RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT2B (Homo sapiens)

Ensembl gene IDs: ENSG00000134245

Ensembl transcript IDs: ENST00000256640.9, ENST00000369684.5, ENST00000369686.9, ENST00000478360.1

Found 1011 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTaGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGAC +
Preference number: 1 (lower is better)
Translates to: PRGRLCRIAYGELCV*HLSPQGPGAQGPTD
Trigger: GTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp GGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTaGCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGCT +
Preference number: 1 (lower is better)
Translates to: GTSLHKAQAPRVPPT*PGMHHIVLWCCNLA
Trigger: AGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp TCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATaGATCACATTGTTCTCTGGTGCTGTAATTTGGCTGCAGGAGCTA +
Preference number: 1 (lower is better)
Translates to: STRPRRPGSHRPAQE*ITLFSGAVIWLQEL
Trigger: TAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp TGCTGTAATTTGGCTGCAGGAGCTAGGCTGAATGCCTCCCAGGGATaGGAAACATACTCTCCCTGGCGTCCTCCCTTCGCCCCAGCTAGC +
Preference number: 1 (lower is better)
Translates to: CCNLAAGARLNASQG*ETYSPWRPPFAPAS
Trigger: GCTAGCTGGGGCGAAGGGAGGACGCCAGGGAGAGTATGTTTCTCATCCCTGGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp TCTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTCTGCAGGATTaGTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCC +
Preference number: 1 (lower is better)
Translates to: SPVFHFCTQGAALQD*LRRTLCLAPLSTRP
Trigger: GGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCAGAAATGAAATACGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 90 bp CCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTaGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAATGCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: PRVPPTCPGMHHIVL*CCNLAAGARLNASQ
Trigger: CTGGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp AGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTaGTGTAATTTGGCTGCAGGAGCTAGGCTGAATGCCTCCCAGGGA +
Preference number: 1 (lower is better)
Translates to: RVPPTCPGMHHIVLW*CNLAAGARLNASQG
Trigger: TCCCTGGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp TCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCTAAGGAACCAGCCAGGACACCATGG +
Preference number: 1 (lower is better)
Translates to: SRAGNQGACSVSYIP*QLLPRAKEPARTPW
Trigger: CCATGGTGTCCTGGCTGGTTCCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp GGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATTaGTTGCATCAGCTTGAGATCCCAGGACCTTTGCCAGGCCACGGG +
Preference number: 1 (lower is better)
Translates to: GFSAGLRPLALVYTN*LHQLEIPGPLPGHG
Trigger: CCCGTGGCCTGGCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp TGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGGACCTTTaGCAGGCCACGGGTAGGCATCTGTCTGGCTTGGGATGGGAGTTT +
Preference number: 1 (lower is better)
Translates to: WCTQIACISLRSQDL*QATGRHLSGLGWEF
Trigger: AAACTCCCATCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 90 bp GATCCCAGGACCTTTGCCAGGCCACGGGTAGGCATCTGTCTGGCTTaGGATGGGAGTTTCTTAGGACACTTATTCCCTCATCTTGCTTTC +
Preference number: 1 (lower is better)
Translates to: DPRTFARPRVGICLA*DGSFLGHLFPHLAF
Trigger: GAAAGCAAGATGAGGGAATAAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCAAAGGTCCTGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp TGGGCCCTTGAGATCAGACCTGCTTACCTGCTCTCCCACCATCCATaGGTTGCCTATCTTTCTTTTACTCCATGTCTCCCCAAACCTGGC +
Preference number: 1 (lower is better)
Translates to: WALEIRPAYLLSHHP*VAYLSFTPCLPKPG
Trigger: GCCAGGTTTGGGGAGACATGGAGTAAAAGAAAGATAGGCAACTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGATCTCAAGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp CCCAACCTCCTGCTGCCTGTGCAGAGTGAAGCTGCTTCAAAAACATaGGGACCCCAAGGGATATTGGAGAGGAACTTTGGAAAGACAGGG +
Preference number: 1 (lower is better)
Translates to: PNLLLPVQSEAASKT*GPQGILERNFGKTG
Trigger: CCCTGTCTTTCCAAAGTTCCTCTCCAATATCCCTTGGGGTCCTCATGTTTTTGAAGCAGCTTCACTCTGCACAGGCAGCAGGAGGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp ATCACATTGTTCTCTGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTaGATGCCTCCCAGGGATGAGAAACATACTCTCCCTGGCGTCCTC +
Preference number: 1 (lower is better)
Translates to: ITLFSGAVIWLQELG*MPPRDEKHTLPGVL
Trigger: GAGGACGCCAGGGAGAGTATGTTTCTCATCCCTGGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp TGGCCCCAACCTGCAGTACTCCTTCCCACTGTAGCCACTGACTCCTaGTCCCAGCTTCAAAGGCTAGGATCCTCTCATAAAGAATTACCA +
Preference number: 1 (lower is better)
Translates to: WPQPAVLLPTVATDS*SQLQRLGSSHKELP
Trigger: TGGTAATTCTTTATGAGAGGATCCTAGCCTTTGAAGCTGGGAGCAGGAGTCAGTGGCTACAGTGGGAAGGAGTACTGCAGGTTGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 90 bp CAGGACCTTTGCCAGGCCACGGGTAGGCATCTGTCTGGCTTGGGATaGGAGTTTCTTAGGACACTTATTCCCTCATCTTGCTTTCCTAAC +
Preference number: 1 (lower is better)
Translates to: QDLCQATGRHLSGLG*EFLRTLIPSSCFPN
Trigger: GTTAGGAAAGCAAGATGAGGGAATAAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCAAAGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp AGTTATCCAGTTGACTCCATTCTGAAGGAAGACATTCTCTTGGCCTaGCTCACTCAGGCCCATTTCTCCACAGGCATCCCCTTACCGCAG +
Preference number: 1 (lower is better)
Translates to: SYPVDSILKEDILLA*LTQAHFSTGIPLPQ
Trigger: CTGCGGTAAGGGGATGCCTGTGGAGAAATGGGCCTGAGTGAGTCAGGCCAAGAGAATGTCTTCCTTCAGAATGGAGTCAACTGGATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp GAAAAGGAAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATaGCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGG +
Preference number: 1 (lower is better)
Translates to: EKEASLSCYPTLLQR*PTPVVAGSSQVEGR
Trigger: CCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGATAACAAGAAAGAGATGCTTCCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp AAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATaGAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGC +
Preference number: 1 (lower is better)
Translates to: KQPQVMSSRLGSYTP*SHRRLLHHSQHIGC
Trigger: GCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 90 bp CTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTaGCATGAACCAGCCTTGCGAACTTATACAGTCTCAGCCACTCTG +
Preference number: 1 (lower is better)
Translates to: LLHHSQHIGCTSHYL*HEPALRTYTVSATL
Trigger: CAGAGTGGCTGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 90 bp TCAATTTCTGTTTTGAAGGTGCTGGGACTCTGGTGCCCCCAACCCTaGGCATCCTCAGGCTTTGAGGAGAATACACAGGATTTGAAGTCA +
Preference number: 1 (lower is better)
Translates to: SISVLKVLGLWCPQP*ASSGFEENTQDLKS
Trigger: TGACTTCAAATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCCCAGGGTTGGGGGCACCAGAGTCCCAGCACCTTCAAAACAGAAATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp CCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATaGACCAGCCTTGCGAACTTATACAGTCTCAGCCACTCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: PSFSAHRVHISLSLA*TSLANLYSLSHSAL
Trigger: CAAAGCAGAGTGGCTGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp CTTTTCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTaGCACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAG +
Preference number: 1 (lower is better)
Translates to: LFYPFTFEVRDRAYY*HPTGYCPIPANHPK
Trigger: CTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp CCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTaGACATCTCACTATCTCTGGCATGAACCAGCCTTGCGAACTTAT +
Preference number: 1 (lower is better)
Translates to: PCSHRRLLHHSQHIG*TSHYLWHEPALRTY
Trigger: ATAAGTTCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp TATACTGATGCCTCATGTGGGCCCTTGAGATCAGACCTGCTTACCTaGTCTCCCACCATCCATGAGTTGCCTATCTTTCTTTTACTCCAT +
Preference number: 1 (lower is better)
Translates to: YTDASCGPLRSDLLT*SPTIHELPIFLLLH
Trigger: ATGGAGTAAAAGAAAGATAGGCAACTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGGCATCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 90 bp CACACACACACAAACACACAAACACACACACACTCAGTGCCACACTaGGTCAGACCCATAGTTCAATACTCTGTTTCTGAAAGTGGCACC +
Preference number: 1 (lower is better)
Translates to: HTHTNTQTHTHSVPH*VRPIVQYSVSESGT
Trigger: GGTGCCACTTTCAGAAACAGAGTATTGAACTATGGGTCTGACCCAGTGTGGCACTGAGTGTGTGTGTGTTTGTGTGTTTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp CTTAATCCCACCATTGGCTCATCAGTTATCCAGTTGACTCCATTCTaGAGGAAGACATTCTCTTGGCCTGACTCACTCAGGCCCATTTCT +
Preference number: 1 (lower is better)
Translates to: LNPTIGSSVIQLTPF*RKTFSWPDSLRPIS
Trigger: AGAAATGGGCCTGAGTGAGTCAGGCCAAGAGAATGTCTTCCTTCAGAATGGAGTCAACTGGATAACTGATGAGCCAATGGTGGGATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp AGACCTATGAAGCTGCTGTCATCAGCAGCTCATTCAACACTCTCCTaGTCTGCCTCTTTTCCAGGAGTCAGGGTTAGTTTAAGAAAAAGC +
Preference number: 1 (lower is better)
Translates to: RPMKLLSSAAHSTLS*SASFPGVRVSLRKS
Trigger: GCTTTTTCTTAAACTAACCCTGACTCCTGGAAAAGAGGCAGAGCAGGAGAGTGTTGAATGAGCTGCTGATGACAGCAGCTTCATAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp CTCTCTTCTGTTAAGCCATGTAGAGACTCGTGTCCTGAGTGGGTCTaGGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATAAGGGA +
Preference number: 1 (lower is better)
Translates to: LSSVKPCRDSCPEWV*EFGKDLLVGVLDKG
Trigger: TCCCTTATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGTCTCTACATGGCTTAACAGAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp ATGGGAAAACAAAGAGGGGTTGAGAGCAGCAAGTGTTTGATCAAGTaGAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGAT +
Preference number: 1 (lower is better)
Translates to: MGKQRGVESSKCLIK*KSAVCLISWVSLQD
Trigger: ATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTCACTTGATCAAACACTTGCTGCTCTCAACCCCTCTTTGTTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp CGGAAAGCCAAGTTAGCTTTTTCCTTCCTTTATACACAAGACCTATaGAGCTGCTGTCATCAGCAGCTCATTCAACACTCTCCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: RKAKLAFSFLYTQDL*SCCHQQLIQHSPAL
Trigger: CAGAGCAGGAGAGTGTTGAATGAGCTGCTGATGACAGCAGCTTCATAGGTCTTGTGTATAAAGGAAGGAAAAAGCTAACTTGGCTTTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp CTAGGATCCTCTCATAAAGAATTACCAAAGCCAGAGATCCCTACCTaGCTAATATATACTGATGCCTCATGTGGGCCCTTGAGATCAGAC +
Preference number: 1 (lower is better)
Translates to: LGSSHKELPKPEIPT*LIYTDASCGPLRSD
Trigger: GTCTGATCTCAAGGGCCCACATGAGGCATCAGTATATATTAGGCAGGTAGGGATCTCTGGCTTTGGTAATTCTTTATGAGAGGATCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp GAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTaGCTTTGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTAT +
Preference number: 1 (lower is better)
Translates to: EFWSPNQRVACRLVM*LCRYSLIKARPYWY
Trigger: ATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp ATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTaGTGTCCAATACAGGTTGAGAATGGTAGAGAGAAAAAGAGAGAA +
Preference number: 1 (lower is better)
Translates to: IPPQFEQAASKQKRQ*CPIQVENGREKKRE
Trigger: TTCTCTCTTTTTCTCTCTACCATTCTCAACCTGTATTGGACAGCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp TCTGGCTTGGGATGGGAGTTTCTTAGGACACTTATTCCCTCATCTTaGTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAA +
Preference number: 1 (lower is better)
Translates to: SGLGWEFLRTLIPSS*FPNPGVDVIFKRSE
Trigger: TTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAATAAGTGTCCTAAGAAACTCCCATCCCAAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 90 bp ACCACTTGGTCTTTTCCAGTGCTTCTCTCTTATGGAGATCATCCCTaGAATCCAAAGCTCTCCAGTTTTCTAACCCAGTTAAGAGTTAAA +
Preference number: 1 (lower is better)
Translates to: TTWSFPVLLSYGDHP*NPKLSSFLTQLRVK
Trigger: TTTAACTCTTAACTGGGTTAGAAAACTGGAGAGCTTTGGATTCCAGGGATGATCTCCATAAGAGAGAAGCACTGGAAAAGACCAAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp TCCTCATTTATTAGTGAGCTGGTTTTGCAGTCTCTAAAGCTCTTTTaGAGCTCTTCTATTCACTATGGCCTCAGATACGATAAATCTGCT +
Preference number: 1 (lower is better)
Translates to: SSFISELVLQSLKLF*SSSIHYGLRYDKSA
Trigger: AGCAGATTTATCGTATCTGAGGCCATAGTGAATAGAAGAGCTGCAAAAGAGCTTTAGAGACTGCAAAACCAGCTCACTAATAAATGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp AATTTAGCTACCTTGCTCAAAATATCAAAGCAAATGGCACAGCTGTaGTTTTTAACCCGGGTCTGTCATAACCGCAAATTTCTATACCAC +
Preference number: 1 (lower is better)
Translates to: NLATLLKISKQMAQL*FLTRVCHNRKFLYH
Trigger: GTGGTATAGAAATTTGCGGTTATGACAGACCCGGGTTAAAAATCACAGCTGTGCCATTTGCTTTGATATTTTGAGCAAGGTAGCTAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 90 bp TTTGACAGTCTAGGTGCACACAGTCACCTCACATTATTTAAGCCCTaGTCTCAGCATTCTAATTTCTCTGTATTCCCCAGTGTATATAAT +
Preference number: 1 (lower is better)
Translates to: FDSLGAHSHLTLFKP*SQHSNFSVFPSVYN
Trigger: ATTATATACACTGGGGAATACAGAGAAATTAGAATGCTGAGATCAGGGCTTAAATAATGTGAGGTGACTGTGTGCACCTAGACTGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 90 bp CTTGTTCCAAATAAATTAGTGTCTATTTGTGTAATGCAGACTAAATaGCAGTTGTGTAAAGCCAATCAATGCAGAAGCAAGCTAAGAACT +
Preference number: 1 (lower is better)
Translates to: LVPNKLVSICVMQTK*QLCKANQCRSKLRT
Trigger: AGTTCTTAGCTTGCTTCTGCATTGATTGGCTTTACACAACTGGCATTTAGTCTGCATTACACAAATAGACACTAATTTATTTGGAACAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGGGGTGGAGGAAGGTGTaGATGCAAGGATCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGGWRKV*MQGSCA
Trigger: AGCACAAGATCCTTGCATGCACACCTTCCTCCACCC...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGACTTTGGCCCCAACCTaGAGTACTCCTTCCCACTGT +
Preference number: 2 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGTLAPT*STPSHC
Trigger: ACAGTGGGAAGGAGTACTGCAGGTTGGGGCCAAAGT...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp CTCTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTCTGCAGGATaGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCC +
Preference number: 2 (lower is better)
Translates to: LSRISFLHPGGGSAG*LTENSVSGTSLHKA
Trigger: GGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCAGAAATGAAATACGGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGAGCCAGGGGCTTTGGTaGAGAGGATCTGCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLSQGLW*RGSAGW
Trigger: CCAGCCCGCAGATCCTCTTCACCAAAGCCCCTGGCT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCAGGCAGTTCCCAAGTaGAGGGTCGGGGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPQAVPK*RVGAEA
Trigger: GGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGACAGCTGGGCACAGTaGCTTGCGCTTGTACGCCCA +
Preference number: 2 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLDSWAQ*LALVRP
Trigger: TGGGCGTACAAGCGCAAGCCACTGTGCCCAGCTGTC...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGACCTGCATGTTCTTGTaGGAACAGGGGCTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLTCMFL*EQGLAR
Trigger: CCTGGCCAGCCCCTGTTCTCACAAGAACATGCAGGT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCTACAGGCTGCGCAGCTaGGGTACTTCAGTCATGTGC +
Preference number: 2 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPYRLRS*GTSVMC
Trigger: GCACATGACTGAAGTACCTCAGCTGCGCAGCCTGTA...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGCCACCATCCATGAGTTaGCTATCTTTCTTTTACTCC +
Preference number: 2 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGPPSMS*LSFFYS
Trigger: GGAGTAAAAGAAAGATAGGCAACTCATGGATGGTGG...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAAAGGTGCTGGGACTCTaGTGCCCCCAACCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPKVLGL*CPQPWA
Trigger: TGCCCAGGGTTGGGGGCACCAGAGTCCCAGCACCTT...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp ATAATTAAAACTCAGCGTCTGACAGCTGGGCACAGTGGCTTGCGCTaGTACGCCCAGCACTTTGGAAGGCTGCAGTGGGAGGATTGCTTG +
Preference number: 2 (lower is better)
Translates to: IIKTQRLTAGHSGLR*YAQHFGRLQWEDCL
Trigger: CAAGCAATCCTCCCACTGCAGCCTTCCAAAGTGCTGGGCGTACAAGCGCAAGCCACTGTGCCCAGCTGTCAGACGCTGAGTTTTAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTAGATCCCAGGACCTTTaGCAGGCCACGGGTAGGCAT +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPRSQDL*QATGRH
Trigger: ATGCCTACCCGTGGCCTGGCAAAGGTCCTGGGATCT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGTGAGAACAGGGGCTaGCCAGGACCTGAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPCENRG*PGPEAF
Trigger: GAAAGCCTCAGGTCCTGGCCAGCCCCTGTTCTCACA...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCCGTTAGGGGGCCAGTaGGAGAATGCTTGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPPLGGQ*ENACLA
Trigger: TGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp CCTGGGACTCCTACAGGGCTTGAACATTTTGTATCAATTTCTGTTTaGAAGGTGCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTCA +
Preference number: 2 (lower is better)
Translates to: PGTPTGLEHFVSISV*KVLGLWCPQPWASS
Trigger: TGAGGATGCCCAGGGTTGGGGGCACCAGAGTCCCAGCACCTTCAAAACAGAAATTGATACAAAATGTTCAAGCCCTGTAGGAGTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp AGATCCCAGGACCTTTGCCAGGCCACGGGTAGGCATCTGTCTGGCTaGGGATGGGAGTTTCTTAGGACACTTATTCCCTCATCTTGCTTT +
Preference number: 2 (lower is better)
Translates to: RSQDLCQATGRHLSG*GWEFLRTLIPSSCF
Trigger: AAAGCAAGATGAGGGAATAAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCAAAGGTCCTGGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCGCTGCCTGTGCAGAGTaGAGCTGCTTCAAAAACATG +
Preference number: 2 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPAACAE*SCFKNM
Trigger: CATGTTTTTGAAGCAGCTTCACTCTGCACAGGCAGC...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGACTCTCTGGACAGCTTaGTCTTTTCTTAACCATTTA +
Preference number: 2 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGTLWTA*SFLNHL
Trigger: TAAATGGTTAAGAAAAGAGCAAGCTGTCCAGAGAGT...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTGATCTCTCCTCACCATaGCCTTCCTGCATCCTTCCC +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPDLSSP*PSCILP
Trigger: GGGAAGGATGCAGGAAGGGCATGGTGAGGAGAGATC...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCGGCAGTTATACCCCATaGAGTCATAGGAGACTGCTC +
Preference number: 2 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPGSYTP*SHRRLL
Trigger: GAGCAGTCTCCTATGACTGCATGGGGTATAACTGCC...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp GAGATCCCTACCTGCCTAATATATACTGATGCCTCATGTGGGCCCTaGAGATCAGACCTGCTTACCTGCTCTCCCACCATCCATGAGTTG +
Preference number: 2 (lower is better)
Translates to: EIPTCLIYTDASCGP*RSDLLTCSPTIHEL
Trigger: CAACTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGGCATCAGTATATATTAGGCAGGTAGGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp CTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTaGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGGACCT +
Preference number: 2 (lower is better)
Translates to: LPHLMGFSAGLRPLA*VYTNCLHQLEIPGP
Trigger: AGGTCCTGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLVSYIP*QLLPRA
Trigger: AGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAAC...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTAGCCAGGGGCTTTGGTaGAGAGGATCTGCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYASQGLW*RGSAGW
Trigger: CCAGCCCGCAGATCCTCTTCACCAAAGCCCCTGGCT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGAATGCCTCCCAGGGATaGGAAACATACTCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLNASQG*ETYSPW
Trigger: CCAGGGAGAGTATGTTTCTCATCCCTGGGAGGCATT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGCAGAGTAGCATGAGATaGCAGAAGAGGCCCATTTCC +
Preference number: 2 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLQSSMR*QKRPIS
Trigger: GGAAATGGGCCTCTTCTGGCATCTCATGCTACTCTG...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTAAACTGGCTACAGGCTaGGCAGCTGAGGTACTTCAG +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPKLATG*AAEVLQ
Trigger: CTGAAGTACCTCAGCTGCGCAGCCTGTAGCCAGTTT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCGTGGCCCAGAGCTATaGCTCCCCCAACCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYRGPEL*LPQPPA
Trigger: AGCAGGAGGTTGGGGGAGCCATAGCTCTGGGCCACG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCAGGCAGTTCCCAAGTaGAGGGTCGGGGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYQAVPK*RVGAEA
Trigger: GGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp CCCTTGAGATCAGACCTGCTTACCTGCTCTCCCACCATCCATGAGTaGCCTATCTTTCTTTTACTCCATGTCTCCCCAAACCTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: PLRSDLLTCSPTIHE*PIFLLLHVSPNLAN
Trigger: GTTTGCCAGGTTTGGGGAGACATGGAGTAAAAGAAAGATAGGCAACTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGATCTCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: VPFLLHTKKYREAGAKERVSYIP*QLLPRA
Trigger: AGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAAC...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGAACAACCACAGGTCATaGGCAGTAGGCTTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLNNHRS*AVGLAV
Trigger: AACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATGCTCCCCCAACCTCCTaGTGCCTGTGCAGAGTGAAG +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYAPPTS*CLCRVK
Trigger: CTTCACTCTGCACAGGCAGCAGGAGGTTGGGGGAGC...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCACACCCCACTGGCTATTaGCCTATACCTGCCAATCAC +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPHPTGY*PIPANH
Trigger: GTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTG...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCCAGCCAGGACACCATaGTCCCTATGGATTACTCTC +
Preference number: 2 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKPARTP*SLWITL
Trigger: GAGAGTAATCCATAGGGACCATGGTGTCCTGGCTGG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCTGCCTAATATATACTaGTGCCTCATGTGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLLPNIY*CLMWAL
Trigger: AAGGGCCCACATGAGGCATCAGTATATATTAGGCAG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAAATTTGAGGCTGCAGTaGGCCATGATCATGCCAGTG +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPNLRLQ*AMIMPV
Trigger: CACTGGCATGATCATGGCTCACTGCAGCCTCAAATT...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGATTCAGCCCTATTGTTaGGTTCAGACTGACCATGAC +
Preference number: 2 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLIQPYC*VQTDHD
Trigger: GTCATGGTCAGTCTGAACTCAACAATAGGGCTGAAT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATGTAATTCTTCACCACTaGTCTCTCCTCACCATGCCC +
Preference number: 2 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNVILHH*SLLTMP
Trigger: GGGCATGGTGAGGAGAGATCAGTGGTGAAGAATTAC...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCGGAGGAAGGTGTGCATaGAAGGATCTTGTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGGGRCA*KDLVLL
Trigger: CAAAAGCACAAGATCCTTGCATGCACACCTTCCTCC...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGGGCATGAACCAGCCTTaGGAACTTATACAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLGMNQP*ELIQSQ
Trigger: CTGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCC...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTACATCTCACTATCTCTaGCATGAACCAGCCTTGCGA +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPTSHYL*HEPALR
Trigger: TCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp GTGAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATaGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTT +
Preference number: 2 (lower is better)
Translates to: VKICCLPHLMGFSAG*RPLALVYTNCLHQL
Trigger: AAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGCTGCTTCAAAAACATaGGGACCCCAAGGGATATTG +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPAASKT*GPQGIL
Trigger: CAATATCCCTTGGGGTCCTCATGTTTTTGAAGCAGC...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGATCAATAACCAGGTGTaGGCTACAGGTCTCTGTGTA +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLINNQV*ATGLCV
Trigger: TACACAGAGACCTGTAGCTCACACCTGGTTATTGAT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCTGCAGGTTGGTAATGTaGCTTTGTAGATATTCCTTG +
Preference number: 2 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPCRLVM*LCRYSL
Trigger: CAAGGAATATCTACAAAGTCACATTACCAACCTGCA...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAATCTCCTGACCTCGTaGTCTGCCCCACCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRNLLTS*SAPPRP
Trigger: AGGCCGAGGTGGGGCAGATCACGAGGTCAGGAGATT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAACATTGCTTCAAAGATaGCCAACCCCCGTAGTAGCA +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPTLLQR*PTPVVA
Trigger: TGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGT...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCATCTCAGCACATAGGGTaGACATCTCACTATCTCTGG +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPSQHIG*TSHYLW
Trigger: CCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGA...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTGCATCTTGGCTCACTaGAAGCTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYCILAH*KLCLLG
Trigger: ACCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATGCA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCACACACACACTCAGTaGCACACTGGGTCAGACCCA +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYHTHTQ*HTGSDP
Trigger: TGGGTCTGACCCAGTGTGGCACTGAGTGTGTGTGTG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGAGTGCTTCTCTCTTATaGAGATCATCCCTGGAATCC +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLSASLL*RSSLES
Trigger: GGATTCCAGGGATGATCTCCATAAGAGAGAAGCACT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp GGCCAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTaGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: GQVETKRSSLQVPFL*HTKKYREAGAKERK
Trigger: TTTTCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp CACATGGTACTGGTGGTAATAGTGGCAGAAATGGCAAAAGAGCCATaGGTTGATAAGGTTCAGGAGGGCCTAGGCTGTTCCTTTGTAAAC +
Preference number: 2 (lower is better)
Translates to: HMVLVVIVAEMAKEP*VDKVQEGLGCSFVN
Trigger: GTTTACAAAGGAACAGCCTAGGCCCTCCTGAACCTTATCAACCAATGGCTCTTTTGCCATTTCTGCCACTATTACCACCAGTACCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp CATTACAGGATTGAACAGAAGAGTTCCCCTTGCATACGTCATCTTTaGGAGCTGCTCTTACTCACTGTCTTGCGCCTAAACAGAGGTCCA +
Preference number: 2 (lower is better)
Translates to: HYRIEQKSSPCIRHL*ELLLLTVLRLNRGP
Trigger: TGGACCTCTGTTTAGGCGCAAGACAGTGAGTAAGAGCAGCTCCAAAAGATGACGTATGCAAGGGGAACTCTTCTGTTCAATCCTGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCCTCATGTGGGCCCTTaGGATCAGACCTGCTTACCT +
Preference number: 2 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYPHVGP*DQTCLP
Trigger: AGGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCACAGTTGACTCCATTCTaGAGGAAGACATTCTCTTGG +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPQLTPF*RKTFSW
Trigger: CCAAGAGAATGTCTTCCTTCAGAATGGAGTCAACTG...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTTCCTTCCACAGGGATaGGAACCAAAAACCAAAGAA +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPFLPQG*EPKTKE
Trigger: TTCTTTGGTTTTTGGTTCTCATCCCTGTGGAAGGAA...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATAAGACATTGCTGATCTaGGGGACAGACCTCTATCAA +
Preference number: 2 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNKTLLI*GTDLYQ
Trigger: TTGATAGAGGTCTGTCCCTCAGATCAGCAATGTCTT...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATAGGGGCTGTTGGGGTTaGAGTCAAGTCACCGCATTT +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYRGCWG*SQVTAF
Trigger: AAATGCGGTGACTTGACTTCAACCCCAACAGCCCCT...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAAGGTACCCTTCCTCTTaGACACCAAGAAGTATCGGG +
Preference number: 2 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRERYPSS*TPRSIG
Trigger: CCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATAAACTGGCTACAGGCTaGGCAGCTGAGGTACTTCAG +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYKLATG*AAEVLQ
Trigger: CTGAAGTACCTCAGCTGCGCAGCCTGTAGCCAGTTT...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCACACCATGGTCCCTATaGATTACTCTCTACATCCTT +
Preference number: 2 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCTPWSL*ITLYIL
Trigger: AAGGATGTAGAGAGTAATCCATAGGGACCATGGTGT...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCAGGTTGACGTCCTATaGAAGGCATATGCCATTATT +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLQVDVL*KAYAII
Trigger: AATAATGGCATATGCCTTCCATAGGACGTCAACCTG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp GAGGCTTTCCCCAGCAGCCTGGCATATAATATAAGGCAGCTTCCTTaGGTAAATTCATTCAGCCCTATTGTTGAGTTCAGACTGACCATG +
Preference number: 2 (lower is better)
Translates to: EAFPSSLAYNIRQLP*VNSFSPIVEFRLTM
Trigger: CATGGTCAGTCTGAACTCAACAATAGGGCTGAATGAATTTACCAAAGGAAGCTGCCTTATATTATATGCCAGGCTGCTGGGGAAAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTAAACATATGAGCATGTaGATGGAACCTTGTCCACTA +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPKHMSM*MEPCPL
Trigger: TAGTGGACAAGGTTCCATTCACATGCTCATATGTTT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAAGATTTAAGTCAGGTTaGCGTCCTATGGAAGGCATA +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPRFKSG*RPMEGI
Trigger: TATGCCTTCCATAGGACGTCAACCTGACTTAAATCT...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCTGCCCTATGACCACTaGGTGCATTTAAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLLPYDH*VHLNKN
Trigger: GTTTTTATTTAAATGCACTCAGTGGTCATAGGGCAG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTAATGCCTCCCAGGGATaGGAAACATACTCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSNASQG*ETYSPW
Trigger: CCAGGGAGAGTATGTTTCTCATCCCTGGGAGGCATT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAGGGTGGAGGAAGGTGTaGATGCAAGGATCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRGWRKV*MQGSCA
Trigger: AGCACAAGATCCTTGCATGCACACCTTCCTCCACCC...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGGGAAATCAGGGAGCTTaGTCAGTTTCTTATATCCCC +
Preference number: 2 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKGNQGA*SVSYIP
Trigger: GGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCC...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATAAGTTAGCTTTTATCTaGAGGGCTAGGTTAAGGCTG +
