RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105989

Ensembl transcript IDs: ENST00000265441.8, ENST00000449446.5, ENST00000461427.1, ENST00000491214.1, ENST00000647844.1

Found 468 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAGTGGTCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATaGTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGA +
Preference number: 1 (lower is better)
Translates to: DSGLGPPPSRLNSLS*YFQRELARRGDDCR
Trigger: TCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGACCACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR GCA 90 bp AGCCTTGTCTCTGTCTCTAGATGCTGGTTTCTGCAGCAGCCTCTCTaGAACCTGAGGGCAGCAATGCCGACAGGCAGCAAGCTGCAGGCA +
Preference number: 1 (lower is better)
Translates to: SLVSVSRCWFLQQPL*NLRAAMPTGSKLQA
Trigger: TGCCTGCAGCTTGCTGCCTGTCGGCATTGCTGCCCTCAGGTTGCAGAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGAGACAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CCA 90 bp GCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTaGTCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTA +
Preference number: 1 (lower is better)
Translates to: ANCSRKKKRQGGWRQ*SGPTTLPAEQPVML
Trigger: TAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGACCACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR TCA 90 bp TTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTGGATGGTaGCGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTT +
Preference number: 1 (lower is better)
Translates to: FLQIQWSPCRREGGW*RLLGSCSGCPVSVL
Trigger: AAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTCACCATCCACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR TCA 90 bp CCTTCGCACTCTCATGAAGGAATTCACACCAACCTTCAGGGTAACTaGAGACTGAGCAGCTGCCCATGTGCCTGGCCTTCTTCACACCAA +
Preference number: 1 (lower is better)
Translates to: PSHSHEGIHTNLQGN*RLSSCPCAWPSSHQ
Trigger: TTGGTGTGAAGAAGGCCAGGCACATGGGCAGCTGCTCAGTCTTCAGTTACCCTGAAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 90 bp GGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTaGTTCATGACCACCTGGATGGCCCCATTGTACTTCCTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: GFLNLSLATVKPVPS*FMTTWMAPLYFLQR
Trigger: TCTCTGGAGGAAGTACAATGGGGCCATCCAGGTGGTCATGAACCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CCA 90 bp TTGTTTCAAGAACCGCTTTACAGCCTTGTCTCTGTCTCTAGATGCTaGTTTCTGCAGCAGCCTCTCTGCAACCTGAGGGCAGCAATGCCG +
Preference number: 1 (lower is better)
Translates to: LFQEPLYSLVSVSRC*FLQQPLCNLRAAMP
Trigger: CGGCATTGCTGCCCTCAGGTTGCAGAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGAGACAAGGCTGTAAAGCGGTTCTTGAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR GCA 90 bp CTCTTGTTTCAAGAACCGCTTTACAGCCTTGTCTCTGTCTCTAGATaGTGGTTTCTGCAGCAGCCTCTCTGCAACCTGAGGGCAGCAATG +
Preference number: 1 (lower is better)
Translates to: LLFQEPLYSLVSVSR*WFLQQPLCNLRAAM
Trigger: CATTGCTGCCCTCAGGTTGCAGAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGAGACAAGGCTGTAAAGCGGTTCTTGAAACAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR TCA 90 bp ACTCAAGAGTGTGGTCCTATTTGTGATGGAGCATTGGGCAATGCCTaGTATGTGCACCAATCCCTTCGCCTCTCTTGGTCTCAATTTCCC +
Preference number: 1 (lower is better)
Translates to: TQECGPICDGALGNA*YVHQSLRLSWSQFP
Trigger: GGGAAATTGAGACCAAGAGAGGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAGGACCACACTCTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 90 bp TGCTGTACCCAGGGAGCCTGCCTCTCGGTCCCTGATACAGTAGTCTaGAGAATTCTCAAAATACACGAGGTCATTTTTCGTTGGCTTCTT +
Preference number: 1 (lower is better)
Translates to: CCTQGACLSVPDTVV*RILKIHEVIFRWLL
Trigger: AAGAAGCCAACGAAAAATGACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR GCA 90 bp AGTGTGGTCCTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTaGACCAATCCCTTCGCCTCTCTTGGTCTCAATTTCCCCAAACTA +
Preference number: 1 (lower is better)
Translates to: SVVLFVMEHWAMPDM*TNPFASLGLNFPKL
Trigger: TAGTTTGGGGAAATTGAGACCAAGAGAGGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAGGACCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 90 bp CTATCTCAAACACTCAAGAGTGTGGTCCTATTTGTGATGGAGCATTaGGCAATGCCTGATATGTGCACCAATCCCTTCGCCTCTCTTGGT +
Preference number: 1 (lower is better)
Translates to: LSQTLKSVVLFVMEH*AMPDMCTNPFASLG
Trigger: ACCAAGAGAGGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAGGACCACACTCTTGAGTGTTTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR GCA 90 bp CATTCTCTTATTTTTCCCACCTCAGTGGCAGGACCCACTGCCACTTaGGATGGTTGCCATAATCTCCCTTATGGATTAGGACAATTTATG +
Preference number: 1 (lower is better)
Translates to: HSLIFPTSVAGPTAT*DGCHNLPYGLGQFM
Trigger: CATAAATTGTCCTAATCCATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGGTGGGAAAAATAAGAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 90 bp ACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATC +
Preference number: 1 (lower is better)
Translates to: TVVWRILKIHEVIFR*LLKPLVSHSETCAI
Trigger: GATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAAAAATGACCTCGTGTATTTTGAGAATTCTCCAGACTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CCA 90 bp GTAGCAGAAAGTATTTCAACAGGTACCATGGTCACTTCTTGGTTGTaGATTAATGACAGGCTTTATCTGACAATTAACCTTCCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: VAESISTGTMVTSWL*INDRLYLTINLPAS
Trigger: GCTGGCAGGAAGGTTAATTGTCAGATAAAGCCTGTCATTAATCCACAACCAAGAAGTGACCATGGTACCTGTTGAAATACTTTCTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CCA 90 bp TTACTTGTAGCAGAAAGTATTTCAACAGGTACCATGGTCACTTCTTaGTTGTGGATTAATGACAGGCTTTATCTGACAATTAACCTTCCT +
Preference number: 1 (lower is better)
Translates to: LLVAESISTGTMVTS*LWINDRLYLTINLP
Trigger: AGGAAGGTTAATTGTCAGATAAAGCCTGTCATTAATCCACAACCAAGAAGTGACCATGGTACCTGTTGAAATACTTTCTGCTACAAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CCA 90 bp GGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGGGTGGGTGGAGACAGTaGTCTGGGCCCACCACCCTC +
Preference number: 2 (lower is better)
Translates to: GPCMCAHPELPGSPDSARGGWRQ*SGPTTL
Trigger: GAGGGTGGTGGGCCCAGACCACTGTCTCCACCCACC...CCGTGCGCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGCCAGCCAGCATGTCCTaGGAGTACATGAGCCGCTCA +
Preference number: 2 (lower is better)
Translates to: LSMPREVRLHTRPAVPREPASMS*EYMSRS
Trigger: TGAGCGGCTCATGTACTCTCAGGACATGCTGGCTGG...CTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGAGCTTCCAGGCAGTCCTaGCAGCGCACGGCGCAGCAC +
Preference number: 2 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRASRQS*QRTAQH
Trigger: GTGCTGCGCCGTGCGCTGTCAGGACTGCCTGGAAGC...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GACGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCCCGGGAAGTCAGGTTaGACACACGGCCTGCTGTAC +
Preference number: 2 (lower is better)
Translates to: DACWGHVAVVQSAFLGALPGKSG*THGLLY
Trigger: GTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGG...CAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CAA 90 bp GGTGACGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTaGGGGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: GDACWGHVAVVQSAF*GALHVCTSRASRQS
Trigger: GGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGAGAGGGGGCTTCCGTTaGGATAAAGGCCACATGCCT +
Preference number: 2 (lower is better)
Translates to: LSMPREVRLHTRPAVPRERGGFR*DKGHMP
Trigger: AGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCT...CTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGGGTGGGTGGAGACAGTaGTCTGGGCCCACCACCCTC +
Preference number: 2 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMGGWRQ*SGPTTL
Trigger: GAGGGTGGTGGGCCCAGACCACTGTCTCCACCCACC...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CCA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATAAACGTCAAGGTGGGTaGAGACAGTGGTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHKRQGG*RQWSGP
