RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT5A (Homo sapiens)

Ensembl gene IDs: ENSG00000114251

Ensembl transcript IDs: ENST00000264634.9, ENST00000474267.5, ENST00000482079.1, ENST00000493406.1, ENST00000497027.5, ENST00000497817.1, ENST00000624674.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAAACGTaGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: VLQPKGTQWSCRLET*PASHHNTEESERAQ
Trigger: CTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 90 bp CATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTaGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGA +
Preference number: 1 (lower is better)
Translates to: HFLSYNQRGPSGAAV*KRGQHHITTRRNQR
Trigger: TCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR GCA 90 bp GTGAGTCAGAACTCAAGCTTCCTCAGAAACAAGGTTGCTTCGTCGTaGTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGAC +
Preference number: 1 (lower is better)
Translates to: VSQNSSFLRNKVASS*SRYDHSRATAQAQD
Trigger: GTCTTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGGAAGCTTGAGTTCTGACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 90 bp GCTCCTAATGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTaGAGCTGCCGTTTGGAAACGTGGCCAGCATCACATCACAACACG +
Preference number: 1 (lower is better)
Translates to: APNVSFPVLQPKGTQ*SCRLETWPASHHNT
Trigger: CGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACATTAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR GCA 90 bp AATGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTaGCGTTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAA +
Preference number: 1 (lower is better)
Translates to: NVSFPVLQPKGTQWS*RLETWPASHHNTEE
Trigger: TTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 90 bp AGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCTaGTGCAGTGCTGAATGGCACGCAATTACCTTGTTGCTTGGGCTG +
Preference number: 1 (lower is better)
Translates to: RKVDFTVFPQIGCLL*CSAEWHAITLLLGL
Trigger: CAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR GCA 90 bp AAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCTGGTaGAGTGCTGAATGGCACGCAATTACCTTGTTGCTTGGGCTGAGA +
Preference number: 1 (lower is better)
Translates to: KVDFTVFPQIGCLLW*SAEWHAITLLLGLR
Trigger: TCTCAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 90 bp CTACCTTTTCTATCTCTCTATATATTGTGGGCCACTAAGTGTTTGTaGACTGATGCTGCTAACGATCTCTTGGAGTTAGCTAGTACCGGT +
Preference number: 1 (lower is better)
Translates to: LPFLSLYILWATKCL*TDAANDLLELASTG
Trigger: ACCGGTACTAGCTAACTCCAAGAGATCGTTAGCAGCATCAGTCCACAAACACTTAGTGGCCCACAATATATAGAGAGATAGAAAAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR TCA 90 bp AAGAACACTGGTCAATATACAACTGAGGAAAAACTGAAACAGATGTaGGTCCTAGAACCACAAGAGTTTGAATTTGCCCAGAAATGCTAT +
Preference number: 1 (lower is better)
Translates to: KNTGQYTTEEKLKQM*VLEPQEFEFAQKCY
Trigger: ATAGCATTTCTGGGCAAATTCAAACTCTTGTGGTTCTAGGACTCACATCTGTTTCAGTTTTTCCTCAGTTGTATATTGACCAGTGTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR TCA 90 bp TCGGGTATATGTTTTTGCAATAAAGAACACTGGTCAATATACAACTaGGGAAAAACTGAAACAGATGTGAGTCCTAGAACCACAAGAGTT +
Preference number: 1 (lower is better)
Translates to: SGICFCNKEHWSIYN*GKTETDVSPRTTRV
Trigger: AACTCTTGTGGTTCTAGGACTCACATCTGTTTCAGTTTTTCCTCAGTTGTATATTGACCAGTGTTCTTTATTGCAAAAACATATACCCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGGGACCCAGTGGAGCTaGCGTTTGGAAACGTGGCCA +
Preference number: 2 (lower is better)
Translates to: VASSCSRYDHSRATAQAQGTQWS*RLETWP
Trigger: TGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGGTTGTCTGCTCTGGTaGAGTGCTGAATGGCACGCA +
Preference number: 2 (lower is better)
Translates to: VASSCSRYDHSRATAQAQGCLLW*SAEWHA
Trigger: TGCGTGCCATTCAGCACTGCACCAGAGCAGACAACC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CAA 90 bp TCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTaGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAG +
Preference number: 2 (lower is better)
Translates to: SFPVLQPKGTQWSCR*ETWPASHHNTEESE
Trigger: CTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGACTTTCCTCCCTGCTaGCCAAATTTCATGAGCTAT +
Preference number: 2 (lower is better)
Translates to: VASSCSRYDHSRATAQAQDFPPC*PNFMSY
Trigger: ATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAACCACCCTCTTTCAACTaGAACCTACCCATCCCATAT +
Preference number: 2 (lower is better)
Translates to: TWPASHHNTEESERAQCEPPSFN*NLPIPY
Trigger: ATATGGGATGGGTAGGTTCCAGTTGAAAGAGGGTGG...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAATAGGTTGTCTGCTCTaGTGCAGTGCTGAATGGCAC +
Preference number: 2 (lower is better)
Translates to: FGNVASITSQHGGIREGSIGCLL*CSAEWH
Trigger: GTGCCATTCAGCACTGCACCAGAGCAGACAACCTAT...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAATGGGCTGAGAACCTGTaGATGGGATTCATGTATTAT +
Preference number: 2 (lower is better)
Translates to: TWPASHHNTEESERAQCEWAENL*MGFMYY
Trigger: ATAATACATGAATCCCATTCACAGGTTCTCAGCCCA...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAATAGAAGCTGAATTGTaGATAGATTTCTACCACCCT +
Preference number: 2 (lower is better)
Translates to: VASSCSRYDHSRATAQAQIEAEL*IDFYHP
Trigger: AGGGTGGTAGAAATCTATTCACAATTCAGCTTCTAT...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACGGGACCCAGTGGAGCTaGCGTTTGGAAACGTGGCCA +
Preference number: 2 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYGTQWS*RLETWP
Trigger: TGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCC...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CAA 90 bp GGTTGTCTGCTCTGGTGCAGTGCTGAATGGCACGCAATTACCTTGTaGCTTGGGCTGAGAACCTGTGAATGGGATTCATGTATTATTTTT +
Preference number: 2 (lower is better)
Translates to: GCLLWCSAEWHAITL*LGLRTCEWDSCIIF
Trigger: AAAAATAATACATGAATCCCATTCACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGCAGACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CAA 90 bp ATAGGTTGTCTGCTCTGGTGCAGTGCTGAATGGCACGCAATTACCTaGTTGCTTGGGCTGAGAACCTGTGAATGGGATTCATGTATTATT +
Preference number: 2 (lower is better)
Translates to: IGCLLWCSAEWHAIT*LLGLRTCEWDSCII
Trigger: AATAATACATGAATCCCATTCACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGCAGACAACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGATATTTCTTTACCTTCTaGATGTGTACCATGTCCACA +
Preference number: 2 (lower is better)
Translates to: CFISCPTTKGDPVELPFGYFFTF*MCTMST
Trigger: TGTGGACATGGTACACATCCAGAAGGTAAAGAAATA...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCACAAGACCTTTTATCTTaGACCAGAGAATTTACAACT +
Preference number: 2 (lower is better)
Translates to: FGNVASITSQHGGIREGSQDLLS*TREFTT
Trigger: AGTTGTAAATTCTCTGGTGCAAGATAAAAGGTCTTG...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CCA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCCCACCCTCTTTCAACTaGAACCTACCCATCCCATAT +
Preference number: 2 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLPPSFN*NLPIPY
Trigger: ATATGGGATGGGTAGGTTCCAGTTGAAAGAGGGTGG...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACGCTCTGGTGCAGTGCTaGATGGCACGCAATTACCTT +
Preference number: 2 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYALVQC*MARNYL
Trigger: AAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGC...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGCTCTGGTGCAGTGCTaGATGGCACGCAATTACCTT +
Preference number: 2 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSALVQC*MARNYL
Trigger: AAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACAGAGCCACAGTTGGCTaGGGTGATATGAAAGCCAAC +
Preference number: 2 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYRATVG*GDMKAN
Trigger: GTTGGCTTTCATATCACCTCAGCCAACTGTGGCTCT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGGGGACTTTCCTCCCTaGTGCCCAAATTTCATGAGC +
Preference number: 2 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEGDFPP*CPNFMS
Trigger: GCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCCCC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGTATTTCTTTACCTTCTaGATGTGTACCATGTCCACA +
Preference number: 2 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLYFFTF*MCTMST
Trigger: TGTGGACATGGTACACATCCAGAAGGTAAAGAAATA...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCAACACGCATTTCAGTaGGTCAGAACTCAAGCTTCC +
Preference number: 2 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYQHAFQ*VRTQAS
Trigger: GGAAGCTTGAGTTCTGACTCACTGAAATGCGTGTTG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAACCTCAGAAACAAGGTTaGTTCGTCGTGCTCAAGGTA +
Preference number: 2 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEPQKQG*FVVLKV
Trigger: TACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGG...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATGGTGCAGTGCTGAATaGCACGCAATTACCTTGTTG +
Preference number: 2 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSWCSAE*HAITLL
Trigger: CAACAAGGTAATTGCGTGCCATTCAGCACTGCACCA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGACTTTCCTCCCTGCTaGCCAAATTTCATGAGCTAT +
Preference number: 2 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSDFPPC*PNFMSY
Trigger: ATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACATAACAGTGATACGCTaGAACACCTCTGTGAATTCC +
Preference number: 2 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYITVIR*NTSVNS
Trigger: GGAATTCACAGAGGTGTTGCAGCGTATCACTGTTAT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAATAACAGTGATACGCTaGAACACCTCTGTGAATTCC +
Preference number: 2 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEITVIR*NTSVNS
Trigger: GGAATTCACAGAGGTGTTGCAGCGTATCACTGTTAT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACATAGAAGCTGAATTGTaGATAGATTTCTACCACCCT +
Preference number: 2 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYIEAEL*IDFYHP
Trigger: AGGGTGGTAGAAATCTATTCACAATTCAGCTTCTAT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR TCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAATTGCACTTAACACAATaGACCTTTAGTTTCCAACCA +
Preference number: 2 (lower is better)
Translates to: NAFLASLKGFNMLQGYPELHLTQ*TFSFQP
Trigger: TGGTTGGAAACTAAAGGTTCATTGTGTTAAGTGCAA...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR GCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCAAGACCTTTTATCTTaGACCAGAGAATTTACAACT +
Preference number: 2 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYQDLLS*TREFTT
Trigger: AGTTGTAAATTCTCTGGTGCAAGATAAAAGGTCTTG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACAGTGGAGCTGCCGTTaGGAAACGTGGCCAGCATCA +
Preference number: 3 (lower is better)
Translates to: VASSCSRYDHSRATAQAQQWSCR*ETWPAS
Trigger: TGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 72 bp CCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAAACGTaGCCAGCATCACATCACAACACGGAGGAATCAGAG +
Preference number: 3 (lower is better)
Translates to: PKGTQWSCRLET*PASHHNTEESE
Trigger: CTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 72 bp TCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTaGAAACGTGGCCAGCATCACATCACAACACGGAGG +
Preference number: 3 (lower is better)
Translates to: SYNQRGPSGAAV*KRGQHHITTRR
