RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WRN (Homo sapiens)

Ensembl gene IDs: ENSG00000165392

Ensembl transcript IDs: ENST00000298139.7, ENST00000520169.1, ENST00000521620.5, ENST00000650667.1

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCTGCTCGCTCCAAATCAAGGGGGCAGCCAGCTTTCACCGCTTaGGATAAGTGCATGCCAATTGTCATGAGAGGCAGAATCCTGCTC +
Preference number: 1 (lower is better)
Translates to: RPARSKSRGQPAFTA*DKCMPIVMRGRILL
Trigger: GAGCAGGATTCTGCCTCTCATGACAATTGGCATGCACTTATCCCAAGCGGTGAAAGCTGGCTGCCCCCTTGATTTGGAGCGAGCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 90 bp GACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCTGTGCGTACTTaGCACTCCATCACACAGGATATTCACAGGGTATTGCAGATGCAC +
Preference number: 1 (lower is better)
Translates to: DSLVPRHAADVSVRT*HSITQDIHRVLQMH
Trigger: GTGCATCTGCAATACCCTGTGAATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCTAGGTACGAGGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR GCA 90 bp CGCTCCAAATCAAGGGGGCAGCCAGCTTTCACCGCTTGGGATAAGTaGATGCCAATTGTCATGAGAGGCAGAATCCTGCTCTCAGCTATG +
Preference number: 1 (lower is better)
Translates to: RSKSRGQPAFTAWDK*MPIVMRGRILLSAM
Trigger: CATAGCTGAGAGCAGGATTCTGCCTCTCATGACAATTGGCATGCACTTATCCCAAGCGGTGAAAGCTGGCTGCCCCCTTGATTTGGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 90 bp TCGGATAACATCAGCAATAATCTTCTGAACCTCTGGAGTCAGGCCTaGTCGCTCCAAATCAAGGGGGCAGCCAGCTTTCACCGCTTGGGA +
Preference number: 1 (lower is better)
Translates to: SDNISNNLLNLWSQA*SLQIKGAASFHRLG
Trigger: TCCCAAGCGGTGAAAGCTGGCTGCCCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGATTATTGCTGATGTTATCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 90 bp GACGGGAGGGTTTCGGATAACATCAGCAATAATCTTCTGAACCTCTaGAGTCAGGCCTGCTCGCTCCAAATCAAGGGGGCAGCCAGCTTT +
Preference number: 1 (lower is better)
Translates to: DGRVSDNISNNLLNL*SQACSLQIKGAASF
Trigger: AAAGCTGGCTGCCCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGATTATTGCTGATGTTATCCGAAACCCTCCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp TCTGAGTTGACGGGAGGGTTTCGGATAACATCAGCAATAATCTTCTaGACCTCTGGAGTCAGGCCTGCTCGCTCCAAATCAAGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: SELTGGFRITSAIIF*TSGVRPARSKSRGQ
Trigger: CTGCCCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGATTATTGCTGATGTTATCCGAAACCCTCCCGTCAACTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp GGCAGCCAGCTTTCACCGCTTGGGATAAGTGCATGCCAATTGTCATaGGAGGCAGAATCCTGCTCTCAGCTATGCTCTTCAAAGGCATCT +
Preference number: 1 (lower is better)
Translates to: GSQLSPLGISACQLS*EAESCSQLCSSKAS
Trigger: AGATGCCTTTGAAGAGCATAGCTGAGAGCAGGATTCTGCCTCTCATGACAATTGGCATGCACTTATCCCAAGCGGTGAAAGCTGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 90 bp GACGGGAAAAAGCCTTCCACCAACTCTCTGTTTGATCCTTGCCAGTaGCAAATAAACTGTGCCTGCGATATTGATCGGCAAGACGCTGAG +
Preference number: 1 (lower is better)
Translates to: DGKKPSTNSLFDPCQ*QINCACDIDRQDAE
Trigger: CTCAGCGTCTTGCCGATCAATATCGCAGGCACAGTTTATTTGGCACTGGCAAGGATCAAACAGAGAGTTGGTGGAAGGCTTTTTCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 90 bp TCAGCTGACGGGAAAAAGCCTTCCACCAACTCTCTGTTTGATCCTTaGCAGTGCCAAATAAACTGTGCCTGCGATATTGATCGGCAAGAC +
Preference number: 1 (lower is better)
Translates to: SADGKKPSTNSLFDP*QCQINCACDIDRQD
Trigger: GTCTTGCCGATCAATATCGCAGGCACAGTTTATTTGGCACTGGCAAGGATCAAACAGAGAGTTGGTGGAAGGCTTTTTCCCGTCAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp TTCCTGAATGAATCCCTAAAATCATGCCCCCACTCAGAAATACAGTaGGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCCTCA +
Preference number: 1 (lower is better)
Translates to: FLNESLKSCPHSEIQ*ASSTAMSVIPISAS
Trigger: TGAGGCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAGTGGGGGCATGATTTTAGGGATTCATTCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp CAAAAGCTTAAATGCTTGTGGACCAAAGTCCCAGGATGTATCCTCTaGGTCATCCATGGAATAGCAATGATCCAATCTGGACCTGCAATT +
Preference number: 1 (lower is better)
Translates to: QKLKCLWTKVPGCIL*VIHGIAMIQSGPAI
Trigger: AATTGCAGGTCCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACTTTGGTCCACAAGCATTTAAGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp GATCTCTTCAGAACCGGGAAAACATCTCCTTTTGTTGACATCACATaGAGGTTGAAGTCCGCTGTCAGGACCATGTTTAAGGATCTCAAT +
Preference number: 1 (lower is better)
Translates to: DLFRTGKTSPFVDIT*RLKSAVRTMFKDLN
Trigger: ATTGAGATCCTTAAACATGGTCCTGACAGCGGACTTCAACCTTCATGTGATGTCAACAAAAGGAGATGTTTTCCCGGTTCTGAAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 90 bp AATAAGGGGAGAGATAACAAGGCCAATCTTGCCTACATAAACAGGTaGATACTGGAAGCACAAACTCTTTCCATATCCAGTTGCCATGAC +
Preference number: 1 (lower is better)
Translates to: NKGRDNKANLAYINR*ILEAQTLSISSCHD
Trigger: GTCATGGCAACTGGATATGGAAAGAGTTTGTGCTTCCAGTATCCACCTGTTTATGTAGGCAAGATTGGCCTTGTTATCTCTCCCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 90 bp CCCTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTaGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAG +
Preference number: 1 (lower is better)
Translates to: PFSFCPLISCWYHFL*QTTQVIVSFSLQMK
Trigger: CTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp AGTCTCAGTATTGATGCCTACTTCTTCCTTGCTTCTCTTAGAACTTaGACAGATCTCTTCAGAACCGGGAAAACATCTCCTTTTGTTGAC +
Preference number: 1 (lower is better)
Translates to: SLSIDAYFFLASLRT*TDLFRTGKTSPFVD
Trigger: GTCAACAAAAGGAGATGTTTTCCCGGTTCTGAAGAGATCTGTTCAAGTTCTAAGAGAAGCAAGGAAGAAGTAGGCATCAATACTGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp ACTTCTAAATACAGGTTTGGTCGATCAAAACCAGTACAGGTGATCTaGGGATTTCTCAGATTTAAGCAACGTACAATGTCTTCCCGGATT +
Preference number: 1 (lower is better)
Translates to: TSKYRFGRSKPVQVI*GFLRFKQRTMSSRI
Trigger: AATCCGGGAAGACATTGTACGTTGCTTAAATCTGAGAAATCCTCAGATCACCTGTACTGGTTTTGATCGACCAAACCTGTATTTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 90 bp AATTCCCAGTGGGAACTTGTTTTGACAAGAAATGGCTGCAGATCCTaGAGGATATTCCCTGTTTTTCGCCTAACTTCTAAATACAGGTTT +
Preference number: 1 (lower is better)
Translates to: NSQWELVLTRNGCRS*RIFPVFRLTSKYRF
Trigger: AAACCTGTATTTAGAAGTTAGGCGAAAAACAGGGAATATCCTTCAGGATCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACTGGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 90 bp TGTAACTTGTTGTGTCATTTTTCTAGAAGGACAGTAGATGATTGTTaGACCTTCAAATTCCCAGTGGGAACTTGTTTTGACAAGAAATGG +
Preference number: 1 (lower is better)
Translates to: CNLLCHFSRRTVDDC*TFKFPVGTCFDKKW
Trigger: CCATTTCTTGTCAAAACAAGTTCCCACTGGGAATTTGAAGGTCCAACAATCATCTACTGTCCTTCTAGAAAAATGACACAACAAGTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTACAAAAGCATGCAAATaGAGAAGCCATGGCTGGACA +
Preference number: 2 (lower is better)
Translates to: RHAADVSVRTCHSITQDITKACK*RSHGWT
Trigger: TGTCCAGCCATGGCTTCTGCATTTGCATGCTTTTGT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR CCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTTGCAGAAGCCATGGCTaGACAACAACATATCACATA +
Preference number: 2 (lower is better)
Translates to: KQVLLLETASYLGMQQTCCRSHG*TTTYHI
Trigger: TATGTGATATGTTGTTGTCCAGCCATGGCTTCTGCA...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR GCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGTTGAGGCAAGTAACTTaGTCTTCATTGGGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWLRQVT*SSLGAG
Trigger: GCCAGCACCCAATGAAGAGCAAGTTACTTGCCTCAA...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGCCAACATGGCAGCTTTaGCTTCAGAAACACCATCAA +
Preference number: 2 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVPTWQL*LQKHHQ
Trigger: TTGATGGTGTTTCTGAAGGCAAAGCTGCCATGTTGG...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACCTCTGGAGTCAGGCCTaGTCGCTCCAAATCAAGGGG +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHLWSQA*SLQIKG
Trigger: CCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAG...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGATAAGCATCAGTGGCTaGATACAGTTTCTGGTCCTC +
Preference number: 2 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWISISG*IQFLVL
Trigger: GAGGACCAGAAACTGTATGCAGCCACTGATGCTTAT...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGCAGCATAAGCATCAGTaGCTGCATACAGTTTCTGGT +
Preference number: 2 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWQHKHQ*LHTVSG
Trigger: ACCAGAAACTGTATGCAGCCACTGATGCTTATGCTG...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGAAACTCATGCCCGCATaGTATGTTCCACAGGATAGA +
Preference number: 2 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWKLMPA*YVPQDR
Trigger: TCTATCCTGTGGAACATACCATGCGGGCATGAGTTT...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 90 bp GCTGCATACAGTTTCTGGTCCTCAGTGAGAGGAAATTTACTCCAATaGCTACAGCGGATAGACTTGTCTTTCAGGAGCTGTTTACCTAAG +
Preference number: 2 (lower is better)
Translates to: AAYSFWSSVRGNLLQ*LQRIDLSFRSCLPK
Trigger: CTTAGGTAAACAGCTCCTGAAAGACAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCCTCTCACTGAGGACCAGAAACTGTATGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTAAATGTCTTCCCGGATTaGAGAACTTGCAGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: LANHTGNRLFLSADEVSVNVFPD*RTCSSS
Trigger: ACTGCTACTGCAAGTTCTTCAATCCGGGAAGACATT...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGGAATCCCTAAAATCATaGCCCCACTCAGAAATACAG +
Preference number: 2 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWESLKS*PHSEIQ
Trigger: CTGTATTTCTGAGTGGGGGCATGATTTTAGGGATTC...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGACTCTTCATTGGGTGCTaGCCACAAAAAGTCCTTATC +
Preference number: 2 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGLFIGC*PQKVLI
Trigger: GATAAGGACTTTTTGTGGCCAGCACCCAATGAAGAG...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGGCCTACATAAACAGGTaGATACTGGAAGCACAAACT +
Preference number: 2 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWAYINR*ILEAQT
Trigger: AGTTTGTGCTTCCAGTATCCACCTGTTTATGTAGGC...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGTGTTTTGACAAGAAATaGCTGCAGATCCTGAAGGAT +
Preference number: 2 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVCFDKK*LQILKD
Trigger: ATCCTTCAGGATCTGCAGCCATTTCTTGTCAAAACA...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGAGCAATGATCCAATCTaGACCTGCAATTATCACAGC +
Preference number: 2 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWSNDPI*TCNYHS
Trigger: GCTGTGATAATTGCAGGTCCAGATTGGATCATTGCT...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 90 bp TCCTCAGTGAGAGGAAATTTACTCCAATTGCTACAGCGGATAGACTaGTCTTTCAGGAGCTGTTTACCTAAGAGGTGTTTAACCAGACTG +
Preference number: 2 (lower is better)
Translates to: SSVRGNLLQLLQRID*SFRSCLPKRCLTRL
Trigger: CAGTCTGGTTAAACACCTCTTAGGTAAACAGCTCCTGAAAGACAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCCTCTCACTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGGCCCAACTTCCTGAATaGATCCCTAAAATCATGCCC +
Preference number: 2 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKAQLPE*IPKIMP
Trigger: GGGCATGATTTTAGGGATTCATTCAGGAAGTTGGGC...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGTACAAAATATACACTTaGCTAGTGCAATTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVYKIYT*LVQLVS
Trigger: GGAGACCAATTGCACTAGGCAAGTGTATATTTTGTA...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGAGTTTAAATTATTGCTaGGCCTCAGTTCAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVSLNYC*ASVQSQ
Trigger: TTGAGACTGAACTGAGGCCCAGCAATAATTTAAACT...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGCCTTCAAATTCCCAGTaGGAACTTGTTTTGACAAGA +
Preference number: 2 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWPSNSQ*ELVLTR
Trigger: TCTTGTCAAAACAAGTTCCCACTGGGAATTTGAAGG...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGCTAAGATATTCTTCCTaGGACTGCTGTTCCAAAATT +
Preference number: 2 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWLRYSS*DCCSKI
