGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS CCA 90 bp TCTGATTCCGGGAATACGATGCGGACCCAACAACAGAGAAGAGAGTaGCGACCGCTGAGGGGCGTGACGCCAAGTTGGTCCCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SDSGNTMRTQQQRRE*RPLRGVTPSWSLPG
Trigger: GCCCGGGAGGGACCAACTTGGCGTCACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAATCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS-3UTR CAA 90 bp GTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGGCGTGACGCCAAGTaGGTCCCTCCCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VDIDQHLCTYSTPCSRMQGRDAK*VPPGPR
Trigger: CCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCC...TTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CAA 90 bp GTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCACCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VAPSPVARDATLSAQLTPPISFS*TLGGKL
Trigger: CAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGG...TGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CAA 90 bp TGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCGCCCAGCTAACACCATaGTGCGCCTGTGTGCGAGTG +
Preference number: 5 (lower is better)
Translates to: CHSFCPANTIVRLCASGAAQLTP*CACVRV
Trigger: CACTCGCACACAGGCGCACAATGGTGTTAGCTGGGC...GGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CAA 90 bp TATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCCCAGCTAACACCATaGTGCGCCTGTGTGCGAGTG +
Preference number: 5 (lower is better)
Translates to: YGKGRPQPGSQRCHSFCPAQLTP*CACVRV
Trigger: CACTCGCACACAGGCGCACAATGGTGTTAGCTGGGC...TGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS TCA 90 bp TCCAGCCTGGACGACGGAGCGAGACTCAGTCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGGCCATCTATGGGGCACCGTCTGATT +
Preference number: 5 (lower is better)
Translates to: SSLDDGARLSRSLSR*PSGESWPSMGHRLI
Trigger: AATCAGACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGACTGAGTCTCGCTCCGTCGTCCAGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578312.5
CDS TCA 90 bp CTCGTTGACCCTCGGGGGAAAGCTGGCCATCTATGGGGCACCGTCTaGTTCCGGGAATACGATGCGGACCCAACAACAGAGAAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: LVDPRGKAGHLWGTV*FREYDADPTTEKRV
Trigger: CACTCTCTTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAATCAGACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS-3UTR CAA 90 bp CCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGGCTTGGGTCACCAACTaGAGCCTAGGAAGAGAAACA +
Preference number: 5 (lower is better)
Translates to: PQPGSQRCHSFCPANTIVAWVTN*SLGRET
Trigger: TGTTTCTCTTCCTAGGCTCAAGTTGGTGACCCAAGC...CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579733.5
CDS-3UTR CAA 90 bp TGTATTGCTTCTTTGGCAACTCACCAATATCATCCCCTGCAGAAACAGAGTTTTGGGCGTGACGCCAAGTaGGTCCCTCCCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CIASLATHQYHPLQKQSFGRDAK*VPPGPR
Trigger: CCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCC...AAAACTCTGTTTCTGCAGGGGATGATATTGGTGAGTTGCCAAAGAAGCAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp ATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IDQHLCTYSTPCSRMQGYSISFS*TLGGKL
Trigger: CAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGA...GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR CAA 90 bp TCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCTCAATCACACCAATATaGCTGCCACCACTGCTTTAC +
Preference number: 5 (lower is better)
Translates to: SYGKGRPQPGSQRCHSFCSITPI*LPPLLY
Trigger: GTAAAGCAGTGGTGGCAGCAATATTGGTGTGATTGA...GCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CAA 90 bp TGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCTCAATCACACCAATATaGCTGCCACCACTGCTTTAC +
Preference number: 5 (lower is better)
Translates to: CHSFCPANTIVRLCASGASITPI*LPPLLY
Trigger: GTAAAGCAGTGGTGGCAGCAATATTGGTGTGATTGA...GGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427287.6
ENST00000579733.5
ENST00000583193.5
CDS-3UTR CAA 90 bp AGAGCTGGTAAACAACTACAAGAGTTCATCAATAAGCATAACCCTCTTAACAGTGGGCGTGACGCCAAGTaGGTCCCTCCCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RAGKQLQEFINKHNPLNSGRDAK*VPPGPR
Trigger: CCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCC...ACTGTTAAGAGGGTTATGCTTATTGATGAACTCTTGTAGTTGTTTACCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CAA 90 bp CCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCATTTTGATACGCCCATaGTTCAACCCTGTAGCAAGA +
Preference number: 5 (lower is better)
Translates to: PSPVARDATLSAQLTPLCILIRP*FNPVAR
Trigger: TCTTGCTACAGGGTTGAACAATGGGCGTATCAAAAT...GCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR CAA 90 bp GCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGACATACTCTGAGAGTTTaGTCTCTTGAAGCTGACACC +
Preference number: 5 (lower is better)
Translates to: ARDATLSAQLTPLCACVRHTLRV*SLEADT
Trigger: GGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATG...TCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CAA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCAAGAAACTCCAAAAGCTaGGAAGGAATCGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HVCQASLKLLTSGDLPASRNSKS*EGIGSS
Trigger: GGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTCT...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCACTCCAAATGACAGGCTaGTGGCAAAATAGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: HVCQASLKLLTSGDLPASLQMTG*WQNRRG
Trigger: GCCTCTCCTATTTTGCCACAAGCCTGTCATTTGGAG...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp CTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGCCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LCTYSTPCSRMQGYFILWPISFS*TLGGKL
Trigger: CAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGG...CCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579733.5
CDS-3UTR CAA 90 bp CATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTTCAATCACACCAATATaGCTGCCACCACTGCTTTAC +
