RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000108379, ENSG00000277626

Ensembl transcript IDs: ENST00000225512.6, ENST00000572508.1, ENST00000573788.5, ENST00000576471.1, ENST00000611547.1, ENST00000616347.2, ENST00000631815.1, ENST00000632508.1, ENST00000633989.1

Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCTGACGCTGAGGGCTGTGCCCGGCTCTAGGTCCTGCTTCCCATaGGACTTCGCTGAATCCGCCCAGCCACACACTTCACCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: CLTLRAVPGSRSCFP*DFAESAQPHTSPLP
Trigger: GGGAAGGGGTGAAGTGTGTGGCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAGCCCTCAGCGTCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR GCA 90 bp TTGGGTCTGGGTCATTTACCACGCGTGCGGCTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCTGTGCCCGGCTCTAGGTCCTGCTTC +
Preference number: 1 (lower is better)
Translates to: LGLGHLPRVRLVTVP*CLTLRAVPGSRSCF
Trigger: GAAGCAGGACCTAGAGCCGGGCACAGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAGCCGCACGCGTGGTAAATGACCCAGACCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR TCA 90 bp GGAGTGGACCAAGAAAAGGAGACTGCAGGGGTGTGTCCTACTTCCTaGCTCCCACCCTCCAGGCGTCTTGGAATGTCACCAGAAGCAGCA +
Preference number: 1 (lower is better)
Translates to: GVDQEKETAGVCPTS*LPPSRRLGMSPEAA
Trigger: TGCTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGTGGGAGTCAGGAAGTAGGACACACCCCTGCAGTCTCCTTTTCTTGGTCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR GCA 90 bp GAACACATGGCTGCTCTTCAAACGGCTGACCAGGCCACCCTGAGCTaGCAGTTCTTCCAAACTCCAAATCCTACTCTAACAACTGCCACG +
Preference number: 1 (lower is better)
Translates to: EHMAALQTADQATLS*QFFQTPNPTLTTAT
Trigger: CGTGGCAGTTGTTAGAGTAGGATTTGGAGTTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAGCCGTTTGAAGAGCAGCCATGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 90 bp AATCCATGTGCCTCCCTTTTGCTAGCTTTCTCTAGGACGCTCAGCTaGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCAC +
Preference number: 1 (lower is better)
Translates to: NPCASLLLAFSRTLS*TSMPQGELSREMLH
Trigger: GTGAAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCTAGAGAAAGCTAGCAAAAGGGAGGCACATGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR TCA 90 bp GAGAAAATGAGACTGAGAAGAACACATGGCTGCTCTTCAAACGGCTaGCCAGGCCACCCTGAGCTGCCAGTTCTTCCAAACTCCAAATCC +
Preference number: 1 (lower is better)
Translates to: EKMRLRRTHGCSSNG*PGHPELPVLPNSKS
Trigger: GGATTTGGAGTTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAGCCGTTTGAAGAGCAGCCATGTGTTCTTCTCAGTCTCATTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR GCA 90 bp GACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGAACTaGATGGATGGAAGCTATCTCAGCATGCAGGTGAGGGAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: DCWFPFELLIQILGN*MDGSYLSMQVREEE
Trigger: CTCTTCCTCCCTCACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR GCA 90 bp CCTGAGCTGCCAGTTCTTCCAAACTCCAAATCCTACTCTAACAACTaGCACGGACCTTCCTACCACTTCATCCTAGCTAAACCTATGGCT +
Preference number: 1 (lower is better)
Translates to: PELPVLPNSKSYSNN*HGPSYHFILAKPMA
Trigger: AGCCATAGGTTTAGCTAGGATGAAGTGGTAGGAAGGTCCGTGGCAGTTGTTAGAGTAGGATTTGGAGTTTGGAAGAACTGGCAGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 90 bp GCTACTCCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTaGAGTCCAACTGCTCTACCTGGAGTTATTTGTACAGAGAATCTG +
Preference number: 1 (lower is better)
Translates to: ATPSRTLCLTYTKVT*SPTALPGVICTENL
Trigger: CAGATTCTCTGTACAAATAACTCCAGGTAGAGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGGAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 90 bp AAGGACACAGTAAGATGGGTCCGTATTGGAGAGGAAGCAAAGGGATaGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTCA +
Preference number: 1 (lower is better)
Translates to: KDTVRWVRIGEEAKG*FSSSPSASHKVGIS
Trigger: TGAAATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTCCTCTCCAATACGGACCCATCTTACTGTGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR TCA 90 bp TGGATACAGCAGGTTGGTAGGAAATTTCGGTTGGATACTATTACCTaGCTACGGCGAGAATCATTACAATGCACTCATGTACTATTATTA +
Preference number: 1 (lower is better)
Translates to: WIQQVGRKFRLDTIT*LRRESLQCTHVLLL
Trigger: TAATAATAGTACATGAGTGCATTGTAATGATTCTCGCCGTAGTCAGGTAATAGTATCCAACCGAAATTTCCTACCAACCTGCTGTATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCAGGCGAGTTGGGTCTaGGTCATTTACCACGCGTGC +
Preference number: 2 (lower is better)
Translates to: GSWTTILASPPAPAGRSLQASWV*VIYHAC
Trigger: GCACGCGTGGTAAATGACCCAGACCCAACTCGCCTG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCAGGCCACCCTGAGCTaGCAGTTCTTCCAAACTCCA +
Preference number: 2 (lower is better)
Translates to: GSWTTILASPPAPAGRSLQATLS*QFFQTP
Trigger: TGGAGTTTGGAAGAACTGGCAGCTCAGGGTGGCCTG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGTCAGCTGGACCAGTATaGCTCAGGGAGAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: GSWTTILASPPAPAGRSLSAGPV*LRENSA
Trigger: GGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGA...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCGTCCACAGGCGAGTTaGGTCTGGGTCATTTACCAC +
Preference number: 2 (lower is better)
Translates to: GSWTTILASPPAPAGRSLRPQAS*VWVIYH
Trigger: GTGGTAAATGACCCAGACCCAACTCGCCTGTGGACG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGACCCTCCAGGCGTCTTaGAATGTCACCAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: GSWTTILASPPAPAGRSLTLQAS*NVTRSS
Trigger: GCTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGT...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCAGGTGAGCAGGGCTaGGAAGGACTGAATGGCCCC +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPAGEQG*EGLNGP
Trigger: GGGGCCATTCAGTCCTTCCCAGCCCTGCTCACCTGC...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCATGAGACTTCGCTaGATCCGCCCAGCCACACAC +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKPMRLR*IRPATH
Trigger: GTGTGTGGCTGGGCGGATTCAGCGAAGTCTCATGGG...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTGCTCTTCAAACGGCTaGCCAGGCCACCCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKCSSNG*PGHPEL
Trigger: CAGCTCAGGGTGGCCTGGTCAGCCGTTTGAAGAGCA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCACAGGCGAGTTGGGTCTaGGTCATTTACCACGCGTGC +
Preference number: 2 (lower is better)
Translates to: LEVKAGSWTTILASPPAPQASWV*VIYHAC
Trigger: GCACGCGTGGTAAATGACCCAGACCCAACTCGCCTG...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTAGGTCCTGCTTCCCATaGGACTTCGCTGAATCCGCC +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPRSCFP*DFAESA
Trigger: GGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGAACCTTGCCCATGCTaGTGTCTTGACTGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: LEVKAGSWTTILASPPAPEPCPC*CLDCQA
Trigger: AGCCTGGCAGTCAAGACATCAGCATGGGCAAGGTTC...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCCTGACCAGGCCACCCTaGGCTGCCAGTTCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTLTRPP*AASSSK
Trigger: TTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAG...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCAGAAGCAGCAGTTTaGAAACAGAACCTTGCCCAT +
Preference number: 2 (lower is better)
Translates to: GSWTTILASPPAPAGRSLPEAAV*KQNLAH
Trigger: ATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGACTGAGAAGAACACATaGCTGCTCTTCAAACGGCTG +
Preference number: 2 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALTEKNT*LLFKRL
Trigger: CAGCCGTTTGAAGAGCAGCCATGTGTTCTTCTCAGT...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGGGGAGAACTCAGCCGTaGGATGCTTCACCTAAGGGA +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKGRTQP*DASPKG
Trigger: TCCCTTAGGTGAAGCATCTCACGGCTGAGTTCTCCC...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGGGAGAACTCAGCCGTaGGATGCTTCACCTAAGGGA +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPGRTQP*DASPKG
Trigger: TCCCTTAGGTGAAGCATCTCACGGCTGAGTTCTCCC...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPLVTVP*CLTLRA
Trigger: AGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAG...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: WPADLEVKAGSWTTILASLVTVP*CLTLRA
Trigger: AGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAG...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCCAGGCCACCCTGAGCTaGCAGTTCTTCCAAACTCCA +
Preference number: 2 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTQATLS*QFFQTP
Trigger: TGGAGTTTGGAAGAACTGGCAGCTCAGGGTGGCCTG...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCGTCCACAGGCGAGTTaGGTCTGGGTCATTTACCAC +
Preference number: 2 (lower is better)
Translates to: WPADLEVKAGSWTTILASRPQAS*VWVIYH
Trigger: GTGGTAAATGACCCAGACCCAACTCGCCTGTGGACG...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCAAGGACACAGTAAGATaGGTCCGTATTGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCKDTVR*VRIGEE
Trigger: TTCCTCTCCAATACGGACCCATCTTACTGTGTCCTT...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCTAGGACGCTCAGCTaGACCAGTATGCCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTSRTLS*TSMPQG
Trigger: TCCCTGAGGCATACTGGTCCAGCTGAGCGTCCTAGA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCACTGTGAAATCCATGTaGCTCCCTTTTGCTAGCTTT +
Preference number: 2 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCTVKSM*LPFASF
Trigger: AAAGCTAGCAAAAGGGAGGCACATGGATTTCACAGT...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCTGGGAAGGACTGAATaGCCCCTTCTGAAGATACCG +
Preference number: 2 (lower is better)
Translates to: WPADLEVKAGSWTTILASLGRTE*PLLKIP
Trigger: CGGTATCTTCAGAAGGGGCCATTCAGTCCTTCCCAG...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCTGGGAAGGACTGAATaGCCCCTTCTGAAGATACCG +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPLGRTE*PLLKIP
Trigger: CGGTATCTTCAGAAGGGGCCATTCAGTCCTTCCCAG...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTGTGAGAAATGTAAGATaGGAGAGAGGGAGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: RTLSWTSMPQGELSREMLVRNVR*ERGRAS
Trigger: GGAGGCTCTCCCTCTCTCTCATCTTACATTTCTCAC...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTGCTCTTCAAACGGCTaGCCAGGCCACCCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVCSSNG*PGHPEL
Trigger: CAGCTCAGGGTGGCCTGGTCAGCCGTTTGAAGAGCA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAAAAGATTTTGAGATCTaGCTGCCCCTCGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: LEVKAGSWTTILASPPAPKDFEI*LPLVQN
Trigger: GTTCTGCACGAGGGGCAGTCAGATCTCAAAATCTTT...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATGGAATTTCAGGAATTaGTGGCTACTCCCTCACGGA +
Preference number: 2 (lower is better)
Translates to: LEVKAGSWTTILASPPAPWNFRN*WLLPHG
Trigger: TCCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTCCTACTCTAACAACTaGCACGGACCTTCCTACCAC +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKSYSNN*HGPSYH
Trigger: GTGGTAGGAAGGTCCGTGGCAGTTGTTAGAGTAGGA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTATTTTGAGATCTGACTaGCCCTCGTGCAGAACAGGG +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPILRSD*PSCRTG
Trigger: CCCTGTTCTGCACGAGGGGCAGTCAGATCTCAAAAT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAAAGGGAGTAGGTGACTaGTGGTTCCCCTTTGAACTT +
Preference number: 2 (lower is better)
Translates to: LEVKAGSWTTILASPPAPKGVGD*WFPFEL
Trigger: AAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGAAATTTGAATGGGAGTaGACCAAGAAAAGGAGACTG +
Preference number: 2 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALKFEWE*TKKRRL
Trigger: CAGTCTCCTTTTCTTGGTCCACTCCCATTCAAATTT...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGGGAGATCGCTGCCCTaGTATTTTAGGTCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPGRSLP*YFRSGL
Trigger: TAACCCTGACCTAAAATACCAGGGCAGCGATCTCCC...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGAGGTCCTGCTTCCCATaGGACTTCGCTGAATCCGCC +
Preference number: 2 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVRSCFP*DFAESA
Trigger: GGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCT...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGCTGACCAGGCCACCCTaGGCTGCCAGTTCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: KGVGDCWFPFELLIQILGLTRPP*AASSSK
Trigger: TTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAG...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCTGCTGGTTCCCCTTTaGACTTCTAATCCAGATCCT +
Preference number: 2 (lower is better)
Translates to: RTLSWTSMPQGELSREMLLLVPL*TSNPDP
Trigger: AGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCCAGATCCTTGGGAACTaGATGGATGGAAGCTATCTC +
Preference number: 2 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTQILGN*MDGSYL
Trigger: GAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTG...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTAAGGGAGTAGGTGACTaGTGGTTCCCCTTTGAACTT +
Preference number: 2 (lower is better)
Translates to: RTLSWTSMPQGELSREMLKGVGD*WFPFEL
Trigger: AAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGCAGGCGAGTTGGGTCTaGGTCATTTACCACGCGTGC +
Preference number: 2 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVQASWV*VIYHAC
Trigger: GCACGCGTGGTAAATGACCCAGACCCAACTCGCCTG...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCCAGAAGCAGCAGTTTaGAAACAGAACCTTGCCCAT +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPPEAAV*KQNLAH
Trigger: ATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGG...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCACTGAGAAGAACACATaGCTGCTCTTCAAACGGCTG +
Preference number: 2 (lower is better)
Translates to: WPADLEVKAGSWTTILASTEKNT*LLFKRL
Trigger: CAGCCGTTTGAAGAGCAGCCATGTGTTCTTCTCAGT...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTAAGATGGGTCCGTATTaGAGAGGAAGCAAAGGGATG +
Preference number: 2 (lower is better)
Translates to: RTLSWTSMPQGELSREMLKMGPY*RGSKGM