Trigger: AATTTTGGAACAGCAGTCTCAGGAAGAATATCTTAG...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTGGCTCCAGGTCTCTGTaGATTTCAGCTTTTTATTGG +
Preference number: 2 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPGSRSL*ISAFYW
Trigger: CCAATAAAAAGCTGAAATGCACAGAGACCTGGAGCC...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACATATCAGCCTCAAGTTaGTGGAGCAGGCCCATGTTA +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHISASS*WSRPML
Trigger: TAACATGGGCCTGCTCCAGCAACTTGAGGCTGATAT...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGAGTAAGTGCAACGATTaGAACCATTGGCAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKSKCND*NHWQCC
Trigger: ACAGCACTGCCAATGGTTCCAATCGTTGCACTTACT...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 90 bp CGAACTAGGCAGAAGCAACTTCTTTGGACACAATTCTTCATTAGCTaGAAGGATGAGGCTCTGAGATTCTGTATTAGCTTTATGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RTRQKQLLWTQFFIS*KDEALRFCISFMKP
Trigger: TGGCTTCATAAAGCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCAAAGAAGTTGCTTCTGCCTAGTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTGTTTCTGGTCCTCAGTaGGAGGAAATTTACTCCAAT +
Preference number: 2 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPVSGPQ*EEIYSN
Trigger: ATTGGAGTAAATTTCCTCTCACTGAGGACCAGAAAC...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACCAAAACCAGTACAGGTaGTCTGAGGATTTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHQNQYR*SEDFSD
Trigger: ATCTGAGAAATCCTCAGATCACCTGTACTGGTTTTG...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp GCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACAAATGGCTGCAGATCCTaGAGGATATTCCCTGTTTTT +
Preference number: 2 (lower is better)
Translates to: ANVSFINAHSKSYGSYDTNGCRS*RIFPVF
Trigger: AAAAACAGGGAATATCCTTCAGGATCTGCAGCCATT...TGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACAGTGGGAACTTGTTTTaGCAAGAAATGGCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHSGNLF*QEMAAD
Trigger: ATCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACT...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCATAAGTTTAAATTATTaGTGGGCCTCAGTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LRNTVSLIHSNERDTNISISLNY*WASVQS
Trigger: AGACTGAACTGAGGCCCAGCAATAATTTAAACTTAT...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp GCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACACTTTCCACTGAACTaGTTTAAAACTGGAATGGCC +
Preference number: 2 (lower is better)
Translates to: ANVSFINAHSKSYGSYDTHFPLN*FKTGMA
Trigger: GGCCATTCCAGTTTTAAACCAGTTCAGTGGAAAGTG...TGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGATTAAGCTGTAGCACTTaGTCTTCCATCAGAGAAATA +
Preference number: 2 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGLSCST*SSIREI
Trigger: TATTTCTCTGATGGAAGACCAAGTGCTACAGCTTAA...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTCCAAGGAAGCAAGCTaGGATGTTGGACATTTTAAG +
Preference number: 2 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHSKEAS*DVGHFK
Trigger: CTTAAAATGTCCAACATCCCAGCTTGCTTCCTTGGA...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 90 bp AGCCAATTTCTACCCTTTTTCGTAAGGGCGCAAATCTTCATAAATTaGTTATACCGAGAAACTTCTACCAAGAATCCCTCAGTGATCAGC +
Preference number: 2 (lower is better)
Translates to: SQFLPFFVRAQIFIN*LYRETSTKNPSVIS
Trigger: GCTGATCACTGAGGGATTCTTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAAAAGGGTAGAAATTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCAAATGCAGAAGCCATaGCTGGACAACAACATATCA +
Preference number: 2 (lower is better)
Translates to: VKESCQASSGGTQLFQNYQMQKP*LDNNIS
Trigger: TGATATGTTGTTGTCCAGCCATGGCTTCTGCATTTG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR CCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTGATAGAAACCCTCCGTaGGTTTTCCAATTTACTGAA +
Preference number: 2 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPDRNPP*VFQFTE
Trigger: TTCAGTAAATTGGAAAACCCACGGAGGGTTTCTATC...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp TGGACACAATTCTTCATTAGCTTGAAGGATGAGGCTCTGAGATTCTGTATTAGCGCATTTAGAATGAGTTaGTTCTACCGTGCCACTATT +
Preference number: 2 (lower is better)
Translates to: WTQFFISLKDEALRFCISAFRMS*FYRATI
Trigger: AATAGTGGCACGGTAGAACCAACTCATTCTAAATGC...GCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACGGTTTAAAACTGGAATaGCCAAAGTACATCTTGAGG +
Preference number: 2 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHGLKLE*PKYILR
Trigger: CCTCAAGATGTACTTTGGCCATTCCAGTTTTAAACC...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTCTCTGTTTGATCCTTaGCAGTGCCAAATAAACTGT +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHSLFDP*QCQINC
Trigger: ACAGTTTATTTGGCACTGGCAAGGATCAAACAGAGA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACGTTTTCAACCGTAGTTaGTCTCATTTTGGCCATATC +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHVFNRS*SHFGHI
Trigger: GATATGGCCAAAATGAGACCAACTACGGTTGAAAAC...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATAGTCATTCTTTTCAGTaGAAATGGCAAGCCATGAAA +
Preference number: 2 (lower is better)
Translates to: VKESCQASSGGTQLFQNYSHSFQ*KWQAMK
Trigger: TTTCATGGCTTGCCATTTTCACTGAAAAGAATGACT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR TCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAACCAGTACAGGTGATCTaGGGATTTCTCAGATTTAAG +
Preference number: 2 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQPVQVI*GFLRFK
Trigger: CTTAAATCTGAGAAATCCTCAGATCACCTGTACTGG...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCGGTTTCATTTTCACTaGCCTGGTCAACTAATACCA +
Preference number: 2 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNRFHFH*PGQLIP
Trigger: TGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR GCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTACAAAATATACACTTaGCTAGTGCAATTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: VKESCQASSGGTQLFQNYYKIYT*LVQLVS
Trigger: GGAGACCAATTGCACTAGGCAAGTGTATATTTTGTA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR GCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTTATTGGCATGTTTCTaGCTAGCTTCTACCAATTTG +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHLLACF*LASTNL
Trigger: CAAATTGGTAGAAGCTAGGCAGAAACATGCCAATAA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACCAGAAGCAACTTCTTTaGACACAATTCTTCATTAGC +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHQKQLL*TQFFIS
Trigger: GCTAATGAAGAATTGTGTCCAAAGAAGTTGCTTCTG...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTATAACAATGCTCTTTaGTGCCCGAAGATACAGTTT +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHYNNAL*CPKIQF
Trigger: AAACTGTATCTTCGGGCACCAAAGAGCATTGTTATA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR GCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTCATTGGGAGATAAATaGTTAAGCATCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: LFVLSINFLLVSLPLANHSLGDK*LSISIS
Trigger: AGAAATGGAGATGCTTAAGCATTTATCTCCCAATGA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp TCAAGGGGGCAGCCAGCTTTCACCGCTTGGGATAAGTaGATGCCAATTGTCATGAGAGGCAGAATCCTGCTC +
Preference number: 3 (lower is better)
Translates to: SRGQPAFTAWDK*MPIVMRGRILL
Trigger: GAGCAGGATTCTGCCTCTCATGACAATTGGCATGCACTTATCCCAAGCGGTGAAAGCTGGCTGCCCCCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp ATCAGCAATAATCTTCTGAACCTCTGGAGTCAGGCCTaGTCGCTCCAAATCAAGGGGGCAGCCAGCTTTCAC +
Preference number: 3 (lower is better)
Translates to: ISNNLLNLWSQA*SLQIKGAASFH
Trigger: GTGAAAGCTGGCTGCCCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGATTATTGCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp GTACCTAGGCATGCAGCAGACGTGTCTGTGCGTACTTaGCACTCCATCACACAGGATATTCACAGGGTATTG +
Preference number: 3 (lower is better)
Translates to: VPRHAADVSVRT*HSITQDIHRVL
Trigger: CAATACCCTGTGAATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCTAGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR TCA 72 bp ACGGGAGGGTTTCGGATAACATCAGCAATAATCTTCTaGACCTCTGGAGTCAGGCCTGCTCGCTCCAAATCA +
Preference number: 3 (lower is better)
Translates to: TGGFRITSAIIF*TSGVRPARSKS
Trigger: TGATTTGGAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGATTATTGCTGATGTTATCCGAAACCCTCCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGACTGTGCCTGCGATATaGATCGGCAAGACGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWTVPAI*IGKTLR
Trigger: TCTCAGCGTCTTGCCGATCAATATCGCAGGCACAGT...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp CTTTCACCGCTTGGGATAAGTGCATGCCAATTGTCATaGGAGGCAGAATCCTGCTCTCAGCTATGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: LSPLGISACQLS*EAESCSQLCSS
Trigger: TGAAGAGCATAGCTGAGAGCAGGATTCTGCCTCTCATGACAATTGGCATGCACTTATCCCAAGCGGTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTAAATATCAGCCTCAAGTaGCTGGAGCAGGCCCATGTT +
Preference number: 3 (lower is better)
Translates to: LANHTGNRLFLSADEVSVNISLK*LEQAHV
Trigger: AACATGGGCCTGCTCCAGCAACTTGAGGCTGATATT...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp ACAGCAATGAGCGTGATACCAATATCAGCCTCAAGTTaGTGGAGCAGGCCCATGTTACCTGAACAGTATTCT +
Preference number: 3 (lower is better)
Translates to: TAMSVIPISASS*WSRPMLPEQYS
Trigger: AGAATACTGTTCAGGTAACATGGGCCTGCTCCAGCAACTTGAGGCTGATATTGGTATCACGCTCATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp AAGCCTTCCACCAACTCTCTGTTTGATCCTTGCCAGTaGCAAATAAACTGTGCCTGCGATATTGATCGGCAA +
Preference number: 3 (lower is better)
Translates to: KPSTNSLFDPCQ*QINCACDIDRQ
Trigger: TTGCCGATCAATATCGCAGGCACAGTTTATTTGGCACTGGCAAGGATCAAACAGAGAGTTGGTGGAAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp GAAACCCTCCGTGGGTTTTCCAATTTACTGAAAGCATaGGGAAGATGCTTAGCCAGATCCATCACTTCCTCA +
Preference number: 3 (lower is better)
Translates to: ETLRGFSNLLKA*GRCLARSITSS
Trigger: TGAGGAAGTGATGGATCTGGCTAAGCATCTTCCTCATGCTTTCAGTAAATTGGAAAACCCACGGAGGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp TGTTATACCGAGAAACTTCTACCAAGAATCCCTCAGTaGTCAGCTGACGGGAAAAAGCCTTCCACCAACTCT +
Preference number: 3 (lower is better)
Translates to: CYTEKLLPRIPQ*SADGKKPSTNS
Trigger: AGAGTTGGTGGAAGGCTTTTTCCCGTCAGCTGATCACTGAGGGATTCTTGGTAGAAGTTTCTCGGTATAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp AGATCTCTTCAGAACCGGGAAAACATCTCCTTTTGTTaGCATCACATGAAGGTTGAAGTCCGCTGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: RSLQNRENISFC*HHMKVEVRCQD
Trigger: GTCCTGACAGCGGACTTCAACCTTCATGTGATGTCAACAAAAGGAGATGTTTTCCCGGTTCTGAAGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp CTGGAATGGCCAAAGTACATCTTGAGGCAAGTAACTTaGTCTTCATTGGGTGCTGGCCACAAAAAGTCCTTA +
Preference number: 3 (lower is better)
Translates to: LEWPKYILRQVT*SSLGAGHKKSL
Trigger: TAAGGACTTTTTGTGGCCAGCACCCAATGAAGAGCAAGTTACTTGCCTCAAGATGTACTTTGGCCATTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp TGGACACAATTCTTCATTAGCTTGAAGGATGAGGCTCTGAGATTCTGTATTAGCGACGTGACAAGAACTTaGAAGTCCATCACGACCAGC +
Preference number: 3 (lower is better)
Translates to: WTQFFISLKDEALRFCISDVTRT*KSITTS
Trigger: GCTGGTCGTGATGGACTTCAAAGTTCTTGTCACGTC...GCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp AAATGCTTGTGGACCAAAGTCCCAGGATGTATCCTCTaGGTCATCCATGGAATAGCAATGATCCAATCTGGA +
Preference number: 3 (lower is better)
Translates to: KCLWTKVPGCIL*VIHGIAMIQSG
Trigger: TCCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACTTTGGTCCACAAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 72 bp GCACACACAAAAGCATGCAAATGCAGAAGCCATGGCTaGACAACAACATATCACATATTTAATAGGCGCCAC +
Preference number: 3 (lower is better)
Translates to: AHTKACKCRSHG*TTTYHIFNRRH
Trigger: GTGGCGCCTATTAAATATGTGATATGTTGTTGTCCAGCCATGGCTTCTGCATTTGCATGCTTTTGTGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR CCA 72 bp GACCAAAGTCCCAGGATGTATCCTCTGAGTCATCCATaGAATAGCAATGATCCAATCTGGACCTGCAATTAT +