Preference number: 5 (lower is better)
Translates to: HPMVKVAPSPVARDATLSSITPI*LPPLLY
Trigger: GTAAAGCAGTGGTGGCAGCAATATTGGTGTGATTGA...AGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS GCA 90 bp CAGTCCATCATGGCTAAAAGATACAGATCGTACCCACCGGTCATTTaGTCCTCCAGCAAATATTGGAGTAGGTGGGGGAAACAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: QSIMAKRYRSYPPVI*SSSKYWSRWGKQVP
Trigger: GGGCACCTGTTTCCCCCACCTACTCCAATATTTGCTGGAGGAGCAAATGACCGGTGGGTACGATCTGTATCTTTTAGCCATGATGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
ENST00000583096.1
CDS GCA 90 bp ACTCTTCGGATTGACATGCGACATAAATGTTGCAGGCTAGGGACCTaGCGTGGAGTGGCCCAAAAATACACACTTCCGTCATGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: TLRIDMRHKCCRLGT*RGVAQKYTLPSCVP
Trigger: TGGGACACATGACGGAAGTGTGTATTTTTGGGCCACTCCACGGCAGGTCCCTAGCCTGCAACATTTATGTCGCATGTCAATCCGAAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS GCA 90 bp TCTTGGGTGGGCATCACTCTTCGGATTGACATGCGACATAAATGTTaGAGGCTAGGGACCTGCCGTGGAGTGGCCCAAAAATACACACTT +
Preference number: 5 (lower is better)
Translates to: SWVGITLRIDMRHKC*RLGTCRGVAQKYTL
Trigger: AAGTGTGTATTTTTGGGCCACTCCACGGCAGGTCCCTAGCCTGCAACATTTATGTCGCATGTCAATCCGAAGAGTGATGCCCACCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS-3UTR CAA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATAGGGCGTGACGCCAAGTaGGTCCCTCCCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIGRDAK*VPPGPR
Trigger: CCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCC...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp CTGAGAGTTTTGTCTCTTGAAGCTGACACCAGGATCAAGCTTCCATCTGGAGCAACGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LRVLSLEADTRIKLPSGATISFS*TLGGKL
Trigger: CAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGT...TGCTCCAGATGGAAGCTTGATCCTGGTGTCAGCTTCAAGAGACAAAACTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR CAA 90 bp ACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTGAATTGGTAACATTCTaGGTGCCATGCAAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: TSSYGKGRPQPGSQRCHSELVTF*VPCKRK
Trigger: CTTTCTCTTGCATGGCACCAAGAATGTTACCAATTC...AGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS TCA 90 bp CGATACGAGAGAAACTCCAAAAGCTTGGAAGGAATCGGCAGCTCCTaGACTTCTTGGGTGGGCATCACTCTTCGGATTGACATGCGACAT +
Preference number: 5 (lower is better)
Translates to: RYERNSKSLEGIGSS*TSWVGITLRIDMRH
Trigger: ATGTCGCATGTCAATCCGAAGAGTGATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTCTCTCGTATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS-3UTR CAA 90 bp GTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAACATACTCTGAGAGTTTaGTCTCTTGAAGCTGACACC +
Preference number: 5 (lower is better)
Translates to: VDIDQHLCTYSTPCSRMQHTLRV*SLEADT
Trigger: GGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATG...TTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CAA 90 bp CATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTCAAATTGTTACTCCATaGGCATCTCCCTTTGAGATA +
Preference number: 5 (lower is better)
Translates to: HPMVKVAPSPVARDATLSQIVTP*ASPFEI
Trigger: TATCTCAAAGGGAGATGCCAATGGAGTAACAATTTG...AGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579733.5
CDS CCA 90 bp AGATACAGATCGTACCCACCGGTCATTTGCTCCTCCAGCAAATATTaGAGTAGGTGGGGGAAACAGGTGCCCAAATTCCATCAGAATGTC +
Preference number: 5 (lower is better)
Translates to: RYRSYPPVICSSSKY*SRWGKQVPKFHQNV
Trigger: GACATTCTGATGGAATTTGGGCACCTGTTTCCCCCACCTACTCCAATATTTGCTGGAGGAGCAAATGACCGGTGGGTACGATCTGTATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
ENST00000583096.1
CDS-3UTR CAA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCAGAATTGGTAACATTCTaGGTGCCATGCAAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: HVCQASLKLLTSGDLPASELVTF*VPCKRK
Trigger: CTTTCTCTTGCATGGCACCAAGAATGTTACCAATTC...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCATCCTCAAGAAGTAACTaGAGCAGATTTTCTACTGGC +
Preference number: 5 (lower is better)
Translates to: HVCQASLKLLTSGDLPASSSRSN*SRFSTG
Trigger: GCCAGTAGAAAATCTGCTCAAGTTACTTCTTGAGGA...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp GGTTTTCACGAGAAGAGGTGGCAAACAGGTGAACATCTCACAGAATGTAGCTTCTCCAAAAATGCTGTTTaGGGCCAGGTTCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: GFHEKRWQTGEHLTECSFSKNAV*GQVRWL
Trigger: GAGCCACCGAACCTGGCCCAAAACAGCATTTTTGGA...GAAGCTACATTCTGTGAGATGTTCACCTGTTTGCCACCTCTTCTCGTGAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCACCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSPISFS*TLGGKL
Trigger: CAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGG...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348811.6
CDS-3UTR CAA 90 bp CCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCTTAAATTGGTTTCACTaGTCAGACTCCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: PNARLLHPMVKVAPSPVALNWFH*SDSQFH
Trigger: ATGGAATTGGGAGTCTGACAAGTGAAACCAATTTAA...GGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579733.5
CDS-3UTR CAA 90 bp TCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGCATATATACATCCCATATTTaGATACGCCCATTGTTCAAC +
Preference number: 5 (lower is better)
Translates to: SFCPANTIVRLCASGASIYTSHI*IRPLFN
Trigger: GTTGAACAATGGGCGTATCAAAATATGGGATGTATA...TATGCTGGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR CAA 90 bp TTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCACAGCTCCTGAACTTCTaGGGTGGGCATCACTCTTCG +
Preference number: 5 (lower is better)
Translates to: LPASPNSTFVSQYLPSNSQLLNF*GGHHSS
Trigger: CGAAGAGTGATGCCCACCCAAGAAGTTCAGGAGCTG...TGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAACAGCTCCTGAACTTCTaGGGTGGGCATCACTCTTCG +
Preference number: 5 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEQLLNF*GGHHSS
Trigger: CGAAGAGTGATGCCCACCCAAGAAGTTCAGGAGCTG...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTCTGACCTCAGGTGATTaGCCCGCCTCACCCAATTCA +
