RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT5B (Homo sapiens)

Ensembl gene IDs: ENSG00000111186

Ensembl transcript IDs: ENST00000310594.7, ENST00000397196.7, ENST00000537031.5, ENST00000538854.1, ENST00000539198.5, ENST00000542408.1, ENST00000543071.5, ENST00000543563.1, ENST00000545747.1, ENST00000545811.5

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGGGGGTGGGGGAAGACAGTATAACGTCCACGCAGCCTGGTCATaGACCCTGGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGG +
Preference number: 1 (lower is better)
Translates to: PGGGGRQYNVHAAWS*TLASAAQAQTFSLG
Trigger: CCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCCAGGGTGCATGACCAGGCTGCGTGGACGTTATACTGTCTTCCCCCACCCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 90 bp AAGGCAGGCCTGAAGTCCGGGAGGTGCAGATCTCTCTGTGGTCACTaGGCCAGAGATGACCTTGGACTTCTCATTTTAGGGAAGGAGCCG +
Preference number: 1 (lower is better)
Translates to: KAGLKSGRCRSLCGH*ARDDLGLLILGKEP
Trigger: CGGCTCCTTCCCTAAAATGAGAAGTCCAAGGTCATCTCTGGCCCAGTGACCACAGAGAGATCTGCACCTCCCGGACTTCAGGCCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 90 bp CTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGAAGAATTCTCGCTaGAAAGGCAGGCCTGAAGTCCGGGAGGTGCAGATCTCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: LQVGASEPWRMKNSR*KGRPEVREVQISLW
Trigger: CCACAGAGAGATCTGCACCTCCCGGACTTCAGGCCTGCCTTTCCAGCGAGAATTCTTCATCCTCCACGGTTCACTAGCTCCTACCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTaGAGGATGAAGAATTCTCGCTGGAAAGGCAGGCCTGAAGTCCGG +
Preference number: 1 (lower is better)
Translates to: GQMAPFPLQVGASEP*RMKNSRWKGRPEVR
Trigger: CCGGACTTCAGGCCTGCCTTTCCAGCGAGAATTCTTCATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR TCA 90 bp AGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTaGGAGTCCTCGCCAGAGGGAGAGAAAAAGCCCTGTCTCCCACCC +
Preference number: 1 (lower is better)
Translates to: RPWWTDSKYFQVPTS*ESSPEGEKKPCLPP
Trigger: GGGTGGGAGACAGGGCTTTTTCTCTCCCTCTGGCGAGGACTCTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR TCA 90 bp CTGGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTaGCATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGC +
Preference number: 1 (lower is better)
Translates to: LASAAQAQTFSLGLS*HVRSNGPLSSSGRS
Trigger: GCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 90 bp ACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTaGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGA +
Preference number: 1 (lower is better)
Translates to: TSRLKLSSRHLHRAS*PSGQDHRQSSNQQR
Trigger: TCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR TCA 90 bp GGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCACGTGGATaGAAGAGTAAGAGAGCACCAGGCCTCTTACGGAACCCATCTACA +
Preference number: 1 (lower is better)
Translates to: GAVPVNCRCRTSARG*KSKRAPGLLRNPST
Trigger: TGTAGATGGGTTCCGTAAGAGGCCTGGTGCTCTCTTACTCTTTCATCCACGTGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR TCA 90 bp GAAGTCCGGGAGGTGCAGATCTCTCTGTGGTCACTGGGCCAGAGATaGCCTTGGACTTCTCATTTTAGGGAAGGAGCCGTTCCTGTAAAC +
Preference number: 1 (lower is better)
Translates to: EVREVQISLWSLGQR*PWTSHFREGAVPVN
Trigger: GTTTACAGGAACGGCTCCTTCCCTAAAATGAGAAGTCCAAGGTCATCTCTGGCCCAGTGACCACAGAGAGATCTGCACCTCCCGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR TCA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGCAAGTCCCTACATCCTaGGAGTCCTCGCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWQVPTS*ESSPEG
Trigger: TCCCTCTGGCGAGGACTCTCAGGATGTAGGGACTTG...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR GCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTATGCACCCTGGCTTCTaGAGCCCAGGCGCAAACATT +
Preference number: 2 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRMHPGF*SPGANI
Trigger: AATGTTTGCGCCTGGGCTGCAGAAGCCAGGGTGCAT...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR GCA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTCTGAAGTCCGGGAGGTaGAGATCTCTCTGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGLKSGR*RSLCGH
Trigger: GTGACCACAGAGAGATCTGCACCTCCCGGACTTCAG...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTCCCTCCTCCAGGCCGTaGTGGACAGACAGTAAATAT +
Preference number: 2 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRPSSRP*WTDSKY
Trigger: ATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGG...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR GCA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTCCTGTAAACTGCAGATaGCGCACAAGTGCACGTGGA +
Preference number: 2 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGPVNCR*RTSARG
Trigger: TCCACGTGCACTTGTGCGGCATCTGCAGTTTACAGG...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR TCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTACAAGTGCACGTGGATaGAAGAGTAAGAGAGCACCA +
Preference number: 2 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRTSARG*KSKRAP
Trigger: TGGTGCTCTCTTACTCTTTCATCCACGTGCACTTGT...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTCCTCCAGGCCGTGGTaGACAGACAGTAAATATTTC +
Preference number: 2 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRSSRPW*TDSKYF
Trigger: GAAATATTTACTGTCTGTCCACCACGGCCTGGAGGA...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CCA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTACATGTCAGGTCAAATaGCCCCCTTTCCTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGTCQVK*PPFLFR
Trigger: CCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGT...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CCA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGTCTCTCTGTGGTCACTaGGCCAGAGATGACCTTGGA +
Preference number: 2 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVSLCGH*ARDDLG
Trigger: TCCAAGGTCATCTCTGGCCCAGTGACCACAGAGAGA...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR TCA 90 bp CCTCTTGGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGACTCTCAAGTCCCTACATCCTaGGAGTCCTCGCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: PLGLVARITGSPLTNKDSQVPTS*ESSPEG
Trigger: TCCCTCTGGCGAGGACTCTCAGGATGTAGGGACTTG...AGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGCCCTCCTCCAGGCCGTaGTGGACAGACAGTAAATAT +
Preference number: 2 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMPSSRP*WTDSKY
Trigger: ATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGG...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CAA 90 bp ACGGAACCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTaGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: TEPIYILDKTLKTSR*KLSSRHLHRASWPS
Trigger: ACTAGGCCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGGTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR GCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGCCTGTAAACTGCAGATaGCGCACAAGTGCACGTGGA +
Preference number: 2 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQPVNCR*RTSARG