Preference number: 2 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNKLAFI*RARLRL
Trigger: CAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTT...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCACTTATTCCCTCATCTTaGTTTCCTAACCCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPLIPSS*FPNPGV
Trigger: AACTCCTGGGTTAGGAAAGCAAGATGAGGGAATAAG...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCCAGCCAGGACACCATaGTCCCTATGGATTACTCTC +
Preference number: 2 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSPARTP*SLWITL
Trigger: GAGAGTAATCCATAGGGACCATGGTGTCCTGGCTGG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAAATAAAGCCACCACTTaGTCTTTTCCAGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPNKATT*SFPVLL
Trigger: GAGAAGCACTGGAAAAGACCAAGTGGTGGCTTTATT...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATAATAAAGCCACCACTTaGTCTTTTCCAGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNNKATT*SFPVLL
Trigger: GAGAAGCACTGGAAAAGACCAAGTGGTGGCTTTATT...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHVSYIP*QLLPRA
Trigger: AGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAAC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATAGACCACAAGGGCCCTaGCTAGCTCATGTTTTGTGT +
Preference number: 2 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYRPQGP*LAHVLC
Trigger: ACACAAAACATGAGCTAGTCAGGGCCCTTGTGGTCT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATGGAGGAAGGTGTGCATaGAAGGATCTTGTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYGGRCA*KDLVLL
Trigger: CAAAAGCACAAGATCCTTGCATGCACACCTTCCTCC...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAACTTTGGCCCCAACCTaGAGTACTCCTTCCCACTGT +
Preference number: 2 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRTLAPT*STPSHC
Trigger: ACAGTGGGAAGGAGTACTGCAGGTTGGGGCCAAAGT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGGAGGAAAAATTAATTaGTTGGCCATCATTCCTTTT +
Preference number: 2 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLGGKIN*LAIIPF
Trigger: AAAAGGAATGATGGCCAAGCAATTAATTTTTCCTCC...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAACACCATGGTCCCTATaGATTACTCTCTACATCCTT +
Preference number: 2 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQTPWSL*ITLYIL
Trigger: AAGGATGTAGAGAGTAATCCATAGGGACCATGGTGT...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTAACCTAGTTAGGCAATaGGTAATAGCATTACCCATT +
Preference number: 2 (lower is better)
Translates to: ENLLSASSHGFLCRIETPNLVRQ*VIALPI
Trigger: AATGGGTAATGCTATTACCCATTGCCTAACTAGGTT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATTTTGGAAGGCTGCAGTaGGAGGATTGCTTGAGACCA +
Preference number: 2 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYFGRLQ*EDCLRP
Trigger: TGGTCTCAAGCAATCCTCCCACTGCAGCCTTCCAAA...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATTTGGCAAAGACTTACTaGTTGGTGTTCTTGATAAGG +
Preference number: 2 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNLAKTY*LVFLIR
Trigger: CCTTATCAAGAACACCAACCAGTAAGTCTTTGCCAA...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp TTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTaGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCTGTCCAATAC +
Preference number: 2 (lower is better)
Translates to: FNDLLSMGTTAFHLS*NRQQVSKRGSAVQY
Trigger: GTATTGGACAGCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGGCATCCTCAGGCTTTaGGGAGAATACACAGGATTT +
Preference number: 2 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSGILRL*GEYTGF
Trigger: AAATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCGGAAATCAGGGAGCTTaGTCAGTTTCTTATATCCCC +
Preference number: 2 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLGNQGA*SVSYIP
Trigger: GGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCC...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCTGCAGTGGGAGGATTaGTTGAGACCAAGAATTCAA +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYLQWED*LRPRIQ
Trigger: TTGAATTCTTGGTCTCAAGCAATCCTCCCACTGCAG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCACATTGTTCTCTGGTaGTGTAATTTGGCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAHIVLW*CNLAAG
Trigger: TCCTGCAGCCAAATTACAGCACCAGAGAACAATGTG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCCCAAACCAAAGAGTTaGCTGCAGGTTGGTAATGTG +
Preference number: 2 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSPKPKS*LQVGNV
Trigger: CACATTACCAACCTGCAGGCAACTCTTTGGTTTGGG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTTCTCAGCACATAGGGTaGACATCTCACTATCTCTGG +
Preference number: 2 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSSQHIG*TSHYLW
Trigger: CCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGA...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATAGTGAGGGAACTAAATaGAGCCCTGACTGCACCAAA +
Preference number: 2 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYSEGTK*SPDCTK
Trigger: TTTGGTGCAGTCAGGGCTCCATTTAGTTCCCTCACT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGCTGCTTCAAAAACATaGGGACCCCAAGGGATATTG +
Preference number: 2 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRAASKT*GPQGIL
Trigger: CAATATCCCTTGGGGTCCTCATGTTTTTGAAGCAGC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTAGATTTAAGTCAGGTTaGCGTCCTATGGAAGGCATA +
Preference number: 2 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYARFKSG*RPMEGI
Trigger: TATGCCTTCCATAGGACGTCAACCTGACTTAAATCT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGGAGGAAGGTGTGCATaGAAGGATCTTGTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRGGRCA*KDLVLL
Trigger: CAAAAGCACAAGATCCTTGCATGCACACCTTCCTCC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCTGCGGGCTGGAGTTTaGTGCATAATTAAAACTCAG +
Preference number: 2 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSLRAGV*CIIKTQ
Trigger: CTGAGTTTTAATTATGCACCAAACTCCAGCCCGCAG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCAGGTTGACGTCCTATaGAAGGCATATGCCATTATT +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYQVDVL*KAYAII
Trigger: AATAATGGCATATGCCTTCCATAGGACGTCAACCTG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGACTCTCCCACCATCCATaGGTTGCCTATCTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRLSHHP*VAYLSF
Trigger: AAAAGAAAGATAGGCAACTCATGGATGGTGGGAGAG...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCAGACCACAAGGGCCCTaGCTAGCTCATGTTTTGTGT +
Preference number: 2 (lower is better)
Translates to: TIYRKLQNLHLYELEFGARPQGP*LAHVLC
Trigger: ACACAAAACATGAGCTAGTCAGGGCCCTTGTGGTCT...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR TCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTGCAGGTTGGTAATGTaGCTTTGTAGATATTCCTTG +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYCRLVM*LCRYSL
Trigger: CAAGGAATATCTACAAAGTCACATTACCAACCTGCA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTGCTTGCCTTGCATTTaGACATCCAGAATGACTAAA +
Preference number: 2 (lower is better)
Translates to: VAHFSELVTPTGISRNCYCLPCI*TSRMTK
Trigger: TTTAGTCATTCTGGATGTGCAAATGCAAGGCAAGCA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTACACCATGGTCCCTATaGATTACTCTCTACATCCTT +
Preference number: 2 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSTPWSL*ITLYIL
Trigger: AAGGATGTAGAGAGTAATCCATAGGGACCATGGTGT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGACCCCAAGGGATATTaGAGAGGAACTTTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRDPKGY*RGTLER
Trigger: TCTTTCCAAAGTTCCTCTCCAATATCCCTTGGGGTC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp ACTACATTAATCTATCCTAGGAGTGTTCTAGGGTGTTTTAATGATTaGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGG +
Preference number: 2 (lower is better)
Translates to: TTLIYPRSVLGCFND*LSMGTTAFHLSLNR
Trigger: CCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACTCCTAGGATAGATTAATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATTGGCAAAGACTTACTaGTTGGTGTTCTTGATAAGG +
Preference number: 2 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRLAKTY*LVFLIR
Trigger: CCTTATCAAGAACACCAACCAGTAAGTCTTTGCCAA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp AGAAATGAAGCAGTGAGTGTTCAGAAATTAGATCTACAAGAAGTTTaGCAAACAGACCCTCAGGGCCAGGCAATGTTTGTTTTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: RNEAVSVQKLDLQEV*QTDPQGQAMFVFVF
Trigger: AAAAACAAAAACAAACATTGCCTGGCCCTGAGGGTCTGTTTGCAAAACTTCTTGTAGATCTAATTTCTGAACACTCACTGCTTCATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp CCTGTATCCAGAATTCTTTATGCAGGCTCCTTAATCTACAGACTTTaGTTAATACTTTATAGTCCTAAAGAAGGACTGTTCCTAGAGAAG +
Preference number: 2 (lower is better)
Translates to: PVSRILYAGSLIYRL*LILYSPKEGLFLEK
Trigger: CTTCTCTAGGAACAGTCCTTCTTTAGGACTATAAAGTATTAACAAAAGTCTGTAGATTAAGGAGCCTGCATAAAGAATTCTGGATACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 90 bp TCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTCTTaGCCTAGGTTAACAAAATACACATCTCCAGATAGTAAGTTAGTT +
Preference number: 2 (lower is better)
Translates to: SELVTPTGISRNCYS*PRLTKYTSPDSKLV
Trigger: AACTAACTTACTATCTGGAGATGTGTATTTTGTTAACCTAGGCAAAGAATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp CTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTaGCCAGGAATGCATCACATTGTTCTCTGGTGCTGT +
Preference number: 3 (lower is better)
Translates to: LHKAQAPRVPPT*PGMHHIVLWCC
Trigger: ACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp CGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTaGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: RLCRIAYGELCV*HLSPQGPGAQG
Trigger: ACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp CCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATaGATCACATTGTTCTCTGGTGCTGTAATTTGGCTG +
Preference number: 3 (lower is better)
Translates to: PRRPGSHRPAQE*ITLFSGAVIWL
Trigger: CAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGTGTACGCCCAGCACTTaGGAAGGCTGCAGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLCTPST*EGCSGR
Trigger: CCTCCCACTGCAGCCTTCCAAAGTGCTGGGCGTACA...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp CAAATTGCTTGCATCAGCTTGAGATCCCAGGACCTTTaGCAGGCCACGGGTAGGCATCTGTCTGGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: QIACISLRSQDL*QATGRHLSGLG
Trigger: TCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp GTTTTGAAGGTGCTGGGACTCTGGTGCCCCCAACCCTaGGCATCCTCAGGCTTTGAGGAGAATACACAGGAT +
Preference number: 3 (lower is better)
Translates to: VLKVLGLWCPQP*ASSGFEENTQD
Trigger: ATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCCCAGGGTTGGGGGCACCAGAGTCCCAGCACCTTCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp TGCCAGGCCACGGGTAGGCATCTGTCTGGCTTGGGATaGGAGTTTCTTAGGACACTTATTCCCTCATCTTGC +
Preference number: 3 (lower is better)
Translates to: CQATGRHLSGLG*EFLRTLIPSSC
Trigger: GCAAGATGAGGGAATAAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp GGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCTAAGGAACCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: GNQGACSVSYIP*QLLPRAKEPAR
Trigger: CCTGGCTGGTTCCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp GTTGACTCCATTCTGAAGGAAGACATTCTCTTGGCCTaGCTCACTCAGGCCCATTTCTCCACAGGCATCCCC +
Preference number: 3 (lower is better)
Translates to: VDSILKEDILLA*LTQAHFSTGIP
Trigger: GGGGATGCCTGTGGAGAAATGGGCCTGAGTGAGTCAGGCCAAGAGAATGTCTTCCTTCAGAATGGAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp GGAGGTGAGCAATGGAATTCTTTAGATGATGACTTCTaGGCCCACATGCAGAGGCAGTTGGGGGTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: GGEQWNSLDDDF*AHMQRQLGVGS
Trigger: GCTTCCCACCCCCAACTGCCTCTGCATGTGGGCTCAGAAGTCATCATCTAAAGAATTCCATTGCTCACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp GTTGGCCTCCACCTCAGCATGTGTGTGGCAGCCTGCTaGATAGATCCCTACAATTGGGAAGGAGTTAACCCT +
Preference number: 3 (lower is better)
Translates to: VGLHLSMCVAAC*IDPYNWEGVNP
Trigger: AGGGTTAACTCCTTCCCAATTGTAGGGATCTATTCAGCAGGCTGCCACACACATGCTGAGGTGGAGGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp GCCTCATGTGGGCCCTTGAGATCAGACCTGCTTACCTaGTCTCCCACCATCCATGAGTTGCCTATCTTTCTT +
Preference number: 3 (lower is better)
Translates to: ASCGPLRSDLLT*SPTIHELPIFL
Trigger: AAGAAAGATAGGCAACTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp CCTGCAGTACTCCTTCCCACTGTAGCCACTGACTCCTaGTCCCAGCTTCAAAGGCTAGGATCCTCTCATAAA +
Preference number: 3 (lower is better)
Translates to: PAVLLPTVATDS*SQLQRLGSSHK
Trigger: TTTATGAGAGGATCCTAGCCTTTGAAGCTGGGAGCAGGAGTCAGTGGCTACAGTGGGAAGGAGTACTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp GGTTCAGGAGGGCCTAGGCTGTTCCTTTGTAAACTGTaGTCAGATATACTCTCTTGGCTGTCCTGGGACTCC +
Preference number: 3 (lower is better)
Translates to: GSGGPRLFLCKL*SDILSWLSWDS
Trigger: GGAGTCCCAGGACAGCCAAGAGAGTATATCTGAGCACAGTTTACAAAGGAACAGCCTAGGCCCTCCTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp CCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTaGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAAT +
Preference number: 3 (lower is better)
Translates to: PPTCPGMHHIVL*CCNLAAGARLN
Trigger: ATTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp ACCTTTGCCAGGCCACGGGTAGGCATCTGTCTGGCTTaGGATGGGAGTTTCTTAGGACACTTATTCCCTCAT +
Preference number: 3 (lower is better)
Translates to: TFARPRVGICLA*DGSFLGHLFPH
Trigger: ATGAGGGAATAAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCAAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGCCTCATGTGGGCCCTaGAGATCAGACCTGCTTACC +
Preference number: 3 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPASCGP*RSDLLT
Trigger: GGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGGC...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCTGGCCATCATTCCTTTaGGGACCACATAACCTCCGT +
Preference number: 3 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPWPSFL*GPHNLR
Trigger: ACGGAGGTTATGTGGTCCCAAAAGGAATGATGGCCA...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCATTCGCCCCAGCTAGCTaGAGCTTCTGCCCTATGACC +
Preference number: 3 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPFAPAS*SFCPMT
Trigger: GGTCATAGGGCAGAAGCTCAAGCTAGCTGGGGCGAA...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCAGGTACCCTTCCTCTaGCACACCAAGAAGTATCGG +
Preference number: 3 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCQVPFL*HTKKYR
Trigger: CCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGGACCCCAAGGGATATaGGAGAGGAACTTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLGPQGI*ERNFGK
Trigger: CTTTCCAAAGTTCCTCTCCAATATCCCTTGGGGTCC...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCCAGTGGGAGAATGCTaGCCTTGCATTTGCACATCC +
Preference number: 3 (lower is better)
Translates to: ENLLSASSHGFLCRIETPPVGEC*PCICTS
Trigger: GGATGTGCAAATGCAAGGCAAGCATTCTCCCACTGG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp TTCTCTGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTaGATGCCTCCCAGGGATGAGAAACATACTCTCCCT +
Preference number: 3 (lower is better)
Translates to: FSGAVIWLQELG*MPPRDEKHTLP
Trigger: AGGGAGAGTATGTTTCTCATCCCTGGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp CTCAGCCACTCTGCTTTGATGGTAATTCTTCACCACTaGTCTCTCCTCACCATGCCCTTCCTGCATCCTTCC +
Preference number: 3 (lower is better)
Translates to: LSHSALMVILHH*SLLTMPFLHPS
Trigger: GGAAGGATGCAGGAAGGGCATGGTGAGGAGAGATCAGTGGTGAAGAATTACCATCAAAGCAGAGTGGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp CCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTaGCACCCCACTGGCTATTGCCCTATACCTGCCAAT +
Preference number: 3 (lower is better)
Translates to: PFTFEVRDRAYY*HPTGYCPIPAN
Trigger: ATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp CAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATaGAGTCATAGGAGACTGCTCCATCATTCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: QVMSSRLGSYTP*SHRRLLHHSQH
Trigger: GTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp ACCAAAGCCAGAGATCCCTACCTGCCTAATATATACTaGTGCCTCATGTGGGCCCTTGAGATCAGACCTGCT +
Preference number: 3 (lower is better)
Translates to: TKARDPYLPNIY*CLMWALEIRPA
Trigger: AGCAGGTCTGATCTCAAGGGCCCACATGAGGCATCAGTATATATTAGGCAGGTAGGGATCTCTGGCTTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp ATGGAAGAGAGGAGAGGGGCTAAGACATTGCTGATCTaGGGGACAGACCTCTATCAAATAGAAGAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: MEERRGAKTLLI*GTDLYQIEEGW
Trigger: CCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAATGTCTTAGCCCCTCTCCTCTCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGTCTTGTGCTTTTGAGTaGAGAGGCTTGAATTGGAGG +
Preference number: 3 (lower is better)
Translates to: RELAQFLISPDNSFPGLRSCAFE*RGLNWR
Trigger: CCTCCAATTCAAGCCTCTCAACTCAAAAGCACAAGA...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp TATAGTCCTAAAGAAGGACTGTTCCTAGAGAAGTCATaGTGGGCTAGACCAGCCAGGGGCTTTGGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: YSPKEGLFLEKS*WARPARGFGEE
Trigger: CTCTTCACCAAAGCCCCTGGCTGGTCTAGCCCATCATGACTTCTCTAGGAACAGTCCTTCTTTAGGACTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp GCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATaGCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG +
Preference number: 3 (lower is better)
Translates to: ASLSCYPTLLQR*PTPVVAGSSQV
Trigger: CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGATAACAAGAAAGAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp AAGCTGCTGTCATCAGCAGCTCATTCAACACTCTCCTaGTCTGCCTCTTTTCCAGGAGTCAGGGTTAGTTTA +
Preference number: 3 (lower is better)
Translates to: KLLSSAAHSTLS*SASFPGVRVSL
Trigger: TAAACTAACCCTGACTCCTGGAAAAGAGGCAGAGCAGGAGAGTGTTGAATGAGCTGCTGATGACAGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTATAGGACATCAAGTTTaGGGGGACTTCATGTCCTAC +
Preference number: 3 (lower is better)
Translates to: ENLLSASSHGFLCRIETPIGHQV*GDFMSY
Trigger: GTAGGACATGAAGTCCCCCAAAACTTGATGTCCTAT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCTCTGGTGCTGTAATTaGGCTGCAGGAGCTAGGCTG +
Preference number: 3 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYALWCCN*AAGARL
Trigger: CAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTGTATCAATTTCTGTTTaGAAGGTGCTGGGACTCTGG +
Preference number: 3 (lower is better)
Translates to: ENLLSASSHGFLCRIETPVSISV*KVLGLW
Trigger: CCAGAGTCCCAGCACCTTCAAAACAGAAATTGATAC...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCAGACTAAATGCCAGTaGTGTAAAGCCAATCAATGC +
Preference number: 3 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLQTKCQ*CKANQC
Trigger: GCATTGATTGGCTTTACACAACTGGCATTTAGTCTG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCCAGTGGGAGAATGCTaGCCTTGCATTTGCACATCC +
Preference number: 3 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAPVGEC*PCICTS
Trigger: GGATGTGCAAATGCAAGGCAAGCATTCTCCCACTGG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp GCAGCTTCCTTTGGTAAATTCATTCAGCCCTATTGTTaGGTTCAGACTGACCATGACCCCCTTACCTCTCCA +
Preference number: 3 (lower is better)
Translates to: AASFGKFIQPYC*VQTDHDPLTSP
Trigger: TGGAGAGGTAAGGGGGTCATGGTCAGTCTGAACTCAACAATAGGGCTGAATGAATTTACCAAAGGAAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp AAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTaGACACCAAGAAGTATCGGGAAGCTGGTGCAAAGG +
Preference number: 3 (lower is better)
Translates to: KQKEALYRYPSS*TPRSIGKLVQR
Trigger: CCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp CATTCTCAGCACATAGGGTGCACATCTCACTATCTCTaGCATGAACCAGCCTTGCGAACTTATACAGTCTCA +
Preference number: 3 (lower is better)
Translates to: HSQHIGCTSHYL*HEPALRTYTVS
Trigger: TGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTATCTTGTGCTTTTGAGTaGAGAGGCTTGAATTGGAGG +
Preference number: 3 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVSCAFE*RGLNWR
Trigger: CCTCCAATTCAAGCCTCTCAACTCAAAAGCACAAGA...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCACAGGAATGCATCACATaGTTCTCTGGTGCTGTAATT +
Preference number: 3 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPQECIT*FSGAVI
Trigger: AATTACAGCACCAGAGAACAATGTGATGCATTCCTG...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp GTTAAGCCATGTAGAGACTCGTGTCCTGAGTGGGTCTaGGAATTTGGCAAAGACTTACTGGTTGGTGTTCTT +
Preference number: 3 (lower is better)
Translates to: VKPCRDSCPEWV*EFGKDLLVGVL
Trigger: AAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGTCTCTACATGGCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp CTAACCCAGTTAAGAGTTAAAAACAACCACAGGTCATaGGCAGTAGGCTTGGCAGTTATACCCCATGCAGTC +
Preference number: 3 (lower is better)
Translates to: LTQLRVKNNHRS*AVGLAVIPHAV
Trigger: GACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTAACTCTTAACTGGGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp AGGTTTGAGTTCTGGCTGAGCCACGCACTGTTCATGTaGCCTTGGACAAATCACCAAATTTTTCTGAACAGC +
Preference number: 3 (lower is better)
Translates to: RFEFWLSHALFM*PWTNHQIFLNS
Trigger: GCTGTTCAGAAAAATTTGGTGATTTGTCCAAGGTCACATGAACAGTGCGTGGCTCAGCCAGAACTCAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATGGGTGTTTTAATGATTaGTTAAGCATGGGAACCACT +
Preference number: 3 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNGCFND*LSMGTT
Trigger: AGTGGTTCCCATGCTTAACAAATCATTAAAACACCC...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp TCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTaGCTTTGTAGATATTCCTTGATTAAAGCCAGACCC +
Preference number: 3 (lower is better)
Translates to: SPNQRVACRLVM*LCRYSLIKARP
Trigger: GGGTCTGGCTTTAATCAAGGAATATCTACAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp CAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTaGTGTCCAATACAGGTTGAGAATGGTAGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: QFEQAASKQKRQ*CPIQVENGREK
Trigger: TTTCTCTCTACCATTCTCAACCTGTATTGGACAGCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp TCTCATAAAGAATTACCAAAGCCAGAGATCCCTACCTaGCTAATATATACTGATGCCTCATGTGGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: SHKELPKPEIPT*LIYTDASCGPL
Trigger: CAAGGGCCCACATGAGGCATCAGTATATATTAGGCAGGTAGGGATCTCTGGCTTTGGTAATTCTTTATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp ACAAACACACAAACACACACACACTCAGTGCCACACTaGGTCAGACCCATAGTTCAATACTCTGTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: TNTQTHTHSVPH*VRPIVQYSVSE
Trigger: TTCAGAAACAGAGTATTGAACTATGGGTCTGACCCAGTGTGGCACTGAGTGTGTGTGTGTTTGTGTGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGGGAAATCAGGGAGCTaGCTCAGTTTCTTATATCCC +
Preference number: 3 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHGKSGS*LSFLYP
Trigger: GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCTCAGCCACTCTGCTTaGATGGTAATTCTTCACCAC +
Preference number: 3 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSLSHSA*MVILHH
Trigger: GTGGTGAAGAATTACCATCAAAGCAGAGTGGCTGAG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATACAGAGGTCCAGATTTaGGATGGGAAAACAAAGAGG +
Preference number: 3 (lower is better)
Translates to: VAHFSELVTPTGISRNCYTEVQI*DGKTKR
Trigger: CCTCTTTGTTTTCCCATCCAAAATCTGGACCTCTGT...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp TCTGGAGATTCCACTACTGCAAACCTAGTTAGGCAATaGGTAATAGCATTACCCATTAAGCCAAATGTGGAG +
Preference number: 3 (lower is better)
Translates to: SGDSTTANLVRQ*VIALPIKPNVE
Trigger: CTCCACATTTGGCTTAATGGGTAATGCTATTACCCATTGCCTAACTAGGTTTGCAGTAGTGGAATCTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CCA 72 bp TCTTTTCCAGTGCTTCTCTCTTATGGAGATCATCCCTaGAATCCAAAGCTCTCCAGTTTTCTAACCCAGTTA +
Preference number: 3 (lower is better)
Translates to: SFPVLLSYGDHP*NPKLSSFLTQL
Trigger: TAACTGGGTTAGAAAACTGGAGAGCTTTGGATTCCAGGGATGATCTCCATAAGAGAGAAGCACTGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp GGATGGGAGTTTCTTAGGACACTTATTCCCTCATCTTaGTTTCCTAACCCAGGAGTTGACGTCATTTTTAAA +
Preference number: 3 (lower is better)
Translates to: GWEFLRTLIPSS*FPNPGVDVIFK
Trigger: TTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAATAAGTGTCCTAAGAAACTCCCATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp ATTAGTGAGCTGGTTTTGCAGTCTCTAAAGCTCTTTTaGAGCTCTTCTATTCACTATGGCCTCAGATACGAT +
Preference number: 3 (lower is better)
Translates to: ISELVLQSLKLF*SSSIHYGLRYD
Trigger: ATCGTATCTGAGGCCATAGTGAATAGAAGAGCTGCAAAAGAGCTTTAGAGACTGCAAAACCAGCTCACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATCTTGTGCTTTTGAGTaGAGAGGCTTGAATTGGAGG +
Preference number: 3 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRSCAFE*RGLNWR
Trigger: CCTCCAATTCAAGCCTCTCAACTCAAAAGCACAAGA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR-3UTR CAA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCGGGAAATCAGGGAGCTaGCTCAGTTTCTTATATCCC +
Preference number: 3 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAGKSGS*LSFLYP
Trigger: GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCC...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR TCA 72 bp ACCTTGCTCAAAATATCAAAGCAAATGGCACAGCTGTaGTTTTTAACCCGGGTCTGTCATAACCGCAAATTT +
Preference number: 3 (lower is better)
Translates to: TLLKISKQMAQL*FLTRVCHNRKF
Trigger: AAATTTGCGGTTATGACAGACCCGGGTTAAAAATCACAGCTGTGCCATTTGCTTTGATATTTTGAGCAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp TTTGGAAAGACAGGGGCCTGTATCCAGAATTCTTTATaGAGGCTCCTTAATCTACAGACTTTTGTTAATACT +
Preference number: 3 (lower is better)
Translates to: FGKTGACIQNSL*RLLNLQTFVNT
Trigger: AGTATTAACAAAAGTCTGTAGATTAAGGAGCCTGCATAAAGAATTCTGGATACAGGCCCCTGTCTTTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR GCA 72 bp CTTAACCAGTTATACAAGTTGAGACTTCTGTCTCTATaGCTATCTTATAATAGCTTCTCTGGGAGAACAGAT +
Preference number: 3 (lower is better)
Translates to: LNQLYKLRLLSL*LSYNSFSGRTD
Trigger: ATCTGTTCTCCCAGAGAAGCTATTATAAGATAGGCATAGAGACAGAAGTCTCAACTTGTATAACTGGTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGAAGGTGCTGGGACTCTaGTGCCCCCAACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGKVLGL*CPQPWA
Trigger: TGCCCAGGGTTGGGGGCACCAGAGTCCCAGCACCTT...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGCGCCCACTGAACGCATaGTGTCTGGGTAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGRPLNA*CLGNAG
Trigger: GCCAGCGTTACCCAGACATCATGCGTTCAGTGGGCG...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGACCTGCATGTTCTTGTaGGAACAGGGGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGTCMFL*EQGLAR
Trigger: CCTGGCCAGCCCCTGTTCTCACAAGAACATGCAGGT...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGGGTCTGGGGCGCGCTaGCTGAGGACCGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLGSGAR*LRTGCG
Trigger: ACCGCACCCGGTCCTCAGGCAGCGCGCCCCAGACCC...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR GCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCCGGTGTCAGGGGGTCTaGGGCGCTGAAGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPRCQGV*GAEGSC
Trigger: GCAGCTCCCTTCAGCGCCGCAGACCCCCTGACACCG...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR GCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCTGCCTGAGGACCGGGTaGGGTGTCAGGGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPCLRTG*GVRGSA
Trigger: CGCAGACCCCCTGACACCGCACCCGGTCCTCAGGCA...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR TCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGCTCGGCCACAGCACATaGTTTCACAACCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGLGHST*FHNRLF
Trigger: GAACAGACGGTTGTGAAATCATGTGCTGTGGCCGAG...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGCTGTGTGTTCAGGTTTaGTCCAGCCACTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGLCVQV*SSHSAF
Trigger: GAAGGCAGAGTGGCTGGACCAAACCTGAACACACAG...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGCCAGCCAGGACACCATaGTCCCTATGGATTACTCTC +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGPARTP*SLWITL
Trigger: GAGAGTAATCCATAGGGACCATGGTGTCCTGGCTGG...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGGGCAGTTATACCCCATaGAGTCATAGGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGGSYTP*SHRRLL
Trigger: GAGCAGTCTCCTATGACTGCATGGGGTATAACTGCC...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGCCGAACCCGGGGTCTaGGGCGCGCTGCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVAEPGV*GALPED
Trigger: GTCCTCAGGCAGCGCGCCCCAGACCCCGGGTTCGGC...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR TCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGAGCCAGGGGCTTTGGTaGAGAGGATCTGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRSQGLW*RGSAGW
Trigger: CCAGCCCGCAGATCCTCTTCACCAAAGCCCCTGGCT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCCTGCAGGAGCTAGGCTaGATGCCTCCCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGLQELG*MPPRDE
Trigger: CTCATCCCTGGGAGGCATTCAGCCTAGCTCCTGCAG...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTATTTCTGCATTCCTTaGACCGTACAGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGYFCIP*TVQHST
Trigger: GGTGCTGTGCTGTACGGTGCAAGGAATGCAGAAATA...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCGCCGAAGCGGGAGCTaGGCAGCTTCCTCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPRRSGS*AASSAP
Trigger: TGGTGCGGAGGAAGCTGCGCAGCTCCCGCTTCGGCG...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR CCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCTGGTGCCCCCAACCCTaGGCATCCTCAGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPWCPQP*ASSGFE
Trigger: CTCAAAGCCTGAGGATGCCCAGGGTTGGGGGCACCA...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGGACCTAGGATCACCTaGGGTCCAGAGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKGPRIT*GPEPGR
Trigger: CCTCCCGGGCTCTGGACCCCAGGTGATCCTAGGTCC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR CCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGGACGGGGCACCTTCTaGGGGTACTCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKGRGTF*GYSGCS