Trigger: CCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR TCA 72 bp CCTCAGAAACAAGGTTGCTTCGTCGTGCTCAAGGTATaGTCACAGCAGGGCCACAGCCCAAGCTCAAGACTC +
Preference number: 3 (lower is better)
Translates to: PQKQGCFVVLKV*SQQGHSPSSRL
Trigger: GAGTCTTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR GCA 72 bp TTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTaGCGTTTGGAAACGTGGCCAGCATCACATCACAAC +
Preference number: 3 (lower is better)
Translates to: FPVLQPKGTQWS*RLETWPASHHN
Trigger: GTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 72 bp GTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTaGAGCTGCCGTTTGGAAACGTGGCCAGCATCACAT +
Preference number: 3 (lower is better)
Translates to: VSFPVLQPKGTQ*SCRLETWPASH
Trigger: ATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAACACGCAATTACCTTGTaGCTTGGGCTGAGAACCTGT +
Preference number: 3 (lower is better)
Translates to: TWPASHHNTEESERAQCEHAITL*LGLRTC
Trigger: ACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTG...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR GCA 72 bp AACTCAAGCTTCCTCAGAAACAAGGTTGCTTCGTCGTaGTCAAGGTATGATCACAGCAGGGCCACAGCCCAA +
Preference number: 3 (lower is better)
Translates to: NSSFLRNKVASS*SRYDHSRATAQ
Trigger: TTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGGAAGCTTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 72 bp CCTCAAATAGGTTGTCTGCTCTGGTGCAGTGCTGAATaGCACGCAATTACCTTGTTGCTTGGGCTGAGAACC +
Preference number: 3 (lower is better)
Translates to: PQIGCLLWCSAE*HAITLLLGLRT
Trigger: GGTTCTCAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGCAGACAACCTATTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 72 bp GATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCTaGTGCAGTGCTGAATGGCACGCAATTACCTTGTTG +
Preference number: 3 (lower is better)
Translates to: DFTVFPQIGCLL*CSAEWHAITLL
Trigger: CAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGCAGACAACCTATTTGAGGAAAAACAGTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCTGCAAATGGAATATTaGAGGAGAATGAGACATGTG +
Preference number: 3 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLLQMEY*RRMRHV
Trigger: CACATGTCTCATTCTCCTCAAATATTCCATTTGCAG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CCA 72 bp CTATCTCTCTATATATTGTGGGCCACTAAGTGTTTGTaGACTGATGCTGCTAACGATCTCTTGGAGTTAGCT +
Preference number: 3 (lower is better)
Translates to: LSLYILWATKCL*TDAANDLLELA
Trigger: AGCTAACTCCAAGAGATCGTTAGCAGCATCAGTCCACAAACACTTAGTGGCCCACAATATATAGAGAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR TCA 72 bp GTGCTGAATGGCACGCAATTACCTTGTTGCTTGGGCTaGGAACCTGTGAATGGGATTCATGTATTATTTTTA +
Preference number: 3 (lower is better)
Translates to: VLNGTQLPCCLG*EPVNGIHVLFL
Trigger: TAAAAATAATACATGAATCCCATTCACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCCCAAGACCTTTTATCTaGCACCAGAGAATTTACAAC +
Preference number: 3 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLPRPFI*HQRIYN
Trigger: GTTGTAAATTCTCTGGTGCAAGATAAAAGGTCTTGG...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACACGCAATTACCTTGTaGCTTGGGCTGAGAACCTGT +
Preference number: 3 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSHAITL*LGLRTC
Trigger: ACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTG...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACTTTTCCTCAAATAGGTaGTCTGCTCTGGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYFSSNR*SALVQC
Trigger: GCACTGCACCAGAGCAGACAACCTATTTGAGGAAAA...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCAGTGTCCAGAATCATTaGGGGATCTTTTTACAATCT +
Preference number: 3 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLSVQNH*GIFLQS
Trigger: AGATTGTAAAAAGATCCCCAAATGATTCTGGACACT...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATTTTCCTCAAATAGGTaGTCTGCTCTGGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSFSSNR*SALVQC
Trigger: GCACTGCACCAGAGCAGACAACCTATTTGAGGAAAA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTCCAAGACCTTTTATCTaGCACCAGAGAATTTACAAC +
Preference number: 3 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAPRPFI*HQRIYN
Trigger: GTTGTAAATTCTCTGGTGCAAGATAAAAGGTCTTGG...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCTGCAAATGGAATATTaGAGGAGAATGAGACATGTG +
Preference number: 3 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYLQMEY*RRMRHV
Trigger: CACATGTCTCATTCTCCTCAAATATTCCATTTGCAG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACAAGCTTCCAAATAGCTaGGTTTTGGTAAAATTCACC +
Preference number: 3 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYKLPNS*VLVKFT
Trigger: GGTGAATTTTACCAAAACCAAGCTATTTGGAAGCTT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGAGATAAGAACATATTaGATGGCACTGTTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEEIRTY*MALFGK
Trigger: CTTTCCAAACAGTGCCATCAAATATGTTCTTATCTC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAACCAAATAGCTTGGTTTaGGTAAAATTCACCACTCTT +
Preference number: 3 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEPNSLV*VKFTTL
Trigger: AAGAGTGGTGAATTTTACCAAAACCAAGCTATTTGG...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGCAGTGAACCGGAGCTaGAGCGGGCACTGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQAVNRS*SGHWRP
Trigger: CGGGCGCCAGTGCCCGCTTCAGCTCCGGTTCACTGC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGTCCGGCGGGCGCAGTaGACCGGAGCTGAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGVRRAQ*TGAEAG
Trigger: GCCCGCTTCAGCTCCGGTTCACTGCGCCCGCCGGAC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAAGCCCTTGGCGTGGATaGGCTCCCGCTCGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQSPWRG*APARGR
Trigger: ACGCCCGCGAGCGGGAGCGCATCCACGCCAAGGGCT...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAACTTGCCCCGGCTGTTaGGCCGCATGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSTCPGC*AAWPPR
Trigger: GCGCGGCGGCCATGCGGCTCAACAGCCGGGGCAAGT...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGGTCAGGAGCAGGGCTaGGGAGTCCTCCGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSGQEQG*GVLRRA
Trigger: CGCGCGCCGGAGGACTCCGCAGCCCTGCTCCTGACC...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAGGATGCGCCCAGGAATaGAGGGGGCGCGGACGCGCG +
Preference number: 4 (lower is better)
Translates to: CFISCPTTKGDPVELPFGGCAQE*RGRGRA
Trigger: CGCGCGTCCGCGCCCCCTCCATTCCTGGGCGCATCC...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTACTTGCCCCGGCTGTTaGGCCGCATGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSATCPGC*AAWPPR
Trigger: GCGCGGCGGCCATGCGGCTCAACAGCCGGGGCAAGT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGGGAGCGGGGCTGAGTaGTGGGTGGCACCCACTACT +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQGSGAE*WVAPTT
Trigger: AGTAGTGGGTGCCACCCAGCACTCAGCCCCGCTCCC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACCTGGACTCCCGAGTTaGGGCAGAGCTGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQPGLPS*GRAGMR
Trigger: GCGCATCCCAGCTCTGCCCCAACTCGGGAGTCCAGG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACCGTCTGCACGGTCTTaGACTGGTCGTAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQPSARS*TGRSHG
Trigger: GCCGTGGCTACGACCAGTTCAAGACCGTGCAGACGG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTAGCCCTTGGCGTGGATaGGCTCCCGCTCGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSASPWRG*APARGR
Trigger: ACGCCCGCGAGCGGGAGCGCATCCACGCCAAGGGCT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGGGAGCGGGGCTGAGTaGTGGGTGGCACCCACTACT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGGSGAE*WVAPTT
Trigger: AGTAGTGGGTGCCACCCAGCACTCAGCCCCGCTCCC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAACCTGGACTCCCGAGTTaGGGCAGAGCTGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEPGLPS*GRAGMR
Trigger: GCGCATCCCAGCTCTGCCCCAACTCGGGAGTCCAGG...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGGTCCGGCGGGCGCAGTaGACCGGAGCTGAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLVRRAQ*TGAEAG
Trigger: GCCCGCTTCAGCTCCGGTTCACTGCGCCCGCCGGAC...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGCCGTCTGCACGGTCTTaGACTGGTCGTAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGPSARS*TGRSHG
Trigger: GCCGTGGCTACGACCAGTTCAAGACCGTGCAGACGG...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGGGTCAGGAGCAGGGCTaGGGAGTCCTCCGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLGQEQG*GVLRRA
Trigger: CGCGCGCCGGAGGACTCCGCAGCCCTGCTCCTGACC...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGAGGCCGTCTCGCGGCTaGCTATCTGCATCACCCTGC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGRPSRG*LSASPC
Trigger: GCAGGGTGATGCAGATAGGCAGCCGCGAGACGGCCT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAGGCGTTCACCACCCCTaGTGCGCTCACCGCGTATGT +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEGVHHP*CAHRVC
Trigger: ACATACGCGGTGAGCGCAGCAGGGGTGGTGAACGCC...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGGCGTTCACCACCCCTaGTGCGCTCACCGCGTATGT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGGVHHP*CAHRVC
Trigger: ACATACGCGGTGAGCGCAGCAGGGGTGGTGAACGCC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGGGCATCACCCACCTTaGGGAAGTCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQGHHPP*GSLPAA
Trigger: TGCAGCTGGCAGACTTCCGCAAGGTGGGTGATGCCC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAATGCCCAGCGAGCCGGTaGTCTCATTGCGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCECPASR*SHCARS
Trigger: ACTGCGTGCGCAATGAGAGCACCGGCTCGCTGGGCA...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTGCCCAGCGAGCCGGTaGTCTCATTGCGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGCPASR*SHCARS
Trigger: ACTGCGTGCGCAATGAGAGCACCGGCTCGCTGGGCA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGCACGCCCGGCTCATaGCGTTCACCACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAGTPGS*RSPPLL
Trigger: CAGCAGGGGTGGTGAACGCCATGAGCCGGGCGTGCC...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTCTCGTAGGAGCCCTTaGCGTGGATGCGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGSRRSP*RGCAPA
Trigger: AGCGGGAGCGCATCCACGCCAAGGGCTCCTACGAGA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAAGGCCGTCTCGCGGCTaGCTATCTGCATCACCCTGC +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSRPSRG*LSASPC
Trigger: GCAGGGTGATGCAGATAGGCAGCCGCGAGACGGCCT...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGGGCATCACCCACCTTaGGGAAGTCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGGHHPP*GSLPAA
Trigger: TGCAGCTGGCAGACTTCCGCAAGGTGGGTGATGCCC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGAGCCGGACACCCCATaGCACTTGCAGGCCACATCA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGEPDTP*HLQATS
Trigger: TGATGTGGCCTGCAAGTGCCATGGGGTGTCCGGCTC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
3UTR CAA 72 bp GTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTaGGAAACGTGGCCAGCATCACATCACAACACGGAG +
Preference number: 4 (lower is better)
Translates to: VLQPKGTQWSCR*ETWPASHHNTE
Trigger: CTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTGTCTTCAGGCTACATaGGCCGGACACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGCLQAT*AGHPMA