Trigger: TCCACGTGCACTTGTGCGGCATCTGCAGTTTACAGG...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CCA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCCTTCATAGGGCCTCTTaGCCTAGTGGCCAGGATCAC +
Preference number: 2 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSLHRAS*PSGQDH
Trigger: GTGATCCTGGCCACTAGGCCAAGAGGCCCTATGAAG...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTCCTCCAGGCCGTGGTaGACAGACAGTAAATATTTC +
Preference number: 2 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQSSRPW*TDSKYF
Trigger: GAAATATTTACTGTCTGTCCACCACGGCCTGGAGGA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR TCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTACAAGTGCACGTGGATaGAAGAGTAAGAGAGCACCA +
Preference number: 2 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASTSARG*KSKRAP
Trigger: TGGTGCTCTCTTACTCTTTCATCCACGTGCACTTGT...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR TCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTTCACTGGGCCAGAGATaGCCTTGGACTTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASSLGQR*PWTSHF
Trigger: AAAATGAGAAGTCCAAGGTCATCTCTGGCCCAGTGA...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 72 bp GGGGGTGGGGGAAGACAGTATAACGTCCACGCAGCCTaGTCATGCACCCTGGCTTCTGCAGCCCAGGCGCAA +
Preference number: 3 (lower is better)
Translates to: GGGGRQYNVHAA*SCTLASAAQAQ
Trigger: TTGCGCCTGGGCTGCAGAAGCCAGGGTGCATGACCAGGCTGCGTGGACGTTATACTGTCTTCCCCCACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CAA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGCTGAAGACATCGAGGTaGAAGCTGAGTTCCCGCCAC +
Preference number: 3 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVLKTSR*KLSSRH
Trigger: GTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 72 bp TTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTaGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAAC +
Preference number: 3 (lower is better)
Translates to: LKLSSRHLHRAS*PSGQDHRQSSN
Trigger: GTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 72 bp GGAGCTAGTGAACCGTGGAGGATGAAGAATTCTCGCTaGAAAGGCAGGCCTGAAGTCCGGGAGGTGCAGATC +
Preference number: 3 (lower is better)
Translates to: GASEPWRMKNSR*KGRPEVREVQI
Trigger: GATCTGCACCTCCCGGACTTCAGGCCTGCCTTTCCAGCGAGAATTCTTCATCCTCCACGGTTCACTAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CAA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGATTTTCATCTTTCCATaGTATAGCACCCACCCATTT +
Preference number: 3 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWIFIFP*YSTHPF
Trigger: AAATGGGTGGGTGCTATACAATGGAAAGATGAAAAT...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR TCA 72 bp GTGGAGGATGAAGAATTCTCGCTGGAAAGGCAGGCCTaGAGTCCGGGAGGTGCAGATCTCTCTGTGGTCACT +
Preference number: 3 (lower is better)
Translates to: VEDEEFSLERQA*SPGGADLSVVT
Trigger: AGTGACCACAGAGAGATCTGCACCTCCCGGACTTCAGGCCTGCCTTTCCAGCGAGAATTCTTCATCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 72 bp GCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTaGAGGATGAAGAATTCTCGCTGGAAAGGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: APFPLQVGASEP*RMKNSRWKGRP
Trigger: AGGCCTGCCTTTCCAGCGAGAATTCTTCATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR CCA 72 bp CTGAAGTCCGGGAGGTGCAGATCTCTCTGTGGTCACTaGGCCAGAGATGACCTTGGACTTCTCATTTTAGGG +
Preference number: 3 (lower is better)
Translates to: LKSGRCRSLCGH*ARDDLGLLILG
Trigger: CCCTAAAATGAGAAGTCCAAGGTCATCTCTGGCCCAGTGACCACAGAGAGATCTGCACCTCCCGGACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR TCA 72 bp CCTGTAAACTGCAGATGCCGCACAAGTGCACGTGGATaGAAGAGTAAGAGAGCACCAGGCCTCTTACGGAAC +
Preference number: 3 (lower is better)
Translates to: PVNCRCRTSARG*KSKRAPGLLRN
Trigger: GTTCCGTAAGAGGCCTGGTGCTCTCTTACTCTTTCATCCACGTGCACTTGTGCGGCATCTGCAGTTTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR TCA 72 bp GCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTaGCATGTCAGGTCAAATGGCCCCCTTTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: AAQAQTFSLGLS*HVRSNGPLSSS
Trigger: TGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CAA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCACTGAAGACATCGAGGTaGAAGCTGAGTTCCCGCCAC +
Preference number: 3 (lower is better)
Translates to: SHFREGAVPVNCRCRTSALKTSR*KLSSRH
Trigger: GTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
3UTR-3UTR CAA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTATTTTCATCTTTCCATaGTATAGCACCCACCCATTT +
Preference number: 3 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASIFIFP*YSTHPF
Trigger: AAATGGGTGGGTGCTATACAATGGAAAGATGAAAAT...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTCCGGGCCCGCCAGCCTaGCCCGTTGCAGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRPGPPA*PVAASC
Trigger: ACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGG...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTGCCGGTCCCCGACCTTaGGGAACTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRAGPRP*GTRPAA
Trigger: TGCAGCTGGCCGAGTTCCGCAAGGTCGGGGACCGGC...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGGCCCGGGAAGCTGACTaGACACGGGCTGGGCACCGA +
Preference number: 4 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWAREAD*TRAGHR
Trigger: TCGGTGCCCAGCCCGTGTGCAGTCAGCTTCCCGGGC...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTACAGCAGAGCAGCCGTaGACAGCAGCAGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRTAEQP*TAAAGW
Trigger: CCAGCCTGCTGCTGCTGTTCACGGCTGCTCTGCTGT...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTCGGAACTCGGCCAGCTaGAGCCAGCAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRRNSAS*SQQVLR
Trigger: CCTCAAGACCTGCTGGCTGCAGCTGGCCGAGTTCCG...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGAGCCCGTGCTCTCGTTaGGCAGGCAGTAGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWSPCSR*AGSSRG
Trigger: GCCCCGACTACTGCCTGCGCAACGAGAGCACGGGCT...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGCGTTGTCCGCTGTGCTaGAATTCCACCGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWRCPLC*NSTAAA
Trigger: GGCAGCGGCGGTGGAATTGCAGCACAGCGGACAACG...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTCGCCGCTGCCGGAACTaGTGCTGGCATTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRRRCRN*CWHSLM
Trigger: CATCAAGGAATGCCAGCACCAGTTCCGGCAGCGGCG...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGTTTTGCAGGTTCATaGGCACCCGGCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRCFAGS*APGPAP
Trigger: AGGAGCAGGGCCGGGTGCTCATGAACCTGCAAAACA...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTCAAGTCCCTACATCCTaGGAGTCCTCGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRQVPTS*ESSPEG
Trigger: TCCCTCTGGCGAGGACTCTCAGGATGTAGGGACTTG...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGCGTTGCAGCGTCCTGTaGTTTGTGAGGCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWRCSVL*FVRPPS
Trigger: CGAGGGAGGCCTCACAAACCACAGGACGCTGCAACG...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTCTGAAGTCCGGGAGGTaGAGATCTCTCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRLKSGR*RSLCGH