Preference number: 3 (lower is better)
Translates to: DQSPRMYPLSHP*NSNDPIWTCNY
Trigger: ATAATTGCAGGTCCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACTTTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTAGGAAATTTACTCCAATaGCTACAGCGGATAGACTTG +
Preference number: 3 (lower is better)
Translates to: LANHTGNRLFLSADEVSVGNLLQ*LQRIDL
Trigger: CAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCC...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACCTACAGCGGATAGACTaGTCTTTCAGGAGCTGTTTA +
Preference number: 3 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHLQRID*SFRSCL
Trigger: TAAACAGCTCCTGAAAGACAAGTCTATCCGCTGTAG...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTAATTGAAGTCAACTGTTaGTTCATGTCGCTAAGTAGG +
Preference number: 3 (lower is better)
Translates to: LANHTGNRLFLSADEVSVIEVNC*FMSLSR
Trigger: CCTACTTAGCGACATGAACAAACAGTTGACTTCAAT...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTATCTACCGTGCCACTATaGAGGTTTTCTAAAGACTTA +
Preference number: 3 (lower is better)
Translates to: LANHTGNRLFLSADEVSVSTVPL*RFSKDL
Trigger: TAAGTCTTTAGAAAACCTCAATAGTGGCACGGTAGA...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 72 bp AGAGATAACAAGGCCAATCTTGCCTACATAAACAGGTaGATACTGGAAGCACAAACTCTTTCCATATCCAGT +
Preference number: 3 (lower is better)
Translates to: RDNKANLAYINR*ILEAQTLSISS
Trigger: ACTGGATATGGAAAGAGTTTGTGCTTCCAGTATCCACCTGTTTATGTAGGCAAGATTGGCCTTGTTATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 72 bp TTCAAATTCCCAGTGGGAACTTGTTTTGACAAGAAATaGCTGCAGATCCTGAAGGATATTCCCTGTTTTTCG +
Preference number: 3 (lower is better)
Translates to: FKFPVGTCFDKK*LQILKDIPCFS
Trigger: CGAAAAACAGGGAATATCCTTCAGGATCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACTGGGAATTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACCAGTGGGAACTTGTTTaGACAAGAAATGGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LFVLSINFLLVSLPLANHQWELV*TRNGCR
Trigger: TCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACTG...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTCATTTCAGCTTTTTATaGGCAACATCTGTCAACTCC +
Preference number: 3 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPHFSFL*ATSVNS
Trigger: GGAGTTGACAGATGTTGCCAATAAAAAGCTGAAATG...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTTCACTTCCTCAGAGATaGAAGTCAACTGTTTGTTCA +
Preference number: 3 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPSLPQR*KSTVCS
Trigger: TGAACAAACAGTTGACTTCAATCTCTGAGGAAGTGA...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp ATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTGAATTTCATCTCTAAGCAAGCTGGGATGTaGGACATTTTAAGCTGTAGC +
Preference number: 3 (lower is better)
Translates to: INAHSKSYGSYDTLNFISKQAGM*DILSCS
Trigger: GCTACAGCTTAAAATGTCCAACATCCCAGCTTGCTT...AGAGATGAAATTCAGTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp TACAGGTTTGGTCGATCAAAACCAGTACAGGTGATCTaGGGATTTCTCAGATTTAAGCAACGTACAATGTCT +
Preference number: 3 (lower is better)
Translates to: YRFGRSKPVQVI*GFLRFKQRTMS
Trigger: AGACATTGTACGTTGCTTAAATCTGAGAAATCCTCAGATCACCTGTACTGGTTTTGATCGACCAAACCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp TGGGAACTTGTTTTGACAAGAAATGGCTGCAGATCCTaGAGGATATTCCCTGTTTTTCGCCTAACTTCTAAA +
Preference number: 3 (lower is better)
Translates to: WELVLTRNGCRS*RIFPVFRLTSK
Trigger: TTTAGAAGTTAGGCGAAAAACAGGGAATATCCTTCAGGATCTGCAGCCATTTCTTGTCAAAACAAGTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp TCGGTAAATAATAAAACCAGCATAAGCATCAGTGGCTaGATACAGTTTCTGGTCCTCAGTGAGAGGAAATTT +
Preference number: 3 (lower is better)
Translates to: SVNNKTSISISG*IQFLVLSERKF
Trigger: AAATTTCCTCTCACTGAGGACCAGAAACTGTATGCAGCCACTGATGCTTATGCTGGTTTTATTATTTACCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp ATAGCTGGGGGAACATCCATTTTATTGGCATGTTTCTaGCTAGCTTCTACCAATTTGCCATATAACACAATC +
Preference number: 3 (lower is better)
Translates to: IAGGTSILLACF*LASTNLPYNTI
Trigger: GATTGTGTTATATGGCAAATTGGTAGAAGCTAGGCAGAAACATGCCAATAAAATGGATGTTCCCCCAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp TTTCCAAGTACATCTTCTCCATCATGTTTAGCTAAATaGTCAAGTGTTGGGTCCCATGTTTCATCTTCAACG +
Preference number: 3 (lower is better)
Translates to: FPSTSSPSCLAK*SSVGSHVSSST
Trigger: CGTTGAAGATGAAACATGGGACCCAACACTTGATCATTTAGCTAAACATGATGGAGAAGATGTACTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR TCA 72 bp CTAAATACAGGTTTGGTCGATCAAAACCAGTACAGGTaGTCTGAGGATTTCTCAGATTTAAGCAACGTACAA +
Preference number: 3 (lower is better)
Translates to: LNTGLVDQNQYR*SEDFSDLSNVQ
Trigger: TTGTACGTTGCTTAAATCTGAGAAATCCTCAGATCACCTGTACTGGTTTTGATCGACCAAACCTGTATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CCA 72 bp TTGTGTCATTTTTCTAGAAGGACAGTAGATGATTGTTaGACCTTCAAATTCCCAGTGGGAACTTGTTTTGAC +
Preference number: 3 (lower is better)
Translates to: LCHFSRRTVDDC*TFKFPVGTCFD
Trigger: GTCAAAACAAGTTCCCACTGGGAATTTGAAGGTCCAACAATCATCTACTGTCCTTCTAGAAAAATGACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATACTTGCCTAGTGCAATaGGTCTCCATTTTACATTTT +
Preference number: 3 (lower is better)
Translates to: VKESCQASSGGTQLFQNYTCLVQ*VSILHF
Trigger: AAAATGTAAAATGGAGACCAATTGCACTAGGCAAGT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATATACAAAATATACACTaGCCTAGTGCAATTGGTCTC +
Preference number: 3 (lower is better)
Translates to: VKESCQASSGGTQLFQNYIQNIH*PSAIGL
Trigger: GAGACCAATTGCACTAGGCAAGTGTATATTTTGTAT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR-3UTR CAA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAACTAAATGATCAAGTGTaGGGTCCCATGTTTCATCTT +
Preference number: 3 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQLNDQV*GPMFHL
Trigger: AAGATGAAACATGGGACCCAACACTTGATCATTTAG...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR-3UTR CAA 90 bp ATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTGAATTTCATCTCTTTCACCTGTAACTTGTaGTGTCATTTTTCTAGAAGG +
Preference number: 3 (lower is better)
Translates to: INAHSKSYGSYDTLNFISFTCNL*CHFSRR
Trigger: CCTTCTAGAAAAATGACACAACAAGTTACAGGTGAA...AGAGATGAAATTCAGTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR GCA 72 bp TATTTAATGGCACCCAAAATGCGGTTTCATTTTCACTaGCCTGGTCAACTAATACCATTTAACAACGTATTT +
Preference number: 3 (lower is better)
Translates to: YLMAPKMRFHFH*PGQLIPFNNVF
Trigger: AAATACGTTGTTAAATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGTCGCCAGGCTGGGGTaGAGTGGCGCAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCVARLG*SGAVSA
Trigger: AGCTGAGACTGCGCCACTGCACCCCAGCCTGGCGAC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGTGGTCTCGATCTCCTaGTCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCVVSIS*SRDPPA
Trigger: GGCGGGCGGATCACGAGATCAGGAGATCGAGACCAC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGCTCTGTCGCCAGGCTaGGGTGCAGTGGCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIALSPG*GAVAQS
Trigger: AGACTGCGCCACTGCACCCCAGCCTGGCGACAGAGC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTACTTTATTCCCGCGCTaGCGAGTACAAGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCTLFPR*RVQAGA
Trigger: GGCGCCGGCTTGTACTCGGCAGCGCGGGAATAAAGT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTTCTTCTTCAGCCGGATaGCTGTGGAGCGCCACCACA +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCSSSAG*LWSATT
Trigger: TGTGGTGGCGCTCCACAGTCATCCGGCTGAAGAAGA...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGGGGTTTCACCATGTTaGCCAGGGTGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIGVSPC*PGWSRS
Trigger: AGATCGAGACCACCCTGGCCAACATGGTGAAACCCC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGCTCTGGAGTCAGGCCTaGTCGCTCCAAATCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVLWSQA*SLQIKG
Trigger: CCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAG...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTTCAGCCTCAAGTTGCTaGAGCAGGCCCATGTTACCT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDISASSC*SRPMLP
Trigger: AGGTAACATGGGCCTGCTCCAGCAACTTGAGGCTGA...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTTCCCTGGGGAAAAACTaGCATGGAAGAAACGTGGAA +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCSLGKN*HGRNVE
Trigger: TTCCACGTTTCTTCCATGTCAGTTTTTCCCCAGGGA...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGAGCACCGTAATGAATaGCTTGGCGAATGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCEHRNE*LGECQL
Trigger: AAGCTGACATTCGCCAAGTCATTCATTACGGTGCTC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTACAGAGGGGCCAACATaGCAGCTTTGCCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDITEGPT*QLCLQK
Trigger: TTTCTGAAGGCAAAGCTGCCATGTTGGCCCCTCTGT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCCAGCTTTCACCGCTTaGGATAAGTGCATGCCAATT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCPAFTA*DKCMPI
Trigger: AATTGGCATGCACTTATCCCAAGCGGTGAAAGCTGG...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGCCCAACTTCCTGAATaGATCCCTAAAATCATGCCC +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIAQLPE*IPKIMP
Trigger: GGGCATGATTTTAGGGATTCATTCAGGAAGTTGGGC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGGCTCCAGGTCTCTGTaGATTTCAGCTTTTTATTGG +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCGSRSL*ISAFYW
Trigger: CCAATAAAAAGCTGAAATGCACAGAGACCTGGAGCC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTACACAATGGATCCAGTaGATTCTAAGAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDITQWIQ*ILRRGG
Trigger: ACCTCCCCTTCTTAGAATTCACTGGATCCATTGTGT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGTTTCTGGTCCTCAGTaGGAGGAAATTTACTCCAAT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCVSGPQ*EEIYSN
Trigger: ATTGGAGTAAATTTCCTCTCACTGAGGACCAGAAAC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCCAGTACAGGTGATCTaGGGATTTCTCAGATTTAAG +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCPVQVI*GFLRFK
Trigger: CTTAAATCTGAGAAATCCTCAGATCACCTGTACTGG...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTATGAAGTCTCAGTATTaGTGCCTACTTCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCMKSQY*CLLLPC
Trigger: GCAAGGAAGAAGTAGGCATCAATACTGAGACTTCAT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTCTTTCTCTCTGCAGATaGAGTCTCAGTATTGATGCC +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDILSLCR*SLSIDA
Trigger: GGCATCAATACTGAGACTTCATCTGCAGAGAGAAAG...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCTCTGGAGTCAGGCCTaGTCGCTCCAAATCAAGGGG +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILWSQA*SLQIKG
Trigger: CCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCGGTTTCATTTTCACTaGCCTGGTCAACTAATACCA +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCRFHFH*PGQLIP
Trigger: TGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCG...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGGGGAAAAACTGACATaGAAGAAACGTGGAACAAGT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCGEKLT*KKRGTS
Trigger: ACTTGTTCCACGTTTCTTCCATGTCAGTTTTTCCCC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGTCAGCCTCAAGTTGCTaGAGCAGGCCCATGTTACCT +
Preference number: 4 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWSASSC*SRPMLP
Trigger: AGGTAACATGGGCCTGCTCCAGCAACTTGAGGCTGA...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTAGTAAGTGCAACGATTaGAACCATTGGCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDISKCND*NHWQCC
Trigger: ACAGCACTGCCAATGGTTCCAATCGTTGCACTTACT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTAGCAATGATCCAATCTaGACCTGCAATTATCACAGC +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCSNDPI*TCNYHS
Trigger: GCTGTGATAATTGCAGGTCCAGATTGGATCATTGCT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTCTGTCAAGCTTCCAGTaGAGGAACACAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDILSSFQ*RNTTFP