Trigger: GGAGCAGCCTGAGTACCCCCAGAAGGTGCCCCGTCC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR TCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGGGCACCCTCGCCCACTaGACGCATGATGTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRGTLAH*THDVWV
Trigger: TACCCAGACATCATGCGTTCAGTGGGCGAGGGTGCC...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGCCAGAGATCCCTACCTaGCTAATATATACTGATGCC +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGPEIPT*LIYTDA
Trigger: GGCATCAGTATATATTAGGCAGGTAGGGATCTCTGG...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGCTGCAGTGGGAGGATTaGTTGAGACCAAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGLQWED*LRPRIQ
Trigger: TTGAATTCTTGGTCTCAAGCAATCCTCCCACTGCAG...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGACCTGACCTCGTGATCTaGCCCACCTCGGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERPDLVI*PTSASQ
Trigger: TTGGGAGGCCGAGGTGGGGCAGATCACGAGGTCAGG...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGAGAGGGGCGCAAGTTaGGATGTCCGGAAGCCGACG +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCERGAS*DVRKPT
Trigger: CGTCGGCTTCCGGACATCGCAACTTGCGCCCCTCTC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR CCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCATAAATCTGCCCCCGTaGCCCAGAGCTATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPINLPP*PRAMAP
Trigger: GGGAGCCATAGCTCTGGGCCACGGGGGCAGATTTAT...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATaGTTCTCTGGTGCTGTAATTTGGCTGCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PGSHRPAQECIT*FSGAVIWLQEL
Trigger: TAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTaGAGATCCCAGGACCTTTGCCAGGCCACGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PLPWCTQIACIS*RSQDLCQATGR
Trigger: CCTACCCGTGGCCTGGCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAGGCACCCTCGCCCACTaGACGCATGATGTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERGTLAH*THDVWV
Trigger: TACCCAGACATCATGCGTTCAGTGGGCGAGGGTGCC...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTTGGCGGGCTGCGGTaGAGTTGGCACCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKLGGLR*SWHHLG
Trigger: CCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTCTTGGCGGGCTGCGGTaGAGTTGGCACCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSLGGLR*SWHHLG
Trigger: CCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAG...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTTCCTTCCACAGGGATaGGAACCAAAAACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGFLPQG*EPKTKE
Trigger: TTCTTTGGTTTTTGGTTCTCATCCCTGTGGAAGGAA...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCGTCACAGATCACTCGTaGCCCCAGTGCCCCAATGTA +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPVTDHS*PQCPNV
Trigger: TACATTGGGGCACTGGGGGCACGAGTGATCTGTGAC...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGACCGCCGCACAGCCGTaGGACCACAGCGGTTATTAT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRTAAQP*DHSGYY
Trigger: ATAATAACCGCTGTGGTCGCACGGCTGTGCGGCGGT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGTGCACGCCAGCAGGTaGGCAGAGTACAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKVHASR*AEYRNH
Trigger: GTGGTTCCTGTACTCTGCGCACCTGCTGGCGTGCAC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCCCAGGGGGCGGCTCTaGAGGATTGCTTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLPRGRL*RIAYGE
Trigger: TTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGAGATCCCAGGACCTTTaGCAGGCCACGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRRSQDL*QATGRH
Trigger: ATGCCTACCCGTGGCCTGGCAAAGGTCCTGGGATCT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGGATCAAGTGAAAATCTaGTGTCTGCCTCATCTCATG +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGDQVKI*CLPHLM
Trigger: CATGAGATGAGGCAGACAGCAGATTTTCACTTGATC...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCCTCATGGGGCTGTGCTaGTATGCAGGAGGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPLMGLC*YAGGEQ
Trigger: TTGCTCACCTCCTGCATAGCAGCACAGCCCCATGAG...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAAGCCGACGACGGCGTaGCGAACCCGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLKPTTA*RTRGLG
Trigger: CCCCAGACCCCGGGTTCGGCACGCCGTCGTCGGCTT...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR GCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCCACTCGTGCCCCCAGTaGCCCAATGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGHSCPQ*PNVPPG
Trigger: TCCTGGTGGTACATTGGGGCACTGGGGGCACGAGTG...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR CCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTCGGCCAAAGACGGTGTaGTCCCGGTCCAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSRPKTV*SRSRVV
Trigger: TACCACCCTGGACCGGGACCACACCGTCTTTGGCCG...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCACGGCCAAAGACGGTGTaGTCCCGGTCCAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPRPKTV*SRSRVV
Trigger: TACCACCCTGGACCGGGACCACACCGTCTTTGGCCG...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCTCAAAGTCCCCACGCTaGTCATGGTGTCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCSKSPR*SWCRPR
Trigger: CCGTGGCCGACACCATGACCAGCGTGGGGACTTTGA...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGACAAGATCAGTCCGGGTaGCACGGCGATAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERQDQSG*HGDSLG
Trigger: GCCAAGGCTATCGCCGTGCCACCCGGACTGATCTTG...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCAAGATCAGTCCGGGTaGCACGGCGATAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPQDQSG*HGDSLG
Trigger: GCCAAGGCTATCGCCGTGCCACCCGGACTGATCTTG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTGACAGCTGGGCACAGTaGCTTGCGCTTGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPDSWAQ*LALVRP
Trigger: TGGGCGTACAAGCGCAAGCCACTGTGCCCAGCTGTC...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCACGTGGCCCAGAGCTATaGCTCCCCCAACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPRGPEL*LPQPPA
Trigger: AGCAGGAGGTTGGGGGAGCCATAGCTCTGGGCCACG...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCAGCCCGGAGGGGCGTaGACGGGGCACCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSQPGGA*TGHLLG
Trigger: CCCCAGAAGGTGCCCCGTCCACGCCCCTCCGGGCTG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369684.5
3UTR CAA 72 bp GACCTTTGCCAGGCCACGGGTAGGCATCTGTCTGGCTaGGGATGGGAGTTTCTTAGGACACTTATTCCCTCA +
Preference number: 4 (lower is better)
Translates to: DLCQATGRHLSG*GWEFLRTLIPS
Trigger: TGAGGGAATAAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCTACCCGTGGCCTGGCAAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp GTTACATTCCTAAAGAAGCAGCGCATGTGTTCAGGGTaGGCCTCCACCTCAGCATGTGTGTGGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VTFLKKQRMCSG*ASTSACVWQPA
Trigger: AGCAGGCTGCCACACACATGCTGAGGTGGAGGCCAACCCTGAACACATGCGCTGCTTCTTTAGGAATGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAAGCCAGGGGCTTTGGTaGAGAGGATCTGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLISQGLW*RGSAGW
Trigger: CCAGCCCGCAGATCCTCTTCACCAAAGCCCCTGGCT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGATGGTCTCAATCTCCTaGCCTCGTGATCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLMVSIS*PRDLPH
Trigger: GTGGGGCAGATCACGAGGTCAGGAGATTGAGACCAT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGACTGGGGCGCGCTGCCTaGGGACCGGGTGCGGTGTCA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRLGRAA*GPGAVS
Trigger: TGACACCGCACCCGGTCCTCAGGCAGCGCGCCCCAG...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCACCGCCGCACAGCCGTaGGACCACAGCGGTTATTAT +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCTAAQP*DHSGYY
Trigger: ATAATAACCGCTGTGGTCGCACGGCTGTGCGGCGGT...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGTGCACGCCAGCAGGTaGGCAGAGTACAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSVHASR*AEYRNH
Trigger: GTGGTTCCTGTACTCTGCGCACCTGCTGGCGTGCAC...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAATAGCCTTGGCGGGCTaGGGTGAAGTTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKIALAG*GEVGTI
Trigger: GATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTAT...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGTTGGTCCAGCCACTCTaGCTTCTTGGGGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLLVQPL*LLGGFA
Trigger: TGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAA...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCGCCACTCTGCCTTCTTaGGGGCTTTGCAAGTATGGA +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGATLPS*GLCKYG
Trigger: TCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGC...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAATCAGCGTCTGACAGCTaGGCACAGTGGCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKSASDS*AQWLAL
Trigger: AAGCGCAAGCCACTGTGCCCAGCTGTCAGACGCTGA...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTTGGCAAAGACTTACTaGTTGGTGTTCTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGLAKTY*LVFLIR
Trigger: CCTTATCAAGAACACCAACCAGTAAGTCTTTGCCAA...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGGAAACATACTCTCCCTaGCGTCCTCCCTTCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLETYSP*RPPFAP
Trigger: TGGGGCGAAGGGAGGACGCCAGGGAGAGTATGTTTC...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCACCTCCATCTGGTGTGTaGCCTCATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPPPSGV*PHGAVL
Trigger: CAGCACAGCCCCATGAGGCCACACACCAGATGGAGG...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTaGGCTGCAGGAGCTAGGCTGAATGCCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PGMHHIVLWCCN*AAGARLNASQG
Trigger: TCCCTGGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTACGCCCACTGAACGCATaGTGTCTGGGTAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVRPLNA*CLGNAG
Trigger: GCCAGCGTTACCCAGACATCATGCGTTCAGTGGGCG...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATGTGCGGCGGAAATCTaGGAGTGCACGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQCAAEI*ECTPAG
Trigger: ACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGTGTGCGGCGGAAATCTaGGAGTGCACGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKCAAEI*ECTPAG
Trigger: ACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACA...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTATGTGCGGCGGAAATCTaGGAGTGCACGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVCAAEI*ECTPAG
Trigger: ACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACA...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAACCTCATGTGGGCCCTTaGGATCAGACCTGCTTACCT +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKPHVGP*DQTCLP
Trigger: AGGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGG...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCGCTGCCTGTGCAGAGTaGAGCTGCTTCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGAACAE*SCFKNM
Trigger: CATGTTTTTGAAGCAGCTTCACTCTGCACAGGCAGC...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGAGGGGCTGTTGGGGTTaGAGTCAAGTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLRGCWG*SQVTAF
Trigger: AAATGCGGTGACTTGACTTCAACCCCAACAGCCCCT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGAGTAAGTTAGTTGCATaGTGGCATCTTCTAATTCAG +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGSKLVA*WHLLIQ
Trigger: CTGAATTAGAAGATGCCATCATGCAACTAACTTACT...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGTGTCGCTCACTTCTCTaGGCTTGTCACACCTACTGG +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLCRSLL*ACHTYW
Trigger: CCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGACA...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGAGGGCACAAATTCTTTaGCTGGGCAGACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRRAQIL*LGRPCP
Trigger: AGGGCATGGTCTGCCCAGGCAAAGAATTTGTGCCCT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCAGACACGGCCTGCAGTaGCTAGGGAACCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIRHGLQ*LGNLQP
Trigger: AGGCTGCAGGTTCCCTAGGCACTGCAGGCCGTGTCT...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCTTCCTTTTGATGTCTTaGTGCAGACACGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGFLLMS*CRHGLQ
Trigger: CTGCAGGCCGTGTCTGCAGCAAGACATCAAAAGGAA...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGCGGCTCTGCAGGATTaGTTACGGAGAACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLAALQD*LRRTLC
Trigger: ACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGC...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCCCGTATTTCATTTCTaGACCCAGGGGGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNPVFHF*TQGAAL
Trigger: CAGAGCCGCCCCCTGGGTGCAGAAATGAAATACGGG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCGTGCTGGGACTCTGGTaGCCCCAACCCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFVLGLW*PQPWAS
Trigger: GGATGCCCAGGGTTGGGGGCACCAGAGTCCCAGCAC...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTTTCACGCCATTCTCCTaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSFTPFS*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAA...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTTCTCCCAGGCTGGAGTaGAGTGGTGCATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSSPRLE*SGASWL
Trigger: GAGCCAAGATGCACCACTGCACTCCAGCCTGGGAGA...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCAACACTCTCCTGCTCTaGCTCTTTTCCAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGNTLLL*LFSRSQ
Trigger: CTGACTCCTGGAAAAGAGGCAGAGCAGGAGAGTGTT...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCACACACACACTCAGTaGCACACTGGGTCAGACCCA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLHTHTQ*HTGSDP
Trigger: TGGGTCTGACCCAGTGTGGCACTGAGTGTGTGTGTG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCAAACACGGTGCCTGCTaGCAACTTGGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGKHGAC*QLGALY
Trigger: ATACAGTGCACCAAGTTGCCAGCAGGCACCGTGTTT...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCGCGCGAGTAATAGCGTaGACTACCCCTGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGARVIA*TTPADE
Trigger: CTCATCAGCAGGGGTAGTCCACGCTATTACTCGCGC...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGGCGCGAGTAATAGCGTaGACTACCCCTGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLARVIA*TTPADE
Trigger: CTCATCAGCAGGGGTAGTCCACGCTATTACTCGCGC...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGCATCCACGAAGGCCTTaGCAAAACGGACACCGTAGT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRHPRRP*QNGHRS
Trigger: ACTACGGTGTCCGTTTTGCCAAGGCCTTCGTGGATG...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGAAGTTGGCACCATCTTaGGTGGCCATCACCTGCACA +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLKLAPS*VAITCT
Trigger: TGTGCAGGTGATGGCCACCCAAGATGGTGCCAACTT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAACAAGATCAGTCCGGGTaGCACGGCGATAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQQDQSG*HGDSLG
Trigger: GCCAAGGCTATCGCCGTGCCACCCGGACTGATCTTG...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCACAGCACAGCACCAGTaGAATTTGCACTCACACTGG +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGTAQHQ*NLHSHW
Trigger: CCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGT...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCACAGCACAGCACCAGTaGAATTTGCACTCACACTGG +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPTAQHQ*NLHSHW
Trigger: CCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGT...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGCTGTGTGTTCAGGTTTaGTCCAGCCACTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRLCVQV*SSHSAF
Trigger: GAAGGCAGAGTGGCTGGACCAAACCTGAACACACAG...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGCCAGCCAGGACACCATaGTCCCTATGGATTACTCTC +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRPARTP*SLWITL
Trigger: GAGAGTAATCCATAGGGACCATGGTGTCCTGGCTGG...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCATCAGCGTCTGACAGCTaGGCACAGTGGCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPSASDS*AQWLAL
Trigger: AAGCGCAAGCCACTGTGCCCAGCTGTCAGACGCTGA...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATTGTGAGAACAGGGGCTaGCCAGGACCTGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNCENRG*PGPEAF
Trigger: GAAAGCCTCAGGTCCTGGCCAGCCCCTGTTCTCACA...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGAAACATACTCTCCCTaGCGTCCTCCCTTCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPETYSP*RPPFAP
Trigger: TGGGGCGAAGGGAGGACGCCAGGGAGAGTATGTTTC...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTGGAGAACTCTGTGTCTaGCACCTCTCTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPGELCV*HLSPQG
Trigger: GCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCC...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCAGGCAGTTCCCAAGTaGAGGGTCGGGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYQAVPK*RVGAEA
Trigger: GGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTG...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCCGTTAGGGGGCCAGTaGGAGAATGCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNPLGGQ*ENACLA
Trigger: TGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTGGCTGCAGTGAGCCATaGTCATGCCAGTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCGCSEP*SCQCTP
Trigger: TGGAGTGCACTGGCATGATCATGGCTCACTGCAGCC...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGAATTTGAGGCTGCAGTaGGCCATGATCATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLNLRLQ*AMIMPV
Trigger: CACTGGCATGATCATGGCTCACTGCAGCCTCAAATT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATGGTGGGAGGATTGCTTaGGCCTGGGAATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNGGRIA*AWEFEA
Trigger: AGCCTCAAATTCCCAGGCTCAAGCAATCCTCCCACC...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGAGACCACAAGGGCCCTaGCTAGCTCATGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRRPQGP*LAHVLC
Trigger: ACACAAAACATGAGCTAGTCAGGGCCCTTGTGGTCT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGAAGCACAGAGTAGCATaGGATGCCAGAAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLKHRVA*DARRGP
Trigger: TGGGCCTCTTCTGGCATCTCATGCTACTCTGTGCTT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCATGGTCTCAATCTCCTaGCCTCGTGATCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPMVSIS*PRDLPH
Trigger: GTGGGGCAGATCACGAGGTCAGGAGATTGAGACCAT...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTATGCCTGGGCAGACCATaGCCTTTCCTGTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVCLGRP*PFLSSS
Trigger: GGAACTCGACAGGAAAGGGCATGGTCTGCCCAGGCA...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGAGTGGATGTTGTCACTaGAGCCACCCCAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRSGCCH*SHPSQS
Trigger: ACTTTGACTGGGGTGGCTGCAGTGACAACATCCACT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAACCGCCGCACAGCCGTaGGACCACAGCGGTTATTAT +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLITAAQP*DHSGYY
Trigger: ATAATAACCGCTGTGGTCGCACGGCTGTGCGGCGGT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGGCAGGTAATCACCTGTaGGGCGGAAATCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLAGNHL*GGNLRV
Trigger: CACTCTCAGATTTCCGCCGCACAGGTGATTACCTGC...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAAGACACGGCCTGCAGTaGCTAGGGAACCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRERHGLQ*LGNLQP
Trigger: AGGCTGCAGGTTCCCTAGGCACTGCAGGCCGTGTCT...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAGACACGGCCTGCAGTaGCTAGGGAACCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETRHGLQ*LGNLQP
Trigger: AGGCTGCAGGTTCCCTAGGCACTGCAGGCCGTGTCT...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAACTTTTGATGTCTTGCTaGAGACACGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKLLMSC*RHGLQC
Trigger: GCACTGCAGGCCGTGTCTGCAGCAAGACATCAAAAG...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGTTCCTTTTGATGTCTTaGTGCAGACACGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRFLLMS*CRHGLQ
Trigger: CTGCAGGCCGTGTCTGCAGCAAGACATCAAAAGGAA...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATTTGGTCCAGCCACTCTaGCTTCTTGGGGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNLVQPL*LLGGFA
Trigger: TGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAA...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTGGGTGGAGGAAGGTGTaGATGCAAGGATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPGWRKV*MQGSCA
Trigger: AGCACAAGATCCTTGCATGCACACCTTCCTCCACCC...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGTAGCCACTGACTCCTaGTCCCAGCTTCAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCVATDS*SQLQRL
Trigger: TAGCCTTTGAAGCTGGGAGCAGGAGTCAGTGGCTAC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCAAACTGGCTACAGGCTaGGCAGCTGAGGTACTTCAG +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGKLATG*AAEVLQ
Trigger: CTGAAGTACCTCAGCTGCGCAGCCTGTAGCCAGTTT...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACACCCAGGGGGCGGCTCTaGAGGATTGCTTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETPRGRL*RIAYGE
Trigger: TTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGG...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGTGCTGGGACTCTGGTaGCCCCAACCCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYVLGLW*PQPWAS
Trigger: GGATGCCCAGGGTTGGGGGCACCAGAGTCCCAGCAC...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTATTCACGCCATTCTCCTaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVFTPFS*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAA...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAACTTCTGAGCCCACATaGAGAGGCAGTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQTSEPT*RGSWGW
Trigger: CCACCCCCAACTGCCTCTGCATGTGGGCTCAGAAGT...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGACTTCTGAGCCCACATaGAGAGGCAGTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKTSEPT*RGSWGW
Trigger: CCACCCCCAACTGCCTCTGCATGTGGGCTCAGAAGT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTCATGGGGCTGTGCTaGTATGCAGGAGGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKLMGLC*YAGGEQ
Trigger: TTGCTCACCTCCTGCATAGCAGCACAGCCCCATGAG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAGGCCTCATGGGGCTGTaGTGCTATGCAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETGLMGL*CYAGGE
Trigger: CTCACCTCCTGCATAGCAGCACAGCCCCATGAGGCC...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGAACACTCTCCTGCTCTaGCTCTTTTCCAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLNTLLL*LFSRSQ
Trigger: CTGACTCCTGGAAAAGAGGCAGAGCAGGAGAGTGTT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAATCAAAGTCCCCACGCTaGTCATGGTGTCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRESKSPR*SWCRPR
Trigger: CCGTGGCCGACACCATGACCAGCGTGGGGACTTTGA...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAACCACTCACGCCATaGCACTTACACTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKEPLTP*HLHSSF
Trigger: GAAGCTGGAGTGTAAGTGCCATGGCGTGAGTGGTTC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAAAGTTGGCACCATCTTaGGTGGCCATCACCTGCACA +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERKLAPS*VAITCT
Trigger: TGTGCAGGTGATGGCCACCCAAGATGGTGCCAACTT...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAGCCACTCTGCCTTCTTaGGGGCTTTGCAAGTATGGA +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERATLPS*GLCKYG
Trigger: TCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGC...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCCAGCCAGGACACCATaGTCCCTATGGATTACTCTC +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCPARTP*SLWITL
Trigger: GAGAGTAATCCATAGGGACCATGGTGTCCTGGCTGG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCGTGGCCCAGAGCTATaGCTCCCCCAACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYARGPEL*LPQPPA
Trigger: AGCAGGAGGTTGGGGGAGCCATAGCTCTGGGCCACG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATGTGAGAACAGGGGCTaGCCAGGACCTGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQCENRG*PGPEAF
Trigger: GAAAGCCTCAGGTCCTGGCCAGCCCCTGTTCTCACA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAACCGTTAGGGGGCCAGTaGGAGAATGCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQPLGGQ*ENACLA
Trigger: TGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGG...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAATGGTGCCCCCAACCCTaGGCATCCTCAGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREWCPQP*ASSGFE
Trigger: CTCAAAGCCTGAGGATGCCCAGGGTTGGGGGCACCA...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGAATTTCTTAAGGGTTTaGCTTGATTTATGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGNFLRV*LDLCQV
Trigger: AACCTGGCATAAATCAAGCCAAACCCTTAAGAAATT...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGTGTTCGCCGGCGGCTaGGGACCTAGGATCACCTGG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSVFAGG*GPRITW
Trigger: CCAGGTGATCCTAGGTCCCCAGCCGCCGGCGAACAC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369684.5
3UTR CAA 72 bp ACCTGCCTAATATATACTGATGCCTCATGTGGGCCCTaGAGATCAGACCTGCTTACCTGCTCTCCCACCATC +
Preference number: 4 (lower is better)
Translates to: TCLIYTDASCGP*RSDLLTCSPTI
Trigger: GATGGTGGGAGAGCAGGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGGCATCAGTATATATTAGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCCGCCCACTGAACGCATaGTGTCTGGGTAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFRPLNA*CLGNAG
Trigger: GCCAGCGTTACCCAGACATCATGCGTTCAGTGGGCG...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGTGGCGGAATTGGTGCTaGCACTCTCGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKWRNWC*HSRIHS
Trigger: AGAATGGATCCGAGAGTGTCAGCACCAATTCCGCCA...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTCTTGGCGGGCTGCGGTaGAGTTGGCACCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSLGGLR*SWHHLG
Trigger: CCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAG...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCCTTGAATTGGAGGGATaGGTGAGGTATCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPLELEG*VRYLCV
Trigger: AACACACAGATACCTCACTCATCCCTCCAATTCAAG...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCVSYIP*QLLPRA
Trigger: AGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAAC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGGGCTAAGACATTGCTaGTCTGAGGGACAGACCTCT +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPGLRHC*SEGQTS
Trigger: AGAGGTCTGTCCCTCAGATCAGCAATGTCTTAGCCC...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTTACAGGCTGCGCAGCTaGGGTACTTCAGTCATGTGC +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCYRLRS*GTSVMC
Trigger: GCACATGACTGAAGTACCTCAGCTGCGCAGCCTGTA...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCCTGCAGGAGCTAGGCTaGATGCCTCCCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLLQELG*MPPRDE
Trigger: CTCATCCCTGGGAGGCATTCAGCCTAGCTCCTGCAG...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAAACAACCACAGGTCATaGGCAGTAGGCTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKNNHRS*AVGLAV
Trigger: AACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTT...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCCTATCCCTTTACCTTTaGGGTCAGGGACAGGGCATA +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGLSLYL*GQGQGI
Trigger: TATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAG...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTAATCTCCTGACCTCGTaGTCTGCCCCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYANLLTS*SAPPRP
Trigger: AGGCCGAGGTGGGGCAGATCACGAGGTCAGGAGATT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCTGTCGCTCACTTCTCTaGGCTTGTCACACCTACTGG +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPCRSLL*ACHTYW
Trigger: CCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGACA...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGTTTTCCTCCCAGAGTaGTGGCTCTTGCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCVFLPE*WLLLAY
Trigger: GTAAGCAAGCAAGAGCCAGCACTCTGGGAGGAAAAC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCTCACCAGAAACACGGTaGCTGCTGGCAACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYISPETR*LLATWC
Trigger: GCACCAAGTTGCCAGCAGGCACCGTGTTTCTGGTGA...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTCACAGATCACTCGTaGCCCCAGTGCCCCAATGTA +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQVTDHS*PQCPNV
Trigger: TACATTGGGGCACTGGGGGCACGAGTGATCTGTGAC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTAGTGGATGTTGTCACTaGAGCCACCCCAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPSGCCH*SHPSQS
Trigger: ACTTTGACTGGGGTGGCTGCAGTGACAACATCCACT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCTTTTGATGTCTTGCTaGAGACACGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNLLMSC*RHGLQC
Trigger: GCACTGCAGGCCGTGTCTGCAGCAAGACATCAAAAG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGCGTCCACAGTATTTCTaGATTCCTTGCACCGTACAG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRRPQYF*IPCTVQ
Trigger: CTGTACGGTGCAAGGAATGCAGAAATACTGTGGACG...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTCCTTCTTGGGGGCTTTaGAAGTATGGACGTCCACAG +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSPSWGL*KYGRPQ
Trigger: CTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGG...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCCTTCTTGGGGGCTTTaGAAGTATGGACGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNPSWGL*KYGRPQ
Trigger: CTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGGGAGGAAGGTGTGCATaGAAGGATCTTGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRGGRCA*KDLVLL
Trigger: CAAAAGCACAAGATCCTTGCATGCACACCTTCCTCC...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCGCTCCCCCAACCTCCTaGTGCCTGTGCAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFAPPTS*CLCRVK
