RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT8A (Homo sapiens)

Ensembl gene IDs: ENSG00000061492

Ensembl transcript IDs: ENST00000361560.6, ENST00000398754.1, ENST00000504809.5, ENST00000506684.6

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTTTGCTTCTATTCTCCTaGTTCCCAGCAGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: CQSQEAQVPISAPPGICCLLLFS*FPAAQL
Trigger: CAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCAA...ACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR TCA 90 bp TGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAATTGCTTCTATTCTCCTaGTTCCCAGCAGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: CFYSPDSQQHSWVGHGLKLLLFS*FPAAQL
Trigger: CAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCAA...TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR CCA 90 bp GACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACAAAGATTCCCAGCAGCACAGCTaGGTTGGACATGGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: DPKPNSPCRKLHKYRHKDSQQHS*VGHGLK
Trigger: TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGA...ATCTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR CCA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGATCCCAGCAGCACAGCTaGGTTGGACATGGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRSQQHS*VGHGLK
Trigger: TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGA...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR CCA 90 bp TTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATATGCTGTAGAATCTTaGGCCTCCATTTTCCCCACT +
Preference number: 2 (lower is better)
Translates to: FAGKMKWGSAKVRRPRFQYAVES*ASIFPT
Trigger: AGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATA...TTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR TCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATTTGCTTCTATTCTCCTaGTTCCCAGCAGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: QEYAVESWASIFPTDSRYLLLFS*FPAAQL
Trigger: CAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCAA...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR GCA 90 bp GTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAACTACAGACCAAAACTaGAATTTTCCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: VCRKDEMGVCQSQEAQVPTTDQN*NFPIAF
Trigger: GAAAGCAATCGGAAAATTGCAGTTTTGGTCTGTAGT...TGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR TCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGTTTGCAGGAAAGATaGAATGGGGGTCTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYSLQER*NGGLPK
Trigger: CTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACT...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR GCA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACGATGGGAAAGTAGTTTaGAGGAAAGATGAAATGGGG +
Preference number: 2 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHDGKVV*RKDEMG
Trigger: CCCCATTTCATCTTTCCTGCAAACTACTTTCCCATC...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR GCA 90 bp GACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACAAAGATCTGCAATTTTCCGATTaGTTTCCAATCTGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: DPKPNSPCRKLHKYRHKDLQFSD*FPICSL
Trigger: GAGAGAACAGATTGGAAAGCAATCGGAAAATTGCAG...ATCTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR TCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATTGCTCTTCAGAAGTCTaGACAGAACTCTTTCGTTTT +
Preference number: 2 (lower is better)
Translates to: QEYAVESWASIFPTDSRYCSSEV*TELFRF
Trigger: AAAACGAAAGAGTTCTGTTCAGACTTCTGAAGAGCA...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR TCA 90 bp AATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTTTTACCTGCCAAACACTaGAATCAAGGGAGTTGCATA +
Preference number: 2 (lower is better)
Translates to: NSGSLYCFPVDQCLGLNFLPAKH*NQGSCI
Trigger: TATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAA...AAAATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361560.6
3UTR-3UTR GCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACACTACAGACCAAAACTaGAATTTTCCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYTTDQN*NFPIAF
Trigger: GAAAGCAATCGGAAAATTGCAGTTTTGGTCTGTAGT...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR TCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCTGCTCTTCAGAAGTCTaGACAGAACTCTTTCGTTTT +
Preference number: 2 (lower is better)
Translates to: FVTCQTLKSRELHISSFSCSSEV*TELFRF
Trigger: AAAACGAAAGAGTTCTGTTCAGACTTCTGAAGAGCA...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
3UTR-3UTR GCA 90 bp AAATTTAAAGGAACAAATACTTTGAAGGTCCCTCTAGATATAGACCCCAAACCACTCCCTGTAGAAAGCTaGATAAGTACAGGCACAAAG +
Preference number: 2 (lower is better)
Translates to: KFKGTNTLKVPLDIDPKPLPVES*ISTGTK
Trigger: CTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAG...TGGTTTGGGGTCTATATCTAGAGGGACCTTCAAAGTATTTGTTCCTTTAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR TCA 72 bp CAGGCACAAAGATGGGAAAGTAGTTTGCAGGAAAGATaGAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: QAQRWESSLQER*NGGLPKSGGPG
Trigger: ACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTACTTTCCCATCTTTGTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR GCA 72 bp GGGAAAGTAGTTTGCAGGAAAGATGAAATGGGGGTCTaGCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCC +
Preference number: 3 (lower is better)
Translates to: GKVVCRKDEMGV*QSQEAQVPISA
Trigger: GGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTACTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR GCA 72 bp CTGCATAAGTACAGGCACAAAGATGGGAAAGTAGTTTaGAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAG +
Preference number: 3 (lower is better)
Translates to: LHKYRHKDGKVV*RKDEMGVCQSQ
Trigger: CTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTACTTTCCCATCTTTGTGCCTGTACTTATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR CCA 72 bp TTTTGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTaGGTTGGACATGGTCTGAAATTTAAAGGAACAAAT +
Preference number: 3 (lower is better)
Translates to: FCFYSPDSQQHS*VGHGLKFKGTN
Trigger: ATTTGTTCCTTTAAATTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
3UTR-3UTR CAA 90 bp AATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTTCTGAAATCAAGGGAGTaGCATATTTCTAGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: NSGSLYCFPVDQCLGLNFLKSRE*HISSFS
Trigger: GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAG...AAAATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
3UTR GCA 72 bp CTGATAGCAGATATCATGAGGACTACAGACCAAAACTaGAATTTTCCGATTGCTTTCCAATCTGTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: LIADIMRTTDQN*NFPIAFQSVLS
Trigger: AGAGAGAACAGATTGGAAAGCAATCGGAAAATTGCAGTTTTGGTCTGTAGTCCTCATGATATCTGCTATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
3UTR CCA 72 bp GGGAGTTGCATATTTCTAGTTTCTCCTTTATCCTGGTaGATTATTGGGATACAGAAGAAGGGTTTCTTATTC +
Preference number: 3 (lower is better)
Translates to: GSCIFLVSPLSW*IIGIQKKGFLF
Trigger: GAATAAGAAACCCTTCTTCTGTATCCCAATAATCCACCAGGATAAAGGAGAAACTAGAAATATGCAACTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAACCCTGCCTACCCCAGTaGACCAGGTCCAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQEPCLPQ*TRSSSG
Trigger: CCCTGAGCTGGACCTGGTCCACTGGGGTAGGCAGGG...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS-3UTR GCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATCCAGGGACTGGGCACTaGCTGGGGAGCGTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYPGTGH*LGSVRS
Trigger: ACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGG...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAAACTCACGACCCTCTGTaGCATAGATGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQETHDPL*HRCPGW
Trigger: CCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGT...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAAATGCAGCACAGCATATaGCCAGAGCTGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQEMQHSI*PELPRA