Trigger: TGCCATGGGGTGTCCGGCTCATGTAGCCTGAAGACA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGTCGTGCTCAAGGTATaGTCACAGCAGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGVVLKV*SQQGHS
Trigger: GCTGTGGCCCTGCTGTGATCATACCTTGAGCACGAC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAGTCGTGCTCAAGGTATaGTCACAGCAGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEVVLKV*SQQGHS
Trigger: GCTGTGGCCCTGCTGTGATCATACCTTGAGCACGAC...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTAGGCCGTCTCGCGGCTaGCTATCTGCATCACCCTGC +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSARPSRG*LSASPC
Trigger: GCAGGGTGATGCAGATAGGCAGCCGCGAGACGGCCT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGACACCCCATGGCACTTaGAGGCCACATCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGTPHGT*RPHQPG
Trigger: ACCTGGCTGATGTGGCCTGCAAGTGCCATGGGGTGT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTGCCCAGCGAGCCGGTaGTCTCATTGCGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSACPASR*SHCARS
Trigger: ACTGCGTGCGCAATGAGAGCACCGGCTCGCTGGGCA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGAAATCGCCCCCAGGCTaGGTCCCTCCGCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLKSPPG*VPPPFP
Trigger: GGGGAAGGGCGGAGGGACGCAGCCTGGGGGCGATTT...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474267.5
CDS-3UTR CCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGGGCACGCCCGGCTCATaGCGTTCACCACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLGTPGS*RSPPLL
Trigger: CAGCAGGGGTGGTGAACGCCATGAGCCGGGCGTGCC...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTCTCGTAGGAGCCCTTaGCGTGGATGCGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSASRRSP*RGCAPA
Trigger: AGCGGGAGCGCATCCACGCCAAGGGCTCCTACGAGA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTTCACCACCCCTGCTaGGCTCACCGCGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSVHHPC*AHRVCE
Trigger: TTCACATACGCGGTGAGCGCAGCAGGGGTGGTGAAC...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGCATCACCCACCTTaGGGAAGTCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAGHHPP*GSLPAA
Trigger: TGCAGCTGGCAGACTTCCGCAAGGTGGGTGATGCCC...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGCTCTGGTGCAGTGCTaGATGGCACGCAATTACCTT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGALVQC*MARNYL
Trigger: AAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATTGGCTGAGGTGATATaGAAGCCAACCTGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQLAEVI*KPTCLR
Trigger: CCTTAGGCAGGTTGGCTTTCATATCACCTCAGCCAA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGTTCACCACCCCTGCTaGGCTCACCGCGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAVHHPC*AHRVCE
Trigger: TTCACATACGCGGTGAGCGCAGCAGGGGTGGTGAAC...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTACACCCCATGGCACTTaGAGGCCACATCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSATPHGT*RPHQPG
Trigger: ACCTGGCTGATGTGGCCTGCAAGTGCCATGGGGTGT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGTGGCACCCACTACTTaGACACAAACTGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGVAPTT*TQTGPR
Trigger: TCGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCAC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCAATGGACTTCTTCATaGCGAGGGGGAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLQWTSS*RGGGGA
Trigger: CGCGCCCCCTCCCCCTCGCCATGAAGAAGTCCATTG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCGGCACGCCCGGCTCATaGCGTTCACCACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLGTPGS*RSPPLL
Trigger: CAGCAGGGGTGGTGAACGCCATGAGCCGGGCGTGCC...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTCGCAGTAGTCAGGGCTaGGGTCGATGTAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSARSSQG*GRCRPG
Trigger: ACCTGGTCTACATCGACCCCAGCCCTGACTACTGCG...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATACTTGCACACAAACTaGTCCACGATCTCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQYLHTN*STISVH
Trigger: GTGCACGGAGATCGTGGACCAGTTTGTGTGCAAGTA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATGCCGTTTGGAAACGTaGCCAGCATCACATCACAAC +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQCRLET*PASHHN
Trigger: GTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTGCAGTGAACCGGAGCTaGAGCGGGCACTGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAAVNRS*SGHWRP
Trigger: CGGGCGCCAGTGCCCGCTTCAGCTCCGGTTCACTGC...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAAGTTTCTTCTGTCCTTaGGAAAGTCCTGCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQSFFCP*ESPASW
Trigger: CCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACT...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGATACTGGCATTCTTTaGTGCCTGTCTTCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGDTGIL*CLSSRL
Trigger: AAGGCGCGAAGACAGGCATCAAAGAATGCCAGTATC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGCCTTGTTGCTTGGGCTaGGAACCTGTGAATGGGATT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGPCCLG*EPVNGI
Trigger: AATCCCATTCACAGGTTCTCAGCCCAAGCAACAAGG...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATGTTATCCACAGTGCTaGAGTTCCACCTTCGATGTC +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQCYPQC*SSTFDV
Trigger: GACATCGAAGGTGGAACTGCAGCACTGTGGATAACA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAGTGGCACCCACTACTTaGACACAAACTGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: CFISCPTTKGDPVELPFGVAPTT*TQTGPR
Trigger: TCGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCAC...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAGGGGACTTTCCTCCCTaGTGCCCAAATTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: CFISCPTTKGDPVELPFGGDFPP*CPNFMS
Trigger: GCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCCCC...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGAAAGTCCTGCCAGTTaGCTGCAGAGAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAESPAS*LQRGCA
Trigger: AGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTC...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAATACTTGCACACAAACTaGTCCACGATCTCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEYLHTN*STISVH
Trigger: GTGCACGGAGATCGTGGACCAGTTTGTGTGCAAGTA...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTAGTGGAGCTGCCGTTTaGAAACGTGGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSASGAAV*KRGQHH
Trigger: GTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGAGTTTCTTCTGTCCTTaGGAAAGTCCTGCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGSFFCP*ESPASW
Trigger: CCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR TCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAATACTGCATGTGGTCCTaGTACAAGTGGCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEYCMWS*YKWHSF
Trigger: GAAACTGTGCCACTTGTATCAGGACCACATGCAGTA...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTACTGCATGTGGTCCTaGTACAAGTGGCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGYCMWS*YKWHSF
Trigger: GAAACTGTGCCACTTGTATCAGGACCACATGCAGTA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGTGTCTTCAGGCTACATaGGCCGGACACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLCLQAT*AGHPMA
Trigger: TGCCATGGGGTGTCCGGCTCATGTAGCCTGAAGACA...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAACTTGCCCCGGCTGTTaGGCCGCATGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPETCPGC*AAWPPR
Trigger: GCGCGGCGGCCATGCGGCTCAACAGCCGGGGCAAGT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGCAACACGCATTTCAGTaGGTCAGAACTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGQHAFQ*VRTQAS
Trigger: GGAAGCTTGAGTTCTGACTCACTGAAATGCGTGTTG...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGCCCTCTCCACAAAGTaGACAGAAATGGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSALSTK*TEMEVG
Trigger: TCCAACCTCCATTTCTGTTCACTTTGTGGAGAGGGC...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTGTTATCCACAGTGCTaGAGTTCCACCTTCGATGTC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGCYPQC*SSTFDV
Trigger: GACATCGAAGGTGGAACTGCAGCACTGTGGATAACA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTCGCGGCTGCCTATCTaGATCACCCTGCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSASRLPI*ITLPKT
Trigger: TGTTTTTGGCAGGGTGATGCAGATAGGCAGCCGCGA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACAGCCCTTGGCGTGGATaGGCTCCCGCTCGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYSPWRG*APARGR
Trigger: ACGCCCGCGAGCGGGAGCGCATCCACGCCAAGGGCT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACTAAAACTTACACAGTaGCAGTCTCAGGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQLKLTQ*QSQEVS
Trigger: ACTGACCTCCTGAGACTGGCACTGTGTAAGTTTTAG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGGATGCGCCCAGGAATaGAGGGGGCGCGGACGCGCG +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEGCAQE*RGRGRA
Trigger: CGCGCGTCCGCGCCCCCTCCATTCCTGGGCGCATCC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACACTGGCGCCCGGGCCTaGACTCCCGAGTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYTGARA*TPELGQ
Trigger: CTGCCCCAACTCGGGAGTCCAGGCCCGGGCGCCAGT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACCACTAGGAAGAACTTaGAAGACATTGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQPLGRT*KTLHFQ
Trigger: CTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTGGTGCAGTGCTGAATaGCACGCAATTACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGWCSAE*HAITLL
Trigger: CAACAAGGTAATTGCGTGCCATTCAGCACTGCACCA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTCCAGAATTAATTCCATaGGCGAGAGGAGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAPELIP*ARGARR
Trigger: CCTCCGTGCTCCTCTCGCCCATGGAATTAATTCTGG...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497027.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGGCTTAATATTCCAATaGACTTCTGGGCCGAGCAAC +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGGLIFQ*TSGPSN
Trigger: GTTGCTCGGCCCAGAAGTCCATTGGAATATTAAGCC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497027.5
3UTR CAA 72 bp CTGCTCTGGTGCAGTGCTGAATGGCACGCAATTACCTaGTTGCTTGGGCTGAGAACCTGTGAATGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LLWCSAEWHAIT*LLGLRTCEWDS
Trigger: TGAATCCCATTCACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGCTGCAGAGAGGCTGTaGTCCTATAATATATACTTC +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQAAERL*SYNIYF
Trigger: GAAGTATATATTATAGGAGCACAGCCTCTCTGCAGC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAGGCTTAATATTCCAATaGACTTCTTCATGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEGLIFQ*TSSWRG
Trigger: CCCTCGCCATGAAGAAGTCCATTGGAATATTAAGCC...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAACCACTAGGAAGAACTTaGAAGACATTGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEPLGRT*KTLHFQ
Trigger: CTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGG...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTACTTGCACACAAACTaGTCCACGATCTCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAYLHTN*STISVH
Trigger: GTGCACGGAGATCGTGGACCAGTTTGTGTGCAAGTA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTATAGGTTGTCTGCTCTaGTGCAGTGCTGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAIGCLL*CSAEWH