Trigger: GTGACCACAGAGAGATCTGCACCTCCCGGACTTCAG...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGCCACCTGCACGCTCTTaGACTGGTTGTAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVPPARS*TGCSHA
Trigger: GGCGTGGCTACAACCAGTTCAAGAGCGTGCAGGTGG...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGCTGGAAAGGCAGGCCTaGAGTCCGGGAGGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVLERQA*SPGGAD
Trigger: ATCTGCACCTCCCGGACTTCAGGCCTGCCTTTCCAG...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTATGCACCCTGGCTTCTaGAGCCCAGGCGCAAACATT +
Preference number: 4 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGMHPGF*SPGANI
Trigger: AATGTTTGCGCCTGGGCTGCAGAAGCCAGGGTGCAT...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTGTGAACCGTGGAGGATaGAGAATTCTCGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRVNRGG*RILAGK
Trigger: CTTTCCAGCGAGAATTCTTCATCCTCCACGGTTCAC...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTTCTCCCAAAGACAGATaGGTTGTCCGCTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGSPKDR*VVRCAA
Trigger: TGCAGCACAGCGGACAACGCATCTGTCTTTGGGAGA...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTATGACCACCAGGAGTTaGCGTCTGTCAGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGMTTRS*RLSEAE
Trigger: CTCAGCTTCTGACAGACGCCAACTCCTGGTGGTCAT...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTCTCTCTGTGGTCACTaGGCCAGAGATGACCTTGGA +
Preference number: 4 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWSLCGH*ARDDLG
Trigger: TCCAAGGTCATCTCTGGCCCAGTGACCACAGAGAGA...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGAACGTCCACGCAGCCTaGTCATGCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVNVHAA*SCTLAS
Trigger: AGAAGCCAGGGTGCATGACCAGGCTGCGTGGACGTT...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACCGGGCCCGCCAGCCTaGCCCGTTGCAGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLPGPPA*PVAASC
Trigger: ACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGG...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGCTTCATAGGGCCTCTTaGCCTAGTGGCCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVLHRAS*PSGQDH
Trigger: GTGATCCTGGCCACTAGGCCAAGAGGCCCTATGAAG...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGGAGAGCCCGGGAAGCTaGCTGCACACGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQESPGS*LHTGWA
Trigger: TGCCCAGCCCGTGTGCAGTCAGCTTCCCGGGCTCTC...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGGGCTGCCTATCTGCATaGCTCTCCCAAAGACAGATG +
Preference number: 4 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVGCLSA*LSQRQM
Trigger: CATCTGTCTTTGGGAGAGTCATGCAGATAGGCAGCC...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTAGTTTAGGGCTTTCCTaGCATGTCAGGTCAAATGGC +
Preference number: 4 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGSLGLS*HVRSNG
Trigger: GCCATTTGACCTGACATGTCAGGAAAGCCCTAAACT...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGGCCCGGGAAGCTGACTaGACACGGGCTGGGCACCGA +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQAREAD*TRAGHR
Trigger: TCGGTGCCCAGCCCGTGTGCAGTCAGCTTCCCGGGC...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GAGCACCAGGCCTCTTACGGAACCCATCTACATTCTGGACAAGACCCTGAAGACGCCGGTCCCCGACCTTaGGGAACTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EHQASYGTHLHSGQDPEDAGPRP*GTRPAA
Trigger: TGCAGCTGGCCGAGTTCCGCAAGGTCGGGGACCGGC...GTCTTCAGGGTCTTGTCCAGAATGTAGATGGGTTCCGTAAGAGGCCTGGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGAGCCCGTGCTCTCGTTaGGCAGGCAGTAGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMSPCSR*AGSSRG
Trigger: GCCCCGACTACTGCCTGCGCAACGAGAGCACGGGCT...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGTGCCCAGGGAGCCCGTaGTCTCGTTGCGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWCPGSP*SRCAGS
Trigger: ACTGCCTGCGCAACGAGAGCACGGGCTCCCTGGGCA...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAGCAGCAGGCTGGGCATaGTCGGCCTCAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLAAGWA*SASALP
Trigger: GGGGAGGGCTGAGGCCGACCATGCCCAGCCTGCTGC...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGCGGAACTCGGCCAGCTaGAGCCAGCAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWRNSAS*SQQVLR
Trigger: CCTCAAGACCTGCTGGCTGCAGCTGGCCGAGTTCCG...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGACTCTTGCCCAGGGAGCCCGTaGTCTCGTTGCGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PLGLVARITGSPLTNKDSCPGSP*SRCAGS
Trigger: ACTGCCTGCGCAACGAGAGCACGGGCTCCCTGGGCA...AGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTGGCACAGCTTCCTCTaGCCAGGGGAGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQWHSFL*PGESPG
Trigger: TCCCGGGCTCTCCCCTGGCCAGAGGAAGCTGTGCCA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGACATGTCAGGTCAAATaGCCCCCTTTCCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVTCQVK*PPFLFR
Trigger: CCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGT...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp GAGCACCAGGCCTCTTACGGAACCCATCTACATTCTGGACAAGACCCTGAAGACACAGCAGAGCAGCCGTaGACAGCAGCAGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EHQASYGTHLHSGQDPEDTAEQP*TAAAGW
Trigger: CCAGCCTGCTGCTGCTGTTCACGGCTGCTCTGCTGT...GTCTTCAGGGTCTTGTCCAGAATGTAGATGGGTTCCGTAAGAGGCCTGGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGCCCTCGGTGGAGGAGTaGCAGCAGCAGCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWPSVEE*QQQLKL
Trigger: AAGCTTGAGCTGCTGCTGTCACTCCTCCACCGAGGG...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGGCGTCCTGTGGTTTGTaGGGCCTCCCTCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PPGRGGQTVNISKSLHPEASCGL*GLPRWR
Trigger: CCTCCACCGAGGGAGGCCTCACAAACCACAGGACGC...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GAGCACCAGGCCTCTTACGGAACCCATCTACATTCTGGACAAGACCCTGAAGACCACGCAGCCTGGTCATaGACCCTGGCTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EHQASYGTHLHSGQDPEDHAAWS*TLASAA
Trigger: GGCTGCAGAAGCCAGGGTGCATGACCAGGCTGCGTG...GTCTTCAGGGTCTTGTCCAGAATGTAGATGGGTTCCGTAAGAGGCCTGGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGGACCCCGAGACGCCGTaGCATTTGCAGGCTACGTCT +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMDPETP*HLQATS
Trigger: AGACGTAGCCTGCAAATGCCACGGCGTCTCGGGGTC...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGTGTTTTGCAGGTTCATaGGCACCCGGCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWCFAGS*APGPAP
Trigger: AGGAGCAGGGCCGGGTGCTCATGAACCTGCAAAACA...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCTCTTGGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGACTCTCCACCTGCACGCTCTTaGACTGGTTGTAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: PLGLVARITGSPLTNKDSPPARS*TGCSHA
Trigger: GGCGTGGCTACAACCAGTTCAAGAGCGTGCAGGTGG...AGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATCCCTCGGTGGAGGAGTaGCAGCAGCAGCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LDKTLKTSRLKLSSRHLHPSVEE*QQQLKL