Trigger: TGCTCTGGGCAGCTCTGGGCATATGCTGTGCTGCAT...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATTCCTCTCTTCCACCTaGAGCCCACACTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQEFLSST*SPHSVH
Trigger: GTGCACTGAGTGTGGGCTGCAGGTGGAAGAGAGGAA...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGGACTGGGCACTGCCTaGGGAGCGTGCGCAGTAATA +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYGLGTA*GACAVI
Trigger: TATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCC...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTGGTTCCCCATCGCCCTaGCTACCCCAGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVGSPSP*LPQWTR
Trigger: CCTGGTCCACTGGGGTAGGCAGGGCGATGGGGAACC...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS-3UTR CCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATCCCAGCAGCACAGCTaGGTTGGACATGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQESQQHS*VGHGLK
Trigger: TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGA...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCCTTACCCAGGGACTaGGCACTGCCTGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVPLPRD*ALPGER
Trigger: ACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGG...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATAGAGGTGAATGGGGATaGGACAATGGGGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYRGEWG*DNGGLL
Trigger: AAGGAGGCCCCCATTGTCTCATCCCCATTCACCTCT...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS-3UTR GCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATACTGCCTGGGGAGCGTaGGCAGTAATACTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYTAWGA*AVILAH
Trigger: GTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGT...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTATCCTCGATGCCACTCTaGGCACCCAAGGCCACACTA +
Preference number: 4 (lower is better)
Translates to: AKVRRPRFQFQPRQEYAVSSMPL*APKATL
Trigger: TAGTGTGGCCTTGGGTGCCCAGAGTGGCATCGAGGA...TACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAAATGTCCTTTTCATGGTaGCTCTCACTGCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQEMSFSW*LSLPVC
Trigger: GCAGACTGGCAGTGAGAGCCACCATGAAAAGGACAT...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAACTCCCAGAGATGCCATaGCATTTGCATGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQELPEMP*HLHVLF
Trigger: GAAAAGGACATGCAAATGTCATGGCATCTCTGGGAG...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATTACACTGGTCACACTTaGCCGTACAGCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYYTGHT*PYSTTG
Trigger: TCCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTA...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTACTCTCACTGCCAGTCTaGCGGCCCTGTTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: AKVRRPRFQFQPRQEYAVLSLPV*RPCCCE
Trigger: TTCACAACAACAGGGCCGGCAGACTGGCAGTGAGAG...TACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTAACTGCCTGGGGAGCGTaGGCAGTAATACTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: AKVRRPRFQFQPRQEYAVTAWGA*AVILAH
Trigger: GTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGT...TACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACCCAGGGACTGGGCACTaGCTGGGGAGCGTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHPGTGH*LGSVRS
Trigger: ACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGG...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGATCAGCGGGCACCCAGTaGCCCTCGGCGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRSAGTQ*PSALFP
Trigger: TGGGAACAGCGCCGAGGGCCACTGGGTGCCCGCTGA...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAGATGAAATGGGGGTCTaGCAAAGTCAGGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VCRKDEMGVCQSQEAQVPDEMGV*QSQEAQ
Trigger: CTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATC...TGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAACATAGATGCCCAGGCTaGAATTGCAGGTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQEHRCPG*NCRYSN
Trigger: ATTACTGTACCTGCAATTCCAGCCTGGGCATCTATG...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTTACGTCGCTCCCACCTaGATGTGTTGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CQSQEAQVPISAPPGICCYVAPT*MCCGCS
Trigger: AGAACAGCCACAACACATCCAGGTGGGAGCGACGTA...ACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TACAGGCACAAAGATGGGAAAGTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCCCTTACCCAGGGACTaGGCACTGCCTGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: YRHKDGKVVCRKDEMGVCPLPRD*ALPGER
Trigger: ACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGG...GCAGACCCCCATTTCATCTTTCCTGCAAACTACTTTCCCATCTTTGTGCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAAGATGAAATGGGGGTCTaGCAAAGTCAGGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FAGKMKWGSAKVRRPRFQDEMGV*QSQEAQ
Trigger: CTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATC...TTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp CTGTTCTCTCTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGTCAGCGGGCACCCAGTaGCCCTCGGCGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LFSLREKLCPLPLMQLIKSAGTQ*PSALFP
Trigger: TGGGAACAGCGCCGAGGGCCACTGGGTGCCCGCTGA...CTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAGAGAGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTACACCTGGATGTGTTGTaGCTGTTCTGTAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: AKVRRPRFQFQPRQEYAVHLDVL*LFCRHS
Trigger: TGAGTGCCTACAGAACAGCCACAACACATCCAGGTG...TACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp CTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCAAGGACTGGGCACTGCCTaGGGAGCGTGCGCAGTAATA +
Preference number: 4 (lower is better)
Translates to: LGPPFSPLIADIMRTTDQGLGTA*GACAVI
Trigger: TATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCC...TTGGTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTGCAGGAAAGATGAAATaGGGGTCTGCCAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: CQSQEAQVPISAPPGICCAGKMK*GSAKVR
Trigger: CCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGC...ACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp TTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATACACTGGTCACACTTaGCCGTACAGCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: FAGKMKWGSAKVRRPRFQYTGHT*PYSTTG
Trigger: TCCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTA...TTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAAATGCAGCACAGCATATaGCCAGAGCTGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CFYSPDSQQHSWVGHGLKMQHSI*PELPRA
Trigger: TGCTCTGGGCAGCTCTGGGCATATGCTGTGCTGCAT...TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAAGCCAGCATGTCTGTATaGTGCAGCTCCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: CFYSPDSQQHSWVGHGLKASMSV*CSSQRC
Trigger: GCATCTCTGGGAGCTGCAGCATACAGACATGCTGGC...TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTAGTGCGCAGTAATACTTaGTCACCACATGCCTACACT +
Preference number: 4 (lower is better)
Translates to: AKVRRPRFQFQPRQEYAVVRSNT*SPHAYT
Trigger: AGTGTAGGCATGTGGTGAGCAAGTATTACTGCGCAC...TACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATCTCCCTGTAGAAAGCTaGATAAGTACAGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYLPVES*ISTGTK
Trigger: CTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAG...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATAGGTCAGATAGGCCTTaGGACCTGTTATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYRSDRP*DLLSGN
Trigger: ATTTCCTGATAACAGGTCCCAAGGCCTATCTGACCT...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCCCAGATCCAGCCATaGCCTCCTGTTTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVPQIQP*PPVFPL
Trigger: CAATGGAAAAACAGGAGGCCATGGCTGGATCTGGGG...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTGCGCCTGGTCATACTTaGCCTTTAGGTAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVAPGHT*PLGSLP
Trigger: TGGGAGACTACCTAAAGGCCAAGTATGACCAGGCGC...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTACCGTACAGCACCACTaGAATTTGCAGTTACAGCTG +
Preference number: 4 (lower is better)
Translates to: CQSQEAQVPISAPPGICCTVQHH*NLQLQL