Trigger: GTGCCATTCAGCACTGCACCAGAGCAGACAACCTAT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTATTCCAATGGACTTCTaGGCCGAGCAACAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAIPMDF*AEQQVE
Trigger: CTCCACTTGTTGCTCGGCCCAGAAGTCCATTGGAAT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497027.5
3UTR CAA 72 bp CTCTGGTGCAGTGCTGAATGGCACGCAATTACCTTGTaGCTTGGGCTGAGAACCTGTGAATGGGATTCATGT +
Preference number: 4 (lower is better)
Translates to: LWCSAEWHAITL*LGLRTCEWDSC
Trigger: ACATGAATCCCATTCACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTGCCATTCAGCACTGCACCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTACTGCATGTGGTCCTaGTACAAGTGGCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAYCMWS*YKWHSF
Trigger: GAAACTGTGCCACTTGTATCAGGACCACATGCAGTA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR TCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAACTTCGATGTCGGAATTaGTACTGGCATTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCELRCRN*YWHSLM
Trigger: CATCAAAGAATGCCAGTATCAATTCCGACATCGAAG...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGCTTCGATGTCGGAATTaGTACTGGCATTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGLRCRN*YWHSLM
Trigger: CATCAAAGAATGCCAGTATCAATTCCGACATCGAAG...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR TCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTCCGTCTGCACGGTCTTaGACTGGTCGTAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAPSARS*TGRSHG
Trigger: GCCGTGGCTACGACCAGTTCAAGACCGTGCAGACGG...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCACAGTTGGCTGAGGTaGTATGAAAGCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLHSWLR*YESQPA
Trigger: GGCAGGTTGGCTTTCATATCACCTCAGCCAACTGTG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGAACTTGGAAGACATTaGACTTCCAGCCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAELGRH*TSSHPQ
Trigger: TTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTC...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTAGGTGTTATCCACAGTaGTGCAGTTCCACCTTCGAT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSARCYPQ*CSSTFD
Trigger: ATCGAAGGTGGAACTGCAGCACTGTGGATAACACCT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACGGGAGCGGGGCTGAGTaGTGGGTGGCACCCACTACT +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYGSGAE*WVAPTT
Trigger: AGTAGTGGGTGCCACCCAGCACTCAGCCCCGCTCCC...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGACTTTCCTCCCTGCTaGCCAAATTTCATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSDFPPC*PNFMSY
Trigger: ATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTC...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAAGTATTTTAGACCTGTaGCTTCGTGCCTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQSILDL*LRAYLH
Trigger: ATGCAAATAGGCACGAAGGCACAGGTCTAAAATACT...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAACGAAGGAGAAAAATATaGCCAAAGCCACTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCERRRKI*PKPLGR
Trigger: TCTTCCTAGTGGCTTTGGCCATATTTTTCTCCTTCG...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGCGAAGGAGAAAAATATaGCCAAAGCCACTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGRRRKI*PKPLGR
Trigger: TCTTCCTAGTGGCTTTGGCCATATTTTTCTCCTTCG...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGCCACTAAGTGTTTGTaGACTGATGCTGCTAACGAT +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSATKCL*TDAAND
Trigger: ATCGTTAGCAGCATCAGTCCACAAACACTTAGTGGC...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAGCCACTAAGTGTTTGTaGACTGATGCTGCTAACGAT +
Preference number: 4 (lower is better)
Translates to: CFISCPTTKGDPVELPFGATKCL*TDAAND
Trigger: ATCGTTAGCAGCATCAGTCCACAAACACTTAGTGGC...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATCTCTCTATATATTGTaGGCCACTAAGTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQSLYIL*ATKCLW
Trigger: CCACAAACACTTAGTGGCCCACAATATATAGAGAGA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAATCTATGTAGTGGGCTaGATATTCCTTAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSIYVVG*IFLRDS
Trigger: TGAGTCCCTAAGGAATATTCAGCCCACTACATAGAT...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGAGAGCCACAGTTGGCTaGGGTGATATGAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLRATVG*GDMKAN
Trigger: GTTGGCTTTCATATCACCTCAGCCAACTGTGGCTCT...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATTGCACTTAACACAATaGACCTTTAGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQLHLTQ*TFSFQP
Trigger: TGGTTGGAAACTAAAGGTTCATTGTGTTAAGTGCAA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTCCTGAGGAGGGTGTCTaGAAAAGAGCGTCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAPEEGV*KRASPP
Trigger: GGGCGGAGACGCTCTTTTTCAGACACCCTCCTCAGG...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474267.5
CDS-3UTR GCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAATAACAGTGATACGCTaGAACACCTCTGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSITVIR*NTSVNS
Trigger: GGAATTCACAGAGGTGTTGCAGCGTATCACTGTTAT...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAGTTTTAAGGTACACCTaGAGTACAATAGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEVLRYT*STIGEA
Trigger: TGCTTCTCCTATTGTACTGCAGGTGTACCTTAAAAC...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGAGAGGTGCAATAGTTaGAGTGGTAAACACACAAAA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGERCNS*SGKHTK
Trigger: TTTTGTGTGTTTACCACTGCAACTATTGCACCTCTC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAAGCCTTCGTGCCTATTTaGATTAAATACATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQAFVPI*IKYMLQ
Trigger: TTGAAGCATGTATTTAATGCAAATAGGCACGAAGGC...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCAATGGACTTCTTCATaGCGAGGGGGAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYQWTSS*RGGGGA
Trigger: CGCGCCCCCTCCCCCTCGCCATGAAGAAGTCCATTG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTCCACTAGGAAGAACTTaGAAGACATTGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAPLGRT*KTLHFQ
Trigger: CTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGG...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTGGAATAATCCCAACTaGACTGCAGTGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAWNNPN*TAVKDN
Trigger: GTTGTCCTTCACTGCAGTCCAGTTGGGATTATTCCA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTCTCTCTATATATTGTaGGCCACTAAGTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGSLYIL*ATKCLW
Trigger: CCACAAACACTTAGTGGCCCACAATATATAGAGAGA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTGGGCTGAGAACCTGTaGATGGGATTCATGTATTAT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAWAENL*MGFMYY
Trigger: ATAATACATGAATCCCATTCACAGGTTCTCAGCCCA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAAGAACCACAAGAGTTTaGATTTGCCCAGAAATGCTA +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSRTTRV*ICPEML
Trigger: TAGCATTTCTGGGCAAATTCAAACTCTTGTGGTTCT...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTCTATCTGCATCACCCTaGCAAAAACAGAGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSALSASP*QKQRCY
Trigger: ATAACACCTCTGTTTTTGGCAGGGTGATGCAGATAG...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGGCGTTCACCACCCCTaGTGCGCTCACCGCGTATGT +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEGVHHP*CAHRVC
Trigger: ACATACGCGGTGAGCGCAGCAGGGGTGGTGAACGCC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACAAGACCTTTTATCTTaGACCAGAGAATTTACAACT +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQQDLLS*TREFTT
Trigger: AGTTGTAAATTCTCTGGTGCAAGATAAAAGGTCTTG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCCTCAGAAACAAGGTTaGTTCGTCGTGCTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLPQKQG*FVVLKV
Trigger: TACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAAGACCTGTGCCTTCGTaGCTATTTGCATTAAATACA +
Preference number: 4 (lower is better)
Translates to: CFISCPTTKGDPVELPFGRPVPS*LFALNT
Trigger: TGTATTTAATGCAAATAGGCACGAAGGCACAGGTCT...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAAGTATTTTAGACCTGTaGCTTCGTGCCTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSSILDL*LRAYLH
Trigger: ATGCAAATAGGCACGAAGGCACAGGTCTAAAATACT...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTATTTCTTTACCTTCTaGATGTGTACCATGTCCACA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGYFFTF*MCTMST
Trigger: TGTGGACATGGTACACATCCAGAAGGTAAAGAAATA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCCACCCTCTTTCAACTaGAACCTACCCATCCCATAT +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLPPSFN*NLPIPY
Trigger: ATATGGGATGGGTAGGTTCCAGTTGAAAGAGGGTGG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTTTGATGGCACTGTTTaGAAAGAGGTGTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGFDGTV*KEVSLL
Trigger: TAATAAGGACACCTCTTTCCAAACAGTGCCATCAAA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATTTGGACTAAAAATCTaGTCACGGATAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: VASSCSRYDHSRATAQAQFGLKI*SRIKAC
Trigger: ACATGCTTTTATCCGTGACCAGATTTTTAGTCCAAA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCAGAGCCACAGTTGGCTaGGGTGATATGAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLRATVG*GDMKAN
Trigger: GTTGGCTTTCATATCACCTCAGCCAACTGTGGCTCT...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGATTGTGCAAAAGACCTaGGGAGGGTGTCTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLIVQKT*GGCLKK
Trigger: CTTTTTCAGACACCCTCCTCAGGTCTTTTGCACAAT...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474267.5
CDS-3UTR GCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGATTCAAATAGAGAGGTaGAATAGTTGCAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGIQIER*NSCSGK
Trigger: TTTACCACTGCAACTATTGCACCTCTCTATTTGAAT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAATCGGGTATATGTTTTTaGAATAAAGAACACTGGTCA +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCESGICF*NKEHWS
Trigger: TGACCAGTGTTCTTTATTGCAAAAACATATACCCGA...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCGCAGTAGTCAGGGCTaGGGTCGATGTAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYRSSQG*GRCRPG
Trigger: ACCTGGTCTACATCGACCCCAGCCCTGACTACTGCG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCCAAAGGGGACCCAGTaGAGCTGCCGTTTGGAAACG +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYPKGTQ*SCRLET
Trigger: CGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGATTTGATGGCACTGTTTaGAAAGAGGTGTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: CFISCPTTKGDPVELPFGFDGTV*KEVSLL
Trigger: TAATAAGGACACCTCTTTCCAAACAGTGCCATCAAA...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAATTCTATCTTCCATTTaGCATAAGCCTTTCGATGTT +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEILSSI*HKPFDV
Trigger: AACATCGAAAGGCTTATGCCAAATGGAAGATAGAAT...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGATTCTATCTTCCATTTaGCATAAGCCTTTCGATGTT +
Preference number: 4 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGILSSI*HKPFDV
Trigger: AACATCGAAAGGCTTATGCCAAATGGAAGATAGAAT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCACTAAACTATCCGTCATaGTTTCTCCAAAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: FGNVASITSQHGGIREGSLNYPS*FLQKSP
