RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT7B (Homo sapiens)

Ensembl gene IDs: ENSG00000188064

Ensembl transcript IDs: ENST00000339464.9, ENST00000409496.7, ENST00000410058.1, ENST00000410089.5, ENST00000428540.1

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGCGGGCAGAGGGCGTGGGCCCCGGCCGGTGCCCTCCTGCACCTaGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: EAGRGRGPRPVPSCT*SSPLLHPSMSAAGS
Trigger: GCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGCCGGGGCCCACGCCCTCTGCCCGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR GCA 90 bp GCTGGCAGCACCAAGGCAGGGAAGGTGAGGAGTGGATGTGCAAAATaGCGCCGGGTTCCAGGGTGCCCGCGGCCGCCTCCGGGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: AGSTKAGKVRSGCAK*RRVPGCPRPPPGLA
Trigger: GGCCAGGCCCGGAGGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGCCTTGGTGCTGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR GCA 90 bp GCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTaGTGCTGGCAGCACCAAGGCAGGGAAGGTGAGGAGTGGATGTGC +
Preference number: 1 (lower is better)
Translates to: ALLHLELPASAPVYV*CWQHQGREGEEWMC
Trigger: GCACATCCACTCCTCACCTTCCCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR GCA 90 bp GGTGGAGGGAGCAGCCAAGTGCCTCAAGGCATGGGAGCTACCTACTaGCACCCCGGGCATCCTGATGTGTTCTCCCAGGTCCAGAGCCCC +
Preference number: 1 (lower is better)
Translates to: GGGSSQVPQGMGATY*HPGHPDVFSQVQSP
Trigger: GGGGCTCTGGACCTGGGAGAACACATCAGGATGCCCGGGGTGGCAGTAGGTAGCTCCCATGCCTTGAGGCACTTGGCTGCTCCCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR CCA 90 bp AGGAGCCTGTCCATGGCTCTCCTCCAAGGCCCGGTCAGGGCTGTGTaGTCTGAAGAGCCCCTGCCCAGCTCACTTCTAGGACCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: RSLSMALLQGPVRAV*SEEPLPSSLLGPAG
Trigger: GCCTGCAGGTCCTAGAAGTGAGCTGGGCAGGGGCTCTTCAGACCACACAGCCCTGACCGGGCCTTGGAGGAGAGCCATGGACAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR TCA 90 bp AGTGCCTCAAGGCATGGGAGCTACCTACTGCCACCCCGGGCATCCTaGTGTGTTCTCCCAGGTCCAGAGCCCCAGGCTGGGCAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: SASRHGSYLLPPRAS*CVLPGPEPQAGQEK
Trigger: TTTCTCCTGCCCAGCCTGGGGCTCTGGACCTGGGAGAACACATCAGGATGCCCGGGGTGGCAGTAGGTAGCTCCCATGCCTTGAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR GCA 90 bp CTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTaGTGGCAGCACCAAGGCAGGGAAGGTGAGGAGTGGATGTGCAAA +
Preference number: 1 (lower is better)
Translates to: LLHLELPASAPVYVC*WQHQGREGEEWMCK
Trigger: TTTGCACATCCACTCCTCACCTTCCCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR CCA 90 bp TCCAGAAAGGACATGTCCAGCTCTGGATCCAGATTTTCTCAGCACTaGGGTCAGGGTAAAAGGACCAGGACAGGGCTAGGCGAAGCCTCA +
Preference number: 1 (lower is better)
Translates to: SRKDMSSSGSRFSQH*GQGKRTRTGLGEAS
Trigger: TGAGGCTTCGCCTAGCCCTGTCCTGGTCCTTTTACCCTGACCCCAGTGCTGAGAAAATCTGGATCCAGAGCTGGACATGTCCTTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR GCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGGGCCCCGGCCGGTaGCCTCCTGCACCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEVGPGR*PPAPGA
Trigger: AGCTCCAGGTGCAGGAGGGCACCGGCCGGGGCCCAC...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGTGGGCCCCGGCCGGTaGCCTCCTGCACCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDVGPGR*PPAPGA
Trigger: AGCTCCAGGTGCAGGAGGGCACCGGCCGGGGCCCAC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCGAGCACCAAGACCCCTaGCCTTGCTCTCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSEHQDP*PCSLGG
Trigger: CCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTC...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCAGAAGAAAGAGAACTTaGCGGGCCCCGTCGGGGAGC +
Preference number: 2 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSRRKRT*RAPSGS
Trigger: GCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCT...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR TCA 90 bp GAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTTGGTCGCCATCACCCCCATGAGTGCAGGCCCCAATaGGGCTGTCAGGGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: EAAVRRVGTQHLGRHHPHECRPQ*GCQGVE
Trigger: CTCCACCCCCTGACAGCCTCATTGGGGCCTGCACTC...ATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR CCA 90 bp GAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTTGGTCGCCATCACCCCCATGTGCCCTCCTGCACCTaGAGCTCCCCGCTTCTGCAC +
Preference number: 2 (lower is better)
Translates to: EAAVRRVGTQHLGRHHPHVPSCT*SSPLLH
Trigger: GTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC...ATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR CCA 90 bp GAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTTGGTCGCCATCACCCCCATCCGGTCAGGGCTGTGTaGTCTGAAGAGCCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: EAAVRRVGTQHLGRHHPHPVRAV*SEEPLP
Trigger: GGGCAGGGGCTCTTCAGACCACACAGCCCTGACCGG...ATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR CCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACGGAGGAGCCTGTCCATaGCTCTCCTCCAAGGCCCGG +
Preference number: 2 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDGGACP*LSSKAR
Trigger: CCGGGCCTTGGAGGAGAGCCATGGACAGGCTCCTCC...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR CCA 90 bp GAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTTGGTCGCCATCACCCCCATGAGCACCAAGACCCCTaGCCTTGCTCTCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: EAAVRRVGTQHLGRHHPHEHQDP*PCSLGG
Trigger: CCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTC...ATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR GCA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCAGTGGATGTGCAAAATaGCGCCGGGTTCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: AGALLHLELPASAPVYVCSGCAK*RRVPGC
Trigger: GCACCCTGGAACCCGGCGGCATTTTGCACATCCACT...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCGGAGCTCCCCGCTTCTaGACCCGTCTATGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFGAPRF*TRLCLL
Trigger: CAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp GAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTTGGTCGCCATCACCCCCATCTGAGCCCAGGCCCTTaGCTTGTCGGCTGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: EAAVRRVGTQHLGRHHPHLSPGP*LVGCSR
Trigger: TCTTGAGCAGCCGACAAGCCAAGGGCCTGGGCTCAG...ATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR GCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGGTGAGGAGTGGATGTaGAAAATGCCGCCGGGTTCC +
Preference number: 2 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEGEEWM*KMPPGS
Trigger: GGAACCCGGCGGCATTTTGCACATCCACTCCTCACC...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGCACCCGTCTATGTCTaGTGCTGGCAGCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDAPVYV*CWQHQG
Trigger: GCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTTGGGTGGGTCACGGGTaGTGTTCTGCCGCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSWVGHG*CSAAGG
Trigger: ACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCA...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGAGCACCAAGACCCCTaGCCTTGCTCTCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSEHQDP*PCSLGG
Trigger: CCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTC...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGTGAGGAGTGGATGTaGAAAATGCCGCCGGGTTCC +
Preference number: 2 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAGEEWM*KMPPGS
Trigger: GGAACCCGGCGGCATTTTGCACATCCACTCCTCACC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCCCGTCTATGTCTGCTaGTGGCAGCACCAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLPVYVC*WQHQGR
Trigger: CCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGG...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACCAAGACCCCTGGCCTTaGTCTCTGGGTGGGTCACGG +
Preference number: 2 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYQDPWP*SLGGSR
Trigger: CCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTG...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGAGTGGATGTGCAAAATaGCGCCGGGTTCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLSGCAK*RRVPGC
Trigger: GCACCCTGGAACCCGGCGGCATTTTGCACATCCACT...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCCCGTCTATGTCTGCTaGTGGCAGCACCAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCPVYVC*WQHQGR
Trigger: CCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGG...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGCACCCGTCTATGTCTaGTGCTGGCAGCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYAPVYV*CWQHQG
Trigger: GCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTAGGGAAGGTGAGGAGTaGATGTGCAAAATGCCGCCG +
Preference number: 2 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAREGEE*MCKMPP
Trigger: CGGCGGCATTTTGCACATCCACTCCTCACCTTCCCT...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCAAGGGAAGGTGAGGAGTaGATGTGCAAAATGCCGCCG +
Preference number: 2 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAAREGEE*MCKMPP
Trigger: CGGCGGCATTTTGCACATCCACTCCTCACCTTCCCT...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGGTCTATGTCTGCTGCTaGCAGCACCAAGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLVYVCC*QHQGRE
Trigger: TTCCCTGCCTTGGTGCTGCCAGCAGCAGACATAGAC...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGAGGGAAGGTGAGGAGTaGATGTGCAAAATGCCGCCG +
Preference number: 2 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLREGEE*MCKMPP
Trigger: CGGCGGCATTTTGCACATCCACTCCTCACCTTCCCT...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGTCTATGTCTGCTGCTaGCAGCACCAAGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSVYVCC*QHQGRE
Trigger: TTCCCTGCCTTGGTGCTGCCAGCAGCAGACATAGAC...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACAGTGGATGTGCAAAATaGCGCCGGGTTCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDSGCAK*RRVPGC
Trigger: GCACCCTGGAACCCGGCGGCATTTTGCACATCCACT...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCGATACAGGTGTGTCCTaGACGTTCATTTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSDTGVS*TFIFPE
Trigger: CTCTGGGAAAATGAACGTCCAGGACACACCTGTATC...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGGATACAGGTGTGTCCTaGACGTTCATTTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQDTGVS*TFIFPE
Trigger: CTCTGGGAAAATGAACGTCCAGGACACACCTGTATC...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCCAAGACCCCTGGCCTTaGTCTCTGGGTGGGTCACGG +
Preference number: 2 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFQDPWP*SLGGSR
Trigger: CCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTG...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCGTCTCCTCATCACTTTaGTCTCTGGGATACAGGTGT +
Preference number: 2 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCVSSSL*SLGYRC
Trigger: ACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGAC...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCCCTGGCCTTGCTCTCTaGGTGGGTCACGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFPGLAL*VGHGCC
Trigger: ACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTCCCGTCTATGTCTGCTaGTGGCAGCACCAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIPVYVC*WQHQGR
Trigger: CCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGG...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTGCACCCGTCTATGTCTaGTGCTGGCAGCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIAPVYV*CWQHQG
Trigger: GCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGC...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTAGAAGAAAGAGAACTTaGCGGGCCCCGTCGGGGAGC +
Preference number: 2 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIRRKRT*RAPSGS
Trigger: GCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCT...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAACCTGGCCTTGCTCTCTaGGTGGGTCACGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREPGLAL*VGHGCC
Trigger: ACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR GCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAAGGAGCTCCCCGCTTCTaGACCCGTCTATGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREGAPRF*TRLCLL
Trigger: CAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR GCA 72 bp ACCAAGGCAGGGAAGGTGAGGAGTGGATGTGCAAAATaGCGCCGGGTTCCAGGGTGCCCGCGGCCGCCTCCG +
Preference number: 3 (lower is better)
Translates to: TKAGKVRSGCAK*RRVPGCPRPPP
Trigger: CGGAGGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGCCTTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR GCA 72 bp GGCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTaGACCCGTCTATGTCTGCTGCTGGCAGCACCAAGG +
Preference number: 3 (lower is better)
Translates to: GRCPPAPGAPRF*TRLCLLLAAPR