Trigger: GGGCCCAGACCACTGTCTCCACCCACCTTGACGTTT...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGAAGGGAAGGTGGATGGTaGCGCCTGCTGGGGTCATGT +
Preference number: 2 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRREGGW*RLLGSC
Trigger: ACATGACCCCAGCAGGCGTCACCATCCACCTTCCCT...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGACCAGCCAGCATGTCCTaGGAGTACATGAGCCGCTCA +
Preference number: 2 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRPASMS*EYMSRS
Trigger: TGAGCGGCTCATGTACTCTCAGGACATGCTGGCTGG...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCCACCCCAATCAAAAATaGCTTTGCTGTCCTTGGCGC +
Preference number: 2 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPHPNQK*LCCPWR
Trigger: GCGCCAAGGACAGCAAAGGCATTTTTGATTGGGGTG...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGTCACCCCGTGGCACTTaGACTCTTGTTTCAAGAACC +
Preference number: 2 (lower is better)
Translates to: GPCMCAHPELPGSPDSARSPRGT*TLVSRT
Trigger: GGTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGA...CCGTGCGCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGAAGAGGGGGCTTCCGTTaGGATAAAGGCCACATGCCT +
Preference number: 2 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRRGGFR*DKGHMP
Trigger: AGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCT...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGCACCACCCTCCCGGCTaGACAGCCTGTCATGCTATT +
Preference number: 2 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMHHPPG*TACHAI
Trigger: AATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTG...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR GCA 90 bp AGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAATCAAAAATGCCTTTaGTGTCCTTGGCGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SCPCPGKSGCTHGLLYPGNQKCL*CPWRFP
Trigger: TGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATT...CCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAGTTGCACACACGGCCTaGTGTACCCAGGGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAEVAHTA*CTQGAC
Trigger: GCAGGCTCCCTGGGTACAGCAGGCCGTGTGTGCAAC...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTCGCCAGGAGGGGAGATaGCTGCAGAACACCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLRQEGR*LQNTRR
Trigger: TCTCCTGGTGTTCTGCAGTCATCTCCCCTCCTGGCG...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAATGTCCTGAGAGTACATaGGCCGCTCACCCCGTGGCA +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAECPEST*AAHPVA
Trigger: TGCCACGGGGTGAGCGGCTCATGTACTCTCAGGACA...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTGCTTCCAGGCAGTCCTaGCAGCGCACGGCGCAGCAC +
Preference number: 2 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPASRQS*QRTAQH
Trigger: GTGCTGCGCCGTGCGCTGTCAGGACTGCCTGGAAGC...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCGGGGCCTTGCATGTGTaGACATCCAGAGCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTGALHV*TSRASR
Trigger: CCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCC...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGTCCAGTCAGCGTTCTTaGGGGCCTTGCATGTGTGCA +
Preference number: 2 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMSSQRS*GPCMCA
Trigger: TGCACACATGCAAGGCCCCCAAGAACGCTGACTGGA...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR TCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATCGCCAGGAGGGGAGATaGCTGCAGAACACCAGGAGA +
Preference number: 2 (lower is better)
Translates to: REEEGASVEIKATCLRKYRQEGR*LQNTRR
Trigger: TCTCCTGGTGTTCTGCAGTCATCTCCCCTCCTGGCG...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCTGTCCTGAGAGTACATaGGCCGCTCACCCCGTGGCA +
Preference number: 2 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFACPEST*AAHPVA
Trigger: TGCCACGGGGTGAGCGGCTCATGTACTCTCAGGACA...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCCTGAACAGCCTGTCATaGTATTTCCAAAGAGAACTC +
Preference number: 2 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPLNSLS*YFQREL
Trigger: GAGTTCTCTTTGGAAATAGCATGACAGGCTGTTCAG...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp CTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGAGTCAATGTTATCACTaGAGCCACCCCAATCAAAAA +
Preference number: 2 (lower is better)
Translates to: LSMPREVRLHTRPAVPRESQCYH*SHPNQK
Trigger: TTTTTGATTGGGGTGGCTGCAGTGATAACATTGACT...CTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTCCCGGGAAGTCAGGTTaGACACACGGCCTGCTGTAC +
Preference number: 2 (lower is better)
Translates to: SAWPTALERRNVKVGGDSPGKSG*THGLLY
Trigger: GTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGG...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAGTGGATGGTGACGCCTaGTGGGGTCATGTAGCGGTT +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAEVDGDA*WGHVAV
Trigger: AACCGCTACATGACCCCAGCAGGCGTCACCATCCAC...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTCACCACCCTCCCGGCTaGACAGCCTGTCATGCTATT +
Preference number: 2 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCHHPPG*TACHAI
Trigger: AATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTG...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp AGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGTTTACTGTTCCCATCTaGGAGAAGTATGGAATTTCT +
Preference number: 2 (lower is better)
Translates to: SCPCPGKSGCTHGLLYPGFTVPI*EKYGIS
Trigger: AGAAATTCCATACTTCTCTCAGATGGGAACAGTAAA...CCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCACTGGGCTTGAAGGGTaGTGGGCATTAGCAGACGGC +
Preference number: 2 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFATGLEG*WALADG
Trigger: GCCGTCTGCTAATGCCCATCACCCTTCAAGCCCAGT...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGAATCGCCCGTTTTCCTaGAGTCGGCCATGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKNRPFS*SRPWPA
Trigger: GGCTGGCCATGGCCGACTTCAGGAAAACGGGCGATT...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp ACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTAAAGGTCCAGTGTTCTTaGAGATCCAATGGAGTCCTT +
Preference number: 2 (lower is better)
Translates to: TSQLSMPREVRLHTRPAVKVQCS*RSNGVL
Trigger: AAGGACTCCATTGGATCTGCAAGAACACTGGACCTT...TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGACTTTGCATCCACAAATaGGCGGGCAAATTTGATCCC +
Preference number: 2 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRLCIHK*AGKFDP
Trigger: GGGATCAAATTTGCCCGCGCATTTGTGGATGCAAAG...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp CTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGGTCACTTCTTGGTTGTaGATTAATGACAGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: LSMPREVRLHTRPAVPREVTSWL*INDRLY
Trigger: ATAAAGCCTGTCATTAATCCACAACCAAGAAGTGAC...CTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CAA 90 bp ACCCCGTGGCACTTGCACTCTTGTTTCAAGAACCGCTTTACAGCCTaGTCTCTGTCTCTAGATGCTGGTTTCTGCAGCAGCCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: TPWHLHSCFKNRFTA*SLSLDAGFCSSLSA
Trigger: TGCAGAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGAGACAAGGCTGTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCACGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CCA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTCGTT +
Preference number: 2 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHEVIFR*LLKPLV
Trigger: AACGAGAGGTTTAAGAAGCCAACGAAAAATGACCTC...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGAATCGCCCGTTTTCCTaGAGTCGGCCATGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQNRPFS*SRPWPA
Trigger: GGCTGGCCATGGCCGACTTCAGGAAAACGGGCGATT...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTCTGCCTCTCGGTCCCTaGTACAGTAGTCTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: SAWPTALERRNVKVGGDSLPLGP*YSSLEN