Trigger: CATCCCTTTGCTTCCTCTCCAATACGGACCCATCTT...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTGTGTTTACTCACATTaGCCCCAGAGAGGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKCVYSH*PQRGKD
Trigger: GTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCTGGGAACTGCATGGATaGAAGCTATCTCAGCATGCA +
Preference number: 2 (lower is better)
Translates to: WPADLEVKAGSWTTILASWELHG*KLSQHA
Trigger: TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCA...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATCTAATCCAGATCCTTaGGAACTGCATGGATGGAAG +
Preference number: 2 (lower is better)
Translates to: LEVKAGSWTTILASPPAPSNPDP*ELHGWK
Trigger: CTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGGGAGTAGGTGACTGCTaGTTCCCCTTTGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKGVGDC*FPFELL
Trigger: TAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCC...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCGGAGTAGGTGACTGCTaGTTCCCCTTTGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTGVGDC*FPFELL
Trigger: TAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCC...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CAA 90 bp CCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTaGACTGCCAGGCTGAGAGCTCACATTAGCCCAGCCTGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: PEAAVWKQNLAHADV*TARLRAHISPACSV
Trigger: AACAGAACAGGCTGGGCTAATGTGAGCTCTCAGCCTGGCAGTCAAGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTCTGACCAGGCCACCCTaGGCTGCCAGTTCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGLTRPP*AASSSK
Trigger: TTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAG...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGACCCTCCAGGCGTCTTaGAATGTCACCAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: KGVGDCWFPFELLIQILGTLQAS*NVTRSS
Trigger: GCTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGT...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTACCCTCCAGGCGTCTTaGAATGTCACCAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTATLQAS*NVTRSS
Trigger: GCTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGT...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTGCAGGTGAGCAGGGCTaGGAAGGACTGAATGGCCCC +
Preference number: 2 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIAGEQG*EGLNGP
Trigger: GGGGCCATTCAGTCCTTCCCAGCCCTGCTCACCTGC...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCTAATCCAGATCCTTaGGAACTGCATGGATGGAAG +
Preference number: 2 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTSNPDP*ELHGWK
Trigger: CTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTGCATCTCTTCTTTCTaGTTCTCCCTAAGACAGTTG +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKCISSF*FSLRQL
Trigger: CAACTGTCTTAGGGAGAATCAGAAAGAAGAGATGCA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTACTGTGAAATCCATGTaGCTCCCTTTTGCTAGCTTT +
Preference number: 2 (lower is better)
Translates to: ADLEVKAGSWTTILASPPTVKSM*LPFASF
Trigger: AAAGCTAGCAAAAGGGAGGCACATGGATTTCACAGT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCGTGAGAAATGTAAGATaGGAGAGAGGGAGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVVRNVR*ERGRAS
Trigger: GGAGGCTCTCCCTCTCTCTCATCTTACATTTCTCAC...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAAAATTAGCTCAAATTTaGATGGGAGTGGACCAAGAA +
Preference number: 2 (lower is better)
Translates to: LEVKAGSWTTILASPPAPKLAQI*MGVDQE
Trigger: TTCTTGGTCCACTCCCATTCAAATTTGAGCTAATTT...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTTCCTACTCTAACAACTaGCACGGACCTTCCTACCAC +
Preference number: 2 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTASYSNN*HGPSYH
Trigger: GTGGTAGGAAGGTCCGTGGCAGTTGTTAGAGTAGGA...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTAAATTTGAATGGGAGTaGACCAAGAAAAGGAGACTG +
Preference number: 2 (lower is better)
Translates to: RTLSWTSMPQGELSREMLKFEWE*TKKRRL
Trigger: CAGTCTCCTTTTCTTGGTCCACTCCCATTCAAATTT...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTCCAACTGCTCTACCTaGAGTTATTTGTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKSNCST*SYLYRE
Trigger: TTCTCTGTACAAATAACTCCAGGTAGAGCAGTTGGA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTGAGAAATGTAAGATaGGAGAGAGGGAGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGVRNVR*ERGRAS
Trigger: GGAGGCTCTCCCTCTCTCTCATCTTACATTTCTCAC...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGGAACCTTGCCCATGCTaGTGTCTTGACTGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKEPCPC*CLDCQA
Trigger: AGCCTGGCAGTCAAGACATCAGCATGGGCAAGGTTC...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTGAACCTTGCCCATGCTaGTGTCTTGACTGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIEPCPC*CLDCQA
Trigger: AGCCTGGCAGTCAAGACATCAGCATGGGCAAGGTTC...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGAAAGATTTTGAGATCTaGCTGCCCCTCGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: KGVGDCWFPFELLIQILGKDFEI*LPLVQN
Trigger: GTTCTGCACGAGGGGCAGTCAGATCTCAAAATCTTT...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGGGGAGAACTCAGCCGTaGGATGCTTCACCTAAGGGA +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKGRTQP*DASPKG
Trigger: TCCCTTAGGTGAAGCATCTCACGGCTGAGTTCTCCC...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTCTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: EAKGWFSSSPSASHKVGILVTVP*CLTLRA
Trigger: AGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAG...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGCCAGAAGCAGCAGTTTaGAAACAGAACCTTGCCCAT +
Preference number: 2 (lower is better)
Translates to: KGVGDCWFPFELLIQILGPEAAV*KQNLAH
Trigger: ATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGG...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTACTGAGAAGAACACATaGCTGCTCTTCAAACGGCTG +
Preference number: 2 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTATEKNT*LLFKRL
Trigger: CAGCCGTTTGAAGAGCAGCCATGTGTTCTTCTCAGT...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCACTGGGAAGGACTGAATaGCCCCTTCTGAAGATACCG +
Preference number: 2 (lower is better)
Translates to: TSNPDPWELHGWKLSQHALGRTE*PLLKIP
Trigger: CGGTATCTTCAGAAGGGGCCATTCAGTCCTTCCCAG...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTGTGTTTACTCACATTaGCCCCAGAGAGGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVCVYSH*PQRGKD
Trigger: GTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTCTAGGACGCTCAGCTaGACCAGTATGCCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKSRTLS*TSMPQG
Trigger: TCCCTGAGGCATACTGGTCCAGCTGAGCGTCCTAGA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCCCATGAGACTTCGCTaGATCCGCCCAGCCACACAC +
Preference number: 2 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVPMRLR*IRPATH
Trigger: GTGTGTGGCTGGGCGGATTCAGCGAAGTCTCATGGG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTATACTAAGGTGACCTaGAGTCCAACTGCTCTACCT +
Preference number: 2 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVYTKVT*SPTALP
Trigger: AGGTAGAGCAGTTGGACTCCAGGTCACCTTAGTATA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGAAGGACACAGTAAGATaGGTCCGTATTGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVKDTVR*VRIGEE
Trigger: TTCCTCTCCAATACGGACCCATCTTACTGTGTCCTT...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGAGGTCCTGCTTCCCATaGGACTTCGCTGAATCCGCC +
Preference number: 2 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVRSCFP*DFAESA
Trigger: GGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCT...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGATTTTGAGATCTGACTaGCCCTCGTGCAGAACAGGG +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKILRSD*PSCRTG
Trigger: CCCTGTTCTGCACGAGGGGCAGTCAGATCTCAAAAT...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTAAGGACACAGTAAGATaGGTCCGTATTGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGKDTVR*VRIGEE
Trigger: TTCCTCTCCAATACGGACCCATCTTACTGTGTCCTT...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGAAAGATTTTGAGATCTaGCTGCCCCTCGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKKDFEI*LPLVQN
Trigger: GTTCTGCACGAGGGGCAGTCAGATCTCAAAATCTTT...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTCTGAATGGCCCCTTCTaGAGATACCGCTTATTTATT +
Preference number: 2 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGLNGPF*RYRLFI
Trigger: AATAAATAAGCGGTATCTTCAGAAGGGGCCATTCAG...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTGGAATTTCAGGAATTaGTGGCTACTCCCTCACGGA +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKWNFRN*WLLPHG
Trigger: TCCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR GCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCAGATCCTTGGGAACTaGATGGATGGAAGCTATCTC +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKQILGN*MDGSYL
Trigger: GAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTAAATTAGCTCAAATTTaGATGGGAGTGGACCAAGAA +
Preference number: 2 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTAKLAQI*MGVDQE
Trigger: TTCTTGGTCCACTCCCATTCAAATTTGAGCTAATTT...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCACTGAATGGCCCCTTCTaGAGATACCGCTTATTTATT +
Preference number: 2 (lower is better)
Translates to: TSNPDPWELHGWKLSQHALNGPF*RYRLFI
Trigger: AATAAATAAGCGGTATCTTCAGAAGGGGCCATTCAG...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTATACTAAGGTGACCTaGAGTCCAACTGCTCTACCT +
Preference number: 2 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIYTKVT*SPTALP
Trigger: AGGTAGAGCAGTTGGACTCCAGGTCACCTTAGTATA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCTGAATGGCCCCTTCTaGAGATACCGCTTATTTATT +
Preference number: 2 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKLNGPF*RYRLFI
Trigger: AATAAATAAGCGGTATCTTCAGAAGGGGCCATTCAG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTCCAACTGCTCTACCTaGAGTTATTTGTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: EAKGWFSSSPSASHKVGISNCST*SYLYRE
Trigger: TTCTCTGTACAAATAACTCCAGGTAGAGCAGTTGGA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGAAGATGGGTCCGTATTaGAGAGGAAGCAAAGGGATG +
Preference number: 2 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVKMGPY*RGSKGM
Trigger: CATCCCTTTGCTTCCTCTCCAATACGGACCCATCTT...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGTATACTAAGGTGACCTaGAGTCCAACTGCTCTACCT +
Preference number: 2 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVYTKVT*SPTALP
Trigger: AGGTAGAGCAGTTGGACTCCAGGTCACCTTAGTATA...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CAA 90 bp ATCAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTaGGTAGGAAATTTCGGTTGGATACTATTACCTGACTACGGCGAG +
Preference number: 2 (lower is better)
Translates to: INNFYNFLQNFGYSR*VGNFGWILLPDYGE
Trigger: CTCGCCGTAGTCAGGTAATAGTATCCAACCGAAATTTCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCGTCCACAGGCGAGTaGGGTCTGGGTCATTTACCA +
Preference number: 3 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCPSTGE*GLGHLP
Trigger: TGGTAAATGACCCAGACCCAACTCGCCTGTGGACGG...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR GCA 72 bp GGTCATTTACCACGCGTGCGGCTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCTGTGCCCGGCTCTAGG +
Preference number: 3 (lower is better)
Translates to: GHLPRVRLVTVP*CLTLRAVPGSR
Trigger: CCTAGAGCCGGGCACAGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAGCCGCACGCGTGGTAAATGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCCGTCCACAGGCGAGTaGGGTCTGGGTCATTTACCA +
Preference number: 3 (lower is better)
Translates to: RTLSWTSMPQGELSREMLPSTGE*GLGHLP
Trigger: TGGTAAATGACCCAGACCCAACTCGCCTGTGGACGG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 72 bp GCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTaGTATTTTAGGTCAGGGTTAGGTAGACCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: ASPPAPAGRSLP*YFRSGLGRPQR
Trigger: TCTCTGGGGTCTACCTAACCCTGACCTAAAATACCAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 72 bp TTGTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTaGACGACCATCTTGGCAAGCCCACCTGCACCAGCT +
Preference number: 3 (lower is better)
Translates to: LWPADLEVKAGS*TTILASPPAPA
Trigger: AGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR TCA 72 bp CCACACACCATCCAGAGTAGGGTGAGAAATGTAAGATaGGAGAGAGGGAGAGCCTCCCCGTCCACAGGCGAG +
Preference number: 3 (lower is better)
Translates to: PHTIQSRVRNVR*ERGRASPSTGE
Trigger: CTCGCCTGTGGACGGGGAGGCTCTCCCTCTCTCTCATCTTACATTTCTCACCCTACTCTGGATGGTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR TCA 72 bp CAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTaGGATGCTTCACCTAAGGGAGTAGGTGACTGCTGG +
Preference number: 3 (lower is better)
Translates to: QLDQYASGRTQP*DASPKGVGDCW
Trigger: CCAGCAGTCACCTACTCCCTTAGGTGAAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 72 bp GCCTCCCTTTTGCTAGCTTTCTCTAGGACGCTCAGCTaGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAG +
Preference number: 3 (lower is better)
Translates to: ASLLLAFSRTLS*TSMPQGELSRE
Trigger: CTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCTAGAGAAAGCTAGCAAAAGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR TCA 72 bp CAAGAAAAGGAGACTGCAGGGGTGTGTCCTACTTCCTaGCTCCCACCCTCCAGGCGTCTTGGAATGTCACCA +
Preference number: 3 (lower is better)
Translates to: QEKETAGVCPTS*LPPSRRLGMSP
Trigger: TGGTGACATTCCAAGACGCCTGGAGGGTGGGAGTCAGGAAGTAGGACACACCCCTGCAGTCTCCTTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGGAAATTAGCTCAAATTaGAATGGGAGTGGACCAAGA +
Preference number: 3 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALEISSN*NGSGPR
Trigger: TCTTGGTCCACTCCCATTCAAATTTGAGCTAATTTC...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGTTCTCCCTAAGACAGTaGTTGAACCAATTCATACTG +