Preference number: 5 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESLTSGD*PASPNS
Trigger: TGAATTGGGTGAGGCGGGCAAATCACCTGAGGTCAG...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCGCAGTCCAACCTTTTTaGGTCTTGCCGACCCAAGAG +
Preference number: 5 (lower is better)
Translates to: ICLWCTINLTMETERKYSAVQPF*VLPTQE
Trigger: CTCTTGGGTCGGCAAGACCAAAAAAGGTTGGACTGC...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp AGAAAAGCAGAAAGTGGACATCGACCAGCACCTGTGTACGTACAGTACACCTTGTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTA +
Preference number: 5 (lower is better)
Translates to: RKAESGHRPAPVYVQYTLYVQYT*QPNARL
Trigger: TAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA...CAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCTGCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CAA 90 bp CTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTA +
Preference number: 5 (lower is better)
Translates to: LCTYSTPCSRMQGYFILWYVQYT*QPNARL
Trigger: TAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA...CCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427287.6
ENST00000579733.5
CDS-3UTR CAA 90 bp CAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCTTGTTTACAATAGGCTaGGGTCACCAACTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: QYTLQPNARLLHPMVKVALFTIG*GHQLEP
Trigger: AGGCTCAAGTTGGTGACCCAAGCCTATTGTAAACAA...GGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579733.5
CDS GCA 90 bp ACTGCCATCAGTAGAGAAGGCACAGCAAAGACCATTGCTCAAAGGTaGAACTTGCACTGGATAATCCTCATCAATTCTCCAGAACCTCAC +
Preference number: 5 (lower is better)
Translates to: TAISREGTAKTIAQR*NLHWIILINSPEPH
Trigger: GTGAGGTTCTGGAGAATTGATGAGGATTATCCAGTGCAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTGCCTTCTCTACTGATGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS CCA 90 bp CTCACCATTTTATCATCAGCAAGGCTTGCAACATGCAGTCCATCATaGCTAAAAGATACAGATCGTACCCACCGGTCATTTGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LTILSSARLATCSPS*LKDTDRTHRSFAPP
Trigger: TGGAGGAGCAAATGACCGGTGGGTACGATCTGTATCTTTTAGCCATGATGGACTGCATGTTGCAAGCCTTGCTGATGATAAAATGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS CCA 90 bp AAGGCAGAATCTTCTAAATACGATACGAGAGAAACTCCAAAAGCTTaGAAGGAATCGGCAGCTCCTGAACTTCTTGGGTGGGCATCACTC +
Preference number: 5 (lower is better)
Translates to: KAESSKYDTRETPKA*KESAAPELLGWASL
Trigger: GAGTGATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTCTCTCGTATCGTATTTAGAAGATTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS-3UTR CAA 90 bp GGTTTTCACGAGAAGAGGTGGCAAACAGGTGAACATCTCACAGAATGTAGCTTCTCACGACCACATTTCTaGTCAAAAGGAGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: GFHEKRWQTGEHLTECSFSRPHF*SKGAAG
Trigger: TCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGA...GAAGCTACATTCTGTGAGATGTTCACCTGTTTGCCACCTCTTCTCGTGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp CCCAAGAGCAGTGTAAACCAGTTGAATCCAACTGCATCACAGTCACAGCAGGCAATTTTGATACGCCCATaGTTCAACCCTGTAGCAAGA +
Preference number: 5 (lower is better)
Translates to: PKSSVNQLNPTASQSQQAILIRP*FNPVAR
Trigger: TCTTGCTACAGGGTTGAACAATGGGCGTATCAAAAT...TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTGCACAGCAAAGACCATaGCTCAAAGGTGCAACTTGC +
Preference number: 5 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSAQQRP*LKGATC
Trigger: GCAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTGC...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATGCAGTGGTGTGATCTaGGCTTACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAECSGVI*AYCNLH
Trigger: GTGGAGGTTGCAGTAAGCCAAGATCACACCACTGCA...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp CATGTTTGCCAGGCTAGTCTCAAACTGCTGACCTCAGGTGATTTGCCCGCCTCACAAACATGTTTCTACTaGACATATACGCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: HVCQASLKLLTSGDLPASQTCFY*TYTLQS
Trigger: AGATTGCAGCGTATATGTCAAGTAGAAACATGTTTG...TGAGGCGGGCAAATCACCTGAGGTCAGCAGTTTGAGACTAGCCTGGCAAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp GACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCCGTAAGGTTAACAAATaGTTACTCCATTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: DQHLCTYSTPCSRMQGYFRKVNK*LLHWHL
Trigger: GAGATGCCAATGGAGTAACAATTTGTTAACCTTACG...GAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579733.5
CDS GCA 90 bp ATTCTCCAGAACCTCACCATTTTATCATCAGCAAGGCTTGCAACATaGAGTCCATCATGGCTAAAAGATACAGATCGTACCCACCGGTCA +
Preference number: 5 (lower is better)
Translates to: ILQNLTILSSARLAT*SPSWLKDTDRTHRS
Trigger: TGACCGGTGGGTACGATCTGTATCTTTTAGCCATGATGGACTGCATGTTGCAAGCCTTGCTGATGATAAAATGGTGAGGTTCTGGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS-3UTR CAA 90 bp AGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCCTTAAACTGCTTGAATaGGTAACATTCTTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: STCVRTVHLAAECKVTSSLKLLE*VTFLVP
Trigger: TGGCACCAAGAATGTTACCAATTCAAGCAGTTTAAG...GGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS-3UTR CAA 90 bp GGTTTTCACGAGAAGAGGTGGCAAACAGGTGAACATCTCACAGAATGTAGCTTCCATACTCTGAGAGTTTaGTCTCTTGAAGCTGACACC +
Preference number: 5 (lower is better)
Translates to: GFHEKRWQTGEHLTECSFHTLRV*SLEADT
Trigger: GGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATG...GAAGCTACATTCTGTGAGATGTTCACCTGTTTGCCACCTCTTCTCGTGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp GAAGCTGACACCAGGATCAAGCTTCCATCTGGAGCAAAAGTTAAATCTCTGACCCATACTCTGAGAGTTTaGTCTCTTGAAGCTGACACC +
Preference number: 5 (lower is better)
Translates to: EADTRIKLPSGAKVKSLTHTLRV*SLEADT
Trigger: GGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATG...GGTCAGAGATTTAACTTTTGCTCCAGATGGAAGCTTGATCCTGGTGTCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR CAA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTGTACCCACCGGTCATTaGCTCCTCCAGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESVPTGH*LLQQIL