Trigger: ATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAG...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp GGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGTTCATGGAAGAAACGTCAAGGTaGGTGGAGACAGTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: GFLNLSLATVKPVPSWFMEETSR*VETVVW
Trigger: CCAGACCACTGTCTCCACCCACCTTGACGTTTCTTC...CATGAACCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGCACCACCCTCCCGGCTaGACAGCCTGTCATGCTATT +
Preference number: 2 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQHHPPG*TACHAI
Trigger: AATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTG...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCTCCTTTCCTTTCCTTTaGATCCACAAATGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFASFPFL*IHKCAG
Trigger: GCCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGA...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATGTACCCAGGGAGCCTaGCTCTCGGTCCCTGATACA +
Preference number: 2 (lower is better)
Translates to: WLMAEANHYLHTDAPIITCTQGA*LSVPDT
Trigger: TGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTGTTGCACACACGGCCTaGTGTACCCAGGGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLVAHTA*CTQGAC
Trigger: GCAGGCTCCCTGGGTACAGCAGGCCGTGTGTGCAAC...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGCTTCACAGCTGTCCATaGCCCGGGAAGTCAGGTTGC +
Preference number: 2 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQLHSCP*PGKSGC
Trigger: GCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAG...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGAAACGTCAAGGTGGGTaGAGACAGTGGTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQKRQGG*RQWSGP
Trigger: GGGCCCAGACCACTGTCTCCACCCACCTTGACGTTT...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACAAAACGTCAAGGTGGGTaGAGACAGTGGTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: WLMAEANHYLHTDAPIITKRQGG*RQWSGP
Trigger: GGGCCCAGACCACTGTCTCCACCCACCTTGACGTTT...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGTGCCTTTGCTGTCCTTaGCGCTTCCCATCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWCLCCP*RFPSSL
Trigger: CAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCA...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATTGCCTTTGCTGTCCTTaGCGCTTCCCATCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: REEEGASVEIKATCLRKYCLCCP*RFPSSL
Trigger: CAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCA...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAGATGGTGACGCCTGCTaGGGTCATGTAGCGGTTGTC +
Preference number: 2 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVDGDAC*GHVAVV
Trigger: GACAACCGCTACATGACCCCAGCAGGCGTCACCATC...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACAAGAGGGGGCTTCCGTTaGGATAAAGGCCACATGCCT +
Preference number: 2 (lower is better)
Translates to: WLMAEANHYLHTDAPIITRGGFR*DKGHMP
Trigger: AGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCT...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp CCCATTGTACTTCCTCCAGAGATAATCGCCCGTTTTCCTGAAGTCGGCCATGGCATGCGCGGGCAAATTTaGTCCCATAGTCAATGTTAT +
Preference number: 2 (lower is better)
Translates to: PIVLPPEIIARFPEVGHGMRGQI*SHSQCY
Trigger: ATAACATTGACTATGGGATCAAATTTGCCCGCGCAT...GCCATGGCCGACTTCAGGAAAACGGGCGATTATCTCTGGAGGAAGTACAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGCGTTCTTGGGGGCCTTaGATGTGTGCACATCCAGAG +
Preference number: 2 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQRSWGP*MCAHPE
Trigger: CTCTGGATGTGCACACATGCAAGGCCCCCAAGAACG...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCACAGATGTGAAGATCTaGGTTCTGGGGATGCTGTTG +
Preference number: 2 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFATDVKI*VLGMLL
Trigger: CAACAGCATCCCCAGAACCCAGATCTTCACATCTGT...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR TCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAATTTGTGGGAAGACATTaGGAAAGCTCCTTTGAGACA +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAEFVGRH*ESSFET
Trigger: TGTCTCAAAGGAGCTTTCTCAATGTCTTCCCACAAA...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAATTCTGCTTGGCCAACTaGTCTAGAAAGAAGAAACGT +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAEFCLAN*SRKKKR
Trigger: ACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGAA...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTTTCTGCTTGGCCAACTaGTCTAGAAAGAAGAAACGT +
Preference number: 2 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLFCLAN*SRKKKR
Trigger: ACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGAA...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAATTCTTGCAGATCCAATaGAGTCCTTGTAGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAEFLQIQ*SPCRRE
Trigger: TTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAA...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTTCGATGAGCCCACTTTaGACCTGCCCTACCGCCAGA +
Preference number: 2 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALSMSPL*TCPTAR
Trigger: TCTGGCGGTAGGGCAGGTCCAAAGTGGGCTCATCGA...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTTCTGTCTCTAGATGCTaGTTTCTGCAGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPSVSRC*FLQQPL
Trigger: GAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGA...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR TCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATTTTGTGGGAAGACATTaGGAAAGCTCCTTTGAGACA +
Preference number: 2 (lower is better)
Translates to: REEEGASVEIKATCLRKYFVGRH*ESSFET
Trigger: TGTCTCAAAGGAGCTTTCTCAATGTCTTCCCACAAA...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAAGCTGTAAAACCACTTaGTCAGACAAAAGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAESCKTT*SDKSLG
Trigger: ACCAAGACTTTTGTCTGATCAAGTGGTTTTACAGCT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTAAAGCAATCCCTTTCTaGGGCTTTTGCTCTTACAAA +
Preference number: 2 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLKAIPF*GFCSYK
Trigger: TTTGTAAGAGCAAAAGCCTCAGAAAGGGATTGCTTT...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATATGCGCGGGCAAATTTaGTCCCATAGTCAATGTTAT +
Preference number: 2 (lower is better)
Translates to: REEEGASVEIKATCLRKYMRGQI*SHSQCY
Trigger: ATAACATTGACTATGGGATCAAATTTGCCCGCGCAT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTTGCCATCCTGGTTCATaGCCACCTGGATGGCCCCAT +
Preference number: 2 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLCHPGS*PPGWPH
Trigger: ATGGGGCCATCCAGGTGGTCATGAACCAGGATGGCA...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTCTGAACAGCCTGTCATaGTATTTCCAAAGAGAACTC +
Preference number: 2 (lower is better)
Translates to: SAWPTALERRNVKVGGDSLNSLS*YFQREL
Trigger: GAGTTCTCTTTGGAAATAGCATGACAGGCTGTTCAG...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTGGGGCCTTGCATGTGTaGACATCCAGAGCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLGALHV*TSRASR
Trigger: CCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCC...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGTTTCAACAGGTACCATaGTCACTTCTTGGTTGTGGA +
Preference number: 2 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWFQQVP*SLLGCG
Trigger: TCCACAACCAAGAAGTGACCATGGTACCTGTTGAAA...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGTTCTGCTTGGCCAACTaGTCTAGAAAGAAGAAACGT +
Preference number: 2 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKFCLAN*SRKKKR
Trigger: ACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGAA...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGTCAATGTTATCACTaGAGCCACCCCAATCAAAAA +
Preference number: 2 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCSQCYH*SHPNQK
Trigger: TTTTTGATTGGGGTGGCTGCAGTGATAACATTGACT...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTGAAGAAACGTCAAGGTaGGTGGAGACAGTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLEETSR*VETVVW