Trigger: TGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAG...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACATCTTCTTCAGCCGGATaGCTGTGGAGCGCCACCACA +
Preference number: 4 (lower is better)
Translates to: ANVSFINAHSKSYGSYDTSSSAG*LWSATT
Trigger: TGTGGTGGCGCTCCACAGTCATCCGGCTGAAGAAGA...TGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTCAAAACCAGTACAGGTaGTCTGAGGATTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIQNQYR*SEDFSD
Trigger: ATCTGAGAAATCCTCAGATCACCTGTACTGGTTTTG...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTAGTGGGAACTTGTTTTaGCAAGAAATGGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDISGNLF*QEMAAD
Trigger: ATCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGGCATGCCAATTGTCATaGGAGGCAGAATCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWACQLS*EAESCS
Trigger: AGAGCAGGATTCTGCCTCTCATGACAATTGGCATGC...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTACTCTTCCGAACACATaGCTTTCTTTCTTCTACAGC +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDITLPNT*LSFFYS
Trigger: GCTGTAGAAGAAAGAAAGGCATGTGTTCGGAAGAGT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTTCTCTGTTTGATCCTTaGCAGTGCCAAATAAACTGT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCSLFDP*QCQINC
Trigger: ACAGTTTATTTGGCACTGGCAAGGATCAAACAGAGA...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGATAGAAACCCTCCGTaGGTTTTCCAATTTACTGAA +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCDRNPP*VFQFTE
Trigger: TTCAGTAAATTGGAAAACCCACGGAGGGTTTCTATC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTCCTCTGAGTCATCCATaGAATAGCAATGATCCAATC +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIPLSHP*NSNDPI
Trigger: GATTGGATCATTGCTATTCCATGGATGACTCAGAGG...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTATCTCAATTGCCATGTaGATAAGGTACGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCISIAM*IRYVSM
Trigger: CATTGACACGTACCTTATCCACATGGCAATTGAGAT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGCAAATCTCATTGTCTaGCTTAACAAAAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCANLIV*LNKSGC
Trigger: ACAGCCACTTTTGTTAAGCCAGACAATGAGATTTGC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGACACAATGGATCCAGTaGATTCTAAGAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVTQWIQ*ILRRGG
Trigger: ACCTCCCCTTCTTAGAATTCACTGGATCCATTGTGT...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACCCCTCAGTGATCAGCTaGCGGGAAAAAGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHPSVIS*REKAFH
Trigger: GTGGAAGGCTTTTTCCCGTCAGCTGATCACTGAGGG...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTAACATCACATGAAGGTTaGAGTCCGCTGTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LANHTGNRLFLSADEVSVTSHEG*SPLSGP
Trigger: TGGTCCTGACAGCGGACTTCAACCTTCATGTGATGT...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGATCCAATCTGGACCTaGAATTATCACAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCDPIWT*NYHSIF
Trigger: AAAAATGCTGTGATAATTGCAGGTCCAGATTGGATC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTAGACAAAAGCTTAAATaGTTGTGGACCAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIRQKLK*LWTKVP
Trigger: TGGGACTTTGGTCCACAAGCATTTAAGCTTTTGTCT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTTTATTGGCATGTTTCTaGCTAGCTTCTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCLLACF*LASTNL
Trigger: CAAATTGGTAGAAGCTAGGCAGAAACATGCCAATAA...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGACCGCTTGGGATAAGTaGATGCCAATTGTCATGAGA +
Preference number: 4 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVTAWDK*MPIVMR
Trigger: TCTCATGACAATTGGCATGCACTTATCCCAAGCGGT...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGCAGCATAAGCATCAGTaGCTGCATACAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVQHKHQ*LHTVSG
Trigger: ACCAGAAACTGTATGCAGCCACTGATGCTTATGCTG...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTTGTTTTGACAAGAAATaGCTGCAGATCCTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDICFDKK*LQILKD
Trigger: ATCCTTCAGGATCTGCAGCCATTTCTTGTCAAAACA...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTCTAAGATATTCTTCCTaGGACTGCTGTTCCAAAATT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDILRYSS*DCCSKI
Trigger: AATTTTGGAACAGCAGTCTCAGGAAGAATATCTTAG...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGAGAGCACCGTAATGAATaGCTTGGCGAATGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGEHRNE*LGECQL
Trigger: AAGCTGACATTCGCCAAGTCATTCATTACGGTGCTC...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTACCAGGATGTATCCTCTaGGTCATCCATGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: LANHTGNRLFLSADEVSVPGCIL*VIHGIA
Trigger: TGCTATTCCATGGATGACTCAGAGGATACATCCTGG...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCCAAGAATCCCTCAGTaGTCAGCTGACGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIPRIPQ*SADGKK
Trigger: CTTTTTCCCGTCAGCTGATCACTGAGGGATTCTTGG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR TCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGCATTCAATCCATTTTaGTATGCTGTTTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIAFNPF*YAVLAE
Trigger: TTCAGCCAAAACAGCATATCAAAATGGATTGAATGC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAAACTTTATTCCCGCGCTaGCGAGTACAAGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQTLFPR*RVQAGA
Trigger: GGCGCCGGCTTGTACTCGGCAGCGCGGGAATAAAGT...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTATAAGTTTAAATTATTaGTGGGCCTCAGTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KQVLLLETASYLGMQQTCISLNY*WASVQS
Trigger: AGACTGAACTGAGGCCCAGCAATAATTTAAACTTAT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGCAAATAAACTGTGCCTaGGATATTGATCGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVQINCA*DIDRQD
Trigger: GTCTTGCCGATCAATATCGCAGGCACAGTTTATTTG...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTTACAAAATATACACTTaGCTAGTGCAATTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIYKIYT*LVQLVS
Trigger: GGAGACCAATTGCACTAGGCAAGTGTATATTTTGTA...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTTTAAGCTGTAGCACTTaGTCTTCCATCAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDILSCST*SSIREI
Trigger: TATTTCTCTGATGGAAGACCAAGTGCTACAGCTTAA...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTTATAACAATGCTCTTTaGTGCCCGAAGATACAGTTT +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDIYNNAL*CPKIQF
Trigger: AAACTGTATCTTCGGGCACCAAAGAGCATTGTTATA...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTACAGAGGGGCCAACATaGCAGCTTTGCCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTITEGPT*QLCLQK
Trigger: TTTCTGAAGGCAAAGCTGCCATGTTGGCCCCTCTGT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGACCAGCTTTCACCGCTTaGGATAAGTGCATGCCAATT +
Preference number: 4 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGPAFTA*DKCMPI
Trigger: AATTGGCATGCACTTATCCCAAGCGGTGAAAGCTGG...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp GCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACAAATCTTCTGAACCTCTaGAGTCAGGCCTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ANVSFINAHSKSYGSYDTNLLNL*SQACSL
Trigger: GAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGATT...TGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 72 bp ACTGGAATGGCCAAAGTACATCTTGAGGCAAGTAACTaGCTCTTCATTGGGTGCTGGCCACAAAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TGMAKVHLEASN*LFIGCWPQKVL
Trigger: AAGGACTTTTTGTGGCCAGCACCCAATGAAGAGCAAGTTACTTGCCTCAAGATGTACTTTGGCCATTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTCCTCAGTGAAAATGTCTTCCCGGATTaGAGAACTTGCAGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLSSVSMLVDPIIILLSENVFPD*RTCSSS
Trigger: ACTGCTACTGCAAGTTCTTCAATCCGGGAAGACATT...TTCACTGAGGAGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGAATGGCTGCAGATCCTaGAGGATATTCCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWNGCRS*RIFPVF
Trigger: AAAAACAGGGAATATCCTTCAGGATCTGCAGCCATT...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCAGTGGGAACTTGTTTTaGCAAGAAATGGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LRNTVSLIHSNERDTNISSGNLF*QEMAAD
Trigger: ATCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACT...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCGAATCCCTAAAATCATaGCCCCACTCAGAAATACAG +
Preference number: 4 (lower is better)
Translates to: LRNTVSLIHSNERDTNISESLKS*PHSEIQ
Trigger: CTGTATTTCTGAGTGGGGGCATGATTTTAGGGATTC...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGATGCAGTAGCAGTAAGTaGAACGATTGGAACCATTGG +
Preference number: 4 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGCSSSK*NDWNHW
Trigger: CCAATGGTTCCAATCGTTGCACTTACTGCTACTGCA...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGTCTCTGTTTGATCCTTaGCAGTGCCAAATAAACTGT +
Preference number: 4 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVSLFDP*QCQINC
Trigger: ACAGTTTATTTGGCACTGGCAAGGATCAAACAGAGA...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCCACTTTCCACTGAACTaGTTTAAAACTGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: LRNTVSLIHSNERDTNISHFPLN*FKTGMA
Trigger: GGCCATTCCAGTTTTAAACCAGTTCAGTGGAAAGTG...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGAAGCTTAAATGCTTGTaGACCAAAGTCCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWKLKCL*TKVPGC
Trigger: ACATCCTGGGACTTTGGTCCACAAGCATTTAAGCTT...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTCTCCAATTTTATCATTaGCACAACAAATACCAGTTG +
Preference number: 4 (lower is better)
Translates to: RHAADVSVRTCHSITQDILQFYH*HNKYQL
Trigger: CAACTGGTATTTGTTGTGCCAATGATAAAATTGGAG...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR CAA 72 bp AGTTTCTGGTCCTCAGTGAGAGGAAATTTACTCCAATaGCTACAGCGGATAGACTTGTCTTTCAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SFWSSVRGNLLQ*LQRIDLSFRSC
Trigger: ACAGCTCCTGAAAGACAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCCTCTCACTGAGGACCAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGAGTTTCTGGTCCTCAGTaGGAGGAAATTTACTCCAAT +
Preference number: 4 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGVSGPQ*EEIYSN
Trigger: ATTGGAGTAAATTTCCTCTCACTGAGGACCAGAAAC...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCTTTAAGCATTTAGAATaGGTTGGTTCTACCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRNTVSLIHSNERDTNISFKHLE*VGSTVP
Trigger: TGGCACGGTAGAACCAACTCATTCTAAATGCTTAAA...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTCACTCAGAAATACAGTaGGCCTCATCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPHSEIQ*ASSTAM
Trigger: CATTGCTGTGGATGAGGCTCACTGTATTTCTGAGTG...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTAATGTCTTCCCGGATTaGAGAACTTGCAGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTINVFPD*RTCSSS
Trigger: ACTGCTACTGCAAGTTCTTCAATCCGGGAAGACATT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR TCA 90 bp TGGACACAATTCTTCATTAGCTTGAAGGATGAGGCTCTGAGATTCTGTATTAGCCACCAACTCTCTGTTTaGTCCTTGCCAGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: WTQFFISLKDEALRFCISHQLSV*SLPVPN
Trigger: ATTTGGCACTGGCAAGGATCAAACAGAGAGTTGGTG...GCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCCCTCAGTGATCAGCTaGCGGGAAAAAGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNPSVIS*REKAFH
Trigger: GTGGAAGGCTTTTTCCCGTCAGCTGATCACTGAGGG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCCAAGAATCCCTCAGTaGTCAGCTGACGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYPRIPQ*SADGKK
Trigger: CTTTTTCCCGTCAGCTGATCACTGAGGGATTCTTGG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATACATCACATGAAGGTTaGAGTCCGCTGTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYTSHEG*SPLSGP