Preference number: 3 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALFSLRQ*LNQFIL
Trigger: CAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAA...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTTGGAATTTCAGGAATaGATGGCTACTCCCTCACGG +
Preference number: 3 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTLEFQE*MATPSR
Trigger: CCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCAA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTTTGGAATTTCAGGAATaGATGGCTACTCCCTCACGG +
Preference number: 3 (lower is better)
Translates to: RTLSWTSMPQGELSREMLLEFQE*MATPSR
Trigger: CCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCAA...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR GCA 72 bp GCTGCTCTTCAAACGGCTGACCAGGCCACCCTGAGCTaGCAGTTCTTCCAAACTCCAAATCCTACTCTAACA +
Preference number: 3 (lower is better)
Translates to: AALQTADQATLS*QFFQTPNPTLT
Trigger: TGTTAGAGTAGGATTTGGAGTTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAGCCGTTTGAAGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATCTACCTGGAGTTATTaGTACAGAGAATCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: LEVKAGSWTTILASPPAPSTWSY*YRESAG
Trigger: ACCTGCAGATTCTCTGTACAAATAACTCCAGGTAGA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCACACCCTCCAGGCGTCTaGGAATGTCACCAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAHPPGV*ECHQKQ
Trigger: CTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGTG...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGAAATTAGCTCAAATTaGAATGGGAGTGGACCAAGA +
Preference number: 3 (lower is better)
Translates to: LEVKAGSWTTILASPPAPEISSN*NGSGPR
Trigger: TCTTGGTCCACTCCCATTCAAATTTGAGCTAATTTC...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTCCGTCCACAGGCGAGTaGGGTCTGGGTCATTTACCA +
Preference number: 3 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIPSTGE*GLGHLP
Trigger: TGGTAAATGACCCAGACCCAACTCGCCTGTGGACGG...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCACCCTCCAGGCGTCTaGGAATGTCACCAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKHPPGV*ECHQKQ
Trigger: CTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGTG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTTCTCCCTAAGACAGTaGTTGAACCAATTCATACTG +
Preference number: 3 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKFSLRQ*LNQFIL
Trigger: CAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 72 bp TCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATaGGTCCGTATTGGAGAGGAAGCAAAGGGATGGTTT +
Preference number: 3 (lower is better)
Translates to: SHWPQRGKDTVR*VRIGEEAKGWF
Trigger: AAACCATCCCTTTGCTTCCTCTCCAATACGGACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR GCA 72 bp TTCCCCTTTGAACTTCTAATCCAGATCCTTGGGAACTaGATGGATGGAAGCTATCTCAGCATGCAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: FPFELLIQILGN*MDGSYLSMQVR
Trigger: CCTCACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGTTCAAAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTCTACCTGGAGTTATTaGTACAGAGAATCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVSTWSY*YRESAG
Trigger: ACCTGCAGATTCTCTGTACAAATAACTCCAGGTAGA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR-3UTR CAA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCCATGTGCCTCCCTTTaGCTAGCTTTCTCTAGGACG +
Preference number: 3 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVPCASL*LAFSRT
Trigger: CGTCCTAGAGAAAGCTAGCAAAAGGGAGGCACATGG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CCA 72 bp TCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTaGAGTCCAACTGCTCTACCTGGAGTTATTTGTACA +
Preference number: 3 (lower is better)
Translates to: SRTLCLTYTKVT*SPTALPGVICT
Trigger: TGTACAAATAACTCCAGGTAGAGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR TCA 72 bp CAGGTTGGTAGGAAATTTCGGTTGGATACTATTACCTaGCTACGGCGAGAATCATTACAATGCACTCATGTA +
Preference number: 3 (lower is better)
Translates to: QVGRKFRLDTIT*LRRESLQCTHV
Trigger: TACATGAGTGCATTGTAATGATTCTCGCCGTAGTCAGGTAATAGTATCCAACCGAAATTTCCTACCAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCGCAAATGGTGGAGGTaGCCTCGGCGCAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLRKWWR*PRRRSG
Trigger: CCCGCTCCTGCGCCGAGGGCACCTCCACCATTTGCG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCCAGCGAGGACCCTGGTaGCACCGAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSQRGPW*HRAGGR
Trigger: TCGGCCTCCTGCTCGGTGGCACCAGGGTCCTCGCTG...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCTTGGGGACCAGGCCTaGGATGGAGCCGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLLGDQA*DGAAEQ
Trigger: CTGCTCTGCGGCTCCATCCCAGGCCTGGTCCCCAAG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCACAGCCGCAAATGGTaGAGGTGCCCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLHSRKW*RCPRRR
Trigger: CCTGCGCCGAGGGCACCTCCACCATTTGCGGCTGTG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCACAGCCGCAAATGGTaGAGGTGCCCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALHSRKW*RCPRRR
Trigger: CCTGCGCCGAGGGCACCTCCACCATTTGCGGCTGTG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGTCCGTCCTCGTGTTGTaGCCCCGGCCACAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALSVLVL*PRPQQS
Trigger: GCTCTGCTGTGGCCGGGGCCACAACACGAGGACGGA...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCGATGCCGTGGGAGGTaGCATTGCAAGTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALRCRGR*HCKSGP
Trigger: GGGACCGGACTTGCAATGTCACCTCCCACGGCATCG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCGATGCCGTGGGAGGTaGCATTGCAAGTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLRCRGR*HCKSGP
Trigger: GGGACCGGACTTGCAATGTCACCTCCCACGGCATCG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGGCACGGAAGTCAGGCTaGGCCCACCAGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALARKSG*AHQQVF
Trigger: GAAGACCTGCTGGTGGGCGCAGCCTGACTTCCGTGC...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGGCACGGAAGTCAGGCTaGGCCCACCAGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLARKSG*AHQQVF
Trigger: GAAGACCTGCTGGTGGGCGCAGCCTGACTTCCGTGC...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCGGCCACGCTGGGCATaGTCTCGATGTAATTGCGGC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALRPRWA*SRCNCG
Trigger: GCCGCAATTACATCGAGATCATGCCCAGCGTGGCCG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCTCTCCGTGGGTGGCTTaGAGAGCGAGTACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCSPWVA*RASTWP
Trigger: GGGCCAAGTACTCGCTCTTCAAGCCACCCACGGAGA...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGTTCCCAGCGCCCTGGTaGCCTACTTGCAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLFPAPW*PTCRCA
Trigger: TGCACACCTGCAAGTAGGGCACCAGGGCGCTGGGAA...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCCTGGACGACCATCTTaGCAAGCCCACCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALPGRPS*QAHLHQ
Trigger: CTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCGTGAAGGCGGGCTCCTaGACGACCATCTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCVKAGS*TTILAS
Trigger: GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCAC...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCCCCATGAGACTTCGCTaGATCCGCCCAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSPMRLR*IRPATH
Trigger: GTGTGTGGCTGGGCGGATTCAGCGAAGTCTCATGGG...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGAGGTCCTGCTTCCCATaGGACTTCGCTGAATCCGCC +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLRSCFP*DFAESA
Trigger: GGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCT...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGAGGTCCTGCTTCCCATaGGACTTCGCTGAATCCGCC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALRSCFP*DFAESA
Trigger: GGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCT...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCTGACCAGGCCACCCTaGGCTGCCAGTTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLLTRPP*AASSSK
Trigger: TTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCAGCGAGGACCCTGGTaGCACCGAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLQRGPW*HRAGGR
Trigger: TCGGCCTCCTGCTCGGTGGCACCAGGGTCCTCGCTG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCAGAGATGTGTACTGCTaGCCCAGGGCCAGGGACCAC +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSRDVYC*PRARDH
Trigger: GTGGTCCCTGGCCCTGGGCCAGCAGTACACATCTCT...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCACTTGGGGACCAGGCCTaGGATGGAGCCGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPLGDQA*DGAAEQ
Trigger: CTGCTCTGCGGCTCCATCCCAGGCCTGGTCCCCAAG...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTAGGCCGACTCGCGGGTaGCTTTGTCGAGGACGGGCC +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPRPTRG*LCRGRA
Trigger: GGCCCGTCCTCGACAAAGCCACCCGCGAGTCGGCCT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCAGGCCGACTCGCGGGTaGCTTTGTCGAGGACGGGCC +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASRPTRG*LCRGRA
Trigger: GGCCCGTCCTCGACAAAGCCACCCGCGAGTCGGCCT...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCAGGCGAGTTGGGTCTaGGTCATTTACCACGCGTGC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALQASWV*VIYHAC
Trigger: GCACGCGTGGTAAATGACCCAGACCCAACTCGCCTG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGGGGAGAACTCAGCCGTaGGATGCTTCACCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLGRTQP*DASPKG
Trigger: TCCCTTAGGTGAAGCATCTCACGGCTGAGTTCTCCC...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCCAGGGACCACCAAATTaGGTAGCCAGCGAGGACCCT +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSQGPPN*VASEDP
Trigger: AGGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTG...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCACAGCCGCAAATGGTaGAGGTGCCCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLHSRKW*RCPRRR
Trigger: CCTGCGCCGAGGGCACCTCCACCATTTGCGGCTGTG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAAGTCACAGCCGCAAATaGTGGAGGTGCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPSHSRK*WRCPRR
Trigger: GCGCCGAGGGCACCTCCACCATTTGCGGCTGTGACT...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCATCCGCGAACTCCCTaGACACTAACACGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCHPRTP*TLTRRS
Trigger: ACTTCGGCGTGTTAGTGTCCAGGGAGTTCGCGGATG...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATGTTGTGCTTGTTCATaGCCGAGCGCGCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPCCACS*PSARPA
Trigger: GGCCGGACGCGCGCTCGGCCATGAACAAGCACAACA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCAACCCGTCTCTGGGTTaGGCTCACAAAAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCNPSLG*AHKSWG
Trigger: CCCCCAACTTTTGTGAGCCCAACCCAGAGACGGGTT...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCAGCCATCGATGCCGTaGGAGGTGACATTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALQPSMP*EVTLQV
Trigger: GACTTGCAATGTCACCTCCCACGGCATCGATGGCTG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCAGGCGGCCCCTTATaGTGCGAGTCACAGCCGCAA +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASPGGPL*CESQPQ
Trigger: TTGCGGCTGTGACTCGCATCATAAGGGGCCGCCTGG...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCCAGAGATGTGTACTaGTGGCCCAGGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASPRDVY*WPRARD
Trigger: GTCCCTGGCCCTGGGCCAGCAGTACACATCTCTGGG...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATGTCATCTATGGTGGTaGAGTTCCAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPCHLWW*SSSGGP
Trigger: GGGGCCGCCGCTGGAACTGCACCACCATAGATGACA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCCAGGCCACCCTGAGCTaGCAGTTCTTCCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSQATLS*QFFQTP
Trigger: TGGAGTTTGGAAGAACTGGCAGCTCAGGGTGGCCTG...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCTCAGCTGGACCAGTATaGCTCAGGGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSSAGPV*LRENSA
Trigger: GGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGA...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCCATCCGCGAACTCCCTaGACACTAACACGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSHPRTP*TLTRRS
Trigger: ACTTCGGCGTGTTAGTGTCCAGGGAGTTCGCGGATG...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCTGGGAAGGACTGAATaGCCCCTTCTGAAGATACCG +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLLGRTE*PLLKIP
Trigger: CGGTATCTTCAGAAGGGGCCATTCAGTCCTTCCCAG...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGGCAGGTGAGCAGGGCTaGGAAGGACTGAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKAGEQG*EGLNGP
Trigger: GGGGCCATTCAGTCCTTCCCAGCCCTGCTCACCTGC...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCTCTAGGACGCTCAGCTaGACCAGTATGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSSRTLS*TSMPQG
Trigger: TCCCTGAGGCATACTGGTCCAGCTGAGCGTCCTAGA...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CAA 72 bp GATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTaGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTG +
Preference number: 4 (lower is better)
Translates to: DLEVKAGSWTTI*ASPPAPAGRSL
Trigger: CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCAGAGCAGGGGCTGTaGGCCCAGAGATGTGTACTG +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPAEQGL*AQRCVL
Trigger: CAGTACACATCTCTGGGCTCACAGCCCCTGCTCTGC...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCGGCCACGCTGGGCATaGTCTCGATGTAATTGCGGC +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKRPRWA*SRCNCG
Trigger: GCCGCAATTACATCGAGATCATGCCCAGCGTGGCCG...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCTCTCCGTGGGTGGCTTaGAGAGCGAGTACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASSPWVA*RASTWP