Trigger: CAGCTGTAACTGCAAATTCCAGTGGTGCTGTACGGT...ACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTTCCCAGCAGCACAGCTaGGTTGGACATGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVSQQHS*VGHGLK
Trigger: TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGA...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp TTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTGCTTCTATTCTCCTaGTTCCCAGCAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: FAGKMKWGSAKVRRPRFQLLLFS*FPAAQL
Trigger: CAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCAA...TTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAATTTAAAGGAGCCAGCATGTCTGTATaGTGCAGCTCCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SPDSQQHSWVGHGLKFKGASMSV*CSSQRC
Trigger: GCATCTCTGGGAGCTGCAGCATACAGACATGCTGGC...TCCTTTAAATTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACGATCAGTTCCGCCTCTaGGCTAGGAAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHDQFRL*ARKEGL
Trigger: GAGGCCTTCCTTCCTAGCGCAGAGGCGGAACTGATC...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCAACCTCTGTGCCATAGATaGCCAGGCTGGAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGPPFSPLIADIMRTTDQPLCHR*PGWNCR
Trigger: CCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGG...TTGGTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACACTCACGACCCTCTGTaGCATAGATGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHTHDPL*HRCPGW
Trigger: CCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGT...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCCCAGGGACTGGGCACTaGCTGGGGAGCGTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSPGTGH*LGSVRS
Trigger: ACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGG...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGATGGGAAAGTAGTTTaGAGGAAAGATGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYDGKVV*RKDEMG
Trigger: CCCCATTTCATCTTTCCTGCAAACTACTTTCCCATC...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCTCAGCGGGCACCCAGTaGCCCTCGGCGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSSAGTQ*PSALFP
Trigger: TGGGAACAGCGCCGAGGGCCACTGGGTGCCCGCTGA...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp TTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAACACCTGGATGTGTTGTaGCTGTTCTGTAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: FAGKMKWGSAKVRRPRFQHLDVL*LFCRHS
Trigger: TGAGTGCCTACAGAACAGCCACAACACATCCAGGTG...TTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp AAGGTCCCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATACCAGGCAGAGGCACTaGATGCAGCACAGCATATGC +
Preference number: 4 (lower is better)
Translates to: KVPLDIDPKPNSPCRKLHTRQRH*MQHSIC
Trigger: GCATATGCTGTGCTGCATTCAGTGCCTCTGCCTGGT...ATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGGGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTAGTTTGCAGGAAAGATaGAATGGGGGTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVSLQER*NGGLPK
Trigger: CTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACT...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCGGTTCCCCATCGCCCTaGCTACCCCAGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSGSPSP*LPQWTR
Trigger: CCTGGTCCACTGGGGTAGGCAGGGCGATGGGGAACC...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACGGCAGAGGCACTGAATaGAGCACAGCATATGCCCAG +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDGRGTE*STAYAQ
Trigger: CTGGGCATATGCTGTGCTGCATTCAGTGCCTCTGCC...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AAGGTCCCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATGCCAGCATGTCTGTATaGTGCAGCTCCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: KVPLDIDPKPNSPCRKLHASMSV*CSSQRC
Trigger: GCATCTCTGGGAGCTGCAGCATACAGACATGCTGGC...ATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGGGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCCTCTGTGCCATAGATaGCCAGGCTGGAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDPLCHR*PGWNCR
Trigger: CCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGG...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACGGTATTATCAGGCACTaGCCTTACCCAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHGIIRH*PYPGTG
Trigger: CCCAGTCCCTGGGTAAGGGCAGTGCCTGATAATACC...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCACTCCCTGTAGAAAGCTaGATAAGTACAGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: VCRKDEMGVCQSQEAQVPLPVES*ISTGTK
Trigger: CTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAG...TGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCCCCTGCCTACCCCAGTaGACCAGGTCCAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSPCLPQ*TRSSSG
Trigger: CCCTGAGCTGGACCTGGTCCACTGGGGTAGGCAGGG...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATTCCTCGATGCCACTCTaGGCACCCAAGGCCACACTA +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYSSMPL*APKATL
Trigger: TAGTGTGGCCTTGGGTGCCCAGAGTGGCATCGAGGA...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAATTTAAAGGAGCGCCTGGTCATACTTaGCCTTTAGGTAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPDSQQHSWVGHGLKFKGAPGHT*PLGSLP
Trigger: TGGGAGACTACCTAAAGGCCAAGTATGACCAGGCGC...TCCTTTAAATTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCACTCTCCCCAGGGACTaGGCACTGCCTGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSTLPRD*ALPGER
Trigger: ACGCTCCCCAGGCAGTGCCCAGTCCCTGGGGAGAGT...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATACCAGGCAGAGGCACTaGATGCAGCACAGCATATGC +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYTRQRH*MQHSIC
Trigger: GCATATGCTGTGCTGCATTCAGTGCCTCTGCCTGGT...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp TGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAACTCCCAGAGATGCCATaGCATTTGCATGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: CFYSPDSQQHSWVGHGLKLPEMP*HLHVLF
Trigger: GAAAAGGACATGCAAATGTCATGGCATCTCTGGGAG...TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp AAGGTCCCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATCTCCTTGGCAAGGAGTaGGGGTTGGGAAAGGACTTA +
Preference number: 4 (lower is better)
Translates to: KVPLDIDPKPNSPCRKLHLLGKE*GLGKDL
Trigger: TAAGTCCTTTCCCAACCCTCACTCCTTGCCAAGGAG...ATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGGGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS-3UTR GCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATGGCAGAGGCACTGAATaGAGCACAGCATATGCCCAG +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYGRGTE*STAYAQ
Trigger: CTGGGCATATGCTGTGCTGCATTCAGTGCCTCTGCC...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATATTCCACATTGTCGCTaGAGCCTCCCCAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYIPHCR*SLPRSS
Trigger: GCTGGATCTGGGGAGGCTGCAGCGACAATGTGGAAT...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCTCTCACTGCCAGTCTaGCGGCCCTGTTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYLSLPV*RPCCCE
Trigger: TTCACAACAACAGGGCCGGCAGACTGGCAGTGAGAG...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTACTGCAATTTTCCGATTaGTTTCCAATCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AKVRRPRFQFQPRQEYAVLQFSD*FPICSL
Trigger: GAGAGAACAGATTGGAAAGCAATCGGAAAATTGCAG...TACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATACTACAGACCAAAACTaGAATTTTCCGATTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYTTDQN*NFPIAF
Trigger: GAAAGCAATCGGAAAATTGCAGTTTTGGTCTGTAGT...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCCCCAGATCCAGCCATaGCCTCCTGTTTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDPQIQP*PPVFPL
Trigger: CAATGGAAAAACAGGAGGCCATGGCTGGATCTGGGG...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACAAAGATGCGCCTGGTCATACTTaGCCTTTAGGTAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: DPKPNSPCRKLHKYRHKDAPGHT*PLGSLP
Trigger: TGGGAGACTACCTAAAGGCCAAGTATGACCAGGCGC...ATCTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACTACGTCGCTCCCACCTaGATGTGTTGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDYVAPT*MCCGCS
Trigger: AGAACAGCCACAACACATCCAGGTGGGAGCGACGTA...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACGCATATGCCCAGAGCTaGCCAGAGCATAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDAYAQS*PEHKQV