Trigger: TGGTCCTGACAGCGGACTTCAACCTTCATGTGATGT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCTTTCTCTCTGCAGATaGAGTCTCAGTATTGATGCC +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILSLCR*SLSIDA
Trigger: GGCATCAATACTGAGACTTCATCTGCAGAGAGAAAG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR GCA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGTTGAGGCAAGTAACTTaGTCTTCATTGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKLRQVT*SSLGAG
Trigger: GCCAGCACCCAATGAAGAGCAAGTTACTTGCCTCAA...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGAGACAAAAGCTTAAATaGTTGTGGACCAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWRQKLK*LWTKVP
Trigger: TGGGACTTTGGTCCACAAGCATTTAAGCTTTTGTCT...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCCAACATGGCAGCTTTaGCTTCAGAAACACCATCAA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIPTWQL*LQKHHQ
Trigger: TTGATGGTGTTTCTGAAGGCAAAGCTGCCATGTTGG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR GCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTACAAAAGCATGCAAATaGAGAAGCCATGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTITKACK*RSHGWT
Trigger: TGTCCAGCCATGGCTTCTGCATTTGCATGCTTTTGT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCTGAGGCGGGAGGACTaGTTGAAAGAAAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILRRED*LKERKR
Trigger: TCTTTTTCTTTCTTTCAAGCAGTCCTCCCGCCTCAG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACGCAGTCTCAGCTCACTaGAATCTCCGCCTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNAVSAH*NLRLLS
Trigger: ACTCAGGAGGCGGAGATTGCAGTGAGCTGAGACTGC...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCAGCATAAGCATCAGTaGCTGCATACAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIQHKHQ*LHTVSG
Trigger: ACCAGAAACTGTATGCAGCCACTGATGCTTATGCTG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGGCATTTAGAATGAGTTaGTTCTACCGTGCCACTATT +
Preference number: 4 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWAFRMS*FYRATI
Trigger: AATAGTGGCACGGTAGAACCAACTCATTCTAAATGC...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTAAACTCATGCCCGCATaGTATGTTCCACAGGATAGA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIKLMPA*YVPQDR
Trigger: TCTATCCTGTGGAACATACCATGCGGGCATGAGTTT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp GGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTCCTCAGTGAACCTCTGAGTCATCCATaGAATAGCAATGATCCAATC +
Preference number: 4 (lower is better)
Translates to: GLSSVSMLVDPIIILLSEPLSHP*NSNDPI
Trigger: GATTGGATCATTGCTATTCCATGGATGACTCAGAGG...TTCACTGAGGAGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGTATAACAATGCTCTTTaGTGCCCGAAGATACAGTTT +
Preference number: 4 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVYNNAL*CPKIQF
Trigger: AAACTGTATCTTCGGGCACCAAAGAGCATTGTTATA...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCATCTCAATTGCCATGTaGATAAGGTACGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: LRNTVSLIHSNERDTNISISIAM*IRYVSM
Trigger: CATTGACACGTACCTTATCCACATGGCAATTGAGAT...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCCATGTTGGCCAGGGTaGTCTCGATCTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNPCWPG*SRSPDL
Trigger: GAGATCAGGAGATCGAGACCACCCTGGCCAACATGG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp TTCTGGTCCTCAGTGAGAGGAAATTTACTCCAATTGCTACAGCGGATAGACTTGCAAAATGAGACAAGATaGTTTGTCTCCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: FWSSVRGNLLQLLQRIDLQNETR*FVSYIC
Trigger: GCAGATGTAGGAGACAAATCATCTTGTCTCATTTTG...CAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCCTCTCACTGAGGACCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCCAGGATGTATCCTCTaGGTCATCCATGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYPGCIL*VIHGIA
Trigger: TGCTATTCCATGGATGACTCAGAGGATACATCCTGG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCACCAACTCTCTGTTTaGTCCTTGCCAGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYHQLSV*SLPVPN
Trigger: ATTTGGCACTGGCAAGGATCAAACAGAGAGTTGGTG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCGATGGCCATAGACTGTaGAAGTGTGCATATTTTATT +
Preference number: 4 (lower is better)
Translates to: LRNTVSLIHSNERDTNISDGHRL*KCAYFI
Trigger: AATAAAATATGCACACTTTCACAGTCTATGGCCATC...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTGTCCATCTTGTACTCTaGACAGATCTTTTACCCAGT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIVHLVL*TDLLPS
Trigger: ACTGGGTAAAAGATCTGTTCAGAGTACAAGATGGAC...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTTCAGGACATTTCCGCTaGTGTGCAGTTGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPSGHFR*CAVVSN
Trigger: ATTGGAAACAACTGCACAGCAGCGGAAATGTCCTGA...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTATAAGCATCAGTGGCTaGATACAGTTTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPISISG*IQFLVL
Trigger: GAGGACCAGAAACTGTATGCAGCCACTGATGCTTAT...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTTTGCTCTTCATTGGGTaGTGGCCACAAAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPLLFIG*WPQKVL
Trigger: AAGGACTTTTTGTGGCCAGCACCCAATGAAGAGCAA...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTTGAGGCAAGTAACTTaGTCTTCATTGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYLRQVT*SSLGAG
Trigger: GCCAGCACCCAATGAAGAGCAAGTTACTTGCCTCAA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTGAATCCCTAAAATCATaGCCCCACTCAGAAATACAG +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIESLKS*PHSEIQ
Trigger: CTGTATTTCTGAGTGGGGGCATGATTTTAGGGATTC...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR GCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTAACAATGCTCTTTGGTaGCCGAAGATACAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTINNALW*PKIQFS
Trigger: CGAAAACTGTATCTTCGGGCACCAAAGAGCATTGTT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR GCA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCTTATTGGCATGTTTCTaGCTAGCTTCTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: LRNTVSLIHSNERDTNISLLACF*LASTNL
Trigger: CAAATTGGTAGAAGCTAGGCAGAAACATGCCAATAA...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp GCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTCTTCATTGGGTGCTaGCCACAAAAAGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: ANVSFINAHSKSYGSYDTLFIGC*PQKVLI
Trigger: GATAAGGACTTTTTGTGGCCAGCACCCAATGAAGAG...TGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTGCCTACATAAACAGGTaGATACTGGAAGCACAAACT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIAYINR*ILEAQT
Trigger: AGTTTGTGCTTCCAGTATCCACCTGTTTATGTAGGC...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTTCCAAGGAAGCAAGCTaGGATGTTGGACATTTTAAG +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTISKEAS*DVGHFK
Trigger: CTTAAAATGTCCAACATCCCAGCTTGCTTCCTTGGA...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTAGTAAGTGCAACGATTaGAACCATTGGCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPSKCND*NHWQCC
Trigger: ACAGCACTGCCAATGGTTCCAATCGTTGCACTTACT...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp GGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTCCTCAGTGAATGTTTTGACAAGAAATaGCTGCAGATCCTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GLSSVSMLVDPIIILLSECFDKK*LQILKD
Trigger: ATCCTTCAGGATCTGCAGCCATTTCTTGTCAAAACA...TTCACTGAGGAGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTAAGCTTAAATGCTTGTaGACCAAAGTCCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIKLKCL*TKVPGC
Trigger: ACATCCTGGGACTTTGGTCCACAAGCATTTAAGCTT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACAATCTTCTGAACCTCTaGAGTCAGGCCTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNNLLNL*SQACSL
Trigger: GAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGATT...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTTGCAGAAGCCATGGCTaGACAACAACATATCACATA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTICRSHG*TTTYHI
Trigger: TATGTGATATGTTGTTGTCCAGCCATGGCTTCTGCA...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCATGCTAATATCTTCTaGCAGGAAAGAGCAATCACT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIHANIF*QERAIT
Trigger: AGTGATTGCTCTTTCCTGTCAGAAGATATTAGCATG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTTTTAAGCATTTAGAATaGGTTGGTTCTACCGTGCCA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIFKHLE*VGSTVP
Trigger: TGGCACGGTAGAACCAACTCATTCTAAATGCTTAAA...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR TCA 90 bp ATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTGAATTTCATCTCTGCCCAACTTCCTGAATaGATCCCTAAAATCATGCCC +
Preference number: 4 (lower is better)
Translates to: INAHSKSYGSYDTLNFISAQLPE*IPKIMP
Trigger: GGGCATGATTTTAGGGATTCATTCAGGAAGTTGGGC...AGAGATGAAATTCAGTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACGCATGCCAATTGTCATaGGAGGCAGAATCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNACQLS*EAESCS
Trigger: AGAGCAGGATTCTGCCTCTCATGACAATTGGCATGC...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTTTGTTGACATCACATaGAGGTTGAAGTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYFVDIT*RLKSAV
Trigger: GACAGCGGACTTCAACCTTCATGTGATGTCAACAAA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTTTGTTGACATCACATaGAGGTTGAAGTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFVLSINFLLVSLPLANHFVDIT*RLKSAV
Trigger: GACAGCGGACTTCAACCTTCATGTGATGTCAACAAA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACGCTTCTCTTAGAACTTaGACAGATCTCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHASLRT*TDLFRT
Trigger: GGTTCTGAAGAGATCTGTTCAAGTTCTAAGAGAAGC...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTCAGGACATTTCCGCTaGTGTGCAGTTGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYSGHFR*CAVVSN
Trigger: ATTGGAAACAACTGCACAGCAGCGGAAATGTCCTGA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATATAAGCATCAGTGGCTaGATACAGTTTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYISISG*IQFLVL
Trigger: GAGGACCAGAAACTGTATGCAGCCACTGATGCTTAT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGATAAGTTTAAATTATTaGTGGGCCTCAGTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWISLNY*WASVQS
Trigger: AGACTGAACTGAGGCCCAGCAATAATTTAAACTTAT...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATACCGCTTGGGATAAGTaGATGCCAATTGTCATGAGA +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYTAWDK*MPIVMR
Trigger: TCTCATGACAATTGGCATGCACTTATCCCAAGCGGT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp GGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTCCTCAGTGAAAGTTTAAATTATTGCTaGGCCTCAGTTCAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLSSVSMLVDPIIILLSESLNYC*ASVQSQ
Trigger: TTGAGACTGAACTGAGGCCCAGCAATAATTTAAACT...TTCACTGAGGAGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTGCATTTAGAATGAGTTaGTTCTACCGTGCCACTATT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIAFRMS*FYRATI
Trigger: AATAGTGGCACGGTAGAACCAACTCATTCTAAATGC...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCTCTTCATTGGGTGCTaGCCACAAAAAGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYLFIGC*PQKVLI
Trigger: GATAAGGACTTTTTGTGGCCAGCACCCAATGAAGAG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACGCCTACATAAACAGGTaGATACTGGAAGCACAAACT +
Preference number: 4 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHAYINR*ILEAQT
Trigger: AGTTTGTGCTTCCAGTATCCACCTGTTTATGTAGGC...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp TGGACACAATTCTTCATTAGCTTGAAGGATGAGGCTCTGAGATTCTGTATTAGCAGCAATGATCCAATCTaGACCTGCAATTATCACAGC +
Preference number: 4 (lower is better)
Translates to: WTQFFISLKDEALRFCISSNDPI*TCNYHS
Trigger: GCTGTGATAATTGCAGGTCCAGATTGGATCATTGCT...GCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTTGTTGCCAGAATAGCTaGGGGAACATCCATTTTATT +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTICCQNS*GNIHFI