Trigger: CCAGACCACTGTCTCCACCCACCTTGACGTTTCTTC...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAATGGAATTTCTTAATTaGGACCATTTGTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: ACHAISKENSPGGEMTAEMEFLN*DHLWED
Trigger: GTCTTCCCACAAATGGTCCCAATTAAGAAATTCCAT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTCGTT +
Preference number: 2 (lower is better)
Translates to: REEEGASVEIKATCLRKYEVIFR*LLKPLV
Trigger: AACGAGAGGTTTAAGAAGCCAACGAAAAATGACCTC...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAACGGCGCAGCACCAGTaGAACTTACACCCACACTTG +
Preference number: 2 (lower is better)
Translates to: LHTDAPIITVESLKHSLQTAQHQ*NLHPHL
Trigger: CAAGTGTGGGTGTAAGTTCCACTGGTGCTGCGCCGT...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTTCCAGTCAGCGTTCTTaGGGGCCTTGCATGTGTGCA +
Preference number: 2 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLSSQRS*GPCMCA
Trigger: TGCACACATGCAAGGCCCCCAAGAACGCTGACTGGA...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGAAAGCAATCCCTTTCTaGGGCTTTTGCTCTTACAAA +
Preference number: 2 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKKAIPF*GFCSYK
Trigger: TTTGTAAGAGCAAAAGCCTCAGAAAGGGATTGCTTT...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTGCCTTCGCACTCTCATaGAGGAATTCACACCAACCT +
Preference number: 2 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLAFALS*RNSHQP
Trigger: AGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGC...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR GCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAGGTCCAGTGTTCTTaGAGATCCAATGGAGTCCTT +
Preference number: 2 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVKVQCS*RSNGVL
Trigger: AAGGACTCCATTGGATCTGCAAGAACACTGGACCTT...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR GCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCAATCAAAAATGCCTTTaGTGTCCTTGGCGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSNQKCL*CPWRFP
Trigger: TGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATT...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTTCACCCCGTGGCACTTaGACTCTTGTTTCAAGAACC +
Preference number: 2 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALSPRGT*TLVSRT
Trigger: GGTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGA...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTGAAGAAACGTCAAGGTaGGTGGAGACAGTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: APIITVESLKHSLQVTICEETSR*VETVVW
Trigger: CCAGACCACTGTCTCCACCCACCTTGACGTTTCTTC...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGTTTGTGGGAAGACATTaGGAAAGCTCCTTTGAGACA +
Preference number: 2 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQFVGRH*ESSFET
Trigger: TGTCTCAAAGGAGCTTTCTCAATGTCTTCCCACAAA...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACACAAGTCTTTCAGTTATaGGATTCCATGGGTCACATG +
Preference number: 2 (lower is better)
Translates to: WLMAEANHYLHTDAPIITQVFQL*DSMGHM
Trigger: CATGTGACCCATGGAATCTCATAACTGAAAGACTTG...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTTCTTTAAACTGGGCTTaGAGGGTGATGGGCATTAGC +
Preference number: 2 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLSLNWA*RVMGIS
Trigger: GCTAATGCCCATCACCCTTCAAGCCCAGTTTAAAGA...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR GCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAACACCCCAATCAAAAATaGCTTTGCTGTCCTTGGCGC +
Preference number: 2 (lower is better)
Translates to: LHTDAPIITVESLKHSLQHPNQK*LCCPWR
Trigger: GCGCCAAGGACAGCAAAGGCATTTTTGATTGGGGTG...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTCTTTGCATCCACAAATaGGCGGGCAAATTTGATCCC +
Preference number: 2 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLLCIHK*AGKFDP
Trigger: GGGATCAAATTTGCCCGCGCATTTGTGGATGCAAAG...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR GCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTTCCTTTCCTTTCCTTTaGATCCACAAATGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLSFPFL*IHKCAG
Trigger: GCCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGA...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATTCTTGCAGATCCAATaGAGTCCTTGTAGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: WLMAEANHYLHTDAPIITFLQIQ*SPCRRE
Trigger: TTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCTTCTTGCAGATCCAATaGAGTCCTTGTAGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSFLQIQ*SPCRRE
Trigger: TTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAA...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTTGGTTCATGACCACCTaGATGGCCCCATTGTACTTC +
Preference number: 2 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLWFMTT*MAPLYF
Trigger: GAAGTACAATGGGGCCATCCAGGTGGTCATGAACCA...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CAA 90 bp GAGGGCTGGAGGCAAATGTTAACTATGGCAAAGTACTCCAGTAGGTaGTTTTGTACGAGTCTCAGTCTAAATGACCTTACTGTATGGTAT +
Preference number: 2 (lower is better)
Translates to: EGWRQMLTMAKYSSR*FCTSLSLNDLTVWY
Trigger: ATACCATACAGTAAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCATAGTTAACATTTGCCTCCAGCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAGCTGTAAAACCACTTaGTCAGACAAAAGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVSCKTT*SDKSLG
Trigger: ACCAAGACTTTTGTCTGATCAAGTGGTTTTACAGCT...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR TCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCAGATCCTTTCCAATTTaGAACACAGCCTGGATTGAT +
Preference number: 2 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSRSFPI*NTAWID
Trigger: ATCAATCCAGGCTGTGTTTCAAATTGGAAAGGATCT...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTATGGAATTTCTTAATTaGGACCATTTGTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPMEFLN*DHLWED
Trigger: GTCTTCCCACAAATGGTCCCAATTAAGAAATTCCAT...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CAA 90 bp CTTGTAGCAGAAAGTATTTCAACAGGTACCATGGTCACTTCTTGGTaGTGGATTAATGACAGGCTTTATCTGACAATTAACCTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LVAESISTGTMVTSW*WINDRLYLTINLPA
Trigger: GGCAGGAAGGTTAATTGTCAGATAAAGCCTGTCATTAATCCACAACCAAGAAGTGACCATGGTACCTGTTGAAATACTTTCTGCTACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATTTACTGTTCCCATCTaGGAGAAGTATGGAATTTCT +
Preference number: 2 (lower is better)
Translates to: WLMAEANHYLHTDAPIITFTVPI*EKYGIS
Trigger: AGAAATTCCATACTTCTCTCAGATGGGAACAGTAAA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR GCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTAAGGTCCAGTGTTCTTaGAGATCCAATGGAGTCCTT +
Preference number: 2 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLKVQCS*RSNGVL
Trigger: AAGGACTCCATTGGATCTGCAAGAACACTGGACCTT...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAATGGAATTTCTTAATTaGGACCATTTGTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVMEFLN*DHLWED
Trigger: GTCTTCCCACAAATGGTCCCAATTAAGAAATTCCAT...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTACCTGATACAGTAGTCTaGAGAATTCTCAAAATACAC +
Preference number: 2 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVPDTVV*RILKIH
Trigger: GTGTATTTTGAGAATTCTCCAGACTACTGTATCAGG...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CAA 90 bp ATTAGGACAATTTATGTAGGTTCCTACGTGGATATCCTTGTCCCCTaGCTACTTACCAGGAGGGATATATCTCAGCATAAAAAGAATGTC +
Preference number: 2 (lower is better)
Translates to: IRTIYVGSYVDILVP*LLTRRDISQHKKNV
Trigger: GACATTCTTTTTATGCTGAGATATATCCCTCCTGGTAAGTAGCAAGGGGACAAGGATATCCACGTAGGAACCTACATAAATTGTCCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTAGCTGTAAAACCACTTaGTCAGACAAAAGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLSCKTT*SDKSLG
Trigger: ACCAAGACTTTTGTCTGATCAAGTGGTTTTACAGCT...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAACAAGTCTTTCAGTTATaGGATTCCATGGGTCACATG +