Trigger: GGGCCAAGTACTCGCTCTTCAAGCCACCCACGGAGA...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCTCCGTGGGTGGCTTaGAGAGCGAGTACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTSPWVA*RASTWP
Trigger: GGGCCAAGTACTCGCTCTTCAAGCCACCCACGGAGA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGGTGAGAAATGTAAGATaGGAGAGAGGGAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALVRNVR*ERGRAS
Trigger: GGAGGCTCTCCCTCTCTCTCATCTTACATTTCTCAC...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCTCTTCAAACGGCTaGCCAGGCCACCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTCSSNG*PGHPEL
Trigger: CAGCTCAGGGTGGCCTGGTCAGCCGTTTGAAGAGCA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTTTCCCAGCGCCCTGGTaGCCTACTTGCAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPFPAPW*PTCRCA
Trigger: TGCACACCTGCAAGTAGGGCACCAGGGCGCTGGGAA...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGTCCTACTCTAACAACTaGCACGGACCTTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLSYSNN*HGPSYH
Trigger: GTGGTAGGAAGGTCCGTGGCAGTTGTTAGAGTAGGA...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGATTTTGAGATCTGACTaGCCCTCGTGCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLILRSD*PSCRTG
Trigger: CCCTGTTCTGCACGAGGGGCAGTCAGATCTCAAAAT...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTAGCAGCCCGAGCAGGTaGGGCTCCATTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPSSPSR*GSIRRG
Trigger: GCCTCTTCTAATGGAGCCCCACCTGCTCGGGCTGCT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGAGAGATGTGTACTGCTaGCCCAGGGCCAGGGACCAC +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKRDVYC*PRARDH
Trigger: GTGGTCCCTGGCCCTGGGCCAGCAGTACACATCTCT...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCCTGGGAAGGACTGAATaGCCCCTTCTGAAGATACCG +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSLGRTE*PLLKIP
Trigger: CGGTATCTTCAGAAGGGGCCATTCAGTCCTTCCCAG...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCCCTGGACGACCATCTTaGCAAGCCCACCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTPGRPS*QAHLHQ
Trigger: CTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGG...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGGTTTGCCCGCGACCATaGAGAGGGGGAGCGACGCCC +
Preference number: 4 (lower is better)
Translates to: KGVGDCWFPFELLIQILGVCPRP*RGGATP
Trigger: GGGCGTCGCTCCCCCTCTTCATGGTCGCGGGCAAAC...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGGTTTGCCCGCGACCATaGAGAGGGGGAGCGACGCCC +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVVCPRP*RGGATP
Trigger: GGGCGTCGCTCCCCCTCTTCATGGTCGCGGGCAAAC...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGCAGCGAGGACCCTGGTaGCACCGAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVQRGPW*HRAGGR
Trigger: TCGGCCTCCTGCTCGGTGGCACCAGGGTCCTCGCTG...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGCGCAAATGGTGGAGGTaGCCTCGGCGCAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVRKWWR*PRRRSG
Trigger: CCCGCTCCTGCGCCGAGGGCACCTCCACCATTTGCG...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCAGCACCAGTGGAAGATaGAGTGGCATTTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCSTSGR*SGIFPS
Trigger: GGAAGGAAAAATGCCACTGCATCTTCCACTGGTGCT...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGAAGGGAGTAGGTGACTaGTGGTTCCCCTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLKGVGD*WFPFEL
Trigger: AAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATCAGCTGGACCAGTATaGCTCAGGGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPSAGPV*LRENSA
Trigger: GGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGGACGCCCCCAATAGTTaGAACAAAGTCCACTTGAGA +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALDAPNS*NKVHLR
Trigger: TCTCAAGTGGACTTTGTTCCAACTATTGGGGGCGTC...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCCAGGGACCACCAAATTaGGTAGCCAGCGAGGACCCT +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTQGPPN*VASEDP
Trigger: AGGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTG...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCGGACGGGCCCAAAGATaGCCAGGCTGTCATCTATGG +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTGRAQR*PGCHLW
Trigger: CCATAGATGACAGCCTGGCCATCTTTGGGCCCGTCC...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTGGACGGGCCCAAAGATaGCCAGGCTGTCATCTATGG +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLGRAQR*PGCHLW
Trigger: CCATAGATGACAGCCTGGCCATCTTTGGGCCCGTCC...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCCGCCGGCCGAGGCGATaGCGTGAACGAAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVRRPRR*RERRPT
Trigger: AGTCGGCCTTCGTTCACGCCATCGCCTCGGCCGGCG...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCAGGCGAGTTGGGTCTaGGTCATTTACCACGCGTGC +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASQASWV*VIYHAC
Trigger: GCACGCGTGGTAAATGACCCAGACCCAACTCGCCTG...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCACGTCCACAGGCGAGTTaGGTCTGGGTCATTTACCAC +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPRPQAS*VWVIYH
Trigger: GTGGTAAATGACCCAGACCCAACTCGCCTGTGGACG...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCCAGAAGCAGCAGTTTaGAAACAGAACCTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALPEAAV*KQNLAH
Trigger: ATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGTGTGTTTACTCACATTaGCCCCAGAGAGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLCVYSH*PQRGKD
Trigger: GTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACA...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGTCCTTGGGAACTGCATaGATGGAAGCTATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLSLGTA*MEAISA
Trigger: TGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGA...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCGGAGTAGGTGACTGCTaGTTCCCCTTTGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCGVGDC*FPFELL
Trigger: TAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCC...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATCTAGGACGCTCAGCTaGACCAGTATGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPSRTLS*TSMPQG
Trigger: TCCCTGAGGCATACTGGTCCAGCTGAGCGTCCTAGA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTTTGCCCGCGACCATaGAGAGGGGGAGCGACGCCC +
Preference number: 4 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGVCPRP*RGGATP
Trigger: GGGCGTCGCTCCCCCTCTTCATGGTCGCGGGCAAAC...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTGAACCTTGCCCATGCTaGTGTCTTGACTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLEPCPC*CLDCQA
Trigger: AGCCTGGCAGTCAAGACATCAGCATGGGCAAGGTTC...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCGAACCTTGCCCATGCTaGTGTCTTGACTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTEPCPC*CLDCQA
Trigger: AGCCTGGCAGTCAAGACATCAGCATGGGCAAGGTTC...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCAAAGATTTTGAGATCTaGCTGCCCCTCGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSKDFEI*LPLVQN
Trigger: GTTCTGCACGAGGGGCAGTCAGATCTCAAAATCTTT...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCTCGGGACTCACGGTaGTTCTCTACTACCATCTCC +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKPRDSR*FSTTIS
Trigger: GGAGATGGTAGTAGAGAAGCACCGTGAGTCCCGAGG...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLLVTVP*CLTLRA
Trigger: AGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCACAGCTGGGAGATCGCTaGCCTGGTATTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPQLGDR*PGILGQ
Trigger: CTGACCTAAAATACCAGGGCAGCGATCTCCCAGCTG...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTCTTGGGGACCAGGCCTaGGATGGAGCCGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTALGDQA*DGAAEQ
Trigger: CTGCTCTGCGGCTCCATCCCAGGCCTGGTCCCCAAG...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCAACCCGTCTCTGGGTTaGGCTCACAAAAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTNPSLG*AHKSWG
Trigger: CCCCCAACTTTTGTGAGCCCAACCCAGAGACGGGTT...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCAACCCGTCTCTGGGTTaGGCTCACAAAAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASNPSLG*AHKSWG
Trigger: CCCCCAACTTTTGTGAGCCCAACCCAGAGACGGGTT...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTCCGTCCTCGTGTTGTaGCCCCGGCCACAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVSVLVL*PRPQQS
Trigger: GCTCTGCTGTGGCCGGGGCCACAACACGAGGACGGA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCACCCTCCAGGCGTCTTaGAATGTCACCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASTLQAS*NVTRSS
Trigger: GCTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGT...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCTATACTAAGGTGACCTaGAGTCCAACTGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCYTKVT*SPTALP
Trigger: AGGTAGAGCAGTTGGACTCCAGGTCACCTTAGTATA...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGTGCATCTCTTCTTTCTaGTTCTCCCTAAGACAGTTG +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALCISSF*FSLRQL
Trigger: CAACTGTCTTAGGGAGAATCAGAAAGAAGAGATGCA...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGACTGTGAAATCCATGTaGCTCCCTTTTGCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALTVKSM*LPFASF
Trigger: AAAGCTAGCAAAAGGGAGGCACATGGATTTCACAGT...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCAGCTGGGAGATCGCTaGCCTGGTATTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLQLGDR*PGILGQ
Trigger: CTGACCTAAAATACCAGGGCAGCGATCTCCCAGCTG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCAGCTGGGAGATCGCTaGCCTGGTATTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPQLGDR*PGILGQ
Trigger: CTGACCTAAAATACCAGGGCAGCGATCTCCCAGCTG...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCCATTTGAGGTGCATGTaGTCCAGGATAGTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTHLRCM*SRIVVR
Trigger: CCGCACGACTATCCTGGACCACATGCACCTCAAATG...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTCCCTTCCCAGCGCCCTaGTGCCCTACTTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTAPFPAP*CPTCRC
Trigger: ACACCTGCAAGTAGGGCACCAGGGCGCTGGGAAGGG...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGCCCTTCCCAGCGCCCTaGTGCCCTACTTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVPFPAP*CPTCRC
Trigger: ACACCTGCAAGTAGGGCACCAGGGCGCTGGGAAGGG...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGCCCACCTGCACCAGCTaGGAGATCGCTGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVPTCTS*EIAALV
Trigger: TACCAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGG...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCACAGTCTAAGGTGAGATaGGGAGGGGCATTTCAGACT +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPQSKVR*GGAFQT
Trigger: AGTCTGAAATGCCCCTCCCCATCTCACCTTAGACTG...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCGTGAGAAATGTAAGATaGGAGAGAGGGAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTVRNVR*ERGRAS
Trigger: GGAGGCTCTCCCTCTCTCTCATCTTACATTTCTCAC...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCCTGAATGGCCCCTTCTaGAGATACCGCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSLNGPF*RYRLFI
Trigger: AATAAATAAGCGGTATCTTCAGAAGGGGCCATTCAG...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCTGCATCTCTTCTTTCTaGTTCTCCCTAAGACAGTTG +
Preference number: 4 (lower is better)
Translates to: LCPALGPASHETSLNPPSCISSF*FSLRQL
Trigger: CAACTGTCTTAGGGAGAATCAGAAAGAAGAGATGCA...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCATTTTGAGATCTGACTaGCCCTCGTGCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: WPADLEVKAGSWTTILASILRSD*PSCRTG
Trigger: CCCTGTTCTGCACGAGGGGCAGTCAGATCTCAAAAT...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCAGCAGCCCGAGCAGGTaGGGCTCCATTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVSSPSR*GSIRRG
Trigger: GCCTCTTCTAATGGAGCCCCACCTGCTCGGGCTGCT...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTAGCCAGCGAGGACCCTaGTGCCACCGAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGISQRGP*CHRAGG
Trigger: GCCTCCTGCTCGGTGGCACCAGGGTCCTCGCTGGCT...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGAGGCCGACTCGCGGGTaGCTTTGTCGAGGACGGGCC +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKRPTRG*LCRGRA
Trigger: GGCCCGTCCTCGACAAAGCCACCCGCGAGTCGGCCT...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCGCCGGCCGAGGCGATaGCGTGAACGAAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKRRPRR*RERRPT
Trigger: AGTCGGCCTTCGTTCACGCCATCGCCTCGGCCGGCG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTCGCCGGCCGAGGCGATaGCGTGAACGAAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIRRPRR*RERRPT
Trigger: AGTCGGCCTTCGTTCACGCCATCGCCTCGGCCGGCG...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTAGTCACAGCCGCAAATaGTGGAGGTGCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGSHSRK*WRCPRR
Trigger: GCGCCGAGGGCACCTCCACCATTTGCGGCTGTGACT...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCATCCGTCCTCGTGTTGTaGCCCCGGCCACAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHASVLVL*PRPQQS
Trigger: GCTCTGCTGTGGCCGGGGCCACAACACGAGGACGGA...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGAAATTTGAATGGGAGTaGACCAAGAAAAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GSWTTILASPPAPAGRSLKFEWE*TKKRRL
Trigger: CAGTCTCCTTTTCTTGGTCCACTCCCATTCAAATTT...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCAAATTTGAATGGGAGTaGACCAAGAAAAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCKFEWE*TKKRRL
Trigger: CAGTCTCCTTTTCTTGGTCCACTCCCATTCAAATTT...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCTCCAACTGCTCTACCTaGAGTTATTTGTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCSNCST*SYLYRE