Trigger: CAATATTTGCTGGAGGAGCAAATGACCGGTGGGTAC...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS CCA 90 bp TGGGGGAAACAGGTGCCCAAATTCCATCAGAATGTCTCCATTATGTaGATCCCAGATATATACTCGAGTATCATAAGATGCAGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: WGKQVPKFHQNVSIM*IPDIYSSIIRCSSQ
Trigger: CTGGCTACTGCATCTTATGATACTCGAGTATATATCTGGGATCCACATAATGGAGACATTCTGATGGAATTTGGGCACCTGTTTCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
ENST00000583096.1
CDS-3UTR CAA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCACGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LPYFPLVLQSVITVITFFTISFS*TLGGKL
Trigger: CAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGT...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp CACCCAATTCTGATGCCCCCTCAATACTTTCATCATGTTTCCATCATCTTTCAGTCACGACCACATTTCTaGTCAAAAGGAGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: HPILMPPQYFHHVSIIFQSRPHF*SKGAAG
Trigger: TCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGA...CTGAAAGATGATGGAAACATGATGAAAGTATTGAGGGGGCATCAGAATTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS-3UTR CAA 90 bp GGTGATTTGCCCGCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTCATACTCTGAGAGTTTaGTCTCTTGAAGCTGACACC +
Preference number: 5 (lower is better)
Translates to: GDLPASPNSTFVSQYLPSHTLRV*SLEADT
Trigger: GGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATG...AGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCGCTCAAAGGTGCAACTaGCACTGGATAATCCTCATC +
Preference number: 5 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSAQRCN*HWIILI
Trigger: GATGAGGATTATCCAGTGCAAGTTGCACCTTTGAGC...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS CCA 90 bp AGAGAAGGCACAGCAAAGACCATTGCTCAAAGGTGCAACTTGCACTaGATAATCCTCATCAATTCTCCAGAACCTCACCATTTTATCATC +
Preference number: 5 (lower is better)
Translates to: REGTAKTIAQRCNLH*IILINSPEPHHFII
Trigger: GATGATAAAATGGTGAGGTTCTGGAGAATTGATGAGGATTATCCAGTGCAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTGCCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS CCA 90 bp CTGCTTGAATTGGTAACATTCTTGGTGCCATGCAAGAGACTGGAGTaGGGGAAGTCAGATGGAAATTGTATTATTATTCACTCTGGACTC +
Preference number: 5 (lower is better)
Translates to: LLELVTFLVPCKRLE*GKSDGNCIIIHSGL
Trigger: GAGTCCAGAGTGAATAATAATACAATTTCCATCTGACTTCCCCCACTCCAGTCTCTTGCATGGCACCAAGAATGTTACCAATTCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487603.5
CDS-3UTR CAA 90 bp TCATCAATAAGCATAACCCTCTTAACAGTCACTTTACTTAAGCTGTCTATAGGTACGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SSISITLLTVTLLKLSIGTISFS*TLGGKL
Trigger: CAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGT...ACCTATAGACAGCTTAAGTAAAGTGACTGTTAAGAGGGTTATGCTTATTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CAA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGTCACGACCACATTTCTaGTCAAAAGGAGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWSRPHF*SKGAAG
Trigger: TCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGA...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CAA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTTATCATCAGCAAGGCTaGCAACATGCAGTCCATCAT +
Preference number: 5 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESYHQQG*QHAVHH
Trigger: ATGATGGACTGCATGTTGCAAGCCTTGCTGATGATA...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCTATCATCAGCAAGGCTaGCAACATGCAGTCCATCAT +
Preference number: 5 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSYHQQG*QHAVHH
Trigger: ATGATGGACTGCATGTTGCAAGCCTTGCTGATGATA...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCTTCAAGCTCTACGTCTaGGATGACATTCCTAAGGAT +
Preference number: 5 (lower is better)
Translates to: ICLWCTINLTMETERKYSFKLYV*DDIPKD
Trigger: ATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAA...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCAAAAGCTGTTTTTACTaGACTGGATATGTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: CLWCTINLTMETERKYSTKSCFY*TGYVGV
Trigger: CACACCAACATATCCAGTCAAGTAAAAACAGCTTTT...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp TGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCACCTCTGTTCAGAATTACTaGGGTAAAATGCTATGTCAC +
Preference number: 5 (lower is better)
Translates to: CLWCTINLTMETERKYSTSVQNY*GKMLCH
Trigger: GTGACATAGCATTTTACCCAAGTAATTCTGAACAGA...GGTGGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGCATACTCTGAGAGTTTaGTCTCTTGAAGCTGACACC +
Preference number: 5 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWHTLRV*SLEADT
Trigger: GGTGTCAGCTTCAAGAGACAAAACTCTCAGAGTATG...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CAA 90 bp CTTCCCTATTTTCCTTTGGTCCTTCAGTCTGTTATTACTGTTATTACCTTCTTCGCACAGCAAAGACCATaGCTCAAAGGTGCAACTTGC +
Preference number: 5 (lower is better)
Translates to: LPYFPLVLQSVITVITFFAQQRP*LKGATC
Trigger: GCAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTGC...GAAGAAGGTAATAACAGTAATAACAGACTGAAGGACCAAAGGAAAATAGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp TTGAGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAAGCATCACTCTTCGGATaGACATGCGACATAAATGTT +
Preference number: 5 (lower is better)
Translates to: LRFVLSVFCQSLLLGKAEASLFG*TCDINV
Trigger: AACATTTATGTCGCATGTCAATCCGAAGAGTGATGC...TTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp AGGTTTGTGTTAAGTGTATTCTGTCAGTCCCTACTACTAGGGAAGGCAGAATCTGCATCACTCTTCGGATaGACATGCGACATAAATGTT +
Preference number: 5 (lower is better)
Translates to: RFVLSVFCQSLLLGKAESASLFG*TCDINV
Trigger: AACATTTATGTCGCATGTCAATCCGAAGAGTGATGC...AGATTCTGCCTTCCCTAGTAGTAGGGACTGACAGAATACACTTAACACAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp TGTATTGCTTCTTTGGCAACTCACCAATATCATCCCCTGCAGAAACAGAGTTTTTCGCAAAAGGATAGCTaGGCTGCTGAGTGTGATTTT +
Preference number: 5 (lower is better)
Translates to: CIASLATHQYHPLQKQSFSQKDS*AAECDF