Trigger: AACCTGTTTATGCTCTGGGCAGCTCTGGGCATATGC...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CTGTTCTCTCTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGATGCAGCACAGCATATaGCCAGAGCTGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LFSLREKLCPLPLMQLIKMQHSI*PELPRA
Trigger: TGCTCTGGGCAGCTCTGGGCATATGCTGTGCTGCAT...CTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAGAGAGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTCTCTCACTGCCAGTCTaGCGGCCCTGTTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LILGVCIVFLLTSVWVSILSLPV*RPCCCE
Trigger: TTCACAACAACAGGGCCGGCAGACTGGCAGTGAGAG...AATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp GACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACAAAGATTGCAGCTCCCAGAGATaGCATGACATTTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: DPKPNSPCRKLHKYRHKDCSSQR*HDICMS
Trigger: GGACATGCAAATGTCATGGCATCTCTGGGAGCTGCA...ATCTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGATGCCCAGGCTGGAATTaGAGGTACAGTAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRCPGWN*RYSNLV
Trigger: CACCAGATTACTGTACCTGCAATTCCAGCCTGGGCA...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTTCCTCTCTTCCACCTaGAGCCCACACTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LILGVCIVFLLTSVWVSIFLSST*SPHSVH
Trigger: GTGCACTGAGTGTGGGCTGCAGGTGGAAGAGAGGAA...AATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp CTGTTCTCTCTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGTTCCTCTCTTCCACCTaGAGCCCACACTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LFSLREKLCPLPLMQLIKFLSST*SPHSVH
Trigger: GTGCACTGAGTGTGGGCTGCAGGTGGAAGAGAGGAA...CTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAGAGAGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CTGTTCTCTCTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGGGTATTATCAGGCACTaGCCTTACCCAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LFSLREKLCPLPLMQLIKGIIRH*PYPGTG
Trigger: CCCAGTCCCTGGGTAAGGGCAGTGCCTGATAATACC...CTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAGAGAGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp AATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTTTCCTCGATGCCACTCTaGGCACCCAAGGCCACACTA +
Preference number: 4 (lower is better)
Translates to: NSGSLYCFPVDQCLGLNFSSMPL*APKATL
Trigger: TAGTGTGGCCTTGGGTGCCCAGAGTGGCATCGAGGA...AAAATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACCGTTCCCAAGCAAACTaGAACTTGCACTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHRSQAN*NLHSSM
Trigger: CATCGAGGAGTGCAAGTTCCAGTTTGCTTGGGAACG...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp CTGTTCTCTCTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGATGGGGATGAGACAATaGGGGCCTCCTTGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LFSLREKLCPLPLMQLIKMGMRQ*GPPWQG
Trigger: TCCTTGCCAAGGAGGCCCCCATTGTCTCATCCCCAT...CTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAGAGAGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS-3UTR TCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCCCAAGTCCAGAGAAGTaGGGAGAGGGCAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSPSPEK*GEGRVF
Trigger: GAAGACCCTGCCCTCTCCTCACTTCTCTGGACTTGG...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCTCCCAGAGATGCCATaGCATTTGCATGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDLPEMP*HLHVLF
Trigger: GAAAAGGACATGCAAATGTCATGGCATCTCTGGGAG...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTTGCTCTTCAGAAGTCTaGACAGAACTCTTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVCSSEV*TELFRF
Trigger: AAAACGAAAGAGTTCTGTTCAGACTTCTGAAGAGCA...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGAAGTTTGCAGGAAAGATaGAATGGGGGTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRSLQER*NGGLPK
Trigger: CTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACT...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACGCATATGCCCAGAGCTaGCCAGAGCATAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYAYAQS*PEHKQV
Trigger: AACCTGTTTATGCTCTGGGCAGCTCTGGGCATATGC...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAAAGATGCCATGACATTTaGATGTCCTTTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CFYSPDSQQHSWVGHGLKRCHDI*MSFSWW
Trigger: CCACCATGAAAAGGACATGCAAATGTCATGGCATCT...TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATTGCAGCTCCCAGAGATaGCATGACATTTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYCSSQR*HDICMS
Trigger: GGACATGCAAATGTCATGGCATCTCTGGGAGCTGCA...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACTACTTGCTCACCACATaGCTACACTGGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDYLLTT*LHWSHL
Trigger: CAAGTGTGACCAGTGTAGGCATGTGGTGAGCAAGTA...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGAGTGCGCAGTAATACTTaGTCACCACATGCCTACACT +
Preference number: 4 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRVRSNT*SPHAYT
Trigger: AGTGTAGGCATGTGGTGAGCAAGTATTACTGCGCAC...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAAGATGGGAAAGTAGTTTaGAGGAAAGATGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: CFYSPDSQQHSWVGHGLKDGKVV*RKDEMG
Trigger: CCCCATTTCATCTTTCCTGCAAACTACTTTCCCATC...TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAATTTAAAGGAAGGTCAGATAGGCCTTaGGACCTGTTATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SPDSQQHSWVGHGLKFKGRSDRP*DLLSGN
Trigger: ATTTCCTGATAACAGGTCCCAAGGCCTATCTGACCT...TCCTTTAAATTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACCGTTCCCAAGCAAACTaGAACTTGCACTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYRSQAN*NLHSSM
Trigger: CATCGAGGAGTGCAAGTTCCAGTTTGCTTGGGAACG...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATATGTCCTTTTCATGGTaGCTCTCACTGCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYMSFSW*LSLPVC
Trigger: GCAGACTGGCAGTGAGAGCCACCATGAAAAGGACAT...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGAACCGTACAGCACCACTaGAATTTGCAGTTACAGCTG +
Preference number: 4 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRTVQHH*NLQLQL
Trigger: CAGCTGTAACTGCAAATTCCAGTGGTGCTGTACGGT...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACGGACTGGGCACTGCCTaGGGAGCGTGCGCAGTAATA +
Preference number: 4 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYGLGTA*GACAVI
Trigger: TATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCC...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp CTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCAATGTTTTTCCATTGTTTaGCCCATCACAGCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LGPPFSPLIADIMRTTDQCFSIV*PITATV
Trigger: AACTGTGGCTGTGATGGGTCAAACAATGGAAAAACA...TTGGTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTTGAGTGATCAGTTCCGCCTCTaGGCTAGGAAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPSWIYLRSIYGKIQLSDQFRL*ARKEGL
Trigger: GAGGCCTTCCTTCCTAGCGCAGAGGCGGAACTGATC...ACTCAACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACTACTTGCTCACCACATaGCTACACTGGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYYLLTT*LHWSHL
Trigger: CAAGTGTGACCAGTGTAGGCATGTGGTGAGCAAGTA...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TGCTTCTATTCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAACTGCAATTTTCCGATTaGTTTCCAATCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: CFYSPDSQQHSWVGHGLKLQFSD*FPICSL
Trigger: GAGAGAACAGATTGGAAAGCAATCGGAAAATTGCAG...TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACAGGTCAGATAGGCCTTaGGACCTGTTATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHRSDRP*DLLSGN
Trigger: ATTTCCTGATAACAGGTCCCAAGGCCTATCTGACCT...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp CTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTATGTCCTTTTCATGGTaGCTCTCACTGCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LILGVCIVFLLTSVWVSIMSFSW*LSLPVC
Trigger: GCAGACTGGCAGTGAGAGCCACCATGAAAAGGACAT...AATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACTCAATTTTCAGCGCCTaGTCATACTTGGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDSIFSA*SYLAFR