Trigger: TTCTCTGTACAAATAACTCCAGGTAGAGCAGTTGGA...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATGTGTTTACTCACATTaGCCCCAGAGAGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPCVYSH*PQRGKD
Trigger: GTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATGGGAACTGCATGGATaGAAGCTATCTCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPWELHG*KLSQHA
Trigger: TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGGGGAGATCGCTGCCCTaGTATTTTAGGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKGRSLP*YFRSGL
Trigger: TAACCCTGACCTAAAATACCAGGGCAGCGATCTCCC...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTCCCACCTGCACCAGCTaGGAGATCGCTGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSPTCTS*EIAALV
Trigger: TACCAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGG...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCCCTGGACGACCATCTTaGCAAGCCCACCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVPGRPS*QAHLHQ
Trigger: CTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGG...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CAA 72 bp GCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTaGACTGCCAGGCTGAGAGCTCACATTAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVWKQNLAHADV*TARLRAHISPA
Trigger: GGCTGGGCTAATGTGAGCTCTCAGCCTGGCAGTCAAGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTAGGTCCTGCTTCCCATaGGACTTCGCTGAATCCGCC +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTARSCFP*DFAESA
Trigger: GGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCT...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCCTGACCAGGCCACCCTaGGCTGCCAGTTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVLTRPP*AASSSK
Trigger: TTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAG...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTAAAGATTTTGAGATCTaGCTGCCCCTCGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPKDFEI*LPLVQN
Trigger: GTTCTGCACGAGGGGCAGTCAGATCTCAAAATCTTT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTTGGAATTTCAGGAATTaGTGGCTACTCCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPWNFRN*WLLPHG
Trigger: TCCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCA...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCTGCTGGTTCCCCTTTaGACTTCTAATCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKLLVPL*TSNPDP
Trigger: AGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAG...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCCTGCTGGTTCCCCTTTaGACTTCTAATCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTLLVPL*TSNPDP
Trigger: AGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAG...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCACCCAGAGATGTGTACTaGTGGCCCAGGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAPRDVY*WPRARD
Trigger: GTCCCTGGCCCTGGGCCAGCAGTACACATCTCTGGG...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCAAGGGAGTAGGTGACTaGTGGTTCCCCTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTKGVGD*WFPFEL
Trigger: AAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGAAGGGAGTAGGTGACTaGTGGTTCCCCTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKKGVGD*WFPFEL
Trigger: AAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTCTTGGCAAGCCCACCTaGACCAGCTGGGAGATCGCT +
Preference number: 4 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGLGKPT*TSWEIA
Trigger: AGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAG...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTCTTGGCAAGCCCACCTaGACCAGCTGGGAGATCGCT +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSLGKPT*TSWEIA
Trigger: AGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAG...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCGACGCCCCCAATAGTTaGAACAAAGTCCACTTGAGA +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTDAPNS*NKVHLR
Trigger: TCTCAAGTGGACTTTGTTCCAACTATTGGGGGCGTC...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTGGACGGGCCCAAAGATaGCCAGGCTGTCATCTATGG +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTAGRAQR*PGCHLW
Trigger: CCATAGATGACAGCCTGGCCATCTTTGGGCCCGTCC...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCATGTTGTGCTTGTTCATaGCCGAGCGCGCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHACCACS*PSARPA
Trigger: GGCCGGACGCGCGCTCGGCCATGAACAAGCACAACA...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTAAAGGAACCCGTCTCTaGGTTGGGCTCACAAAAGTT +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPKGTRL*VGLTKV
Trigger: AACTTTTGTGAGCCCAACCCAGAGACGGGTTCCTTT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGGGAACTGCATGGATaGAAGCTATCTCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTWELHG*KLSQHA
Trigger: TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTTCCTTGGGAACTGCATaGATGGAAGCTATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLSLGTA*MEAISA
Trigger: TGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGA...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGGAGTAGGTGACTGCTaGTTCCCCTTTGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPGVGDC*FPFELL
Trigger: TAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCC...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCTTTTTACAAAACTTTaGATACAGCAGGTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCLFTKL*IQQVGR
Trigger: CCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAG...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGCTTTTTACAAAACTTTaGATACAGCAGGTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALLFTKL*IQQVGR
Trigger: CCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAG...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTCGATGCCGTGGGAGGTaGCATTGCAAGTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIRCRGR*HCKSGP
Trigger: GGGACCGGACTTGCAATGTCACCTCCCACGGCATCG...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGGGGAGAACTCAGCCGTaGGATGCTTCACCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVGRTQP*DASPKG
Trigger: TCCCTTAGGTGAAGCATCTCACGGCTGAGTTCTCCC...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCGGGAGAACTCAGCCGTaGGATGCTTCACCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVGRTQP*DASPKG
Trigger: TCCCTTAGGTGAAGCATCTCACGGCTGAGTTCTCCC...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTACTTGTCAGCTACTTaGATACGCCCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKYLSAT*IRPRNM
Trigger: CATGTTTCTGGGGCGTATTCAAGTAGCTGACAAGTA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTGCACGGAAGTCAGGCTaGGCCCACCAGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIARKSG*AHQQVF
Trigger: GAAGACCTGCTGGTGGGCGCAGCCTGACTTCCGTGC...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTCCTCGGGACTCACGGTaGTTCTCTACTACCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTAPRDSR*FSTTIS
Trigger: GGAGATGGTAGTAGAGAAGCACCGTGAGTCCCGAGG...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCAAGTCCGGTCCCTTGTaGCAAAGGAACCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVKSGPL*QRNPSL
Trigger: CAGAGACGGGTTCCTTTGGCACAAGGGACCGGACTT...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTAAGTCCGGTCCCTTGTaGCAAAGGAACCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTAKSGPL*QRNPSL
Trigger: CAGAGACGGGTTCCTTTGGCACAAGGGACCGGACTT...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCATTCCCAGCGCCCTGGTaGCCTACTTGCAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAFPAPW*PTCRCA
Trigger: TGCACACCTGCAAGTAGGGCACCAGGGCGCTGGGAA...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGCTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KGVGDCWFPFELLIQILGLVTVP*CLTLRA
Trigger: AGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAG...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAACTGTGAAATCCATGTaGCTCCCTTTTGCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPTVKSM*LPFASF
Trigger: AAAGCTAGCAAAAGGGAGGCACATGGATTTCACAGT...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCCATCCGCGAACTCCCTaGACACTAACACGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVHPRTP*TLTRRS
Trigger: ACTTCGGCGTGTTAGTGTCCAGGGAGTTCGCGGATG...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTGTTGTGCTTGTTCATaGCCGAGCGCGCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKCCACS*PSARPA
Trigger: GGCCGGACGCGCGCTCGGCCATGAACAAGCACAACA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCCAGCCATCGATGCCGTaGGAGGTGACATTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVQPSMP*EVTLQV
Trigger: GACTTGCAATGTCACCTCCCACGGCATCGATGGCTG...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTCAGGCGAGTTGGGTCTaGGTCATTTACCACGCGTGC +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSQASWV*VIYHAC
Trigger: GCACGCGTGGTAAATGACCCAGACCCAACTCGCCTG...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTCGTCCACAGGCGAGTTaGGTCTGGGTCATTTACCAC +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTARPQAS*VWVIYH
Trigger: GTGGTAAATGACCCAGACCCAACTCGCCTGTGGACG...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTTATACTAAGGTGACCTaGAGTCCAACTGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLYTKVT*SPTALP
Trigger: AGGTAGAGCAGTTGGACTCCAGGTCACCTTAGTATA...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTAAGGACACAGTAAGATaGGTCCGTATTGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPKDTVR*VRIGEE
Trigger: TTCCTCTCCAATACGGACCCATCTTACTGTGTCCTT...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTAAGGACACAGTAAGATaGGTCCGTATTGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLKDTVR*VRIGEE
Trigger: TTCCTCTCCAATACGGACCCATCTTACTGTGTCCTT...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCTCTAGGACGCTCAGCTaGACCAGTATGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVSRTLS*TSMPQG
Trigger: TCCCTGAGGCATACTGGTCCAGCTGAGCGTCCTAGA...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTCCCACCTGCACCAGCTaGGAGATCGCTGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIPTCTS*EIAALV
Trigger: TACCAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGG...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGTGAAGGCGGGCTCCTaGACGACCATCTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAVKAGS*TTILAS
Trigger: GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCAC...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCCCATGAGACTTCGCTaGATCCGCCCAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKPMRLR*IRPATH
Trigger: GTGTGTGGCTGGGCGGATTCAGCGAAGTCTCATGGG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCACTGACCAGGCCACCCTaGGCTGCCAGTTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHALTRPP*AASSSK
Trigger: TTTGGAAGAACTGGCAGCTCAGGGTGGCCTGGTCAG...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCTGAATGGCCCCTTCTaGAGATACCGCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: RTLSWTSMPQGELSREMLLNGPF*RYRLFI
Trigger: AATAAATAAGCGGTATCTTCAGAAGGGGCCATTCAG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTTGCATCTCTTCTTTCTaGTTCTCCCTAAGACAGTTG +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPCISSF*FSLRQL
Trigger: CAACTGTCTTAGGGAGAATCAGAAAGAAGAGATGCA...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATTGGATACTATTACCTaGCTACGGCGAGAATCATTA +
Preference number: 4 (lower is better)
Translates to: LEVKAGSWTTILASPPAPLDTIT*LRRESL
Trigger: TAATGATTCTCGCCGTAGTCAGGTAATAGTATCCAA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTGTCATCTATGGTGGTaGAGTTCCAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGICHLWW*SSSGGP
Trigger: GGGGCCGCCGCTGGAACTGCACCACCATAGATGACA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCGCAAATGGTGGAGGTaGCCTCGGCGCAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVRKWWR*PRRRSG
Trigger: CCCGCTCCTGCGCCGAGGGCACCTCCACCATTTGCG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTTCAGCTGGACCAGTATaGCTCAGGGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSSAGPV*LRENSA
Trigger: GGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGA...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCTTGGCAAGCCCACCTaGACCAGCTGGGAGATCGCT +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKLGKPT*TSWEIA
Trigger: AGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCCATTTGAGGTGCATGTaGTCCAGGATAGTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVHLRCM*SRIVVR
Trigger: CCGCACGACTATCCTGGACCACATGCACCTCAAATG...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTCAGCCATCGATGCCGTaGGAGGTGACATTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGQPSMP*EVTLQV
Trigger: GACTTGCAATGTCACCTCCCACGGCATCGATGGCTG...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTGTGAAGGCGGGCTCCTaGACGACCATCTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIVKAGS*TTILAS
Trigger: GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCAC...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTTGGATACTATTACCTaGCTACGGCGAGAATCATTA +
Preference number: 4 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTLDTIT*LRRESL
Trigger: TAATGATTCTCGCCGTAGTCAGGTAATAGTATCCAA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCACTGGTGACAGTTCCTTaGTGTCTGACGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHALVTVP*CLTLRA
Trigger: AGCCCTCAGCGTCAGACAGCAAGGAACTGTCACCAG...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTCCTACTCTAACAACTaGCACGGACCTTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVSYSNN*HGPSYH
Trigger: GTGGTAGGAAGGTCCGTGGCAGTTGTTAGAGTAGGA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGATTTTGAGATCTGACTaGCCCTCGTGCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: KGVGDCWFPFELLIQILGILRSD*PSCRTG
Trigger: CCCTGTTCTGCACGAGGGGCAGTCAGATCTCAAAAT...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCAGGGACCACCAAATTaGGTAGCCAGCGAGGACCCT +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKQGPPN*VASEDP