Trigger: CTTCACTCTGCACAGGCAGCAGGAGGTTGGGGGAGC...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCAAACTGGCTACAGGCTaGGCAGCTGAGGTACTTCAG +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPKLATG*AAEVLQ
Trigger: CTGAAGTACCTCAGCTGCGCAGCCTGTAGCCAGTTT...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTAGGGTCCCACCGACCTaGCCAGGAATGCATCACATT +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCRVPPT*PGMHHI
Trigger: AATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCT...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGCCCAAACCAAAGAGTTaGCTGCAGGTTGGTAATGTG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRPKPKS*LQVGNV
Trigger: CACATTACCAACCTGCAGGCAACTCTTTGGTTTGGG...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCACCCCACTGGCTATTaGCCTATACCTGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNHPTGY*PIPANH
Trigger: GTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCGGCCTCATGGGGCTGTaGTGCTATGCAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFGLMGL*CYAGGE
Trigger: CTCACCTCCTGCATAGCAGCACAGCCCCATGAGGCC...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCACTGGTTTTGTGGCTaGCTCCCTTACAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCHWFCG*LPYSTK
Trigger: TTTGGTGCTGTAAGGGAGGCAGCCACAAAACCAGTG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATTCAAAGTCCCCACGCTaGTCATGGTGTCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYSKSPR*SWCRPR
Trigger: CCGTGGCCGACACCATGACCAGCGTGGGGACTTTGA...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGAACCACTCACGCCATaGCACTTACACTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPEPLTP*HLHSSF
Trigger: GAAGCTGGAGTGTAAGTGCCATGGCGTGAGTGGTTC...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCTTTGGAAGGCTGCAGTaGGAGGATTGCTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCFGRLQ*EDCLRP
Trigger: TGGTCTCAAGCAATCCTCCCACTGCAGCCTTCCAAA...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGACCACCAGAGGAGTTCTaGTCCCCAAACCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERPPEEF*SPNQRV
Trigger: AACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGG...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATAAGGTGCTGGGACTCTaGTGCCCCCAACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYKVLGL*CPQPWA
Trigger: TGCCCAGGGTTGGGGGCACCAGAGTCCCAGCACCTT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGTCAGATATACTCTCTTaGCTGTCCTGGGACTCCTAC +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRSDILS*LSWDSY
Trigger: GTAGGAGTCCCAGGACAGCCAAGAGAGTATATCTGA...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTTTTATCCCCTCCATCTaGTGTGTGGCCTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCFIPSI*CVASWG
Trigger: GCCCCATGAGGCCACACACCAGATGGAGGGGATAAA...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGATTTGTCTCCTTCTTTaGCTGCTACTTCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLICLLL*LLLQPL
Trigger: CAGGGGCTGAAGTAGCAGCCAAAGAAGGAGACAAAT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAACAAATGCTATCACTaGTTTTGTGGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPNKCYH*FCGCLP
Trigger: AGGGAGGCAGCCACAAAACCAGTGATAGCATTTGTT...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTaGCTCAGTTTCTTATATCCCCTGACAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSNLQSGKSGS*LSFLYPLTTPS
Trigger: GGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp TGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATaGAGACCCCTTGCCTTGGTGTACACAAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: CCLPHLMGFSAG*RPLALVYTNCL
Trigger: CAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCTCACAACAATGCTGTaGGGTGGTTTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCLTTML*GGFCSL
Trigger: CAGAGAACAGAAACCACCTCACAGCATTGTTGTGAG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR TCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATGGCGGAATTGGTGCTaGCACTCTCGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQWRNWC*HSRIHS
Trigger: AGAATGGATCCGAGAGTGTCAGCACCAATTCCGCCA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGACCGTCTGTTCCTTTTaGTGTCTTGCTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKTVCSF*CLAADT
Trigger: CGTGTCTGCAGCAAGACATCAAAAGGAACAGACGGT...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATACTCGGCCACAGCACATaGTTTCACAACCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLILGHST*FHNRLF
Trigger: GAACAGACGGTTGTGAAATCATGTGCTGTGGCCGAG...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKVSYIP*QLLPRA
Trigger: AGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAAC...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTTTCCTAGAGAAGTCATaGTGGGCTAGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCFLEKS*WARPAR
Trigger: CCTGGCTGGTCTAGCCCATCATGACTTCTCTAGGAA...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCGCTGCTTCAAAAACATaGGGACCCCAAGGGATATTG +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGAASKT*GPQGIL
Trigger: CAATATCCCTTGGGGTCCTCATGTTTTTGAAGCAGC...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGACATTCTCTTGGCCTaGCTCACTCAGGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIDILLA*LTQAHF
Trigger: GAAATGGGCCTGAGTGAGTCAGGCCAAGAGAATGTC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCACCTGCATGTTCTTGTaGGAACAGGGGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLTCMFL*EQGLAR
Trigger: CCTGGCCAGCCCCTGTTCTCACAAGAACATGCAGGT...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAATGCCTCCCAGGGATaGGAAACATACTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKNASQG*ETYSPW
Trigger: CCAGGGAGAGTATGTTTCTCATCCCTGGGAGGCATT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGAACTCCTATGCAGCCTaGGAGAAGTTCTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLNSYAA*EKFSMC
Trigger: ACACATAGAGAACTTCTCTCAGGCTGCATAGGAGTT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGGTAATTCTTCACCACTaGTCTCTCCTCACCATGCCC +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKVILHH*SLLTMP
Trigger: GGGCATGGTGAGGAGAGATCAGTGGTGAAGAATTAC...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCGTAATTCTTCACCACTaGTCTCTCCTCACCATGCCC +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPVILHH*SLLTMP
Trigger: GGGCATGGTGAGGAGAGATCAGTGGTGAAGAATTAC...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCGGCATCCTCAGGCTTTaGGGAGAATACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGGILRL*GEYTGF
Trigger: AAATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCC...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTACTGCACCCGGCCTCTaGTACATATTTTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPTAPGL*YIFSKP
Trigger: AGGCTTTGAAAATATGTATCAGAGGCCGGGTGCAGT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTAATCTCCTGACCTCGTaGTCTGCCCCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSNLLTS*SAPPRP
Trigger: AGGCCGAGGTGGGGCAGATCACGAGGTCAGGAGATT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATTGCTTGCATCAGCTTaGGATCCCAGGACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLILLASA*DPRTFA
Trigger: GGCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAA...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGCAGGGAGAACAGTaGGAGCCAAGATCGATGGAC +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKKQGEQ*EPRSMD
Trigger: GTCCATCGATCTTGGCTCTCACTGTTCTCCCTGCTT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTTTAGATGATGACTTCTaGGCCCACATGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSLDDDF*AHMQRQ
Trigger: CTGCCTCTGCATGTGGGCTCAGAAGTCATCATCTAA...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTCTTGCAAGAAGCCATaGCCTCGTACTTTTATCCCC +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPSCKKP*PRTFIP
Trigger: GGGGATAAAAGTACGAGGTCATGGCTTCTTGCAAGA...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAACCCCAGTTCCACTaGGCTCCTGTGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKKPQFH*APVKVP
Trigger: TGGTACCTTCACAGGAGCTCAGTGGAACTGGGGTTT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTTGTAGGGGTCACAGCTaGACACACTCAGTTCACCCT +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCCRGHS*THSVHP
Trigger: AGGGTGAACTGAGTGTGTGCAGCTGTGACCCCTACA...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATGTAGGGGTCACAGCTaGACACACTCAGTTCACCCT +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQCRGHS*THSVHP
Trigger: AGGGTGAACTGAGTGTGTGCAGCTGTGACCCCTACA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGCAGGTAATCACCTGTaGGGCGGAAATCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIAGNHL*GGNLRV
Trigger: CACTCTCAGATTTCCGCCGCACAGGTGATTACCTGC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTGCAGGTAATCACCTGTaGGGCGGAAATCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCAGNHL*GGNLRV
Trigger: CACTCTCAGATTTCCGCCGCACAGGTGATTACCTGC...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCATAGCCTTGGCGGGCTaGGGTGAAGTTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLIALAG*GEVGTI
Trigger: GATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTAT...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCTATTTCTGCATTCCTTaGACCGTACAGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCYFCIP*TVQHST
Trigger: GGTGCTGTGCTGTACGGTGCAAGGAATGCAGAAATA...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCGTCCACAGTATTTCTaGATTCCTTGCACCGTACAG +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPRPQYF*IPCTVQ
Trigger: CTGTACGGTGCAAGGAATGCAGAAATACTGTGGACG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCGTCCACAGTATTTCTaGATTCCTTGCACCGTACAG +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCRPQYF*IPCTVQ
Trigger: CTGTACGGTGCAAGGAATGCAGAAATACTGTGGACG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAATTGGTCCAGCCACTCTaGCTTCTTGGGGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRELVQPL*LLGGFA
Trigger: TGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAA...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCGGGTGGAGGAAGGTGTaGATGCAAGGATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIGWRKV*MQGSCA
Trigger: AGCACAAGATCCTTGCATGCACACCTTCCTCCACCC...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAAGGTACCCTTCCTCTTaGACACCAAGAAGTATCGGG +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPRYPSS*TPRSIG
Trigger: CCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGGTAGCCACTGACTCCTaGTCCCAGCTTCAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKVATDS*SQLQRL
Trigger: TAGCCTTTGAAGCTGGGAGCAGGAGTCAGTGGCTAC...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGCTCCCCCAACCTCCTaGTGCCTGTGCAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSAPPTS*CLCRVK
Trigger: CTTCACTCTGCACAGGCAGCAGGAGGTTGGGGGAGC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGCTAGCTTGAGCTTCTaGCCTATGACCACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQASLSF*PMTTEC
Trigger: GCACTCAGTGGTCATAGGGCAGAAGCTCAAGCTAGC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTGCTAGCTTGAGCTTCTaGCCTATGACCACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCASLSF*PMTTEC
Trigger: GCACTCAGTGGTCATAGGGCAGAAGCTCAAGCTAGC...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCTCTCAGCACATAGGGTaGACATCTCACTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCSQHIG*TSHYLW
Trigger: CCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGA...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGCAGTCATAGGAGACTaGTCCATCATTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKAVIGD*SIILST
Trigger: TGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAGCAGTCATAGGAGACTaGTCCATCATTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERAVIGD*SIILST
Trigger: TGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGC...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGACCTGACCTCGTGATCTaGCCCACCTCGGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRPDLVI*PTSASQ
Trigger: TTGGGAGGCCGAGGTGGGGCAGATCACGAGGTCAGG...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTCTCCCAGGCTGGAGTaGAGTGGTGCATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYSPRLE*SGASWL
Trigger: GAGCCAAGATGCACCACTGCACTCCAGCCTGGGAGA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGGTGGCACCAGGGAACTaGTTTGGAAGAATAAGATTG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRVAPGN*FGRIRL
Trigger: CAATCTTATTCTTCCAAAGCAGTTCCCTGGTGCCAC...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGATTCTCTTCTTCACCTaGGAGCATCTACCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRILFFT*EHLPLL
Trigger: AAGGAGAGGTAGATGCTCCCAGGTGAAGAAGAGAAT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAACCCCTGCTGATGAGATaGCATATACAAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKPLLMR*HIQKLP
Trigger: AGGCAGCTTTTGTATATGCCATCTCATCAGCAGGGG...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCCCCTGCTGATGAGATaGCATATACAAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCPLLMR*HIQKLP
Trigger: AGGCAGCTTTTGTATATGCCATCTCATCAGCAGGGG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCACACTCAGTTCACCCTaGCTACAGGCGCGAGTAATA +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPTLSSP*LQARVI
Trigger: TATTACTCGCGCCTGTAGCCAGGGTGAACTGAGTGT...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTACATCCACGAAGGCCTTaGCAAAACGGACACCGTAGT +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVHPRRP*QNGHRS
Trigger: ACTACGGTGTCCGTTTTGCCAAGGCCTTCGTGGATG...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCGAACCACTCACGCCATaGCACTTACACTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIEPLTP*HLHSSF
Trigger: GAAGCTGGAGTGTAAGTGCCATGGCGTGAGTGGTTC...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCTTTGGAAGGCTGCAGTaGGAGGATTGCTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPFGRLQ*EDCLRP
Trigger: TGGTCTCAAGCAATCCTCCCACTGCAGCCTTCCAAA...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTGACAGCTGGGCACAGTaGCTTGCGCTTGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSDSWAQ*LALVRP
Trigger: TGGGCGTACAAGCGCAAGCCACTGTGCCCAGCTGTC...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATATAAATCTGCCCCCGTaGCCCAGAGCTATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYINLPP*PRAMAP
Trigger: GGGAGCCATAGCTCTGGGCCACGGGGGCAGATTTAT...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCAGGAAGACATTCTCTTaGCCTGACTCACTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIRKTFS*PDSLRP
Trigger: GGGCCTGAGTGAGTCAGGCCAAGAGAATGTCTTCCT...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCCAGGTTGACGTCCTATaGAAGGCATATGCCATTATT +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGQVDVL*KAYAII
Trigger: AATAATGGCATATGCCTTCCATAGGACGTCAACCTG...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCGTGGTGGGGCTCAAATaGACATCATTTCTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPVVGLK*TSFLSY
Trigger: ATAAGAGAGAAATGATGTCCATTTGAGCCCCACCAC...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGAGTGAGGGAACTAAATaGAGCCCTGACTGCACCAAA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLSEGTK*SPDCTK
Trigger: TTTGGTGCAGTCAGGGCTCCATTTAGTTCCCTCACT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTTAGCCTTTCTGTTTaGCCAGGGCTACTTACAGGG +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPLSLSV*PGLLTG
Trigger: CCCTGTAAGTAGCCCTGGCCAAACAGAAAGGCTAAG...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCGCAGGAGGTGAGCAATaGAATTCTTTAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGAGGEQ*NSLDDD
Trigger: GTCATCATCTAAAGAATTCCATTGCTCACCTCCTGC...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCCTCCATCTGGTGTGTaGCCTCATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYPPSGV*PHGAVL
Trigger: CAGCACAGCCCCATGAGGCCACACACCAGATGGAGG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCATCTCTGTTAGTCCCTaGGTCTGTAACAAATGGACT +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGISVSP*VCNKWT
Trigger: AGTCCATTTGTTACAGACCCAGGGACTAACAGAGAT...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCATTTATGCCAGGTTCTaGGCCTGTAAGCCTACATTA +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPIYARF*ACKPTL
Trigger: TAATGTAGGCTTACAGGCCCAGAACCTGGCATAAAT...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCTATCACTGGTTTTGTaGCTGCCTCCCTTACAGCAC +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNLSLVL*LPPLQH
Trigger: GTGCTGTAAGGGAGGCAGCCACAAAACCAGTGATAG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCGCACATTCATATTTCTaGGTGGTAGGGAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGAHSYF*VVGSPL
Trigger: AAGTGGGCTCCCTACCACCCAGAAATATGAATGTGC...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp TCAGACCTGCTTACCTGCTCTCCCACCATCCATGAGTaGCCTATCTTTCTTTTACTCCATGTCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SDLLTCSPTIHE*PIFLLLHVSPN
Trigger: GTTTGGGGAGACATGGAGTAAAAGAAAGATAGGCAACTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp GTTTGTCAACGCCCTCTCTTTTCTATCCCTTTACCTTaGAGGTCAGGGACAGGGCATATTACTGACACCCCA +
Preference number: 4 (lower is better)
Translates to: VCQRPLFSIPLP*RSGTGHITDTP
Trigger: TGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGAAAAGAGAGGGCGTTGACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTaGGTGTACACAAATTGCTTGCATCAGCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: LMGFSAGLRPLA*VYTNCLHQLEI
Trigger: GATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCTGCTTACTTCTCCTaGTCTAGACTTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIPAYFS*SRLPSQ
Trigger: CTGGGATGGAAGTCTAGATCAGGAGAAGTAAGCAGG...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACACTCGGCCACAGCACATaGTTTCACAACCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETLGHST*FHNRLF
Trigger: GAACAGACGGTTGTGAAATCATGTGCTGTGGCCGAG...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTTTCTTATATCCCCTaGCAACTCCTTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQVSYIP*QLLPRA
Trigger: AGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAAC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGCCTAATATATACTaGTGCCTCATGTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPLPNIY*CLMWAL
Trigger: AAGGGCCCACATGAGGCATCAGTATATATTAGGCAG...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGCCTAATATATACTaGTGCCTCATGTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKLPNIY*CLMWAL
Trigger: AAGGGCCCACATGAGGCATCAGTATATATTAGGCAG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTGGCTGCAGTGAGCCATaGTCATGCCAGTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSGCSEP*SCQCTP
Trigger: TGGAGTGCACTGGCATGATCATGGCTCACTGCAGCC...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATGGTGGGAGGATTGCTTaGGCCTGGGAATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYGGRIA*AWEFEA
Trigger: AGCCTCAAATTCCCAGGCTCAAGCAATCCTCCCACC...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACATTCCTAGAGAAGTCATaGTGGGCTAGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETFLEKS*WARPAR
Trigger: CCTGGCTGGTCTAGCCCATCATGACTTCTCTAGGAA...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGATTCAGCCCTATTGTTaGGTTCAGACTGACCATGAC +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLIQPYC*VQTDHD
Trigger: GTCATGGTCAGTCTGAACTCAACAATAGGGCTGAAT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGTTCCTTCCACAGGGATaGGAACCAAAAACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLFLPQG*EPKTKE
Trigger: TTCTTTGGTTTTTGGTTCTCATCCCTGTGGAAGGAA...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAGGGCTAAGACATTGCTaGTCTGAGGGACAGACCTCT +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETGLRHC*SEGQTS
Trigger: AGAGGTCTGTCCCTCAGATCAGCAATGTCTTAGCCC...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTACAGGCTGCGCAGCTaGGGTACTTCAGTCATGTGC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFYRLRS*GTSVMC
Trigger: GCACATGACTGAAGTACCTCAGCTGCGCAGCCTGTA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGATGTCCTGAGTGGGTCTaGGAATTTGGCAAAGACTTA +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERCPEWV*EFGKDL
Trigger: TAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACA...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAGGTCTCTGTGTAATGTaGAGCTCTCCCGTATTTCAT +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERGLCVM*SSPVFH
Trigger: ATGAAATACGGGAGAGCTTCACATTACACAGAGACC...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGACAGGGCATATTACTaGCACCCCACTGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREDRAYY*HPTGYC
Trigger: GCAATAGCCAGTGGGGTGTCAGTAATATGCCCTGTC...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATGGGAAGTGGGAAAATaGGTTTGTCAACGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQWEVGK*VCQRPL
Trigger: GAGAGGGCGTTGACAAACTCATTTTCCCACTTCCCA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGGCATCCTCAGGCTTTaGGGAGAATACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPGILRL*GEYTGF
Trigger: AAATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCC...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGAAAACAAAGAGGGGTTaGGAGCAGCAAGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRKTKRG*EQQVFD
Trigger: ATCAAACACTTGCTGCTCTCAACCCCTCTTTGTTTT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAGCATCCCAGAGCTATaGTTGATGAACATTGTACTT +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPSIPEL*LMNIVL
Trigger: AAGTACAATGTTCATCAATCATAGCTCTGGGATGCT...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTTAAGGGTTTGGCTTaGTTTATGCCAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKLKGLA*FMPGSG
Trigger: CCCAGAACCTGGCATAAATCAAGCCAAACCCTTAAG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGACCAGTTATACAAGTTaGGACTTCTGTCTCTATGCC +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLTSYTS*DFCLYA
Trigger: GGCATAGAGACAGAAGTCTCAACTTGTATAACTGGT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAACAGAGTGCTGGCTCTTaGTTGCTTACTTGGCTTATT +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKQSAGS*LLTWLI
Trigger: AATAAGCCAAGTAAGCAAGCAAGAGCCAGCACTCTG...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCACTCGTGCCCCCAGTaGCCCAATGTACTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIHSCPQ*PNVLLV
Trigger: AACTAAAAGTACATTGGGGCACTGGGGGCACGAGTG...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGGGCATATACAAAAGCTaGCTCTCGGCTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKGIYKS*LSATSE
Trigger: CTCAGAAGTAGCCGAGAGGCAGCTTTTGTATATGCC...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAAGTGGATGTTGTCACTaGAGCCACCCCAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLISGCCH*SHPSQS
Trigger: ACTTTGACTGGGGTGGCTGCAGTGACAACATCCACT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATATAGCCTTGGCGGGCTaGGGTGAAGTTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYIALAG*GEVGTI
Trigger: GATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTAT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGTATTTCTGCATTCCTTaGACCGTACAGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKYFCIP*TVQHST
Trigger: GGTGCTGTGCTGTACGGTGCAAGGAATGCAGAAATA...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTAGGTACCCTTCCTCTTaGACACCAAGAAGTATCGGG +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCRYPSS*TPRSIG
Trigger: CCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGCAGAGTAGCATGAGATaGCAGAAGAGGCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKQSSMR*QKRPIS
Trigger: GGAAATGGGCCTCTTCTGGCATCTCATGCTACTCTG...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAATCTACAAGAAGTTTTaGAAACAGACCCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKIYKKF*KQTLRA
Trigger: GGCCCTGAGGGTCTGTTTGCAAAACTTCTTGTAGAT...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAATCTACAAGAAGTTTTaGAAACAGACCCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERIYKKF*KQTLRA
Trigger: GGCCCTGAGGGTCTGTTTGCAAAACTTCTTGTAGAT...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCACATTGTTCTCTGGTaGTGTAATTTGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLHIVLW*CNLAAG
Trigger: TCCTGCAGCCAAATTACAGCACCAGAGAACAATGTG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTCGACCTGCCCAGGAATaGATCACATTGTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCRPAQE*ITLFSG
Trigger: ACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCG...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTAGGGTCCCACCGACCTaGCCAGGAATGCATCACATT +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYARVPPT*PGMHHI
Trigger: AATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCCCGTATTTCATTTCTaGACCCAGGGGGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYPVFHF*TQGAAL
Trigger: CAGAGCCGCCCCCTGGGTGCAGAAATGAAATACGGG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGCTTGTTATCCAACATTaGTTCAAAGATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLLVIQH*FKDAQP
Trigger: GGGTTGGGCATCTTTGAAGCAATGTTGGATAACAAG...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCGATCTCTCCTCACCATaGCCTTCCTGCATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLDLSSP*PSCILP
Trigger: GGGAAGGATGCAGGAAGGGCATGGTGAGGAGAGATC...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGGCATGAACCAGCCTTaGGAACTTATACAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPGMNQP*ELIQSQ
Trigger: CTGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCC...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAGGAGAATGCTTGCCTTaGATTTGCACATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERGECLP*ICTSRM
Trigger: CATTCTGGATGTGCAAATGCAAGGCAAGCATTCTCC...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCTGCATCTTGGCTCACTaGAAGCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLCILAH*KLCLLG
Trigger: ACCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATGCA...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTAGATCCCAGGACCTTTaGCAGGCCACGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSRSQDL*QATGRH
Trigger: ATGCCTACCCGTGGCCTGGCAAAGGTCCTGGGATCT...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCAGGATTGAGACCCCTTaGCTTGGTGTACACAAATTG +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCRIETP*LGVHKL
Trigger: CAATTTGTGTACACCAAGGCAAGGGGTCTCAATCCT...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTATCTCATGGGTTTCTCTaGAGGATTGAGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVSHGFL*RIETPC
Trigger: GCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGA...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGGATCAAGTGAAAATCTaGTGTCTGCCTCATCTCATG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRDQVKI*CLPHLM
Trigger: CATGAGATGAGGCAGACAGCAGATTTTCACTTGATC...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTCATTCAACACTCTCCTaGTCTGCCTCTTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSHSTLS*SASFPG
Trigger: TCCTGGAAAAGAGGCAGAGCAGGAGAGTGTTGAATG...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGATGCCTTCTTCTGACTaGCCTCAGTCAGTTCATAAA +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLMPSSD*PQSVHK
Trigger: TTTATGAACTGACTGAGGGCAGTCAGAAGAAGGCAT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGTGCCTGCTGGCAACTTaGTGCACTGTATATGCTATC +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKCLLAT*CTVYAI
Trigger: GATAGCATATACAGTGCACCAAGTTGCCAGCAGGCA...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTACAACCACATTGCTTaGGCTCTTCAGGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGYNHIA*ALQGLE
Trigger: TTCCAAACCCTGAAGAGCCCAAGCAATGTGGTTGTA...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAACTGTGTGTTCAGGTTTaGTCCAGCCACTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRELCVQV*SSHSAF
Trigger: GAAGGCAGAGTGGCTGGACCAAACCTGAACACACAG...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCGAACCTTGTCCACTATaGCTAACATCTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPEPCPL*LTSQAL
Trigger: GAGAGCCTGAGATGTTAGCCATAGTGGACAAGGTTC...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGACCCCAAGGGATATTaGAGAGGAACTTTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCDPKGY*RGTLER
Trigger: TCTTTCCAAAGTTCCTCTCCAATATCCCTTGGGGTC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAAGTGCTTCTCTCTTATaGAGATCATCCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKSASLL*RSSLES
Trigger: GGATTCCAGGGATGATCTCCATAAGAGAGAAGCACT...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTGGCATCTGTCTGGCTTaGGATGGGAGTTTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCGICLA*DGSFLG
Trigger: TCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCC...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGCTATCACTGGTTTTGTaGCTGCCTCCCTTACAGCAC +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKLSLVL*LPPLQH
Trigger: GTGCTGTAAGGGAGGCAGCCACAAAACCAGTGATAG...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAAATTGGAGGGATGAGTaGGGTATCTGTGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLINWRDE*GICVFR
Trigger: CCTGAACACACAGATACCTCACTCATCCCTCCAATT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTAATTGGAGGGATGAGTaGGGTATCTGTGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCNWRDE*GICVFR
Trigger: CCTGAACACACAGATACCTCACTCATCCCTCCAATT...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTCTCCCACCATCCATaGGTTGCCTATCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPLSHHP*VAYLSF
Trigger: AAAAGAAAGATAGGCAACTCATGGATGGTGGGAGAG...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAGACCACAAGGGCCCTaGCTAGCTCATGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETRPQGP*LAHVLC
Trigger: ACACAAAACATGAGCTAGTCAGGGCCCTTGTGGTCT...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCGACATTCTCTTGGCCTaGCTCACTCAGGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFDILLA*LTQAHF
Trigger: GAAATGGGCCTGAGTGAGTCAGGCCAAGAGAATGTC...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAAGCACAGAGTAGCATaGGATGCCAGAAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLKHRVA*DARRGP