Trigger: CCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CAA 90 bp AATTTGTGTCAACATCTGTCCCCACCGCCCCAGGGCCCAGCGGCAGACCCAGCCCCAAGACCCCTGGCCTaGCTCTCTGGGTGGGTCACG +
Preference number: 3 (lower is better)
Translates to: NLCQHLSPPPQGPAADPAPRPLA*LSGWVT
Trigger: CGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGG...GGCTGGGTCTGCCGCTGGGCCCTGGGGCGGTGGGGACAGATGTTGACACAAATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR GCA 72 bp AAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTaGTGTTCTGCCGCAGGAGGTGATGGGAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: KTPGLALWVGHG*CSAAGGDGRRW
Trigger: CCACCTCCTCCCATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR CCA 72 bp GTGCCCGGCAGCCAAGGGACAGTGCGAGTGTCTCGGTaGCATCAGGGGCCCCAAGGGTCTGTTGAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: VPGSQGTVRVSR*HQGPQGSVEAG
Trigger: TCCTGCTTCAACAGACCCTTGGGGCCCCTGATGCCACCGAGACACTCGCACTGTCCCTTGGCTGCCGGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR-3UTR CAA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCGAGAAGAAAGAGAACTaGCCGGGCCCCGTCGGGGAG +
Preference number: 3 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSEKKEN*PGPVGE
Trigger: CTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTC...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR-3UTR CAA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGGAGAAGAAAGAGAACTaGCCGGGCCCCGTCGGGGAG +
Preference number: 3 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLEKKEN*PGPVGE
Trigger: CTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTC...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR CCA 72 bp TCCATGGCTCTCCTCCAAGGCCCGGTCAGGGCTGTGTaGTCTGAAGAGCCCCTGCCCAGCTCACTTCTAGGA +
Preference number: 3 (lower is better)
Translates to: SMALLQGPVRAV*SEEPLPSSLLG
Trigger: TCCTAGAAGTGAGCTGGGCAGGGGCTCTTCAGACCACACAGCCCTGACCGGGCCTTGGAGGAGAGCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR CCA 72 bp ACATTCCTACGGGCTTCCAAGAGAACACACCCTAAATaGGGGCCAGGCCGTGGGCAGTGGGGGTGCACCAGG +
Preference number: 3 (lower is better)
Translates to: TFLRASKRTHPK*GPGRGQWGCTR
Trigger: CCTGGTGCACCCCCACTGCCCACGGCCTGGCCCCCATTTAGGGTGTGTTCTCTTGGAAGCCCGTAGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR GCA 72 bp TGCCCCAGGCTGAGCCCAGGCCCTTGGCTTGTCGGCTaGTCAAGAACACATTCCTACGGGCTTCCAAGAGAA +
Preference number: 3 (lower is better)
Translates to: CPRLSPGPWLVG*SRTHSYGLPRE
Trigger: TTCTCTTGGAAGCCCGTAGGAATGTGTTCTTGAGCAGCCGACAAGCCAAGGGCCTGGGCTCAGCCTGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR GCA 72 bp CTCTGGCCTCGGACAAGTTCCTCCCTCTGTCACTCATaGTCCTCAGAGACAGGGGTGGGAGCATCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: LWPRTSSSLCHS*SSETGVGASRK
Trigger: CTTTCTGGATGCTCCCACCCCTGTCTCTGAGGAGCATGAGTGACAGAGGGAGGAACTTGTCCGAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR GCA 72 bp AGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTaGTCTCTGGGATACAGGTGTGTCCTGGACGTTCAT +
Preference number: 3 (lower is better)
Translates to: RWGWGRSVSSSL*SLGYRCVLDVH
Trigger: ATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR CCA 72 bp TGGGGCCGGGAAAGGAAACAGAGGGTGTCTAGGGGATaGGCTGACACAGAGTACGGAGTTAGGACTGGCTAT +
Preference number: 3 (lower is better)
Translates to: WGRERKQRVSRG*ADTEYGVRTGY
Trigger: ATAGCCAGTCCTAACTCCGTACTCTGTGTCAGCCCATCCCCTAGACACCCTCTGTTTCCTTTCCCGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
3UTR CCA 72 bp CCTCCCTCTGTCACTCATGCTCCTCAGAGACAGGGGTaGGAGCATCCAGAAAGGACATGTCCAGCTCTGGAT +
Preference number: 3 (lower is better)
Translates to: PPSVTHAPQRQG*EHPERTCPALD
Trigger: ATCCAGAGCTGGACATGTCCTTTCTGGATGCTCCCACCCCTGTCTCTGAGGAGCATGAGTGACAGAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR CCA 72 bp GACATGTCCAGCTCTGGATCCAGATTTTCTCAGCACTaGGGTCAGGGTAAAAGGACCAGGACAGGGCTAGGC +
Preference number: 3 (lower is better)
Translates to: DMSSSGSRFSQH*GQGKRTRTGLG
Trigger: GCCTAGCCCTGTCCTGGTCCTTTTACCCTGACCCCAGTGCTGAGAAAATCTGGATCCAGAGCTGGACATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
3UTR CCA 72 bp GCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTaGGATACAGGTGTGTCCTGGACGTTCATTTTCCCA +
Preference number: 3 (lower is better)
Translates to: AGDAQSPHHFAL*DTGVSWTFIFP
Trigger: TGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCGGCTGCAGGCAGCGGTaGCGGCGTGCGCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAGCRQR*RRAPRQ
Trigger: CTGGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCC...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCGGCTGCAGGCAGCGGTaGCGGCGTGCGCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: AGALLHLELPASAPVYVCGCRQR*RRAPRQ
Trigger: CTGGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCC...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCCGCAGGAAGGTGGGCTaGCGCAGACGGCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAARRKVG*RRRLAR
Trigger: GCGGGCCAGCCGTCTGCGGCAGCCCACCTTCCTGCG...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCCCTGCGTGCCCACGCTaGCCGTGGCCGCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAPACPR*PWPRPP
Trigger: AGGAGGACGCGGCCACGGGCAGCGTGGGCACGCAGG...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCGCCGACTCTGGCAGATaGCACGCTGCCGCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSADSGR*HAAAGL
Trigger: TAGCCCCGCGGCAGCGTGCCATCTGCCAGAGTCGGC...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACGCCGCCACCGCCGCGTaGGCCCGGGGAATTGACCCA +
Preference number: 4 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDAATAA*ARGIDP
Trigger: TGGGTCAATTCCCCGGGCTCACGCGGCGGTGGCGGC...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGCGCTGCCACCATGGTaGGCCCGGGATGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAALPPW*ARDAAA
Trigger: GGCGGCGGCATCCCGGGCTCACCATGGTGGCAGCGC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCTTGCAGAGACGGCCCTaGGTGCCCACGCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAALQRRP*VPTLPV
Trigger: CACGGGCAGCGTGGGCACGCAGGGCCGTCTCTGCAA...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCCCCTCCAGGGGAGGCTaGCGTCAGAAGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAPSRGG*RQKGGD
Trigger: GTCCCCACCCTTCTGACGGCAGCCTCCCCTGGAGGG...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCGCCGCCAGGTGGGGCTaGGGACGCTCAGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAAARWG*GRSVSS
Trigger: TGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGC...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCCCTGCAGGCACCGCGTaGTCCCCATCAACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAPAGTA*SPSTPG
Trigger: GCCTGGGGTTGATGGGGACCACGCGGTGCCTGCAGG...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCCCGGTCAGGGCTGTGTaGTCTGAAGAGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSPVRAV*SEEPLP
Trigger: GGGCAGGGGCTCTTCAGACCACACAGCCCTGACCGG...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGCATGGCGCTGGGTCTaGGGCAGCGGCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEAWRWV*GSGGSW
Trigger: CCAGCTCCCGCCGCTGCCCCAGACCCAGCGCCATGC...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR TCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCCAGGGCTGTGTGGTCTaGAGAGCCCCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAQGCVV*RAPAQL
Trigger: GAGCTGGGCAGGGGCTCTTCAGACCACACAGCCCTG...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCGGTCGCAGCCGCAGTTaGTCAGGTTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSGRSRS*SGSLGC
Trigger: GCAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACC...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGAGAGACGGCCCTGCGTaGCCACGCTGCCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQRDGPA*PRCPWP
Trigger: CGGCCACGGGCAGCGTGGGCACGCAGGGCCGTCTCT...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGAGAGACGGCCCTGCGTaGCCACGCTGCCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLRDGPA*PRCPWP
Trigger: CGGCCACGGGCAGCGTGGGCACGCAGGGCCGTCTCT...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCGCCGGGCGACGTaGGGTTGCAGAGACGGCCCT +
Preference number: 4 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLPRRAT*GCRDGP
Trigger: AGGGCCGTCTCTGCAACCGCACGTCGCCCGGCGCGG...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCCCGCGCCGGGCGACGTaGGGTTGCAGAGACGGCCCT +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPPRRAT*GCRDGP
Trigger: AGGGCCGTCTCTGCAACCGCACGTCGCCCGGCGCGG...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGGTGGGCCCCGGCCGGTaGCCTCCTGCACCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLVGPGR*PPAPGA
Trigger: AGCTCCAGGTGCAGGAGGGCACCGGCCGGGGCCCAC...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTGGGTGGGTCACGGGTaGTGTTCTGCCGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSWVGHG*CSAAGG
Trigger: ACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCA...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGCGCCCCAGGCGAGGTaGACCGCACCCCCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDAPQAR*TAPPLR
Trigger: ACGGAGAGGGGGTGCGGTGCACCTCGCCTGGGGCGC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCCCGGTTGAGCGACCGTaGACCCCTGCAAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFPVERP*TPASAG
Trigger: GCCCGCGCTTGCAGGGGTCCACGGTCGCTCAACCGG...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCGCTGCCGCAGACGGCTaGCCCGCACCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFAAADG*PAPPPP
Trigger: AGGTGGAGGTGGTGCGGGCCAGCCGTCTGCGGCAGC...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCCTGCCGTCAGAAGGGTaGGGACGCAGCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSLPSEG*GRSTLV
Trigger: GACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAG...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCGCAGCGGGCGCGCCTTaGCTGCGGTCTGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPAAGAP*LRSGPP
Trigger: CGGAGGTCCAGACCGCAGCCAAGGCGCGCCCGCTGC...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTAGGGGCCGGGTCTCGTaGGCCCGGGCGCAGTTGTCG +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAARGRVS*ARAQLS
Trigger: CGACAACTGCGCCCGGGCCCACGAGACCCGGCCCCT...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409496.7
3UTR CAA 72 bp GGGAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTaGGTCGCCATCACCCCCATCTGGGCCACCCTGACC +
Preference number: 4 (lower is better)
Translates to: GRLPSEGWGRST*VAITPIWATLT
Trigger: GGTCAGGGTGGCCCAGATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTGGCTGCAGGCAGCGGTaGCGGCGTGCGCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCGCRQR*RRAPRQ
Trigger: CTGGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCC...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATCCATCTGGGCCACCCTaGCCCCCGTCTCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDPSGPP*PPSHPG
Trigger: GCCTGGGTGAGACGGGGGTCAGGGTGGCCCAGATGG...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCGGGCGGGTGCAGCCTaGACTAGGCGCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLRAGAA*TRRSRL
Trigger: CAGGCGGCTGCGCCTAGTGCAGGCTGCACCCGCCCG...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCCGCAGGAAGGTGGGCTaGCGCAGACGGCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSRRKVG*RRRLAR
Trigger: GCGGGCCAGCCGTCTGCGGCAGCCCACCTTCCTGCG...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGCGCAGGAAGGTGGGCTaGCGCAGACGGCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQRRKVG*RRRLAR
Trigger: GCGGGCCAGCCGTCTGCGGCAGCCCACCTTCCTGCG...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCCTGCGTGCCCACGCTaGCCGTGGCCGCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLPACPR*PWPRPP
Trigger: AGGAGGACGCGGCCACGGGCAGCGTGGGCACGCAGG...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGCCTGCGTGCCCACGCTaGCCGTGGCCGCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQPACPR*PWPRPP
Trigger: AGGAGGACGCGGCCACGGGCAGCGTGGGCACGCAGG...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTAGAGACGGCCCTGCGTaGCCACGCTGCCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSRDGPA*PRCPWP
Trigger: CGGCCACGGGCAGCGTGGGCACGCAGGGCCGTCTCT...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATCGGGCGACGTGCGGTTaGAGAGACGGCCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDRATCG*RDGPAC
Trigger: GCACGCAGGGCCGTCTCTGCAACCGCACGTCGCCCG...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGCGGGCGACGTGCGGTTaGAGAGACGGCCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQRATCG*RDGPAC
Trigger: GCACGCAGGGCCGTCTCTGCAACCGCACGTCGCCCG...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCGGAGCTCCCCGCTTCTaGACCCGTCTATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSGAPRF*TRLCLL