Preference number: 2 (lower is better)
Translates to: LHTDAPIITVESLKHSLQQVFQL*DSMGHM
Trigger: CATGTGACCCATGGAATCTCATAACTGAAAGACTTG...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR TCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAATGACAGGCTTTATCTaGCAATTAACCTTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LHTDAPIITVESLKHSLQMTGFI*QLTFLP
Trigger: TGGCAGGAAGGTTAATTGTCAGATAAAGCCTGTCAT...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR TCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTCCACTATTTGCATACTaGTGCTCCCATAATTACAGT +
Preference number: 2 (lower is better)
Translates to: APIITVESLKHSLQVTICPLFAY*CSHNYS
Trigger: ACTGTAATTATGGGAGCATCAGTATGCAAATAGTGG...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCCCCCGGGAAGTCAGGTaGCACACACGGCCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPPREVR*HTRPAV
Trigger: TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGG...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR TCA 72 bp CTAGATGCTGGTTTCTGCAGCAGCCTCTCTGCAACCTaGGGGCAGCAATGCCGACAGGCAGCAAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LDAGFCSSLSAT*GQQCRQAASCR
Trigger: CCTGCAGCTTGCTGCCTGTCGGCATTGCTGCCCTCAGGTTGCAGAGAGGCTGCTGCAGAAACCAGCATCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR GCA 72 bp CTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATaGTATTTCCAAAGAGAACTCGCCAGGAGGGGAGAT +
Preference number: 3 (lower is better)
Translates to: LGPPPSRLNSLS*YFQRELARRGD
Trigger: ATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCATGCCTTTGCTGTCCTaGGCGCTTCCCATCTTCTTT +
Preference number: 3 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPMPLLS*ALPIFF
Trigger: AAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCAT...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR GCA 72 bp GATGTGAAGATCTGGGTTCTGGGGATGCTGTTGAGCTaGTCGATGAGCCCACTTTGGACCTGCCCTACCGCC +
Preference number: 3 (lower is better)
Translates to: DVKIWVLGMLLS*SMSPLWTCPTA
Trigger: GGCGGTAGGGCAGGTCCAAAGTGGGCTCATCGAGCAGCTCAACAGCATCCCCAGAACCCAGATCTTCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CCA 72 bp TCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTaGTCTGGGCCCACCACCCTCCCGGCTGAACAGCCT +
Preference number: 3 (lower is better)
Translates to: SRKKKRQGGWRQ*SGPTTLPAEQP
Trigger: AGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGACCACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATATGCCTTTGCTGTCCTaGGCGCTTCCCATCTTCTTT +
Preference number: 3 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHMPLLS*ALPIFF
Trigger: AAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCAT...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR GCA 72 bp TCTGTCTCTAGATGCTGGTTTCTGCAGCAGCCTCTCTaGAACCTGAGGGCAGCAATGCCGACAGGCAGCAAG +
Preference number: 3 (lower is better)
Translates to: SVSRCWFLQQPL*NLRAAMPTGSK
Trigger: CTTGCTGCCTGTCGGCATTGCTGCCCTCAGGTTGCAGAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CAA 90 bp CTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGTTAAGTCAGGGGCAGTaGATTCTGCTTTCTTTACTG +
Preference number: 3 (lower is better)
Translates to: LSMPREVRLHTRPAVPRELSQGQ*ILLSLL
Trigger: CAGTAAAGAAAGCAGAATCAACTGCCCCTGACTTAA...CTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp ACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACAATCAAAAATGCCTTaGCTGTCCTTGGCGCTTCCC +
Preference number: 3 (lower is better)
Translates to: TSQLSMPREVRLHTRPAVQSKMP*LSLALP
Trigger: GGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTG...TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR TCA 72 bp CAGCAGGAGGAAGGGCTGATGGCTGTGGGACCCCCATaGAAGTGCCTTCGCACTCTCATGAAGGAATTCACA +
Preference number: 3 (lower is better)
Translates to: QQEEGLMAVGPP*KCLRTLMKEFT
Trigger: TGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCCACAGCCATCAGCCCTTCCTCCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR TCA 72 bp ATCCAATGGAGTCCTTGTAGAAGGGAAGGTGGATGGTaGCGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTC +
Preference number: 3 (lower is better)
Translates to: IQWSPCRREGGW*RLLGSCSGCPV
Trigger: GACTGGACAACCGCTACATGACCCCAGCAGGCGTCACCATCCACCTTCCCTTCTACAAGGACTCCATTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CCA 72 bp CTGGGGATGCTGTTGAGCTGCTCGATGAGCCCACTTTaGACCTGCCCTACCGCCAGACTTTTTGTGATCCAA +
Preference number: 3 (lower is better)
Translates to: LGMLLSCSMSPL*TCPTARLFVIQ
Trigger: TTGGATCACAAAAAGTCTGGCGGTAGGGCAGGTCCAAAGTGGGCTCATCGAGCAGCTCAACAGCATCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CAA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGCCCCGGGAAGTCAGGTaGCACACACGGCCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKPREVR*HTRPAV
Trigger: TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGG...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR TCA 72 bp GGCCTGCTGTACCCAGGGAGCCTGCCTCTCGGTCCCTaGTACAGTAGTCTGGAGAATTCTCAAAATACACGA +
Preference number: 3 (lower is better)
Translates to: GLLYPGSLPLGP*YSSLENSQNTR
Trigger: TCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CCA 72 bp AGCAAGCTGCAGGCACACTTGACAGATGTGAAGATCTaGGTTCTGGGGATGCTGTTGAGCTGCTCGATGAGC +
Preference number: 3 (lower is better)
Translates to: SKLQAHLTDVKI*VLGMLLSCSMS
Trigger: GCTCATCGAGCAGCTCAACAGCATCCCCAGAACCCAGATCTTCACATCTGTCAAGTGTGCCTGCAGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CCA 72 bp GAACCGCTTTACAGCCTTGTCTCTGTCTCTAGATGCTaGTTTCTGCAGCAGCCTCTCTGCAACCTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: EPLYSLVSVSRC*FLQQPLCNLRA
Trigger: TGCCCTCAGGTTGCAGAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGAGACAAGGCTGTAAAGCGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CAA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGATCCCTTCGCCTCTCTaGGTCTCAATTTCCCCAAAC +
Preference number: 3 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMIPSPL*VSISPN
Trigger: GTTTGGGGAAATTGAGACCAAGAGAGGCGAAGGGAT...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTCCAGTCAGCGTTCTaGGGGGCCTTGCATGTGTGC +
Preference number: 3 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKVQSAF*GALHVC
Trigger: GCACACATGCAAGGCCCCCAAGAACGCTGACTGGAC...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR GCA 72 bp CAAGAACCGCTTTACAGCCTTGTCTCTGTCTCTAGATaGTGGTTTCTGCAGCAGCCTCTCTGCAACCTGAGG +
Preference number: 3 (lower is better)
Translates to: QEPLYSLVSVSR*WFLQQPLCNLR
Trigger: CCTCAGGTTGCAGAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGAGACAAGGCTGTAAAGCGGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CCA 72 bp AACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTaGTTCATGACCACCTGGATGGCCCCATTGTACTTC +
Preference number: 3 (lower is better)
Translates to: NLSLATVKPVPS*FMTTWMAPLYF
Trigger: GAAGTACAATGGGGCCATCCAGGTGGTCATGAACCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTGATATCCTTGTCCCCTaGCTACTTACCAGGAGGGAT +
Preference number: 3 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLDILVP*LLTRRD
Trigger: ATCCCTCCTGGTAAGTAGCAAGGGGACAAGGATATC...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp GGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGTTCATGCTCACCCCGTGGCACTaGCACTCTTGTTTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: GFLNLSLATVKPVPSWFMLTPWH*HSCFKN
Trigger: GTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAG...CATGAACCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATAACTTACACCCACACTaGGTCATCCGGGTGACATGG +
Preference number: 3 (lower is better)
Translates to: REEEGASVEIKATCLRKYNLHPH*VIRVTW
Trigger: CCATGTCACCCGGATGACCAAGTGTGGGTGTAAGTT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR TCA 72 bp TCTCATGAAGGAATTCACACCAACCTTCAGGGTAACTaGAGACTGAGCAGCTGCCCATGTGCCTGGCCTTCT +