Trigger: TGGGCCTCTTCTGGCATCTCATGCTACTCTGTGCTT...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCAAGACATTGCTGATCTaGGGGACAGACCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPKTLLI*GTDLYQ
Trigger: TTGATAGAGGTCTGTCCCTCAGATCAGCAATGTCTT...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGGGTCTCTGTGTAATGTaGAGCTCTCCCGTATTTCAT +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKGLCVM*SSPVFH
Trigger: ATGAAATACGGGAGAGCTTCACATTACACAGAGACC...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGTGCAGGTTGGTAATGTaGCTTTGTAGATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLCRLVM*LCRYSL
Trigger: CAAGGAATATCTACAAAGTCACATTACCAACCTGCA...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATGACAGGGCATATTACTaGCACCCCACTGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYDRAYY*HPTGYC
Trigger: GCAATAGCCAGTGGGGTGTCAGTAATATGCCCTGTC...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTTGCTTGCATCAGCTTaGGATCCCAGGACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYLLASA*DPRTFA
Trigger: GGCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCAGAGCAGCAAGTGTTTaGTCAAGTGAAAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCRAASV*SSENLL
Trigger: CAGCAGATTTTCACTTGATCAAACACTTGCTGCTCT...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCAAAACAAAGAGGGGTTaGGAGCAGCAAGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGKTKRG*EQQVFD
Trigger: ATCAAACACTTGCTGCTCTCAACCCCTCTTTGTTTT...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCGCAGCCACAGCTTGTTaGTCTATTTATTATAATCCA +
Preference number: 4 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGAATAC*SIYYNP
Trigger: TGGATTATAATAAATAGAGCAACAAGCTGTGGCTGC...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGACAGAAACACGGTGCCTaGTGGCAACTTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRQKHGA*WQLGAL
Trigger: CAGTGCACCAAGTTGCCAGCAGGCACCGTGTTTCTG...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGTCACAGATCACTCGTaGCCCCAGTGCCCCAATGTA +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSVTDHS*PQCPNV
Trigger: TACATTGGGGCACTGGGGGCACGAGTGATCTGTGAC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCGGCATATACAAAAGCTaGCTCTCGGCTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIGIYKS*LSATSE
Trigger: CTCAGAAGTAGCCGAGAGGCAGCTTTTGTATATGCC...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATGGAAATCAGGGAGCTTaGTCAGTTTCTTATATCCCC +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNGNQGA*SVSYIP
Trigger: GGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCC...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGTCTATACCACTCTGCTaGTTTAAGATATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRSIPLC*FKISTG
Trigger: GCCTGTTGATATCTTAAAGCAGCAGAGTGGTATAGA...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCACATTGCTTCAAAGATaGCCAACCCCCGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYITLLQR*PTPVVA
Trigger: TGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGT...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTACATTGCTTCAAAGATaGCCAACCCCCGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCTLLQR*PTPVVA
Trigger: TGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGT...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCCTTGTTATCCAACATTaGTTCAAAGATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGLVIQH*FKDAQP
Trigger: GGGTTGGGCATCTTTGAAGCAATGTTGGATAACAAG...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCAAACCAAAGAGTTaGCTGCAGGTTGGTAATGTG +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIPKPKS*LQVGNV
Trigger: CACATTACCAACCTGCAGGCAACTCTTTGGTTTGGG...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGCAGTCTCAGCCACTCTaGTTTGATGGTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLQSQPL*FDGNSS
Trigger: TGAAGAATTACCATCAAAGCAGAGTGGCTGAGACTG...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCTCTCAGCACATAGGGTaGACATCTCACTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYISQHIG*TSHYLW
Trigger: CCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGA...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCACCCCACTGGCTATTaGCCTATACCTGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYHPTGY*PIPANH
Trigger: GTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATGGGCCAGTGGGAGAATaGTTGCCTTGCATTTGCACA +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYGPVGE*LPCICT
Trigger: TGTGCAAATGCAAGGCAAGCATTCTCCCACTGGCCC...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATGGGCCAGTGGGAGAATaGTTGCCTTGCATTTGCACA +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYGPVGE*LPCICT
Trigger: TGTGCAAATGCAAGGCAAGCATTCTCCCACTGGCCC...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAATTCCTCCCAGAGTGCTaGCTCTTGCTTGCTTACTTG +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREFLPEC*LLLAYL
Trigger: CAAGTAAGCAAGCAAGAGCCAGCACTCTGGGAGGAA...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCCGGCCAAAGACGGTGTaGTCCCGGTCCAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGARPKTV*SRSRVV
Trigger: TACCACCCTGGACCGGGACCACACCGTCTTTGGCCG...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTGCGCGAGTAATAGCGTaGACTACCCCTGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSARVIA*TTPADE
Trigger: CTCATCAGCAGGGGTAGTCCACGCTATTACTCGCGC...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAATTTGCACTCACACTaGGTAACACGGGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKNLHSH*VTRVTR
Trigger: TCGAGTCACCCGTGTTACCCAGTGTGAGTGCAAATT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTAATTTGCACTCACACTaGGTAACACGGGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCNLHSH*VTRVTR
Trigger: TCGAGTCACCCGTGTTACCCAGTGTGAGTGCAAATT...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAACACCATGGTCCCTATaGATTACTCTCTACATCCTT +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERTPWSL*ITLYIL
Trigger: AAGGATGTAGAGAGTAATCCATAGGGACCATGGTGT...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCAGGAAGACATTCTCTTaGCCTGACTCACTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFRKTFS*PDSLRP
Trigger: GGGCCTGAGTGAGTCAGGCCAAGAGAATGTCTTCCT...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGGAGAACTCTGTGTCTaGCACCTCTCTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSGELCV*HLSPQG
Trigger: GCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTTTTATCCCCTCCATCTaGTGTGTGGCCTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSFIPSI*CVASWG
Trigger: GCCCCATGAGGCCACACACCAGATGGAGGGGATAAA...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCATTTGTCTCCTTCTTTaGCTGCTACTTCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIICLLL*LLLQPL
Trigger: CAGGGGCTGAAGTAGCAGCCAAAGAAGGAGACAAAT...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGCACATTCATATTTCTaGGTGGTAGGGAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIAHSYF*VVGSPL
Trigger: AAGTGGGCTCCCTACCACCCAGAAATATGAATGTGC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTaGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFL*HTKKYREAGAK
Trigger: CTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CAGGGACAGGGCATATTACTGACACCCCACTGGCTATaGCCCTATACCTGCCAATCACCCAAAGAAAATAAT +
Preference number: 4 (lower is better)
Translates to: QGQGILLTPHWL*PYTCQSPKENN
Trigger: ATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGATAGCTATCACTTTTTaGAGGCTTATGTCAATGACC +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRIAITF*RLMSMT
Trigger: GGTCATTGACATAAGCCTTCAAAAAGTGATAGCTAT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR TCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGATGGCGGAATTGGTGCTaGCACTCTCGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRWRNWC*HSRIHS
Trigger: AGAATGGATCCGAGAGTGTCAGCACCAATTCCGCCA...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTACCGTCTGTTCCTTTTaGTGTCTTGCTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYATVCSF*CLAADT
Trigger: CGTGTCTGCAGCAAGACATCAAAAGGAACAGACGGT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAAAACATATGAGCATGTaGATGGAACCTTGTCCACTA +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERKHMSM*MEPCPL
Trigger: TAGTGGACAAGGTTCCATTCACATGCTCATATGTTT...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGCTCTCCCACCATCCATaGGTTGCCTATCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKLSHHP*VAYLSF
Trigger: AAAAGAAAGATAGGCAACTCATGGATGGTGGGAGAG...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATAATTTGAGGCTGCAGTaGGCCATGATCATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYNLRLQ*AMIMPV
Trigger: CACTGGCATGATCATGGCTCACTGCAGCCTCAAATT...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCAGTTGACTCCATTCTaGAGGAAGACATTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIQLTPF*RKTFSW
Trigger: CCAAGAGAATGTCTTCCTTCAGAATGGAGTCAACTG...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGAAACTTGCATCTTTATaGGCTAGAATTTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLKLASL*ARIWSP
Trigger: TGGGCTCCAAATTCTAGCTCATAAAGATGCAAGTTT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAAATGCCTCCCAGGGATaGGAAACATACTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRNASQG*ETYSPW
Trigger: CCAGGGAGAGTATGTTTCTCATCCCTGGGAGGCATT...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAATCAATAACCAGGTGTaGGCTACAGGTCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVINNQV*ATGLCV
Trigger: TACACAGAGACCTGTAGCTCACACCTGGTTATTGAT...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTATCAATAACCAGGTGTaGGCTACAGGTCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCINNQV*ATGLCV
Trigger: TACACAGAGACCTGTAGCTCACACCTGGTTATTGAT...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCCTATCCCTTTACCTTTaGGGTCAGGGACAGGGCATA +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLLSLYL*GQGQGI
Trigger: TATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAG...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACAGGGGCTGTTGGGGTTaGAGTCAAGTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHRGCWG*SQVTAF
Trigger: AAATGCGGTGACTTGACTTCAACCCCAACAGCCCCT...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAACTGCACCCGGCCTCTaGTACATATTTTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETTAPGL*YIFSKP
Trigger: AGGCTTTGAAAATATGTATCAGAGGCCGGGTGCAGT...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAAAGCAGGGAGAACAGTaGGAGCCAAGATCGATGGAC +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRKQGEQ*EPRSMD
Trigger: GTCCATCGATCTTGGCTCTCACTGTTCTCCCTGCTT...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTTTAGATGATGACTTCTaGGCCCACATGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYALDDDF*AHMQRQ
Trigger: CTGCCTCTGCATGTGGGCTCAGAAGTCATCATCTAA...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCTGCTATGCAGGAGGTaGGCAATGGAATTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYILLCRR*AMEFFR
Trigger: TCTAAAGAATTCCATTGCTCACCTCCTGCATAGCAG...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGTATACACAAGACCTATaGAGCTGCTGTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKYTQDL*SCCHQQ
Trigger: CTGCTGATGACAGCAGCTTCATAGGTCTTGTGTATA...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATATACACAAGACCTATaGAGCTGCTGTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIYTQDL*SCCHQQ
Trigger: CTGCTGATGACAGCAGCTTCATAGGTCTTGTGTATA...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGAGTAAGTTAGTTGCATaGTGGCATCTTCTAATTCAG +
Preference number: 4 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLSKLVA*WHLLIQ
Trigger: CTGAATTAGAAGATGCCATCATGCAACTAACTTACT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATTGTAGGGGTCACAGCTaGACACACTCAGTTCACCCT +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYCRGHS*THSVHP
Trigger: AGGGTGAACTGAGTGTGTGCAGCTGTGACCCCTACA...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCGTGCACGCCAGCAGGTaGGCAGAGTACAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAVHASR*AEYRNH
Trigger: GTGGTTCCTGTACTCTGCGCACCTGCTGGCGTGCAC...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTTTTGATGTCTTGCTaGAGACACGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHLLMSC*RHGLQC
Trigger: GCACTGCAGGCCGTGTCTGCAGCAAGACATCAAAAG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCCTTCTTGGGGGCTTTaGAAGTATGGACGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHPSWGL*KYGRPQ
Trigger: CTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGAGGAAGGTGTGCATaGAAGGATCTTGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREGGRCA*KDLVLL
Trigger: CAAAAGCACAAGATCCTTGCATGCACACCTTCCTCC...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGGAAATCAGGGAGCTTaGTCAGTTTCTTATATCCCC +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQGNQGA*SVSYIP
Trigger: GGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGATCAGACCTGCTTACCTaGTCTCCCACCATCCATGAG +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRSDLLT*SPTIHE
Trigger: CTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGA...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTACTTTGGCCCCAACCTaGAGTACTCCTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSTLAPT*STPSHC
Trigger: ACAGTGGGAAGGAGTACTGCAGGTTGGGGCCAAAGT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGCTGCAGTGGGAGGATTaGTTGAGACCAAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKLQWED*LRPRIQ
Trigger: TTGAATTCTTGGTCTCAAGCAATCCTCCCACTGCAG...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGATCCAGAATTCTTTATaGAGGCTCCTTAATCTACAG +
Preference number: 4 (lower is better)
Translates to: RELAQFLISPDNSFPGLRIQNSL*RLLNLQ
Trigger: CTGTAGATTAAGGAGCCTGCATAAAGAATTCTGGAT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCCAGAGTAGCATGAGATaGCAGAAGAGGCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFQSSMR*QKRPIS
Trigger: GGAAATGGGCCTCTTCTGGCATCTCATGCTACTCTG...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTCTCATGGGTTTCTCTaGAGGATTGAGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFSHGFL*RIETPC
Trigger: GCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATCACCTCCTGTGGAATaGCATCTCTGCTTAATCTCA +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQSPPVE*HLCLIS
Trigger: TGAGATTAAGCAGAGATGGCATTCCACAGGAGGTGA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGACACACACACACTCAGTaGCACACTGGGTCAGACCCA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRHTHTQ*HTGSDP
Trigger: TGGGTCTGACCCAGTGTGGCACTGAGTGTGTGTGTG...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCACTGGTTTTGTGGCTaGCTCCCTTACAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYHWFCG*LPYSTK
Trigger: TTTGGTGCTGTAAGGGAGGCAGCCACAAAACCAGTG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTACACTCAGTTCACCCTaGCTACAGGCGCGAGTAATA +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYATLSSP*LQARVI
Trigger: TATTACTCGCGCCTGTAGCCAGGGTGAACTGAGTGT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCATCCACGAAGGCCTTaGCAAAACGGACACCGTAGT +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYHPRRP*QNGHRS
Trigger: ACTACGGTGTCCGTTTTGCCAAGGCCTTCGTGGATG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTAAGTTGGCACCATCTTaGGTGGCCATCACCTGCACA +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSKLAPS*VAITCT
Trigger: TGTGCAGGTGATGGCCACCCAAGATGGTGCCAACTT...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAACAAGACACAGTAATCTaGAGAGTTGTCAAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKQDTVI*RVVKVD
Trigger: GTCTACTTTGACAACTCTCCAGATTACTGTGTCTTG...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAATTTGCACTCACACTaGGTAACACGGGTGACTCGA +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETNLHSH*VTRVTR
Trigger: TCGAGTCACCCGTGTTACCCAGTGTGAGTGCAAATT...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTACAGCACAGCACCAGTaGAATTTGCACTCACACTGG +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYATAQHQ*NLHSHW
Trigger: CCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGCTGTGTATCACTTTaGCCCCAACCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLSCVSL*PQPAVL
Trigger: GAGTACTGCAGGTTGGGGCCAAAGTGATACACAGCT...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAACTGCGGGCTGGAGTTTaGTGCATAATTAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQLRAGV*CIIKTQ
Trigger: CTGAGTTTTAATTATGCACCAAACTCCAGCCCGCAG...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCGACCCCAAGGGATATTaGAGAGGAACTTTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIDPKGY*RGTLER
Trigger: TCTTTCCAAAGTTCCTCTCCAATATCCCTTGGGGTC...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCAGGTTGACGTCCTATaGAAGGCATATGCCATTATT +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNQVDVL*KAYAII
Trigger: AATAATGGCATATGCCTTCCATAGGACGTCAACCTG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGTTGGCAAAGACTTACTaGTTGGTGTTCTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLLAKTY*LVFLIR
Trigger: CCTTATCAAGAACACCAACCAGTAAGTCTTTGCCAA...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGTGGGTCTGAGAATTTaGCAAAGACTTACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVVGLRI*QRLTGW
Trigger: CCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCAC...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCCACCAGAGGAGTTCTaGTCCCCAAACCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAPPEEF*SPNQRV
Trigger: AACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTATATGGAGATCATCCCTaGAATCCAAAGCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVYGDHP*NPKLSS
Trigger: ACTGGAGAGCTTTGGATTCCAGGGATGATCTCCATA...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTAATAAAGCCACCACTTaGTCTTTTCCAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSNKATT*SFPVLL
Trigger: GAGAAGCACTGGAAAAGACCAAGTGGTGGCTTTATT...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTTGGCAAAAGAGCCATTaGTTGATAAGGTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCWQKSH*LIRFRR
Trigger: CCTCCTGAACCTTATCAACCAATGGCTCTTTTGCCA...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTGGCATCTGTCTGGCTTaGGATGGGAGTTTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAGICLA*DGSFLG
Trigger: TCCTAAGAAACTCCCATCCCAAGCCAGACAGATGCC...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCGCATACGTCATCTTTTaGAGCTGCTCTTACTCACTG +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIAYVIF*SCSYSL
Trigger: CAGTGAGTAAGAGCAGCTCCAAAAGATGACGTATGC...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGCATACGTCATCTTTTaGAGCTGCTCTTACTCACTG +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIAYVIF*SCSYSL
Trigger: CAGTGAGTAAGAGCAGCTCCAAAAGATGACGTATGC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTATAGATCCCTACAATTaGGAAGGAGTTAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: ENLLSASSHGFLCRIETPIDPYN*EGVNPL
Trigger: TAGAGGGTTAACTCCTTCCCAATTGTAGGGATCTAT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGACCAGGGAACTGCTTTaGAAGAATAAGATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKTRELL*KNKIAL
Trigger: AAGGGCAATCTTATTCTTCCAAAGCAGTTCCCTGGT...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAAACAAATGCTATCACTaGTTTTGTGGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLINKCYH*FCGCLP
Trigger: AGGGAGGCAGCCACAAAACCAGTGATAGCATTTGTT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCCACCTCCATAGAACTTaGTTGAAAATAATGAGCATA +
Preference number: 4 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPHLHRT*LKIMSI
Trigger: TATGCTCATTATTTTCAACCAAGTTCTATGGAGGTG...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp ATACGTCATCTTTTGGAGCTGCTCTTACTCACTGTCTaGCGCCTAAACAGAGGTCCAGATTTTGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: IRHLLELLLLTV*RLNRGPDFGWE
Trigger: TTCCCATCCAAAATCTGGACCTCTGTTTAGGCGCAAGACAGTGAGTAAGAGCAGCTCCAAAAGATGACGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp ATTGAACAGAAGAGTTCCCCTTGCATACGTCATCTTTaGGAGCTGCTCTTACTCACTGTCTTGCGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: IEQKSSPCIRHL*ELLLLTVLRLN
Trigger: GTTTAGGCGCAAGACAGTGAGTAAGAGCAGCTCCAAAAGATGACGTATGCAAGGGGAACTCTTCTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACATGTGCCTGTGCTCATaGTGCTCCTCAATTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHMCLCS*CSSIQA
Trigger: AGCCTGAATTGAGGAGCATCATGAGCACAGGCACAT...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR TCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTACATGTGGGAAAGTGTaGTATAGGAGAAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSTCGKV*YRRKSE
Trigger: TTCACTCTTTCTCCTATATCACACTTTCCCACATGT...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256640.9
ENST00000369686.9
CDS-3UTR TCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATAATTGGAGGGATGAGTaGGGTATCTGTGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYNWRDE*GICVFR
Trigger: CCTGAACACACAGATACCTCACTCATCCCTCCAATT...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACACTTGAATTGGAGGGATaGGTGAGGTATCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETLELEG*VRYLCV
Trigger: AACACACAGATACCTCACTCATCCCTCCAATTCAAG...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTACACTTGTTGAACGCTaGCTGTGTAGGTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSTLVER*LCRYAR
Trigger: CCTGGCATACCTACACAGTCAGCGTTCAACAAGTGT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS-3UTR TCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGCTGCCTGTGCAGAGTaGAGCTGCTTCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHAACAE*SCFKNM
Trigger: CATGTTTTTGAAGCAGCTTCACTCTGCACAGGCAGC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAAGATTTAAGTCAGGTTaGCGTCCTATGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIRFKSG*RPMEGI
Trigger: TATGCCTTCCATAGGACGTCAACCTGACTTAAATCT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATTGGGAAGTGGGAAAATaGGTTTGTCAACGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYWEVGK*VCQRPL
Trigger: GAGAGGGCGTTGACAAACTCATTTTCCCACTTCCCA...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTCTTGCAAGAAGCCATaGCCTCGTACTTTTATCCCC +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFSCKKP*PRTFIP
Trigger: GGGGATAAAAGTACGAGGTCATGGCTTCTTGCAAGA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTTGTGTGGCAGCCTGCTaGATAGATCCCTACAATTGG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSCVAAC*IDPYNW
Trigger: CCAATTGTAGGGATCTATTCAGCAGGCTGCCACACA...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAAACCCCAGTTCCACTaGGCTCCTGTGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRKPQFH*APVKVP
Trigger: TGGTACCTTCACAGGAGCTCAGTGGAACTGGGGTTT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGTTGAATTCCAAAAATaGTTATGGCTACCACTCCAA +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCVEFQK*LWLPLQ
Trigger: TTGGAGTGGTAGCCATAAGCATTTTTGGAATTCAAC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256640.9
ENST00000369686.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTTTCCTTTTGATGTCTTaGTGCAGACACGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSFLLMS*CRHGLQ
Trigger: CTGCAGGCCGTGTCTGCAGCAAGACATCAAAAGGAA...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATGGAGGAAGGTGTGCATaGAAGGATCTTGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYGGRCA*KDLVLL
Trigger: CAAAAGCACAAGATCCTTGCATGCACACCTTCCTCC...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATAGGTACCCTTCCTCTTaGACACCAAGAAGTATCGGG +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYRYPSS*TPRSIG
Trigger: CCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGCCACCATCCATGAGTTaGCTATCTTTCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKPPSMS*LSFFYS
Trigger: GGAGTAAAAGAAAGATAGGCAACTCATGGATGGTGG...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATCAGACCTGCTTACCTaGTCTCCCACCATCCATGAG +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRSDLLT*SPTIHE
Trigger: CTCATGGATGGTGGGAGAGCAGGTAAGCAGGTCTGA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAACCAGAGATCCCTACCTaGCTAATATATACTGATGCC +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREPEIPT*LIYTDA
Trigger: GGCATCAGTATATATTAGGCAGGTAGGGATCTCTGG...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCATCCAGAATTCTTTATaGAGGCTCCTTAATCTACAG +
Preference number: 4 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGIQNSL*RLLNLQ
Trigger: CTGTAGATTAAGGAGCCTGCATAAAGAATTCTGGAT...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCGACCTGCCCAGGAATaGATCACATTGTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHRPAQE*ITLFSG
Trigger: ACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTGGCAGTTATACCCCATaGAGTCATAGGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSGSYTP*SHRRLL
Trigger: GAGCAGTCTCCTATGACTGCATGGGGTATAACTGCC...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAGGAGAATGCTTGCCTTaGATTTGCACATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETGECLP*ICTSRM
Trigger: CATTCTGGATGTGCAAATGCAAGGCAAGCATTCTCC...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCAGTGGGAGAATGCTTaGCTTGCATTTGCACATCCA +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAQWENA*LAFAHP
Trigger: TGGATGTGCAAATGCAAGGCAAGCATTCTCCCACTG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGTGTACACAAATTGCTTaGATCAGCTTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKCTQIA*ISLRSQ
Trigger: CTGGGATCTCAAGCTGATGCAAGCAATTTGTGTACA...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGTTGGTGTACACAAATTaGTTGCATCAGCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKLVYTN*LHQLEI
Trigger: GATCTCAAGCTGATGCAAGCAATTTGTGTACACCAA...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAGGATTGAGACCCCTTaGCTTGGTGTACACAAATTG +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETRIETP*LGVHKL
Trigger: CAATTTGTGTACACCAAGGCAAGGGGTCTCAATCCT...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAATCACCTCCTGTGGAATaGCATCTCTGCTTAATCTCA +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRESPPVE*HLCLIS
Trigger: TGAGATTAAGCAGAGATGGCATTCCACAGGAGGTGA...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGTGGCACCAGGGAACTaGTTTGGAAGAATAAGATTG +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREVAPGN*FGRIRL
Trigger: CAATCTTATTCTTCCAAAGCAGTTCCCTGGTGCCAC...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTACACTCAGTTCACCCTaGCTACAGGCGCGAGTAATA +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSTLSSP*LQARVI
Trigger: TATTACTCGCGCCTGTAGCCAGGGTGAACTGAGTGT...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAACACCATGGTCCCTATaGATTACTCTCTACATCCTT +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLITPWSL*ITLYIL
Trigger: AAGGATGTAGAGAGTAATCCATAGGGACCATGGTGT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAAACCTAGTTAGGCAATaGGTAATAGCATTACCCATT +
Preference number: 4 (lower is better)
Translates to: VPFLLHTKKYREAGAKERNLVRQ*VIALPI
Trigger: AATGGGTAATGCTATTACCCATTGCCTAACTAGGTT...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACTTACTGACACCCCACTaGCTATTGCCCTATACCTGC +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHLLTPH*LLPYTC
Trigger: GCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAA...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGACTTAGCCTTTCTGTTTaGCCAGGGCTACTTACAGGG +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRLSLSV*PGLLTG
Trigger: CCCTGTAAGTAGCCCTGGCCAAACAGAAAGGCTAAG...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCTCAGATATACTCTCTTaGCTGTCCTGGGACTCCTAC +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLSDILS*LSWDSY
Trigger: GTAGGAGTCCCAGGACAGCCAAGAGAGTATATCTGA...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACATGGCAAAAGAGCCATTaGTTGATAAGGTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETWQKSH*LIRFRR
Trigger: CCTCCTGAACCTTATCAACCAATGGCTCTTTTGCCA...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCTGTCTGGCTTGGGATaGGAGTTTCTTAGGACACTT +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYLSGLG*EFLRTL
Trigger: AAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTATCTCTGTTAGTCCCTaGGTCTGTAACAAATGGACT +
Preference number: 4 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCISVSP*VCNKWT
Trigger: AGTCCATTTGTTACAGACCCAGGGACTAACAGAGAT...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGACCAGGGAACTGCTTTaGAAGAATAAGATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKTRELL*KNKIAL
Trigger: AAGGGCAATCTTATTCTTCCAAAGCAGTTCCCTGGT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTATATGGCACACGTTTTaGCTTATTCAGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSIWHTF*LIQCTH
Trigger: GTGTGTACACTGAATAAGCCAAAACGTGTGCCATAT...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTaGGTGTTCTTGATAAGGGAAGTGAGACAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSGSENLAKTYW*VFLIREVRQRR
Trigger: TCTCCTTTGTCTCACTTCCCTTATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAAAACATATGAGCATGTaGATGGAACCTTGTCCACTA +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIKHMSM*MEPCPL
Trigger: TAGTGGACAAGGTTCCATTCACATGCTCATATGTTT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCCCTCATGTGGGCCCTTaGGATCAGACCTGCTTACCT +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAPHVGP*DQTCLP
Trigger: AGGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGG...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCATTCAGCCCTATTGTTaGGTTCAGACTGACCATGAC +
Preference number: 4 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLIQPYC*VQTDHD
Trigger: GTCATGGTCAGTCTGAACTCAACAATAGGGCTGAAT...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATTGTCCTGAGTGGGTCTaGGAATTTGGCAAAGACTTA +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYCPEWV*EFGKDL