Trigger: CCTAAAGGCCAAGTATGACCAGGCGCTGAAAATTGA...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp GACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACAAAGATTCAATTTTCAGCGCCTaGTCATACTTGGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: DPKPNSPCRKLHKYRHKDSIFSA*SYLAFR
Trigger: CCTAAAGGCCAAGTATGACCAGGCGCTGAAAATTGA...ATCTTTGTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TACAGGCACAAAGATGGGAAAGTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCTCAAGTGAACTTGTGTaGGGTATTATCAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: YRHKDGKVVCRKDEMGVCSSELV*GIIRHC
Trigger: GCAGTGCCTGATAATACCCCACACAAGTTCACTTGA...GCAGACCCCCATTTCATCTTTCCTGCAAACTACTTTCCCATCTTTGTGCCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp AATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACTATGCTGTAGAATCTTaGGCCTCCATTTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: NLGPPFSPLIADIMRTTDYAVES*ASIFPT
Trigger: AGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATA...GTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp AAGGTCCCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAGTTACAGCTGCTTATaGCCTCAGTTTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KVPLDIDPKPNSPCRKLHSYSCL*PQFSSL
Trigger: AAGAGAGGAAAACTGAGGTCATAAGCAGCTGTAACT...ATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGGGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp CTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCAATGCTCTTCAGAAGTCTaGACAGAACTCTTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: LGPPFSPLIADIMRTTDQCSSEV*TELFRF
Trigger: AAAACGAAAGAGTTCTGTTCAGACTTCTGAAGAGCA...TTGGTCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTTGCATATGCCCAGAGCTaGCCAGAGCATAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: NSGSLYCFPVDQCLGLNFAYAQS*PEHKQV
Trigger: AACCTGTTTATGCTCTGGGCAGCTCTGGGCATATGC...AAAATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp CTGTTCTCTCTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGAAGCAAACTGGAACTTaGACTCCTCGATGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LFSLREKLCPLPLMQLIKKQTGT*TPRCHS
Trigger: AGAGTGGCATCGAGGAGTGCAAGTTCCAGTTTGCTT...CTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAGAGAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTTGAGTATTCCACATTGTCGCTaGAGCCTCCCCAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: RSPSWIYLRSIYGKIQLSIPHCR*SLPRSS
Trigger: GCTGGATCTGGGGAGGCTGCAGCGACAATGTGGAAT...ACTCAACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp TACAGGCACAAAGATGGGAAAGTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCAGATGCCATGACATTTaGATGTCCTTTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: YRHKDGKVVCRKDEMGVCRCHDI*MSFSWW
Trigger: CCACCATGAAAAGGACATGCAAATGTCATGGCATCT...GCAGACCCCCATTTCATCTTTCCTGCAAACTACTTTCCCATCTTTGTGCCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACCCTCTGTGCCATAGATaGCCAGGCTGGAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYPLCHR*PGWNCR
Trigger: CCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGG...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp GTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTACTCACGACCCTCTGTaGCATAGATGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VIEVPAGYILEAFMAKYSTHDPL*HRCPGW
Trigger: CCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGT...ACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp AGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTTGAGTACTGCCTGGGGAGCGTaGGCAGTAATACTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RSPSWIYLRSIYGKIQLSTAWGA*AVILAH
Trigger: GTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGT...ACTCAACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACCATAGATGCCCAGGCTaGAATTGCAGGTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYHRCPG*NCRYSN
Trigger: ATTACTGTACCTGCAATTCCAGCCTGGGCATCTATG...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCTACGTCGCTCCCACCTaGATGTGTTGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSYVAPT*MCCGCS
Trigger: AGAACAGCCACAACACATCCAGGTGGGAGCGACGTA...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACTCAAGTGAACTTGTGTaGGGTATTATCAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYSSELV*GIIRHC
Trigger: GCAGTGCCTGATAATACCCCACACAAGTTCACTTGA...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACTATGCTGTAGAATCTTaGGCCTCCATTTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYYAVES*ASIFPT
Trigger: AGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATA...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp GTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTACCAGGCAGAGGCACTaGATGCAGCACAGCATATGC +
Preference number: 4 (lower is better)
Translates to: VIEVPAGYILEAFMAKYSTRQRH*MQHSIC
Trigger: GCATATGCTGTGCTGCATTCAGTGCCTCTGCCTGGT...ACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATAGTTACAGCTGCTTATaGCCTCAGTTTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: QEYAVESWASIFPTDSRYSYSCL*PQFSSL
Trigger: AAGAGAGGAAAACTGAGGTCATAAGCAGCTGTAACT...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AAAATAACACTTTCTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTGGCAGAGGCACTGAATaGAGCACAGCATATGCCCAG +
Preference number: 4 (lower is better)
Translates to: KITLSNSGSLYCFPVDQCGRGTE*STAYAQ
Trigger: CTGGGCATATGCTGTGCTGCATTCAGTGCCTCTGCC...ACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAGAAAGTGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp AATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTTAAGCAAACTGGAACTTaGACTCCTCGATGCCACTCT +
Preference number: 4 (lower is better)
Translates to: NSGSLYCFPVDQCLGLNFKQTGT*TPRCHS
Trigger: AGAGTGGCATCGAGGAGTGCAAGTTCCAGTTTGCTT...AAAATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp AAATTTAAAGGAACAAATACTTTGAAGGTCCCTCTAGATATAGACCCCAAACCAATTCCACATTGTCGCTaGAGCCTCCCCAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: KFKGTNTLKVPLDIDPKPIPHCR*SLPRSS
Trigger: GCTGGATCTGGGGAGGCTGCAGCGACAATGTGGAAT...TGGTTTGGGGTCTATATCTAGAGGGACCTTCAAAGTATTTGTTCCTTTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCTGCCCAGGCTGGAATTaGAGGTACAGTAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSCPGWN*RYSNLV
Trigger: CACCAGATTACTGTACCTGCAATTCCAGCCTGGGCA...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACCCCCAGATCCAGCCATaGCCTCCTGTTTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYPQIQP*PPVFPL
Trigger: CAATGGAAAAACAGGAGGCCATGGCTGGATCTGGGG...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCCACCTGGATGTGTTGTaGCTGTTCTGTAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSHLDVL*LFCRHS
Trigger: TGAGTGCCTACAGAACAGCCACAACACATCCAGGTG...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp AGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTTGAGTTCCCAGCAGCACAGCTaGGTTGGACATGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RSPSWIYLRSIYGKIQLSSQQHS*VGHGLK
Trigger: TTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGA...ACTCAACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp CTGTTCTCTCTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGTGTTTTTCCATTGTTTaGCCCATCACAGCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LFSLREKLCPLPLMQLIKCFSIV*PITATV
Trigger: AACTGTGGCTGTGATGGGTCAAACAATGGAAAAACA...CTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAGAGAGAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR TCA 90 bp AAAATAACACTTTCTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTTACACTGGTCACACTTaGCCGTACAGCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: KITLSNSGSLYCFPVDQCYTGHT*PYSTTG
Trigger: TCCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTA...ACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAGAAAGTGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACTTGCTTCTATTCTCCTaGTTCCCAGCAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYLLLFS*FPAAQL