Trigger: TGGAGATTTTTGGAGAAACCATGACGGATAGTTTAG...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAATTTGGACTAAAAATCTaGTCACGGATAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: TWPASHHNTEESERAQCEFGLKI*SRIKAC
Trigger: ACATGCTTTTATCCGTGACCAGATTTTTAGTCCAAA...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATGTCTTCAGGCTACATaGGCCGGACACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSCLQAT*AGHPMA
Trigger: TGCCATGGGGTGTCCGGCTCATGTAGCCTGAAGACA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGTGGGCTGAGAACCTGTaGATGGGATTCATGTATTAT +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLWAENL*MGFMYY
Trigger: ATAATACATGAATCCCATTCACAGGTTCTCAGCCCA...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTCACAGTTGGCTGAGGTaGTATGAAAGCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAHSWLR*YESQPA
Trigger: GGCAGGTTGGCTTTCATATCACCTCAGCCAACTGTG...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGAAACTGAAACAGATGTaGGTCCTAGAACCACAAGAG +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLKLKQM*VLEPQE
Trigger: CTCTTGTGGTTCTAGGACTCACATCTGTTTCAGTTT...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCAGGTGTTATCCACAGTaGTGCAGTTCCACCTTCGAT +
Preference number: 4 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLRCYPQ*CSSTFD
Trigger: ATCGAAGGTGGAACTGCAGCACTGTGGATAACACCT...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCTATCTGCATCACCCTaGCAAAAACAGAGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLLSASP*QKQRCY
Trigger: ATAACACCTCTGTTTTTGGCAGGGTGATGCAGATAG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTTCGCGGCTGCCTATCTaGATCACCCTGCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLASRLPI*ITLPKT
Trigger: TGTTTTTGGCAGGGTGATGCAGATAGGCAGCCGCGA...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGTTCACCACCCCTGCTaGGCTCACCGCGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEVHHPC*AHRVCE
Trigger: TTCACATACGCGGTGAGCGCAGCAGGGGTGGTGAAC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAACACCCCATGGCACTTaGAGGCCACATCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPETPHGT*RPHQPG
Trigger: ACCTGGCTGATGTGGCCTGCAAGTGCCATGGGGTGT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGACAAGACCTTTTATCTTaGACCAGAGAATTTACAACT +
Preference number: 4 (lower is better)
Translates to: CFISCPTTKGDPVELPFGQDLLS*TREFTT
Trigger: AGTTGTAAATTCTCTGGTGCAAGATAAAAGGTCTTG...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTGGGGACTTTCCTCCCTaGTGCCCAAATTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAGDFPP*CPNFMS
Trigger: GCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCCCC...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCGAAGGAGAAAAATATaGCCAAAGCCACTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLRRRKI*PKPLGR
Trigger: TCTTCCTAGTGGCTTTGGCCATATTTTTCTCCTTCG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACCAAAGGGGACCCAGTaGAGCTGCCGTTTGGAAACG +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSPKGTQ*SCRLET
Trigger: CGTTTCCAAACGGCAGCTCCACTGGGTCCCCTTTGG...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGGTTGTCTGCTCTGGTaGAGTGCTGAATGGCACGCA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSGCLLW*SAEWHA
Trigger: TGCGTGCCATTCAGCACTGCACCAGAGCAGACAACC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGGTTGTCTGCTCTGGTaGAGTGCTGAATGGCACGCA +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEGCLLW*SAEWHA
Trigger: TGCGTGCCATTCAGCACTGCACCAGAGCAGACAACC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTATTCAAATAGAGAGGTaGAATAGTTGCAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RITVLSINKRVLGAGLSAIQIER*NSCSGK
Trigger: TTTACCACTGCAACTATTGCACCTCTCTATTTGAAT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGAAAGTCCTGCCAGTTaGCTGCAGAGAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSESPAS*LQRGCA
Trigger: AGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAAGTGGAGCTGCCGTTTaGAAACGTGGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPESGAAV*KRGQHH
Trigger: GTGATGCTGGCCACGTTTCCAAACGGCAGCTCCACT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGTATACTTCTGACATCTaGACAGGGTTATTCATACCT +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLYTSDI*TGLFIP
Trigger: AGGTATGAATAACCCTGTTCAGATGTCAGAAGTATA...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACGATACTGGCATTCTTTaGTGCCTGTCTTCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYDTGIL*CLSSRL
Trigger: AAGGCGCGAAGACAGGCATCAAAGAATGCCAGTATC...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGATAGAAGCTGAATTGTaGATAGATTTCTACCACCCT +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLIEAEL*IDFYHP
Trigger: AGGGTGGTAGAAATCTATTCACAATTCAGCTTCTAT...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCCTTGTTGCTTGGGCTaGGAACCTGTGAATGGGATT +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYPCCLG*EPVNGI
Trigger: AATCCCATTCACAGGTTCTCAGCCCAAGCAACAAGG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTGCTGCAACACCTCTGTaGATTCCATTAGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAAATPL*IPLAKF
Trigger: GAACTTGGCTAATGGAATTCACAGAGGTGTTGCAGC...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCATCTATGTAGTGGGCTaGATATTCCTTAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLIYVVG*IFLRDS
Trigger: TGAGTCCCTAAGGAATATTCAGCCCACTACATAGAT...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCATATAGAAACCTTTTaGAGCTTCCAAATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLHIETF*SFQIAW
Trigger: CCAAGCTATTTGGAAGCTTCAAAAGGTTTCTATATG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACCCCAAATGTGGGCGTaGTTGTGCAAAAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSPQMWA*LCKRPE
Trigger: CTCAGGTCTTTTGCACAATCACGCCCACATTTGGGG...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474267.5
CDS-3UTR GCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTTGTTATCCACAGTGCTaGAGTTCCACCTTCGATGTC +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLACYPQC*SSTFDV
Trigger: GACATCGAAGGTGGAACTGCAGCACTGTGGATAACA...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATCGCGGCTGCCTATCTaGATCACCCTGCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSSRLPI*ITLPKT
Trigger: TGTTTTTGGCAGGGTGATGCAGATAGGCAGCCGCGA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGTGGCACCCACTACTTaGACACAAACTGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSVAPTT*TQTGPR
Trigger: TCGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCAC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTTGGTGCAGTGCTGAATaGCACGCAATTACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAWCSAE*HAITLL
Trigger: CAACAAGGTAATTGCGTGCCATTCAGCACTGCACCA...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACTGCCGTTTGGAAACGTaGCCAGCATCACATCACAAC +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYCRLET*PASHHN
Trigger: GTTGTGATGTGATGCTGGCCACGTTTCCAAACGGCA...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCTAAACTATCCGTCATaGTTTCTCCAAAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLLNYPS*FLQKSP
Trigger: TGGAGATTTTTGGAGAAACCATGACGGATAGTTTAG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGATACTGGCATTCTTTaGTGCCTGTCTTCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSDTGIL*CLSSRL
Trigger: AAGGCGCGAAGACAGGCATCAAAGAATGCCAGTATC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACGCTGCAACACCTCTGTaGATTCCATTAGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYAATPL*IPLAKF
Trigger: GAACTTGGCTAATGGAATTCACAGAGGTGTTGCAGC...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGCCCTCTCCACAAAGTaGACAGAAATGGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSALSTK*TEMEVG
Trigger: TCCAACCTCCATTTCTGTTCACTTTGTGGAGAGGGC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATTGGCTGAGGTGATATaGAAGCCAACCTGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSLAEVI*KPTCLR
Trigger: CCTTAGGCAGGTTGGCTTTCATATCACCTCAGCCAA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTGTATTGGGAAGATCTTaGATACGCTCCAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAVLGRS*IRSRMR
Trigger: TCTCATCCTGGAGCGTATTCAAGATCTTCCCAATAC...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACAAGGTTGCTTCGTCGTaGTCAAGGTATGATCACAGC +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYKVASS*SRYDHS
Trigger: GCTGTGATCATACCTTGAGCACGACGAAGCAACCTT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCGAGAGGTGCAATAGTTaGAGTGGTAAACACACAAAA +
Preference number: 4 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLERCNS*SGKHTK
Trigger: TTTTGTGTGTTTACCACTGCAACTATTGCACCTCTC...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCCACCCTCTTTCAACTaGAACCTACCCATCCCATAT +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYPPSFN*NLPIPY
Trigger: ATATGGGATGGGTAGGTTCCAGTTGAAAGAGGGTGG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAATAGGTTGTCTGCTCTaGTGCAGTGCTGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEIGCLL*CSAEWH
Trigger: GTGCCATTCAGCACTGCACCAGAGCAGACAACCTAT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAAGTTTCTTCTGTCCTTaGGAAAGTCCTGCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSSFFCP*ESPASW
Trigger: CCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACT...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTCTTCGATGTCGGAATTaGTACTGGCATTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLALRCRN*YWHSLM
Trigger: CATCAAAGAATGCCAGTATCAATTCCGACATCGAAG...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAACAACACGCATTTCAGTaGGTCAGAACTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEQHAFQ*VRTQAS
Trigger: GGAAGCTTGAGTTCTGACTCACTGAAATGCGTGTTG...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGAACTTGGAAGACATTaGACTTCCAGCCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSELGRH*TSSHPQ
Trigger: TTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACCTCAGAAACAAGGTTaGTTCGTCGTGCTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSPQKQG*FVVLKV
Trigger: TACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGG...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCTAAAACTTACACAGTaGCAGTCTCAGGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYLKLTQ*QSQEVS
Trigger: ACTGACCTCCTGAGACTGGCACTGTGTAAGTTTTAG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
3UTR CAA 72 bp TTTCTATCTCTCTATATATTGTGGGCCACTAAGTGTTaGTGGACTGATGCTGCTAACGATCTCTTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: FLSLYILWATKC*WTDAANDLLEL
Trigger: TAACTCCAAGAGATCGTTAGCAGCATCAGTCCACAAACACTTAGTGGCCCACAATATATAGAGAGATAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACAAACTGAAACAGATGTaGGTCCTAGAACCACAAGAG +
Preference number: 4 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYKLKQM*VLEPQE
Trigger: CTCTTGTGGTTCTAGGACTCACATCTGTTTCAGTTT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGGCTTAATATTCCAATaGACTTCTTCATGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEGLIFQ*TSSWRG
Trigger: CCCTCGCCATGAAGAAGTCCATTGGAATATTAAGCC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATGGAATAATCCCAACTaGACTGCAGTGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSWNNPN*TAVKDN