Trigger: CAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTGTGGGCCCCGGCCGGTaGCCTCCTGCACCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSVGPGR*PPAPGA
Trigger: AGCTCCAGGTGCAGGAGGGCACCGGCCGGGGCCCAC...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCGCACCAGGAGCCAGCTaGAGACCATCCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAAPGAS*RPSSLA
Trigger: GGCCAGAGAGGATGGTCTGCAGCTGGCTCCTGGTGC...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCCCACCAGTGGTACCTaGACCTGCCCCTCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPPTSGT*TCPSRG
Trigger: CCCGCGGGAGGGGCAGGTGCAGGTACCACTGGTGGG...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCGCATCGGGCCGACTCTaGCAGATGGCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFASGRL*QMARCR
Trigger: GCGGCAGCGTGCCATCTGCCAGAGTCGGCCCGATGC...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AATTTGTGTCAACATCTGTCCCCACCGCCCCAGGGCCCAGCGGCAGACCCAGCCGCTGCCGCAGACGGCTaGCCCGCACCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: NLCQHLSPPPQGPAADPAAAADG*PAPPPP
Trigger: AGGTGGAGGTGGTGCGGGCCAGCCGTCTGCGGCAGC...GGCTGGGTCTGCCGCTGGGCCCTGGGGCGGTGGGGACAGATGTTGACACAAATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCGAGCACCAAGACCCCTaGCCTTGCTCTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAEHQDP*PCSLGG
Trigger: CCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTC...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCGCGGCAGACCCAGCCTaGGAACTGGTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGALLHLELPASAPVYVCAADPA*ELVWRG
Trigger: GCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGC...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGATGGGGGATGAGGGATaGGGGCCGCAGCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEMGDEG*GPQPSP
Trigger: GGGGGATGGCTGCGGCCCCCATCCCTCATCCCCCAT...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGACCGGAGCGTGCGGTaGGAGCCGCCTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDDRSVR*EPPPGL
Trigger: AAGCCCTGGAGGCGGCTCCCACCGCACGCTCCGGTC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGGCCTTGCCTGTGGCCTaGACGGGGCTCGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQALPVA*TGLASG
Trigger: CCCCGAGGCGAGCCCCGTCCAGGCCACAGGCAAGGC...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR TCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGGCCTCACTTGCAGGTaGAGACCTCGGTGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEGLTCR*RPRCAR
Trigger: GCGAGCGCACCGAGGTCTTCACCTGCAAGTGAGGCC...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGTTGCAGAGACGGCCCTaGGTGCCCACGCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPLQRRP*VPTLPV
Trigger: CACGGGCAGCGTGGGCACGCAGGGCCGTCTCTGCAA...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCGGTGAGGAGTGGATGTaGAAAATGCCGCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSGEEWM*KMPPGS
Trigger: GGAACCCGGCGGCATTTTGCACATCCACTCCTCACC...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCCCCGTCTATGTCTGCTaGTGGCAGCACCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAPVYVC*WQHQGR
Trigger: CCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGG...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCGCACCCGTCTATGTCTaGTGCTGGCAGCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAAPVYV*CWQHQG
Trigger: GCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGC...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTAGGCTGCCTCAGCTCTaGAGGGGCAGAGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSRLPQL*RGRGPA
Trigger: GGCCGGCCCTCTGCCCCTGCAGAGCTGAGGCAGCCT...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGAGGCTGACCGGAGCGTaGGGTGGGAGCCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQRLTGA*GGSRLQ
Trigger: CTGGAGGCGGCTCCCACCGCACGCTCCGGTCAGCCT...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR GCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTCATGGTGGGCCGGCGTaGCTGGCGGGGCTGAACAGG +
Preference number: 4 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSHGGPA*LAGLNR
Trigger: CCTGTTCAGCCCCGCCAGGCACGCCGGCCCACCATG...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGCCGACTCTGGCAGATaGCACGCTGCCGCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAADSGR*HAAAGL
Trigger: TAGCCCCGCGGCAGCGTGCCATCTGCCAGAGTCGGC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCCGCCTCCGGGCCTaGCCTCACTTGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAGRLRA*PHLQVK
Trigger: CTTCACCTGCAAGTGAGGCCAGGCCCGGAGGCGGCC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCCCTGCAGGCACCGCGTaGTCCCCATCAACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPPAGTA*SPSTPG
Trigger: GCCTGGGGTTGATGGGGACCACGCGGTGCCTGCAGG...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGCCGGTCAGGGCTGTGTaGTCTGAAGAGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEPVRAV*SEEPLP
Trigger: GGGCAGGGGCTCTTCAGACCACACAGCCCTGACCGG...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGCGCGCAGCTGCCATTaGACGGGCCGCCCCTACATC +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAARSCH*TGRPYI
Trigger: GATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGTCACCGCCTTGCCTGTaGCCTGGACGGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLSPPCL*PGRGSP
Trigger: AGGCGAGCCCCGTCCAGGCCACAGGCAAGGCGGTGA...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR TCA 90 bp GAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTTGGTCGCCATCACCCCCATCAGGGCCACCACGGATaGCAGTGCTCCGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: EAAVRRVGTQHLGRHHPHQGHHG*QCSELH
Trigger: GTGAAGCTCGGAGCACTGTCATCCGTGGTGGCCCTG...ATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACGGTACTGGCACTCGTTaGTGCCCATCTGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDGTGTR*CPSAPP
Trigger: AGGGGGCGCAGATGGGCATCAACGAGTGCCAGTACC...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGCCGCGCGTTCTTCTTaGTCTCCCGAGCGTCCACGA +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEAARSS*SPERPR
Trigger: TCGTGGACGCTCGGGAGATCAAGAAGAACGCGCGGC...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCGGCCTCACTTGCAGGTaGAGACCTCGGTGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPGLTCR*RPRCAR
Trigger: GCGAGCGCACCGAGGTCTTCACCTGCAAGTGAGGCC...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCCACTCACCACCTGCCTaGCCCCCGCGGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSHSPPA*PPRQHC
Trigger: ACAGTGCTGCCGCGGGGGTCAGGCAGGTGGTGAGTG...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCACATGGGATGGAGGGTaGTGGAGAGACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSTWDGG*WRDDSQ
Trigger: CTGGGAATCGTCTCTCCATCACCCTCCATCCCATGT...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR GCA 90 bp AATTTGTGTCAACATCTGTCCCCACCGCCCCAGGGCCCAGCGGCAGACCCAGCCGCCGGGAGAAGTCGATaGCGTAACGCACGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: NLCQHLSPPPQGPAADPAAGRSR*RNARRP
Trigger: CGGCCGACGTGCGTTACGGCATCGACTTCTCCCGGC...GGCTGGGTCTGCCGCTGGGCCCTGGGGCGGTGGGGACAGATGTTGACACAAATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGGGCGACGTGCGGTTaGAGAGACGGCCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCRATCG*RDGPAC
Trigger: GCACGCAGGGCCGTCTCTGCAACCGCACGTCGCCCG...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCCCCGTCTATGTCTGCTaGTGGCAGCACCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGALLHLELPASAPVYVCPVYVC*WQHQGR
Trigger: CCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGG...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGTGGGTGGGTCACGGGTaGTGTTCTGCCGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEWVGHG*CSAAGG
Trigger: ACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCA...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCCAAGACCCCTGGCCTTaGTCTCTGGGTGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFQDPWP*SLGGSR
Trigger: CCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTG...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCAGGCTGCCTCAGCTCTaGAGGGGCAGAGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCRLPQL*RGRGPA
Trigger: GGCCGGCCCTCTGCCCCTGCAGAGCTGAGGCAGCCT...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTAGGGGCTCAGTGGGGTaGCCGGCAGCCAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSRGSVG*PAAKGQ
Trigger: CTGTCCCTTGGCTGCCGGGCACCCCACTGAGCCCCT...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGGCCGACTCTGGCAGATaGCACGCTGCCGCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQADSGR*HAAAGL
Trigger: TAGCCCCGCGGCAGCGTGCCATCTGCCAGAGTCGGC...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGGCATCGGGCCGACTCTaGCAGATGGCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQASGRL*QMARCR
Trigger: GCGGCAGCGTGCCATCTGCCAGAGTCGGCCCGATGC...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGCCGCCTCCGGGCCTaGCCTCACTTGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSGRLRA*PHLQVK
Trigger: CTTCACCTGCAAGTGAGGCCAGGCCCGGAGGCGGCC...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGTGCCCTCCTGCACCTaGAGCTCCCCGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDVPSCT*SSPLLH
Trigger: GTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGGTGCCCTCCTGCACCTaGAGCTCCCCGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQVPSCT*SSPLLH
Trigger: GTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCGCCGCCAGGTGGGGCTaGGGACGCTCAGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSAARWG*GRSVSS
Trigger: TGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGC...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCGCGGCAGACCCAGCCTaGGAACTGGTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPAADPA*ELVWRG
Trigger: GCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGC...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCCAGAGCGTCCAGGCATaGTTAGAGGCACATGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAQSVQA*LEAHGL
Trigger: CAGCCCATGTGCCTCTAACCATGCCTGGACGCTCTG...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCAGGCTGCCGGGCCTATaGACTCAGGTGTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGALLHLELPASAPVYVCRLPGL*TQVCSG
Trigger: CCCAGAACACACCTGAGTCCATAGGCCCGGCAGCCT...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACGGGGACGCAGCACCTTaGTCGCCATCACCCCCATCT +
Preference number: 4 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDGDAAP*SPSPPS
Trigger: AGATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCC...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCTTCCACCTCTCCGCCTaGGAAGCCGCGTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPFHLSA*EAASPT
Trigger: GGTGGGAGACGCGGCTTCCCAGGCGGAGAGGTGGAA...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR TCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCGGTACTGGCACTCGTTaGTGCCCATCTGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPGTGTR*CPSAPP
Trigger: AGGGGGCGCAGATGGGCATCAACGAGTGCCAGTACC...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp AATTTGTGTCAACATCTGTCCCCACCGCCCCAGGGCCCAGCGGCAGACCCAGCCGCCGCGCGTTCTTCTTaGTCTCCCGAGCGTCCACGA +
Preference number: 4 (lower is better)
Translates to: NLCQHLSPPPQGPAADPAAARSS*SPERPR
Trigger: TCGTGGACGCTCGGGAGATCAAGAAGAACGCGCGGC...GGCTGGGTCTGCCGCTGGGCCCTGGGGCGGTGGGGACAGATGTTGACACAAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGAGCTGCGCAGCTGTTTaGTGCGCAGGAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQESCAAV*CAGRWA
Trigger: AGCCCACCTTCCTGCGCATCAAACAGCTGCGCAGCT...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCCAGGGCTGTGTGGTCTaGAGAGCCCCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSQGCVV*RAPAQL
Trigger: GAGCTGGGCAGGGGCTCTTCAGACCACACAGCCCTG...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCGCCAGGCCGGGAGGGTaGCAGGATGAGGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCARPGG*QDEGGN
Trigger: GTTCCCTCCCTCATCCTGTCACCCTCCCGGCCTGGC...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCCGCACCACCTCCACCTaGACGGCCGCGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPRTTST*TAALYF
Trigger: GAAGTACAACGCGGCCGTGCAGGTGGAGGTGGTGCG...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCATGGGTGGGTCACGGGTaGTGTTCTGCCGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAAWVGHG*CSAAGG
Trigger: ACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCA...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCAAGACCCCTGGCCTTaGTCTCTGGGTGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLQDPWP*SLGGSR
Trigger: CCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTG...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATCAAGACCCCTGGCCTTaGTCTCTGGGTGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDQDPWP*SLGGSR