Trigger: TAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACA...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATGCAGGTTGGTAATGTaGCTTTGTAGATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQCRLVM*LCRYSL
Trigger: CAAGGAATATCTACAAAGTCACATTACCAACCTGCA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCACGCACTGTTCATGTaGCCTTGGACAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYHALFM*PWTNHQ
Trigger: TTGGTGATTTGTCCAAGGTCACATGAACAGTGCGTG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTCACGCACTGTTCATGTaGCCTTGGACAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSHALFM*PWTNHQ
Trigger: TTGGTGATTTGTCCAAGGTCACATGAACAGTGCGTG...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAAAAACATTACAGGATTaGACAGAAGAGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVKTLQD*TEEFPL
Trigger: CAAGGGGAACTCTTCTGTTCAATCCTGTAATGTTTT...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCTGCTATGCAGGAGGTaGGCAATGGAATTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYALLCRR*AMEFFR
Trigger: TCTAAAGAATTCCATTGCTCACCTCCTGCATAGCAG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATGTGTGGCAGCCTGCTaGATAGATCCCTACAATTGG +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRCVAAC*IDPYNW
Trigger: CCAATTGTAGGGATCTATTCAGCAGGCTGCCACACA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTCAATACTCTGTTTCTaGAAGTGGCACCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFSILCF*KWHQGT
Trigger: AGTTCCCTGGTGCCACTTTCAGAAACAGAGTATTGA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGATAAAACAACCAGCATaGGCAATCAGCTTATGTCAG +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKIKQPA*AISLCQ
Trigger: CTGACATAAGCTGATTGCTCATGCTGGTTGTTTTAT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGATTTTACAACCACATTaGTTGGGCTCTTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKILQPH*LGSSGF
Trigger: AAACCCTGAAGAGCCCAAGCAATGTGGTTGTAAAAT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGGCATATACAAAAGCTaGCTCTCGGCTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSGIYKS*LSATSE
Trigger: CTCAGAAGTAGCCGAGAGGCAGCTTTTGTATATGCC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCCACTCGTGCCCCCAGTaGCCCAATGTACCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAHSCPQ*PNVPLQ
Trigger: TTGCAAAGGTACATTGGGGCACTGGGGGCACGAGTG...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGACTCTCTGGACAGCTTaGTCTTTTCTTAACCATTTA +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKTLWTA*SFLNHL
Trigger: TAAATGGTTAAGAAAAGAGCAAGCTGTCCAGAGAGT...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCCACATTGTTCTCTGGTaGTGTAATTTGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFHIVLW*CNLAAG
Trigger: TCCTGCAGCCAAATTACAGCACCAGAGAACAATGTG...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCGATCTCTCCTCACCATaGCCTTCCTGCATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGADLSSP*PSCILP
Trigger: GGGAAGGATGCAGGAAGGGCATGGTGAGGAGAGATC...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACACAGTCTCAGCCACTCTaGTTTGATGGTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETQSQPL*FDGNSS
Trigger: TGAAGAATTACCATCAAAGCAGAGTGGCTGAGACTG...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGGCATGAACCAGCCTTaGGAACTTATACAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHGMNQP*ELIQSQ
Trigger: CTGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGTGCTTGCCTTGCATTTaGACATCCAGAATGACTAAA +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKCLPCI*TSRMTK
Trigger: TTTAGTCATTCTGGATGTGCAAATGCAAGGCAAGCA...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCAGTGGGAGAATGCTTaGCTTGCATTTGCACATCCA +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHQWENA*LAFAHP
Trigger: TGGATGTGCAAATGCAAGGCAAGCATTCTCCCACTG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGACTCTAATGTCCAGCTaGTCCATCGATATACTCATA +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKTLMSS*SIDILI
Trigger: TATGAGTATATCGATGGAGCAGCTGGACATTAGAGT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCTGCATCTTGGCTCACTaGAAGCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGACILAH*KLCLLG
Trigger: ACCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATGCA...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATGTCATCTTTTGGAGCTaGTCTTACTCACTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYVIFWS*SYSLSC
Trigger: GCAAGACAGTGAGTAAGAGCAGCTCCAAAAGATGAC...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTATGGACTCATCCTTGTaGTTTTCCATAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSMDSSL*FSIGAL
Trigger: CAGGGCACCTATGGAAAAGCACAAGGATGAGTCCAT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATATGGACTCATCCTTGTaGTTTTCCATAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYMDSSL*FSIGAL
Trigger: CAGGGCACCTATGGAAAAGCACAAGGATGAGTCCAT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCTCTCTAAAGCTCTTTTaGAGCTCTTCTATTCACTAT +
Preference number: 4 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCSLKLF*SSSIHY
Trigger: ATAGTGAATAGAAGAGCTGCAAAAGAGCTTTAGAGA...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCATTTCATCCATTCATCTaGATTCCTGTTCAAACTAGC +
Preference number: 4 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPFHPFI*IPVQTS
Trigger: GCTAGTTTGAACAGGAATGCAGATGAATGGATGAAA...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGCTATCCTCATTCCTTaGAATGCCCTTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREAILIP*NALHSL
Trigger: AAGAGAATGAAGGGCATTCCAAGGAATGAGGATAGC...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGACCCCTGCTGATGAGATaGCATATACAAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRPLLMR*HIQKLP
Trigger: AGGCAGCTTTTGTATATGCCATCTCATCAGCAGGGG...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAACCTTGTCCACTATaGCTAACATCTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSEPCPL*LTSQAL
Trigger: GAGAGCCTGAGATGTTAGCCATAGTGGACAAGGTTC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAGCTGTGTATCACTTTaGCCCCAACCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRSCVSL*PQPAVL
Trigger: GAGTACTGCAGGTTGGGGCCAAAGTGATACACAGCT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTAGTGAGGGAACTAAATaGAGCCCTGACTGCACCAAA +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSSEGTK*SPDCTK
Trigger: TTTGGTGCAGTCAGGGCTCCATTTAGTTCCCTCACT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTGTGGGTCTGAGAATTTaGCAAAGACTTACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAVGLRI*QRLTGW
Trigger: CCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCAC...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTACATCTCACTATCTCTaGCATGAACCAGCCTTGCGA +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSTSHYL*HEPALR
Trigger: TCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAACATCTCACTATCTCTaGCATGAACCAGCCTTGCGA +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRTSHYL*HEPALR
Trigger: TCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGT...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATTACTGACACCCCACTaGCTATTGCCCTATACCTGC +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRLLTPH*LLPYTC
Trigger: GCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGACTGTCTGGCTTGGGATaGGAGTTTCTTAGGACACTT +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRLSGLG*EFLRTL
Trigger: AAGTGTCCTAAGAAACTCCCATCCCAAGCCAGACAG...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAATAGATCCCTACAATTaGGAAGGAGTTAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIIDPYN*EGVNPL
Trigger: TAGAGGGTTAACTCCTTCCCAATTGTAGGGATCTAT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCAGAAACCTAGAATATaGCACACGTTTTGGCTTATT +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNQKPRI*HTFWLI
Trigger: AATAAGCCAAAACGTGTGCCATATTCTAGGTTTCTG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCAATAACATTTCCCTaGTTGCTTAACCAGTTATAC +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSAITFP*LLNQLY
Trigger: GTATAACTGGTTAAGCAACCAGGGAAATGTTATTGC...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGGCTTGTCACACCTACTaGAATAAGCAGAAATTGTTA +
Preference number: 4 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKACHTY*NKQKLL
Trigger: TAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGC...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CCCAGCAGCCTGGCATATAATATAAGGCAGCTTCCTTaGGTAAATTCATTCAGCCCTATTGTTGAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PSSLAYNIRQLP*VNSFSPIVEFR
Trigger: TCTGAACTCAACAATAGGGCTGAATGAATTTACCAAAGGAAGCTGCCTTATATTATATGCCAGGCTGCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp GCAGTGAGTGTTCAGAAATTAGATCTACAAGAAGTTTaGCAAACAGACCCTCAGGGCCAGGCAATGTTTGTT +
Preference number: 4 (lower is better)
Translates to: AVSVQKLDLQEV*QTDPQGQAMFV
Trigger: AACAAACATTGCCTGGCCCTGAGGGTCTGTTTGCAAAACTTCTTGTAGATCTAATTTCTGAACACTCACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGACTTGAATTGGAGGGATaGGTGAGGTATCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRLELEG*VRYLCV
Trigger: AACACACAGATACCTCACTCATCCCTCCAATTCAAG...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCAGTTGACTCCATTCTaGAGGAAGACATTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSQLTPF*RKTFSW
Trigger: CCAAGAGAATGTCTTCCTTCAGAATGGAGTCAACTG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACAAGACATTGCTGATCTaGGGGACAGACCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHKTLLI*GTDLYQ
Trigger: TTGATAGAGGTCTGTCCCTCAGATCAGCAATGTCTT...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTAACTCCTATGCAGCCTaGGAGAAGTTCTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSNSYAA*EKFSMC
Trigger: ACACATAGAGAACTTCTCTCAGGCTGCATAGGAGTT...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAAACATCTTAAGTAAATaGGGAATAGCCACCGAGATG +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRENILSK*GIATEM
Trigger: CATCTCGGTGGCTATTCCTCATTTACTTAAGATGTT...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAACATTACAGGATTaGACAGAAGAGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETKTLQD*TEEFPL
Trigger: CAAGGGGAACTCTTCTGTTCAATCCTGTAATGTTTT...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGACTTAAGGGTTTGGCTTaGTTTATGCCAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRLKGLA*FMPGSG
Trigger: CCCAGAACCTGGCATAAATCAAGCCAAACCCTTAAG...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACACTCTGGGAGAACAGATaGAAAATAAGCCAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETLWENR*KISQLD
Trigger: ATCTAACTGGCTTATTTTTCATCTGTTCTCCCAGAG...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGTGCTGGCTCTTGCTTaGTTACTTGGCTTATTATGG +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHVLALA*LLGLLW
Trigger: CCATAATAAGCCAAGTAAGCAAGCAAGAGCCAGCAC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAGGAAATCAGGGAGCTTaGTCAGTTTCTTATATCCCC +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRGNQGA*SVSYIP
Trigger: GGGGATATAAGAAACTGAGCAAGCTCCCTGATTTCC...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCCCCAATGTACCTTTaGAAACACTTGTTGAACGCT +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYAPMYL*KHLLNA
Trigger: AGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGC...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGGAGGAAAAATTAATTaGTTGGCCATCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSGGKIN*LAIIPF
Trigger: AAAAGGAATGATGGCCAAGCAATTAATTTTTCCTCC...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTAAGTTAGCTTTTATCTaGAGGGCTAGGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAKLAFI*RARLRL
Trigger: CAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCGCGGCTCTGCAGGATTaGTTACGGAGAACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAAALQD*LRRTLC
Trigger: ACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGC...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTGTACACAAATTGCTTaGATCAGCTTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYCTQIA*ISLRSQ
Trigger: CTGGGATCTCAAGCTGATGCAAGCAATTTGTGTACA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAATTGGTGTACACAAATTaGTTGCATCAGCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFRELVYTN*LHQLEI
Trigger: GATCTCAAGCTGATGCAAGCAATTTGTGTACACCAA...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCAGAAGAGTTCCCCTTaGATACGTCATCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSQKSSP*IRHLLE
Trigger: CTCCAAAAGATGACGTATGCAAGGGGAACTCTTCTG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTTCCCTCTATTTAGAATaGCTTCTTCTGACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSSLYLE*LLLTAL
Trigger: GAGGGCAGTCAGAAGAAGGCATTCTAAATAGAGGGA...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATTCCCTCTATTTAGAATaGCTTCTTCTGACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYSLYLE*LLLTAL
Trigger: GAGGGCAGTCAGAAGAAGGCATTCTAAATAGAGGGA...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGATGATACTAACAAATaGTATCACTGGTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIDDTNK*YHWFCG
Trigger: GCCACAAAACCAGTGATAGCATTTGTTAGTATCATC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATAGACTTCTGTCTCTATaGCTATCTTATAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNRLLSL*LSYNSF
Trigger: GAAGCTATTATAAGATAGGCATAGAGACAGAAGTCT...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAACAAGACACAGTAATCTaGAGAGTTGTCAAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREQDTVI*RVVKVD
Trigger: GTCTACTTTGACAACTCTCCAGATTACTGTGTCTTG...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGAACCTTGTCCACTATaGCTAACATCTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQREPCPL*LTSQAL
Trigger: GAGAGCCTGAGATGTTAGCCATAGTGGACAAGGTTC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAACCTAGTTAGGCAATaGGTAATAGCATTACCCATT +
Preference number: 4 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKNLVRQ*VIALPI
Trigger: AATGGGTAATGCTATTACCCATTGCCTAACTAGGTT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTCTGCGGGCTGGAGTTTaGTGCATAATTAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSLRAGV*CIIKTQ
Trigger: CTGAGTTTTAATTATGCACCAAACTCCAGCCCGCAG...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATGTGGTGGGGCTCAAATaGACATCATTTCTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYVVGLK*TSFLSY
Trigger: ATAAGAGAGAAATGATGTCCATTTGAGCCCCACCAC...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATAGTGCTTCTCTCTTATaGAGATCATCCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYSASLL*RSSLES
Trigger: GGATTCCAGGGATGATCTCCATAAGAGAGAAGCACT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGCCATGAGTGGGAAGTaGGAAAATGAGTTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSAMSGK*ENEFVN
Trigger: GTTGACAAACTCATTTTCCCACTTCCCACTCATGGC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCAGAAACCTAGAATATaGCACACGTTTTGGCTTATT +
Preference number: 4 (lower is better)
Translates to: SLQISRAGNQGACSVSYIQKPRI*HTFWLI
Trigger: AATAAGCCAAAACGTGTGCCATATTCTAGGTTTCTG...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp ATCTATCCTAGGAGTGTTCTAGGGTGTTTTAATGATTaGTTAAGCATGGGAACCACTGCATTCCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: IYPRSVLGCFND*LSMGTTAFHLS
Trigger: ACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACTCCTAGGATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp AAAGTGGCACCAGGGAACTGCTTTGGAAGAATAAGATaGCCCTTATGGTTTTTATCCTCAGAAGTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: KVAPGNCFGRIR*PLWFLSSEVRE
Trigger: TTCCCTAACTTCTGAGGATAAAAACCATAAGGGCAATCTTATTCTTCCAAAGCAGTTCCCTGGTGCCACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCACCGTCTGTTCCTTTTaGTGTCTTGCTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGATVCSF*CLAADT
Trigger: CGTGTCTGCAGCAAGACATCAAAAGGAACAGACGGT...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATAAACATATGAGCATGTaGATGGAACCTTGTCCACTA +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYKHMSM*MEPCPL
Trigger: TAGTGGACAAGGTTCCATTCACATGCTCATATGTTT...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCTGCCCTATGACCACTaGGTGCATTTAAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYLPYDH*VHLNKN
Trigger: GTTTTTATTTAAATGCACTCAGTGGTCATAGGGCAG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCAACAACCACAGGTCATaGGCAGTAGGCTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGANNHRS*AVGLAV
Trigger: AACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTT...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATCAATACTCTGTTTCTaGAAGTGGCACCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRSILCF*KWHQGT
Trigger: AGTTCCCTGGTGCCACTTTCAGAAACAGAGTATTGA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCTCTGGGAGAACAGATaGAAAATAAGCCAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYALWENR*KISQLD
Trigger: ATCTAACTGGCTTATTTTTCATCTGTTCTCCCAGAG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCCACCATCCATGAGTTaGCTATCTTTCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHPPSMS*LSFFYS
Trigger: GGAGTAAAAGAAAGATAGGCAACTCATGGATGGTGG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACAAGTTAGCTTTTATCTaGAGGGCTAGGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHKLAFI*RARLRL
Trigger: CAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTT...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATTGCTTGCCTTGCATTTaGACATCCAGAATGACTAAA +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYCLPCI*TSRMTK
Trigger: TTTAGTCATTCTGGATGTGCAAATGCAAGGCAAGCA...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCACTCTAATGTCCAGCTaGTCCATCGATATACTCATA +
Preference number: 4 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFTLMSS*SIDILI
Trigger: TATGAGTATATCGATGGAGCAGCTGGACATTAGAGT...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCTTATTCCCTCATCTTaGTTTCCTAACCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYLIPSS*FPNPGV
Trigger: AACTCCTGGGTTAGGAAAGCAAGATGAGGGAATAAG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGTCATCTTTTGGAGCTaGTCTTACTCACTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRVIFWS*SYSLSC
Trigger: GCAAGACAGTGAGTAAGAGCAGCTCCAAAAGATGAC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTATGCCTTCTTCTGACTaGCCTCAGTCAGTTCATAAA +
Preference number: 4 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSMPSSD*PQSVHK
Trigger: TTTATGAACTGACTGAGGGCAGTCAGAAGAAGGCAT...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACATTTCATCCATTCATCTaGATTCCTGTTCAAACTAGC +
Preference number: 4 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETFHPFI*IPVQTS
Trigger: GCTAGTTTGAACAGGAATGCAGATGAATGGATGAAA...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCAAGACACAGTAATCTaGAGAGTTGTCAAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: VAHFSELVTPTGISRNCYQDTVI*RVVKVD
Trigger: GTCTACTTTGACAACTCTCCAGATTACTGTGTCTTG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATACACCATGGTCCCTATaGATTACTCTCTACATCCTT +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYTPWSL*ITLYIL
Trigger: AAGGATGTAGAGAGTAATCCATAGGGACCATGGTGT...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATATGGAGATCATCCCTaGAATCCAAAGCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRYGDHP*NPKLSS
Trigger: ACTGGAGAGCTTTGGATTCCAGGGATGATCTCCATA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGCAGGAGGTGAGCAATaGAATTCTTTAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHAGGEQ*NSLDDD
Trigger: GTCATCATCTAAAGAATTCCATTGCTCACCTCCTGC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATTGGGTCTGTAACAAATaGACTCATCCTTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYWVCNK*THPCAF
Trigger: AAAAGCACAAGGATGAGTCCATTTGTTACAGACCCA...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTATTTATGCCAGGTTCTaGGCCTGTAAGCCTACATTA +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSIYARF*ACKPTL
Trigger: TAATGTAGGCTTACAGGCCCAGAACCTGGCATAAAT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATACACCTCCATAGAACTTaGTTGAAAATAATGAGCATA +
Preference number: 4 (lower is better)
Translates to: SPFKSPEREIRELAQFLIHLHRT*LKIMSI
Trigger: TATGCTCATTATTTTCAACCAAGTTCTATGGAGGTG...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAGATTTAAGTCAGGTTaGCGTCCTATGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRRFKSG*RPMEGI
Trigger: TATGCCTTCCATAGGACGTCAACCTGACTTAAATCT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTCTGCCCTATGACCACTaGGTGCATTTAAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSLPYDH*VHLNKN
Trigger: GTTTTTATTTAAATGCACTCAGTGGTCATAGGGCAG...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAAACATCTTAAGTAAATaGGGAATAGCCACCGAGATG +
Preference number: 4 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRNILSK*GIATEM
Trigger: CATCTCGGTGGCTATTCCTCATTTACTTAAGATGTT...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAGAGCAGCAAGTGTTTaGTCAAGTGAAAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRRAASV*SSENLL
Trigger: CAGCAGATTTTCACTTGATCAAACACTTGCTGCTCT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTATAAAACAACCAGCATaGGCAATCAGCTTATGTCAG +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSIKQPA*AISLCQ
Trigger: CTGACATAAGCTGATTGCTCATGCTGGTTGTTTTAT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAACCAGTTATACAAGTTaGGACTTCTGTCTCTATGCC +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRTSYTS*DFCLYA
Trigger: GGCATAGAGACAGAAGTCTCAACTTGTATAACTGGT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGAGGAAAAATTAATTaGTTGGCCATCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREGGKIN*LAIIPF
Trigger: AAAAGGAATGATGGCCAAGCAATTAATTTTTCCTCC...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTTGTAAAGCCAATCAATaGAGAAGCAAGCTAAGAACT +
Preference number: 4 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYACKANQ*RSKLRT
Trigger: AGTTCTTAGCTTGCTTCTGCATTGATTGGCTTTACA...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCCATTCAACACTCTCCTaGTCTGCCTCTTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAHSTLS*SASFPG
Trigger: TCCTGGAAAAGAGGCAGAGCAGGAGAGTGTTGAATG...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGACATCACATTGTTCTCTaGTGCTGTAATTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRHHIVL*CCNLAA
Trigger: TGCAGCCAAATTACAGCACCAGAGAACAATGTGATG...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTTGGGTCTGTAACAAATaGACTCATCCTTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSWVCNK*THPCAF
Trigger: AAAAGCACAAGGATGAGTCCATTTGTTACAGACCCA...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAAACTTGCATCTTTATaGGCTAGAATTTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRKLASL*ARIWSP
Trigger: TGGGCTCCAAATTCTAGCTCATAAAGATGCAAGTTT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR TCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAGCATCCCAGAGCTATaGTTGATGAACATTGTACTT +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRSIPEL*LMNIVL
Trigger: AAGTACAATGTTCATCAATCATAGCTCTGGGATGCT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATCTATACCACTCTGCTaGTTTAAGATATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRSIPLC*FKISTG
Trigger: GCCTGTTGATATCTTAAAGCAGCAGAGTGGTATAGA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACACTCTCTGGACAGCTTaGTCTTTTCTTAACCATTTA +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHTLWTA*SFLNHL
Trigger: TAAATGGTTAAGAAAAGAGCAAGCTGTCCAGAGAGT...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCCAGAAGAGTTCCCCTTaGATACGTCATCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAQKSSP*IRHLLE
Trigger: CTCCAAAAGATGACGTATGCAAGGGGAACTCTTCTG...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGATGATACTAACAAATaGTATCACTGGTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYDDTNK*YHWFCG
Trigger: GCCACAAAACCAGTGATAGCATTTGTTAGTATCATC...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCGCCATGAGTGGGAAGTaGGAAAATGAGTTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAAMSGK*ENEFVN
Trigger: GTTGACAAACTCATTTTCCCACTTCCCACTCATGGC...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATAATTTCTTAAGGGTTTaGCTTGATTTATGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYNFLRV*LDLCQV
Trigger: AACCTGGCATAAATCAAGCCAAACCCTTAAGAAATT...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAATATGGCACACGTTTTaGCTTATTCAGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRIWHTF*LIQCTH
Trigger: GTGTGTACACTGAATAAGCCAAAACGTGTGCCATAT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGCAATAACATTTCCCTaGTTGCTTAACCAGTTATAC +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHAITFP*LLNQLY
Trigger: GTATAACTGGTTAAGCAACCAGGGAAATGTTATTGC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTTGTCACACCTACTaGAATAAGCAGAAATTGTTA +
Preference number: 4 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYACHTY*NKQKLL
Trigger: TAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGC...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
3UTR CAA 72 bp CACTTATTCCCTCATCTTGCTTTCCTAACCCAGGAGTaGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HLFPHLAFLTQE*TSFLKGVKSQR
Trigger: TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAATAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGTTGAATTCCAAAAATaGTTATGGCTACCACTCCAA +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRVEFQK*LWLPLQ
Trigger: TTGGAGTGGTAGCCATAAGCATTTTTGGAATTCAAC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS-3UTR GCA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGATTCCTTTGTAAACTGTaGTCAGATATACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRFLCKL*SDILSW
Trigger: CCAAGAGAGTATATCTGAGCACAGTTTACAAAGGAA...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACTCTCTAAAGCTCTTTTaGAGCTCTTCTATTCACTAT +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHSLKLF*SSSIHY
Trigger: ATAGTGAATAGAAGAGCTGCAAAAGAGCTTTAGAGA...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTAGACTTCTGTCTCTATaGCTATCTTATAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSRLLSL*LSYNSF
Trigger: GAAGCTATTATAAGATAGGCATAGAGACAGAAGTCT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CCA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACTCTTGCTTGCTTACTTaGCTTATTATGGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHSCLLT*LIMGFV
Trigger: TACAAAACCCATAATAAGCCAAGTAAGCAAGCAAGA...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCTGTAAAGCCAATCAATaGAGAAGCAAGCTAAGAACT +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGACKANQ*RSKLRT
Trigger: AGTTCTTAGCTTGCTTCTGCATTGATTGGCTTTACA...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR GCA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCTTCCTTTGTAAACTGTaGTCAGATATACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAFLCKL*SDILSW
Trigger: CCAAGAGAGTATATCTGAGCACAGTTTACAAAGGAA...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS GCA 90 bp GGCGACGGCACAGGGACCGGGGCGCTGGCGCGCCGAAGCGGGAGCTaGGCAGCTTCCTCCGCACCACCCGGTCTCAGCATAGCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: GDGTGTGALARRSGS*AASSAPPGLSIAPR
Trigger: TCGGGGAGCTATGCTGAGACCGGGTGGTGCGGAGGAAGCTGCGCAGCTCCCGCTTCGGCGCGCCAGCGCCCCGGTCCCTGTGCCGTCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS CCA 90 bp GTTGCGATGTCCGGAAGCCGACGACGGCGTGCCGAACCCGGGGTCTaGGGCGCGCTGCCTGAGGACCGGGTGCGGTGTCAGGGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: VAMSGSRRRRAEPGV*GALPEDRVRCQGVC
Trigger: GCAGACCCCCTGACACCGCACCCGGTCCTCAGGCAGCGCGCCCCAGACCCCGGGTTCGGCACGCCGTCGTCGGCTTCCGGACATCGCAAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS TCA 90 bp CAAGATCAGTCCGGGTGGCACGGCGATAGCCTTGGCGGGCTGCGGTaGAGTTGGCACCATCTTGGGTGGCCATCACCTGCACAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: QDQSGWHGDSLGGLR*SWHHLGWPSPAQPH
Trigger: ATGGGGCTGTGCAGGTGATGGCCACCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTATCGCCGTGCCACCCGGACTGATCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS TCA 90 bp TTGGTGCTGACACTCTCGGATCCATTCTCGGGCACCCTCGCCCACTaGACGCATGATGTCTGGGTAACGCTGGCACAGCTGCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LVLTLSDPFSGTLAH*THDVWVTLAQLPLP
Trigger: CGGCAGCGGCAGCTGTGCCAGCGTTACCCAGACATCATGCGTTCAGTGGGCGAGGGTGCCCGAGAATGGATCCGAGAGTGTCAGCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
ENST00000478360.1
CDS GCA 90 bp GTAGACAAGATCAGTCCGGGTGGCACGGCGATAGCCTTGGCGGGCTaGGGTGAAGTTGGCACCATCTTGGGTGGCCATCACCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: VDKISPGGTAIALAG*GEVGTILGGHHLHS
Trigger: GCTGTGCAGGTGATGGCCACCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTATCGCCGTGCCACCCGGACTGATCTTGTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 90 bp TCACCTGCACAGCCCCATCATAGCGTCGCCGCAGGTAATCACCTGTaGGGCGGAAATCTGAGAGTGCACGCCAGCAGGTGCGCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: SPAQPHHSVAAGNHL*GGNLRVHASRCAEY
Trigger: GTACTCTGCGCACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACAGGTGATTACCTGCGGCGACGCTATGATGGGGCTGTGCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS TCA 90 bp CCCATCATAGCGTCGCCGCAGGTAATCACCTGTGCGGCGGAAATCTaGGAGTGCACGCCAGCAGGTGCGCAGAGTACAGGAACCACTCAC +
Preference number: 5 (lower is better)
Translates to: PIIASPQVITCAAEI*ECTPAGAQSTGTTH
Trigger: GTGAGTGGTTCCTGTACTCTGCGCACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACAGGTGATTACCTGCGGCGACGCTATGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCGGGCTGCGGTGAAGTaGGCACCATCTTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCRAAVK*APSWVA
Trigger: GGCCACCCAAGATGGTGCCAACTTCACCGCAGCCCG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCGGGCTGCGGTGAAGTaGGCACCATCTTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: ENLLSASSHGFLCRIETPRAAVK*APSWVA
Trigger: GGCCACCCAAGATGGTGCCAACTTCACCGCAGCCCG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGGCACGGCGATAGCCTaGGCGGGCTGCGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKGTAIA*AGCGEV