Trigger: CAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCAA...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACAGGAAATTGTTCACTaGCCTACCAAAAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRQEIVH*PTKKRK
Trigger: TTTTCTCTTTTTGGTAGGTCAGTGAACAATTTCCTG...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS-3UTR TCA 90 bp AAAATAACACTTTCTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCAGGAAATTGTTCACTaGCCAGGCAGAGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: KITLSNSGSLYCFPVDQCQEIVH*PGRGTE
Trigger: TTCAGTGCCTCTGCCTGGTCAGTGAACAATTTCCTG...ACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAGAAAGTGTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp AAATTTAAAGGAACAAATACTTTGAAGGTCCCTCTAGATATAGACCCCAAACCATTGCTTCTATTCTCCTaGTTCCCAGCAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KFKGTNTLKVPLDIDPKPLLLFS*FPAAQL
Trigger: CAGCTGTGCTGCTGGGAATCAGGAGAATAGAAGCAA...TGGTTTGGGGTCTATATCTAGAGGGACCTTCAAAGTATTTGTTCCTTTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AAAATAACACTTTCTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTTGCAGCTCCCAGAGATaGCATGACATTTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: KITLSNSGSLYCFPVDQCCSSQR*HDICMS
Trigger: GGACATGCAAATGTCATGGCATCTCTGGGAGCTGCA...ACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAGAAAGTGTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp AAATTTAAAGGAACAAATACTTTGAAGGTCCCTCTAGATATAGACCCCAAACCATGCCCAGGCTGGAATTaGAGGTACAGTAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: KFKGTNTLKVPLDIDPKPCPGWN*RYSNLV
Trigger: CACCAGATTACTGTACCTGCAATTCCAGCCTGGGCA...TGGTTTGGGGTCTATATCTAGAGGGACCTTCAAAGTATTTGTTCCTTTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR GCA 90 bp AGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTTGAGTGTGCGCAGTAATACTTaGTCACCACATGCCTACACT +
Preference number: 4 (lower is better)
Translates to: RSPSWIYLRSIYGKIQLSVRSNT*SPHAYT
Trigger: AGTGTAGGCATGTGGTGAGCAAGTATTACTGCGCAC...ACTCAACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp GTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTCGTTCCCAAGCAAACTaGAACTTGCACTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: VIEVPAGYILEAFMAKYSRSQAN*NLHSSM
Trigger: CATCGAGGAGTGCAAGTTCCAGTTTGCTTGGGAACG...ACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCCATAGATGCCCAGGCTaGAATTGCAGGTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSHRCPG*NCRYSN
Trigger: ATTACTGTACCTGCAATTCCAGCCTGGGCATCTATG...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACACCGTACAGCACCACTaGAATTTGCAGTTACAGCTG +
Preference number: 4 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYTVQHH*NLQLQL
Trigger: CAGCTGTAACTGCAAATTCCAGTGGTGCTGTACGGT...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp CTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTCTCCTTTATCCTGGTaGATTATTGGGATACAGAAG +
Preference number: 4 (lower is better)
Translates to: LILGVCIVFLLTSVWVSISPLSW*IIGIQK
Trigger: CTTCTGTATCCCAATAATCCACCAGGATAAAGGAGA...AATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp CTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTGTTTCTCCTTTATCCTaGTGGATTATTGGGATACAG +
Preference number: 4 (lower is better)
Translates to: LILGVCIVFLLTSVWVSIVSPLS*WIIGIQ
Trigger: CTGTATCCCAATAATCCACCAGGATAAAGGAGAAAC...AATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCTGTTTTTCCATTGTTTaGCCCATCACAGCCACAGTT +
Preference number: 4 (lower is better)
Translates to: FVTCQTLKSRELHISSFSCFSIV*PITATV
Trigger: AACTGTGGCTGTGATGGGTCAAACAATGGAAAAACA...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp AATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTTTGCTCTTCAGAAGTCTaGACAGAACTCTTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: NSGSLYCFPVDQCLGLNFCSSEV*TELFRF
Trigger: AAAACGAAAGAGTTCTGTTCAGACTTCTGAAGAGCA...AAAATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp GTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTTACTTGCTCACCACATaGCTACACTGGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: VIEVPAGYILEAFMAKYSYLLTT*LHWSHL
Trigger: CAAGTGTGACCAGTGTAGGCATGTGGTGAGCAAGTA...ACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CCA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACTCAATTTTCAGCGCCTaGTCATACTTGGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYSIFSA*SYLAFR
Trigger: CCTAAAGGCCAAGTATGACCAGGCGCTGAAAATTGA...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACTTACCTGCCAAACACTaGAATCAAGGGAGTTGCATA +
Preference number: 4 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYLPAKH*NQGSCI
Trigger: TATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAA...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR TCA 90 bp GTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTAGTTACAGCTGCTTATaGCCTCAGTTTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VIEVPAGYILEAFMAKYSSYSCL*PQFSSL
Trigger: AAGAGAGGAAAACTGAGGTCATAAGCAGCTGTAACT...ACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR GCA 90 bp AAATTTAAAGGAACAAATACTTTGAAGGTCCCTCTAGATATAGACCCCAAACCAAGATGCCATGACATTTaGATGTCCTTTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KFKGTNTLKVPLDIDPKPRCHDI*MSFSWW
Trigger: CCACCATGAAAAGGACATGCAAATGTCATGGCATCT...TGGTTTGGGGTCTATATCTAGAGGGACCTTCAAAGTATTTGTTCCTTTAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CCA 90 bp AAAATAACACTTTCTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTAATAGAAGTCCCAGCTaGATATATCTTAGAAGCATT +
Preference number: 4 (lower is better)
Translates to: KITLSNSGSLYCFPVDQCNRSPS*IYLRSI
Trigger: AATGCTTCTAAGATATATCCAGCTGGGACTTCTATT...ACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAGAAAGTGTTATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS CCA 90 bp GCCCACACTCAGTGCACAGGCGCCCACAGCTACGTCGCTCCCACCTaGATGTGTTGTGGCTGTTCTGTAGGCACTCACGACCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: AHTQCTGAHSYVAPT*MCCGCSVGTHDPLC
Trigger: GCACAGAGGGTCGTGAGTGCCTACAGAACAGCCACAACACATCCAGGTGGGAGCGACGTAGCTGTGGGCGCCTGTGCACTGAGTGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS GCA 90 bp TCAGGCACTGCCCTTACCCAGGGACTGGGCACTGCCTGGGGAGCGTaGGCAGTAATACTTGCTCACCACATGCCTACACTGGTCACACTT +
Preference number: 5 (lower is better)
Translates to: SGTALTQGLGTAWGA*AVILAHHMPTLVTL
Trigger: AAGTGTGACCAGTGTAGGCATGTGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGGCAGTGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS GCA 90 bp GTGTGGGGTATTATCAGGCACTGCCCTTACCCAGGGACTGGGCACTaGCTGGGGAGCGTGCGCAGTAATACTTGCTCACCACATGCCTAC +
Preference number: 5 (lower is better)
Translates to: VWGIIRHCPYPGTGH*LGSVRSNTCSPHAY
Trigger: GTAGGCATGTGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGGCAGTGCCTGATAATACCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS CCA 90 bp GGGGTATTATCAGGCACTGCCCTTACCCAGGGACTGGGCACTGCCTaGGGAGCGTGCGCAGTAATACTTGCTCACCACATGCCTACACTG +
Preference number: 5 (lower is better)
Translates to: GVLSGTALTQGLGTA*GACAVILAHHMPTL
Trigger: CAGTGTAGGCATGTGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGGCAGTGCCTGATAATACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATCCCACCTGGATGTGTaGTGGCTGTTCTGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQESHLDV*WLFCRH
Trigger: GTGCCTACAGAACAGCCACAACACATCCAGGTGGGA...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS GCA 90 bp CCCAAACCAAACTCTCCCCAGGGACTGGGCACTGCCTGGGGAGCGTaGGCAGTAATACTTGCTCACCACATGCCTACACTGGTCACACTT +
Preference number: 5 (lower is better)
Translates to: PKPNSPQGLGTAWGA*AVILAHHMPTLVTL
Trigger: AAGTGTGACCAGTGTAGGCATGTGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGGAGAGTTTGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAACAAGCAAACTGGAACTaGCACTCCTCGATGCCACTC +
Preference number: 5 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQEQANWN*HSSMPL
Trigger: GAGTGGCATCGAGGAGTGCAAGTTCCAGTTTGCTTG...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS GCA 90 bp GCCAGCATGTCTGTATGCTGCAGCTCCCAGAGATGCCATGACATTTaGATGTCCTTTTCATGGTGGCTCTCACTGCCAGTCTGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: ASMSVCCSSQRCHDI*MSFSWWLSLPVCRP