Trigger: AATAAAATGGATGTTCCCCCAGCTATTCTGGCAACA...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR TCA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTCATGTTTAGCTAAATaGTCAAGTGTTGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHSCLAK*SSVGSH
Trigger: ATGGGACCCAACACTTGATCATTTAGCTAAACATGA...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCACTCAGAAATACAGTaGGCCTCATCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNHSEIQ*ASSTAM
Trigger: CATTGCTGTGGATGAGGCTCACTGTATTTCTGAGTG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTGTAGCTATGACACACTaGATTTCATCTCTTACAAAC +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIVAMTH*ISSLTN
Trigger: GTTTGTAAGAGATGAAATTCAGTGTGTCATAGCTAC...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACTCAGCAATAATCTTCTaGACCTCTGGAGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNSAIIF*TSGVRP
Trigger: AGGCCTGACTCCAGAGGTTCAGAAGATTATTGCTGA...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAATCAGCAATAATCTTCTaGACCTCTGGAGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQSAIIF*TSGVRP
Trigger: AGGCCTGACTCCAGAGGTTCAGAAGATTATTGCTGA...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATGCTTCTCTTAGAACTTaGACAGATCTCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYASLRT*TDLFRT
Trigger: GGTTCTGAAGAGATCTGTTCAAGTTCTAAGAGAAGC...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTAGTCATTCTTTTCAGTaGAAATGGCAAGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTISHSFQ*KWQAMK
Trigger: TTTCATGGCTTGCCATTTTCACTGAAAAGAATGACT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACATATCAGCCTCAAGTTaGTGGAGCAGGCCCATGTTA +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNISASS*WSRPML
Trigger: TAACATGGGCCTGCTCCAGCAACTTGAGGCTGATAT...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAAATATCAGCCTCAAGTTaGTGGAGCAGGCCCATGTTA +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQISASS*WSRPML
Trigger: TAACATGGGCCTGCTCCAGCAACTTGAGGCTGATAT...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACCGGTTTCATTTTCACTaGCCTGGTCAACTAATACCA +
Preference number: 4 (lower is better)
Translates to: LFVLSINFLLVSLPLANHRFHFH*PGQLIP
Trigger: TGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCG...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGGGTTTAAAACTGGAATaGCCAAAGTACATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKGLKLE*PKYILR
Trigger: CCTCAAGATGTACTTTGGCCATTCCAGTTTTAAACC...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCACTTTCCACTGAACTaGTTTAAAACTGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYHFPLN*FKTGMA
Trigger: GGCCATTCCAGTTTTAAACCAGTTCAGTGGAAAGTG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTCCAAGGAAGCAAGCTaGGATGTTGGACATTTTAAG +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYSKEAS*DVGHFK
Trigger: CTTAAAATGTCCAACATCCCAGCTTGCTTCCTTGGA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGCCTTCAAATTCCCAGTaGGAACTTGTTTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKPSNSQ*ELVLTR
Trigger: TCTTGTCAAAACAAGTTCCCACTGGGAATTTGAAGG...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCAGAAGCAACTTCTTTaGACACAATTCTTCATTAGC +
Preference number: 4 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIQKQLL*TQFFIS
Trigger: GCTAATGAAGAATTGTGTCCAAAGAAGTTGCTTCTG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CCA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGGTTTTCAACCGTAGTTaGTCTCATTTTGGCCATATC +
Preference number: 4 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKVFNRS*SHFGHI
Trigger: GATATGGCCAAAATGAGACCAACTACGGTTGAAAAC...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 72 bp AGAGGAAATTTACTCCAATTGCTACAGCGGATAGACTaGTCTTTCAGGAGCTGTTTACCTAAGAGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: RGNLLQLLQRID*SFRSCLPKRCL
Trigger: TAAACACCTCTTAGGTAAACAGCTCCTGAAAGACAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 72 bp GTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTaGGCAAACCACACAGGTAATCGTCTCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VLSINFLLVSLP*ANHTGNRLFLS
Trigger: AGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTCATGTTTAGCTAAATaGTCAAGTGTTGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYSCLAK*SSVGSH
Trigger: ATGGGACCCAACACTTGATCATTTAGCTAAACATGA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGCTAAGATATTCTTCCTaGGACTGCTGTTCCAAAATT +
Preference number: 4 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKLRYSS*DCCSKI
Trigger: AATTTTGGAACAGCAGTCTCAGGAAGAATATCTTAG...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp ATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTGAATTTCATCTCTCCAGTACAGGTGATCTaGGGATTTCTCAGATTTAAG +
Preference number: 4 (lower is better)
Translates to: INAHSKSYGSYDTLNFISPVQVI*GFLRFK
Trigger: CTTAAATCTGAGAAATCCTCAGATCACCTGTACTGG...AGAGATGAAATTCAGTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATAATCTCCTGATAATATaGTTCCATGTCCTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYNLLII*FHVLRS
Trigger: GCTCCTAAGGACATGGAATCATATTATCAGGAGATT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTTGAGGTTTTGTACTTaGAAAGAGGTCTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LFVLSINFLLVSLPLANHLRFCT*KEVCLN
Trigger: GTTCAGACAGACCTCTTTTCAAGTACAAAACCTCAA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACGGCGGGAGGACTGCTTaGAAGAAAGAAAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNGGRTA*KKEKEK
Trigger: TTTCTCTTTTTCTTTCTTTCAAGCAGTCCTCCCGCC...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACTTGCTCTTCATTGGGTaGTGGCCACAAAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNLLFIG*WPQKVL
Trigger: AAGGACTTTTTGTGGCCAGCACCCAATGAAGAGCAA...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACTGCAGTAGCAGTAAGTaGAACGATTGGAACCATTGG +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNCSSSK*NDWNHW
Trigger: CCAATGGTTCCAATCGTTGCACTTACTGCTACTGCA...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTGATCCAATCTGGACCTaGAATTATCACAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPDPIWT*NYHSIF
Trigger: AAAAATGCTGTGATAATTGCAGGTCCAGATTGGATC...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACTTTGATCCTTGCCAGTaGCAAATAAACTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNFDPCQ*QINCAC
Trigger: GCAGGCACAGTTTATTTGGCACTGGCAAGGATCAAA...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAATTTGATCCTTGCCAGTaGCAAATAAACTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQFDPCQ*QINCAC
Trigger: GCAGGCACAGTTTATTTGGCACTGGCAAGGATCAAA...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp GCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACATACAAAATATACACTTaGCTAGTGCAATTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ANVSFINAHSKSYGSYDTYKIYT*LVQLVS
Trigger: GGAGACCAATTGCACTAGGCAAGTGTATATTTTGTA...TGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATATATTCACAGGGTATTaGAGATGCACACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYIFTGY*RCTHKS
Trigger: GCTTTTGTGTGTGCATCTGCAATACCCTGTGAATAT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATGGTTTAAAACTGGAATaGCCAAAGTACATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYGLKLE*PKYILR
Trigger: CCTCAAGATGTACTTTGGCCATTCCAGTTTTAAACC...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCCTTCAAATTCCCAGTaGGAACTTGTTTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYPSNSQ*ELVLTR
Trigger: TCTTGTCAAAACAAGTTCCCACTGGGAATTTGAAGG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTCAGAAGCAACTTCTTTaGACACAATTCTTCATTAGC +
Preference number: 4 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPQKQLL*TQFFIS
Trigger: GCTAATGAAGAATTGTGTCCAAAGAAGTTGCTTCTG...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTGTTGCCAGAATAGCTaGGGGAACATCCATTTTATT +
Preference number: 4 (lower is better)
Translates to: LFVLSINFLLVSLPLANHCCQNS*GNIHFI
Trigger: AATAAAATGGATGTTCCCCCAGCTATTCTGGCAACA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATGCACAGGCACGTAGTTaGAAAAGAGAAGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYAQARS*KREEYF
Trigger: AAAATACTCTTCTCTTTTCCAACTACGTGCCTGTGC...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
3UTR CAA 72 bp AGATCCATCACTTCCTCAGAGATTGAAGTCAACTGTTaGTTCATGTCGCTAAGTAGGATTTCTTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RSITSSEIEVNC*FMSLSRISSSL
Trigger: TAAAGAGGAAGAAATCCTACTTAGCGACATGAACAAACAGTTGACTTCAATCTCTGAGGAAGTGATGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 72 bp CTACCCTTTTTCGTAAGGGCGCAAATCTTCATAAATTaGTTATACCGAGAAACTTCTACCAAGAATCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPFFVRAQIFIN*LYRETSTKNPS
Trigger: TGAGGGATTCTTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAAAAGGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
3UTR CAA 72 bp CAGAAGCAACTTCTTTGGACACAATTCTTCATTAGCTaGAAGGATGAGGCTCTGAGATTCTGTATTAGCTTT +
Preference number: 4 (lower is better)
Translates to: QKQLLWTQFFIS*KDEALRFCISF
Trigger: AAAGCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCAAAGAAGTTGCTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAACAAAACCAGTACAGGTaGTCTGAGGATTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQQNQYR*SEDFSD
Trigger: ATCTGAGAAATCCTCAGATCACCTGTACTGGTTTTG...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACAATGGCTGCAGATCCTaGAGGATATTCCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNNGCRS*RIFPVF
Trigger: AAAAACAGGGAATATCCTTCAGGATCTGCAGCCATT...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACGTAGCTATGACACACTaGATTTCATCTCTTACAAAC +
Preference number: 4 (lower is better)
Translates to: LFVLSINFLLVSLPLANHVAMTH*ISSLTN
Trigger: GTTTGTAAGAGATGAAATTCAGTGTGTCATAGCTAC...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATGATGGCCATAGACTGTaGAAGTGTGCATATTTTATT +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYDGHRL*KCAYFI
Trigger: AATAAAATATGCACACTTTCACAGTCTATGGCCATC...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAAATGAAGTCTCAGTATTaGTGCCTACTTCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQMKSQY*CLLLPC
Trigger: GCAAGGAAGAAGTAGGCATCAATACTGAGACTTCAT...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp TGGACACAATTCTTCATTAGCTTGAAGGATGAGGCTCTGAGATTCTGTATTAGCTCATTGGGAGATAAATaGTTAAGCATCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: WTQFFISLKDEALRFCISSLGDK*LSISIS
Trigger: AGAAATGGAGATGCTTAAGCATTTATCTCCCAATGA...GCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCAAATAAACTGTGCCTaGGATATTGATCGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNQINCA*DIDRQD
Trigger: GTCTTGCCGATCAATATCGCAGGCACAGTTTATTTG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAAAACAATGCTCTTTGGTaGCCGAAGATACAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQNNALW*PKIQFS
Trigger: CGAAAACTGTATCTTCGGGCACCAAAGAGCATTGTT...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp ATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTGAATTTCATCTCTGATAGAAACCCTCCGTaGGTTTTCCAATTTACTGAA +
Preference number: 4 (lower is better)
Translates to: INAHSKSYGSYDTLNFISDRNPP*VFQFTE
Trigger: TTCAGTAAATTGGAAAACCCACGGAGGGTTTCTATC...AGAGATGAAATTCAGTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACTTAAGCTGTAGCACTTaGTCTTCCATCAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: LFVLSINFLLVSLPLANHLSCST*SSIREI
Trigger: TATTTCTCTGATGGAAGACCAAGTGCTACAGCTTAA...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CCA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTCAAAGGCTTTGAAATaGATGGTGAACTGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: VKESCQASSGGTQLFQNYSKALK*MVNCLK
Trigger: CTTTAAGCAGTTCACCATCCATTTCAAAGCCTTTGA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCAAATGCAGAAGCCATaGCTGGACAACAACATATCA +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNQMQKP*LDNNIS