Trigger: AACTTCACCGCAGCCCGCCAAGGCTATCGCCGTGCC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 90 bp CCGCTGCCGGCTCACCAAACCAGGGATATTGTCACAGATCACTCGTaGCCCCAGTGCCCCAATGTACCTTTGCAAACACTTGTTGAACGC +
Preference number: 5 (lower is better)
Translates to: PLPAHQTRDIVTDHS*PQCPNVPLQTLVER
Trigger: GCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCACGAGTGATCTGTGACAATATCCCTGGTTTGGTGAGCCGGCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS GCA 90 bp GCTCACCAAACCAGGGATATTGTCACAGATCACTCGTGCCCCCAGTaGCCCAATGTACCTGCAAGGCAGAGATGGCCCTGTCAGAACATC +
Preference number: 5 (lower is better)
Translates to: AHQTRDIVTDHSCPQ*PNVPARQRWPCQNI
Trigger: GATGTTCTGACAGGGCCATCTCTGCCTTGCAGGTACATTGGGGCACTGGGGGCACGAGTGATCTGTGACAATATCCCTGGTTTGGTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478360.1
CDS-3UTR CAA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCGGGCTGCGGTGAAGTaGGCACCATCTTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNRAAVK*APSWVA
Trigger: GGCCACCCAAGATGGTGCCAACTTCACCGCAGCCCG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCTTGTGCTTTTGAGTaGAGAGGCTTGAATTGGAGG +
Preference number: 5 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGSCAFE*RGLNWR
Trigger: CCTCCAATTCAAGCCTCTCAACTCAAAAGCACAAGA...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCTTAATCCCACCATaGGCTCATCAGTTATCCAGT +
Preference number: 5 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGSLIPP*AHQLSS
Trigger: ACTGGATAACTGATGAGCCAATGGTGGGATTAAGGA...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS TCA 90 bp TGGGCAGACCATGCCCTTTCCTGTCGAGTTCCTGCTTACTTCTCCTaGTCTAGACTTCCATCCCAGGCTTCTCACCAGAAACACGGTGCC +
Preference number: 5 (lower is better)
Translates to: WADHALSCRVPAYFS*SRLPSQASHQKHGA
Trigger: GGCACCGTGTTTCTGGTGAGAAGCCTGGGATGGAAGTCTAGATCAGGAGAAGTAAGCAGGAACTCGACAGGAAAGGGCATGGTCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGCGGTGGTGGCGGAATaGGTGCTGACACTCTCGGAT +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCAVVAE*VLTLSD
Trigger: ATCCGAGAGTGTCAGCACCAATTCCGCCACCACCGC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS TCA 90 bp TGCCCCCAGTGCCCCAATGTACCTTTGCAAACACTTGTTGAACGCTaGCTGTGTAGGTATGCCAGGTACTGCCGTCCTCAAGGATCCTTC +
Preference number: 5 (lower is better)
Translates to: CPQCPNVPLQTLVER*LCRYARYCRPQGSF
Trigger: GAAGGATCCTTGAGGACGGCAGTACCTGGCATACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS CCA 90 bp CAGGTTTGGTCCAGCCACTCTGCCTTCTTGGGGGCTTTGCAAGTATaGACGTCCACAGTATTTCTGCATTCCTTGCACCGTACAGCACAG +
Preference number: 5 (lower is better)
Translates to: QVWSSHSAFLGALQV*TSTVFLHSLHRTAQ
Trigger: CTGTGCTGTACGGTGCAAGGAATGCAGAAATACTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGTGGGCTCTTCAGGGTTaGGAAGGGGCCATGCCAGTG +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKWALQG*EGAMPV
Trigger: CACTGGCATGGCCCCTTCCAAACCCTGAAGAGCCCA...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCTTAAGCCTCTTCTCCTaGGCATCCACGAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGLSLFS*ASTKAL
Trigger: CAAGGCCTTCGTGGATGCCAAGGAGAAGAGGCTTAA...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCGTTCCTTTTGATGTCTaGCTGCAGACACGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGVPFDV*LQTRPA
Trigger: TGCAGGCCGTGTCTGCAGCAAGACATCAAAAGGAAC...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCTGTACGCCCAGCACTTaGGAAGGCTGCAGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPCTPST*EGCSGR
Trigger: CCTCCCACTGCAGCCTTCCAAAGTGCTGGGCGTACA...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCACACCCCACTGGCTATaGCCCTATACCTGCCAATCA +
Preference number: 5 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPTPHWL*PYTCQS
Trigger: TGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGT...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGCGGTGGTGGCGGAATaGGTGCTGACACTCTCGGAT +
Preference number: 5 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQAVVAE*VLTLSD
Trigger: ATCCGAGAGTGTCAGCACCAATTCCGCCACCACCGC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCGGCACGGCGATAGCCTaGGCGGGCTGCGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLGTAIA*AGCGEV
Trigger: AACTTCACCGCAGCCCGCCAAGGCTATCGCCGTGCC...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCGTATTTCTGCATTCCTaGCACCGTACAGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGVFLHS*HRTAQH
Trigger: GTGCTGTGCTGTACGGTGCAAGGAATGCAGAAATAC...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGCCTTCTTGGGGGCTTaGCAAGTATGGACGTCCACA +
Preference number: 5 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKAFLGA*QVWTST
Trigger: TGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTTTCGCCCCAGCTAGCTaGAGCTTCTGCCCTATGACC +
Preference number: 5 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSFAPAS*SFCPMT
Trigger: GGTCATAGGGCAGAAGCTCAAGCTAGCTGGGGCGAA...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCATTGCTTGCATCAGCTaGAGATCCCAGGACCTTTGC +
Preference number: 5 (lower is better)
Translates to: QGILLTPHWLLPYTCQSPIACIS*RSQDLC
Trigger: GCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAAT...GGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGGTTTCTCTGCAGGATaGAGACCCCTTGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKGFSAG*RPLALV
Trigger: CACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACC...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTGTTGCTTCTGTATATaGTCACCCAGTAAGCATAAT +
Preference number: 5 (lower is better)
Translates to: LRRTLCLAPLSTRPRRPGCCFCI*SPSKHN
Trigger: ATTATGCTTACTGGGTGACAATATACAGAAGCAACA...CCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS GCA 90 bp CAATTCAGGCTTCCAGTGGCCCACCAAATAAGGGCACAAATTCTTTaGCTGGGCAGACCATGCCCTTTCCTGTCGAGTTCCTGCTTACTT +
Preference number: 5 (lower is better)
Translates to: QFRLPVAHQIRAQIL*LGRPCPFLSSSCLL
Trigger: AAGTAAGCAGGAACTCGACAGGAAAGGGCATGGTCTGCCCAGGCAAAGAATTTGTGCCCTTATTTGGTGGGCCACTGGAAGCCTGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS GCA 90 bp TGTGTGTTCAGGTTTGGTCCAGCCACTCTGCCTTCTTGGGGGCTTTaGAAGTATGGACGTCCACAGTATTTCTGCATTCCTTGCACCGTA +
Preference number: 5 (lower is better)
Translates to: CVFRFGPATLPSWGL*KYGRPQYFCIPCTV
Trigger: TACGGTGCAAGGAATGCAGAAATACTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCTGAACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 90 bp GGGATGAGTGAGGTATCTGTGTGTTCAGGTTTGGTCCAGCCACTCTaGCTTCTTGGGGGCTTTGCAAGTATGGACGTCCACAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: GMSEVSVCSGLVQPL*LLGGFASMDVHSIS
Trigger: AGAAATACTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCTGAACACACAGATACCTCACTCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS CCA 90 bp TCCACAGTATTTCTGCATTCCTTGCACCGTACAGCACAGCACCAGTaGAATTTGCACTCACACTGGGTAACACGGGTGACTCGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: STVFLHSLHRTAQHQ*NLHSHWVTRVTRVV
Trigger: CACAACTCGAGTCACCCGTGTTACCCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGTACGGTGCAAGGAATGCAGAAATACTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCAACCGTCTGTTCCTTTaGATGTCTTGCTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGNRLFL*MSCCRH
Trigger: GTGTCTGCAGCAAGACATCAAAAGGAACAGACGGTT...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGCCTCATGTGGGCCCTaGAGATCAGACCTGCTTACC +
Preference number: 5 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQASCGP*RSDLLT
Trigger: GGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGGC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCTCTGGTGCTGTAATTaGGCTGCAGGAGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNLWCCN*AAGARL
Trigger: CAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCTGGCATGAACCAGCCTaGCGAACTTATACAGTCTCA +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGWHEPA*RTYTVS
Trigger: TGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCCA...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTCGCATGTGTTCAGGGTaGGCCTCCACCTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCRMCSG*ASTSAC
Trigger: ACATGCTGAGGTGGAGGCCAACCCTGAACACATGCG...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTACGCATGTGTTCAGGGTaGGCCTCCACCTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVRMCSG*ASTSAC
Trigger: ACATGCTGAGGTGGAGGCCAACCCTGAACACATGCG...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCGAGAGGGGCGCAAGTaGCGATGTCCGGAAGCCGAC +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHREGRK*RCPEAD
Trigger: GTCGGCTTCCGGACATCGCAACTTGCGCCCCTCTCG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS CCA 90 bp TCTAGACTTCCATCCCAGGCTTCTCACCAGAAACACGGTGCCTGCTaGCAACTTGGTGCACTGTATATGCTATCCTCATTCCTTGGAATG +
Preference number: 5 (lower is better)
Translates to: SRLPSQASHQKHGAC*QLGALYMLSSFLGM
Trigger: CATTCCAAGGAATGAGGATAGCATATACAGTGCACCAAGTTGCCAGCAGGCACCGTGTTTCTGGTGAGAAGCCTGGGATGGAAGTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCACTGCGTTTCATGTTaGTCTCTCCCACCAGCACCT +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKHCVSC*SLPPAP
Trigger: AGGTGCTGGTGGGAGAGACAAACATGAAACGCAGTG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGAGTGCCTGCTGGCAACTaGGTGCACTGTATATGCTAT +
Preference number: 5 (lower is better)
Translates to: VPFLLHTKKYREAGAKERVPAGN*VHCICY
Trigger: ATAGCATATACAGTGCACCAAGTTGCCAGCAGGCAC...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAAAGGGCACAAATTCTTaGCCTGGGCAGACCATGCCC +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIKGTNS*PGQTMP
Trigger: GGGCATGGTCTGCCCAGGCAAAGAATTTGTGCCCTT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCACCAAACCAGGGATATaGTCACAGATCACTCGTGCC +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCTKPGI*SQITRA
Trigger: GGCACGAGTGATCTGTGACAATATCCCTGGTTTGGT...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATGCGGTGGTGGCGGAATaGGTGCTGACACTCTCGGAT +
Preference number: 5 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYAVVAE*VLTLSD
Trigger: ATCCGAGAGTGTCAGCACCAATTCCGCCACCACCGC...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCTTAAGCCTCTTCTCCTaGGCATCCACGAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPLSLFS*ASTKAL
Trigger: CAAGGCCTTCGTGGATGCCAAGGAGAAGAGGCTTAA...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGTTCCTTTTGATGTCTaGCTGCAGACACGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSVPFDV*LQTRPA
Trigger: TGCAGGCCGTGTCTGCAGCAAGACATCAAAAGGAAC...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGCCTTCTTGGGGGCTTaGCAAGTATGGACGTCCACA +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIAFLGA*QVWTST
Trigger: TGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCTCTTGTGCTTTTGAGTaGAGAGGCTTGAATTGGAGG +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGSCAFE*RGLNWR
Trigger: CCTCCAATTCAAGCCTCTCAACTCAAAAGCACAAGA...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCACATGCCATTCATCTTaGTCCCATCTAACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGTCHSS*SHLTLA
Trigger: GGCCAAAGTTAGATGGGACAAAGATGAATGGCATGT...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTGTACGCCCAGCACTTaGGAAGGCTGCAGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: VAHFSELVTPTGISRNCYCTPST*EGCSGR
Trigger: CCTCCCACTGCAGCCTTCCAAAGTGCTGGGCGTACA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGTGGCATGAACCAGCCTaGCGAACTTATACAGTCTCA +
Preference number: 5 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLWHEPA*RTYTVS
Trigger: TGAGACTGTATAAGTTCGCAAGGCTGGTTCATGCCA...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGTCTATCCCTTTACCTTaGAGGTCAGGGACAGGGCAT +
Preference number: 5 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLSIPLP*RSGTGH
Trigger: ATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGGGAGAATGCTTGCCTaGCATTTGCACATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLGRMLA*HLHIQN
Trigger: ATTCTGGATGTGCAAATGCAAGGCAAGCATTCTCCC...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCCAGTGGGAGAATGCTaGCCTTGCATTTGCACATCC +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKPVGEC*PCICTS
Trigger: GGATGTGCAAATGCAAGGCAAGCATTCTCCCACTGG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGTCAAGTCACCGCATTTaGGCTCCTTTGGTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: RELAQFLISPDNSFPGLRSSHRI*APLVKE
Trigger: CTCTTTGACCAAAGGAGCCAAAATGCGGTGACTTGA...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGAGGCATCTGTCTGGCTaGGGATGGGAGTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKRHLSG*GWEFLR
Trigger: CCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCT...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCTTAAGAAAAAGCCTCTaGCAAGAAGCCATGACCTCG +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGLRKSL*QEAMTS
Trigger: CGAGGTCATGGCTTCTTGCAAGAGGCTTTTTCTTAA...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS TCA 90 bp GGATCTTGTGCTTTTGAGTTGAGAGGCTTGAATTGGAGGGATGAGTaGGGTATCTGTGTGTTCAGGTTTGGTCCAGCCACTCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GSCAFELRGLNWRDE*GICVFRFGPATLPS
Trigger: AGAAGGCAGAGTGGCTGGACCAAACCTGAACACACAGATACCTCACTCATCCCTCCAATTCAAGCCTCTCAACTCAAAAGCACAAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 90 bp GCTGGCAACTTGGTGCACTGTATATGCTATCCTCATTCCTTGGAATaGCCTTCATTCTCTTCTTCACCTGGGAGCATCTACCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AGNLVHCICYPHSLE*PSFSSSPGSIYLSF
Trigger: GAAGGAGAGGTAGATGCTCCCAGGTGAAGAAGAGAATGAAGGGCATTCCAAGGAATGAGGATAGCATATACAGTGCACCAAGTTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS GCA 90 bp ATATTGTCACAGATCACTCGTGCCCCCAGTGCCCCAATGTACCTTTaGAAACACTTGTTGAACGCTGACTGTGTAGGTATGCCAGGTACT +
Preference number: 5 (lower is better)
Translates to: ILSQITRAPSAPMYL*KHLLNADCVGMPGT
Trigger: AGTACCTGGCATACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCACGAGTGATCTGTGACAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS CCA 90 bp TGCCTGCTGGCAACTTGGTGCACTGTATATGCTATCCTCATTCCTTaGAATGCCCTTCATTCTCTTCTTCACCTGGGAGCATCTACCTCT +
Preference number: 5 (lower is better)
Translates to: CLLATWCTVYAILIP*NALHSLLHLGASTS
Trigger: AGAGGTAGATGCTCCCAGGTGAAGAAGAGAATGAAGGGCATTCCAAGGAATGAGGATAGCATATACAGTGCACCAAGTTGCCAGCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCGAAGTTGGCACCATCTaGGGTGGCCATCACCTGCAC +
Preference number: 5 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLEVGTI*GGHHLH
Trigger: GTGCAGGTGATGGCCACCCAAGATGGTGCCAACTTC...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGTTCCTTTTGATGTCTaGCTGCAGACACGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIVPFDV*LQTRPA
Trigger: TGCAGGCCGTGTCTGCAGCAAGACATCAAAAGGAAC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTAACCGTCTGTTCCTTTaGATGTCTTGCTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: ENLLSASSHGFLCRIETPNRLFL*MSCCRH
Trigger: GTGTCTGCAGCAAGACATCAAAAGGAACAGACGGTT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGTATTTCTGCATTCCTaGCACCGTACAGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSVFLHS*HRTAQH
Trigger: GTGCTGTGCTGTACGGTGCAAGGAATGCAGAAATAC...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCTGTGTGTTCAGGTTaGGTCCAGCCACTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLISVCSG*VQPLCL
Trigger: AAGGCAGAGTGGCTGGACCAAACCTGAACACACAGA...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATACAGGTACCCTTCCTCTaGCACACCAAGAAGTATCGG +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIQVPFL*HTKKYR
Trigger: CCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTG...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCGCCTCATGTGGGCCCTaGAGATCAGACCTGCTTACC +
Preference number: 5 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLASCGP*RSDLLT
Trigger: GGTAAGCAGGTCTGATCTCAAGGGCCCACATGAGGC...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCGATCTACAAGAAGTTTaGCAAACAGACCCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGDLQEV*QTDPQG
Trigger: GCCCTGAGGGTCTGTTTGCAAAACTTCTTGTAGATC...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCCAGGAATGCATCACATaGTTCTCTGGTGCTGTAATT +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGQECIT*FSGAVI
Trigger: AATTACAGCACCAGAGAACAATGTGATGCATTCCTG...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCTCTTGTTATCCAACATaGCTTCAAAGATGCCCAACC +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGSCYPT*LQRCPT
Trigger: GGTTGGGCATCTTTGAAGCAATGTTGGATAACAAGA...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCTCAGCCACTCTGCTTaGATGGTAATTCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: ENLLSASSHGFLCRIETPLSHSA*MVILHH
Trigger: GTGGTGAAGAATTACCATCAAAGCAGAGTGGCTGAG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAATCAAGTCACCGCATTTaGGCTCCTTTGGTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: RYPSSCTPRSIGKLVQRKSSHRI*APLVKE
Trigger: CTCTTTGACCAAAGGAGCCAAAATGCGGTGACTTGA...TTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCAAAAGAGCCATTGGTaGATAAGGTTCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPQKSHW*IRFRRA
Trigger: GGCCCTCCTGAACCTTATCAACCAATGGCTCTTTTG...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGATGGCAAAAGAGCCATaGGTTGATAAGGTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLMAKEP*VDKVQE
Trigger: CTCCTGAACCTTATCAACCAATGGCTCTTTTGCCAT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGACAGAGGTCCAGATTTaGGATGGGAAAACAAAGAGG +
Preference number: 5 (lower is better)
Translates to: VPPTCPGMHHIVLWCCNLTEVQI*DGKTKR
Trigger: CCTCTTTGTTTTCCCATCCAAAATCTGGACCTCTGT...CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGTGCATACGTCATCTTTaGGAGCTGCTCTTACTCACT +
Preference number: 5 (lower is better)
Translates to: RELAQFLISPDNSFPGLRCIRHL*ELLLLT
Trigger: AGTGAGTAAGAGCAGCTCCAAAAGATGACGTATGCA...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGACAGAAGAGTTCCCCTaGCATACGTCATCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: RELAQFLISPDNSFPGLRTEEFP*HTSSFG
Trigger: TCCAAAAGATGACGTATGCAAGGGGAACTCTTCTGT...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCCAAATGGACTCATCCTaGTGCTTTTCCATAGGTGCC +
Preference number: 5 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGQMDSS*CFSIGA
Trigger: GGCACCTATGGAAAAGCACAAGGATGAGTCCATTTG...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCAACCTCATTAGCTTCTaGGTAAATGTGCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCNLISF*VNVPVL
Trigger: GAGCACAGGCACATTTACCAAGAAGCTAATGAGGTT...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp CTCTCAATAATAGAATGTGGTAGCCTAAGATTTTCTTTCGGGGTACCAGGTAGTGAAGTTGGCACCATCTaGGGTGGCCATCACCTGCAC +
Preference number: 5 (lower is better)
Translates to: LSIIECGSLRFSFGVPGSEVGTI*GGHHLH
Trigger: GTGCAGGTGATGGCCACCCAAGATGGTGCCAACTTC...ACTACCTGGTACCCCGAAAGAAAATCTTAGGCTACCACATTCTATTATTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAGAAGTTGGCACCATCTaGGGTGGCCATCACCTGCAC +
Preference number: 5 (lower is better)
Translates to: DMPFIFVPSNFGQVETKREVGTI*GGHHLH
Trigger: GTGCAGGTGATGGCCACCCAAGATGGTGCCAACTTC...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATAACCGTCTGTTCCTTTaGATGTCTTGCTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNNRLFL*MSCCRH
Trigger: GTGTCTGCAGCAAGACATCAAAAGGAACAGACGGTT...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTCATGTGAATGGAACCTaGTCCACTATGGCTAACATC +
Preference number: 5 (lower is better)
Translates to: ENLLSASSHGFLCRIETPHVNGT*STMANI
Trigger: GATGTTAGCCATAGTGGACAAGGTTCCATTCACATG...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCCCCACCATCCATGAGTaGCCTATCTTTCTTTTACTC +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCPTIHE*PIFLLL
Trigger: GAGTAAAAGAAAGATAGGCAACTCATGGATGGTGGG...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGGCGGCTCTGCAGGATaGCTTACGGAGAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHGGSAG*LTENSV
Trigger: CACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCGGAAGCATCTCTTTCTaGTTATCCAACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGGSISF*LSNIAS
Trigger: TGAAGCAATGTTGGATAACAAGAAAGAGATGCTTCC...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTCAGCCACTCTGCTTaGATGGTAATTCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPLSHSA*MVILHH
Trigger: GTGGTGAAGAATTACCATCAAAGCAGAGTGGCTGAG...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTAGTGGGAAAATGAGTTaGTCAACGCCCTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: ENLLSASSHGFLCRIETPSGKMS*STPSLF
Trigger: GAAAAGAGAGGGCGTTGACAAACTCATTTTCCCACT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGAGTGGGAAAATGAGTTaGTCAACGCCCTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLSGKMS*STPSLF
Trigger: GAAAAGAGAGGGCGTTGACAAACTCATTTTCCCACT...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCGGGAGAATGCTTGCCTaGCATTTGCACATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPGRMLA*HLHIQN
Trigger: ATTCTGGATGTGCAAATGCAAGGCAAGCATTCTCCC...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAACCAGTGGGAGAATGCTaGCCTTGCATTTGCACATCC +
Preference number: 5 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREPVGEC*PCICTS
Trigger: GGATGTGCAAATGCAAGGCAAGCATTCTCCCACTGG...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGGGCATCCTCAGGCTTaGAGGAGAATACACAGGATT +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIGHPQA*RRIHRI
Trigger: AATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCCC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGTATCAATTTCTGTTTaGAAGGTGCTGGGACTCTGG +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCVSISV*KVLGLW
Trigger: CCAGAGTCCCAGCACCTTCAAAACAGAAATTGATAC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCATGGCAAAAGAGCCATaGGTTGATAAGGTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCMAKEP*VDKVQE
Trigger: CTCCTGAACCTTATCAACCAATGGCTCTTTTGCCAT...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GGAGGGTGGAGGAAGGTGTGCATGCAAGGATCTTGTGCTTTTGAGTTGAGAGGCTTCCTAACCCAGGAGTaGACGTCATTTTTAAAAGGA +
Preference number: 5 (lower is better)
Translates to: GGWRKVCMQGSCAFELRGFLTQE*TSFLKG
Trigger: TCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAA...GCCTCTCAACTCAAAAGCACAAGATCCTTGCATGCACACCTTCCTCCACCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATACTCTTACTCACTGTCTaGCGCCTAAACAGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLILLLTV*RLNRGP
Trigger: TGGACCTCTGTTTAGGCGCAAGACAGTGAGTAAGAG...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCAAATGGACTCATCCTaGTGCTTTTCCATAGGTGCC +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKQMDSS*CFSIGA
Trigger: GGCACCTATGGAAAAGCACAAGGATGAGTCCATTTG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTATTACTTCTCTAGCTaGTCGCTCACTTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGYYFSS*SLTSLS
Trigger: GCTCAGAGAAGTGAGCGACAAGCTAGAGAAGTAATA...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS TCA 90 bp CACAGTGCCTGGCACCTAGTAGGAACTGTGGCATGGATATTTCAATaGAGAAAATCTCTTTGTTTTCCTCCCAGAGTGCTGGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: HSAWHLVGTVAWIFQ*RKSLCFPPRVLALA
Trigger: AGCAAGAGCCAGCACTCTGGGAGGAAAACAAAGAGATTTTCTTCATTGAAATATCCATGCCACAGTTCCTACTAGGTGCCAGGCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS TCA 90 bp GGTATGCCAGGTACTGCCGTCCTCAAGGATCCTTCAGTTTTTAGTTaGATTCCAAAAATGCTTATGGCTACCACTCCAAGGCCATCCAAC +
Preference number: 5 (lower is better)
Translates to: GMPGTAVLKDPSVFS*IPKMLMATTPRPSN
Trigger: GTTGGATGGCCTTGGAGTGGTAGCCATAAGCATTTTTGGAATTCAACTAAAAACTGAAGGATCCTTGAGGACGGCAGTACCTGGCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGTGCTATCCTCATTCCTaGGAATGCCCTTCATTCTCT +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKCYPHS*ECPSFS
Trigger: AGAGAATGAAGGGCATTCCAAGGAATGAGGATAGCA...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTTAAGCCTCTTCTCCTaGGCATCCACGAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFLSLFS*ASTKAL
Trigger: CAAGGCCTTCGTGGATGCCAAGGAGAAGAGGCTTAA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTCTGTGTGTTCAGGTTaGGTCCAGCCACTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFSVCSG*VQPLCL
Trigger: AAGGCAGAGTGGCTGGACCAAACCTGAACACACAGA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGGGAAATCAGGGAGCTaGCTCAGTTTCTTATATCCC +
Preference number: 5 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQGKSGS*LSFLYP
Trigger: GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAGGGAAATCAGGGAGCTaGCTCAGTTTCTTATATCCC +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIGKSGS*LSFLYP
Trigger: GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCC...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATCAGGTACCCTTCCTCTaGCACACCAAGAAGTATCGG +
Preference number: 5 (lower is better)
Translates to: VAHFSELVTPTGISRNCYQVPFL*HTKKYR
Trigger: CCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTG...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTTTGCAAACACTTGTaGAACGCTGACTGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPLCKHL*NADCVG
Trigger: ACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAG...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS-3UTR CAA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAATGCCCCAATGTACCTTaGCAAACACTTGTTGAACGC +
Preference number: 5 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQCPNVP*QTLVER
Trigger: GCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCA...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCCCACCATCCATGAGTaGCCTATCTTTCTTTTACTC +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKPTIHE*PIFLLL
Trigger: GAGTAAAAGAAAGATAGGCAACTCATGGATGGTGGG...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CTAAGATTTTCTTTCGGGGTACCAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGACCCCAAGGGATATaGGAGAGGAACTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LRFSFGVPGSSAQTDFREGPQGI*ERNFGK
Trigger: CTTTCCAAAGTTCCTCTCCAATATCCCTTGGGGTCC...TTCTCTGAAGTCCGTTTGAGCAGAACTACCTGGTACCCCGAAAGAAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGGGAAAAATTAATTGCTaGGCCATCATTCCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: RELAQFLISPDNSFPGLRGKINC*AIIPFG
Trigger: CCCAAAAGGAATGATGGCCAAGCAATTAATTTTTCC...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCCAGACTAAATGCCAGTaGTGTAAAGCCAATCAATGC +
Preference number: 5 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGQTKCQ*CKANQC
Trigger: GCATTGATTGGCTTTACACAACTGGCATTTAGTCTG...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGATCTACAAGAAGTTTaGCAAACAGACCCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQDLQEV*QTDPQG
Trigger: GCCCTGAGGGTCTGTTTGCAAAACTTCTTGTAGATC...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGCAAAGACTTACTGGTaGGTGTTCTTGATAAGGGAA +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCAKTYW*VFLIRE
Trigger: TTCCCTTATCAAGAACACCAACCAGTAAGTCTTTGC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGGCAAAGACTTACTGGTaGGTGTTCTTGATAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLAKTYW*VFLIRE
Trigger: TTCCCTTATCAAGAACACCAACCAGTAAGTCTTTGC...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCTCTGGTGCTGTAATTaGGCTGCAGGAGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYLWCCN*AAGARL
Trigger: CAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGGCGGCTCTGCAGGATaGCTTACGGAGAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRGGSAG*LTENSV
Trigger: CACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGTCTTGTTATCCAACATaGCTTCAAAGATGCCCAACC +
Preference number: 5 (lower is better)
Translates to: SIPLPLRSGTGHITDTPLSCYPT*LQRCPT
Trigger: GGTTGGGCATCTTTGAAGCAATGTTGGATAACAAGA...CAGTGGGGTGTCAGTAATATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGGGAAGCATCTCTTTCTaGTTATCCAACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: RELAQFLISPDNSFPGLRGSISF*LSNIAS
Trigger: TGAAGCAATGTTGGATAACAAGAAAGAGATGCTTCC...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTACACCCCACTGGCTATaGCCCTATACCTGCCAATCA +
Preference number: 5 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYATPHWL*PYTCQS
Trigger: TGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATTCTTCCTCCAGCCTCTaGTGTCTACTTATTACACAC +
Preference number: 5 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNSSSSL*CLLITH
Trigger: GTGTGTAATAAGTAGACACAAGAGGCTGGAGGAAGA...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATACCAAACCAGGGATATaGTCACAGATCACTCGTGCC +
Preference number: 5 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYTKPGI*SQITRA
Trigger: GGCACGAGTGATCTGTGACAATATCCCTGGTTTGGT...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATACCAAACCAGGGATATaGTCACAGATCACTCGTGCC +
Preference number: 5 (lower is better)
Translates to: VAHFSELVTPTGISRNCYTKPGI*SQITRA
Trigger: GGCACGAGTGATCTGTGACAATATCCCTGGTTTGGT...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCGTATTTCTGCATTCCTaGCACCGTACAGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLVFLHS*HRTAQH
Trigger: GTGCTGTGCTGTACGGTGCAAGGAATGCAGAAATAC...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGCCTTCTTGGGGGCTTaGCAAGTATGGACGTCCACA +
Preference number: 5 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRAFLGA*QVWTST
Trigger: TGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATTCTGTGTGTTCAGGTTaGGTCCAGCCACTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYSVCSG*VQPLCL
Trigger: AAGGCAGAGTGGCTGGACCAAACCTGAACACACAGA...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCAGGTACCCTTCCTCTaGCACACCAAGAAGTATCGG +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHQVPFL*HTKKYR
Trigger: CCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGACATGCCATTCATCTTaGTCCCATCTAACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKTCHSS*SHLTLA