Trigger: AAGCTTGAGCTGCTGCTGTCACTCCTCCACCGAGGG...ATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGCGTCCTGTGGTTTGTaGGGCCTCCCTCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASASCGL*GLPRWR
Trigger: CCTCCACCGAGGGAGGCCTCACAAACCACAGGACGC...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGATGAGCACCCGGCCCTaGTCCTCTGATCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWMSTRP*SSDPLA
Trigger: TGCCAAAGGATCAGAGGAGCAGGGCCGGGTGCTCAT...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGCACGCAGCCTGGTCATaGACCCTGGCTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGRGGQTVNISKSLHPEHAAWS*TLASAA
Trigger: GGCTGCAGAAGCCAGGGTGCATGACCAGGCTGCGTG...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTACAGCAGCAGCAGGCTaGGCATGGTCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASTAAAG*AWSASA
Trigger: GGCTGAGGCCGACCATGCCCAGCCTGCTGCTGCTGT...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCAACAGCAGCAGCAGGCTaGGCATGGTCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SHFREGAVPVNCRCRTSATAAAG*AWSASA
Trigger: GGCTGAGGCCGACCATGCCCAGCCTGCTGCTGCTGT...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGGGTGCTGGCATTCCTTaGTGCCAGTCTTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQGAGIP*CQSWLP
Trigger: AGGGAGCCAAGACTGGCATCAAGGAATGCCAGCACC...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCTCTTGGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGACTCTGGTGCTGGCATTCCTTaGTGCCAGTCTTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLGLVARITGSPLTNKDSGAGIP*CQSWLP
Trigger: AGGGAGCCAAGACTGGCATCAAGGAATGCCAGCACC...AGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGACTCTATGCGTTGTCCGCTGTaGTGCAATTCCACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLGLVARITGSPLTNKDSMRCPL*CNSTAA
Trigger: AGCGGCGGTGGAATTGCAGCACAGCGGACAACGCAT...AGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGAGACGCCGTGGCATTTaGAGGCTACGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMRRRGI*RLRLPS
Trigger: AGATGGCAGACGTAGCCTGCAAATGCCACGGCGTCT...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGATGCACCCTGGCTTCTaGAGCCCAGGCGCAAACATT +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMMHPGF*SPGANI
Trigger: AATGTTTGCGCCTGGGCTGCAGAAGCCAGGGTGCAT...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACGTTGCAGCGTCCTGTaGTTTGTGAGGCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLRCSVL*FVRPPS
Trigger: CGAGGGAGGCCTCACAAACCACAGGACGCTGCAACG...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTCTGGAAAGGCAGGCCTaGAGTCCGGGAGGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASLERQA*SPGGAD
Trigger: ATCTGCACCTCCCGGACTTCAGGCCTGCCTTTCCAG...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAATGCGTTGTCCGCTGTaGTGCAATTCCACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLMRCPL*CNSTAA
Trigger: AGCGGCGGTGGAATTGCAGCACAGCGGACAACGCAT...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGTCTCCCAAAGACAGATaGGTTGTCCGCTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWSPKDR*VVRCAA
Trigger: TGCAGCACAGCGGACAACGCATCTGTCTTTGGGAGA...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAATGAGCACCCGGCCCTaGTCCTCTGATCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLMSTRP*SSDPLA
Trigger: TGCCAAAGGATCAGAGGAGCAGGGCCGGGTGCTCAT...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGAAAGACAGGCCTGGGTaGCTGCTAATGGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMKDRPG*LLMVTV
Trigger: CACAGTGACCATTAGCAGGCACCCAGGCCTGTCTTT...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397196.7
CDS-3UTR CCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGTGCTCCTGGTACAATTaGCACAGCTTCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMCSWYN*HSFLWP
Trigger: TGGCCAGAGGAAGCTGTGCCAATTGTACCAGGAGCA...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCACGCCGCTGCCGGAACTaGTGCTGGCATTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SHFREGAVPVNCRCRTSARRCRN*CWHSLM
Trigger: CATCAAGGAATGCCAGCACCAGTTCCGGCAGCGGCG...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGACCCCGAGACGCCGTaGCATTTGCAGGCTACGTCT +
Preference number: 4 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASDPETP*HLQATS
Trigger: AGACGTAGCCTGCAAATGCCACGGCGTCTCGGGGTC...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGTCTCTCTGTGGTCACTaGGCCAGAGATGACCTTGGA +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMSLCGH*ARDDLG
Trigger: TCCAAGGTCATCTCTGGCCCAGTGACCACAGAGAGA...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGGTGAACCGTGGAGGATaGAGAATTCTCGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWVNRGG*RILAGK
Trigger: CTTTCCAGCGAGAATTCTTCATCCTCCACGGTTCAC...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGTCTTATACACAGCCCTaGGACCGGCCTCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMSYTQP*DRPRCF
Trigger: AAAACAACGAGGCCGGTCGCAGGGCTGTGTATAAGA...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAAGACGCCGTGGCATTTaGAGGCTACGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLRRRGI*RLRLPS
Trigger: AGATGGCAGACGTAGCCTGCAAATGCCACGGCGTCT...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGGCCGTTCCTGTAAACTaGAGATGCCGCACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQAVPVN*RCRTSA
Trigger: TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGC...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTGCTCCTGGTACAATTaGCACAGCTTCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQCSWYN*HSFLWP
Trigger: TGGCCAGAGGAAGCTGTGCCAATTGTACCAGGAGCA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCAAACGTCCACGCAGCCTaGTCATGCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SHFREGAVPVNCRCRTSANVHAA*SCTLAS
Trigger: AGAAGCCAGGGTGCATGACCAGGCTGCGTGGACGTT...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGGAGAAACCGTACACCTaGGGCAGAGATGATGAGCAC +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQEKPYT*GRDDEH
Trigger: GTGCTCATCATCTCTGCCCCAGGTGTACGGTTTCTC...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGCAAACTAGGCTACATTaGGGGCCACCGTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PPGRGGQTVNISKSLHPEQTRLH*GPPFPS
Trigger: GCTCGGAAACGGTGGCCCCCAATGTAGCCTAGTTTG...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397196.7
CDS-3UTR TCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGGTCTTCTCGCTCTCTTaGGATCTTACTGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMVFSLS*DLTEAV
Trigger: GACAGCTTCAGTAAGATCTCAAGAGAGCGAGAAGAC...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310594.7
CDS-3UTR TCA 90 bp CTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCTTGGACAAGTGCACGTGGATaGAAGAGTAAGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: LKTSRLKLSSRHLHRASWTSARG*KSKRAP
Trigger: TGGTGCTCTCTTACTCTTTCATCCACGTGCACTTGT...CCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGACTCTTCTCGGCTGCCTATCTaGATGACTCTCCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: PLGLVARITGSPLTNKDSSRLPI*MTLPKT