Trigger: CCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTG...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGAGAAGAAAGAGAACTTaGCGGGCCCCGTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQERRKRT*RAPSGS
Trigger: GCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCT...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCGTGGGCAGTGGGGGTaGACCAGGAGCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCRGQWG*TRSQLQ
Trigger: CTGCAGCTGGCTCCTGGTGCACCCCCACTGCCCACG...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCCGTCCGTCTGTCGGTaGGAACCGGCTCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLPSVCR*EPALSL
Trigger: GAGCGACAGAGCCGGTTCGCACCGACAGACGGACGG...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGGGAATTGACCCAGGCTaGGGGCCGCGACCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQGIDPG*GPRPRS
Trigger: GCTTCGAGGTCGCGGCCCCCAGCCTGGGTCAATTCC...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACTTGCTCAGGTTCCCTTaGCTGCAGGCAGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDLLRFP*LQAAVT
Trigger: CGTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAA...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCAGGGAAGGTGAGGAGTaGATGTGCAAAATGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAREGEE*MCKMPP
Trigger: CGGCGGCATTTTGCACATCCACTCCTCACCTTCCCT...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCCTGGCCTTGCTCTCTaGGTGGGTCACGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPPGLAL*VGHGCC
Trigger: ACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCCCTGGCCTTGCTCTCTaGGTGGGTCACGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPPGLAL*VGHGCC
Trigger: ACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCAGAGCACCAAGACCCCTaGCCTTGCTCTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAAEHQDP*PCSLGG
Trigger: CCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTC...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCGCCGCCAGGTGGGGCTaGGGACGCTCAGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCAARWG*GRSVSS
Trigger: TGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGC...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCCGGTCAGGGCTGTGTaGTCTGAAGAGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSPVRAV*SEEPLP
Trigger: GGGCAGGGGCTCTTCAGACCACACAGCCCTGACCGG...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGGGTCTCTGTAAACTaGAGGTGCCAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAGVSVN*RCQAGR
Trigger: CCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCGAGGCTGTCAGGGGGTaGAGGGAGCAGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSEAVRG*REQPSA
Trigger: GGCACTTGGCTGCTCCCTCCACCCCCTGACAGCCTC...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACAGAACACACCCTAAATaGGGGCCAGGCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDRTHPK*GPGRGQ
Trigger: CTGCCCACGGCCTGGCCCCCATTTAGGGTGTGTTCT...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGTGGGGCATTCACGGTaGCCCGGAGACTCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAVGHSR*PGDSER
Trigger: ACGCTCTGAGTCTCCGGGCCACCGTGAATGCCCCAC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTGTGCGAGTGTCTCGGTaGCATCAGGGGCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSVRVSR*HQGPQG
Trigger: CCCTTGGGGCCCCTGATGCCACCGAGACACTCGCAC...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGACAGTAGAAGCATGGTaGGCCGGCGTGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLTVEAW*AGVPGG
Trigger: CCCGCCAGGCACGCCGGCCCACCATGCTTCTACTGT...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCGCGACAGTAGAAGCATaGTGGGCCGGCGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSATVEA*WAGVPG
Trigger: GCCAGGCACGCCGGCCCACCATGCTTCTACTGTCGC...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR TCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGAGCTGCGCAGCTGTTTaGTGCGCAGGAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQSCAAV*CAGRWA
Trigger: AGCCCACCTTCCTGCGCATCAAACAGCTGCGCAGCT...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTGGCCTCACTTGCAGGTaGAGACCTCGGTGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCGLTCR*RPRCAR
Trigger: GCGAGCGCACCGAGGTCTTCACCTGCAAGTGAGGCC...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGTGGGACAAACATCCCTaGCCACTCACCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEWDKHP*PLTTCL
Trigger: CAGGCAGGTGGTGAGTGGTCAGGGATGTTTGTCCCA...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGCCGGGAGAAGTCGATaGCGTAACGCACGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYAGRSR*RNARRP
Trigger: CGGCCGACGTGCGTTACGGCATCGACTTCTCCCGGC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGCGCACCACCTCCACCTaGACGGCCGCGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQRTTST*TAALYF
Trigger: GAAGTACAACGCGGCCGTGCAGGTGGAGGTGGTGCG...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCCGCACCACCTCCACCTaGACGGCCGCGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSRTTST*TAALYF
Trigger: GAAGTACAACGCGGCCGTGCAGGTGGAGGTGGTGCG...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACCCGCGCCGGGCGACGTaGGGTTGCAGAGACGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDPRRAT*GCRDGP
Trigger: AGGGCCGTCTCTGCAACCGCACGTCGCCCGGCGCGG...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGCCCGTCTATGTCTGCTaGTGGCAGCACCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQPVYVC*WQHQGR
Trigger: CCTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGG...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGGGAGCTCCCCGCTTCTaGACCCGTCTATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQGAPRF*TRLCLL
Trigger: CAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCCTCACTTCTAGGACCTaGAGGCACCGCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSLTSRT*RHRVVP
Trigger: GGGGACCACGCGGTGCCTGCAGGTCCTAGAAGTGAG...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGATGGGAGCTACCTACTaGCACCCCGGGCATCCTGAT +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQEMGATY*HPGHPD
Trigger: ATCAGGATGCCCGGGGTGGCAGTAGGTAGCTCCCAT...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGCCGCCTCCAGGGCTTaGCCAAGTTGCCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYAASRA*PSCLGW
Trigger: CCAGCCAAGGCAACTTGGGCAAGCCCTGGAGGCGGC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR GCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGGAGACGAGCGCGCTaGGCGGCGACAGTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCRRRAR*AATVEA
Trigger: TGCTTCTACTGTCGCCGCGCAGCGCGCTCGTCTCCG...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCTTGCTCAGGTTCCCTTaGCTGCAGGCAGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPLLRFP*LQAAVT
Trigger: CGTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAA...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTGTGCCCTCCTGCACCTaGAGCTCCCCGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCVPSCT*SSPLLH
Trigger: GTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGGAGGAGCCTGTCCATaGCTCTCCTCCAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYGGACP*LSSKAR
Trigger: CCGGGCCTTGGAGGAGAGCCATGGACAGGCTCCTCC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACGCAGACCATCCTCTCTaGCCTCGGACAAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDADHPL*PRTSSS
Trigger: GGAGGAACTTGTCCGAGGCCAGAGAGGATGGTCTGC...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCCTGAGCCCAGGCCCTTaGCTTGTCGGCTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPLSPGP*LVGCSR
Trigger: TCTTGAGCAGCCGACAAGCCAAGGGCCTGGGCTCAG...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGTTGCTGGCAGACTTTaGGGTGGGCAGGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDVAGRL*GGQGLS
Trigger: ACTGAGCCCCTGCCCACCCCAAAGTCTGCCAGCAAC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACCGCGTCTCCCACCAGTaGTACCTGCACCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYRVSHQ*YLHLPL
Trigger: GAGGGGCAGGTGCAGGTACCACTGGTGGGAGACGCG...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCGGGGCAGACATGGGATaGAGGGTGATGGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFGADMG*RVMERR
Trigger: TCGTCTCTCCATCACCCTCCATCCCATGTCTGCCCC...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR TCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCTCCCCAATCACAATaGTGGCATCGGGCCGACTCT +
Preference number: 4 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLPPQSQ*WHRADS
Trigger: AGAGTCGGCCCGATGCCATCATTGTGATTGGGGAGG...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp AATTTGTGTCAACATCTGTCCCCACCGCCCCAGGGCCCAGCGGCAGACCCAGCCCCTCCCCAATCACAATaGTGGCATCGGGCCGACTCT +
Preference number: 4 (lower is better)
Translates to: NLCQHLSPPPQGPAADPAPPQSQ*WHRADS
Trigger: AGAGTCGGCCCGATGCCATCATTGTGATTGGGGAGG...GGCTGGGTCTGCCGCTGGGCCCTGGGGCGGTGGGGACAGATGTTGACACAAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTGCACTCGGCGCGCGCTaGCACCATGGTGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRALGAR*HHGEPG
Trigger: CCCGGGCTCACCATGGTGGCAGCGCGCGCCGAGTGC...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGGTCGCAGCCGCAGTTaGTCAGGTTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYGRSRS*SGSLGC
Trigger: GCAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCCCAGCGGCAGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCAATTTGCAGTTGCACTaGCACACCTTGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: AQRQTQPGNWSGEASRRSNLQLH*HTLVYW
Trigger: CCAGTACACCAAGGTGTGGCAGTGCAACTGCAAATT...GCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGAGTGGATGTGCAAAATaGCGCCGGGTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPSGCAK*RRVPGC
Trigger: GCACCCTGGAACCCGGCGGCATTTTGCACATCCACT...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCAGGTGAGGAGTGGATGTaGAAAATGCCGCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAAGEEWM*KMPPGS
Trigger: GGAACCCGGCGGCATTTTGCACATCCACTCCTCACC...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCGCACCCGTCTATGTCTaGTGCTGGCAGCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSAPVYV*CWQHQG
Trigger: GCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGC...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGAGCTCCCCGCTTCTaGACCCGTCTATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSGAPRF*TRLCLL
Trigger: CAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCAGAAGAAAGAGAACTTaGCGGGCCCCGTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSRRKRT*RAPSGS
Trigger: GCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCT...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCTCACTTCTAGGACCTaGAGGCACCGCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCLTSRT*RHRVVP
Trigger: GGGGACCACGCGGTGCCTGCAGGTCCTAGAAGTGAG...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATTCTGTAAACTGGAGGTaGCAGGCCGGGAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDSVNWR*QAGRVT
Trigger: TGTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGA...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGGCCTCCAGTCACAGCTaGAGGGTCTCTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQASSHS*RVSGRS
Trigger: GGACCTACCAGAGACCCTGCAGCTGTGACTGGAGGC...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACACGATTCCCAGCGCCTaGTTCCACCTCTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYTIPSA*FHLSAW
Trigger: CCAGGCGGAGAGGTGGAAGCAGGCGCTGGGAATCGT...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGTTGCTCAGGTTCCCTTaGCTGCAGGCAGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLLLRFP*LQAAVT
Trigger: CGTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAA...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGGGAACTTGGGCAGCGTaGTCCAGCAGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPGTWAA*SSRFWW
Trigger: CCACCAAAACCTGCTGGACCACGCTGCCCAAGTTCC...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGGAACTTGGGCAGCGTaGTCCAGCAGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDGTWAA*SSRFWW
Trigger: CCACCAAAACCTGCTGGACCACGCTGCCCAAGTTCC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGCTGCCGCAGACGGCTaGCCCGCACCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDAAADG*PAPPPP
Trigger: AGGTGGAGGTGGTGCGGGCCAGCCGTCTGCGGCAGC...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGAGCACCAAGACCCCTaGCCTTGCTCTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYEHQDP*PCSLGG
Trigger: CCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACAGGGTGTCTAGGGGATaGGCTGACACAGAGTACGGA +
Preference number: 4 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDRVSRG*ADTEYG
Trigger: TCCGTACTCTGTGTCAGCCCATCCCCTAGACACCCT...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCGTCCTTGTGCCACTCTaGGCCTCAGAGTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFVLVPL*ASEFPS