Trigger: AGGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTCATTTGAGGTGCATGTaGTCCAGGATAGTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSHLRCM*SRIVVR
Trigger: CCGCACGACTATCCTGGACCACATGCACCTCAAATG...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTTCCAACTGCTCTACCTaGAGTTATTTGTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: ADLEVKAGSWTTILASPPSNCST*SYLYRE
Trigger: TTCTCTGTACAAATAACTCCAGGTAGAGCAGTTGGA...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGCAGTCTAAGGTGAGATaGGGAGGGGCATTTCAGACT +
Preference number: 4 (lower is better)
Translates to: KGVGDCWFPFELLIQILGQSKVR*GGAFQT
Trigger: AGTCTGAAATGCCCCTCCCCATCTCACCTTAGACTG...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCCAGGCGGCCCCTTATaGTGCGAGTCACAGCCGCAA +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVPGGPL*CESQPQ
Trigger: TTGCGGCTGTGACTCGCATCATAAGGGGCCGCCTGG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTGTGAGAAATGTAAGATaGGAGAGAGGGAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSVRNVR*ERGRAS
Trigger: GGAGGCTCTCCCTCTCTCTCATCTTACATTTCTCAC...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGAAAGATTTTGAGATCTaGCTGCCCCTCGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVKDFEI*LPLVQN
Trigger: GTTCTGCACGAGGGGCAGTCAGATCTCAAAATCTTT...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTGGAATTTCAGGAATTaGTGGCTACTCCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVWNFRN*WLLPHG
Trigger: TCCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTCACTTGCATTTGAGGTaGATGTGGTCCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTAHLHLR*MWSRIV
Trigger: GACTATCCTGGACCACATGCACCTCAAATGCAAGTG...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGAGTCACAGCCGCAAATaGTGGAGGTGCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVSHSRK*WRCPRR
Trigger: GCGCCGAGGGCACCTCCACCATTTGCGGCTGTGACT...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGAAAGGAACCCGTCTCTaGGTTGGGCTCACAAAAGTT +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVKGTRL*VGLTKV
Trigger: AACTTTTGTGAGCCCAACCCAGAGACGGGTTCCTTT...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCAAAGGAACCCGTCTCTaGGTTGGGCTCACAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVKGTRL*VGLTKV
Trigger: AACTTTTGTGAGCCCAACCCAGAGACGGGTTCCTTT...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCCCTTCCCAGCGCCCTaGTGCCCTACTTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVPFPAP*CPTCRC
Trigger: ACACCTGCAAGTAGGGCACCAGGGCGCTGGGAAGGG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGAAGATGGGTCCGTATTaGAGAGGAAGCAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVKMGPY*RGSKGM
Trigger: CATCCCTTTGCTTCCTCTCCAATACGGACCCATCTT...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGTGTGTTTACTCACATTaGCCCCAGAGAGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: KGVGDCWFPFELLIQILGCVYSH*PQRGKD
Trigger: GTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACA...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGGCAGAGCAGGGGCTGTaGGCCCAGAGATGTGTACTG +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVAEQGL*AQRCVL
Trigger: CAGTACACATCTCTGGGCTCACAGCCCCTGCTCTGC...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGTGCTCTTCAAACGGCTaGCCAGGCCACCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVCSSNG*PGHPEL
Trigger: CAGCTCAGGGTGGCCTGGTCAGCCGTTTGAAGAGCA...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTACTTGTCAGCTACTTaGATACGCCCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVYLSAT*IRPRNM
Trigger: CATGTTTCTGGGGCGTATTCAAGTAGCTGACAAGTA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGTGTCATCTATGGTGGTaGAGTTCCAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVCHLWW*SSSGGP
Trigger: GGGGCCGCCGCTGGAACTGCACCACCATAGATGACA...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTCACTTGCATTTGAGGTaGATGTGGTCCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSHLHLR*MWSRIV
Trigger: GACTATCCTGGACCACATGCACCTCAAATGCAAGTG...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGAGAGATGTGTACTGCTaGCCCAGGGCCAGGGACCAC +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVRDVYC*PRARDH
Trigger: GTGGTCCCTGGCCCTGGGCCAGCAGTACACATCTCT...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTCCAGAAGCAGCAGTTTaGAAACAGAACCTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGPEAAV*KQNLAH
Trigger: ATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGG...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCAAGGACACAGTAAGATaGGTCCGTATTGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVKDTVR*VRIGEE
Trigger: TTCCTCTCCAATACGGACCCATCTTACTGTGTCCTT...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAAGCACCAGTGGAAGATaGAGTGGCATTTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHASTSGR*SGIFPS
Trigger: GGAAGGAAAAATGCCACTGCATCTTCCACTGGTGCT...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTCCTACTCTAACAACTaGCACGGACCTTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGISYSNN*HGPSYH
Trigger: GTGGTAGGAAGGTCCGTGGCAGTTGTTAGAGTAGGA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAAAGATGGGTCCGTATTaGAGAGGAAGCAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAKMGPY*RGSKGM
Trigger: CATCCCTTTGCTTCCTCTCCAATACGGACCCATCTT...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTTCTAATCCAGATCCTTaGGAACTGCATGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGSNPDP*ELHGWK
Trigger: CTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTCTGAATGGCCCCTTCTaGAGATACCGCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSLNGPF*RYRLFI
Trigger: AATAAATAAGCGGTATCTTCAGAAGGGGCCATTCAG...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGAAGTCCGGTCCCTTGTaGCAAAGGAACCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVKSGPL*QRNPSL
Trigger: CAGAGACGGGTTCCTTTGGCACAAGGGACCGGACTT...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCTCCAACTGCTCTACCTaGAGTTATTTGTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVSNCST*SYLYRE
Trigger: TTCTCTGTACAAATAACTCCAGGTAGAGCAGTTGGA...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTGGGAACTGCATGGATaGAAGCTATCTCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIWELHG*KLSQHA
Trigger: TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTCCTTGGGAACTGCATaGATGGAAGCTATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGISLGTA*MEAISA
Trigger: TGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTACTTGTCAGCTACTTaGATACGCCCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKYLSAT*IRPRNM
Trigger: CATGTTTCTGGGGCGTATTCAAGTAGCTGACAAGTA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCATTGGATACTATTACCTaGCTACGGCGAGAATCATTA +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHALDTIT*LRRESL
Trigger: TAATGATTCTCGCCGTAGTCAGGTAATAGTATCCAA...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGGAAAAATCTTTGTTCTaGTCATTCCCCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKEKSLF*SFPCCI
Trigger: GATGCAGCAGGGGAATGAGCAGAACAAAGATTTTTC...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCAGTCTAAGGTGAGATaGGGAGGGGCATTTCAGACT +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVQSKVR*GGAFQT
Trigger: AGTCTGAAATGCCCCTCCCCATCTCACCTTAGACTG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTAGGAAATTTCGGTTaGATACTATTACCTGACTAC +
Preference number: 4 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGVGNFG*ILLPDY
Trigger: GTAGTCAGGTAATAGTATCCAACCGAAATTTCCTAC...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTGTAGGAAATTTCGGTTaGATACTATTACCTGACTAC +
Preference number: 4 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSVGNFG*ILLPDY
Trigger: GTAGTCAGGTAATAGTATCCAACCGAAATTTCCTAC...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCACTTGCATTTGAGGTaGATGTGGTCCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVHLHLR*MWSRIV
Trigger: GACTATCCTGGACCACATGCACCTCAAATGCAAGTG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCAGATCCTTGGGAACTaGATGGATGGAAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVQILGN*MDGSYL
Trigger: GAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGACTGAGAAGAACACATaGCTGCTCTTCAAACGGCTG +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVTEKNT*LLFKRL
Trigger: CAGCCGTTTGAAGAGCAGCCATGTGTTCTTCTCAGT...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGTAGGAAATTTCGGTTaGATACTATTACCTGACTAC +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAVGNFG*ILLPDY
Trigger: GTAGTCAGGTAATAGTATCCAACCGAAATTTCCTAC...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCACTTTTTACAAAACTTTaGATACAGCAGGTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TSNPDPWELHGWKLSQHALFTKL*IQQVGR
Trigger: CCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAG...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGAAATTAGCTCAAATTTaGATGGGAGTGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKKLAQI*MGVDQE
Trigger: TTCTTGGTCCACTCCCATTCAAATTTGAGCTAATTT...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR TCA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTAAATTAGCTCAAATTTaGATGGGAGTGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIKLAQI*MGVDQE
Trigger: TTCTTGGTCCACTCCCATTCAAATTTGAGCTAATTT...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGTCTAATCCAGATCCTTaGGAACTGCATGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVSNPDP*ELHGWK
Trigger: CTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR GCA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGGAAAAATCTTTGTTCTaGTCATTCCCCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVEKSLF*SFPCCI
Trigger: GATGCAGCAGGGGAATGAGCAGAACAAAGATTTTTC...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
3UTR CAA 72 bp TTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTaGGTAGGAAATTTCGGTTGGATACTATTACCTGAC +
Preference number: 4 (lower is better)
Translates to: FYNFLQNFGYSR*VGNFGWILLPD
Trigger: GTCAGGTAATAGTATCCAACCGAAATTTCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 90 bp GGCCCAGGGCCAGGGACCACCAAATTGGGTAGCCAGCGAGGACCCTaGTGCCACCGAGCAGGAGGCCGAGGAGCAGCCCGAGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GPGPGTTKLGSQRGP*CHRAGGRGAARAGG
Trigger: CCCACCTGCTCGGGCTGCTCCTCGGCCTCCTGCTCGGTGGCACCAGGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTGGCCCTGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 90 bp CCGAGCGCGCGTCCGGCCTGTTCTCGCGCGCATCCGCGAACTCCCTaGACACTAACACGCCGAAGTCAGCGTCCTCGCTGCAGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: PSARPACSRAHPRTP*TLTRRSQRPRCSRP
Trigger: GGGGCGGCTGCAGCGAGGACGCTGACTTCGGCGTGTTAGTGTCCAGGGAGTTCGCGGATGCGCGCGAGAACAGGCCGGACGCGCGCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS TCA 90 bp AGTCACAGCCGCAAATGGTGGAGGTGCCCTCGGCGCAGGAGCGGGTaGCGGCGAAGGCCACGCCGGCCGAGGCGATGGCGTGAACGAAGG +
Preference number: 5 (lower is better)
Translates to: SHSRKWWRCPRRRSG*RRRPRRPRRWRERR
Trigger: CCTTCGTTCACGCCATCGCCTCGGCCGGCGTGGCCTTCGCCGTCACCCGCTCCTGCGCCGAGGGCACCTCCACCATTTGCGGCTGTGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCCCTGTCCTGGACGACCATCTaGGCAAGCCCACCTGCACCA +
Preference number: 5 (lower is better)
Translates to: LDDHLGKPTCTSWEIAALSWTTI*ASPPAP
Trigger: TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGA...CAGGGCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGCGAACCCGTCTCTGGGTaGGGCTCACAAAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: APGRPSWQAHLHQLGDRCEPVSG*GSQKLG
Trigger: CCCCAACTTTTGTGAGCCCAACCCAGAGACGGGTTC...GCAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS GCA 90 bp GAACAGGCCCCTTTAGGCTGTGCCTTGGCACTTGGGGACTGTCCCTaGAGCGCAGTGACTGCTGTGTCCCTGAAGAGTCCACCACACAGC +
Preference number: 5 (lower is better)
Translates to: EQAPLGCALALGDCP*SAVTAVSLKSPPHS
Trigger: GCTGTGTGGTGGACTCTTCAGGGACACAGCAGTCACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576471.1
ENST00000631815.1
CDS CCA 90 bp GATGCCATGGTGGGAACAGGCCCCTTTAGGCTGTGCCTTGGCACTTaGGGACTGTCCCTGCAGCGCAGTGACTGCTGTGTCCCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: DAMVGTGPFRLCLGT*GLSLQRSDCCVPEE
Trigger: CTCTTCAGGGACACAGCAGTCACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576471.1
ENST00000631815.1
CDS-3UTR CAA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCACCAGGGACCACCAAATaGGGTAGCCAGCGAGGACCC +
Preference number: 5 (lower is better)
Translates to: LEVKAGSWTTILASPPAPPGTTK*GSQRGP
Trigger: GGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTGG...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGGACTCGCGGGTGGCTTaGTCGAGGACGGGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKDSRVA*SRTGPK
Trigger: CTTTGGGCCCGTCCTCGACAAAGCCACCCGCGAGTC...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGTGCGGCCCGCCTCGTaGTTGTGCTTGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: LEVKAGSWTTILASPPAPVRPAS*LCLFMA
Trigger: GGCCATGAACAAGCACAACAACGAGGCGGGCCGCAC...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCGAACCCGTCTCTGGGTaGGGCTCACAAAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LCPALGPASHETSLNPPSEPVSG*GSQKLG
Trigger: CCCCAACTTTTGTGAGCCCAACCCAGAGACGGGTTC...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS GCA 90 bp GTTCTTGTCACGGATGCCATGGTGGGAACAGGCCCCTTTAGGCTGTaGCTTGGCACTTGGGGACTGTCCCTGCAGCGCAGTGACTGCTGT +
Preference number: 5 (lower is better)
Translates to: VLVTDAMVGTGPFRL*LGTWGLSLQRSDCC
Trigger: ACAGCAGTCACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATCCGTGACAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572508.1
ENST00000576471.1