Trigger: TGTCTTTGGGAGAGTCATGCAGATAGGCAGCCGAGA...AGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTCTTATACACAGCCCTaGGACCGGCCTCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQSYTQP*DRPRCF
Trigger: AAAACAACGAGGCCGGTCGCAGGGCTGTGTATAAGA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGCCTGTAAACTGCAGATaGCGCACAAGTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: PPGRGGQTVNISKSLHPEPVNCR*RTSARG
Trigger: TCCACGTGCACTTGTGCGGCATCTGCAGTTTACAGG...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCACTGAAGTCCGGGAGGTaGAGATCTCTCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SHFREGAVPVNCRCRTSALKSGR*RSLCGH
Trigger: GTGACCACAGAGAGATCTGCACCTCCCGGACTTCAG...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGGCTCCTCTGATCCTTTaGCAAAGTTCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMAPLIL*QSSSLA
Trigger: AGCGAGAGAAGAACTTTGCCAAAGGATCAGAGGAGC...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACCCTCCTCCAGGCCGTaGTGGACAGACAGTAAATAT +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLPSSRP*WTDSKY
Trigger: ATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGG...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCACTTCATAGGGCCTCTTaGCCTAGTGGCCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: SHFREGAVPVNCRCRTSALHRAS*PSGQDH
Trigger: GTGATCCTGGCCACTAGGCCAAGAGGCCCTATGAAG...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAGAGAAACCGTACACCTaGGGCAGAGATGATGAGCAC +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLEKPYT*GRDDEH
Trigger: GTGCTCATCATCTCTGCCCCAGGTGTACGGTTTCTC...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCAAGCCAAAGACAGGCCTaGGTGCCTGCTAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: SHFREGAVPVNCRCRTSASQRQA*VPANGH
Trigger: GTGACCATTAGCAGGCACCCAGGCCTGTCTTTGGCT...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397196.7
CDS-3UTR TCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGGCTGCCTATCTGCATaGCTCTCCCAAAGACAGATG +
Preference number: 4 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASGCLSA*LSQRQM
Trigger: CATCTGTCTTTGGGAGAGTCATGCAGATAGGCAGCC...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTTTGCAGGCTACGTCTaGCATCTTATACACAGCCCT +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQFAGYV*HLIHSP
Trigger: AGGGCTGTGTATAAGATGGCAGACGTAGCCTGCAAA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTCCTGTAAACTGCAGATaGCGCACAAGTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASPVNCR*RTSARG
Trigger: TCCACGTGCACTTGTGCGGCATCTGCAGTTTACAGG...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCGCCGTTCCTGTAAACTaGAGATGCCGCACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSAVPVN*RCRTSA
Trigger: TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGC...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GAGCACCAGGCCTCTTACGGAACCCATCTACATTCTGGACAAGACCCTGAAGACATGAAGAATTCTCGCTaGAAAGGCAGGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: EHQASYGTHLHSGQDPEDMKNSR*KGRPEV
Trigger: GACTTCAGGCCTGCCTTTCCAGCGAGAATTCTTCAT...GTCTTCAGGGTCTTGTCCAGAATGTAGATGGGTTCCGTAAGAGGCCTGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGATGAAGAATTCTCGCTaGAAAGGCAGGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQMKNSR*KGRPEV
Trigger: GACTTCAGGCCTGCCTTTCCAGCGAGAATTCTTCAT...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAGGAGCTAGTGAACCGTaGAGGATGAAGAATTCTCGC +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLGASEP*RMKNSR
Trigger: GCGAGAATTCTTCATCCTCCACGGTTCACTAGCTCC...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGGGAGCTAGTGAACCGTaGAGGATGAAGAATTCTCGC +
Preference number: 4 (lower is better)
Translates to: PPGRGGQTVNISKSLHPEGASEP*RMKNSR
Trigger: GCGAGAATTCTTCATCCTCCACGGTTCACTAGCTCC...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCTCCATCAGGCTCCAGTaGAATCTCTCTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSSIRLQ*NLSGPA
Trigger: TGCAGGACCAGAGAGATTCCACTGGAGCCTGATGGA...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397196.7
3UTR CAA 72 bp ATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTaGAAGCTGAGTTCCCGCCACCTTCATAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IYILDKTLKTSR*KLSSRHLHRAS
Trigger: AGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp CCTCTTGGCCTAGTGGCCAGGATCACAGGCAGTCCTCTAACCAACAAAGACTCTCTCTTGAGATCTTACTaGAGCTGTCAACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLGLVARITGSPLTNKDSLLRSY*SCQPSA
Trigger: AGCAGAAGGTTGACAGCTTCAGTAAGATCTCAAGAG...AGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACTAGGCCAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310594.7
CDS-3UTR TCA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGACAAGTGCACGTGGATaGAAGAGTAAGAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: PPGRGGQTVNISKSLHPETSARG*KSKRAP
Trigger: TGGTGCTCTCTTACTCTTTCATCCACGTGCACTTGT...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR TCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAAGTTTAGGGCTTTCCTaGCATGTCAGGTCAAATGGC +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLSLGLS*HVRSNG
Trigger: GCCATTTGACCTGACATGTCAGGAAAGCCCTAAACT...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCTCTCGGCTGCCTATCTaGATGACTCTCCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSSRLPI*MTLPKT
Trigger: TGTCTTTGGGAGAGTCATGCAGATAGGCAGCCGAGA...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTATTTGCAGGCTACGTCTaGCATCTTATACACAGCCCT +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLFAGYV*HLIHSP
Trigger: AGGGCTGTGTATAAGATGGCAGACGTAGCCTGCAAA...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAGCTCCTCTGATCCTTTaGCAAAGTTCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLAPLIL*QSSSLA
Trigger: AGCGAGAGAAGAACTTTGCCAAAGGATCAGAGGAGC...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTATTTACAGATGTACTaGTCCACGATCTCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQYLQMY*STISVH
Trigger: GTGCACGGAGATCGTGGACCAGTACATCTGTAAATA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTACATGTCAGGTCAAATaGCCCCCTTTCCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASTCQVK*PPFLFR
Trigger: CCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGT...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCAACATCTCGGGTCTCTaGACCGGGTTCAAAGCTAAT +
Preference number: 4 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSNISGL*TGFKAN
Trigger: ATTAGCTTTGAACCCGGTGCAGAGACCCGAGATGTT...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR GCA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCAAACATCTCGGGTCTCTaGACCGGGTTCAAAGCTAAT +
Preference number: 4 (lower is better)
Translates to: SHFREGAVPVNCRCRTSANISGL*TGFKAN
Trigger: ATTAGCTTTGAACCCGGTGCAGAGACCCGAGATGTT...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTATATTTACAGATGTACTaGTCCACGATCTCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLYLQMY*STISVH