Trigger: AAAATCACACTCAGCAGCCAAGCTATCCTTTTGCGA...AAAACTCTGTTTCTGCAGGGGATGATATTGGTGAGTTGCCAAAGAAGCAATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS TCA 90 bp AAGCTTCCATCTGGAGCAAAAGTTAAATCTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGGAGTTTTCCGATCTCTTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: KLPSGAKVKSLTTSV*STKLRRSFPISFSL
Trigger: CAACGAGAAAGAGATCGGAAAACTCCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAGAGATTTAACTTTTGCTCCAGATGGAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348811.6
ENST00000579733.5
ENST00000584114.1
CDS TCA 90 bp AAGCTTCCATCTGGAGCAAAAGTTAAATCTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGGAGTTTTCAAGTTCTGAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: KLPSGAKVKSLTTSV*STKLRRSFQVLKAL
Trigger: CAGTGCCTTCAGAACTTGAAAACTCCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAGAGATTTAACTTTTGCTCCAGATGGAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS GCA 90 bp CTTGGCAATCTTAAACTGCTTGAATTGGTAACATTCTTGGTGCCATaGAAGAGACTGGAGTGGGGGAAGTCAGATGGAAATTGTATTATT +
Preference number: 5 (lower is better)
Translates to: LGNLKLLELVTFLVP*KRLEWGKSDGNCII
Trigger: AATAATACAATTTCCATCTGACTTCCCCCACTCCAGTCTCTTGCATGGCACCAAGAATGTTACCAATTCAAGCAGTTTAAGATTGCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487603.5
ENST00000583096.1
CDS CCA 90 bp CACAAGCTACCACATCATGGTGATGTCCTTCTAGTTTCCGTATCATaGTGTATTTATCCATATTCCAAAGGAAAACTGCTTTACTGGCTC +
Preference number: 5 (lower is better)
Translates to: HKLPHHGDVLLVSVS*CIYPYSKGKLLYWL
Trigger: GAGCCAGTAAAGCAGTTTTCCTTTGGAATATGGATAAATACACCATGATACGGAAACTAGAAGGACATCACCATGATGTGGTAGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000583096.1
ENST00000584114.1
CDS-3UTR CAA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGGAATTGGTAACATTCTaGGTGCCATGCAAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWELVTF*VPCKRK
Trigger: CTTTCTCTTGCATGGCACCAAGAATGTTACCAATTC...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CAA 90 bp AAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGACCAAATTTTGATACGCCCATaGTTCAACCCTGTAGCAAGA +
Preference number: 5 (lower is better)
Translates to: KCTGPAGTQNFKNSKLDQILIRP*FNPVAR
Trigger: TCTTGCTACAGGGTTGAACAATGGGCGTATCAAAAT...TTGGTCCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CAA 90 bp ATTTGCCTGTGGTGTACCATCAACCTTACAATGGAGACAGAGAGAAAGTACTCCTATACATCCCATATTTaGATACGCCCATTGTTCAAC +
Preference number: 5 (lower is better)
Translates to: ICLWCTINLTMETERKYSYTSHI*IRPLFN
Trigger: GTTGAACAATGGGCGTATCAAAATATGGGATGTATA...GGAGTACTTTCTCTCTGTCTCCATTGTAAGGTTGATGGTACACCACAGGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATAGTACCCACCGGTCATTaGCTCCTCCAGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIVPTGH*LLQQIL
Trigger: CAATATTTGCTGGAGGAGCAAATGACCGGTGGGTAC...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp AACGTCACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCGCTCAAAGGTGCAACTaGCACTGGATAATCCTCATC +
Preference number: 5 (lower is better)
Translates to: NVTFKLYVLDDIPKDNKIAQRCN*HWIILI
Trigger: GATGAGGATTATCCAGTGCAAGTTGCACCTTTGAGC...GATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGTGACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATAAGAAACTCCAAAAGCTaGGAAGGAATCGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NFLALYSKDTYCGSTEAIRNSKS*EGIGSS
Trigger: GGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTCT...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262394.7
ENST00000348811.6
CDS-3UTR CAA 90 bp GCCTCACCCAATTCAACTTTCGTAAGTCAGTATTTACCATCTAACTCAGTGTCCTGCTGTATTGCTTCTTaGGCAACTCACCAATATCAT +
Preference number: 5 (lower is better)
Translates to: ASPNSTFVSQYLPSNSVSCCIAS*ATHQYH
Trigger: ATGATATTGGTGAGTTGCCAAAGAAGCAATACAGCA...GGACACTGAGTTAGATGGTAAATACTGACTTACGAAAGTTGAATTGGGTGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp AGAGCTGGTAAACAACTACAAGAGTTCATCAATAAGCATAACCCTCTTAACAGTTCAATCACACCAATATaGCTGCCACCACCTGTGACA +
Preference number: 5 (lower is better)
Translates to: RAGKQLQEFINKHNPLNSSITPI*LPPPVT
Trigger: TGTCACAGGTGGTGGCAGCAATATTGGTGTGATTGA...ACTGTTAAGAGGGTTATGCTTATTGATGAACTCTTGTAGTTGTTTACCAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS TCA 90 bp CATATTTTGATACGCCCATTGTTCAACCCTGTAGCAAGAAGTAGCTaGTCTTGTCCAAATCTGAAGCGATGCCATTCTATATTTACACAG +
Preference number: 5 (lower is better)
Translates to: HILIRPLFNPVARSS*SCPNLKRCHSIFTQ
Trigger: CTGTGTAAATATAGAATGGCATCGCTTCAGATTTGGACAAGATCAGCTACTTCTTGCTACAGGGTTGAACAATGGGCGTATCAAAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262394.7
ENST00000427287.6
ENST00000467843.6
ENST00000487603.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000583096.1
CDS TCA 90 bp AGTAATGCTCCATCAGGAGAAAAGTCACAAGCTACCACATCATGGTaGTGTCCTTCTAGTTTCCGTATCATGGTGTATTTATCCATATTC +
Preference number: 5 (lower is better)
Translates to: SNAPSGEKSQATTSW*CPSSFRIMVYLSIF
Trigger: GAATATGGATAAATACACCATGATACGGAAACTAGAAGGACATCACCATGATGTGGTAGCTTGTGACTTTTCTCCTGATGGAGCATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
ENST00000583096.1
ENST00000584114.1
CDS-3UTR CAA 90 bp AACGTCACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCAGCAGATATGCTGTATaGCTTCTTTGGCAACTCACC +
Preference number: 5 (lower is better)
Translates to: NVTFKLYVLDDIPKDNKISRYAV*LLWQLT
Trigger: GGTGAGTTGCCAAAGAAGCAATACAGCATATCTGCT...GATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGTGACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp CAGTTAAATGTACAGGACCAGCTGGGACTCAAAACTTTAAAAACAGCAAACTGGGAATGTACAAGAACTTaGACACGTACTGCTTTACTG +
Preference number: 5 (lower is better)
Translates to: QLNVQDQLGLKTLKTANWECTRT*TRTALL
Trigger: CAGTAAAGCAGTACGTGTCAAAGTTCTTGTACATTC...CCAGTTTGCTGTTTTTAAAGTTTTGAGTCCCAGCTGGTCCTGTACATTTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS TCA 90 bp AAGCTTCCATCTGGAGCAAAAGTTAAATCTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGGAGTTTTCCTGTATATACATCCCAT +