Trigger: AGATGGGAACTCTGAGGCCCAGAGTGGCACAAGGAC...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCAAGTGCCTCAAGGCATaGGAGCTACCTACTGCCACC +
Preference number: 4 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFKCLKA*ELPTAT
Trigger: GGTGGCAGTAGGTAGCTCCCATGCCTTGAGGCACTT...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCCTCCCCAATCACAATaGTGGCATCGGGCCGACTCT +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLPPQSQ*WHRADS
Trigger: AGAGTCGGCCCGATGCCATCATTGTGATTGGGGAGG...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGTGTTATGCAGGTTCATaGGGCGCCGCGCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQCYAGS*GAARSS
Trigger: AGAAGAACGCGCGGCGCCTCATGAACCTGCATAACA...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCATGTTATGCAGGTTCATaGGGCGCCGCGCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAACYAGS*GAARSS
Trigger: AGAAGAACGCGCGGCGCCTCATGAACCTGCATAACA...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACTGGCAGATGGCACGCTaGCGCGGGGCTAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDWQMAR*RGARPG
Trigger: TCCTGGCCTAGCCCCGCGGCAGCGTGCCATCTGCCA...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCCCTACTCGGAGCTCTTaGCCGAAGACGGTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSPTRSS*PKTVFS
Trigger: CGAGAAGACCGTCTTCGGGCAAGAGCTCCGAGTAGG...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTCACTTGCACTCCAGCTaGATCCGGTCCTCTAGAACC +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAHLHSS*IRSSRT
Trigger: GGTTCTAGAGGACCGGATGCAGCTGGAGTGCAAGTG...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATCACTTGCACTCCAGCTaGATCCGGTCCTCTAGAACC +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDHLHSS*IRSSRT
Trigger: GGTTCTAGAGGACCGGATGCAGCTGGAGTGCAAGTG...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTAGCAGGTTTTGGTGGTaGAGGAGCCAGACACGCCGT +
Preference number: 4 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSSRFWW*RSQTRR
Trigger: ACGGCGTGTCTGGCTCCTGCACCACCAAAACCTGCT...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGGGTGAGGAGTGGATGTaGAAAATGCCGCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLGEEWM*KMPPGS
Trigger: GGAACCCGGCGGCATTTTGCACATCCACTCCTCACC...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCGTCTCCTCATCACTTTaGTCTCTGGGATACAGGTGT +
Preference number: 4 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAAVSSSL*SLGYRC
Trigger: ACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGAC...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGAGGGAGCAGCCAAGTaGCTCAAGGCATGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSEGAAK*LKAWEL
Trigger: TAGCTCCCATGCCTTGAGGCACTTGGCTGCTCCCTC...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTGTTCCTTGCAGAGGCTaGCGGGCCTATGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCVPCRG*RAYGLR
Trigger: CCTGAGTCCATAGGCCCGGCAGCCTCTGCAAGGAAC...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGTTAACCAGGTTCCTTaGAGAGGCTGCCGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAVNQVP*RGCRAY
Trigger: ATAGGCCCGGCAGCCTCTGCAAGGAACCTGGTTAAC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGCATCGGGCCGACTCTaGCAGATGGCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDASGRL*QMARCR
Trigger: GCGGCAGCGTGCCATCTGCCAGAGTCGGCCCGATGC...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCCGTCCGAAGCGGAACTaGTACTGGCACTCGTTGATG +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPRPKRN*YWHSLM
Trigger: CATCAACGAGTGCCAGTACCAGTTCCGCTTCGGACG...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGCCAGGTCTGTCTCCATaGGCTTCTGATAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQPGLSP*ASDSCA
Trigger: TGCGCAGCTATCAGAAGCCCATGGAGACAGACCTGG...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGAGGGAAGGTGAGGAGTaGATGTGCAAAATGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQREGEE*MCKMPP
Trigger: CGGCGGCATTTTGCACATCCACTCCTCACCTTCCCT...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGGTCTATGTCTGCTGCTaGCAGCACCAAGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQVYVCC*QHQGRE
Trigger: TTCCCTGCCTTGGTGCTGCCAGCAGCAGACATAGAC...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AATTTGTGTCAACATCTGTCCCCACCGCCCCAGGGCCCAGCGGCAGACCCAGCCGTCTATGTCTGCTGCTaGCAGCACCAAGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NLCQHLSPPPQGPAADPAVYVCC*QHQGRE
Trigger: TTCCCTGCCTTGGTGCTGCCAGCAGCAGACATAGAC...GGCTGGGTCTGCCGCTGGGCCCTGGGGCGGTGGGGACAGATGTTGACACAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGAGGGTGTCTAGGGGATaGGCTGACACAGAGTACGGA +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQRVSRG*ADTEYG
Trigger: TCCGTACTCTGTGTCAGCCCATCCCCTAGACACCCT...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGAAGGAAAGACGGCATaGAGGAGCCTGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDEGKTA*RSLSMA
Trigger: AGCCATGGACAGGCTCCTCCATGCCGTCTTTCCTTC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTGGCAGATGGCACGCTaGCGCGGGGCTAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRWQMAR*RGARPG
Trigger: TCCTGGCCTAGCCCCGCGGCAGCGTGCCATCTGCCA...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGCCGGGAGAAGTCGATaGCGTAACGCACGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDAGRSR*RNARRP
Trigger: CGGCCGACGTGCGTTACGGCATCGACTTCTCCCGGC...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGCACTTGCACTCCAGCTaGATCCGGTCCTCTAGAACC +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQHLHSS*IRSSRT
Trigger: GGTTCTAGAGGACCGGATGCAGCTGGAGTGCAAGTG...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTAGCAGGTTTTGGTGGTaGAGGAGCCAGACACGCCGT +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCSRFWW*RSQTRR
Trigger: ACGGCGTGTCTGGCTCCTGCACCACCAAAACCTGCT...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTGTGGGCCCCGGCCGGTaGCCTCCTGCACCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIVGPGR*PPAPGA
Trigger: AGCTCCAGGTGCAGGAGGGCACCGGCCGGGGCCCAC...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCTCCCTCTGTCACTCATaGTCCTCAGAGACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSSLCHS*SSETGV
Trigger: CACCCCTGTCTCTGAGGAGCATGAGTGACAGAGGGA...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTCGGGCGCGCCTTGGCTaGGGTCTGGACCTCCGTCCG +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIRARLG*GLDLRP
Trigger: CGGACGGAGGTCCAGACCGCAGCCAAGGCGCGCCCG...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTCCTGCAGGCACCGCGTaGTCCCCATCAACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRPAGTA*SPSTPG
Trigger: GCCTGGGGTTGATGGGGACCACGCGGTGCCTGCAGG...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGGGAACGAAGGACTCCTaGAACCTGACGTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPGTKDS*NLTWVI
Trigger: TATCACCCACGTCAGGTTCCAGGAGTCCTTCGTTCC...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGGATTCCAGCTTTTATTaGGCCGAGCACTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQDSSFY*AEHSPP
Trigger: TGGAGGGGAGTGCTCGGCCCAATAAAAGCTGGAATC...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTGAGTGCAGGCCCCAATaGGGCTGTCAGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRECRPQ*GCQGVE
Trigger: CTCCACCCCCTGACAGCCTCATTGGGGCCTGCACTC...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCAGGCTGCCTCAGCTCTaGAGGGGCAGAGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFRLPQL*RGRGPA
Trigger: GGCCGGCCCTCTGCCCCTGCAGAGCTGAGGCAGCCT...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCCTTGGCTTGTCGGCTaGTCAAGAACACATTCCTAC +
Preference number: 4 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPPWLVG*SRTHSY
Trigger: GTAGGAATGTGTTCTTGAGCAGCCGACAAGCCAAGG...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACAGTGGTACCTGCACCTaGCCCTCCCGCGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDSGTCT*PSRGSV
Trigger: AACAGACCCGCGGGAGGGGCAGGTGCAGGTACCACT...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGTCCGAAGCGGAACTaGTACTGGCACTCGTTGATG +
Preference number: 4 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCRPKRN*YWHSLM
Trigger: CATCAACGAGTGCCAGTACCAGTTCCGCTTCGGACG...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGTCTATGTCTGCTGCTaGCAGCACCAAGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYVYVCC*QHQGRE
Trigger: TTCCCTGCCTTGGTGCTGCCAGCAGCAGACATAGAC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACCCTGGCCTTGCTCTCTaGGTGGGTCACGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDPGLAL*VGHGCC
Trigger: ACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTGCGGCAGACCCAGCCTaGGAACTGGTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRAADPA*ELVWRG
Trigger: GCCTCTCCAGACCAGTTCCCAGGCTGGGTCTGCCGC...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACTGGGCAGGAGAAAGGTaGAAGCCTCCAGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYWAGER*KPPVTA
Trigger: AGCTGTGACTGGAGGCTTCCACCTTTCTCCTGCCCA...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGAGATTTTCTCAGCACTaGGGTCAGGGTAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: RPLALLSGWVTGAVLPQERFSQH*GQGKRT
Trigger: GGTCCTTTTACCCTGACCCCAGTGCTGAGAAAATCT...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATCTGGGTTCAGGAATGTaGAAATACGACTCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDLGSGM*KYDSEQ
Trigger: CTGCTCCGAGTCGTATTTCCACATTCCTGAACCCAG...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR TCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTACCTCGAAGCCCGGTTaGGCGACCGTGGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFITSKPG*ATVDPC
Trigger: GCAGGGGTCCACGGTCGCTCAACCGGGCTTCGAGGT...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTGGTACTGGCACTCGTTaGTGCCCATCTGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRGTGTR*CPSAPP
Trigger: AGGGGGCGCAGATGGGCATCAACGAGTGCCAGTACC...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACAGCTGCGCAGCTGTTTaGTGCGCAGGAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDSCAAV*CAGRWA
Trigger: AGCCCACCTTCCTGCGCATCAAACAGCTGCGCAGCT...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGCCCCAAGGGTCTGTTaGAGCAGGAGGAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDAPRVC*SRRSLV
Trigger: AACCAGGCTCCTCCTGCTTCAACAGACCCTTGGGGC...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGCCTCTAGAACCTTCCTaGCGGCCTCATTGTTATGCA +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQPLEPS*RPHCYA
Trigger: TGCATAACAATGAGGCCGGCAGGAAGGTTCTAGAGG...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATAGTGGAATTTGCAGTTaGACTGCCACACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDSGICS*TATPWC
Trigger: ACACCAAGGTGTGGCAGTGCAACTGCAAATTCCACT...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGAGTGGAATTTGCAGTTaGACTGCCACACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLSGICS*TATPWC
Trigger: ACACCAAGGTGTGGCAGTGCAACTGCAAATTCCACT...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACAGAAGAAAGAGAACTTaGCGGGCCCCGTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDRRKRT*RAPSGS
Trigger: GCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCT...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGCAGCCAAGGGACAGTaGGAGTGTCTCGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDAAKGQ*ECLGGI
Trigger: GATGCCACCGAGACACTCGCACTGTCCCTTGGCTGC...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCGATACAGGTGTGTCCTaGACGTTCATTTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PREKKENLPGPVGEHQDPDTGVS*TFIFPE
Trigger: CTCTGGGAAAATGAACGTCCAGGACACACCTGTATC...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGATACAGGTGTGTCCTaGACGTTCATTTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAADTGVS*TFIFPE
Trigger: CTCTGGGAAAATGAACGTCCAGGACACACCTGTATC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCATCACTTTGCTCTCTaGGATACAGGTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLHHFAL*DTGVSW
Trigger: CCAGGACACACCTGTATCCCAGAGAGCAAAGTGATG...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCGACTCAGGTGTGTTCTaGGACTTGGGGAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCDSGVF*DLGKVR
Trigger: CCTTACCTTCCCCAAGTCCCAGAACACACCTGAGTC...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCGCCATCACCCCCATCTaGGCCACCCTGACCCCCGTC +
Preference number: 4 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFAITPI*ATLTPV
Trigger: GACGGGGGTCAGGGTGGCCCAGATGGGGGTGATGGC...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTCAGGGCTGTGTGGTCTaGAGAGCCCCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIQGCVV*RAPAQL
Trigger: GAGCTGGGCAGGGGCTCTTCAGACCACACAGCCCTG...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCTCTAGAACCTTCCTaGCGGCCTCATTGTTATGCA +