Trigger: GTGCACGGAGATCGTGGACCAGTACATCTGTAAATA...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CCA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCTCCTCCAGGCCGTGGTaGACAGACAGTAAATATTTC +
Preference number: 4 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSSSRPW*TDSKYF
Trigger: GAAATATTTACTGTCTGTCCACCACGGCCTGGAGGA...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp CCGTACACCTGGGGCAGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGGGTGAAGCGGCTGTaGACCAGCTCCAGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: PYTWGRDDEHAGPASLTRWVKRL*TSSSRP
Trigger: GGGCCGGCTGGAGCTGGTCAACAGCCGCTTCACCCA...ACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGAGCTCCAGCCGGCCCTaGCGGGTGACGCGCATGGCG +
Preference number: 5 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVSSSRP*RVTRMA
Trigger: CGCCATGCGCGTCACCCGCAAGGGCCGGCTGGAGCT...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS TCA 90 bp TGGCGTCTGTCAGAAGCTGAGCCCAGCTGGACAGCAGAGCAGCCGTaGACAGCAGCAGCAGGCTGGGCATGGTCGGCCTCAGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: WRLSEAEPSWTAEQP*TAAAGWAWSASALP
Trigger: GGGGAGGGCTGAGGCCGACCATGCCCAGCCTGCTGCTGCTGTTCACGGCTGCTCTGCTGTCCAGCTGGGCTCAGCTTCTGACAGACGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310594.7
ENST00000397196.7
ENST00000537031.5
ENST00000539198.5
ENST00000542408.1
ENST00000543071.5
ENST00000543563.1
ENST00000545811.5
CDS-3UTR CAA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTCGCCAGCCTGACCCGTaGCAGCGTCCTGTGGTTTGT +
Preference number: 5 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGRQPDP*QRPVVC
Trigger: ACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCG...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp AGAGATGATGAGCACGCCGGGCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGGAGACGCCGTGGCATTaGCAGGCTACGTCTGCCATC +
Preference number: 5 (lower is better)
Translates to: RDDEHAGPASLTRCSVLWETPWH*QATSAI
Trigger: GATGGCAGACGTAGCCTGCAAATGCCACGGCGTCTC...CCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGGCGTGCTCATCATCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp GCCCGCCAGCCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGTGCTCCTGGTACAATaGGCACAGCTTCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: ARQPDPLQRPVVCEASLGVLLVQ*AQLPLA
Trigger: GGCCAGAGGAAGCTGTGCCAATTGTACCAGGAGCAC...ACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGGCCCGGCTGATGGCGTaGACCACGCCCGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMARLMA*TTPAAL
Trigger: GAGCGCCGCGGGCGTGGTCAACGCCATCAGCCGGGC...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS TCA 90 bp CGAGCAGCCCCCAGACGCCCCCTTGGGAGAGCTGGAGTAACACAGTaGAGCAACGTGCAAGGGAACTGCAAGCAGCTGGGCCTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: RAAPRRPLGRAGVTQ*SNVQGNCKQLGLPA
Trigger: TGCAGGCAGGCCCAGCTGCTTGCAGTTCCCTTGCACGTTGCTTCACTGTGTTACTCCAGCTCTCCCAAGGGGGCGTCTGGGGGCTGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545747.1
CDS GCA 90 bp CCAGGGGCTGTGACAAGAGTAAGTCCCCAGAGTAAGGCGGGATTCTaGTGGCATGGCCCGCTCCCACAGCCTCCTGCCCACATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PGAVTRVSPQSKAGF*WHGPLPQPPAHIQL
Trigger: CAGCTGGATGTGGGCAGGAGGCTGTGGGAGCGGGCCATGCCAGCAGAATCCCGCCTTACTCTGGGGACTTACTCTTGTCACAGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537031.5
CDS-3UTR CAA 90 bp CCTGACCCGTTGCAGCGTCCTGTGGTTTGTGAGGCCTCCCTCGGTGGAGGAGTGGAGACGCCGTGGCATTaGCAGGCTACGTCTGCCATC +
Preference number: 5 (lower is better)
Translates to: PDPLQRPVVCEASLGGGVETPWH*QATSAI
Trigger: GATGGCAGACGTAGCCTGCAAATGCCACGGCGTCTC...CACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS CCA 90 bp GGGGCTGTGACAAGAGTAAGTCCCCAGAGTAAGGCGGGATTCTGCTaGCATGGCCCGCTCCCACAGCCTCCTGCCCACATCCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GAVTRVSPQSKAGFC*HGPLPQPPAHIQLF
Trigger: GAACAGCTGGATGTGGGCAGGAGGCTGTGGGAGCGGGCCATGCCAGCAGAATCCCGCCTTACTCTGGGGACTTACTCTTGTCACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537031.5
CDS-3UTR CAA 90 bp GGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTGAACCGTGGAGGATGAGCCGGTCCCCGACCTaGCGGAACTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GQMAPFPLQVGASEPWRMSRSPT*RNSASC
Trigger: GCAGCTGGCCGAGTTCCGCAAGGTCGGGGACCGGCT...CATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS GCA 90 bp AGGAGCCGGGGTGAGGCGGAGAAAGTTGCACTGATGCTTACGTGCTaGGTGTTCCCCACAAAGAAGCTCGGCCTCTTTCCAGCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: RSRGEAEKVALMLTC*VFPTKKLGLFPASA
Trigger: GGCGGAGGCTGGAAAGAGGCCGAGCTTCTTTGTGGGGAACACGCAGCACGTAAGCATCAGTGCAACTTTCTCCGCCTCACCCCGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS GCA 90 bp ACCAGGAGCCGGGGTGAGGCGGAGAAAGTTGCACTGATGCTTACGTaGTGCGTGTTCCCCACAAAGAAGCTCGGCCTCTTTCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRSRGEAEKVALMLT*CVFPTKKLGLFPAS
Trigger: GGAGGCTGGAAAGAGGCCGAGCTTCTTTGTGGGGAACACGCAGCACGTAAGCATCAGTGCAACTTTCTCCGCCTCACCCCGGCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS CCA 90 bp TCTCGGGTCTCTGCACCGGGTTCAAAGCTAATGACCACCAGGAGTTaGCGTCTGTCAGAAGCTGAGCCCAGCTGGACAGCAGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SRVSAPGSKLMTTRS*RLSEAEPSWTAEQP
Trigger: CGGCTGCTCTGCTGTCCAGCTGGGCTCAGCTTCTGACAGACGCCAACTCCTGGTGGTCATTAGCTTTGAACCCGGTGCAGAGACCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310594.7
ENST00000397196.7
ENST00000537031.5
ENST00000539198.5
ENST00000542408.1
ENST00000543071.5
ENST00000543563.1
ENST00000545811.5
CDS-3UTR CAA 90 bp TCTCATTTTAGGGAAGGAGCCGTTCCTGTAAACTGCAGATGCCGCACAAGTGCAAGCTCCAGCCGGCCCTaGCGGGTGACGCGCATGGCG +
Preference number: 5 (lower is better)
Translates to: SHFREGAVPVNCRCRTSASSSRP*RVTRMA
Trigger: CGCCATGCGCGTCACCCGCAAGGGCCGGCTGGAGCT...TGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTGGGTGAAGCGGCTGTaGACCAGCTCCAGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQWVKRL*TSSSRP
Trigger: GGGCCGGCTGGAGCTGGTCAACAGCCGCTTCACCCA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS TCA 90 bp GGGTTCAAAGCTAATGACCACCAGGAGTTGGCGTCTGTCAGAAGCTaGGCCCAGCTGGACAGCAGAGCAGCCGTGAACAGCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GFKANDHQELASVRS*AQLDSRAAVNSSSR
Trigger: CCTGCTGCTGCTGTTCACGGCTGCTCTGCTGTCCAGCTGGGCTCAGCTTCTGACAGACGCCAACTCCTGGTGGTCATTAGCTTTGAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310594.7
ENST00000397196.7
ENST00000537031.5
ENST00000539198.5
ENST00000542408.1
ENST00000543071.5
ENST00000543563.1
ENST00000545811.5
CDS TCA 90 bp GATAAGGGCAGACCAGGAGCCGGGGTGAGGCGGAGAAAGTTGCACTaGTGCTTACGTGCTGCGTGTTCCCCACAAAGAAGCTCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: DKGRPGAGVRRRKLH*CLRAACSPQRSSAS
Trigger: AGAGGCCGAGCTTCTTTGTGGGGAACACGCAGCACGTAAGCATCAGTGCAACTTTCTCCGCCTCACCCCGGCTCCTGGTCTGCCCTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS TCA 90 bp GTCAGTGTGGAAACTCAGCGGATAAGGGCAGACCAGGAGCCGGGGTaGGGCGGAGAAAGTTGCACTGATGCTTACGTGCTGCGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: VSVETQRIRADQEPG*GGESCTDAYVLRVP