Preference number: 5 (lower is better)
Translates to: KLPSGAKVKSLTTSV*STKLRRSFPVYTSH
Trigger: ATGGGATGTATATACAGGAAAACTCCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAGAGATTTAACTTTTGCTCCAGATGGAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262394.7
ENST00000427287.6
ENST00000467843.6
ENST00000487603.5
ENST00000581185.5
ENST00000581440.5
ENST00000583096.1
CDS CCA 90 bp CACAAGCTACCACATCATGGTGATGTCCTTCTAGTTTCCGTATCATaGTGTATTTATCCATATTCCAAAGGAAAACCTGCAATAAAAAGG +
Preference number: 5 (lower is better)
Translates to: HKLPHHGDVLLVSVS*CIYPYSKGKPAIKR
Trigger: CCTTTTTATTGCAGGTTTTCCTTTGGAATATGGATAAATACACCATGATACGGAAACTAGAAGGACATCACCATGATGTGGTAGCTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467843.6
CDS-3UTR CAA 90 bp AATTTCCTTGCACTTTACAGCAAAGATACATATTGTGGCTCTACTGAAGCAATACTACTGGCTTTCAAATaGATAACCCTACACCCCCTA +
Preference number: 5 (lower is better)
Translates to: NFLALYSKDTYCGSTEAILLAFK*ITLHPL
Trigger: TAGGGGGTGTAGGGTTATCAATTTGAAAGCCAGTAG...TATTGCTTCAGTAGAGCCACAATATGTATCTTTGCTGTAAAGTGCAAGGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp AACGTCACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCCTTAAACTGCTTGAATaGGTAACATTCTTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: NVTFKLYVLDDIPKDNKILKLLE*VTFLVP
Trigger: TGGCACCAAGAATGTTACCAATTCAAGCAGTTTAAG...GATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGTGACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp TCAACTAGCCTCCCACCCTCCATTAATTCAAAGTGTATTGTAATTATCACATGTCTTAAACTGCTTGAATaGGTAACATTCTTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: STSLPPSINSKCIVIITCLKLLE*VTFLVP
Trigger: TGGCACCAAGAATGTTACCAATTCAAGCAGTTTAAG...ACATGTGATAATTACAATACACTTTGAATTAATGGAGGGTGGGAGGCTAGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS-3UTR CAA 90 bp ACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCCTTTTCTCCTTTTTGCTTAATTaGCCTGTGGTGTACCATCAA +
Preference number: 5 (lower is better)
Translates to: TFKLYVLDDIPKDNKILFSFLLN*PVVYHQ
Trigger: TTGATGGTACACCACAGGCAAATTAAGCAAAAAGGA...GAAAAGGATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp ACATTCAAGCTCTACGTCTTGGATGACATTCCTAAGGATAATAAAATCCTTTTCTCTTCATTGTCCTTTTaGCTTAATTTGCCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: TFKLYVLDDIPKDNKILFSSLSF*LNLPVV
Trigger: CACCACAGGCAAATTAAGCAAAAAGGACAATGAAGA...GAAAAGGATTTTATTATCCTTAGGAATGTCATCCAAGACGTAGAGCTTGAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262394.7
CDS-3UTR CAA 90 bp TCATCAATAAGCATAACCCTCTTAACAGTCACTTTACTTAAGCTGTCTATAGGTTATACATCCCATATTTaGATACGCCCATTGTTCAAC +
Preference number: 5 (lower is better)
Translates to: SSISITLLTVTLLKLSIGYTSHI*IRPLFN
Trigger: GTTGAACAATGGGCGTATCAAAATATGGGATGTATA...ACCTATAGACAGCTTAAGTAAAGTGACTGTTAAGAGGGTTATGCTTATTGATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS CAA 90 bp ACAACAGAGAAGAGAGTGGCGACCGCTGAGGGGCGTGACGCCAAGTaGGTCCCTCCCGGGCCCAGGGACAGAGGAGACGGGCGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: TTEKRVATAEGRDAK*VPPGPRDRGDGRGR
Trigger: CCGCCCCCGCCCGTCTCCTCTGTCCCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS CAA 72 bp AAGAGAGTGGCGACCGCTGAGGGGCGTGACGCCAAGTaGGTCCCTCCCGGGCCCAGGGACAGAGGAGACGGG +
Preference number: 6 (lower is better)
Translates to: KRVATAEGRDAK*VPPGPRDRGDG
Trigger: CCCGTCTCCTCTGTCCCTGGGCCCGGGAGGGACCAACTTGGCGTCACGCCCCTCAGCGGTCGCCACTCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS GCA 72 bp AGACGGGCGGGGGCGGCCGCTGCGGCTTCTGCTAACTaGCTCGGGAAAGCTCCCGAAGGCCTCAGACCAAAG +
Preference number: 6 (lower is better)
Translates to: RRAGAAAAASAN*LGKAPEGLRPK
Trigger: CTTTGGTCTGAGGCCTTCGGGAGCTTTCCCGAGGCAGTTAGCAGAAGCCGCAGCGGCCGCCCCCGCCCGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS CCA 72 bp GGGAATACGATGCGGACCCAACAACAGAGAAGAGAGTaGCGACCGCTGAGGGGCGTGACGCCAAGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: GNTMRTQQQRRE*RPLRGVTPSWS
Trigger: GGACCAACTTGGCGTCACGCCCCTCAGCGGTCGCCACTCTCTTCTCTGTTGTTGGGTCCGCATCGTATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS CAA 90 bp CTCCAGCCTGGACGACGGAGCGAGACTCAGTCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTGGCCATCTATGGGGCACCGTCTGAT +
Preference number: 6 (lower is better)
Translates to: LQPGRRSETQSISFS*TLGGKLAIYGAPSD
Trigger: ATCAGACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGACTGAGTCTCGCTCCGTCGTCCAGGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578312.5
CDS TCA 72 bp CCTCGGGGGAAAGCTGGCCATCTATGGGGCACCGTCTaGTTCCGGGAATACGATGCGGACCCAACAACAGAG +
Preference number: 6 (lower is better)
Translates to: PRGKAGHLWGTV*FREYDADPTTE
Trigger: CTCTGTTGTTGGGTCCGCATCGTATTCCCGGAATCAGACGGTGCCCCATAGATGGCCAGCTTTCCCCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS TCA 72 bp GACGACGGAGCGAGACTCAGTCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGGCCATCTATGGGGCAC +
Preference number: 6 (lower is better)
Translates to: DDGARLSRSLSR*PSGESWPSMGH
Trigger: GTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGACTGAGTCTCGCTCCGTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578312.5
CDS CAA 72 bp GGACGACGGAGCGAGACTCAGTCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTGGCCATCTATGGGGCA +
Preference number: 6 (lower is better)
Translates to: GRRSETQSISFS*TLGGKLAIYGA
Trigger: TGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGACTGAGTCTCGCTCCGTCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578312.5
CDS GCA 72 bp CCATCTATGGGGCACCGTCTGATTCCGGGAATACGATaGGGACCCAACAACAGAGAAGAGAGTGGCGACCGC +
Preference number: 6 (lower is better)
Translates to: PSMGHRLIPGIR*GPNNREESGDR
Trigger: GCGGTCGCCACTCTCTTCTCTGTTGTTGGGTCCGCATCGTATTCCCGGAATCAGACGGTGCCCCATAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000427287.6
ENST00000467843.6
ENST00000578312.5