Preference number: 3 (lower is better)
Translates to: SHEGIHTNLQGN*RLSSCPCAWPS
Trigger: AGAAGGCCAGGCACATGGGCAGCTGCTCAGTCTTCAGTTACCCTGAAGGTTGGTGTGAATTCCTTCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTAAAGGTCCAGTGTTCTaGCAGATCCAATGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLKGPVF*QIQWSP
Trigger: AGGACTCCATTGGATCTGCAAGAACACTGGACCTTT...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCCCTACGTGGATATCCTaGTCCCCTTGCTACTTACCA +
Preference number: 3 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFAPTWIS*SPCYLP
Trigger: TGGTAAGTAGCAAGGGGACAAGGATATCCACGTAGG...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR TCA 72 bp TGTGGTCCTATTTGTGATGGAGCATTGGGCAATGCCTaGTATGTGCACCAATCCCTTCGCCTCTCTTGGTCT +
Preference number: 3 (lower is better)
Translates to: CGPICDGALGNA*YVHQSLRLSWS
Trigger: AGACCAAGAGAGGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAGGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR GCA 72 bp ATTTTTCCCACCTCAGTGGCAGGACCCACTGCCACTTaGGATGGTTGCCATAATCTCCCTTATGGATTAGGA +
Preference number: 3 (lower is better)
Translates to: IFPTSVAGPTAT*DGCHNLPYGLG
Trigger: TCCTAATCCATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGGTGGGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 72 bp ACACTCAAGAGTGTGGTCCTATTTGTGATGGAGCATTaGGCAATGCCTGATATGTGCACCAATCCCTTCGCC +
Preference number: 3 (lower is better)
Translates to: TLKSVVLFVMEH*AMPDMCTNPFA
Trigger: GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAGGACCACACTCTTGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGCAATCAAAAATGCCTTaGCTGTCCTTGGCGCTTCCC +
Preference number: 3 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKQSKMP*LSLALP
Trigger: GGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTG...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGAAAGGTCCAGTGTTCTaGCAGATCCAATGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKKGPVF*QIQWSP
Trigger: AGGACTCCATTGGATCTGCAAGAACACTGGACCTTT...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTGGCACTTGCACTCTaGTTTCAAGAACCGCTTTAC +
Preference number: 3 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKVALAL*FQEPLY
Trigger: GTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCAC...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACACTCACCCCGTGGCACTaGCACTCTTGTTTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: WLMAEANHYLHTDAPIITLTPWH*HSCFKN
Trigger: GTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAG...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CAA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAACTTAATTGGGACCATTaGTGGGAAGACATTGAGAAA +
Preference number: 3 (lower is better)
Translates to: ACHAISKENSPGGEMTAELNWDH*WEDIEK
Trigger: TTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAG...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR GCA 72 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTaGACCAATCCCTTCGCCTCTCTTGGTCTCAATTTC +
Preference number: 3 (lower is better)
Translates to: LFVMEHWAMPDM*TNPFASLGLNF
Trigger: GAAATTGAGACCAAGAGAGGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTTTCCTTTCCTTTCCTTaGCATCCACAAATGCGCGGG +
Preference number: 3 (lower is better)
Translates to: FWLMAEANHYLHTDAPIIFLSFP*HPQMRG
Trigger: CCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGAA...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CAA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGTGGCACTTGCACTCTaGTTTCAAGAACCGCTTTAC +
Preference number: 3 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQVALAL*FQEPLY
Trigger: GTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCAC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR TCA 72 bp AATACAATTAAATATGACAGGTCTTTAAACTGGGCTTaGAGGGTGATGGGCATTAGCAGACGGCGGACGTGG +
Preference number: 3 (lower is better)
Translates to: NTIKYDRSLNWA*RVMGISRRRTW
Trigger: CCACGTCCGCCGTCTGCTAATGCCCATCACCCTTCAAGCCCAGTTTAAAGACCTGTCATATTTAATTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATAAACTTAAAAGGGTATaGAAAGCCATTCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: REEEGASVEIKATCLRKYKLKRV*KAILLQ
Trigger: CTGGAGAAGAATGGCTTTCAATACCCTTTTAAGTTT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGAAGCCAACCACTATTaGCATACTGATGCTCCCATA +
Preference number: 3 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQEANHY*HTDAPI
Trigger: TATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTAAGCTGCAGGCACACTaGACAGATGTGAAGATCTGG +
Preference number: 3 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALKLQAH*TDVKIW
Trigger: CCAGATCTTCACATCTGTCAAGTGTGCCTGCAGCTT...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR-3UTR CAA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGTTAAGTCAGGGGCAGTaGATTCTGCTTTCTTTACTG +
Preference number: 3 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQLSQGQ*ILLSLL
Trigger: CAGTAAAGAAAGCAGAATCAACTGCCCCTGACTTAA...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTACCCTTTCTGAGGCTTTaGCTCTTACAAAGATACAAC +
Preference number: 3 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVPFLRL*LLQRYN
Trigger: GTTGTATCTTTGTAAGAGCAAAAGCCTCAGAAAGGG...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAAAAGGTCCAGTGTTCTaGCAGATCCAATGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: LHTDAPIITVESLKHSLQKGPVF*QIQWSP
Trigger: AGGACTCCATTGGATCTGCAAGAACACTGGACCTTT...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGCTTAATTGGGACCATTaGTGGGAAGACATTGAGAAA +
Preference number: 3 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQLNWDH*WEDIEK
Trigger: TTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAG...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGACACACGTCCCCACCTaGTTACATCAGATTTTAATA +
Preference number: 3 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQTHVPT*LHQILI
Trigger: TATTAAAATCTGATGTAACAAGGTGGGGACGTGTGT...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 72 bp TGGAGAATTCTCAAAATACACGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACC +
Preference number: 3 (lower is better)
Translates to: WRILKIHEVIFR*LLKPLVSHSET
Trigger: GGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAAAAATGACCTCGTGTATTTTGAGAATTCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR-3UTR CAA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTTTAAGTCAGGGGCAGTaGATTCTGCTTTCTTTACTG +
Preference number: 3 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLLSQGQ*ILLSLL
Trigger: CAGTAAAGAAAGCAGAATCAACTGCCCCTGACTTAA...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCAAACTTAAAAGGGTATaGAAAGCCATTCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSKLKRV*KAILLQ
Trigger: CTGGAGAAGAATGGCTTTCAATACCCTTTTAAGTTT...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTCCCTTTCTGAGGCTTTaGCTCTTACAAAGATACAAC +
Preference number: 3 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALPFLRL*LLQRYN
Trigger: GTTGTATCTTTGTAAGAGCAAAAGCCTCAGAAAGGG...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTAAGTACTCCAGTAGGTaGTTTTGTACGAGTCTCAGT +
Preference number: 3 (lower is better)
Translates to: APIITVESLKHSLQVTICKYSSR*FCTSLS
Trigger: ACTGAGACTCGTACAAAACAACCTACTGGAGTACTT...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR-3UTR CAA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTAAACTTAAAAGGGTATaGAAAGCCATTCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLKLKRV*KAILLQ
Trigger: CTGGAGAAGAATGGCTTTCAATACCCTTTTAAGTTT...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 72 bp GAGAGAAGTATGGAATTTCTTAATTGGGACCATTTGTaGGAAGACATTGAGAAAGCTCCTTTGAGACACTTT +
Preference number: 3 (lower is better)
Translates to: ERSMEFLNWDHL*EDIEKAPLRHF
Trigger: AAAGTGTCTCAAAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATACTTCTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR TCA 72 bp TTGTGCCATATATTCCCCTTAAAAGCCTCAGATAATTaGGAGTTTCAGTGTATTTCAGGTTCCTGGAATACT +
Preference number: 3 (lower is better)
Translates to: LCHIFPLKASDN*EFQCISGSWNT
Trigger: AGTATTCCAGGAACCTGAAATACACTGAAACTCTCAATTATCTGAGGCTTTTAAGGGGAATATATGGCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CCA 72 bp AGTATTTCAACAGGTACCATGGTCACTTCTTGGTTGTaGATTAATGACAGGCTTTATCTGACAATTAACCTT +
Preference number: 3 (lower is better)
Translates to: SISTGTMVTSWL*INDRLYLTINL
Trigger: AAGGTTAATTGTCAGATAAAGCCTGTCATTAATCCACAACCAAGAAGTGACCATGGTACCTGTTGAAATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR GCA 72 bp ATTTTCCACCATATTCACCCAATAGTTACAGAATATTaGCAGACCATTCATCTTCTTTTTAATTCCCTTCGG +
Preference number: 3 (lower is better)
Translates to: IFHHIHPIVTEY*QTIHLLFNSLR
Trigger: CCGAAGGGAATTAAAAAGAAGATGAATGGTCTGGCAATATTCTGTAACTATTGGGTGAATATGGTGGAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp AGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGTGCGGGCGCCATGCGTaGCCAGAGCAGAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SCPCPGKSGCTHGLLYPGCGRHA*PEQKRS
Trigger: TGAGCGCTTCTGCTCTGGGCACGCATGGCGCCCGCA...CCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGGCTGTGGGACCCCCATaGAAGTGCCTTCGCACTCTC +
Preference number: 4 (lower is better)
Translates to: GPCMCAHPELPGSPDSARAVGPP*KCLRTL
Trigger: GAGAGTGCGAAGGCACTTTCATGGGGGTCCCACAGC...CCGTGCGCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR GCA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGTTGCACACACGGCCTaGTGTACCCAGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHVAHTA*CTQGAC
Trigger: GCAGGCTCCCTGGGTACAGCAGGCCGTGTGTGCAAC...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCCCCGGGAAGTCAGGTTaGACACACGGCCTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPPGKSG*THGLLY
Trigger: GTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGG...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCCGGTGCTGGCGGAACTaGTGCTGGCATTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPRCWRN*CWHSAV
Trigger: GACAGCAGAATGCCAGCACCAGTTCCGCCAGCACCG...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGGGCTACAGGCCCTGGTaGTGGCAAATACAACTCCAG +
Preference number: 4 (lower is better)
Translates to: LSMPREVRLHTRPAVPREGYRPW*WQIQLQ
Trigger: CTGGAGTTGTATTTGCCATCACCAGGGCCTGTAGCC...CTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR TCA 90 bp GACGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGTGCCATCCTGGTTCATaGCCACCTGGATGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: DACWGHVAVVQSAFLGALCHPGS*PPGWPH
Trigger: ATGGGGCCATCCAGGTGGTCATGAACCAGGATGGCA...CAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCTGTACCCAGGGAGCCTaGCTCTCGGTCCCTGATACA +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPCTQGA*LSVPDT
Trigger: TGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACA...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCTGGCGGAACTGGTGCTaGCATTCTGCTGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPWRNWC*HSAVHS
Trigger: CGAGTGGACAGCAGAATGCCAGCACCAGTTCCGCCA...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATTGCCATCCTGGTTCATaGCCACCTGGATGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHCHPGS*PPGWPH
Trigger: ATGGGGCCATCCAGGTGGTCATGAACCAGGATGGCA...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCCTCTCCCACAGCACATaGCTTCACAGCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPLSHST*LHSCPC
Trigger: GCATGGACAGCTGTGAAGTCATGTGCTGTGGGAGAG...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGAGGTCAGACTCCGTGTaGGGGCGCCATGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMRSDSV*GRHACP
Trigger: TGGGCACGCATGGCGCCCGCACACGGAGTCTGACCT...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGGGGCCTTGCATGTGTaGACATCCAGAGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHGALHV*TSRASR
Trigger: CCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCC...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCTCTCATGTACCACCATaGAGAGTTGACCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPSHVPP*RVDLGG
Trigger: ACCCCCGAGGTCAACTCTTCATGGTGGTACATGAGA...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGATGTCCTGAGAGTACATaGGCCGCTCACCCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRCPEST*AAHPVA
Trigger: TGCCACGGGGTGAGCGGCTCATGTACTCTCAGGACA...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGACGCCAGGAGGGGAGATaGCTGCAGAACACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRRQEGR*LQNTRR
Trigger: TCTCCTGGTGTTCTGCAGTCATCTCCCCTCCTGGCG...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp ACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACACCACCCTCCCGGCTaGACAGCCTGTCATGCTATT +
Preference number: 4 (lower is better)
Translates to: TSQLSMPREVRLHTRPAVHHPPG*TACHAI
Trigger: AATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTG...TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCAGGTCAGACTCCGTGTaGGGGCGCCATGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTRSDSV*GRHACP
Trigger: TGGGCACGCATGGCGCCCGCACACGGAGTCTGACCT...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGCGTGTGCGGGCGCCATaGGTGCCCAGAGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: PPERTQRSSVLADPMESLRVRAP*VPRAEA
Trigger: CGCTTCTGCTCTGGGCACGCATGGCGCCCGCACACG...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAACGTGTGCGGGCGCCATaGGTGCCCAGAGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAERVRAP*VPRAEA
Trigger: CGCTTCTGCTCTGGGCACGCATGGCGCCCGCACACG...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATACGGCGCAGCACCAGTaGAACTTACACCCACACTTG +
Preference number: 4 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHTAQHQ*NLHPHL
Trigger: CAAGTGTGGGTGTAAGTTCCACTGGTGCTGCGCCGT...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CCCATTGTACTTCCTCCAGAGATAATCGCCCGTTTTCCTGAAGTCGGCCATGGCGGTGGGTGGAGACAGTaGTCTGGGCCCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: PIVLPPEIIARFPEVGHGGGWRQ*SGPTTL
Trigger: GAGGGTGGTGGGCCCAGACCACTGTCTCCACCCACC...GCCATGGCCGACTTCAGGAAAACGGGCGATTATCTCTGGAGGAAGTACAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCGAAGAAACGTCAAGGTaGGTGGAGACAGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPEETSR*VETVVW
Trigger: CCAGACCACTGTCTCCACCCACCTTGACGTTTCTTC...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp ACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACTGCCAAAAAGGCTGTaGTCCCTGTCCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TSQLSMPREVRLHTRPAVLPKRL*SLSRVL
Trigger: CAACACCCTGGACAGGGATCACAGCCTTTTTGGCAG...TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGATGCCATCCTGGTTCATaGCCACCTGGATGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRCHPGS*PPGWPH
Trigger: ATGGGGCCATCCAGGTGGTCATGAACCAGGATGGCA...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTGCTTCCAGGCAGTCCTaGCAGCGCACGGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSASRQS*QRTAQH
Trigger: GTGCTGCGCCGTGCGCTGTCAGGACTGCCTGGAAGC...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTGCTTCCAGGCAGTCCTaGCAGCGCACGGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCASRQS*QRTAQH
Trigger: GTGCTGCGCCGTGCGCTGTCAGGACTGCCTGGAAGC...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CCGCTCACCCCGTGGCACTTGCACTCTTGTTTCAAGAACCGCTTTACAGCCTTCCGCCAGGAGGGGAGATaGCTGCAGAACACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PLTPWHLHSCFKNRFTAFRQEGR*LQNTRR
Trigger: TCTCCTGGTGTTCTGCAGTCATCTCCCCTCCTGGCG...GAAGGCTGTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449446.5