Trigger: GTTGTCCTTCACTGCAGTCCAGTTGGGATTATTCCA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAAGACCTGTGCCTTCGTaGCTATTTGCATTAAATACA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSRPVPS*LFALNT
Trigger: TGTATTTAATGCAAATAGGCACGAAGGCACAGGTCT...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAATAGAAGCTGAATTGTaGATAGATTTCTACCACCCT +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEIEAEL*IDFYHP
Trigger: AGGGTGGTAGAAATCTATTCACAATTCAGCTTCTAT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACATATAGAAACCTTTTaGAGCTTCCAAATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSHIETF*SFQIAW
Trigger: CCAAGCTATTTGGAAGCTTCAAAAGGTTTCTATATG...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR TCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATTGCACTTAACACAATaGACCTTTAGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSLHLTQ*TFSFQP
Trigger: TGGTTGGAAACTAAAGGTTCATTGTGTTAAGTGCAA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCAGCCTTCGTGCCTATTTaGATTAAATACATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSAFVPI*IKYMLQ
Trigger: TTGAAGCATGTATTTAATGCAAATAGGCACGAAGGC...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAATATTTCTTTACCTTCTaGATGTGTACCATGTCCACA +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEYFFTF*MCTMST
Trigger: TGTGGACATGGTACACATCCAGAAGGTAAAGAAATA...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR GCA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAATCGGGTATATGTTTTTaGAATAAAGAACACTGGTCA +
Preference number: 4 (lower is better)
Translates to: NAFLASLKGFNMLQGYPESGICF*NKEHWS
Trigger: TGACCAGTGTTCTTTATTGCAAAAACATATACCCGA...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS TCA 90 bp GGAGCAGGGCTGCGGAGTCCTCCGGCGCGCGTCCGGCGGGCGCAGTaGACCGGAGCTGAAGCGGGCACTGGCGCCCGGGCCTGGACTCCC +
Preference number: 5 (lower is better)
Translates to: GAGLRSPPARVRRAQ*TGAEAGTGARAWTP
Trigger: GGGAGTCCAGGCCCGGGCGCCAGTGCCCGCTTCAGCTCCGGTTCACTGCGCCCGCCGGACGCGCGCCGGAGGACTCCGCAGCCCTGCTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS TCA 90 bp GCGGAGTCCTCCGGCGCGCGTCCGGCGGGCGCAGTGAACCGGAGCTaGAGCGGGCACTGGCGCCCGGGCCTGGACTCCCGAGTTGGGGCA +
Preference number: 5 (lower is better)
Translates to: AESSGARPAGAVNRS*SGHWRPGLDSRVGA
Trigger: TGCCCCAACTCGGGAGTCCAGGCCCGGGCGCCAGTGCCCGCTTCAGCTCCGGTTCACTGCGCCCGCCGGACGCGCGCCGGAGGACTCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGAACTTGCCCCGGCTGTaGAGCCGCATGGCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGNLPRL*SRMAAA
Trigger: CGCGGCGGCCATGCGGCTCAACAGCCGGGGCAAGTT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAGCCTGGACTCCCGAGTaGGGGCAGAGCTGGGATGCG +
Preference number: 5 (lower is better)
Translates to: TWPASHHNTEESERAQCEAWTPE*GQSWDA
Trigger: CGCATCCCAGCTCTGCCCCAACTCGGGAGTCCAGGC...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGCCACATCAGCCAGGTaGTACACCGTCCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGATSAR*YTVLRP
Trigger: CGGCCGCAGGACGGTGTACAACCTGGCTGATGTGGC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTAACTTGCCCCGGCTGTaGAGCCGCATGGCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: RITVLSINKRVLGAGLSANLPRL*SRMAAA
Trigger: CGCGGCGGCCATGCGGCTCAACAGCCGGGGCAAGTT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGACACCCCATGGCACTaGCAGGCCACATCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGDTPWH*QATSAR
Trigger: CCTGGCTGATGTGGCCTGCAAGTGCCATGGGGTGTC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGAGGGCATCACCCACCTaGCGGAAGTCTGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGRASPT*RKSASC
Trigger: GCAGCTGGCAGACTTCCGCAAGGTGGGTGATGCCCT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS CCA 90 bp CTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTaGCACCCACTACTTGCACACAAACTGGTCCACGATCTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: LSINKRVLGAGLSAG*HPLLAHKLVHDLRA
Trigger: TGCACGGAGATCGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCACCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000493406.1
ENST00000497027.5
CDS-3UTR CAA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGCCACATCAGCCAGGTaGTACACCGTCCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: RITVLSINKRVLGAGLSAATSAR*YTVLRP
Trigger: CGGCCGCAGGACGGTGTACAACCTGGCTGATGTGGC...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTTGACCTGTACCAACTaGCCCCGGCTGTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGLTCTN*PRLLSR
Trigger: GCGGCTCAACAGCCGGGGCAAGTTGGTACAGGTCAA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS GCA 90 bp CACCCACGCAACCTCACCAGGAAATCTGATTTCGCTGGGATCCTGTaGGCGGGGCACGCCAGCGATTACAAACGTGTCTCAATTCTGTTG +
Preference number: 5 (lower is better)
Translates to: HPRNLTRKSDFAGIL*AGHASDYKRVSILL
Trigger: CAACAGAATTGAGACACGTTTGTAATCGCTGGCGTGCCCCGCGCACAGGATCCCAGCGAAATCAGATTTCCTGGTGAGGTTGCGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS-3UTR CAA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGGCCTGGACTCCCGAGTaGGGGCAGAGCTGGGATGCG +
Preference number: 5 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLAWTPE*GQSWDA
Trigger: CGCATCCCAGCTCTGCCCCAACTCGGGAGTCCAGGC...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGAGAAAGTCCTGCCAGTaGGCTGCAGAGAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGRKSCQ*AAERLC
Trigger: GCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTAGGGCATCACCCACCTaGCGGAAGTCTGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RITVLSINKRVLGAGLSARASPT*RKSASC
Trigger: GCAGCTGGCAGACTTCCGCAAGGTGGGTGATGCCCT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGGTGGCACCCACTACTaGCACACAAACTGGTCCACG +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGGGTHY*HTNWST
Trigger: CGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCACC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS TCA 90 bp GCATTCTCCAGCTTACGTGCAGCAGCTCCAAGAAGTGGCAGGATATaGGCTGACTATGAAAGGGGCTGCCAAAGGGCGCTCCCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: AFSSLRAAAPRSGRI*ADYERGCQRALPKN
Trigger: ATTCTTCGGGAGCGCCCTTTGGCAGCCCCTTTCATAGTCAGCTCATATCCTGCCACTTCTTGGAGCTGCTGCACGTAAGCTGGAGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS CCA 90 bp GGAAGTCGGTGTTGGTTAGTGGTTAAGAGTGCCAGCTGTGGAATCTaGAGTTCCAGTCCCTGCCCTGCCACTTTCCAGCTGTCACACCTT +
Preference number: 5 (lower is better)
Translates to: GSRCWLVVKSASCGI*SSSPCPATFQLSHL
Trigger: AAGGTGTGACAGCTGGAAAGTGGCAGGGCAGGGACTGGAACTCCAGATTCCACAGCTGGCACTCTTAACCACTAACCAACACCGACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGAGTTGAAGCGGCTGTaGACCTGTACCAACTTGCCC +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGELKRL*TCTNLP
Trigger: GGGCAAGTTGGTACAGGTCAACAGCCGCTTCAACTC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGGTGGCACCCACTACTaGCACACAAACTGGTCCACG +
Preference number: 5 (lower is better)
Translates to: FGNVASITSQHGGIREGSGGTHY*HTNWST
Trigger: CGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCACC...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAGGTGGCACCCACTACTaGCACACAAACTGGTCCACG +
Preference number: 5 (lower is better)
Translates to: CFISCPTTKGDPVELPFGGGTHY*HTNWST
Trigger: CGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCACC...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TTTGGAAACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCACAGTGGAGCTGCCGTTaGGAAACGTGGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: FGNVASITSQHGGIREGSQWSCR*ETWPAS
Trigger: TGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTG...TGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGTTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTTGTGTGGTGGGCGAGTaGAAGCGGCTGTTGACCTGT +
Preference number: 5 (lower is better)
Translates to: RITVLSINKRVLGAGLSACVVGE*KRLLTC
Trigger: ACAGGTCAACAGCCGCTTCAACTCGCCCACCACACA...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGATGTAGACCAGGTCTaGTGTGGTGGGCGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGDVDQV*CGGRVE
Trigger: TTCAACTCGCCCACCACACAAGACCTGGTCTACATC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATCCTCAGAAACAAGGTaGCTTCGTCGTGCTCAAGGT +
Preference number: 5 (lower is better)
Translates to: VASSCSRYDHSRATAQAQSSETR*LRRAQG
Trigger: ACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGGA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS CCA 90 bp CCTGGGCGAAGGAGAAAAATATGGCCAAAGCCACTAGGAAGAACTTaGAAGACATTGCACTTCCAGCCATCCCCAAAGCAACTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PGRRRKIWPKPLGRT*KTLHFQPSPKQLLG
Trigger: GCCCAGGAGTTGCTTTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGCTTTGGCCATATTTTTCTCCTTCGCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS-3UTR CAA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAAGAACTTGGAAGACATaGCACTTCCAGCCATCCCCA +
Preference number: 5 (lower is better)
Translates to: TWPASHHNTEESERAQCERTWKT*HFQPSP
Trigger: TGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCT...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: VASSCSRYDHSRATAQAQQFLLS*RKSCQL
Trigger: CAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTCCTCAGAAACAAGGTaGCTTCGTCGTGCTCAAGGT +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGSSETR*LRRAQG
Trigger: ACCTTGAGCACGACGAAGCAACCTTGTTTCTGAGGA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAATGGGCCACTAAGTGTTaGTGGACTGATGCTGCTAAC +
Preference number: 5 (lower is better)
Translates to: TWPASHHNTEESERAQCEWATKC*WTDAAN
Trigger: GTTAGCAGCATCAGTCCACAAACACTTAGTGGCCCA...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS TCA 90 bp TGCTGCAGTTCCACCTTCGATGTCGGAATTGATACTGGCATTCTTTaGTGCCTGTCTTCGCGCCTTCTCCGATGTACTGCATGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: CCSSTFDVGIDTGIL*CLSSRLLRCTACGP
Trigger: AGGACCACATGCAGTACATCGGAGAAGGCGCGAAGACAGGCATCAAAGAATGCCAGTATCAATTCCGACATCGAAGGTGGAACTGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS TCA 90 bp TTCTTTTTCCAAATTAATCCACCCACGCAACCTCACCAGGAAATCTaGTTTCGCTGGGATCCTGTGCGCGGGGCACGCCAGCGATTACAA +
Preference number: 5 (lower is better)
Translates to: FFFQINPPTQPHQEI*FRWDPVRGARQRLQ
Trigger: TTGTAATCGCTGGCGTGCCCCGCGCACAGGATCCCAGCGAAATCAGATTTCCTGGTGAGGTTGCGTGGGTGGATTAATTTGGAAAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGGCCACTAGGAAGAACTaGGAAGACATTGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGATRKN*EDIALP
Trigger: TGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGC...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTTTTCCTCAAATAGGTaGTCTGCTCTGGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGFSSNR*SALVQC
Trigger: GCACTGCACCAGAGCAGACAACCTATTTGAGGAAAA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTAGAACTTGGAAGACATaGCACTTCCAGCCATCCCCA +
Preference number: 5 (lower is better)
Translates to: RITVLSINKRVLGAGLSARTWKT*HFQPSP
Trigger: TGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCT...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAGCCACTAGGAAGAACTaGGAAGACATTGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: CFISCPTTKGDPVELPFGATRKN*EDIALP
Trigger: TGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGC...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTGTATTGGGAAGATCTaGAATACGCTCCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGCIGKI*NTLQDE