Trigger: GGGCCGGCAGACTGGCAGTGAGAGCCACCATGAAAAGGACATGCAAATGTCATGGCATCTCTGGGAGCTGCAGCATACAGACATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS-3UTR CAA 90 bp GGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATTCCCACCTGGATGTGTaGTGGCTGTTCTGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: GSAKVRRPRFQFQPRQEYSHLDV*WLFCRH
Trigger: GTGCCTACAGAACAGCCACAACACATCCAGGTGGGA...ATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp GCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAATATGCTGTACTACACTGGTCACACTaGACCGTACAGCACCACTGG +
Preference number: 5 (lower is better)
Translates to: AKVRRPRFQFQPRQEYAVLHWSH*TVQHHW
Trigger: CCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTAG...TACAGCATATTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp TGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAATTTCAGCCCCGCCAGGAAATATGCTGTAGAATCTaGGGCCTCCATTTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: WGSAKVRRPRFQFQPRQEICCRI*GLHFPH
Trigger: GTGGGGAAAATGGAGGCCCAAGATTCTACAGCATAT...TTCCTGGCGGGGCTGAAATTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp TTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAAACAATGGGGGCCTCCTaGGCAAGGAGTGAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: FAGKMKWGSAKVRRPRFQTMGAS*ARSEGW
Trigger: CCAACCCTCACTCCTTGCCAAGGAGGCCCCCATTGT...TTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS TCA 90 bp CTACCCCAGTGGACCAGGTCCAGCTCAGGGCCAAGTCCAGAGAAGTaGGGAGAGGGCAGGGTCTTCCTCAGTATTTATGTGAGAAAATTC +
Preference number: 5 (lower is better)
Translates to: LPQWTRSSSGPSPEK*GEGRVFLSIYVRKF
Trigger: GAATTTTCTCACATAAATACTGAGGAAGACCCTGCCCTCTCCTCACTTCTCTGGACTTGGCCCTGAGCTGGACCTGGTCCACTGGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS GCA 90 bp ACCTGGATGTGTTGTGGCTGTTCTGTAGGCACTCACGACCCTCTGTaGCATAGATGCCCAGGCTGGAATTGCAGGTACAGTAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: TWMCCGCSVGTHDPL*HRCPGWNCRYSNLV
Trigger: CACCAGATTACTGTACCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGTGCCTACAGAACAGCCACAACACATCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS GCA 90 bp TGTTGTGGCTGTTCTGTAGGCACTCACGACCCTCTGTGCCATAGATaGCCAGGCTGGAATTGCAGGTACAGTAATCTGGTGATTCCTCTA +
Preference number: 5 (lower is better)
Translates to: CCGCSVGTHDPLCHR*PGWNCRYSNLVIPL
Trigger: TAGAGGAATCACCAGATTACTGTACCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGTGCCTACAGAACAGCCACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CCA 90 bp TCAGCTGCCGCTTATCCATTTCAATTTTCAGCGCCTGGTCATACTTaGCCTTTAGGTAGTCTCCCATCTCCCGGAATTCAGCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SAAAYPFQFSAPGHT*PLGSLPSPGIQPAA
Trigger: TGCAGCTGGCTGAATTCCGGGAGATGGGAGACTACCTAAAGGCCAAGTATGACCAGGCGCTGAAAATTGAAATGGATAAGCGGCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS GCA 90 bp GTAGGCACTCACGACCCTCTGTGCCATAGATGCCCAGGCTGGAATTaGAGGTACAGTAATCTGGTGATTCCTCTAAAAAGATCAGTTCCG +
Preference number: 5 (lower is better)
Translates to: VGTHDPLCHRCPGWN*RYSNLVIPLKRSVP
Trigger: CGGAACTGATCTTTTTAGAGGAATCACCAGATTACTGTACCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGTGCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS-3UTR CAA 90 bp GTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCACCCATGCTACAGTTCTaGGTGATGATGTACATGACT +
Preference number: 5 (lower is better)
Translates to: VCRKDEMGVCQSQEAQVPPMLQF*VMMYMT
Trigger: AGTCATGTACATCATCACCAAGAACTGTAGCATGGG...TGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp GATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACAGGCACCAAGCAAACTGGAACTaGCACTCCTCGATGCCACTC +
Preference number: 5 (lower is better)
Translates to: DIDPKPNSPCRKLHKYRHQANWN*HSSMPL
Trigger: GAGTGGCATCGAGGAGTGCAAGTTCCAGTTTGCTTG...GTGCCTGTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp TTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTCCAACTGTTTTTCCATTGTTaGACCCATCACAGCCACAGT +
Preference number: 5 (lower is better)
Translates to: FAGKMKWGSAKVRRPRFQLFFHC*THHSHS
Trigger: ACTGTGGCTGTGATGGGTCAAACAATGGAAAAACAG...TTGGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp CAGGAATATGCTGTAGAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCTACACTGGTCACACTaGACCGTACAGCACCACTGG +
Preference number: 5 (lower is better)
Translates to: QEYAVESWASIFPTDSRYLHWSH*TVQHHW
Trigger: CCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTAG...ATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTCTACAGCATATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS TCA 90 bp CTAAGAGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGTaGACTTGTGTGGGGTATTATCAGGCACTGCCCTTACCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LREKLCPLPLMQLIK*TCVGYYQALPLPRD
Trigger: GTCCCTGGGTAAGGGCAGTGCCTGATAATACCCCACACAAGTTCACTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS CCA 90 bp TGTTCTGTAGGCACTCACGACCCTCTGTGCCATAGATGCCCAGGCTaGAATTGCAGGTACAGTAATCTGGTGATTCCTCTAAAAAGATCA +
Preference number: 5 (lower is better)
Translates to: CSVGTHDPLCHRCPG*NCRYSNLVIPLKRS
Trigger: TGATCTTTTTAGAGGAATCACCAGATTACTGTACCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGTGCCTACAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS-3UTR CAA 90 bp TCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAATTTAAAGGACCTCCTGTTTTTCCATaGTTTGACCCATCACAGCCA +
Preference number: 5 (lower is better)
Translates to: SPDSQQHSWVGHGLKFKGPPVFP*FDPSQP
Trigger: TGGCTGTGATGGGTCAAACAATGGAAAAACAGGAGG...TCCTTTAAATTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp CTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTTCCCACCTGGATGTGTaGTGGCTGTTCTGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: LILGVCIVFLLTSVWVSISHLDV*WLFCRH
Trigger: GTGCCTACAGAACAGCCACAACACATCCAGGTGGGA...AATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp GAATCTTGGGCCTCCATTTTCCCCACTGATAGCAGATATCATGAGGACTACAGACCTCCTGTTTTTCCATaGTTTGACCCATCACAGCCA +
Preference number: 5 (lower is better)
Translates to: ESWASIFPTDSRYHEDYRPPVFP*FDPSQP
Trigger: TGGCTGTGATGGGTCAAACAATGGAAAAACAGGAGG...TCTGTAGTCCTCATGATATCTGCTATCAGTGGGGAAAATGGAGGCCCAAGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp GTAGTTTGCAGGAAAGATGAAATGGGGGTCTGCCAAAGTCAGGAGGCCCAGGTTATTAATCAAGTGAACTaGTGTGGGGTATTATCAGGC +
Preference number: 5 (lower is better)
Translates to: VVCRKDEMGVCQSQEAQVINQVN*CGVLSG
Trigger: GCCTGATAATACCCCACACAAGTTCACTTGATTAAT...AACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCAAACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCCAAGCAAACTGGAACTaGCACTCCTCGATGCCACTC +
Preference number: 5 (lower is better)
Translates to: FVTCQTLKSRELHISSFSQANWN*HSSMPL
Trigger: GAGTGGCATCGAGGAGTGCAAGTTCCAGTTTGCTTG...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp CCTCTAGATATAGACCCCAAACCAAACTCTCCCTGTAGAAAGCTGCATAAGTACCTGTTTTTCCATTGTTaGACCCATCACAGCCACAGT +
Preference number: 5 (lower is better)
Translates to: PLDIDPKPNSPCRKLHKYLFFHC*THHSHS
Trigger: ACTGTGGCTGTGATGGGTCAAACAATGGAAAAACAG...GTACTTATGCAGCTTTCTACAGGGAGAGTTTGGTTTGGGGTCTATATCTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS-3UTR CAA 90 bp CTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCTGGGTCTCAATTCCTCCTGTTTTTCCATaGTTTGACCCATCACAGCCA +
Preference number: 5 (lower is better)
Translates to: LILGVCIVFLLTSVWVSIPPVFP*FDPSQP
Trigger: TGGCTGTGATGGGTCAAACAATGGAAAAACAGGAGG...AATTGAGACCCAGACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp GGAGTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACCTACACTGGTCACACTaGACCGTACAGCACCACTGG +
Preference number: 5 (lower is better)
Translates to: GVIEVPAGYILEAFMAKYLHWSH*TVQHHW
Trigger: CCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTAG...GTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp TCTCCTGATTCCCAGCAGCACAGCTGGGTTGGACATGGTCTGAAATTTAAAGGACCTGTTATCAGGAAATaGTTCACTGACCTACCAAAA +