Trigger: GGGAACACGCAGCACGTAAGCATCAGTGCAACTTTCTCCGCCTCACCCCGGCTCCTGGTCTGCCCTTATCCGCTGAGTTTCCACACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS-3UTR CAA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGTGCAGCCAGCAGGTCTaGAGGCTGCAGGACCCCGAG +
Preference number: 5 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQCSQQV*RLQDPE
Trigger: CTCGGGGTCCTGCAGCCTCAAGACCTGCTGGCTGCA...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCAGCCGGTCCCCGACCTaGCGGAACTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSSRSPT*RNSASC
Trigger: GCAGCTGGCCGAGTTCCGCAAGGTCGGGGACCGGCT...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp GGCTTCTGCAGCCCAGGCGCAAACATTCAGTTTAGGGCTTTCCTGACATGTCAGCGCCAGCCTGACCCGTaGCAGCGTCCTGTGGTTTGT +
Preference number: 5 (lower is better)
Translates to: GFCSPGANIQFRAFLTCQRQPDP*QRPVVC
Trigger: ACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCG...CTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS GCA 90 bp GGCAGCCGGGAGGCCACTTCGGCTGTTGTAAAGCATACCTGTCCTTaGTGCAGAACATCCAAAGAAATGGGGCCCATCCTATCCACTCCC +
Preference number: 5 (lower is better)
Translates to: GSREATSAVVKHTCP*CRTSKEMGPILSTP
Trigger: GGGAGTGGATAGGATGGGCCCCATTTCTTTGGATGTTCTGCAGCAAGGACAGGTATGCTTTACAACAGCCGAAGTGGCCTCCCGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS GCA 90 bp TTCCCCACAAAGAAGCTCGGCCTCTTTCCAGCCTCCGCCTCCCACTaGTCATCTTCCCACCCTAGGACTTCTGTCTCTTACCCCAAACTG +
Preference number: 5 (lower is better)
Translates to: FPTKKLGLFPASASH*SSSHPRTSVSYPKL
Trigger: CAGTTTGGGGTAAGAGACAGAAGTCCTAGGGTGGGAAGATGAGCAGTGGGAGGCGGAGGCTGGAAAGAGGCCGAGCTTCTTTGTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS CCA 90 bp GAGATGAATGTTGCAATGAATGGAACAGCGGAAGGACAGCACCCCTaGGTCCACAGCACCTTCAACGGCGAGCCCCAGAGCCTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: EMNVAMNGTAEGQHP*VHSTFNGEPQSLSS
Trigger: TGAAGACAGGCTCTGGGGCTCGCCGTTGAAGGTGCTGTGGACCCAGGGGTGCTGTCCTTCCGCTGTTCCATTCATTGCAACATTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538854.1
CDS-3UTR CAA 90 bp TTTCCTGACATGTCAGGTCAAATGGCCCCCTTTCCTCTTCAGGTAGGAGCTAGTTGCAGCCAGCAGGTCTaGAGGCTGCAGGACCCCGAG +
Preference number: 5 (lower is better)
Translates to: FPDMSGQMAPFPLQVGASCSQQV*RLQDPE
Trigger: CTCGGGGTCCTGCAGCCTCAAGACCTGCTGGCTGCA...ACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACATGTCAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS GCA 90 bp AGCCGGGAGGCCACTTCGGCTGTTGTAAAGCATACCTGTCCTTGCTaGAGAACATCCAAAGAAATGGGGCCCATCCTATCCACTCCCCCA +
Preference number: 5 (lower is better)
Translates to: SREATSAVVKHTCPC*RTSKEMGPILSTPP
Trigger: TGGGGGAGTGGATAGGATGGGCCCCATTTCTTTGGATGTTCTGCAGCAAGGACAGGTATGCTTTACAACAGCCGAAGTGGCCTCCCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS GCA 90 bp CAGAACATCCAAAGAAATGGGGCCCATCCTATCCACTCCCCCACGTaGCTACCTCTCATTCCAGCCCAGAGACTTATTTCTCTGACCCTC +
Preference number: 5 (lower is better)
Translates to: QNIQRNGAHPIHSPT*LPLIPAQRLISLTL
Trigger: GAGGGTCAGAGAAATAAGTCTCTGGGCTGGAATGAGAGGTAGGCACGTGGGGGAGTGGATAGGATGGGCCCCATTTCTTTGGATGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS CCA 90 bp CCTCCCCAGTGCCCTGGGACTGACAGTTTCCAGAGTAGGGTTCCCTaGAGAAAACAGAAATGGAGAGTCAGTGTGGAAACTCAGCGGATA +
Preference number: 5 (lower is better)
Translates to: PPQCPGTDSFQSRVP*RKQKWRVSVETQRI
Trigger: TATCCGCTGAGTTTCCACACTGACTCTCCATTTCTGTTTTCTCCAGGGAACCCTACTCTGGAAACTGTCAGTCCCAGGGCACTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS-3UTR CAA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCGTGCTCCTGGTACAATaGGCACAGCTTCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSVLLVQ*AQLPLA
Trigger: GGCCAGAGGAAGCTGTGCCAATTGTACCAGGAGCAC...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp CTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCCGCCACCTTCATCCAAAGACAGATGCGTaGTCCGCTGTGCTGCAATTC +
Preference number: 5 (lower is better)
Translates to: LDKTLKTSRLKLSSRHLHPKTDA*SAVLQF
Trigger: GAATTGCAGCACAGCGGACAACGCATCTGTCTTTGG...ATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACCAAAGACAGATGCGTaGTCCGCTGTGCTGCAATTC +
Preference number: 5 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLPKTDA*SAVLQF
Trigger: GAATTGCAGCACAGCGGACAACGCATCTGTCTTTGG...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp CCCATCTACATTCTGGACAAGACCCTGAAGACATCGAGGTTGAAGCTGAGTTCCCTGAAGACATCGAGGTaGAAGCTGAGTTCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: PIYILDKTLKTSRLKLSSLKTSR*KLSSRH
Trigger: GTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAG...GGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTGTCCAGAATGTAGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTATGCTCCTCTGATCCTTaGGCAAAGTTCTTCTCTCGC +
Preference number: 5 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLCSSDP*AKFFSR
Trigger: GCGAGAGAAGAACTTTGCCAAAGGATCAGAGGAGCA...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGTGCTCCTCTGATCCTTaGGCAAAGTTCTTCTCTCGC +
Preference number: 5 (lower is better)
Translates to: PPGRGGQTVNISKSLHPECSSDP*AKFFSR
Trigger: GCGAGAGAAGAACTTTGCCAAAGGATCAGAGGAGCA...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS CCA 90 bp TTGCTTCATTTTTGTAAACAGGCAGGAGATGAATGTTGCAATGAATaGAACAGCGGAAGGACAGCACCCCTGGGTCCACAGCACCTTCAA +
Preference number: 5 (lower is better)
Translates to: LLHFCKQAGDECCNE*NSGRTAPLGPQHLQ
Trigger: TTGAAGGTGCTGTGGACCCAGGGGTGCTGTCCTTCCGCTGTTCCATTCATTGCAACATTCATCTCCTGCCTGTTTACAAAAATGAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538854.1
CDS CCA 90 bp TGCTCATCTTCCCACCCTAGGACTTCTGTCTCTTACCCCAAACTGTaGGAACCCTGCACAGGACCTAATTTCCAAAGAAATAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: CSSSHPRTSVSYPKL*EPCTGPNFQRNNEL
Trigger: CAGCTCATTATTTCTTTGGAAATTAGGTCCTGTGCAGGGTTCCCACAGTTTGGGGTAAGAGACAGAAGTCCTAGGGTGGGAAGATGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS-3UTR CAA 90 bp CCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTACATCCTGAGATTTTCATCTTTCCATaGTATAGCACCCACCCATTT +
Preference number: 5 (lower is better)
Translates to: PPGRGGQTVNISKSLHPEIFIFP*YSTHPF
Trigger: AAATGGGTGGGTGCTATACAATGGAAAGATGAAAAT...CTCAGGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS-3UTR CAA 90 bp AACCTCCCTCCTCCAGGCCGTGGTGGACAGACAGTAAATATTTCCAAGTCCCTAATTTTCATCTTTCCATaGTATAGCACCCACCCATTT +
Preference number: 5 (lower is better)
Translates to: NLPPPGRGGQTVNISKSLIFIFP*YSTHPF
Trigger: AAATGGGTGGGTGCTATACAATGGAAAGATGAAAAT...TAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000397196.7
CDS TCA 90 bp GTAGGGTTCCCTGATTCCAGTCTTCTCGCTCTCTTGAGATCTTACTaGAGCTGTCAACCTTCTGCTTCAAAAATTAGCAGTTTCCATTTG +
Preference number: 5 (lower is better)
Translates to: VGFPDSSLLALLRSY*SCQPSASKISSFHL
Trigger: CAAATGGAAACTGCTAATTTTTGAAGCAGAAGGTTGACAGCTTCAGTAAGATCTCAAGAGAGCGAGAAGACTGGAATCAGGGAACCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310594.7
ENST00000538854.1
CDS CAA 72 bp GGCGGGTGCTTCGGGTCATCAGCCCGGGAAGTATTTTaGTCCTGGGGCCGCCAGGAGAGGACAGTGGCCCGA +