Trigger: CTCATCCTGGAGCGTATTCAAGATCTTCCCAATACA...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AGAATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTCAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: RITVLSINKRVLGAGLSAQFLLS*RKSCQL
Trigger: CAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTG...AGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGCCTTCGATGTCGGAATaGATACTGGCATTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGPSMSE*ILAFFD
Trigger: ATCAAAGAATGCCAGTATCAATTCCGACATCGAAGG...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000497027.5
CDS-3UTR CAA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTGACACCCCATGGCACTaGCAGGCCACATCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLADTPWH*QATSAR
Trigger: CCTGGCTGATGTGGCCTGCAAGTGCCATGGGGTGTC...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACTGCAAATGGAATATTaGAGGAGAATGAGACATGTG +
Preference number: 5 (lower is better)
Translates to: VASSCSRYDHSRATAQAQLQMEY*RRMRHV
Trigger: CACATGTCTCATTCTCCTCAAATATTCCATTTGCAG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAATGCTTTCAAGATCTTTaGCTCACAATTCACTGCAAC +
Preference number: 5 (lower is better)
Translates to: VASSCSRYDHSRATAQAQCFQDL*LTIHCN
Trigger: GTTGCAGTGAATTGTGAGCAAAAGATCTTGAAAGCA...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACCCATAATGACTATTTaGAACATGGCTCTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VASSCSRYDHSRATAQAQPIMTI*NMALLL
Trigger: CAGCAAAAGAGCCATGTTCAAAATAGTCATTATGGG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS CCA 90 bp CACTTCCAGCCATCCCCAAAGCAACTCCTGGGCTTAATATTCCAATaGACTTCTGGAGAGGGAAGAAAGGAGCAGATGTTTATTGCCTCT +
Preference number: 5 (lower is better)
Translates to: HFQPSPKQLLGLIFQ*TSGEGRKEQMFIAS
Trigger: AGAGGCAATAAACATCTGCTCCTTTCTTCCCTCTCCAGAAGTCCATTGGAATATTAAGCCCAGGAGTTGCTTTGGGGATGGCTGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS CCA 90 bp TGCTATTTCCTGTTCTGCAGTCTTTCCTCTAGTGGAAGTCGGTGTTaGTTAGTGGTTAAGAGTGCCAGCTGTGGAATCTGGAGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: CYFLFCSLSSSGSRC*LVVKSASCGIWSSS
Trigger: ACTGGAACTCCAGATTCCACAGCTGGCACTCTTAACCACTAACCAACACCGACTTCCACTAGAGGAAAGACTGCAGAACAGGAAATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACGACACCCCATGGCACTaGCAGGCCACATCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYDTPWH*QATSAR
Trigger: CCTGGCTGATGTGGCCTGCAAGTGCCATGGGGTGTC...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACAGGGCATCACCCACCTaGCGGAAGTCTGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYRASPT*RKSASC
Trigger: GCAGCTGGCAGACTTCCGCAAGGTGGGTGATGCCCT...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAACTGCAAATGGAATATTaGAGGAGAATGAGACATGTG +
Preference number: 5 (lower is better)
Translates to: TWPASHHNTEESERAQCELQMEY*RRMRHV
Trigger: CACATGTCTCATTCTCCTCAAATATTCCATTTGCAG...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GTTGCTTCGTCGTGCTCAAGGTATGATCACAGCAGGGCCACAGCCCAAGCTCAACCAAATAGCTTGGTTTaGGTAAAATTCACCACTCTT +
Preference number: 5 (lower is better)
Translates to: VASSCSRYDHSRATAQAQPNSLV*VKFTTL
Trigger: AAGAGTGGTGAATTTTACCAAAACCAAGCTATTTGG...TTGAGCTTGGGCTGTGGCCCTGCTGTGATCATACCTTGAGCACGACGAAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGGCTGCTAACGATCTCTaGGAGTTAGCTAGTACCGGT +
Preference number: 5 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLAANDL*ELASTG
Trigger: ACCGGTACTAGCTAACTCCAAGAGATCGTTAGCAGC...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGGCCACTAGGAAGAACTaGGAAGACATTGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLATRKN*EDIALP
Trigger: TGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGC...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTAGAAAGTCCTGCCAGTaGGCTGCAGAGAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLARKSCQ*AAERLC
Trigger: GCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCT...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACTTGACCTGTACCAACTaGCCCCGGCTGTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYLTCTN*PRLLSR
Trigger: GCGGCTCAACAGCCGGGGCAAGTTGGTACAGGTCAA...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTTGTGTGGTGGGCGAGTaGAAGCGGCTGTTGACCTGT +
Preference number: 5 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLACVVGE*KRLLTC
Trigger: ACAGGTCAACAGCCGCTTCAACTCGCCCACCACACA...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAAGTGTCCAGAATCATTaGGGGATCTTTTTACAATCT +
Preference number: 5 (lower is better)
Translates to: TWPASHHNTEESERAQCESVQNH*GIFLQS
Trigger: AGATTGTAAAAAGATCCCCAAATGATTCTGGACACT...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ATCACTGTACTTTCTATAAATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGAGTGTCCAGAATCATTaGGGGATCTTTTTACAATCT +
Preference number: 5 (lower is better)
Translates to: ITVLSINKRVLGAGLSAGSVQNH*GIFLQS
Trigger: AGATTGTAAAAAGATCCCCAAATGATTCTGGACACT...CCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATTTATAGAAAGTACAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp ACGTGGCCAGCATCACATCACAACACGGAGGAATCAGAGAGGGCTCAGTGTGAAAAGCTTCCAAATAGCTaGGTTTTGGTAAAATTCACC +
Preference number: 5 (lower is better)
Translates to: TWPASHHNTEESERAQCEKLPNS*VLVKFT
Trigger: GGTGAATTTTACCAAAACCAAGCTATTTGGAAGCTT...TTCACACTGAGCCCTCTCTGATTCCTCCGTGTTGTGATGTGATGCTGGCCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS CCA 90 bp GCCATCCCCAAAGCAACTCCTGGGCTTAATATTCCAATGGACTTCTaGAGAGGGAAGAAAGGAGCAGATGTTTATTGCCTCTCAGATAAT +
Preference number: 5 (lower is better)
Translates to: AIPKATPGLNIPMDF*RGKKGADVYCLSDN
Trigger: ATTATCTGAGAGGCAATAAACATCTGCTCCTTTCTTCCCTCTCCAGAAGTCCATTGGAATATTAAGCCCAGGAGTTGCTTTGGGGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS-3UTR CAA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTGAGTTGAAGCGGCTGTaGACCTGTACCAACTTGCCC +
Preference number: 5 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAELKRL*TCTNLP
Trigger: GGGCAAGTTGGTACAGGTCAACAGCCGCTTCAACTC...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACTGTGTGGTGGGCGAGTaGAAGCGGCTGTTGACCTGT +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYCVVGE*KRLLTC
Trigger: ACAGGTCAACAGCCGCTTCAACTCGCCCACCACACA...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AGTGTGAAGAGGAAGGTGGATTTCACTGTTTTTCCTCAAATAGGTTGTCTGCTCCACGCAATTACCTTGTaGCTTGGGCTGAGAACCTGT +
Preference number: 5 (lower is better)
Translates to: SVKRKVDFTVFPQIGCLLHAITL*LGLRTC
Trigger: ACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTG...GAGCAGACAACCTATTTGAGGAAAAACAGTGAAATCCACCTTCCTCTTCACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCAGTGGAGCTGCCGTTaGGAAACGTGGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYQWSCR*ETWPAS
Trigger: TGATGCTGGCCACGTTTCCAAACGGCAGCTCCACTG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TGTTTCATTTCCTGTCCTACAACCAAAGGGGACCCAGTGGAGCTGCCGTTTGGAGAGATAAGAACATATTaGATGGCACTGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: CFISCPTTKGDPVELPFGEIRTY*MALFGK
Trigger: CTTTCCAAACAGTGCCATCAAATATGTTCTTATCTC...TCCAAACGGCAGCTCCACTGGGTCCCCTTTGGTTGTAGGACAGGAAATGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS TCA 90 bp TGGCTGCAGAGAGGCTGTGCTCCTATAATATATACTTCTGACATCTaGACAGGGTTATTCATACCTAGCGACCACCAAGAATTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: WLQRGCAPIIYTSDI*TGLFIPSDHQELAS
Trigger: TGAAGCCAATTCTTGGTGGTCGCTAGGTATGAATAACCCTGTTCAGATGTCAGAAGTATATATTATAGGAGCACAGCCTCTCTGCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS-3UTR CAA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGCCTTCGATGTCGGAATaGATACTGGCATTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLPSMSE*ILAFFD
Trigger: ATCAAAGAATGCCAGTATCAATTCCGACATCGAAGG...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS GCA 90 bp ATCCAAAACTTATCATCAGGTGTAGGGACAGGAATTAACATCATTTaGTATAATGACAAAAATGCCCAAGCCACCACCCGAGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: IQNLSSGVGTGINII*YNDKNAQATTRAGR
Trigger: CCTTCCAGCTCGGGTGGTGGCTTGGGCATTTTTGTCATTATAGCAAATGATGTTAATTCCTGTCCCTACACCTGATGATAAGTTTTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497817.1
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGAGTTGAAGCGGCTGTaGACCTGTACCAACTTGCCC +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEELKRL*TCTNLP
Trigger: GGGCAAGTTGGTACAGGTCAACAGCCGCTTCAACTC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACGATGTAGACCAGGTCTaGTGTGGTGGGCGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYDVDQV*CGGRVE
Trigger: TTCAACTCGCCCACCACACAAGACCTGGTCTACATC...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTTGGGCCACTAAGTGTTaGTGGACTGATGCTGCTAAC +
Preference number: 5 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAWATKC*WTDAAN
Trigger: GTTAGCAGCATCAGTCCACAAACACTTAGTGGCCCA...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGATGTAGACCAGGTCTaGTGTGGTGGGCGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEDVDQV*CGGRVE
Trigger: TTCAACTCGCCCACCACACAAGACCTGGTCTACATC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCACGCAATTACCTTGTaGCTTGGGCTGAGAACCTGT +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYHAITL*LGLRTC
Trigger: ACAGGTTCTCAGCCCAAGCAACAAGGTAATTGCGTG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp GGACTTTCCTCCCTGCTGCCCAAATTTCATGAGCTATTAGAATATGACGGTCTGGAGATAAGAACATATTaGATGGCACTGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: GLSSLLPKFHELLEYDGLEIRTY*MALFGK
Trigger: CTTTCCAAACAGTGCCATCAAATATGTTCTTATCTC...CAGACCGTCATATTCTAATAGCTCATGAAATTTGGGCAGCAGGGAGGAAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAAGAACTTGGAAGACATaGCACTTCCAGCCATCCCCA +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPERTWKT*HFQPSP
Trigger: TGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYQFLLS*RKSCQL
Trigger: CAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAGCTGCTAACGATCTCTaGGAGTTAGCTAGTACCGGT +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEAANDL*ELASTG
Trigger: ACCGGTACTAGCTAACTCCAAGAGATCGTTAGCAGC...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAATTTTCCTCAAATAGGTaGTCTGCTCTGGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEFSSNR*SALVQC
Trigger: GCACTGCACCAGAGCAGACAACCTATTTGAGGAAAA...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCCTTCGATGTCGGAATaGATACTGGCATTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYPSMSE*ILAFFD
Trigger: ATCAAAGAATGCCAGTATCAATTCCGACATCGAAGG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAATGTATTGGGAAGATCTaGAATACGCTCCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPECIGKI*NTLQDE
Trigger: CTCATCCTGGAGCGTATTCAAGATCTTCCCAATACA...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACCCAAGACCTTTTATCTaGCACCAGAGAATTTACAAC +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYPRPFI*HQRIYN
Trigger: GTTGTAAATTCTCTGGTGCAAGATAAAAGGTCTTGG...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACTGGCTTGGAATAATGCATTCTaGGCATCCTTAAAAGGTTTC +
Preference number: 5 (lower is better)
Translates to: CSRQRNNPRVNCKSKSLAWNNAF*ASLKGF