Preference number: 5 (lower is better)
Translates to: SPDSQQHSWVGHGLKFKGPVIRK*FTDLPK
Trigger: TTTTGGTAGGTCAGTGAACAATTTCCTGATAACAGG...TCCTTTAAATTTCAGACCATGTCCAACCCAGCTGTGCTGCTGGGAATCAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506684.6
CDS-3UTR CAA 90 bp AAAATAACACTTTCTAATTCTGGGAGTCTGTATTGTTTTCCTGTTGACCAGTGTCCCATGCTACAGTTCTaGGTGATGATGTACATGACT +
Preference number: 5 (lower is better)
Translates to: KITLSNSGSLYCFPVDQCPMLQF*VMMYMT
Trigger: AGTCATGTACATCATCACCAAGAACTGTAGCATGGG...ACACTGGTCAACAGGAAAACAATACAGACTCCCAGAATTAGAAAGTGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp GTAATAGAAGTCCCAGCTGGATATATCTTAGAAGCATTTATGGCAAAATACAGTCTGTTTTTCCATTGTTaGACCCATCACAGCCACAGT +
Preference number: 5 (lower is better)
Translates to: VIEVPAGYILEAFMAKYSLFFHC*THHSHS
Trigger: ACTGTGGCTGTGATGGGTCAAACAATGGAAAAACAG...ACTGTATTTTGCCATAAATGCTTCTAAGATATATCCAGCTGGGACTTCTATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp TTTGTTACCTGCCAAACACTGAAATCAAGGGAGTTGCATATTTCTAGTTTCTCCCTGAAATCAAGGGAGTaGCATATTTCTAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: FVTCQTLKSRELHISSFSLKSRE*HISSFS
Trigger: GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAG...GGAGAAACTAGAAATATGCAACTCCCTTGATTTCAGTGTTTGGCAGGTAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS-3UTR CAA 90 bp AAATTTAAAGGAACAAATACTTTGAAGGTCCCTCTAGATATAGACCCCAAACCAATTAATCAAGTGAACTaGTGTGGGGTATTATCAGGC +
Preference number: 5 (lower is better)
Translates to: KFKGTNTLKVPLDIDPKPINQVN*CGVLSG
Trigger: GCCTGATAATACCCCACACAAGTTCACTTGATTAAT...TGGTTTGGGGTCTATATCTAGAGGGACCTTCAAAGTATTTGTTCCTTTAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS CCA 72 bp TCTGCGCTAGGAAGGAAGGCCTCAGCGGGCACCCAGTaGCCCTCGGCGCTGTTCCCAGCTCTCAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SALGRKASAGTQ*PSALFPALSCR
Trigger: GCGGCAGCTGAGAGCTGGGAACAGCGCCGAGGGCCACTGGGTGCCCGCTGAGGCCTTCCTTCCTAGCGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS GCA 72 bp CAGTTTTCCTCTCTTCCACCTGCAGCCCACACTCAGTaGACAGGCGCCCACAGCTACGTCGCTCCCACCTGG +
Preference number: 6 (lower is better)
Translates to: QFSSLPPAAHTQ*TGAHSYVAPTW
Trigger: CCAGGTGGGAGCGACGTAGCTGTGGGCGCCTGTGCACTGAGTGTGGGCTGCAGGTGGAAGAGAGGAAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS GCA 72 bp GCCCTTACCCAGGGACTGGGCACTGCCTGGGGAGCGTaGGCAGTAATACTTGCTCACCACATGCCTACACTG +
Preference number: 6 (lower is better)
Translates to: ALTQGLGTAWGA*AVILAHHMPTL
Trigger: CAGTGTAGGCATGTGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS CCA 72 bp CAGTGCACAGGCGCCCACAGCTACGTCGCTCCCACCTaGATGTGTTGTGGCTGTTCTGTAGGCACTCACGAC +
Preference number: 6 (lower is better)
Translates to: QCTGAHSYVAPT*MCCGCSVGTHD
Trigger: GTCGTGAGTGCCTACAGAACAGCCACAACACATCCAGGTGGGAGCGACGTAGCTGTGGGCGCCTGTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CCA 72 bp TCAGGCACTGCCCTTACCCAGGGACTGGGCACTGCCTaGGGAGCGTGCGCAGTAATACTTGCTCACCACATG +
Preference number: 6 (lower is better)
Translates to: SGTALTQGLGTA*GACAVILAHHM
Trigger: CATGTGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGGCAGTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS CAA 72 bp AGGCGCCCACAGCTACGTCGCTCCCACCTGGATGTGTaGTGGCTGTTCTGTAGGCACTCACGACCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: RRPQLRRSHLDV*WLFCRHSRPSV
Trigger: CACAGAGGGTCGTGAGTGCCTACAGAACAGCCACAACACATCCAGGTGGGAGCGACGTAGCTGTGGGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CCA 72 bp CCCAAACCAAACTCTCCCCAGGGACTGGGCACTGCCTaGGGAGCGTGCGCAGTAATACTTGCTCACCACATG +
Preference number: 6 (lower is better)
Translates to: PKPNSPQGLGTA*GACAVILAHHM
Trigger: CATGTGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGGAGAGTTTGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361560.6
CDS GCA 72 bp ATTATCAGGCACTGCCCTTACCCAGGGACTGGGCACTaGCTGGGGAGCGTGCGCAGTAATACTTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: IIRHCPYPGTGH*LGSVRSNTCSP
Trigger: TGGTGAGCAAGTATTACTGCGCACGCTCCCCAGGCAGTGCCCAGTCCCTGGGTAAGGGCAGTGCCTGATAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS GCA 72 bp GCAGCCAGCATGTCTGTATGCTGCAGCTCCCAGAGATaGCATGACATTTGCATGTCCTTTTCATGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: AASMSVCCSSQR*HDICMSFSWWL
Trigger: GAGCCACCATGAAAAGGACATGCAAATGTCATGGCATCTCTGGGAGCTGCAGCATACAGACATGCTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS GCA 72 bp TGTTCTGTAGGCACTCACGACCCTCTGTGCCATAGATaGCCAGGCTGGAATTGCAGGTACAGTAATCTGGTG +
Preference number: 6 (lower is better)
Translates to: CSVGTHDPLCHR*PGWNCRYSNLV
Trigger: CACCAGATTACTGTACCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGTGCCTACAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CCA 72 bp CAGAGATGCCATGACATTTGCATGTCCTTTTCATGGTaGCTCTCACTGCCAGTCTGCCGGCCCTGTTGTTGT +
Preference number: 6 (lower is better)
Translates to: QRCHDICMSFSW*LSLPVCRPCCC
Trigger: ACAACAACAGGGCCGGCAGACTGGCAGTGAGAGCCACCATGAAAAGGACATGCAAATGTCATGGCATCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CCA 72 bp GGCACTCACGACCCTCTGTGCCATAGATGCCCAGGCTaGAATTGCAGGTACAGTAATCTGGTGATTCCTCTA +
Preference number: 6 (lower is better)
Translates to: GTHDPLCHRCPG*NCRYSNLVIPL
Trigger: TAGAGGAATCACCAGATTACTGTACCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGGGTCGTGAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CCA 72 bp AGCACAGCTGGGTTGGACATGGTCACATGCCTACACTaGTCACACTTGACCGTACAGCACCACTGGAATTTG +
Preference number: 6 (lower is better)
Translates to: STAGLDMVTCLH*SHLTVQHHWNL
Trigger: CAAATTCCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTAGGCATGTGACCATGTCCAACCCAGCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504809.5
CDS GCA 72 bp TCTGTATGCTGCAGCTCCCAGAGATGCCATGACATTTaGATGTCCTTTTCATGGTGGCTCTCACTGCCAGTC +
Preference number: 6 (lower is better)
Translates to: SVCCSSQRCHDI*MSFSWWLSLPV
Trigger: GACTGGCAGTGAGAGCCACCATGAAAAGGACATGCAAATGTCATGGCATCTCTGGGAGCTGCAGCATACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CAA 90 bp AGAGAAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGTGAACTaGTGTGGGGTATTATCAGGCACTGCCCTTACCCAGGGACTGGGC +
Preference number: 6 (lower is better)
Translates to: REAMSPSTDAINQVN*CGVLSGTALTQGLG
Trigger: GCCCAGTCCCTGGGTAAGGGCAGTGCCTGATAATACCCCACACAAGTTCACTTGATTAATTGCATCAGTGGAAGGGGACATAGCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS CAA 90 bp ACATGCCTACACTGGTCACACTTGACCGTACAGCACCACTGGAATTaGCAGTTACAGCTGCTTATGACCTCAGTTTTCCTCTCTTCCACC +
Preference number: 6 (lower is better)
Translates to: TCLHWSHLTVQHHWN*QLQLLMTSVFLSST
Trigger: GGTGGAAGAGAGGAAAACTGAGGTCATAAGCAGCTGTAACTGCAAATTCCAGTGGTGCTGTACGGTCAAGTGTGACCAGTGTAGGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS GCA 72 bp CACGACCCTCTGTGCCATAGATGCCCAGGCTGGAATTaGAGGTACAGTAATCTGGTGATTCCTCTAAAAAGA +
Preference number: 6 (lower is better)
Translates to: HDPLCHRCPGWN*RYSNLVIPLKR
Trigger: TCTTTTTAGAGGAATCACCAGATTACTGTACCTGCAATTCCAGCCTGGGCATCTATGGCACAGAGGGTCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CCA 72 bp GCTTATCCATTTCAATTTTCAGCGCCTGGTCATACTTaGCCTTTAGGTAGTCTCCCATCTCCCGGAATTCAG +
Preference number: 6 (lower is better)
Translates to: AYPFQFSAPGHT*PLGSLPSPGIQ
Trigger: CTGAATTCCGGGAGATGGGAGACTACCTAAAGGCCAAGTATGACCAGGCGCTGAAAATTGAAATGGATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361560.6
ENST00000398754.1
ENST00000504809.5
ENST00000506684.6
CDS CAA 72 bp ATGTCCCCTTCCACTGATGCAATTAATCAAGTGAACTaGTGTGGGGTATTATCAGGCACTGCCCTTACCCAG +
Preference number: 6 (lower is better)
Translates to: MSPSTDAINQVN*CGVLSGTALTQ
Trigger: CTGGGTAAGGGCAGTGCCTGATAATACCCCACACAAGTTCACTTGATTAATTGCATCAGTGGAAGGGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6
CDS TCA 72 bp AAGCTATGTCCCCTTCCACTGATGCAATTAATCAAGTaGACTTGTGTGGGGTATTATCAGGCACTGCCCTTA +
Preference number: 6 (lower is better)
Translates to: KLCPLPLMQLIK*TCVGYYQALPL
Trigger: TAAGGGCAGTGCCTGATAATACCCCACACAAGTTCACTTGATTAATTGCATCAGTGGAAGGGGACATAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398754.1
ENST00000506684.6