Preference number: 4 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCPLEPS*RPHCYA
Trigger: TGCATAACAATGAGGCCGGCAGGAAGGTTCTAGAGG...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACAGCAGGTTTTGGTGGTaGAGGAGCCAGACACGCCGT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDSRFWW*RSQTRR
Trigger: ACGGCGTGTCTGGCTCCTGCACCACCAAAACCTGCT...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGAGTGGAATTTGCAGTTaGACTGCCACACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQSGICS*TATPWC
Trigger: ACACCAAGGTGTGGCAGTGCAACTGCAAATTCCACT...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGGAACTTGGGCAGCGTaGTCCAGCAGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDGTWAA*SSRFWW
Trigger: CCACCAAAACCTGCTGGACCACGCTGCCCAAGTTCC...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAAGGCCGCCTCCGGGCCTaGCCTCACTTGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREGRLRA*PHLQVK
Trigger: CTTCACCTGCAAGTGAGGCCAGGCCCGGAGGCGGCC...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTGATACAGGTGTGTCCTaGACGTTCATTTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSDTGVS*TFIFPE
Trigger: CTCTGGGAAAATGAACGTCCAGGACACACCTGTATC...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCGGACATGTCCAGCTCTaGATCCAGATTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TQPGNWSGEASRRSFSVSGHVQL*IQIFSA
Trigger: TGCTGAGAAAATCTGGATCCAGAGCTGGACATGTCC...GGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR TCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACCAGGGCCACCACGGATaGCAGTGCTCTGTAAAATGG +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDQGHHG*QCSVKW
Trigger: CCATTTTACAGAGCACTGTCATCCGTGGTGGCCCTG...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR GCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTGGTCGCAGCCGCAGTTaGTCAGGTTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIGRSRS*SGSLGC
Trigger: GCAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACC...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACCGTCCGAAGCGGAACTaGTACTGGCACTCGTTGATG +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDRPKRN*YWHSLM
Trigger: CATCAACGAGTGCCAGTACCAGTTCCGCTTCGGACG...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAAGCCTTGGCTGCGGTCTaGACCTCCGTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREALAAV*TSVRLS
Trigger: CGACAGACGGACGGAGGTCCAGACCGCAGCCAAGGC...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR GCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAACTCACTTCTAGGACCTaGAGGCACCGCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQRELTSRT*RHRVVP
Trigger: GGGGACCACGCGGTGCCTGCAGGTCCTAGAAGTGAG...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACACAATCTTGGCTCATTaGAACCTCCACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDTILAH*NLHLPG
Trigger: ACCCGGGAGGTGGAGGTTGCAATGAGCCAAGATTGT...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTCTCTGTCGCTCGCTCTaGCTCACTTCTCCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRLCRSL*LTSPSL
Trigger: GAGACTTGGAGAAGTGAGCCAGAGCGAGCGACAGAG...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR GCA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCAGTGGATGTGCAAAATaGCGCCGGGTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFSGCAK*RRVPGC
Trigger: GCACCCTGGAACCCGGCGGCATTTTGCACATCCACT...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACCAAGTTGGAATACAGTaGCACAATCTTGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYQVGIQ*HNLGSL
Trigger: CAATGAGCCAAGATTGTGCCACTGTATTCCAACTTG...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTATGGTTAGAGGCACATaGGCTGGACCACAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIMVRGT*AGPQGQ
Trigger: CTGGCCCTGTGGTCCAGCCCATGTGCCTCTAACCAT...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACAATTTGCAGTTGCACTaGCACACCTTGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDNLQLH*HTLVYW
Trigger: CCAGTACACCAAGGTGTGGCAGTGCAACTGCAAATT...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTCTCCTCATCACTTTaGTCTCTGGGATACAGGTGT +
Preference number: 4 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDVSSSL*SLGYRC
Trigger: ACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGAC...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCCCAGGTCTGTCTCCATaGGCTTCTGATAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFPGLSP*ASDSCA
Trigger: TGCGCAGCTATCAGAAGCCCATGGAGACAGACCTGG...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTCATCACTTTGCTCTCTaGGATACAGGTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRHHFAL*DTGVSW
Trigger: CCAGGACACACCTGTATCCCAGAGAGCAAAGTGATG...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTAGGGTGTCTAGGGGATaGGCTGACACAGAGTACGGA +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIRVSRG*ADTEYG
Trigger: TCCGTACTCTGTGTCAGCCCATCCCCTAGACACCCT...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTCTAAGTAGCTGCCGCTaGACAGGAGGAGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRLSSCR*TGGERS
Trigger: AGATCTTTCTCCTCCTGTCCAGCGGCAGCTACTTAG...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR TCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAATGTTATGCAGGTTCATaGGGCGCCGCGCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQRECYAGS*GAARSS
Trigger: AGAAGAACGCGCGGCGCCTCATGAACCTGCATAACA...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTACAGTGCTAAGTAGCTaGCGCTGGACAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QSPHHFALWDTGVSWTFITVLSS*RWTGGE
Trigger: TTCTCCTCCTGTCCAGCGGCAGCTACTTAGCACTGT...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAACCAGGTCTGTCTCCATaGGCTTCTGATAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREPGLSP*ASDSCA
Trigger: TGCGCAGCTATCAGAAGCCCATGGAGACAGACCTGG...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR TCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAAGAATCTTGTTGCAGATaGTGTTGGCTCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREESCCR*CWLPGP
Trigger: TGGCCCTGGGAGCCAACATCATCTGCAACAAGATTC...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAACATCACTTTGCTCTCTaGGATACAGGTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREHHFAL*DTGVSW
Trigger: CCAGGACACACCTGTATCCCAGAGAGCAAAGTGATG...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR GCA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAAGTCTCCTCATCACTTTaGTCTCTGGGATACAGGTGT +
Preference number: 4 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREVSSSL*SLGYRC
Trigger: ACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGAC...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS GCA 90 bp GCGCTAGGGGCCGGGTCTCGTGGGCCCGGGCGCAGTTGTCGCCCGTaGCCCGCCGCTAGGGCCGCGCATGGCGCTGGGTCTGGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: ALGAGSRGPGRSCRP*PAARAAHGAGSGAA
Trigger: CGCTGCCCCAGACCCAGCGCCATGCGCGGCCCTAGCGGCGGGGCACGGGCGACAACTGCGCCCGGGCCCACGAGACCCGGCCCCTAGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS TCA 90 bp GGCGCGGCTGGCGGGCGGGTGCAGCCTGCACTAGGCGCAGCCGCCTaGGGCCGTGAGCGCCTCGCCGAGCGCCGCGGCGGCCAATGTGTC +
Preference number: 5 (lower is better)
Translates to: GAAGGRVQPALGAAA*GRERLAERRGGQCV
Trigger: GACACATTGGCCGCCGCGGCGCTCGGCGAGGCGCTCACGGCCTCAGGCGGCTGCGCCTAGTGCAGGCTGCACCCGCCCGCCAGCCGCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS TCA 90 bp CGCGGCGACAGTAGAAGCATGGTGGGCCGGCGTGCCTGGCGGGGCTaGACAGGCTCCGCGGGCCGGGCGCCTGGGCCAGCTGAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RGDSRSMVGRRAWRG*TGSAGRAPGPAEAG
Trigger: CCCGGCCTCAGCTGGCCCAGGCGCCCGGCCCGCGGAGCCTGTTCAGCCCCGCCAGGCACGCCGGCCCACCATGCTTCTACTGTCGCCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS TCA 90 bp TGGCGGGCGGGTGCAGCCTGCACTAGGCGCAGCCGCCTGAGGCCGTaGGCGCCTCGCCGAGCGCCGCGGCGGCCAATGTGTCCGCACTTG +
Preference number: 5 (lower is better)
Translates to: WRAGAACTRRSRLRP*APRRAPRRPMCPHL
Trigger: CAAGTGCGGACACATTGGCCGCCGCGGCGCTCGGCGAGGCGCTCACGGCCTCAGGCGGCTGCGCCTAGTGCAGGCTGCACCCGCCCGCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS CCA 90 bp AATAGACGGAGACGAGCGCGCTGCGCGGCGACAGTAGAAGCATGGTaGGCCGGCGTGCCTGGCGGGGCTGAACAGGCTCCGCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: NRRRRARCAATVEAW*AGVPGGAEQAPRAG
Trigger: CCCGGCCCGCGGAGCCTGTTCAGCCCCGCCAGGCACGCCGGCCCACCATGCTTCTACTGTCGCCGCGCAGCGCGCTCGTCTCCGTCTATT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CCA 90 bp GGCAATAGACGGAGACGAGCGCGCTGCGCGGCGACAGTAGAAGCATaGTGGGCCGGCGTGCCTGGCGGGGCTGAACAGGCTCCGCGGGCC +
Preference number: 5 (lower is better)
Translates to: GNRRRRARCAATVEA*WAGVPGGAEQAPRA
Trigger: GGCCCGCGGAGCCTGTTCAGCCCCGCCAGGCACGCCGGCCCACCATGCTTCTACTGTCGCCGCGCAGCGCGCTCGTCTCCGTCTATTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 90 bp TCGCTCGCTCTGGCTCACTTCTCCAAGTCTCCCGAGGCGCGCAGCTaGCATTGGACGGGCCGCCCCTACATCCGCCTCCTCCCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: SLALAHFSKSPEARS*HWTGRPYIRLLPRR
Trigger: CCGCCGGGGGAGGAGGCGGATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGCCTCGGGAGACTTGGAGAAGTGAGCCAGAGCGAGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 90 bp CTCTCCGCCTGGGAAGCCGCGTCTCCCACCAGTGGTACCTGCACCTaGCCCTCCCGCGGGTCTGTTCACCGCCTTGCCTGTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSAWEAASPTSGTCT*PSRGSVHRLACGLD
Trigger: GTCCAGGCCACAGGCAAGGCGGTGAACAGACCCGCGGGAGGGGCAGGTGCAGGTACCACTGGTGGGAGACGCGGCTTCCCAGGCGGAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS CCA 90 bp CGCCTGCTTCCACCTCTCCGCCTGGGAAGCCGCGTCTCCCACCAGTaGTACCTGCACCTGCCCCTCCCGCGGGTCTGTTCACCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RLLPPLRLGSRVSHQ*YLHLPLPRVCSPPC
Trigger: GCAAGGCGGTGAACAGACCCGCGGGAGGGGCAGGTGCAGGTACCACTGGTGGGAGACGCGGCTTCCCAGGCGGAGAGGTGGAAGCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CAA 90 bp CTCCAGGGGGAAGGGGGTCTCTGTAAACTGGAGGTGCCAGGCCGGGAGGGTGACCCGGGCGACGTGCGGTaGCAGAGACGGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: LQGEGGLCKLEVPGREGDPGDVR*QRRPCV
Trigger: CACGCAGGGCCGTCTCTGCAACCGCACGTCGCCCGG...GTCACCCTCCCGGCCTGGCACCTCCAGTTTACAGAGACCCCCTTCCCCCTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCCCGGGCGACGTGCGGTaGCAGAGACGGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFPGDVR*QRRPCV
Trigger: CACGCAGGGCCGTCTCTGCAACCGCACGTCGCCCGG...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS GCA 90 bp CCGCAGTTGCTCAGGTTCCCTTGGCTGCAGGCAGCGGTGACGGCGTaGGCCACGCCAGCCGCGGTGATGGCGTACGTGAAGGCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: PQLLRFPWLQAAVTA*ATPAAVMAYVKAAS
Trigger: TGAGGCTGCCTTCACGTACGCCATCACCGCGGCTGGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAACTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
CDS GCA 90 bp TTCCACCTCTCCGCCTGGGAAGCCGCGTCTCCCACCAGTGGTACCTaGACCTGCCCCTCCCGCGGGTCTGTTCACCGCCTTGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: FHLSAWEAASPTSGT*TCPSRGSVHRLACG
Trigger: GCCACAGGCAAGGCGGTGAACAGACCCGCGGGAGGGGCAGGTGCAGGTACCACTGGTGGGAGACGCGGCTTCCCAGGCGGAGAGGTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CAA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCGGGCGACGTGCGGTaGCAGAGACGGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAAPGDVR*QRRPCV
Trigger: CACGCAGGGCCGTCTCTGCAACCGCACGTCGCCCGG...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGGGCAGCGGGCGCGCCTaGGCTGCGGTCTGGACCTCC +
Preference number: 5 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLGSGRA*AAVWTS
Trigger: GGAGGTCCAGACCGCAGCCAAGGCGCGCCCGCTGCC...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 90 bp GCGGGCGCGCCTTGGCTGCGGTCTGGACCTCCGTCCGTCTGTCGGTaGGAACCGGCTCTGTCGCTCGCTCTGGCTCACTTCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: AGAPWLRSGPPSVCR*EPALSLALAHFSKS
Trigger: AGACTTGGAGAAGTGAGCCAGAGCGAGCGACAGAGCCGGTTCGCACCGACAGACGGACGGAGGTCCAGACCGCAGCCAAGGCGCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CCA 90 bp GCTCTGGCTCACTTCTCCAAGTCTCCCGAGGCGCGCAGCTGCCATTaGACGGGCCGCCCCTACATCCGCCTCCTCCCCCGGCGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: ALAHFSKSPEARSCH*TGRPYIRLLPRRVF
Trigger: AAAAACCCGCCGGGGGAGGAGGCGGATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGCCTCGGGAGACTTGGAGAAGTGAGCCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 90 bp ACAGGAGGAGAAAGATCTGCGGGCAATAGACGGAGACGAGCGCGCTaGGCGGCGACAGTAGAAGCATGGTGGGCCGGCGTGCCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: TGGERSAGNRRRRAR*AATVEAWWAGVPGG
Trigger: CCCGCCAGGCACGCCGGCCCACCATGCTTCTACTGTCGCCGCGCAGCGCGCTCGTCTCCGTCTATTGCCCGCAGATCTTTCTCCTCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CAA 90 bp GAGGCTGCCGTCAGAAGGGTGGGGACGCAGCACCTTGGTCGCCATCACCCCCATCCAATGTGTCCGCACTaGTCGGCCGCCCCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: EAAVRRVGTQHLGRHHPHPMCPH*SAAPGD