Preference number: 6 (lower is better)
Translates to: GGCFGSSAREVF*SWGRQERTVAR
Trigger: TCGGGCCACTGTCCTCTCCTGGCGGCCCCAGGACAAAAATACTTCCCGGGCTGATGACCCGAAGCACCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543563.1
CDS CCA 72 bp TGCTTCGGGTCATCAGCCCGGGAAGTATTTTTGTCCTaGGGCCGCCAGGAGAGGACAGTGGCCCGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: CFGSSAREVFLS*GRQERTVARAG
Trigger: CCCTGCTCGGGCCACTGTCCTCTCCTGGCGGCCCCAGGACAAAAATACTTCCCGGGCTGATGACCCGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543563.1
CDS GCA 72 bp GGACCCCGAGACGCCGTGGCATTTGCAGGCTACGTCTaGCATCTTATACACAGCCCTGCGACCGGCCTCGTT +
Preference number: 6 (lower is better)
Translates to: GPRDAVAFAGYV*HLIHSPATGLV
Trigger: AACGAGGCCGGTCGCAGGGCTGTGTATAAGATGGCAGACGTAGCCTGCAAATGCCACGGCGTCTCGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310594.7
ENST00000397196.7
ENST00000537031.5
ENST00000543071.5
CDS TCA 72 bp CCCAGACGCCCCCTTGGGAGAGCTGGAGTAACACAGTaGAGCAACGTGCAAGGGAACTGCAAGCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PRRPLGRAGVTQ*SNVQGNCKQLG
Trigger: GCCCAGCTGCTTGCAGTTCCCTTGCACGTTGCTTCACTGTGTTACTCCAGCTCTCCCAAGGGGGCGTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545747.1
CDS CCA 72 bp GTTGCAATGAATGGAACAGCGGAAGGACAGCACCCCTaGGTCCACAGCACCTTCAACGGCGAGCCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: VAMNGTAEGQHP*VHSTFNGEPQS
Trigger: GCTCTGGGGCTCGCCGTTGAAGGTGCTGTGGACCCAGGGGTGCTGTCCTTCCGCTGTTCCATTCATTGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538854.1
CDS TCA 72 bp GCTAATGACCACCAGGAGTTGGCGTCTGTCAGAAGCTaGGCCCAGCTGGACAGCAGAGCAGCCGTGAACAGC +
Preference number: 6 (lower is better)
Translates to: ANDHQELASVRS*AQLDSRAAVNS
Trigger: GCTGTTCACGGCTGCTCTGCTGTCCAGCTGGGCTCAGCTTCTGACAGACGCCAACTCCTGGTGGTCATTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310594.7
ENST00000397196.7
ENST00000537031.5
ENST00000539198.5
ENST00000542408.1
ENST00000543071.5
ENST00000543563.1
ENST00000545811.5
CDS TCA 72 bp AGACCAGGAGCCGGGGTGAGGCGGAGAAAGTTGCACTaGTGCTTACGTGCTGCGTGTTCCCCACAAAGAAGC +
Preference number: 6 (lower is better)
Translates to: RPGAGVRRRKLH*CLRAACSPQRS
Trigger: GCTTCTTTGTGGGGAACACGCAGCACGTAAGCATCAGTGCAACTTTCTCCGCCTCACCCCGGCTCCTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS CCA 72 bp CAGCAGGTCTTGAGGCTGCAGGACCCCGAGACGCCGTaGCATTTGCAGGCTACGTCTGCCATCTTATACACA +
Preference number: 6 (lower is better)
Translates to: QQVLRLQDPETP*HLQATSAILYT
Trigger: TGTGTATAAGATGGCAGACGTAGCCTGCAAATGCCACGGCGTCTCGGGGTCCTGCAGCCTCAAGACCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310594.7
ENST00000397196.7
ENST00000537031.5
ENST00000542408.1
ENST00000543071.5
ENST00000545747.1
CDS CAA 90 bp CGGCAGCCGGGAGGCCACTTCGGCTGTTGTAAAGCATACCTGTCCTaGCTGCAGAACATCCAAAGAAATGGGGCCCATCCTATCCACTCC +
Preference number: 6 (lower is better)
Translates to: RQPGGHFGCCKAYLS*LQNIQRNGAHPIHS
Trigger: GGAGTGGATAGGATGGGCCCCATTTCTTTGGATGTTCTGCAGCAAGGACAGGTATGCTTTACAACAGCCGAAGTGGCCTCCCGGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS TCA 72 bp GAGTCATCAGGAGTCTTGCCATACACCATCCATTTGTaGGCAAGACCACCGTCTTCCTCCCGAGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: ESSGVLPYTIHL*ARPPSSSRAAP
Trigger: GGGGGCTGCTCGGGAGGAAGACGGTGGTCTTGCTCACAAATGGATGGTGTATGGCAAGACTCCTGATGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545747.1
CDS GCA 72 bp CGGGGTGAGGCGGAGAAAGTTGCACTGATGCTTACGTaGTGCGTGTTCCCCACAAAGAAGCTCGGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: RGEAEKVALMLT*CVFPTKKLGLF
Trigger: AAAGAGGCCGAGCTTCTTTGTGGGGAACACGCAGCACGTAAGCATCAGTGCAACTTTCTCCGCCTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS CCA 72 bp TCTGCACCGGGTTCAAAGCTAATGACCACCAGGAGTTaGCGTCTGTCAGAAGCTGAGCCCAGCTGGACAGCA +
Preference number: 6 (lower is better)
Translates to: SAPGSKLMTTRS*RLSEAEPSWTA
Trigger: TGCTGTCCAGCTGGGCTCAGCTTCTGACAGACGCCAACTCCTGGTGGTCATTAGCTTTGAACCCGGTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310594.7
ENST00000397196.7
ENST00000537031.5
ENST00000539198.5
ENST00000542408.1
ENST00000543071.5
ENST00000543563.1
ENST00000545811.5
CDS GCA 72 bp GGTGAGGCGGAGAAAGTTGCACTGATGCTTACGTGCTaGGTGTTCCCCACAAAGAAGCTCGGCCTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: GEAEKVALMLTC*VFPTKKLGLFP
Trigger: TGGAAAGAGGCCGAGCTTCTTTGTGGGGAACACGCAGCACGTAAGCATCAGTGCAACTTTCTCCGCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS GCA 72 bp GGACCCCGAGACGCCGTGGCATTTGCAGGCTACGTCTaGCATCTTATACACAGCCATGTAGTCACTAACTCC +
Preference number: 6 (lower is better)
Translates to: GPRDAVAFAGYV*HLIHSHVVTNS
Trigger: GGAGTTAGTGACTACATGGCTGTGTATAAGATGGCAGACGTAGCCTGCAAATGCCACGGCGTCTCGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545747.1
CDS GCA 72 bp CGGAGAGGCTGCAAGCGAATTCTCCTCGTCACTCACTaGTCATGCAGAAACGACACCTGGGTTTTTATCTGG +
Preference number: 6 (lower is better)
Translates to: RRGCKRILLVTH*SCRNDTWVFIW
Trigger: CCAGATAAAAACCCAGGTGTCGTTTCTGCATGAGCAGTGAGTGACGAGGAGAATTCGCTTGCAGCCTCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538854.1
CDS GCA 72 bp CAAAGAAATGGGGCCCATCCTATCCACTCCCCCACGTaGCTACCTCTCATTCCAGCCCAGAGACTTATTTCT +
Preference number: 6 (lower is better)
Translates to: QRNGAHPIHSPT*LPLIPAQRLIS
Trigger: AGAAATAAGTCTCTGGGCTGGAATGAGAGGTAGGCACGTGGGGGAGTGGATAGGATGGGCCCCATTTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS CAA 72 bp GGAGGCCACTTCGGCTGTTGTAAAGCATACCTGTCCTaGCTGCAGAACATCCAAAGAAATGGGGCCCATCCT +
Preference number: 6 (lower is better)
Translates to: GGHFGCCKAYLS*LQNIQRNGAHP
Trigger: AGGATGGGCCCCATTTCTTTGGATGTTCTGCAGCAAGGACAGGTATGCTTTACAACAGCCGAAGTGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS GCA 72 bp GCCACTTCGGCTGTTGTAAAGCATACCTGTCCTTGCTaGAGAACATCCAAAGAAATGGGGCCCATCCTATCC +
Preference number: 6 (lower is better)
Translates to: ATSAVVKHTCPC*RTSKEMGPILS
Trigger: GGATAGGATGGGCCCCATTTCTTTGGATGTTCTGCAGCAAGGACAGGTATGCTTTACAACAGCCGAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS GCA 72 bp GAGGCCACTTCGGCTGTTGTAAAGCATACCTGTCCTTaGTGCAGAACATCCAAAGAAATGGGGCCCATCCTA +
Preference number: 6 (lower is better)
Translates to: EATSAVVKHTCP*CRTSKEMGPIL
Trigger: TAGGATGGGCCCCATTTCTTTGGATGTTCTGCAGCAAGGACAGGTATGCTTTACAACAGCCGAAGTGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543071.5
CDS CCA 72 bp TTTTGTAAACAGGCAGGAGATGAATGTTGCAATGAATaGAACAGCGGAAGGACAGCACCCCTGGGTCCACAG +
Preference number: 6 (lower is better)
Translates to: FCKQAGDECCNE*NSGRTAPLGPQ
Trigger: CTGTGGACCCAGGGGTGCTGTCCTTCCGCTGTTCCATTCATTGCAACATTCATCTCCTGCCTGTTTACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538854.1
CDS CCA 72 bp CAAGTCTACCCCAGAAGTCACAGAACCGCCACAACGTaGAGTAGATTTGAACTTGAGTTATCCCAAATCAAA +
Preference number: 6 (lower is better)
Translates to: QVYPRSHRTATT*SRFELELSQIK
Trigger: TTTGATTTGGGATAACTCAAGTTCAAATCTACTCCACGTTGTGGCGGTTCTGTGACTTCTGGGGTAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545747.1