ENST00000579733.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000582208.1
ENST00000583193.5
ENST00000583742.1
ENST00000583786.5
ENST00000584354.1
CDS CCA 72 bp ACAGTTCCCCTAAAGCGCCGACTGCAAACGAGACACTaGAGTCAAAATGGCGGGCGGCGCCGGAGATATCTG +
Preference number: 6 (lower is better)
Translates to: TVPLKRRLQTRH*SQNGGRRRRYL
Trigger: CAGATATCTCCGGCGCCGCCCGCCATTTTGACTCCAGTGTCTCGTTTGCAGTCGGCGCTTTAGGGGAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581440.5
CDS TCA 72 bp TTCTTGGTGCCATGCAAGAGACGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGGCCATCTATGGGGCAC +
Preference number: 6 (lower is better)
Translates to: FLVPCKRRSLSR*PSGESWPSMGH
Trigger: GTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGTCTCTTGCATGGCACCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581089.1
CDS CAA 72 bp ATTCTTGGTGCCATGCAAGAGACGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTGGCCATCTATGGGGCA +
Preference number: 6 (lower is better)
Translates to: ILGAMQETISFS*TLGGKLAIYGA
Trigger: TGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGTCTCTTGCATGGCACCAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581089.1
CDS TCA 72 bp ACCAAGCAAAGTATGAACCATCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGGCCATCTATGGGGCAC +
Preference number: 6 (lower is better)
Translates to: TKQSMNHRSLSR*PSGESWPSMGH
Trigger: GTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGATGGTTCATACTTTGCTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS GCA 72 bp GGCATCACTCTTCGGATTGACATGCGACATAAATGTTaGAGGCTAGGGACCTGCCGTGGAGTGGCCCAAAAA +
Preference number: 6 (lower is better)
Translates to: GITLRIDMRHKC*RLGTCRGVAQK
Trigger: TTTTTGGGCCACTCCACGGCAGGTCCCTAGCCTGCAACATTTATGTCGCATGTCAATCCGAAGAGTGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS CAA 72 bp GACCAAGCAAAGTATGAACCATCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTGGCCATCTATGGGGCA +
Preference number: 6 (lower is better)
Translates to: DQAKYEPSISFS*TLGGKLAIYGA
Trigger: TGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGATGGTTCATACTTTGCTTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427287.6
CDS TCA 72 bp AGTTCACCTATAGTACGTAATCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGGCCATCTATGGGGCAC +
Preference number: 6 (lower is better)
Translates to: SSPIVRNRSLSR*PSGESWPSMGH
Trigger: GTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGATTACGTACTATAGGTGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583786.5
CDS CAA 72 bp TCACCTATAGTACGTAATCTCACGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTGGCCATCTATGGGGCA +
Preference number: 6 (lower is better)
Translates to: SPIVRNLTISFS*TLGGKLAIYGA
Trigger: TGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGTGAGATTACGTACTATAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262394.7
ENST00000467843.6
ENST00000581185.5
ENST00000582208.1
ENST00000584354.1
CDS TCA 72 bp AGAAACTCCAAAAGCTTGGAAGGAATCGGCAGCTCCTaGACTTCTTGGGTGGGCATCACTCTTCGGATTGAC +
Preference number: 6 (lower is better)
Translates to: RNSKSLEGIGSS*TSWVGITLRID
Trigger: GTCAATCCGAAGAGTGATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS TCA 72 bp TCAATACTTTCATCATGTTTCCGATCTCTTTCTCGTTaGCCCTCGGGGGAAAGCTGGCCATCTATGGGGCAC +
Preference number: 6 (lower is better)
Translates to: SILSSCFRSLSR*PSGESWPSMGH
Trigger: GTGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGGAAACATGATGAAAGTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583193.5
CDS GCA 72 bp ATTGACATGCGACATAAATGTTGCAGGCTAGGGACCTaGCGTGGAGTGGCCCAAAAATACACACTTCCGTCA +
Preference number: 6 (lower is better)
Translates to: IDMRHKCCRLGT*RGVAQKYTLPS
Trigger: TGACGGAAGTGTGTATTTTTGGGCCACTCCACGGCAGGTCCCTAGCCTGCAACATTTATGTCGCATGTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS CCA 72 bp CCGGTCATTTGCTCCTCCAGCAAATATTGGAGTAGGTaGGGGAAACAGGTGCCCAAATTCCATCAGAATGTC +
Preference number: 6 (lower is better)
Translates to: PVICSSSKYWSR*GKQVPKFHQNV
Trigger: GACATTCTGATGGAATTTGGGCACCTGTTTCCCCCACCTACTCCAATATTTGCTGGAGGAGCAAATGACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
ENST00000583096.1
CDS CCA 72 bp GCTTGGAAGGAATCGGCAGCTCCTGAACTTCTTGGGTaGGCATCACTCTTCGGATTGACATGCGACATAAAT +
Preference number: 6 (lower is better)
Translates to: AWKESAAPELLG*ASLFGLTCDIN
Trigger: ATTTATGTCGCATGTCAATCCGAAGAGTGATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCCTTCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS CAA 72 bp CTCAATACTTTCATCATGTTTCCGATCTCTTTCTCGTaGACCCTCGGGGGAAAGCTGGCCATCTATGGGGCA +
Preference number: 6 (lower is better)
Translates to: LNTFIMFPISFS*TLGGKLAIYGA
Trigger: TGCCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGGAAACATGATGAAAGTATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583193.5
CDS GCA 72 bp ATGGCTAAAAGATACAGATCGTACCCACCGGTCATTTaGTCCTCCAGCAAATATTGGAGTAGGTGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: MAKRYRSYPPVI*SSSKYWSRWGK
Trigger: TTTCCCCCACCTACTCCAATATTTGCTGGAGGAGCAAATGACCGGTGGGTACGATCTGTATCTTTTAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
ENST00000583096.1
CDS TCA 72 bp AAGAACTTTGACACGTACTGCTTTACTGGCTCCGACTaGACACAGCATAGAAGAGTCAGGAGAGAATGCACA +
Preference number: 6 (lower is better)
Translates to: KNFDTYCFTGSD*TQHRRVRRECT
Trigger: TGTGCATTCTCTCCTGACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTACGTGTCAAAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS CCA 72 bp TCTTCTAAATACGATACGAGAGAAACTCCAAAAGCTTaGAAGGAATCGGCAGCTCCTGAACTTCTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: SSKYDTRETPKA*KESAAPELLGW
Trigger: CCACCCAAGAAGTTCAGGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTCTCTCGTATCGTATTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS TCA 72 bp CATATTCCAAAGGAAAACTGCTTTACTGGCTCCGACTaGACACAGCATAGAAGAGTCAGGAGAGAATGCACA +