Trigger: GTCACCTGGGGCGGCCGACAAGTGCGGACACATTGG...ATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCACCCTTCTGACGGCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCCGGGCCTGGCCTCACTaGCAGGTGAAGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFRAWPH*QVKTSV
Trigger: CACCGAGGTCTTCACCTGCAAGTGAGGCCAGGCCCG...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCGAGAAGAAAGAGAACTaGCCGGGCCCCGTCGGGGAG +
Preference number: 5 (lower is better)
Translates to: AGALLHLELPASAPVYVCEKKEN*PGPVGE
Trigger: CTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTC...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS CCA 90 bp GACCTCCGTCCGTCTGTCGGTGCGAACCGGCTCTGTCGCTCGCTCTaGCTCACTTCTCCAAGTCTCCCGAGGCGCGCAGCTGCCATTGGA +
Preference number: 5 (lower is better)
Translates to: DLRPSVGANRLCRSL*LTSPSLPRRAAAIG
Trigger: TCCAATGGCAGCTGCGCGCCTCGGGAGACTTGGAGAAGTGAGCCAGAGCGAGCGACAGAGCCGGTTCGCACCGACAGACGGACGGAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CAA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGGACCTCGAAGCCCGGTaGAGCGACCGTGGACCCCTG +
Preference number: 5 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLDLEAR*SDRGPL
Trigger: CAGGGGTCCACGGTCGCTCAACCGGGCTTCGAGGTC...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp GGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGCCGCCTTGTTGCAGATGATGTaGGCTCCCAGGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: GEEWMCKMPPGSRVPAAALLQMM*APRATT
Trigger: CGTGGTGGCCCTGGGAGCCAACATCATCTGCAACAA...GGCGGCCGCGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCCCCTACTCGGAGCTCTaGCCCGAAGACGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: AGALLHLELPASAPVYVCPYSEL*PEDGLL
Trigger: GAGAAGACCGTCTTCGGGCAAGAGCTCCGAGTAGGG...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCGGTCGCAGCCGCAGTaGCTCAGGTTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPRSQPQ*LRFPWL
Trigger: CAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACCG...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGCGGTCGCAGCCGCAGTaGCTCAGGTTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQRSQPQ*LRFPWL
Trigger: CAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACCG...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp AATTTGTGTCAACATCTGTCCCCACCGCCCCAGGGCCCAGCGGCAGACCCAGCCCGGTCGCAGCCGCAGTaGCTCAGGTTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: NLCQHLSPPPQGPAADPARSQPQ*LRFPWL
Trigger: CAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACCG...GGCTGGGTCTGCCGCTGGGCCCTGGGGCGGTGGGGACAGATGTTGACACAAATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATCGGGCCTGGCCTCACTaGCAGGTGAAGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDRAWPH*QVKTSV
Trigger: CACCGAGGTCTTCACCTGCAAGTGAGGCCAGGCCCG...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp CCCAGAGAGAAGAAAGAGAACTTGCCGGGCCCCGTCGGGGAGCACCAAGACCCCCGGGCCTGGCCTCACTaGCAGGTGAAGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: PREKKENLPGPVGEHQDPRAWPH*QVKTSV
Trigger: CACCGAGGTCTTCACCTGCAAGTGAGGCCAGGCCCG...GGGGTCTTGGTGCTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTCTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCAGGGAAGGTGAGGAGTGGATGTGCAAAATGCCGCCGGGTTCCAGGGTGCCCGCCAAGACCCCTGGCCTaGCTCTCTGGGTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: AGKVRSGCAKCRRVPGCPPRPLA*LSGWVT
Trigger: CGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGG...CGGGCACCCTGGAACCCGGCGGCATTTTGCACATCCACTCCTCACCTTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCAAGACCCCTGGCCTaGCTCTCTGGGTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: GAPRPLALLSGWVTGAVLPRPLA*LSGWVT
Trigger: CGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGG...CAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTGGTCTGTTCACCGCCTaGCCTGTGGCCTGGACGGGG +
Preference number: 5 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSGLFTA*PVAWTG
Trigger: CCCCGTCCAGGCCACAGGCAAGGCGGTGAACAGACC...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CAA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCATGGTACTGGCACTCGTaGATGCCCATCTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAAWYWHS*MPICAP
Trigger: GGGGGCGCAGATGGGCATCAACGAGTGCCAGTACCA...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp CCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGGTGATGTTGCTCAGGTTCCCTaGGCTGCAGGCAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: PGLALWVGHGCCSAAGGDVAQVP*AAGSGD
Trigger: GTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAAC...ATCACCTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCCGGTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCCTTCCAGCCCTCGGCTaGGTTGTAGTAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: AGALLHLELPASAPVYVCLPALG*VVVALL
Trigger: AAGCAGGGCTACTACAACCAAGCCGAGGGCTGGAAG...GCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCGCCGCGCGTTCTTCTaGATCTCCCGAGCGTCCACG +
Preference number: 5 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSRRAFF*ISRAST
Trigger: CGTGGACGCTCGGGAGATCAAGAAGAACGCGCGGCG...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCCAAGACCCCTGGCCTaGCTCTCTGGGTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLPRPLA*LSGWVT
Trigger: CGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGG...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GTGCCCTCCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGAGAAGAAAGAGAACTaGCCGGGCCCCGTCGGGGAG +
Preference number: 5 (lower is better)
Translates to: VPSCTWSSPLLHPSMSAAEKKEN*PGPVGE
Trigger: CTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTC...AGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGGAGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGGCCCAGGCCCTTGGCTaGTCGGCTGCTCAAGAACAC +
Preference number: 5 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQAQALG*SAAQEH
Trigger: GTGTTCTTGAGCAGCCGACAAGCCAAGGGCCTGGGC...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTTGGGGACGCAGCACCTaGGTCGCCATCACCCCCATC +
Preference number: 5 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSWGRST*VAITPI
Trigger: GATGGGGGTGATGGCGACCAAGGTGCTGCGTCCCCA...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS TCA 90 bp ACACCAGGTCTGTCTCCATGGGCTTCTGATAGCTGCGCAGCTGTTTaGTGCGCAGGAAGGTGGGCTGCCGCAGACGGCTGGCCCGCACCA +
Preference number: 5 (lower is better)
Translates to: TPGLSPWASDSCAAV*CAGRWAAADGWPAP
Trigger: TGGTGCGGGCCAGCCGTCTGCGGCAGCCCACCTTCCTGCGCATCAAACAGCTGCGCAGCTATCAGAAGCCCATGGAGACAGACCTGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp CTGTGTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGGTTGCTCAGGTTCCCTaGGCTGCAGGCAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: LCPCRQVGLGTLSLLITLVAQVP*AAGSGD
Trigger: GTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAAC...CAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp AGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTGCCGCAGGAGCTTCCAGCCCTCGGCTaGGTTGTAGTAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RPLALLSGWVTGAVLPQELPALG*VVVALL
Trigger: AAGCAGGGCTACTACAACCAAGCCGAGGGCTGGAAG...CTCCTGCGGCAGAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACCGCCGCGCGTTCTTCTaGATCTCCCGAGCGTCCACG +
Preference number: 5 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYRRAFF*ISRAST
Trigger: CGTGGACGCTCGGGAGATCAAGAAGAACGCGCGGCG...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GTCCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCCCTACTCGGAGCTCTaGCCCGAAGACGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VHAARWGWGRSVSSSLCSPYSEL*PEDGLL
Trigger: GAGAAGACCGTCTTCGGGCAAGAGCTCCGAGTAGGG...AGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGACCTGCACGGCCGCGTaGTACTTCTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQTCTAA*YFSFSR
Trigger: CCTGCTGAAGGAGAAGTACAACGCGGCCGTGCAGGT...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGAGAAGAAAGAGAACTaGCCGGGCCCCGTCGGGGAG +
Preference number: 5 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYEKKEN*PGPVGE
Trigger: CTCCCCGACGGGGCCCGGCAAGTTCTCTTTCTTCTC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp CCTGCACCTGGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCAGGTGTGTTCTGGGACTaGGGGAAGGTAAGGGGATGG +
Preference number: 5 (lower is better)
Translates to: PAPGAPRFCTRLCLLLAAGVFWD*GKVRGW
Trigger: CCATCCCCTTACCTTCCCCAAGTCCCAGAACACACC...TGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCCAGGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACCCCTACTCGGAGCTCTaGCCCGAAGACGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYPYSEL*PEDGLL
Trigger: GAGAAGACCGTCTTCGGGCAAGAGCTCCGAGTAGGG...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTACCTGCACGGCCGCGTaGTACTTCTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCTCTAA*YFSFSR
Trigger: CCTGCTGAAGGAGAAGTACAACGCGGCCGTGCAGGT...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCACCTGCACGGCCGCGTaGTACTTCTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCTCTAA*YFSFSR
Trigger: CCTGCTGAAGGAGAAGTACAACGCGGCCGTGCAGGT...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACGTCTCTGGTAGGTCCTaGTGCCACTCTGGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: ARWGWGRSVSSSLCSLGYVSGRS*CHSGPQ
Trigger: CTGAGGCCCAGAGTGGCACAAGGACCTACCAGAGAC...GTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp AGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCTTGTTGCAGATGATGTaGGCTCCCAGGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: SLGTGLERPAGVAFLCPCLLQMM*APRATT
Trigger: CGTGGTGGCCCTGGGAGCCAACATCATCTGCAACAA...GCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GGGGAGCACCAAGACCCCTGGCCTTGCTCTCTGGGTGGGTCACGGGTGCTGTTCTACAGTGGCACAATCTaGGCTCATTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: GEHQDPWPCSLGGSRVLFYSGTI*AHCNLH
Trigger: GTGGAGGTTGCAATGAGCCAAGATTGTGCCACTGTA...GAACAGCACCCGTGACCCACCCAGAGAGCAAGGCCAGGGGTCTTGGTGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp AGACCCAGCCTGGGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCGATTCCAGCTTTTATaGGGCCGAGCACTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: RPSLGTGLERPAGVAFLCRFQLL*GRALPS
Trigger: GGAGGGGAGTGCTCGGCCCAATAAAAGCTGGAATCG...ACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCCCAGGCTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS TCA 90 bp ATGACAGTGCTCTGTAAAATGGCGGGGCAGACATGGGATGGAGGGTaGTGGAGAGACGATTCCCAGCGCCTGCTTCCACCTCTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: MTVLCKMAGQTWDGG*WRDDSQRLLPPLRL
Trigger: CAGGCGGAGAGGTGGAAGCAGGCGCTGGGAATCGTCTCTCCATCACCCTCCATCCCATGTCTGCCCCGCCATTTTACAGAGCACTGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS CCA 90 bp GAGATCGCGGCTCAACAGGTAAGGACTCGGCTGGGTTCAGGAATGTaGAAATACGACTCGGAGCAGCTACCGCAGAGAGCAGCTAGCGCG +
Preference number: 5 (lower is better)
Translates to: EIAAQQVRTRLGSGM*KYDSEQLPQRAASA
Trigger: CGCGCTAGCTGCTCTCTGCGGTAGCTGCTCCGAGTCGTATTTCCACATTCCTGAACCCAGCCGAGTCCTTACCTGTTGAGCCGCGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CAA 90 bp GGAGCTCCCCGCTTCTGCACCCGTCTATGTCTGCTGCTGGCAGCACCAAGGCAGGCTAGGCCAGGAATCTaGTTGCAGATGATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: GAPRFCTRLCLLLAAPRQARPGI*LQMMLA
Trigger: AGCCAACATCATCTGCAACAAGATTCCTGGCCTAGC...CTGCCTTGGTGCTGCCAGCAGCAGACATAGACGGGTGCAGAAGCGGGGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GGACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACTGGTACTGGCACTCGTaGATGCCCATCTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: GRSVSSSLCSLGYRCVLDWYWHS*MPICAP
Trigger: GGGGGCGCAGATGGGCATCAACGAGTGCCAGTACCA...GTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTGCTGAGCCCAGGCCCTaGGCTTGTCGGCTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRAEPRP*ACRLLK
Trigger: CTTGAGCAGCCGACAAGCCAAGGGCCTGGGCTCAGC...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTAGCCGCCTCCAGGGCTaGCCCAAGTTGCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRSRLQG*PKLPWL
Trigger: CAGCCAAGGCAACTTGGGCAAGCCCTGGAGGCGGCT...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CAA 90 bp CAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTGGCGCGCAGCTGCCATaGGACGGGCCGCCCCTACAT +
Preference number: 5 (lower is better)
Translates to: QSPHHFALWDTGVSWTFIGAQLP*DGPPLH
Trigger: ATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGCC...AATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS-3UTR CAA 90 bp CCATGCCGCCAGGTGGGGCTGGGGACGCTCAGTCTCCTCATCACTTTGCTCTCTGCTAGGCCAGGAATCTaGTTGCAGATGATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: PCRQVGLGTLSLLITLLSARPGI*LQMMLA