Trigger: GAAACCTTTTAAGGATGCCAAGAATGCATTATTCCA...AGCCAGTGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCATGCTTTCAAGATCTTTaGCTCACAATTCACTGCAAC +
Preference number: 5 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSCFQDL*LTIHCN
Trigger: GTTGCAGTGAATTGTGAGCAAAAGATCTTGAAAGCA...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp TCATTCTTCTCTGGGATGTTACAACAGCAACACGCTCTAAAACAATTAAGTTACTGGAATAATGCATTCTaGGCATCCTTAAAAGGTTTC +
Preference number: 5 (lower is better)
Translates to: SFFSGMLQQQHALKQLSYWNNAF*ASLKGF
Trigger: GAAACCTTTTAAGGATGCCAAGAATGCATTATTCCA...GTAACTTAATTGTTTTAGAGCGTGTTGCTGTTGTAACATCCCAGAGAAGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAACCCATAATGACTATTTaGAACATGGCTCTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEPIMTI*NMALLL
Trigger: CAGCAAAAGAGCCATGTTCAAAATAGTCATTATGGG...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp CAACAATGCTCTAGACAGAGAAATAACCCCAGAGTAAACTGTAAATCTAAATCACCAAATAGCTTGGTTTaGGTAAAATTCACCACTCTT +
Preference number: 5 (lower is better)
Translates to: QQCSRQRNNPRVNCKSKSPNSLV*VKFTTL
Trigger: AAGAGTGGTGAATTTTACCAAAACCAAGCTATTTGG...TGATTTAGATTTACAGTTTACTCTGGGGTTATTTCTCTGTCTAGAGCATTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS-3UTR CAA 90 bp AATGCATTCTTGGCATCCTTAAAAGGTTTCAATATGTTACAAGGTTATCCGGAAAAGCTTCCAAATAGCTaGGTTTTGGTAAAATTCACC +
Preference number: 5 (lower is better)
Translates to: NAFLASLKGFNMLQGYPEKLPNS*VLVKFT
Trigger: GGTGAATTTTACCAAAACCAAGCTATTTGGAAGCTT...TTCCGGATAACCTTGTAACATATTGAAACCTTTTAAGGATGCCAAGAATGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS TCA 72 bp CTGCGGAGTCCTCCGGCGCGCGTCCGGCGGGCGCAGTaGACCGGAGCTGAAGCGGGCACTGGCGCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: LRSPPARVRRAQ*TGAEAGTGARA
Trigger: GGCCCGGGCGCCAGTGCCCGCTTCAGCTCCGGTTCACTGCGCCCGCCGGACGCGCGCCGGAGGACTCCGCAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS TCA 72 bp TCCGGCGCGCGTCCGGCGGGCGCAGTGAACCGGAGCTaGAGCGGGCACTGGCGCCCGGGCCTGGACTCCCGA +
Preference number: 6 (lower is better)
Translates to: SGARPAGAVNRS*SGHWRPGLDSR
Trigger: TCGGGAGTCCAGGCCCGGGCGCCAGTGCCCGCTTCAGCTCCGGTTCACTGCGCCCGCCGGACGCGCGCCGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS CAA 90 bp ACCGGAGCTGAAGCGGGCACTGGCGCCCGGGCCTGGACTCCCGAGTaGGGGCAGAGCTGGGATGCGCCCAGGAATGGAGGGGGCGCGGAC +
Preference number: 6 (lower is better)
Translates to: TGAEAGTGARAWTPE*GQSWDAPRNGGGAD
Trigger: GTCCGCGCCCCCTCCATTCCTGGGCGCATCCCAGCTCTGCCCCAACTCGGGAGTCCAGGCCCGGGCGCCAGTGCCCGCTTCAGCTCCGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264634.9
ENST00000474267.5
CDS GCA 72 bp GGATGCGAGCACTCTCGTAGGAGCCCTTGGCGTGGATaGGCTCCCGCTCGCGGGCGTCCACGAACTCCTTGG +
Preference number: 6 (lower is better)
Translates to: GCEHSRRSPWRG*APARGRPRTPW
Trigger: CCAAGGAGTTCGTGGACGCCCGCGAGCGGGAGCGCATCCACGCCAAGGGCTCCTACGAGAGTGCTCGCATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
CDS CCA 72 bp AATAAGCGGGTCCTGGGAGCGGGGCTGAGTGCTGGGTaGCACCCACTACTTGCACACAAACTGGTCCACGAT +
Preference number: 6 (lower is better)
Translates to: NKRVLGAGLSAG*HPLLAHKLVHD
Trigger: ATCGTGGACCAGTTTGTGTGCAAGTAGTGGGTGCCACCCAGCACTCAGCCCCGCTCCCAGGACCCGCTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000493406.1
ENST00000497027.5
CDS CAA 72 bp CCAGTCCCTGCCCTGCCACTTTCCAGCTGTCACACCTaGTCTAGCCTCTCAGCCAGCACTTCAGAACCCTCT +
Preference number: 6 (lower is better)
Translates to: PVPALPLSSCHT*SSLSASTSEPS
Trigger: AGAGGGTTCTGAAGTGCTGGCTGAGAGGCTAGACAAGGTGTGACAGCTGGAAAGTGGCAGGGCAGGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS TCA 72 bp CAAATTAATCCACCCACGCAACCTCACCAGGAAATCTaGTTTCGCTGGGATCCTGTGCGCGGGGCACGCCAG +
Preference number: 6 (lower is better)
Translates to: QINPPTQPHQEI*FRWDPVRGARQ
Trigger: CTGGCGTGCCCCGCGCACAGGATCCCAGCGAAATCAGATTTCCTGGTGAGGTTGCGTGGGTGGATTAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS TCA 72 bp AGCTTACGTGCAGCAGCTCCAAGAAGTGGCAGGATATaGGCTGACTATGAAAGGGGCTGCCAAAGGGCGCTC +
Preference number: 6 (lower is better)
Translates to: SLRAAAPRSGRI*ADYERGCQRAL
Trigger: GAGCGCCCTTTGGCAGCCCCTTTCATAGTCAGCTCATATCCTGCCACTTCTTGGAGCTGCTGCACGTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS GCA 72 bp AACCTCACCAGGAAATCTGATTTCGCTGGGATCCTGTaGGCGGGGCACGCCAGCGATTACAAACGTGTCTCA +
Preference number: 6 (lower is better)
Translates to: NLTRKSDFAGIL*AGHASDYKRVS
Trigger: TGAGACACGTTTGTAATCGCTGGCGTGCCCCGCGCACAGGATCCCAGCGAAATCAGATTTCCTGGTGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS CAA 90 bp TCTGGAGTTCCAGTCCCTGCCCTGCCACTTTCCAGCTGTCACACCTaGTCTAGCCTCTCAGCCAGCACTTCAGAACCCTCTTACACACAA +
Preference number: 6 (lower is better)
Translates to: SGVPVPALPLSSCHT*SSLSASTSEPSYTQ
Trigger: TTGTGTGTAAGAGGGTTCTGAAGTGCTGGCTGAGAGGCTAGACAAGGTGTGACAGCTGGAAAGTGGCAGGGCAGGGACTGGAACTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS CAA 72 bp GTGGTCCTGATACAAGTGGCACAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTGGCTGCAGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: VVLIQVAQFLLS*RKSCQLAAERL
Trigger: CAGCCTCTCTGCAGCCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTGTGCCACTTGTATCAGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CAA 90 bp ACCTGGGCGAAGGAGAAAAATATGGCCAAAGCCACTAGGAAGAACTaGGAAGACATTGCACTTCCAGCCATCCCCAAAGCAACTCCTGGG +
Preference number: 6 (lower is better)
Translates to: TWAKEKNMAKATRKN*EDIALPAIPKATPG
Trigger: CCCAGGAGTTGCTTTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGCTTTGGCCATATTTTTCTCCTTCGCCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CAA 90 bp GTACTGCATGTGGTCCTGATACAAGTGGCACAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTGGCTGCAGAGAGGCTGTGCTCCTAT +
Preference number: 6 (lower is better)
Translates to: VLHVVLIQVAQFLLS*RKSCQLAAERLCSY
Trigger: ATAGGAGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTGTGCCACTTGTATCAGGACCACATGCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CAA 72 bp ATATGGCCAAAGCCACTAGGAAGAACTTGGAAGACATaGCACTTCCAGCCATCCCCAAAGCAACTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: IWPKPLGRTWKT*HFQPSPKQLLG
Trigger: GCCCAGGAGTTGCTTTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGCTTTGGCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CAA 72 bp ATCCACAGTGCTGCAGTTCCACCTTCGATGTCGGAATaGATACTGGCATTCTTTGATGCCTGTCTTCGCGCC +
Preference number: 6 (lower is better)
Translates to: IHSAAVPPSMSE*ILAFFDACLRA
Trigger: GGCGCGAAGACAGGCATCAAAGAATGCCAGTATCAATTCCGACATCGAAGGTGGAACTGCAGCACTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CAA 90 bp AGAGGTGTTATCCACAGTGCTGCAGTTCCACCTTCGATGTCGGAATaGATACTGGCATTCTTTGATGCCTGTCTTCGCGCCTTCTCCGAT +
Preference number: 6 (lower is better)
Translates to: RGVIHSAAVPPSMSE*ILAFFDACLRAFSD
Trigger: ATCGGAGAAGGCGCGAAGACAGGCATCAAAGAATGCCAGTATCAATTCCGACATCGAAGGTGGAACTGCAGCACTGTGGATAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS TCA 72 bp TCCACCTTCGATGTCGGAATTGATACTGGCATTCTTTaGTGCCTGTCTTCGCGCCTTCTCCGATGTACTGCA +
Preference number: 6 (lower is better)
Translates to: STFDVGIDTGIL*CLSSRLLRCTA
Trigger: TGCAGTACATCGGAGAAGGCGCGAAGACAGGCATCAAAGAATGCCAGTATCAATTCCGACATCGAAGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS GCA 72 bp TCACCCTGCCAAAAACAGAGGTGTTATCCACAGTGCTaGAGTTCCACCTTCGATGTCGGAATTGATACTGGC +
Preference number: 6 (lower is better)
Translates to: SPCQKQRCYPQC*SSTFDVGIDTG
Trigger: GCCAGTATCAATTCCGACATCGAAGGTGGAACTGCAGCACTGTGGATAACACCTCTGTTTTTGGCAGGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CCA 72 bp CTGTTCTGCAGTCTTTCCTCTAGTGGAAGTCGGTGTTaGTTAGTGGTTAAGAGTGCCAGCTGTGGAATCTGG +
Preference number: 6 (lower is better)
Translates to: LFCSLSSSGSRC*LVVKSASCGIW
Trigger: CCAGATTCCACAGCTGGCACTCTTAACCACTAACCAACACCGACTTCCACTAGAGGAAAGACTGCAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS GCA 72 bp GCATCACCCTGCCAAAAACAGAGGTGTTATCCACAGTaGTGCAGTTCCACCTTCGATGTCGGAATTGATACT +
Preference number: 6 (lower is better)
Translates to: ASPCQKQRCYPQ*CSSTFDVGIDT
Trigger: AGTATCAATTCCGACATCGAAGGTGGAACTGCAGCACTGTGGATAACACCTCTGTTTTTGGCAGGGTGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CCA 72 bp CCATCCCCAAAGCAACTCCTGGGCTTAATATTCCAATaGACTTCTGGAGAGGGAAGAAAGGAGCAGATGTTT +
Preference number: 6 (lower is better)
Translates to: PSPKQLLGLIFQ*TSGEGRKEQMF
Trigger: AAACATCTGCTCCTTTCTTCCCTCTCCAGAAGTCCATTGGAATATTAAGCCCAGGAGTTGCTTTGGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS CAA 90 bp AGGAGAAAAATATGGCCAAAGCCACTAGGAAGAACTTGGAAGACATaGCACTTCCAGCCATCCCCAAAGCAACTCCTGGGCTTAATATTC +
Preference number: 6 (lower is better)
Translates to: RRKIWPKPLGRTWKT*HFQPSPKQLLGLIF
Trigger: GAATATTAAGCCCAGGAGTTGCTTTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGCTTTGGCCATATTTTTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CAA 90 bp GTTCGTGTAGAGGATCCTATTCTGCTTCTCTCCAATTGCCTTTGCTaGTATAGACACAGCCCAAACAGTGCTATTTCCTGTTCTGCAGTC +
Preference number: 6 (lower is better)
Translates to: VRVEDPILLLSNCLC*YRHSPNSAISCSAV
Trigger: GACTGCAGAACAGGAAATAGCACTGTTTGGGCTGTGTCTATACAAGCAAAGGCAATTGGAGAGAAGCAGAATAGGATCCTCTACACGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS CCA 72 bp AGGAGAAAAATATGGCCAAAGCCACTAGGAAGAACTTaGAAGACATTGCACTTCCAGCCATCCCCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: RRKIWPKPLGRT*KTLHFQPSPKQ
Trigger: TTGCTTTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGCTTTGGCCATATTTTTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS CAA 72 bp AAGGAGAAAAATATGGCCAAAGCCACTAGGAAGAACTaGGAAGACATTGCACTTCCAGCCATCCCCAAAGCA +
Preference number: 6 (lower is better)
Translates to: KEKNMAKATRKN*EDIALPAIPKA
Trigger: TGCTTTGGGGATGGCTGGAAGTGCAATGTCTTCCAAGTTCTTCCTAGTGGCTTTGGCCATATTTTTCTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1
CDS GCA 72 bp GTAGAGGATCCTATTCTGCTTCTCTCCAATTGCCTTTaGTTGTATAGACACAGCCCAAACAGTGCTATTTCC +
Preference number: 6 (lower is better)
Translates to: VEDPILLLSNCL*LYRHSPNSAIS
Trigger: GGAAATAGCACTGTTTGGGCTGTGTCTATACAAGCAAAGGCAATTGGAGAGAAGCAGAATAGGATCCTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS CCA 72 bp AAAGCAACTCCTGGGCTTAATATTCCAATGGACTTCTaGAGAGGGAAGAAAGGAGCAGATGTTTATTGCCTC +
Preference number: 6 (lower is better)
Translates to: KATPGLNIPMDF*RGKKGADVYCL
Trigger: GAGGCAATAAACATCTGCTCCTTTCTTCCCTCTCCAGAAGTCCATTGGAATATTAAGCCCAGGAGTTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482079.1
CDS CAA 72 bp GAGGATCCTATTCTGCTTCTCTCCAATTGCCTTTGCTaGTATAGACACAGCCCAAACAGTGCTATTTCCTGT +
Preference number: 6 (lower is better)
Translates to: EDPILLLSNCLC*YRHSPNSAISC
Trigger: ACAGGAAATAGCACTGTTTGGGCTGTGTCTATACAAGCAAAGGCAATTGGAGAGAAGCAGAATAGGATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624674.1
CDS TCA 72 bp AGAGGCTGTGCTCCTATAATATATACTTCTGACATCTaGACAGGGTTATTCATACCTAGCGACCACCAAGAA +
Preference number: 6 (lower is better)
Translates to: RGCAPIIYTSDI*TGLFIPSDHQE
Trigger: TTCTTGGTGGTCGCTAGGTATGAATAACCCTGTTCAGATGTCAGAAGTATATATTATAGGAGCACAGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264634.9
ENST00000474267.5
ENST00000482079.1
ENST00000497027.5
ENST00000497817.1