Trigger: TGATATGTTGTTGTCCAGCCATGGCTTCTGCATTTG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACTCAGAAACACACAACTaGATTAGTGCAACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNSETHN*ISATLP
Trigger: TGGCAAAGTTGCACTAATTCAGTTGTGTGTTTCTGA...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp TTTCGTAAGGGCGCAAATCTTCATAAATTTGTTATACCGAGAAACTTCTACCAAAATCTCCTGATAATATaGTTCCATGTCCTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: FRKGANLHKFVIPRNFYQNLLII*FHVLRS
Trigger: GCTCCTAAGGACATGGAATCATATTATCAGGAGATT...TTGGTAGAAGTTTCTCGGTATAACAAATTTATGAAGATTTGCGCCCTTACGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCAAAATGAGACAAGATaGTTTGTCTCCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNQNETR*FVSYIC
Trigger: GCAGATGTAGGAGACAAATCATCTTGTCTCATTTTG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACTTGAGGTTTTGTACTTaGAAAGAGGTCTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNLRFCT*KEVCLN
Trigger: GTTCAGACAGACCTCTTTTCAAGTACAAAACCTCAA...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACGTTTTCAACCGTAGTTaGTCTCATTTTGGCCATATC +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNVFNRS*SHFGHI
Trigger: GATATGGCCAAAATGAGACCAACTACGGTTGAAAAC...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR TCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACGTGGACATTGTTCTCTaGAATTTTACCAAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNVDIVL*NFTKKW
Trigger: CCACTTTTTGGTAAAATTTCAGAGAACAATGTCCAC...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACAGTTTAAATTATTGCTaGGCCTCAGTTCAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNSLNYC*ASVQSQ
Trigger: TTGAGACTGAACTGAGGCCCAGCAATAATTTAAACT...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR GCA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACTCATTGGGAGATAAATaGTTAAGCATCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNSLGDK*LSISIS
Trigger: AGAAATGGAGATGCTTAAGCATTTATCTCCCAATGA...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS TCA 90 bp AGAAAACCCGAGAAGATCCAGTCCAACAGGTCTTCTTCAGCCGGATaGCTGTGGAGCGCCACCACAAGCAGGGCCTGCAACCCAGGCATC +
Preference number: 5 (lower is better)
Translates to: RKPEKIQSNRSSSAG*LWSATTSRACNPGI
Trigger: GATGCCTGGGTTGCAGGCCCTGCTTGTGGTGGCGCTCCACAGTCATCCGGCTGAAGAAGACCTGTTGGACTGGATCTTCTCGGGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCGGGGTTTCACCATGTaGGCCAGGGTGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCRGFTM*ARVVSI
Trigger: GATCGAGACCACCCTGGCCAACATGGTGAAACCCCG...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTAATATCAGCCTCAAGTaGCTGGAGCAGGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCNISLK*LEQAHV
Trigger: AACATGGGCCTGCTCCAGCAACTTGAGGCTGATATT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCAACGATTGGAACCATaGGCAGTGCTGTCTTTAGGG +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCQRLEP*AVLSLG
Trigger: CCCTAAAGACAGCACTGCCAATGGTTCCAATCGTTG...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGCCAACATGGCAGCTTaGCCTTCAGAAACACCATCA +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCANMAA*PSETPS
Trigger: TGATGGTGTTTCTGAAGGCAAAGCTGCCATGTTGGC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCCAAGTTTCCCTCTATaGTATAATGGTGGCCACTCC +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCPSFPL*YNGGHS
Trigger: GGAGTGGCCACCATTATACAATAGAGGGAAACTTGG...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGTAACTTGCTCTTCATaGGGTGCTGGCCACAAAAAG +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDIVTCSS*GAGHKK
Trigger: CTTTTTGTGGCCAGCACCCAATGAAGAGCAAGTTAC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTAGCCAATCAAAGGCTTaGAAATGGATGGTGAACTGC +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCSQSKA*KWMVNC
Trigger: GCAGTTCACCATCCATTTCAAAGCCTTTGATTGGCT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTGGAAATTTACTCCAATaGCTACAGCGGATAGACTTG +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCGNLLQ*LQRIDL
Trigger: CAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCC...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGACTGTGCCTGCGATATaGATCGGCAAGACGCTGAGA +
Preference number: 5 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWTVPAI*IGKTLR
Trigger: TCTCAGCGTCTTGCCGATCAATATCGCAGGCACAGT...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGTAGTTGGTCTCATTTaGGCCATATCCACCAGTATC +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDIVVGLI*AISTSI
Trigger: GATACTGGTGGATATGGCCAAAATGAGACCAACTAC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTTTACTCATATCTGAGTaGACGGGAGGGTTTCGGATA +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDILLISE*TGGFRI
Trigger: TATCCGAAACCCTCCCGTCAACTCAGATATGAGTAA...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTCATTTCAGCTTTTTATaGGCAACATCTGTCAACTCC +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCHFSFL*ATSVNS
Trigger: GGAGTTGACAGATGTTGCCAATAAAAAGCTGAAATG...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTTCACTTCCTCAGAGATaGAAGTCAACTGTTTGTTCA +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCSLPQR*KSTVCS
Trigger: TGAACAAACAGTTGACTTCAATCTCTGAGGAAGTGA...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCAATATCAGCCTCAAGTaGCTGGAGCAGGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: LRNTVSLIHSNERDTNISNISLK*LEQAHV
Trigger: AACATGGGCCTGCTCCAGCAACTTGAGGCTGATATT...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp CTCAGAAATACAGTGAGCCTCATCCACAGCAATGAGCGTGATACCAATATCAGCGACGTGACAAGAACTTaGAAGTCCATCACGACCAGC +
Preference number: 5 (lower is better)
Translates to: LRNTVSLIHSNERDTNISDVTRT*KSITTS
Trigger: GCTGGTCGTGATGGACTTCAAAGTTCTTGTCACGTC...GCTGATATTGGTATCACGCTCATTGCTGTGGATGAGGCTCACTGTATTTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGATATTCACAGGGTATaGCAGATGCACACACAAAAG +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDIDIHRV*QMHTQK
Trigger: CTTTTGTGTGTGCATCTGCAATACCCTGTGAATATC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTTTCATGTTCTCTAATTaGTTTCTGTTGTACTCCCCC +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDIFMFSN*FLLYSP
Trigger: GGGGGAGTACAACAGAAACAAATTAGAGAACATGAA...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGACTTGAGGCAAGTAACTaGCTCTTCATTGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGLEASN*LFIGCW
Trigger: CCAGCACCCAATGAAGAGCAAGTTACTTGCCTCAAG...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp TTCTGGTCCTCAGTGAGAGGAAATTTACTCCAATTGCTACAGCGGATAGACTTGCAACGATTGGAACCATaGGCAGTGCTGTCTTTAGGG +
Preference number: 5 (lower is better)
Translates to: FWSSVRGNLLQLLQRIDLQRLEP*AVLSLG
Trigger: CCCTAAAGACAGCACTGCCAATGGTTCCAATCGTTG...CAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCCTCTCACTGAGGACCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTACCGTAATGAATGACTaGGCGAATGTCAGCTTTATT +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDITVMND*ANVSFI
Trigger: AATAAAGCTGACATTCGCCAAGTCATTCATTACGGT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTGTTCTTCTTGAGGTTTaGTACTTGAAAAGAGGTCTG +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDIVLLEV*YLKRGL
Trigger: CAGACCTCTTTTCAAGTACAAAACCTCAAGAAGAAC...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGCTGGTATCACTTCCTTaGGCAAACCACACAGGTAAT +
Preference number: 5 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVLVSLP*ANHTGN
Trigger: ATTACCTGTGTGGTTTGCCAAAGGAAGTGATACCAG...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AAACAAGTGCTTCTCCTGGAGACAGCCTCGTACCTAGGCATGCAGCAGACGTGTACTTGCCTAGTGCAATaGGTCTCCATTTTACATTTT +
Preference number: 5 (lower is better)
Translates to: KQVLLLETASYLGMQQTCTCLVQ*VSILHF
Trigger: AAAATGTAAAATGGAGACCAATTGCACTAGGCAAGT...ACACGTCTGCTGCATGCCTAGGTACGAGGCTGTCTCCAGGAGAAGCACTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCCACCAACTCTCTGTTaGATCCTTGCCAGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIPPTLC*ILASAK
Trigger: TTTGGCACTGGCAAGGATCAAACAGAGAGTTGGTGG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGGTAGTTGGTCTCATTTaGGCCATATCCACCAGTATC +
Preference number: 5 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWVVGLI*AISTSI
Trigger: GATACTGGTGGATATGGCCAAAATGAGACCAACTAC...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGGATGAAGTCTCAGTATaGATGCCTACTTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVDEVSV*MPTSSL
Trigger: CAAGGAAGAAGTAGGCATCAATACTGAGACTTCATC...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AGGCATGCAGCAGACGTGTCTGTGCGTACTTGCCACTCCATCACACAGGATATTATACAAAATATACACTaGCCTAGTGCAATTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RHAADVSVRTCHSITQDIIQNIH*PSAIGL
Trigger: GAGACCAATTGCACTAGGCAAGTGTATATTTTGTAT...AATATCCTGTGTGATGGAGTGGCAAGTACGCACAGACACGTCTGCTGCATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTACTACAGCGGATAGACTaGTCTTTCAGGAGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: LANHTGNRLFLSADEVSVLQRID*SFRSCL
Trigger: TAAACAGCTCCTGAAAGACAAGTCTATCCGCTGTAG...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGTCACTTCCTCAGAGATaGAAGTCAACTGTTTGTTCA +
Preference number: 5 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVSLPQR*KSTVCS
Trigger: TGAACAAACAGTTGACTTCAATCTCTGAGGAAGTGA...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGCTAAATGATCAAGTGTaGGGTCCCATGTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVLNDQV*GPMFHL
Trigger: AAGATGAAACATGGGACCCAACACTTGATCATTTAG...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTGTAACTTGCTCTTCATaGGGTGCTGGCCACAAAAAG +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIVTCSS*GAGHKK
Trigger: CTTTTTGTGGCCAGCACCCAATGAAGAGCAAGTTAC...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGACAGTGGGAACTTGTTTaGACAAGAAATGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGQWELV*TRNGCR
Trigger: TCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACTG...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATACTGTGCCTGCGATATaGATCGGCAAGACGCTGAGA +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYTVPAI*IGKTLR
Trigger: TCTCAGCGTCTTGCCGATCAATATCGCAGGCACAGT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AGTCCCAGGATGTATCCTCTGAGTCATCCATGGAATAGCAATGATCCAATCTGGCATTTCAGCTTTTTATaGGCAACATCTGTCAACTCC +
Preference number: 5 (lower is better)
Translates to: SPRMYPLSHPWNSNDPIWHFSFL*ATSVNS
Trigger: GGAGTTGACAGATGTTGCCAATAAAAAGCTGAAATG...CCAGATTGGATCATTGCTATTCCATGGATGACTCAGAGGATACATCCTGGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCTACAGCGGATAGACTaGTCTTTCAGGAGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILQRID*SFRSCL
Trigger: TAAACAGCTCCTGAAAGACAAGTCTATCCGCTGTAG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGTCTACCGTGCCACTATaGAGGTTTTCTAAAGACTTA +
Preference number: 5 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWSTVPL*RFSKDL
Trigger: TAAGTCTTTAGAAAACCTCAATAGTGGCACGGTAGA...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCTTGAGGCAAGTAACTaGCTCTTCATTGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYLEASN*LFIGCW
Trigger: CCAGCACCCAATGAAGAGCAAGTTACTTGCCTCAAG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTAAGCAAGCTGGGATGTaGGACATTTTAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIKQAGM*DILSCS
Trigger: GCTACAGCTTAAAATGTCCAACATCCCAGCTTGCTT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATGACGTGACAAGAACTTaGAAGTCCATCACGACCAGC +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYDVTRT*KSITTS
Trigger: GCTGGTCGTGATGGACTTCAAAGTTCTTGTCACGTC...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp CCGCTGTCAGGACCATGTTTAAGGATCTCAATTGCCATGTGGATAAGGTACGTGCTCGGAGAAATAAAATaGGAAGCCCAATTCCAAATT +
Preference number: 5 (lower is better)