ENST00000631815.1
ENST00000633989.1
CDS-3UTR CAA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCGCCGAGGAGGAAGTTaGCCCGCGACCATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKRRGGS*PATMKR
Trigger: CCTCTTCATGGTCGCGGGCAAACTTCCTCCTCGGCG...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCGCCGAGGAGGAAGTTaGCCCGCGACCATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RTLSWTSMPQGELSREMLRRGGS*PATMKR
Trigger: CCTCTTCATGGTCGCGGGCAAACTTCCTCCTCGGCG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCAGGGACCACCAAATaGGGTAGCCAGCGAGGACCC +
Preference number: 5 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKPGTTK*GSQRGP
Trigger: GGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTGG...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGTGCGGCCCGCCTCGTaGTTGTGCTTGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: ADLEVKAGSWTTILASPPVRPAS*LCLFMA
Trigger: GGCCATGAACAAGCACAACAACGAGGCGGGCCGCAC...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCACTCTCCGTGGGTGGCTaGAAGAGCGAGTACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LEVKAGSWTTILASPPAPLSVGG*KSEYLA
Trigger: GGCCAAGTACTCGCTCTTCAAGCCACCCACGGAGAG...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS TCA 90 bp GGCTCCATTAGAAGAGGCGCCGAGGAGGAAGTTTGCCCGCGACCATaGAGAGGGGGAGCGACGCCCCCAATAGTTGGAACAAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: GSIRRGAEEEVCPRP*RGGATPPIVGTKST
Trigger: AGTGGACTTTGTTCCAACTATTGGGGGCGTCGCTCCCCCTCTTCATGGTCGCGGGCAAACTTCCTCCTCGGCGCCTCTTCTAATGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS GCA 90 bp AGGCTGTGCCTTGGCACTTGGGGACTGTCCCTGCAGCGCAGTGACTaGTGTGTCCCTGAAGAGTCCACCACACAGCCAGGAAAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: RLCLGTWGLSLQRSD*CVPEESTTQPGKSK
Trigger: TTTGCTCTTTCCTGGCTGTGTGGTGGACTCTTCAGGGACACAGCAGTCACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAGGCACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576471.1
ENST00000631815.1
CDS CCA 90 bp CCCAGAAACCTGCATTCTGGCTCCTGGTTCTTGTCACGGATGCCATaGTGGGAACAGGCCCCTTTAGGCTGTGCCTTGGCACTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: PRNLHSGSWFLSRMP*WEQAPLGCALALGD
Trigger: GTCCCCAAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATCCGTGACAAGAACCAGGAGCCAGAATGCAGGTTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS CCA 90 bp CAGGGCACTCAGAAGGGAGCTGACAAGTCCCAGAAACCTGCATTCTaGCTCCTGGTTCTTGTCACGGATGCCATGGTGGGAACAGGCCCC +
Preference number: 5 (lower is better)
Translates to: QGTQKGADKSQKPAF*LLVLVTDAMVGTGP
Trigger: GGGGCCTGTTCCCACCATGGCATCCGTGACAAGAACCAGGAGCCAGAATGCAGGTTTCTGGGACTTGTCAGCTCCCTTCTGAGTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS-3UTR CAA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCTTGAAGAGCGAGTACTaGGCCCGGAGGGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: WPADLEVKAGSWTTILASLKSEY*ARRVST
Trigger: GGTGGAGACCCTCCGGGCCAAGTACTCGCTCTTCAA...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTCTCTCCGTGGGTGGCTaGAAGAGCGAGTACTTGGCC +
Preference number: 5 (lower is better)
Translates to: RTLSWTSMPQGELSREMLLSVGG*KSEYLA
Trigger: GGCCAAGTACTCGCTCTTCAAGCCACCCACGGAGAG...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCCGTGGGAGGTGACATaGCAAGTCCGGTCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: ADLEVKAGSWTTILASPPPWEVT*QVRSLV
Trigger: CACAAGGGACCGGACTTGCAATGTCACCTCCCACGG...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTTCCTGGACGACCATCTaGGCAAGCCCACCTGCACCA +
Preference number: 5 (lower is better)
Translates to: RTLSWTSMPQGELSREMLSWTTI*ASPPAP
Trigger: TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGA...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 90 bp GACGCAGGTCATGTGCATCAGGCAGGAAACAAGTGGGTTGAAGGGTaGAATCTAGGAGCTGGCCATGTGCGCGTTGGAGGGAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: DAGHVHQAGNKWVEG*NLGAGHVRVGGRGG
Trigger: TCCACCTCTCCCTCCAACGCGCACATGGCCAGCTCCTAGATTCCACCCTTCAACCCACTTGTTTCCTGCCTGATGCACATGACCTGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573788.5
ENST00000632508.1
CDS-3UTR CAA 90 bp AGGACGCTCAGCTGGACCAGTATGCCTCAGGGAGAACTCAGCCGTGAGATGCTTGAACCCGTCTCTGGGTaGGGCTCACAAAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RTLSWTSMPQGELSREMLEPVSG*GSQKLG
Trigger: CCCCAACTTTTGTGAGCCCAACCCAGAGACGGGTTC...AAGCATCTCACGGCTGAGTTCTCCCTGAGGCATACTGGTCCAGCTGAGCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp TGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCGTCCACAGGCGAGTaGGGTCTGGGTCATTTACCA +
Preference number: 5 (lower is better)
Translates to: WPADLEVKAGSWTTILASPSTGE*GLGHLP
Trigger: TGGTAAATGACCCAGACCCAACTCGCCTGTGGACGG...GCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 90 bp AGAAACCTGCATTCTGGCTCCTGGTTCTTGTCACGGATGCCATGGTaGGAACAGGCCCCTTTAGGCTGTGCCTTGGCACTTGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: RNLHSGSWFLSRMPW*EQAPLGCALALGDC
Trigger: ACAGTCCCCAAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATCCGTGACAAGAACCAGGAGCCAGAATGCAGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572508.1
ENST00000576471.1
ENST00000631815.1
ENST00000633989.1
CDS-3UTR CAA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCTTCTCCGTCCTCGTGTaGTGGCCCCGGCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVFSVLV*WPRPQQ
Trigger: CTGCTGTGGCCGGGGCCACAACACGAGGACGGAGAA...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 90 bp AGGTGGAGGACGAAGCGTAACTGTCTTCCAGTTGTCCAGAAAGGCTaGGCAAGGTCCTGGGTCACCTTCTCTGTTCTAGGCCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: RWRTKRNCLPVVQKG*ARSWVTFSVLGPSE
Trigger: CTCTGATGGGCCTAGAACAGAGAAGGTGACCCAGGACCTTGCCCAGCCTTTCTGGACAACTGGAAGACAGTTACGCTTCGTCCTCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS-3UTR CAA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGCCAGGGACCACCAAATaGGGTAGCCAGCGAGGACCC +
Preference number: 5 (lower is better)
Translates to: KGVGDCWFPFELLIQILGPGTTK*GSQRGP
Trigger: GGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTGG...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGCGGCCCGCCTCGTTGTaGTGCTTGTTCATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVRPASL*CLFMAE
Trigger: CTCGGCCATGAACAAGCACAACAACGAGGCGGGCCG...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CCCTCACGGACCCTTTGTCTAACTTATACTAAGGTGACCTGGAGTCCAACTGCTCGGCCCGCCTCGTTGTaGTGCTTGTTCATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: PSRTLCLTYTKVTWSPTARPASL*CLFMAE
Trigger: CTCGGCCATGAACAAGCACAACAACGAGGCGGGCCG...AGCAGTTGGACTCCAGGTCACCTTAGTATAAGTTAGACAAAGGGTCCGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCTTGAAGAGCGAGTACTaGGCCCGGAGGGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVLKSEY*ARRVST
Trigger: GGTGGAGACCCTCCGGGCCAAGTACTCGCTCTTCAA...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCATTCTCCGTCCTCGTGTaGTGGCCCCGGCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAFSVLV*WPRPQQ
Trigger: CTGCTGTGGCCGGGGCCACAACACGAGGACGGAGAA...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp TTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCATTGGAATTTCAGGAATaGATGGCTACTCCCTCACGG +
Preference number: 5 (lower is better)
Translates to: LEVKAGSWTTILASPPAPLEFQE*MATPSR
Trigger: CCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCAA...TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GGCTCCTGGACGACCATCTTGGCAAGCCCACCTGCACCAGCTGGGAGATCGCTGTTCTCCCTAAGACAGTaGTTGAACCAATTCATACTG +
Preference number: 5 (lower is better)
Translates to: GSWTTILASPPAPAGRSLFSLRQ*LNQFIL
Trigger: CAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAA...CAGCGATCTCCCAGCTGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 90 bp AAGCGTAACTGTCTTCCAGTTGTCCAGAAAGGCTGGGCAAGGTCCTaGGTCACCTTCTCTGTTCTAGGCCCATCAGAGGCTTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KRNCLPVVQKGWARS*VTFSVLGPSEAFFR
Trigger: CCTGAAGAAAGCCTCTGATGGGCCTAGAACAGAGAAGGTGACCCAGGACCTTGCCCAGCCTTTCTGGACAACTGGAAGACAGTTACGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS CCA 90 bp AGTTTGCCCGCGACCATGAAGAGGGGGAGCGACGCCCCCAATAGTTaGAACAAAGTCCACTTGAGATTGGAAATGACTTTCGGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: SLPATMKRGSDAPNS*NKVHLRLEMTFGLV
Trigger: GACAAGCCCGAAAGTCATTTCCAATCTCAAGTGGACTTTGTTCCAACTATTGGGGGCGTCGCTCCCCCTCTTCATGGTCGCGGGCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGGACTCGCGGGTGGCTTaGTCGAGGACGGGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKDSRVA*SRTGPK
Trigger: CTTTGGGCCCGTCCTCGACAAAGCCACCCGCGAGTC...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTTTGAAGAGCGAGTACTaGGCCCGGAGGGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGLKSEY*ARRVST
Trigger: GGTGGAGACCCTCCGGGCCAAGTACTCGCTCTTCAA...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTGCAAGTCCGGTCCCTaGTGCCAAAGGAACCCGTCT +
Preference number: 5 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVCKSGP*CQRNPS
Trigger: AGACGGGTTCCTTTGGCACAAGGGACCGGACTTGCA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTTCTCCGTCCTCGTGTaGTGGCCCCGGCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKFSVLV*WPRPQQ
Trigger: CTGCTGTGGCCGGGGCCACAACACGAGGACGGAGAA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGCCGTCCACAGGCGAGTaGGGTCTGGGTCATTTACCA +
Preference number: 5 (lower is better)
Translates to: KGVGDCWFPFELLIQILGPSTGE*GLGHLP
Trigger: TGGTAAATGACCCAGACCCAACTCGCCTGTGGACGG...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CTGTGCCCGGCTCTAGGTCCTGCTTCCCATGAGACTTCGCTGAATCCGCCCAGCGAAATTAGCTCAAATTaGAATGGGAGTGGACCAAGA +
Preference number: 5 (lower is better)
Translates to: LCPALGPASHETSLNPPSEISSN*NGSGPR
Trigger: TCTTGGTCCACTCCCATTCAAATTTGAGCTAATTTC...GCTGGGCGGATTCAGCGAAGTCTCATGGGAAGCAGGACCTAGAGCCGGGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 90 bp GCACCTCTCCAACACTTGCTAAGATCCTTTTGTTGGAGGGAGAGGTaGAGGACGAAGCGTAACTGTCTTCCAGTTGTCCAGAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: APLQHLLRSFCWRER*RTKRNCLPVVQKGW
Trigger: CCAGCCTTTCTGGACAACTGGAAGACAGTTACGCTTCGTCCTCCACCTCTCCCTCCAACAAAAGGATCTTAGCAAGTGTTGGAGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572508.1
CDS-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGGTGCGGCCCGCCTCGTaGTTGTGCTTGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKVRPAS*LCLFMA
Trigger: GGCCATGAACAAGCACAACAACGAGGCGGGCCGCAC...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTCACCCTCCAGGCGTCTaGGAATGTCACCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGHPPGV*ECHQKQ
Trigger: CTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGTG...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGCCGTGGGAGGTGACATaGCAAGTCCGGTCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKPWEVT*QVRSLV
Trigger: CACAAGGGACCGGACTTGCAATGTCACCTCCCACGG...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTCTACCTGGAGTTATTaGTACAGAGAATCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTSTWSY*YRESAG
Trigger: ACCTGCAGATTCTCTGTACAAATAACTCCAGGTAGA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTCCTGGACGACCATCTaGGCAAGCCCACCTGCACCA +
Preference number: 5 (lower is better)
Translates to: EAKGWFSSSPSASHKVGISWTTI*ASPPAP
Trigger: TGGTGCAGGTGGGCTTGCCAAGATGGTCGTCCAGGA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GTGGCCAGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGTTACTTGTCAGCTACTaGAATACGCCCCAGAAACAT +
Preference number: 5 (lower is better)
Translates to: VASRFRSEGGLLDDHLGKLLVSY*NTPQKH
Trigger: ATGTTTCTGGGGCGTATTCAAGTAGCTGACAAGTAA...CTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTGCAAGTCCGGTCCCTaGTGCCAAAGGAACCCGTCT +
Preference number: 5 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKCKSGP*CQRNPS
Trigger: AGACGGGTTCCTTTGGCACAAGGGACCGGACTTGCA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTCACCCTCCAGGCGTCTaGGAATGTCACCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIHPPGV*ECHQKQ
Trigger: CTGCTTCTGGTGACATTCCAAGACGCCTGGAGGGTG...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTGAAATTAGCTCAAATTaGAATGGGAGTGGACCAAGA +
Preference number: 5 (lower is better)
Translates to: ADLEVKAGSWTTILASPPEISSN*NGSGPR
Trigger: TCTTGGTCCACTCCCATTCAAATTTGAGCTAATTTC...AGGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTCCATGTGCCTCCCTTTaGCTAGCTTTCTCTAGGACG +
Preference number: 5 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSPCASL*LAFSRT
Trigger: CGTCCTAGAGAAAGCTAGCAAAAGGGAGGCACATGG...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp AGCAGATTTAGAAGTGAAGGCGGGCTCCTGGACGACCATCTTGGCAAGCCCACCTTCTCCCTAAGACAGTaGTTGAACCAATTCATACTG +
Preference number: 5 (lower is better)
Translates to: SRFRSEGGLLDDHLGKPTFSLRQ*LNQFIL
Trigger: CAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAA...GGTGGGCTTGCCAAGATGGTCGTCCAGGAGCCCGCCTTCACTTCTAAATCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS TCA 90 bp AGGGCCACGGGTGTTCTAGAAGGTGAGGCATGGGTTAAACCACTTTaGATCACACATGGAGAAAGCTCATTTATTCACACCCCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: RATGVLEGEAWVKPL*ITHGESSFIHTPCS
Trigger: GGAACAGGGGGTGTGAATAAATGAGCTTTCTCCATGTGTGATTCAAAGTGGTTTAACCCATGCCTCACCTTCTAGAACACCCGTGGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572508.1
ENST00000633989.1
CDS-3UTR CAA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCGGCCCGCCTCGTTGTaGTGCTTGTTCATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVRPASL*CLFMAE
Trigger: CTCGGCCATGAACAAGCACAACAACGAGGCGGGCCG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGCTCTCCGTGGGTGGCTaGAAGAGCGAGTACTTGGCC +
Preference number: 5 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVLSVGG*KSEYLA