Trigger: GGCCAAAGTTAGATGGGACAAAGATGAATGGCATGT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCACATGCCATTCATCTTaGTCCCATCTAACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLQISRAGNQGACSVSYITCHSS*SHLTLA
Trigger: GGCCAAAGTTAGATGGGACAAAGATGAATGGCATGT...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATAAGCTGTGTATCACTTaGGCCCCAACCTGCAGTACT +
Preference number: 5 (lower is better)
Translates to: VAHFSELVTPTGISRNCYKLCIT*APTCST
Trigger: AGTACTGCAGGTTGGGGCCAAAGTGATACACAGCTT...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAATAGGACATCAAGTTTaGGGGGACTTCATGTCCTAC +
Preference number: 5 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVIGHQV*GDFMSY
Trigger: GTAGGACATGAAGTCCCCCAAAACTTGATGTCCTAT...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAATAGGACATCAAGTTTaGGGGGACTTCATGTCCTAC +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIIGHQV*GDFMSY
Trigger: GTAGGACATGAAGTCCCCCAAAACTTGATGTCCTAT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCGGACCCCAAGGGATATaGGAGAGGAACTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLGPQGI*ERNFGK
Trigger: CTTTCCAAAGTTCCTCTCCAATATCCCTTGGGGTCC...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CAGGTAGTTCTGCTCAAACGGACTTCAGAGAAGGGACATGCCATTCATCTTTGTTCCTTAATCCCACCATaGGCTCATCAGTTATCCAGT +
Preference number: 5 (lower is better)
Translates to: QVVLLKRTSEKGHAIHLCSLIPP*AHQLSS
Trigger: ACTGGATAACTGATGAGCCAATGGTGGGATTAAGGA...ACAAAGATGAATGGCATGTCCCTTCTCTGAAGTCCGTTTGAGCAGAACTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTGGCCATCATTCCTTTaGGGACCACATAACCTCCGT +
Preference number: 5 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFWPSFL*GPHNLR
Trigger: ACGGAGGTTATGTGGTCCCAAAAGGAATGATGGCCA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATCAGGAATGCATCACATaGTTCTCTGGTGCTGTAATT +
Preference number: 5 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNQECIT*FSGAVI
Trigger: AATTACAGCACCAGAGAACAATGTGATGCATTCCTG...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCTACTTACAGGGGCTGTaGGGGTTGAAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLYLQGL*GLKSSH
Trigger: GTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTA...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCGAGAATACACAGGATTaGAAGTCAGAAGACCTAGGT +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPENTQD*KSEDLG
Trigger: ACCTAGGTCTTCTGACTTCAAATCCTGTGTATTCTC...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCCAAAAGAGCCATTGGTaGATAAGGTTCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFQKSHW*IRFRRA
Trigger: GGCCCTCCTGAACCTTATCAACCAATGGCTCTTTTG...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCTAAGGTATTTTGAAGGCCTATaGATGACCTTTTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: RELAQFLISPDNSFPGLRYFEGL*MTFSVS
Trigger: GGAAACTGAAAAGGTCATCAATAGGCCTTCAAAATA...CCTTAGCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGTATTACTTCTCTAGCTaGTCGCTCACTTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKYYFSS*SLTSLS
Trigger: GCTCAGAGAAGTGAGCGACAAGCTAGAGAAGTAATA...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGGCTTATTATGGGTTTaGTATTTTACAGCATCGACA +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCGLLWV*YFTAST
Trigger: TGTCGATGCTGTAAAATACAAAACCCATAATAAGCC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCAATTTTACAACCACATaGCTTGGGCTCTTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: SLQISRAGNQGACSVSYINFTTT*LGLFRV
Trigger: AACCCTGAAGAGCCCAAGCAATGTGGTTGTAAAATT...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp AAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGGGGTGTTTTAATGATTaGTTAAGCATGGGAACCACT +
Preference number: 5 (lower is better)
Translates to: KEALYRYPSSCTPRSIGKGCFND*LSMGTT
Trigger: AGTGGTTCCCATGCTTAACAAATCATTAAAACACCC...CTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACTGGCCATCATTCCTTTaGGGACCACATAACCTCCGT +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHWPSFL*GPHNLR
Trigger: ACGGAGGTTATGTGGTCCCAAAAGGAATGATGGCCA...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAATCAGGGAGCTTGCTCAGTTTCTTATATCCCCTGACAACTCCTTCCCAGGGCCTATTGGTATCCTTTTaGAAGTACTGGATCGAAATC +
Preference number: 5 (lower is better)
Translates to: KSGSLLSFLYPLTTPSQGLLVSF*KYWIEI
Trigger: GATTTCGATCCAGTACTTCAAAAAGGATACCAATAG...GCCCTGGGAAGGAGTTGTCAGGGGATATAAGAAACTGAGCAAGCTCCCTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTACCCTTCCTCTTGCACACCAAGAAGTATCGGGAAGCTGGTGCAAAGGAAAGACTTTGTAGATATTCCTaGATTAAAGCCAGACCCTAT +
Preference number: 5 (lower is better)
Translates to: VPFLLHTKKYREAGAKERLCRYS*IKARPY
Trigger: ATAGGGTCTGGCTTTAATCAAGGAATATCTACAAAG...TCTTTCCTTTGCACCAGCTTCCCGATACTTCTTGGTGTGCAAGAGGAAGGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGATCTATCCCTTTACCTTaGAGGTCAGGGACAGGGCAT +
Preference number: 5 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRSIPLP*RSGTGH
Trigger: ATGCCCTGTCCCTGACCTCAAAGGTAAAGGGATAGA...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTTACTTACAGGGGCTGTaGGGGTTGAAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSYLQGL*GLKSSH
Trigger: GTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTA...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGGGCATCCTCAGGCTTaGAGGAGAATACACAGGATT +
Preference number: 5 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSGHPQA*RRIHRI
Trigger: AATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCCC...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAAGGCATCTGTCTGGCTaGGGATGGGAGTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRRHLSG*GWEFLR
Trigger: CCTAAGAAACTCCCATCCCAAGCCAGACAGATGCCT...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTATTGCTTGCATCAGCTaGAGATCCCAGGACCTTTGC +
Preference number: 5 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSIACIS*RSQDLC
Trigger: GCAAAGGTCCTGGGATCTCAAGCTGATGCAAGCAAT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCTCTTACTCACTGTCTaGCGCCTAAACAGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYLLLTV*RLNRGP
Trigger: TGGACCTCTGTTTAGGCGCAAGACAGTGAGTAAGAG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTTGCCTTGGTGTACACAAATATTAGTGAGCTGGTTTaGCAGTCTCTAAAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: HLMGFSAGLRPLALVYTNISELV*QSLKLF
Trigger: AAAGAGCTTTAGAGACTGCAAAACCAGCTCACTAAT...ATTTGTGTACACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACCCATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCCCAATATGGCACACGTTTaGGCTTATTCAGTGTACACA +
Preference number: 5 (lower is better)
Translates to: PSNLQSGKSGSLLSFLYPNMAHV*AYSVYT
Trigger: TGTGTACACTGAATAAGCCAAAACGTGTGCCATATT...GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTGCGTTGAATGTAAACCCTaGAGCTTTTCTTTTGTGAAG +
Preference number: 5 (lower is better)
Translates to: HCIPPQFEQAASKQKRQCVECKP*SFSFVK
Trigger: CTTCACAAAAGAAAAGCTCAAGGGTTTACATTCAAC...GCACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAAACCAGTTATACAAGTaGAGACTTCTGTCTCTATGC +
Preference number: 5 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPNQLYK*RLLSLC
Trigger: GCATAGAGACAGAAGTCTCAACTTGTATAACTGGTT...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAAATCTGCTGTCTGCCTCATCTCATGGGTTTCTCTGCAGGATTGAGACCCCTATAACATTTCCCTGGTaGCTTAACCAGTTATACAAG +
Preference number: 5 (lower is better)
Translates to: ENLLSASSHGFLCRIETPITFPW*LNQLYK
Trigger: CTTGTATAACTGGTTAAGCAACCAGGGAAATGTTAT...AGGGGTCTCAATCCTGCAGAGAAACCCATGAGATGAGGCAGACAGCAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAAGTAAGCAAAAGAGGCAGTCTGATTTGTAGCATATaGGTAAGGAGGCACATTCAT +
Preference number: 5 (lower is better)
Translates to: TTAFHLSLNRQQVSKRGSLICSI*VRRHIH
Trigger: ATGAATGTGCCTCCTTACCAATATGCTACAAATCAG...ACTGCCTCTTTTGCTTACTTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAACTCTTGCTTGCTTACTaGGCTTATTATGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQLLLAY*AYYGFC
Trigger: ACAAAACCCATAATAAGCCAAGTAAGCAAGCAAGAG...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTTCTTGTGCTTTTGAGTaGAGAGGCTTGAATTGGAGG +
Preference number: 5 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYASCAFE*RGLNWR
Trigger: CCTCCAATTCAAGCCTCTCAACTCAAAAGCACAAGA...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATCATGTGAATGGAACCTaGTCCACTATGGCTAACATC +
Preference number: 5 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYHVNGT*STMANI
Trigger: GATGTTAGCCATAGTGGACAAGGTTCCATTCACATG...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CTTCAGAGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGGGTGTTTTAATGATTaGTTAAGCATGGGAACCACT +
Preference number: 5 (lower is better)
Translates to: LQRRDMPFIFVPSNFGQVGCFND*LSMGTT
Trigger: AGTGGTTCCCATGCTTAACAAATCATTAAAACACCC...TACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCTCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCGGACTCCTACAGGGCTaGAACATTTTGTATCAATTT +
Preference number: 5 (lower is better)
Translates to: SLQISRAGNQGACSVSYIGLLQG*NILYQF
Trigger: AAATTGATACAAAATGTTCAAGCCCTGTAGGAGTCC...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCGGTTTCTCTGCAGGATaGAGACCCCTTGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAGFSAG*RPLALV
Trigger: CACCAAGGCAAGGGGTCTCAATCCTGCAGAGAAACC...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAAGTATTGCATACGTCATCTTTaGGAGCTGCTCTTACTCACT +
Preference number: 5 (lower is better)
Translates to: ETKRSSLQVPFLLHTKKYCIRHL*ELLLLT
Trigger: AGTGAGTAAGAGCAGCTCCAAAAGATGACGTATGCA...ATACTTCTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCTCTTCCTCCAGCCTCTaGTGTCTACTTATTACACAC +
Preference number: 5 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFSSSSL*CLLITH
Trigger: GTGTGTAATAAGTAGACACAAGAGGCTGGAGGAAGA...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TTGAGACCCCTTGCCTTGGTGTACACAAATTGCTTGCATCAGCTTGAGATCCCATGTTGCTTCTGTATATaGTCACCCAGTAAGCATAAT +
Preference number: 5 (lower is better)
Translates to: LRPLALVYTNCLHQLEIPCCFCI*SPSKHN
Trigger: ATTATGCTTACTGGGTGACAATATACAGAAGCAACA...TGGGATCTCAAGCTGATGCAAGCAATTTGTGTACACCAAGGCAAGGGGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATAATTAGTGAGCTGGTTTaGCAGTCTCTAAAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIISELV*QSLKLF
Trigger: AAAGAGCTTTAGAGACTGCAAAACCAGCTCACTAAT...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp CAGGTAGAAACAAAAAGAAGCTCTCTACAGGTACCCTTCCTCTTGCACACCAAGAATATGGCACACGTTTaGGCTTATTCAGTGTACACA +
Preference number: 5 (lower is better)
Translates to: QVETKRSSLQVPFLLHTKNMAHV*AYSVYT
Trigger: TGTGTACACTGAATAAGCCAAAACGTGTGCCATATT...CTTGGTGTGCAAGAGGAAGGGTACCTGTAGAGAGCTTCTTTTTGTTTCTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGGGAAATCAGGGAGCTaGCTCAGTTTCTTATATCCC +
Preference number: 5 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRGKSGS*LSFLYP
Trigger: GGGATATAAGAAACTGAGCAAGCTCCCTGATTTCCC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCATGTGAATGGAACCTaGTCCACTATGGCTAACATC +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHHVNGT*STMANI
Trigger: GATGTTAGCCATAGTGGACAAGGTTCCATTCACATG...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTTACTGGTTGGTGTTCTaGATAAGGGAAGTGAGACAA +
Preference number: 5 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAYWLVF*IREVRQ
Trigger: TTGTCTCACTTCCCTTATCAAGAACACCAACCAGTA...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAGTTTGAACAGGCAGCAACTTTGTAGATATTCCTaGATTAAAGCCAGACCCTAT +
Preference number: 5 (lower is better)
Translates to: DLLSMGTTAFHLSLNRQQLCRYS*IKARPY
Trigger: ATAGGGTCTGGCTTTAATCAAGGAATATCTACAAAG...TTGCTGCCTGTTCAAACTGAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAAAAAGAACAGAGGTCCAGATTTaGGATGGGAAAACAAAGAGG +
Preference number: 5 (lower is better)
Translates to: DMPFIFVPSNFGQVETKRTEVQI*DGKTKR
Trigger: CCTCTTTGTTTTCCCATCCAAAATCTGGACCTCTGT...TCTTTTTGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACACAGAAGAGTTCCCCTaGCATACGTCATCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHTEEFP*HTSSFG
Trigger: TCCAAAAGATGACGTATGCAAGGGGAACTCTTCTGT...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCTCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATATTTTGAAGGCCTATaGATGACCTTTTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: SPFKSPEREIRELAQFLIYFEGL*MTFSVS
Trigger: GGAAACTGAAAAGGTCATCAATAGGCCTTCAAAATA...TATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TCCCTTCAAATCTCCAGAGCGGGAAATCAGGGAGCTTGCTCAGTTTCTTATATCATAACATTTCCCTGGTaGCTTAACCAGTTATACAAG +
Preference number: 5 (lower is better)
Translates to: SLQISRAGNQGACSVSYIITFPW*LNQLYK
Trigger: CTTGTATAACTGGTTAAGCAACCAGGGAAATGTTAT...GATATAAGAAACTGAGCAAGCTCCCTGATTTCCCGCTCTGGAGATTTGAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCAAGCTGTGTATCACTTaGGCCCCAACCTGCAGTACT +
Preference number: 5 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAKLCIT*APTCST
Trigger: AGTACTGCAGGTTGGGGCCAAAGTGATACACAGCTT...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGAAGGGACATGCCATTCATCTTTGTCCCATCTAACTTTGGCCAGGTAGAAACAACTGTTCATGTGACCTaGGACAAATCACCAAATTTT +
Preference number: 5 (lower is better)
Translates to: RRDMPFIFVPSNFGQVETTVHVT*DKSPNF
Trigger: AAAATTTGGTGATTTGTCCAAGGTCACATGAACAGT...TGTTTCTACCTGGCCAAAGTTAGATGGGACAAAGATGAATGGCATGTCCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTCGCTCACTTCTCTGAGCTTGTCACACCTACTGGAATAAGCAGAAATTGTTATTTCCTAACCCAGGAGTaGACGTCATTTTTAAAAGGA +
Preference number: 5 (lower is better)
Translates to: VAHFSELVTPTGISRNCYFLTQE*TSFLKG
Trigger: TCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAA...ATAACAATTTCTGCTTATTCCAGTAGGTGTGACAAGCTCAGAGAAGTGAGCGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACCTCAACCAGTTATACAAGTaGAGACTTCTGTCTCTATGC +
Preference number: 5 (lower is better)
Translates to: VLGCFNDLLSMGTTAFHLNQLYK*RLLSLC
Trigger: GCATAGAGACAGAAGTCTCAACTTGTATAACTGGTT...GAGGTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTCTGATTTGTAGCATATaGGTAAGGAGGCACATTCAT +
Preference number: 5 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYALICSI*VRRHIH
Trigger: ATGAATGTGCCTCCTTACCAATATGCTACAAATCAG...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGGGTGTTTTAATGATTaGTTAAGCATGGGAACCACT +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHGCFND*LSMGTT
Trigger: AGTGGTTCCCATGCTTAACAAATCATTAAAACACCC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGGAAAAATTAATTGCTaGGCCATCATTCCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYGKINC*AIIPFG
Trigger: CCCAAAAGGAATGATGGCCAAGCAATTAATTTTTCC...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTACTGTTCATGTGACCTaGGACAAATCACCAAATTTT +
Preference number: 5 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYATVHVT*DKSPNF
Trigger: AAAATTTGGTGATTTGTCCAAGGTCACATGAACAGT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTGAAATCTCAAAGAGAGAATACACAGGATTaGAAGTCAGAAGACCTAGGT +
Preference number: 5 (lower is better)
Translates to: AFLTQELTSFLKGVKSQRENTQD*KSEDLG
Trigger: ACCTAGGTCTTCTGACTTCAAATCCTGTGTATTCTC...TCTTTGAGATTTCACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AGTGTTCTAGGGTGTTTTAATGATTTGTTAAGCATGGGAACCACTGCATTCCACGGACTCCTACAGGGCTaGAACATTTTGTATCAATTT +
Preference number: 5 (lower is better)
Translates to: SVLGCFNDLLSMGTTAFHGLLQG*NILYQF
Trigger: AAATTGATACAAAATGTTCAAGCCCTGTAGGAGTCC...GTGGAATGCAGTGGTTCCCATGCTTAACAAATCATTAAAACACCCTAGAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp GTTGACGTCCTATGGAAGGCATATGCCATTATTTATGTGGTAACCTGCATGTTCGTTGAATGTAAACCCTaGAGCTTTTCTTTTGTGAAG +
Preference number: 5 (lower is better)
Translates to: VDVLWKAYAIIYVVTCMFVECKP*SFSFVK
Trigger: CTTCACAAAAGAAAAGCTCAAGGGTTTACATTCAAC...GAACATGCAGGTTACCACATAAATAATGGCATATGCCTTCCATAGGACGTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp AAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTATCTTTTGGATGGCATaGAGAGTAACCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: KVTVTPTSQGCCEDYIYAIFWMA*RVTFCF
Trigger: AAAACAGAAGGTTACTCTCAATGCCATCCAAAAGAT...AGCATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp TGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATCTATTGGTATCCTTTTaGAAGTACTGGATCGAAATC +
Preference number: 5 (lower is better)
Translates to: CKVTVTPTSQGCCEDYIYLLVSF*KYWIEI
Trigger: GATTTCGATCCAGTACTTCAAAAAGGATACCAATAG...ATATATGTAATCCTCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCTTAAGAAAAAGCCTCTaGCAAGAAGCCATGACCTCG +
Preference number: 5 (lower is better)
Translates to: TIYRKLQNLHLYELEFGALRKSL*QEAMTS
Trigger: CGAGGTCATGGCTTCTTGCAAGAGGCTTTTTCTTAA...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ATTCCCTCATCTTGCTTTCCTAACCCAGGAGTTGACGTCATTTTTAAAAGGAGTATCTTTTGGATGGCATaGAGAGTAACCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: IPSSCFPNPGVDVIFKRSIFWMA*RVTFCF
Trigger: AAAACAGAAGGTTACTCTCAATGCCATCCAAAAGAT...ACTCCTTTTAAAAATGACGTCAACTCCTGGGTTAGGAAAGCAAGATGAGGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS-3UTR CAA 90 bp ACCATTTATAGGAAATTGCAAAACTTGCATCTTTATGAGCTAGAATTTGGAGCCCAGACTAAATGCCAGTaGTGTAAAGCCAATCAATGC +
Preference number: 5 (lower is better)
Translates to: TIYRKLQNLHLYELEFGAQTKCQ*CKANQC
Trigger: GCATTGATTGGCTTTACACAACTGGCATTTAGTCTG...GGCTCCAAATTCTAGCTCATAAAGATGCAAGTTTTGCAATTTCCTATAAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369684.5
ENST00000369686.9
CDS CCA 72 bp TCCGGAAGCCGACGACGGCGTGCCGAACCCGGGGTCTaGGGCGCGCTGCCTGAGGACCGGGTGCGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: SGSRRRRAEPGV*GALPEDRVRCQ
Trigger: CTGACACCGCACCCGGTCCTCAGGCAGCGCGCCCCAGACCCCGGGTTCGGCACGCCGTCGTCGGCTTCCGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS GCA 72 bp ACAGGGACCGGGGCGCTGGCGCGCCGAAGCGGGAGCTaGGCAGCTTCCTCCGCACCACCCGGTCTCAGCATA +
Preference number: 6 (lower is better)
Translates to: TGTGALARRSGS*AASSAPPGLSI
Trigger: TATGCTGAGACCGGGTGGTGCGGAGGAAGCTGCGCAGCTCCCGCTTCGGCGCGCCAGCGCCCCGGTCCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS GCA 72 bp GAGCCCGGGAGGAGGATCCCCGAGAGGGGCGCAAGTTaGGATGTCCGGAAGCCGACGACGGCGTGCCGAACC +
Preference number: 6 (lower is better)
Translates to: EPGRRIPERGAS*DVRKPTTACRT
Trigger: GGTTCGGCACGCCGTCGTCGGCTTCCGGACATCGCAACTTGCGCCCCTCTCGGGGATCCTCCTCCCGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS CAA 72 bp AGAGCCCGGGAGGAGGATCCCCGAGAGGGGCGCAAGTaGCGATGTCCGGAAGCCGACGACGGCGTGCCGAAC +
Preference number: 6 (lower is better)
Translates to: RAREEDPREGRK*RCPEADDGVPN
Trigger: GTTCGGCACGCCGTCGTCGGCTTCCGGACATCGCAACTTGCGCCCCTCTCGGGGATCCTCCTCCCGGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369684.5
CDS TCA 72 bp TCCGGGTGGCACGGCGATAGCCTTGGCGGGCTGCGGTaGAGTTGGCACCATCTTGGGTGGCCATCACCTGCA +
Preference number: 6 (lower is better)
Translates to: SGWHGDSLGGLR*SWHHLGWPSPA
Trigger: TGCAGGTGATGGCCACCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTATCGCCGTGCCACCCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS TCA 72 bp GGATCCATTCTCGGGCACCCTCGCCCACTGAACGCATaGTGTCTGGGTAACGCTGGCACAGCTGCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: GSILGHPRPLNA*CLGNAGTAAAA
Trigger: GGCAGCGGCAGCTGTGCCAGCGTTACCCAGACATCATGCGTTCAGTGGGCGAGGGTGCCCGAGAATGGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
ENST00000478360.1
CDS TCA 72 bp GCGTCGCCGCAGGTAATCACCTGTGCGGCGGAAATCTaGGAGTGCACGCCAGCAGGTGCGCAGAGTACAGGA +
Preference number: 6 (lower is better)
Translates to: ASPQVITCAAEI*ECTPAGAQSTG
Trigger: TCCTGTACTCTGCGCACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACAGGTGATTACCTGCGGCGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 72 bp CAGCCCCATCATAGCGTCGCCGCAGGTAATCACCTGTaGGGCGGAAATCTGAGAGTGCACGCCAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: QPHHSVAAGNHL*GGNLRVHASRC
Trigger: GCACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACAGGTGATTACCTGCGGCGACGCTATGATGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 72 bp CTGTGCGGCGGAAATCTGAGAGTGCACGCCAGCAGGTaGGCAGAGTACAGGAACCACTCACGCCATGGCACT +
Preference number: 6 (lower is better)
Translates to: LCGGNLRVHASR*AEYRNHSRHGT
Trigger: AGTGCCATGGCGTGAGTGGTTCCTGTACTCTGCGCACCTGCTGGCGTGCACTCTCAGATTTCCGCCGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS CAA 72 bp GTAGACAAGATCAGTCCGGGTGGCACGGCGATAGCCTaGGCGGGCTGCGGTGAAGTTGGCACCATCTTGGGT +
Preference number: 6 (lower is better)
Translates to: VDKISPGGTAIA*AGCGEVGTILG
Trigger: ACCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTATCGCCGTGCCACCCGGACTGATCTTGTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS TCA 72 bp ACACTCTCGGATCCATTCTCGGGCACCCTCGCCCACTaGACGCATGATGTCTGGGTAACGCTGGCACAGCTG +
Preference number: 6 (lower is better)
Translates to: TLSDPFSGTLAH*THDVWVTLAQL
Trigger: CAGCTGTGCCAGCGTTACCCAGACATCATGCGTTCAGTGGGCGAGGGTGCCCGAGAATGGATCCGAGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
ENST00000478360.1
CDS CAA 90 bp GTTGTCAAAGTAGACAAGATCAGTCCGGGTGGCACGGCGATAGCCTaGGCGGGCTGCGGTGAAGTTGGCACCATCTTGGGTGGCCATCAC +
Preference number: 6 (lower is better)
Translates to: VVKVDKISPGGTAIA*AGCGEVGTILGGHH
Trigger: GTGATGGCCACCCAAGATGGTGCCAACTTCACCGCAGCCCGCCAAGGCTATCGCCGTGCCACCCGGACTGATCTTGTCTACTTTGACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 72 bp CACAGATCACTCGTGCCCCCAGTGCCCCAATGTACCTaGAAGGCAGAGATGGCCCTGTCAGAACATCCCAGA +
Preference number: 6 (lower is better)
Translates to: HRSLVPPVPQCT*KAEMALSEHPR
Trigger: TCTGGGATGTTCTGACAGGGCCATCTCTGCCTTGCAGGTACATTGGGGCACTGGGGGCACGAGTGATCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478360.1
CDS CAA 72 bp TTCATGAGGGCCCGGGCATCCTTAAGCCTCTTCTCCTaGGCATCCACGAAGGCCTTGGCAAAACGGACACCG +
Preference number: 6 (lower is better)
Translates to: FMRARASLSLFS*ASTKALAKRTP
Trigger: CGGTGTCCGTTTTGCCAAGGCCTTCGTGGATGCCAAGGAGAAGAGGCTTAAGGATGCCCGGGCCCTCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
ENST00000478360.1
CDS GCA 72 bp GCTCACCAAACCAGGGATATTGTCACAGATCACTCGTaGCCCCAGTGCCCCAATGTACCTGCAAGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: AHQTRDIVTDHS*PQCPNVPARQR
Trigger: TCTCTGCCTTGCAGGTACATTGGGGCACTGGGGGCACGAGTGATCTGTGACAATATCCCTGGTTTGGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478360.1
CDS CAA 90 bp CAGATCACTCGTGCCCCCAGTGCCCCAATGTACCTTTGCAAACACTaGTTGAACGCTGACTGTGTAGGTATGCCAGGTACTGCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: QITRAPSAPMYLCKH*LNADCVGMPGTAVL
Trigger: GAGGACGGCAGTACCTGGCATACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCACGAGTGATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS GCA 72 bp CTTCCAGTGGCCCACCAAATAAGGGCACAAATTCTTTaGCTGGGCAGACCATGCCCTTTCCTGTCGAGTTCC +
Preference number: 6 (lower is better)
Translates to: LPVAHQIRAQIL*LGRPCPFLSSS
Trigger: GGAACTCGACAGGAAAGGGCATGGTCTGCCCAGGCAAAGAATTTGTGCCCTTATTTGGTGGGCCACTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS GCA 72 bp GAGGTATCTGTGTGTTCAGGTTTGGTCCAGCCACTCTaGCTTCTTGGGGGCTTTGCAAGTATGGACGTCCAC +
Preference number: 6 (lower is better)
Translates to: EVSVCSGLVQPL*LLGGFASMDVH
Trigger: GTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCTGAACACACAGATACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS CAA 72 bp GCCCCCAGTGCCCCAATGTACCTTTGCAAACACTTGTaGAACGCTGACTGTGTAGGTATGCCAGGTACTGCC +
Preference number: 6 (lower is better)
Translates to: APSAPMYLCKHL*NADCVGMPGTA
Trigger: GGCAGTACCTGGCATACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS CAA 90 bp ATCACTCGTGCCCCCAGTGCCCCAATGTACCTTTGCAAACACTTGTaGAACGCTGACTGTGTAGGTATGCCAGGTACTGCCGTCCTCAAG +
Preference number: 6 (lower is better)
Translates to: ITRAPSAPMYLCKHL*NADCVGMPGTAVLK
Trigger: CTTGAGGACGGCAGTACCTGGCATACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCACGAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS GCA 72 bp CTTCCATCCCAGGCTTCTCACCAGAAACACGGTGCCTaGTGGCAACTTGGTGCACTGTATATGCTATCCTCA +
Preference number: 6 (lower is better)
Translates to: LPSQASHQKHGA*WQLGALYMLSS
Trigger: TGAGGATAGCATATACAGTGCACCAAGTTGCCAGCAGGCACCGTGTTTCTGGTGAGAAGCCTGGGATGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS CCA 72 bp CCATCCCAGGCTTCTCACCAGAAACACGGTGCCTGCTaGCAACTTGGTGCACTGTATATGCTATCCTCATTC +
Preference number: 6 (lower is better)
Translates to: PSQASHQKHGAC*QLGALYMLSSF
Trigger: GAATGAGGATAGCATATACAGTGCACCAAGTTGCCAGCAGGCACCGTGTTTCTGGTGAGAAGCCTGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS CAA 72 bp CAGGTTTGGTCCAGCCACTCTGCCTTCTTGGGGGCTTaGCAAGTATGGACGTCCACAGTATTTCTGCATTCC +
Preference number: 6 (lower is better)
Translates to: QVWSSHSAFLGA*QVWTSTVFLHS
Trigger: GGAATGCAGAAATACTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS CAA 72 bp CGTGCCCCCAGTGCCCCAATGTACCTTTGCAAACACTaGTTGAACGCTGACTGTGTAGGTATGCCAGGTACT +
Preference number: 6 (lower is better)
Translates to: RAPSAPMYLCKH*LNADCVGMPGT
Trigger: AGTACCTGGCATACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS CAA 90 bp CTGTGTGTTCAGGTTTGGTCCAGCCACTCTGCCTTCTTGGGGGCTTaGCAAGTATGGACGTCCACAGTATTTCTGCATTCCTTGCACCGT +
Preference number: 6 (lower is better)
Translates to: LCVQVWSSHSAFLGA*QVWTSTVFLHSLHR
Trigger: ACGGTGCAAGGAATGCAGAAATACTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCTGAACACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS CAA 90 bp TTCCATCCCAGGCTTCTCACCAGAAACACGGTGCCTGCTGGCAACTaGGTGCACTGTATATGCTATCCTCATTCCTTGGAATGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: FHPRLLTRNTVPAGN*VHCICYPHSLECPS
Trigger: TGAAGGGCATTCCAAGGAATGAGGATAGCATATACAGTGCACCAAGTTGCCAGCAGGCACCGTGTTTCTGGTGAGAAGCCTGGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS CAA 90 bp TCAATTCAGGCTTCCAGTGGCCCACCAAATAAGGGCACAAATTCTTaGCCTGGGCAGACCATGCCCTTTCCTGTCGAGTTCCTGCTTACT +
Preference number: 6 (lower is better)
Translates to: SIQASSGPPNKGTNS*PGQTMPFPVEFLLT
Trigger: AGTAAGCAGGAACTCGACAGGAAAGGGCATGGTCTGCCCAGGCAAAGAATTTGTGCCCTTATTTGGTGGGCCACTGGAAGCCTGAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS GCA 72 bp AGGTTTGGTCCAGCCACTCTGCCTTCTTGGGGGCTTTaGAAGTATGGACGTCCACAGTATTTCTGCATTCCT +
Preference number: 6 (lower is better)
Translates to: RFGPATLPSWGL*KYGRPQYFCIP
Trigger: AGGAATGCAGAAATACTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS GCA 72 bp CAGATCACTCGTGCCCCCAGTGCCCCAATGTACCTTTaGAAACACTTGTTGAACGCTGACTGTGTAGGTATG +
Preference number: 6 (lower is better)
Translates to: QITRAPSAPMYL*KHLLNADCVGM
Trigger: CATACCTACACAGTCAGCGTTCAACAAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCACGAGTGATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS GCA 72 bp GCTCACCAAACCAGGGATATTGTCACAGATCACTCGTaGCCCCAGTGCCCCAATGTACCTTTGCAAACACTT +
Preference number: 6 (lower is better)
Translates to: AHQTRDIVTDHS*PQCPNVPLQTL
Trigger: AAGTGTTTGCAAAGGTACATTGGGGCACTGGGGGCACGAGTGATCTGTGACAATATCCCTGGTTTGGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS CCA 72 bp TGTGTGTTCAGGTTTGGTCCAGCCACTCTGCCTTCTTaGGGGCTTTGCAAGTATGGACGTCCACAGTATTTC +
Preference number: 6 (lower is better)
Translates to: CVFRFGPATLPS*GLCKYGRPQYF
Trigger: GAAATACTGTGGACGTCCATACTTGCAAAGCCCCCAAGAAGGCAGAGTGGCTGGACCAAACCTGAACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256640.9
ENST00000369684.5
ENST00000369686.9
CDS TCA 72 bp CATGCCCTTTCCTGTCGAGTTCCTGCTTACTTCTCCTaGTCTAGACTTCCATCCCAGGCTTCTCACCAGAAA +
Preference number: 6 (lower is better)
Translates to: HALSCRVPAYFS*SRLPSQASHQK
Trigger: TTTCTGGTGAGAAGCCTGGGATGGAAGTCTAGATCAGGAGAAGTAAGCAGGAACTCGACAGGAAAGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS GCA 72 bp TTCTCACCAGAAACACGGTGCCTGCTGGCAACTTGGTaGACTGTATATGCTATCCTCATTCCTTGGAATGCC +
Preference number: 6 (lower is better)
Translates to: FSPETRCLLATW*TVYAILIPWNA
Trigger: GGCATTCCAAGGAATGAGGATAGCATATACAGTGCACCAAGTTGCCAGCAGGCACCGTGTTTCTGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS CAA 72 bp AGGCTTCTCACCAGAAACACGGTGCCTGCTGGCAACTaGGTGCACTGTATATGCTATCCTCATTCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: RLLTRNTVPAGN*VHCICYPHSLE
Trigger: TTCCAAGGAATGAGGATAGCATATACAGTGCACCAAGTTGCCAGCAGGCACCGTGTTTCTGGTGAGAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS CAA 72 bp ATGGCCCTGTCAGAACATCCCAGACCTTTTTCTGCATaGGGAGGGAATAAGGAAGGGGTACGTTTAGCATCC +
Preference number: 6 (lower is better)
Translates to: MALSEHPRPFSA*GGNKEGVRLAS
Trigger: GGATGCTAAACGTACCCCTTCCTTATTCCCTCCCAATGCAGAAAAAGGTCTGGGATGTTCTGACAGGGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478360.1
CDS GCA 72 bp TTGGTGCACTGTATATGCTATCCTCATTCCTTGGAATaGCCTTCATTCTCTTCTTCACCTGGGAGCATCTAC +
Preference number: 6 (lower is better)
Translates to: LVHCICYPHSLE*PSFSSSPGSIY
Trigger: GTAGATGCTCCCAGGTGAAGAAGAGAATGAAGGGCATTCCAAGGAATGAGGATAGCATATACAGTGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS CAA 72 bp AGTGATGGGCCTCGAAGCTTAAACCTCATTAGCTTCTaGGTAAATGTGCCTGTGCTCATGATGCTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: SDGPRSLNLISF*VNVPVLMMLLN
Trigger: ATTGAGGAGCATCATGAGCACAGGCACATTTACCAAGAAGCTAATGAGGTTTAAGCTTCGAGGCCCATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256640.9
CDS TCA 72 bp GGTACTGCCGTCCTCAAGGATCCTTCAGTTTTTAGTTaGATTCCAAAAATGCTTATGGCTACCACTCCAAGG +
Preference number: 6 (lower is better)
Translates to: GTAVLKDPSVFS*IPKMLMATTPR
Trigger: CCTTGGAGTGGTAGCCATAAGCATTTTTGGAATTCAACTAAAAACTGAAGGATCCTTGAGGACGGCAGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369686.9
CDS CCA 72 bp CCCAATGTACTTTTAGTTGAATTCCAAAAATGCTTATaGCTACCACTCCAAGGCCATCCAACATGTGGGAAA +
Preference number: 6 (lower is better)
Translates to: PNVLLVEFQKCL*LPLQGHPTCGK
Trigger: TTTCCCACATGTTGGATGGCCTTGGAGTGGTAGCCATAAGCATTTTTGGAATTCAACTAAAAGTACATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256640.9