Preference number: 6 (lower is better)
Translates to: HIPKENCFTGSD*TQHRRVRRECT
Trigger: TGTGCATTCTCTCCTGACTCTTCTATGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTTTTCCTTTGGAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000583096.1
ENST00000584114.1
CDS GCA 72 bp CTTAAACTGCTTGAATTGGTAACATTCTTGGTGCCATaGAAGAGACTGGAGTGGGGGAAGTCAGATGGAAAT +
Preference number: 6 (lower is better)
Translates to: LKLLELVTFLVP*KRLEWGKSDGN
Trigger: ATTTCCATCTGACTTCCCCCACTCCAGTCTCTTGCATGGCACCAAGAATGTTACCAATTCAAGCAGTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487603.5
ENST00000583096.1
CDS CCA 72 bp TTATCATCAGCAAGGCTTGCAACATGCAGTCCATCATaGCTAAAAGATACAGATCGTACCCACCGGTCATTT +
Preference number: 6 (lower is better)
Translates to: LSSARLATCSPS*LKDTDRTHRSF
Trigger: AAATGACCGGTGGGTACGATCTGTATCTTTTAGCCATGATGGACTGCATGTTGCAAGCCTTGCTGATGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS TCA 72 bp ATACGCCCATTGTTCAACCCTGTAGCAAGAAGTAGCTaGTCTTGTCCAAATCTGAAGCGATGCCATTCTATA +
Preference number: 6 (lower is better)
Translates to: IRPLFNPVARSS*SCPNLKRCHSI
Trigger: TATAGAATGGCATCGCTTCAGATTTGGACAAGATCAGCTACTTCTTGCTACAGGGTTGAACAATGGGCGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262394.7
ENST00000427287.6
ENST00000467843.6
ENST00000487603.5
ENST00000581089.1
ENST00000581185.5
ENST00000581440.5
ENST00000583096.1
CDS GCA 72 bp AACCTCACCATTTTATCATCAGCAAGGCTTGCAACATaGAGTCCATCATGGCTAAAAGATACAGATCGTACC +
Preference number: 6 (lower is better)
Translates to: NLTILSSARLAT*SPSWLKDTDRT
Trigger: GGTACGATCTGTATCTTTTAGCCATGATGGACTGCATGTTGCAAGCCTTGCTGATGATAAAATGGTGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS GCA 72 bp TCTCCAGAACCTCACCATTTTATCATCAGCAAGGCTTaGAACATGCAGTCCATCATGGCTAAAAGATACAGA +
Preference number: 6 (lower is better)
Translates to: SPEPHHFIISKA*NMQSIMAKRYR
Trigger: TCTGTATCTTTTAGCCATGATGGACTGCATGTTGCAAGCCTTGCTGATGATAAAATGGTGAGGTTCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
CDS CAA 72 bp ATGCAAGAGACTGGAGTGGGGGAAGTCAGATGGAAATaGTATTATTATTCACTCTGGACTCCTCTGGACATT +
Preference number: 6 (lower is better)
Translates to: MQETGVGEVRWK*YYYSLWTPLDI
Trigger: AATGTCCAGAGGAGTCCAGAGTGAATAATAATACAATTTCCATCTGACTTCCCCCACTCCAGTCTCTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487603.5
CDS TCA 72 bp CCATCAGGAGAAAAGTCACAAGCTACCACATCATGGTaGTGTCCTTCTAGTTTCCGTATCATGGTGTATTTA +
Preference number: 6 (lower is better)
Translates to: PSGEKSQATTSW*CPSSFRIMVYL
Trigger: TAAATACACCATGATACGGAAACTAGAAGGACATCACCATGATGTGGTAGCTTGTGACTTTTCTCCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000467843.6
ENST00000583096.1
ENST00000584114.1
CDS CCA 72 bp TTGGTAACATTCTTGGTGCCATGCAAGAGACTGGAGTaGGGGAAGTCAGATGGAAATTGTATTATTATTCAC +
Preference number: 6 (lower is better)
Translates to: LVTFLVPCKRLE*GKSDGNCIIIH
Trigger: GTGAATAATAATACAATTTCCATCTGACTTCCCCCACTCCAGTCTCTTGCATGGCACCAAGAATGTTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487603.5
ENST00000583096.1
CDS TCA 72 bp TCTGGAGCAAAAGTTAAATCTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGGAGTTTTCCGATCTCT +
Preference number: 6 (lower is better)
Translates to: SGAKVKSLTTSV*STKLRRSFPIS
Trigger: AGAGATCGGAAAACTCCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAGAGATTTAACTTTTGCTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348811.6
ENST00000579733.5
ENST00000584114.1
CDS CCA 72 bp CCACATCATGGTGATGTCCTTCTAGTTTCCGTATCATaGTGTATTTATCCATATTCCAAAGGAAAACCTGCA +
Preference number: 6 (lower is better)
Translates to: PHHGDVLLVSVS*CIYPYSKGKPA
Trigger: TGCAGGTTTTCCTTTGGAATATGGATAAATACACCATGATACGGAAACTAGAAGGACATCACCATGATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467843.6
CDS TCA 72 bp TCTGGAGCAAAAGTTAAATCTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGGAGTTTTCAAGTTCTG +
Preference number: 6 (lower is better)
Translates to: SGAKVKSLTTSV*STKLRRSFQVL
Trigger: CAGAACTTGAAAACTCCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAGAGATTTAACTTTTGCTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582208.1
CDS CCA 72 bp CCACATCATGGTGATGTCCTTCTAGTTTCCGTATCATaGTGTATTTATCCATATTCCAAAGGAAAACTGCTT +
Preference number: 6 (lower is better)
Translates to: PHHGDVLLVSVS*CIYPYSKGKLL
Trigger: AAGCAGTTTTCCTTTGGAATATGGATAAATACACCATGATACGGAAACTAGAAGGACATCACCATGATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262394.7
ENST00000348811.6
ENST00000583096.1
ENST00000584114.1
CDS CAA 90 bp TGCACACATTATCATAATCCAATTCATAATGAATGTACAAGAACTTaGACACGTACTGCTTTACTGGCTCCGACTGAACACAGCATAGAA +
Preference number: 6 (lower is better)
Translates to: CTHYHNPIHNECTRT*TRTALLAPTEHSIE
Trigger: TTCTATGCTGTGTTCAGTCGGAGCCAGTAAAGCAGTACGTGTCAAAGTTCTTGTACATTCATTATGAATTGGATTATGATAATGTGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS TCA 72 bp TCTGGAGCAAAAGTTAAATCTCTGACCACTTCAGTATaGTCTACCAAGTTAAGGAGGAGTTTTCCTGTATAT +
Preference number: 6 (lower is better)
Translates to: SGAKVKSLTTSV*STKLRRSFPVY
Trigger: ATATACAGGAAAACTCCTCCTTAACTTGGTAGATCATACTGAAGTGGTCAGAGATTTAACTTTTGCTCCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262394.7
ENST00000427287.6
ENST00000467843.6
ENST00000487603.5
ENST00000581185.5
ENST00000581440.5
ENST00000583096.1
CDS TCA 72 bp ATCATAATCCAATTCATAATGAATGTACAAGAACTTTaGCACGTACTGCTTTACTGGCTCCGACTGAACACA +
Preference number: 6 (lower is better)
Translates to: IIIQFIMNVQEL*HVLLYWLRLNT
Trigger: TGTGTTCAGTCGGAGCCAGTAAAGCAGTACGTGTCAAAGTTCTTGTACATTCATTATGAATTGGATTATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5
CDS CAA 72 bp TATCATAATCCAATTCATAATGAATGTACAAGAACTTaGACACGTACTGCTTTACTGGCTCCGACTGAACAC +
Preference number: 6 (lower is better)
Translates to: YHNPIHNECTRT*TRTALLAPTEH
Trigger: GTGTTCAGTCGGAGCCAGTAAAGCAGTACGTGTCAAAGTTCTTGTACATTCATTATGAATTGGATTATGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581185.5