Trigger: GGCCAAGTACTCGCTCTTCAAGCCACCCACGGAGAG...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTTTGGAATTTCAGGAATaGATGGCTACTCCCTCACGG +
Preference number: 5 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSLEFQE*MATPSR
Trigger: CCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCAA...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTCCATGTGCCTCCCTTTaGCTAGCTTTCTCTAGGACG +
Preference number: 5 (lower is better)
Translates to: EAKGWFSSSPSASHKVGIPCASL*LAFSRT
Trigger: CGTCCTAGAGAAAGCTAGCAAAAGGGAGGCACATGG...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGTGCAAGTCCGGTCCCTaGTGCCAAAGGAACCCGTCT +
Preference number: 5 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVCKSGP*CQRNPS
Trigger: AGACGGGTTCCTTTGGCACAAGGGACCGGACTTGCA...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCATTGGAATTTCAGGAATaGATGGCTACTCCCTCACGG +
Preference number: 5 (lower is better)
Translates to: TSNPDPWELHGWKLSQHALEFQE*MATPSR
Trigger: CCGTGAGGGAGTAGCCATCAATTCCTGAAATTCCAA...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTTTTGGATACAGCAGGTaGGTAGGAAATTTCGGTTGG +
Preference number: 5 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSFGYSR*VGNFGW
Trigger: CCAACCGAAATTTCCTACCAACCTGCTGTATCCAAA...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp AAGGGAGTAGGTGACTGCTGGTTCCCCTTTGAACTTCTAATCCAGATCCTTGGGAAAGTCCACTTGAGATaGGAAATGACTTTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: KGVGDCWFPFELLIQILGKVHLR*EMTFGL
Trigger: AAGCCCGAAAGTCATTTCCAATCTCAAGTGGACTTT...CCCAAGGATCTGGATTAGAAGTTCAAAGGGGAACCAGCAGTCACCTACTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCGAAATTAGCTCAAATTaGAATGGGAGTGGACCAAGA +
Preference number: 5 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVEISSN*NGSGPR
Trigger: TCTTGGTCCACTCCCATTCAAATTTGAGCTAATTTC...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ACTTCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCATTTGGATACAGCAGGTaGGTAGGAAATTTCGGTTGG +
Preference number: 5 (lower is better)
Translates to: TSNPDPWELHGWKLSQHAFGYSR*VGNFGW
Trigger: CCAACCGAAATTTCCTACCAACCTGCTGTATCCAAA...TGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp TCTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTAAAGTCCACTTGAGATaGGAAATGACTTTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: SNPDPWELHGWKLSQHAGKVHLR*EMTFGL
Trigger: AAGCCCGAAAGTCATTTCCAATCTCAAGTGGACTTT...ACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CTAATCCAGATCCTTGGGAACTGCATGGATGGAAGCTATCTCAGCATGCAGGTGTGGAACAAAGTCCACTaGAGATTGGAAATGACTTTC +
Preference number: 5 (lower is better)
Translates to: LIQILGNCMDGSYLSMQVWNKVH*RLEMTF
Trigger: GAAAGTCATTTCCAATCTCAAGTGGACTTTGTTCCA...CACCTGCATGCTGAGATAGCTTCCATCCATGCAGTTCCCAAGGATCTGGATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GTCTGTGTTTACTCACATTGGCCCCAGAGAGGAAAGGACACAGTAAGATGGGTCTGGAACAAAGTCCACTaGAGATTGGAAATGACTTTC +
Preference number: 5 (lower is better)
Translates to: VCVYSHWPQRGKDTVRWVWNKVH*RLEMTF
Trigger: GAAAGTCATTTCCAATCTCAAGTGGACTTTGTTCCA...GACCCATCTTACTGTGTCCTTTCCTCTCTGGGGCCAATGTGAGTAAACACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAATGTCACCAGAAGCAGCAGTTTGGAAACAGAACCTTGCCCATGCTGATGTCTTTCTCCCTAAGACAGTaGTTGAACCAATTCATACTG +
Preference number: 5 (lower is better)
Translates to: ECHQKQQFGNRTLPMLMSFSLRQ*LNQFIL
Trigger: CAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAA...AGACATCAGCATGGGCAAGGTTCTGTTTCCAAACTGCTGCTTCTGGTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTTTGGATACAGCAGGTaGGTAGGAAATTTCGGTTGG +
Preference number: 5 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKFGYSR*VGNFGW
Trigger: CCAACCGAAATTTCCTACCAACCTGCTGTATCCAAA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp ATCTTTGTTCTGCTCATTCCCCTGCTGCATCTCTTCTTTCTGATTCTCCCTAAGTCTACCTGGAGTTATTaGTACAGAGAATCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: IFVLLIPLLHLFFLILPKSTWSY*YRESAG
Trigger: ACCTGCAGATTCTCTGTACAAATAACTCCAGGTAGA...CTTAGGGAGAATCAGAAAGAAGAGATGCAGCAGGGGAATGAGCAGAACAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp GAAGCAAAGGGATGGTTTTCATCCTCCCCATCTGCTAGTCACAAAGTTGGAATTTCTACCTGGAGTTATTaGTACAGAGAATCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: EAKGWFSSSPSASHKVGISTWSY*YRESAG
Trigger: ACCTGCAGATTCTCTGTACAAATAACTCCAGGTAGA...AATTCCAACTTTGTGACTAGCAGATGGGGAGGATGAAAACCATCCCTTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS-3UTR CAA 90 bp CATCTCTTCTTTCTGATTCTCCCTAAGACAGTTGTTGAACCAATTCATACTGTGTTACTTGTCAGCTACTaGAATACGCCCCAGAAACAT +
Preference number: 5 (lower is better)
Translates to: HLFFLILPKTVVEPIHTVLLVSY*NTPQKH
Trigger: ATGTTTCTGGGGCGTATTCAAGTAGCTGACAAGTAA...CACAGTATGAATTGGTTCAACAACTGTCTTAGGGAGAATCAGAAAGAAGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS TCA 72 bp CGCAAATGGTGGAGGTGCCCTCGGCGCAGGAGCGGGTaGCGGCGAAGGCCACGCCGGCCGAGGCGATGGCGT +
Preference number: 6 (lower is better)
Translates to: RKWWRCPRRRSG*RRRPRRPRRWR
Trigger: ACGCCATCGCCTCGGCCGGCGTGGCCTTCGCCGTCACCCGCTCCTGCGCCGAGGGCACCTCCACCATTTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 72 bp CCAGGGACCACCAAATTGGGTAGCCAGCGAGGACCCTaGTGCCACCGAGCAGGAGGCCGAGGAGCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: PGTTKLGSQRGP*CHRAGGRGAAR
Trigger: TCGGGCTGCTCCTCGGCCTCCTGCTCGGTGGCACCAGGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 72 bp CGTCCGGCCTGTTCTCGCGCGCATCCGCGAACTCCCTaGACACTAACACGCCGAAGTCAGCGTCCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: RPACSRAHPRTP*TLTRRSQRPRC
Trigger: GCAGCGAGGACGCTGACTTCGGCGTGTTAGTGTCCAGGGAGTTCGCGGATGCGCGCGAGAACAGGCCGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CAA 72 bp ATGTGGTCCAGGATAGTCGTGCGGCCCGCCTCGTTGTaGTGCTTGTTCATGGCCGAGCGCGCGTCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: MWSRIVVRPASL*CLFMAERASGL
Trigger: CAGGCCGGACGCGCGCTCGGCCATGAACAAGCACAACAACGAGGCGGGCCGCACGACTATCCTGGACCACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CAA 72 bp TGCATGTGGTCCAGGATAGTCGTGCGGCCCGCCTCGTaGTTGTGCTTGTTCATGGCCGAGCGCGCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: CMWSRIVVRPAS*LCLFMAERASG
Trigger: GCCGGACGCGCGCTCGGCCATGAACAAGCACAACAACGAGGCGGGCCGCACGACTATCCTGGACCACATGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS GCA 72 bp ACGGATGCCATGGTGGGAACAGGCCCCTTTAGGCTGTaGCTTGGCACTTGGGGACTGTCCCTGCAGCGCAGT +
Preference number: 6 (lower is better)
Translates to: TDAMVGTGPFRL*LGTWGLSLQRS
Trigger: ACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572508.1
ENST00000576471.1
ENST00000631815.1
ENST00000633989.1
CDS CCA 72 bp GTGGGAACAGGCCCCTTTAGGCTGTGCCTTGGCACTTaGGGACTGTCCCTGCAGCGCAGTGACTGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: VGTGPFRLCLGT*GLSLQRSDCCV
Trigger: GACACAGCAGTCACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576471.1
ENST00000631815.1
CDS TCA 72 bp AGAAGAGGCGCCGAGGAGGAAGTTTGCCCGCGACCATaGAGAGGGGGAGCGACGCCCCCAATAGTTGGAACA +
Preference number: 6 (lower is better)
Translates to: RRGAEEEVCPRP*RGGATPPIVGT
Trigger: TGTTCCAACTATTGGGGGCGTCGCTCCCCCTCTTCATGGTCGCGGGCAAACTTCCTCCTCGGCGCCTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS GCA 72 bp CTTGGCACTTGGGGACTGTCCCTGCAGCGCAGTGACTaGTGTGTCCCTGAAGAGTCCACCACACAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: LGTWGLSLQRSD*CVPEESTTQPG
Trigger: TCCTGGCTGTGTGGTGGACTCTTCAGGGACACAGCAGTCACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576471.1
ENST00000631815.1
CDS GCA 72 bp CCTTTAGGCTGTGCCTTGGCACTTGGGGACTGTCCCTaGAGCGCAGTGACTGCTGTGTCCCTGAAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: PLGCALALGDCP*SAVTAVSLKSP
Trigger: TGGACTCTTCAGGGACACAGCAGTCACTGCGCTGCAGGGACAGTCCCCAAGTGCCAAGGCACAGCCTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576471.1
ENST00000631815.1
CDS CAA 90 bp AGGGAGCTGACAAGTCCCAGAAACCTGCATTCTGGCTCCTGGTTCTaGTCACGGATGCCATGGTGGGAACAGGCCCCTTTAGGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: RELTSPRNLHSGSWF*SRMPWWEQAPLGCA
Trigger: GGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATCCGTGACAAGAACCAGGAGCCAGAATGCAGGTTTCTGGGACTTGTCAGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS CAA 90 bp CGCGTTGGAGGGAGAGGTGGAGGACGAAGCGTAACTGTCTTCCAGTaGTCCAGAAAGGCTGGGCAAGGTCCTGGGTCACCTTCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: RVGGRGGGRSVTVFQ*SRKAGQGPGSPSLF
Trigger: GAACAGAGAAGGTGACCCAGGACCTTGCCCAGCCTTTCTGGACAACTGGAAGACAGTTACGCTTCGTCCTCCACCTCTCCCTCCAACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573788.5
ENST00000632508.1
CDS CCA 72 bp CTGCATTCTGGCTCCTGGTTCTTGTCACGGATGCCATaGTGGGAACAGGCCCCTTTAGGCTGTGCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LHSGSWFLSRMP*WEQAPLGCALA
Trigger: TGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATCCGTGACAAGAACCAGGAGCCAGAATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS CAA 90 bp CACGTTGGAGGGAGAGGTGGAGGACGAAGCGTAACTGTCTTCCAGTaGTCCAGAAAGGCTGGGCAAGGTCCTGGGTCACCTTCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: HVGGRGGGRSVTVFQ*SRKAGQGPGSPSLF
Trigger: GAACAGAGAAGGTGACCCAGGACCTTGCCCAGCCTTTCTGGACAACTGGAAGACAGTTACGCTTCGTCCTCCACCTCTCCCTCCAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576471.1
ENST00000631815.1
CDS TCA 72 bp CGCAGGTCATGTGCATCAGGCAGGAAACAAGTGGGTTaGAGGGTGGAATCTAGGAGCTGGCCATGTGCGCGT +
Preference number: 6 (lower is better)
Translates to: RRSCASGRKQVG*RVESRSWPCAR
Trigger: ACGCGCACATGGCCAGCTCCTAGATTCCACCCTTCAACCCACTTGTTTCCTGCCTGATGCACATGACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573788.5
ENST00000632508.1
CDS CCA 72 bp GCAAGTCCGGTCCCTTGTGCCAAAGGAACCCGTCTCTaGGTTGGGCTCACAAAAGTTGGGGGAGTTCTCGTA +
Preference number: 6 (lower is better)
Translates to: ASPVPCAKGTRL*VGLTKVGGVLV
Trigger: TACGAGAACTCCCCCAACTTTTGTGAGCCCAACCCAGAGACGGGTTCCTTTGGCACAAGGGACCGGACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225512.6
ENST00000611547.1
ENST00000616347.2
CDS CCA 72 bp CATTCTGGCTCCTGGTTCTTGTCACGGATGCCATGGTaGGAACAGGCCCCTTTAGGCTGTGCCTTGGCACTT +
Preference number: 6 (lower is better)
Translates to: HSGSWFLSRMPW*EQAPLGCALAL
Trigger: AAGTGCCAAGGCACAGCCTAAAGGGGCCTGTTCCCACCATGGCATCCGTGACAAGAACCAGGAGCCAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS CAA 90 bp AGGGGGAGCGACGCCCCCAATAGTTGGAACAAAGTCCACTTGAGATaGGAAATGACTTTCGGGCTTGTCAGAAGCGCACCTCCACCCGCA +
Preference number: 6 (lower is better)
Translates to: RGSDAPNSWNKVHLR*EMTFGLVRSAPPPA
Trigger: TGCGGGTGGAGGTGCGCTTCTGACAAGCCCGAAAGTCATTTCCAATCTCAAGTGGACTTTGTTCCAACTATTGGGGGCGTCGCTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS CAA 90 bp TTTGTTGGAGGGAGAGGTGGAGGACGAAGCGTAACTGTCTTCCAGTaGTCCAGAAAGGCTGGGCAAGGTCCTGGGTCACCTTCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: FVGGRGGGRSVTVFQ*SRKAGQGPGSPSLF
Trigger: GAACAGAGAAGGTGACCCAGGACCTTGCCCAGCCTTTCTGGACAACTGGAAGACAGTTACGCTTCGTCCTCCACCTCTCCCTCCAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572508.1
ENST00000633989.1
CDS CCA 72 bp ACGAAGCGTAACTGTCTTCCAGTTGTCCAGAAAGGCTaGGCAAGGTCCTGGGTCACCTTCTCTGTTCTAGGC +
Preference number: 6 (lower is better)
Translates to: TKRNCLPVVQKG*ARSWVTFSVLG
Trigger: GCCTAGAACAGAGAAGGTGACCCAGGACCTTGCCCAGCCTTTCTGGACAACTGGAAGACAGTTACGCTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572508.1
ENST00000573788.5
ENST00000576471.1
ENST00000631815.1
ENST00000632508.1
ENST00000633989.1
CDS CCA 72 bp TCAGACGCAGGTCATGTGCATCAGGCAGGAAACAAGTaGGTTGAAGGGTGGAATCTAGGAGCTGGCCATGTG +
Preference number: 6 (lower is better)
Translates to: SDAGHVHQAGNK*VEGWNLGAGHV
Trigger: CACATGGCCAGCTCCTAGATTCCACCCTTCAACCCACTTGTTTCCTGCCTGATGCACATGACCTGCGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573788.5
ENST00000632508.1
CDS CCA 72 bp GCGACCATGAAGAGGGGGAGCGACGCCCCCAATAGTTaGAACAAAGTCCACTTGAGATTGGAAATGACTTTC +
Preference number: 6 (lower is better)
Translates to: ATMKRGSDAPNS*NKVHLRLEMTF
Trigger: GAAAGTCATTTCCAATCTCAAGTGGACTTTGTTCCAACTATTGGGGGCGTCGCTCCCCCTCTTCATGGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS CAA 72 bp GTTGGTCCTAATACGACTTCAGCACCTCTCCAACACTaGCTAAGATCCTTTTGTTGGAGGGAGAGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: VGPNTTSAPLQH*LRSFCWRERWR
Trigger: CCTCCACCTCTCCCTCCAACAAAAGGATCTTAGCAAGTGTTGGAGAGGTGCTGAAGTCGTATTAGGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572508.1
CDS CAA 72 bp GACGCCCCCAATAGTTGGAACAAAGTCCACTTGAGATaGGAAATGACTTTCGGGCTTGTCAGAAGCGCACCT +
Preference number: 6 (lower is better)
Translates to: DAPNSWNKVHLR*EMTFGLVRSAP
Trigger: AGGTGCGCTTCTGACAAGCCCGAAAGTCATTTCCAATCTCAAGTGGACTTTGTTCCAACTATTGGGGGCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611547.1
ENST00000616347.2
CDS CAA 90 bp AAAAGTCTGGTTGGTCCTAATACGACTTCAGCACCTCTCCAACACTaGCTAAGATCCTTTTGTTGGAGGGAGAGGTGGAGGACGAAGCGT +
Preference number: 6 (lower is better)
Translates to: KSLVGPNTTSAPLQH*LRSFCWRERWRTKR
Trigger: ACGCTTCGTCCTCCACCTCTCCCTCCAACAAAAGGATCTTAGCAAGTGTTGGAGAGGTGCTGAAGTCGTATTAGGACCAACCAGACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572508.1
CDS CCA 72 bp CCTTCACTCCTTCTGAGTATCCTCAAAGAAAAAGTCTaGTTGGTCCTAATACGACTTCAGCACCTCTCCAAC +
Preference number: 6 (lower is better)
Translates to: PSLLLSILKEKV*LVLIRLQHLSN
Trigger: GTTGGAGAGGTGCTGAAGTCGTATTAGGACCAACCAGACTTTTTCTTTGAGGATACTCAGAAGGAGTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572508.1
CDS CAA 72 bp TCACTCCTTCTGAGTATCCTCAAAGAAAAAGTCTGGTaGGTCCTAATACGACTTCAGCACCTCTCCAACACT +
Preference number: 6 (lower is better)
Translates to: SLLLSILKEKVW*VLIRLQHLSNT
Trigger: AGTGTTGGAGAGGTGCTGAAGTCGTATTAGGACCAACCAGACTTTTTCTTTGAGGATACTCAGAAGGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572508.1