Trigger: AGCCAACATCATCTGCAACAAGATTCCTGGCCTAGC...AGAGAGCAAAGTGATGAGGAGACTGAGCGTCCCCAGCCCCACCTGGCGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTGTTGCTCAGGTTCCCTaGGCTGCAGGCAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRVAQVP*AAGSGD
Trigger: GTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAAC...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTGTTGCTGGCAGACTTaGGGGTGGGCAGGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRCCWQT*GWAGAQ
Trigger: CTGAGCCCCTGCCCACCCCAAAGTCTGCCAGCAACA...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCCGCCGCGCGTTCTTCTaGATCTCCCGAGCGTCCACG +
Preference number: 5 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFRRAFF*ISRAST
Trigger: CGTGGACGCTCGGGAGATCAAGAAGAACGCGCGGCG...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GGAACTGGTCTGGAGAGGCCAGCCGGCGTAGCTTTTCTGTGTCCATGCCGCCAGCACCGCGCCCAGCCATaGATAGGATTTTCAAAAGAA +
Preference number: 5 (lower is better)
Translates to: GTGLERPAGVAFLCPCRQHRAQP*IGFSKE
Trigger: TTCTTTTGAAAATCCTATCAATGGCTGGGCGCGGTG...CTGGCGGCATGGACACAGAAAAGCTACGCCGGCTGGCCTCTCCAGACCAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS TCA 90 bp AGGAATCTTGTTGCAGATGATGTTGGCTCCCAGGGCCACCACGGATaGCAGTGCTCTGTAAAATGGCGGGGCAGACATGGGATGGAGGGT +
Preference number: 5 (lower is better)
Translates to: RNLVADDVGSQGHHG*QCSVKWRGRHGMEG
Trigger: ACCCTCCATCCCATGTCTGCCCCGCCATTTTACAGAGCACTGTCATCCGTGGTGGCCCTGGGAGCCAACATCATCTGCAACAAGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS-3UTR CAA 90 bp ACGCTCAGTCTCCTCATCACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTCTTCCAGCCCTCGGCTaGGTTGTAGTAGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: TLSLLITLLSGIQVCPGRLPALG*VVVALL
Trigger: AAGCAGGGCTACTACAACCAAGCCGAGGGCTGGAAG...ACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGTGATGAGGAGACTGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAATGGTACTGGCACTCGTaGATGCCCATCTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: TLLSGIQVCPGRSFSQREWYWHS*MPICAP
Trigger: GGGGGCGCAGATGGGCATCAACGAGTGCCAGTACCA...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS-3UTR CAA 90 bp GACACAGAGTACGGAGTTAGGACTGGCTATGTGTTAGTGCCGAGAATCCTCTTCCACAATCTTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: DTEYGVRTGYVLVPRILFHNLGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAAGATTGTG...GAAGAGGATTCTCGGCACTAACACATAGCCAGTCCTAACTCCGTACTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS-3UTR CAA 90 bp ACTTTGCTCTCTGGGATACAGGTGTGTCCTGGACGTTCATTTTCCCAGAGAGAAAGGCCAGGAATCTTGTaGCAGATGATGTTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: TLLSGIQVCPGRSFSQRERPGIL*QMMLAP
Trigger: GGGAGCCAACATCATCTGCAACAAGATTCCTGGCCT...TTCTCTCTGGGAAAATGAACGTCCAGGACACACCTGTATCCCAGAGAGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS GCA 72 bp GCCGGGTCTCGTGGGCCCGGGCGCAGTTGTCGCCCGTaGCCCGCCGCTAGGGCCGCGCATGGCGCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: AGSRGPGRSCRP*PAARAAHGAGS
Trigger: AGACCCAGCGCCATGCGCGGCCCTAGCGGCGGGGCACGGGCGACAACTGCGCCCGGGCCCACGAGACCCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CCA 72 bp CCTCCCGCGGGTCTGTTCACCGCCTTGCCTGTGGCCTaGACGGGGCTCGCCTCGGGGCAGCCGGCGGCGCAC +
Preference number: 6 (lower is better)
Translates to: PPAGLFTALPVA*TGLASGQPAAH
Trigger: GTGCGCCGCCGGCTGCCCCGAGGCGAGCCCCGTCCAGGCCACAGGCAAGGCGGTGAACAGACCCGCGGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS CCA 72 bp GCCGGGTTCCAGGGTGCCCGCGGCCGCCTCCGGGCCTaGCCTCACTTGCAGGTGAAGACCTCGGTGCGCTCG +
Preference number: 6 (lower is better)
Translates to: AGFQGARGRLRA*PHLQVKTSVRS
Trigger: CGAGCGCACCGAGGTCTTCACCTGCAAGTGAGGCCAGGCCCGGAGGCGGCCGCGGGCACCCTGGAACCCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS CAA 72 bp TTGACCCAGGCTGGGGGCCGCGACCTCGAAGCCCGGTaGAGCGACCGTGGACCCCTGCAAGCGCGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: LTQAGGRDLEAR*SDRGPLQARAG
Trigger: CCCGGCCCGCGCTTGCAGGGGTCCACGGTCGCTCAACCGGGCTTCGAGGTCGCGGCCCCCAGCCTGGGTCAA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339464.9
CDS CCA 72 bp AGACGAGCGCGCTGCGCGGCGACAGTAGAAGCATGGTaGGCCGGCGTGCCTGGCGGGGCTGAACAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: RRARCAATVEAW*AGVPGGAEQAP
Trigger: CGGAGCCTGTTCAGCCCCGCCAGGCACGCCGGCCCACCATGCTTCTACTGTCGCCGCGCAGCGCGCTCGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CCA 72 bp CGGAGACGAGCGCGCTGCGCGGCGACAGTAGAAGCATaGTGGGCCGGCGTGCCTGGCGGGGCTGAACAGGCT +
Preference number: 6 (lower is better)
Translates to: RRRARCAATVEA*WAGVPGGAEQA
Trigger: AGCCTGTTCAGCCCCGCCAGGCACGCCGGCCCACCATGCTTCTACTGTCGCCGCGCAGCGCGCTCGTCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CAA 90 bp GTAGCCCTGCTTCTCGCGGTCGCAGCCGCAGTTGCTCAGGTTCCCTaGGCTGCAGGCAGCGGTGACGGCGTGCGCCACGCCAGCCGCGGT +
Preference number: 6 (lower is better)
Translates to: VALLLAVAAAVAQVP*AAGSGDGVRHASRG
Trigger: ACCGCGGCTGGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACCGCGAGAAGCAGGGCTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
CDS CCA 72 bp CACTTCTCCAAGTCTCCCGAGGCGCGCAGCTGCCATTaGACGGGCCGCCCCTACATCCGCCTCCTCCCCCGG +
Preference number: 6 (lower is better)
Translates to: HFSKSPEARSCH*TGRPYIRLLPR
Trigger: CCGGGGGAGGAGGCGGATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGCCTCGGGAGACTTGGAGAAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CAA 72 bp CTTCTCGCGGTCGCAGCCGCAGTTGCTCAGGTTCCCTaGGCTGCAGGCAGCGGTGACGGCGTGCGCCACGCC +
Preference number: 6 (lower is better)
Translates to: LLAVAAAVAQVP*AAGSGDGVRHA
Trigger: GGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACCGCGAGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
CDS CAA 90 bp CGCTCTGGCTCACTTCTCCAAGTCTCCCGAGGCGCGCAGCTGCCATaGGACGGGCCGCCCCTACATCCGCCTCCTCCCCCGGCGGGTTTT +
Preference number: 6 (lower is better)
Translates to: RSGSLLQVSRGAQLP*DGPPLHPPPPPAGF
Trigger: AAAACCCGCCGGGGGAGGAGGCGGATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGCCTCGGGAGACTTGGAGAAGTGAGCCAGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 72 bp CTCAGGTTCCCTTGGCTGCAGGCAGCGGTGACGGCGTaGGCCACGCCAGCCGCGGTGATGGCGTACGTGAAG +
Preference number: 6 (lower is better)
Translates to: LRFPWLQAAVTA*ATPAAVMAYVK
Trigger: CTTCACGTACGCCATCACCGCGGCTGGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCCAAGGGAACCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
CDS GCA 72 bp TCTCCCGAGCGTCCACGAAGCGCCGGGAGAAGTCGATaGCGTAACGCACGTCGGCCGAGCAGCCGCCCCACT +
Preference number: 6 (lower is better)
Translates to: SPERPRSAGRSR*RNARRPSSRPT
Trigger: AGTGGGGCGGCTGCTCGGCCGACGTGCGTTACGGCATCGACTTCTCCCGGCGCTTCGTGGACGCTCGGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
CDS GCA 72 bp TCCGCCTGGGAAGCCGCGTCTCCCACCAGTGGTACCTaGACCTGCCCCTCCCGCGGGTCTGTTCACCGCCTT +
Preference number: 6 (lower is better)
Translates to: SAWEAASPTSGT*TCPSRGSVHRL
Trigger: AAGGCGGTGAACAGACCCGCGGGAGGGGCAGGTGCAGGTACCACTGGTGGGAGACGCGGCTTCCCAGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS CCA 72 bp TTCTCGCGGTCGCAGCCGCAGTTGCTCAGGTTCCCTTaGCTGCAGGCAGCGGTGACGGCGTGCGCCACGCCA +
Preference number: 6 (lower is better)
Translates to: FSRSQPQLLRFP*LQAAVTACATP
Trigger: TGGCGTGGCGCACGCCGTCACCGCTGCCTGCAGCCAAGGGAACCTGAGCAACTGCGGCTGCGACCGCGAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
CDS CAA 72 bp TCACTTCTCCAAGTCTCCCGAGGCGCGCAGCTGCCATaGGACGGGCCGCCCCTACATCCGCCTCCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: SLLQVSRGAQLP*DGPPLHPPPPP
Trigger: CGGGGGAGGAGGCGGATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGCCTCGGGAGACTTGGAGAAGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 72 bp CTGGCTCACTTCTCCAAGTCTCCCGAGGCGCGCAGCTaGCATTGGACGGGCCGCCCCTACATCCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LAHFSKSPEARS*HWTGRPYIRLL
Trigger: GAGGAGGCGGATGTAGGGGCGGCCCGTCCAATGGCAGCTGCGCGCCTCGGGAGACTTGGAGAAGTGAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 72 bp TGGGAAGCCGCGTCTCCCACCAGTGGTACCTGCACCTaGCCCTCCCGCGGGTCTGTTCACCGCCTTGCCTGT +
Preference number: 6 (lower is better)
Translates to: WEAASPTSGTCT*PSRGSVHRLAC
Trigger: ACAGGCAAGGCGGTGAACAGACCCGCGGGAGGGGCAGGTGCAGGTACCACTGGTGGGAGACGCGGCTTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410089.5
CDS GCA 72 bp CCTTGGCTGCGGTCTGGACCTCCGTCCGTCTGTCGGTaGGAACCGGCTCTGTCGCTCGCTCTGGCTCACTTC +
Preference number: 6 (lower is better)
Translates to: PWLRSGPPSVCR*EPALSLALAHF
Trigger: GAAGTGAGCCAGAGCGAGCGACAGAGCCGGTTCGCACCGACAGACGGACGGAGGTCCAGACCGCAGCCAAGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CCA 72 bp CCCTCCCCAATCACAATGATGGCATCGGGCCGACTCTaGCAGATGGCACGCTGCCGCGGGGCTAGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: PSPITMMASGRL*QMARCRGARPG
Trigger: TCCTGGCCTAGCCCCGCGGCAGCGTGCCATCTGCCAGAGTCGGCCCGATGCCATCATTGTGATTGGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
ENST00000428540.1
CDS CCA 72 bp CCGTCTGTCGGTGCGAACCGGCTCTGTCGCTCGCTCTaGCTCACTTCTCCAAGTCTCCCGAGGCGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: PSVGANRLCRSL*LTSPSLPRRAA
Trigger: AGCTGCGCGCCTCGGGAGACTTGGAGAAGTGAGCCAGAGCGAGCGACAGAGCCGGTTCGCACCGACAGACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS GCA 72 bp GAAAGATCTGCGGGCAATAGACGGAGACGAGCGCGCTaGGCGGCGACAGTAGAAGCATGGTGGGCCGGCGTG +
Preference number: 6 (lower is better)
Translates to: ERSAGNRRRRAR*AATVEAWWAGV
Trigger: CACGCCGGCCCACCATGCTTCTACTGTCGCCGCGCAGCGCGCTCGTCTCCGTCTATTGCCCGCAGATCTTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CAA 72 bp CAGATGGCACGCTGCCGCGGGGCTAGGCCAGGAATCTaGTTGCAGATGATGTTGGCTCCCAGGGCCACCACG +
Preference number: 6 (lower is better)
Translates to: QMARCRGARPGI*LQMMLAPRATT
Trigger: CGTGGTGGCCCTGGGAGCCAACATCATCTGCAACAAGATTCCTGGCCTAGCCCCGCGGCAGCGTGCCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
ENST00000428540.1
CDS CAA 90 bp GCACGCTGCCGCGGGGCTAGGCCAGGAATCTTGTTGCAGATGATGTaGGCTCCCAGGGCCACCACGGATGACAGTGCTCCGAGCTTCACG +
Preference number: 6 (lower is better)
Translates to: ARCRGARPGILLQMM*APRATTDDSAPSFT
Trigger: CGTGAAGCTCGGAGCACTGTCATCCGTGGTGGCCCTGGGAGCCAACATCATCTGCAACAAGATTCCTGGCCTAGCCCCGCGGCAGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339464.9
ENST00000410058.1
CDS CAA 90 bp GCACGCTGCCGCGGGGCTAGGCCAGGAATCTTGTTGCAGATGATGTaGGCTCCCAGGGCCACCACGGATGACAGTGCTCTGTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: ARCRGARPGILLQMM*APRATTDDSALWPG
Trigger: TCCAGGCCACAGAGCACTGTCATCCGTGGTGGCCCTGGGAGCCAACATCATCTGCAACAAGATTCCTGGCCTAGCCCCGCGGCAGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428540.1
CDS TCA 72 bp CTGTCTCCATGGGCTTCTGATAGCTGCGCAGCTGTTTaGTGCGCAGGAAGGTGGGCTGCCGCAGACGGCTGG +
Preference number: 6 (lower is better)
Translates to: LSPWASDSCAAV*CAGRWAAADGW
Trigger: CCAGCCGTCTGCGGCAGCCCACCTTCCTGCGCATCAAACAGCTGCGCAGCTATCAGAAGCCCATGGAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410089.5
CDS CAA 72 bp ATGGCACGCTGCCGCGGGGCTAGGCCAGGAATCTTGTaGCAGATGATGTTGGCTCCCAGGGCCACCACGGAT +
Preference number: 6 (lower is better)
Translates to: MARCRGARPGIL*QMMLAPRATTD
Trigger: ATCCGTGGTGGCCCTGGGAGCCAACATCATCTGCAACAAGATTCCTGGCCTAGCCCCGCGGCAGCGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
ENST00000428540.1
CDS CCA 72 bp GGGCCACCACGGATGACAGTGCTAAGTAGCTGCCGCTaGACAGGAGGAGAAAGATCTGCGGGCAATAGACGG +
Preference number: 6 (lower is better)
Translates to: GPPRMTVLSSCR*TGGERSAGNRR
Trigger: CCGTCTATTGCCCGCAGATCTTTCTCCTCCTGTCCAGCGGCAGCTACTTAGCACTGTCATCCGTGGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409496.7
CDS CAA 72 bp TTGTTATGCAGGTTCATGAGGCGCCGCGCGTTCTTCTaGATCTCCCGAGCGTCCACGAAGCGCCGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: LLCRFMRRRAFF*ISRASTKRREK
Trigger: CTTCTCCCGGCGCTTCGTGGACGCTCGGGAGATCAAGAAGAACGCGCGGCGCCTCATGAACCTGCATAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339464.9
ENST00000409496.7
ENST00000410058.1
ENST00000410089.5
CDS CCA 72 bp GATGTGGTCAAGGAAACAACGGAGAGGAGGTCACCCTaGGTTGTCCAAGTAGGCCCTTCCTGCCGGCCTCAT +
Preference number: 6 (lower is better)
Translates to: DVVKETTERRSP*VVQVGPSCRPH
Trigger: ATGAGGCCGGCAGGAAGGGCCTACTTGGACAACCCAGGGTGACCTCCTCTCCGTTGTTTCCTTGACCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410058.1
CDS CCA 72 bp GCTCAACAGGTAAGGACTCGGCTGGGTTCAGGAATGTaGAAATACGACTCGGAGCAGCTACCGCAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: AQQVRTRLGSGM*KYDSEQLPQRA
Trigger: TGCTCTCTGCGGTAGCTGCTCCGAGTCGTATTTCCACATTCCTGAACCCAGCCGAGTCCTTACCTGTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410089.5