Translates to: PLSGPCLRISIAMWIRYVLGEIK*EAQFQI
Trigger: AATTTGGAATTGGGCTTCCAATTTTATTTCTCCGAG...CACGTACCTTATCCACATGGCAATTGAGATCCTTAAACATGGTCCTGACAGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTGTTTGGCAGAAATGTTaGATGACTTCCAACAGAGGG +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIVWQKC*MTSNRG
Trigger: CCCTCTGTTGGAAGTCATCAAACATTTCTGCCAAAC...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCTGGTATCACTTCCTTaGGCAAACCACACAGGTAAT +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILVSLP*ANHTGN
Trigger: ATTACCTGTGTGGTTTGCCAAAGGAAGTGATACCAG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCACAACAAATACCAGTaGTTTTCCGTGAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIHNKYQ*FSVKRP
Trigger: TGGCCTCTTCACGGAAAACAACTGGTATTTGTTGTG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp ATGAATGTCTTTCCTTGTGCTAAAACTCATGCCCGCATGGTATGTTCCACAGGATTCATGTTCTCTAATTaGTTTCTGTTGTACTCCCCC +
Preference number: 5 (lower is better)
Translates to: MNVFPCAKTHARMVCSTGFMFSN*FLLYSP
Trigger: GGGGGAGTACAACAGAAACAAATTAGAGAACATGAA...TCCTGTGGAACATACCATGCGGGCATGAGTTTTAGCACAAGGAAAGACATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTACTTCTAAATACAGGTTaGGTCGATCAAAACCAGTAC +
Preference number: 5 (lower is better)
Translates to: LANHTGNRLFLSADEVSVLLNTG*VDQNQY
Trigger: GTACTGGTTTTGATCGACCAAACCTGTATTTAGAAG...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp CTCTTTGGTGCCCGAAGATACAGTTTTCGAACTAGGCAGAAGCAACTTCTTTGGTTCACCTGTAACTTGTaGTGTCATTTTTCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: LFGARRYSFRTRQKQLLWFTCNL*CHFSRR
Trigger: CCTTCTAGAAAAATGACACAACAAGTTACAGGTGAA...CCAAAGAAGTTGCTTCTGCCTAGTTCGAAAACTGTATCTTCGGGCACCAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTAATGAGACAAGATGATTaGTCTCCTACATCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: LANHTGNRLFLSADEVSVMRQDD*SPTSAR
Trigger: TCTAGCAGATGTAGGAGACAAATCATCTTGTCTCAT...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp ATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTGAATTTCATCTCTCCACCAACTCTCTGTTaGATCCTTGCCAGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: INAHSKSYGSYDTLNFISPPTLC*ILASAK
Trigger: TTTGGCACTGGCAAGGATCAAACAGAGAGTTGGTGG...AGAGATGAAATTCAGTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp TTGGCAAACCACACAGGTAATCGTCTCTTTCTCTCTGCAGATGAAGTCTCAGTAATATCCACCAGTATCTaGTTTGTTGCCAGAATAGCT +
Preference number: 5 (lower is better)
Translates to: LANHTGNRLFLSADEVSVISTSI*FVARIA
Trigger: AGCTATTCTGGCAACAAACAAGATACTGGTGGATAT...TACTGAGACTTCATCTGCAGAGAGAAAGAGACGATTACCTGTGTGGTTTGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp ATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTGAATTTCATCTCTGCCAACATGGCAGCTTaGCCTTCAGAAACACCATCA +
Preference number: 5 (lower is better)
Translates to: INAHSKSYGSYDTLNFISANMAA*PSETPS
Trigger: TGATGGTGTTTCTGAAGGCAAAGCTGCCATGTTGGC...AGAGATGAAATTCAGTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGGTTTGGCAGAAATGTTaGATGACTTCCAACAGAGGG +
Preference number: 5 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKVWQKC*MTSNRG
Trigger: CCCTCTGTTGGAAGTCATCAAACATTTCTGCCAAAC...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp TGGACACAATTCTTCATTAGCTTGAAGGATGAGGCTCTGAGATTCTGTATTAGCTTACTCATATCTGAGTaGACGGGAGGGTTTCGGATA +
Preference number: 5 (lower is better)
Translates to: WTQFFISLKDEALRFCISLLISE*TGGFRI
Trigger: TATCCGAAACCCTCCCGTCAACTCAGATATGAGTAA...GCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTGGAAATTTACTCCAATaGCTACAGCGGATAGACTTG +
Preference number: 5 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPGNLLQ*LQRIDL
Trigger: CAAGTCTATCCGCTGTAGCAATTGGAGTAAATTTCC...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTTCTACCGTGCCACTATaGAGGTTTTCTAAAGACTTA +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTISTVPL*RFSKDL
Trigger: TAAGTCTTTAGAAAACCTCAATAGTGGCACGGTAGA...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCAGTGGGAACTTGTTTaGACAAGAAATGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYQWELV*TRNGCR
Trigger: TCTGCAGCCATTTCTTGTCAAAACAAGTTCCCACTG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACTCCCAAGGAGGCTTTTaGTACTTGTTTGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHSQGGF*YLFVLK
Trigger: TTTGAGGACAAACAAGTACAAAAAGCCTCCTTGGGA...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp TCCAATCTGGACCTGCAATTATCACAGCATTTTTCAGTTCCCATAATTCCCAAGCAATTCTTCATTAGCTaGAAGGATGAGGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SNLDLQLSQHFSVPIIPKQFFIS*KDEALR
Trigger: TCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTG...CTTGGGAATTATGGGAACTGAAAAATGCTGTGATAATTGCAGGTCCAGATTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTATATCCACCAGTATCTaGTTTGTTGCCAGAATAGCT +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIISTSI*FVARIA
Trigger: AGCTATTCTGGCAACAAACAAGATACTGGTGGATAT...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCTTGAGGTTTTGTACTaGAAAAGAGGTCTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILEVLY*KRGLSE
Trigger: TTCAGACAGACCTCTTTTCAAGTACAAAACCTCAAG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTTTCACCTGTAACTTGTaGTGTCATTTTTCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTIFTCNL*CHFSRR
Trigger: CCTTCTAGAAAAATGACACAACAAGTTACAGGTGAA...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp GCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACAACCGTAATGAATGACTaGGCGAATGTCAGCTTTATT +
Preference number: 5 (lower is better)
Translates to: ANVSFINAHSKSYGSYDTTVMND*ANVSFI
Trigger: AATAAAGCTGACATTCGCCAAGTCATTCATTACGGT...TGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATTCCCAAGGAGGCTTTTaGTACTTGTTTGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYSQGGF*YLFVLK
Trigger: TTTGAGGACAAACAAGTACAAAAAGCCTCCTTGGGA...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTCTCGGAGAAATAAAATaGGAAGCCCAATTCCAAATT +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILGEIK*EAQFQI
Trigger: AATTTGGAATTGGGCTTCCAATTTTATTTCTCCGAG...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCAATTCTTCATTAGCTaGAAGGATGAGGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYQFFIS*KDEALR
Trigger: TCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp TGGACACAATTCTTCATTAGCTTGAAGGATGAGGCTCTGAGATTCTGTATTAGCCTTGAGGTTTTGTACTaGAAAAGAGGTCTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: WTQFFISLKDEALRFCISLEVLY*KRGLSE
Trigger: TTCAGACAGACCTCTTTTCAAGTACAAAACCTCAAG...GCTAATACAGAATCTCAGAGCCTCATCCTTCAAGCTAATGAAGAATTGTGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp CGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATGGTAGCTATGACACACGTTCTTCTTGAGGTTTaGTACTTGAAAAGAGGTCTG +
Preference number: 5 (lower is better)
Translates to: RMSALLMPIPKAMVAMTHVLLEV*YLKRGL
Trigger: CAGACCTCTTTTCAAGTACAAAACCTCAAGAAGAAC...GTGTGTCATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTGGAAAACATCTCCTTTaGTTGACATCACATGAAGGT +
Preference number: 5 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPGKHLL*LTSHEG
Trigger: ACCTTCATGTGATGTCAACAAAAGGAGATGTTTTCC...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATGATGAAGTCTCAGTATaGATGCCTACTTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYDEVSV*MPTSSL
Trigger: CAAGGAAGAAGTAGGCATCAATACTGAGACTTCATC...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp AATGGCACCCAAAATGCGGTTTCATTTTCACTGCCCTGGTCAACTAATACCATTTTGTCCATTAATTTCTaGCTGGTATCACTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: NGTQNAVSFSLPWSTNTILSINF*LVSLPL
Trigger: CAAAGGAAGTGATACCAGCAAGAAATTAATGGACAA...AATGGTATTAGTTGACCAGGGCAGTGAAAATGAAACCGCATTTTGGGTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATATTGAAGTCAACTGTTaGTTCATGTCGCTAAGTAGG +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYIEVNC*FMSLSR
Trigger: CCTACTTAGCGACATGAACAAACAGTTGACTTCAAT...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACATTGAAGTCAACTGTTaGTTCATGTCGCTAAGTAGG +
Preference number: 5 (lower is better)
Translates to: LFVLSINFLLVSLPLANHIEVNC*FMSLSR
Trigger: CCTACTTAGCGACATGAACAAACAGTTGACTTCAAT...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTTTGTCCATTAATTTCTaGCTGGTATCACTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPLSINF*LVSLPL
Trigger: CAAAGGAAGTGATACCAGCAAGAAATTAATGGACAA...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp ATTATTGCTGGGCCTCAGTTCAGTCTCAATGTTAGTAGACCCAATTATCATCCTACTTGCCTAGTGCAATaGGTCTCCATTTTACATTTT +
Preference number: 5 (lower is better)
Translates to: IIAGPQFSLNVSRPNYHPTCLVQ*VSILHF
Trigger: AAAATGTAAAATGGAGACCAATTGCACTAGGCAAGT...AGGATGATAATTGGGTCTACTAACATTGAGACTGAACTGAGGCCCAGCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp CTTTTCGTTTTGTCCATTAATTTCTTGCTGGTATCACTTCCTTTGGCAAACCACATACAAAATATACACTaGCCTAGTGCAATTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LFVLSINFLLVSLPLANHIQNIH*PSAIGL
Trigger: GAGACCAATTGCACTAGGCAAGTGTATATTTTGTAT...GTGGTTTGCCAAAGGAAGTGATACCAGCAAGAAATTAATGGACAAAACGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650667.1
CDS-3UTR CAA 90 bp GTTAAGGAAAGCTGTCAAGCTTCCAGTGGAGGAACACAACTTTTCCAAAATTATCTGAGAACAGCAGCATaGTTTACATTTTGCAAATCT +
Preference number: 5 (lower is better)
Translates to: VKESCQASSGGTQLFQNYLRTAA*FTFCKS
Trigger: AGATTTGCAAAATGTAAACAATGCTGCTGTTCTCAG...ATAATTTTGGAAAAGTTGTGTTCCTCCACTGGAAGCTTGACAGCTTTCCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCTAAATGATCAAGTGTaGGGTCCCATGTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNLNDQV*GPMFHL
Trigger: AAGATGAAACATGGGACCCAACACTTGATCATTTAG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACCTTCTAAATACAGGTTaGGTCGATCAAAACCAGTAC +
Preference number: 5 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNLLNTG*VDQNQY
Trigger: GTACTGGTTTTGATCGACCAAACCTGTATTTAGAAG...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACATGAGACAAGATGATTaGTCTCCTACATCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNMRQDD*SPTSAR
Trigger: TCTAGCAGATGTAGGAGACAAATCATCTTGTCTCAT...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS-3UTR CAA 90 bp GCTTTGAAATGGATGGTGAACTGCTTAAAGTTAAATAATCATCGTTTACCCAACGGAAAACATCTCCTTTaGTTGACATCACATGAAGGT +
Preference number: 5 (lower is better)
Translates to: ALKWMVNCLKLNNHRLPNGKHLL*LTSHEG
Trigger: ACCTTCATGTGATGTCAACAAAAGGAGATGTTTTCC...GTTGGGTAAACGATGATTATTTAACTTTAAGCAGTTCACCATCCATTTCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS TCA 72 bp GAGAAGATCCAGTCCAACAGGTCTTCTTCAGCCGGATaGCTGTGGAGCGCCACCACAAGCAGGGCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: EKIQSNRSSSAG*LWSATTSRACN
Trigger: GTTGCAGGCCCTGCTTGTGGTGGCGCTCCACAGTCATCCGGCTGAAGAAGACCTGTTGGACTGGATCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298139.7
ENST00000650667.1
CDS GCA 72 bp TGCTCTCAGAAACACACAACTGAATTAGTGCAACTTTaGCAAGTTTCCCTCTATTGTATAATGGTGGCCACT +
Preference number: 6 (lower is better)
Translates to: CSQKHTTELVQL*QVSLYCIMVAT
Trigger: AGTGGCCACCATTATACAATAGAGGGAAACTTGGCAAAGTTGCACTAATTCAGTTGTGTGTTTCTGAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298139.7
CDS CCA 72 bp AGAGATAACAAGGCCAATCTTGCCTACATAAACAGGTaGATACTGGAAGCACAAACTCTTTCCATATCGGTT +
Preference number: 6 (lower is better)
Translates to: RDNKANLAYINR*ILEAQTLSISV
Trigger: AACCGATATGGAAAGAGTTTGTGCTTCCAGTATCCACCTGTTTATGTAGGCAAGATTGGCCTTGTTATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521620.5
CDS TCA 72 bp ACAGATTATCTGCCTGATTTACAGATTAAGGACTGGTaGCTAGAAATGGGATTTCTGTTCACTCTCTATAAA +
Preference number: 6 (lower is better)
Translates to: TDYLPDLQIKDW*LEMGFLFTLYK
Trigger: TTTATAGAGAGTGAACAGAAATCCCATTTCTAGTCACCAGTCCTTAATCTGTAAATCAGGCAGATAATCTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520169.1