CDS-3UTR TCA 90 bp GACGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGGCATTGGGCAATGCCTaGTATGTGCACCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: DACWGHVAVVQSAFLGALALGNA*YVHQSL
Trigger: AAGGGATTGGTGCACATATCAGGCATTGCCCAATGC...CAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR GCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGATGCTGGCGGAACTGGTaGTGGCATTCTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRCWRNW*WHSAVH
Trigger: GTGGACAGCAGAATGCCAGCACCAGTTCCGCCAGCA...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp AGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGCTTTGCATCCACAAATaGGCGGGCAAATTTGATCCC +
Preference number: 4 (lower is better)
Translates to: SCPCPGKSGCTHGLLYPGLCIHK*AGKFDP
Trigger: GGGATCAAATTTGCCCGCGCATTTGTGGATGCAAAG...CCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCTCCTTTCCTTTCCTTTaGATCCACAAATGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPSFPFL*IHKCAG
Trigger: GCCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGA...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGAAGTGGCAGGACCCACTaGCACTTGCGATGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRSGRTH*HLRWLP
Trigger: TGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACT...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGCACTCGGCCACGCCCTaGCTAATGGCACGCATCACA +
Preference number: 4 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMHSATP*LMARIT
Trigger: TGTGATGCGTGCCATTAGCCAGGGCGTGGCCGAGTG...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGAAGAAACGTCAAGGTaGGTGGAGACAGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHEETSR*VETVVW
Trigger: CCAGACCACTGTCTCCACCCACCTTGACGTTTCTTC...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
3UTR CAA 72 bp TGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTaGGGGGCCTTGCATGTGTGCACATCCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: CWGHVAVVQSAF*GALHVCTSRAS
Trigger: GGAAGCTCTGGATGTGCACACATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGACTCTCCCACAGCACATaGCTTCACAGCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRLSHST*LHSCPC
Trigger: GCATGGACAGCTGTGAAGTCATGTGCTGTGGGAGAG...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGACTTGGTCATCCGGGTaGCATGGGAGGTGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMTWSSG*HGRCRS
Trigger: GCTACGACACCTCCCATGTCACCCGGATGACCAAGT...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTAGGTCAGACTCCGTGTaGGGGCGCCATGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSRSDSV*GRHACP
Trigger: TGGGCACGCATGGCGCCCGCACACGGAGTCTGACCT...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAACAGCTGCCGCTGGCTaGTCACCAGGCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAETAAAG*SPGLAH
Trigger: ATGTGCCAGGCCTGGTGAGCAGCCAGCGGCAGCTGT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTGTTGCACACACGGCCTaGTGTACCCAGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLVAHTA*CTQGAC
Trigger: GCAGGCTCCCTGGGTACAGCAGGCCGTGTGTGCAAC...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTTGCGGGCGCCATGCGTaGCCAGAGCAGAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCCGRHA*PEQKRS
Trigger: TGAGCGCTTCTGCTCTGGGCACGCATGGCGCCCGCA...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCCGGTGCTGGCGGAACTaGTGCTGGCATTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTRCWRN*CWHSAV
Trigger: GACAGCAGAATGCCAGCACCAGTTCCGCCAGCACCG...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTGGTGGGTGGAGACAGTaGTCTGGGCCCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCGGWRQ*SGPTTL
Trigger: GAGGGTGGTGGGCCCAGACCACTGTCTCCACCCACC...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR CAA 72 bp GCAGCAATGCCGACAGGCAGCAAGCTGCAGGCACACTaGACAGATGTGAAGATCTGGGTTCTGGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: AAMPTGSKLQAH*TDVKIWVLGML
Trigger: CAGCATCCCCAGAACCCAGATCTTCACATCTGTCAAGTGTGCCTGCAGCTTGCTGCCTGTCGGCATTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCCCAGCCAGCATGTCCTaGGAGTACATGAGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTPASMS*EYMSRS
Trigger: TGAGCGGCTCATGTACTCTCAGGACATGCTGGCTGG...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTAATCGCCCGTTTTCCTaGAGTCGGCCATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLNRPFS*SRPWPA
Trigger: GGCTGGCCATGGCCGACTTCAGGAAAACGGGCGATT...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAAATCGCCCGTTTTCCTaGAGTCGGCCATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAENRPFS*SRPWPA
Trigger: GGCTGGCCATGGCCGACTTCAGGAAAACGGGCGATT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGAGAGGGGGCTTCCGTTaGGATAAAGGCCACATGCCT +
Preference number: 4 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMRGGFR*DKGHMP
Trigger: AGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCT...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAATCAAAAATGCCTTTaGTGTCCTTGGCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPNQKCL*CPWRFP
Trigger: TGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATT...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp ACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTATCCTTTCCTTTCCTTTaGATCCACAAATGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: TSQLSMPREVRLHTRPAVSFPFL*IHKCAG
Trigger: GCCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGA...TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGGTTGCACACACGGCCTaGTGTACCCAGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWVAHTA*CTQGAC
Trigger: GCAGGCTCCCTGGGTACAGCAGGCCGTGTGTGCAAC...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGTTCTGCTTGGCCAACTaGTCTAGAAAGAAGAAACGT +
Preference number: 4 (lower is better)
Translates to: LSMPREVRLHTRPAVPREFCLAN*SRKKKR
Trigger: ACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGAA...CTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGCGGTGCTGGCGGAACTaGTGCTGGCATTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PPERTQRSSVLADPMESLRCWRN*CWHSAV
Trigger: GACAGCAGAATGCCAGCACCAGTTCCGCCAGCACCG...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGACGGCGCAGCACCAGTaGAACTTACACCCACACTTG +
Preference number: 4 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMTAQHQ*NLHPHL
Trigger: CAAGTGTGGGTGTAAGTTCCACTGGTGCTGCGCCGT...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp CCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTACATCTGGATGTCGGTaGCACAGCTGCCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PKGPVFLQIQWSPCRREGTSGCR*HSCRWL
Trigger: CAGCCAGCGGCAGCTGTGTCACCGACATCCAGATGT...ACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GACGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGATGCGCGGGCAAATTTaGTCCCATAGTCAATGTTAT +
Preference number: 4 (lower is better)
Translates to: DACWGHVAVVQSAFLGALMRGQI*SHSQCY
Trigger: ATAACATTGACTATGGGATCAAATTTGCCCGCGCAT...CAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAATCGCCCGTTTTCCTaGAGTCGGCCATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCNRPFS*SRPWPA
Trigger: GGCTGGCCATGGCCGACTTCAGGAAAACGGGCGATT...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCAGGGAAGGTGGATGGTaGCGCCTGCTGGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFAREGGW*RLLGSC
Trigger: ACATGACCCCAGCAGGCGTCACCATCCACCTTCCCT...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATAGGGAAGGTGGATGGTaGCGCCTGCTGGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYREGGW*RLLGSC
Trigger: ACATGACCCCAGCAGGCGTCACCATCCACCTTCCCT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGTTTGTGGGAAGACATTaGGAAAGCTCCTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: GPCMCAHPELPGSPDSARFVGRH*ESSFET
Trigger: TGTCTCAAAGGAGCTTTCTCAATGTCTTCCCACAAA...CCGTGCGCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAACTGGGCTTGAAGGGTaGTGGGCATTAGCAGACGGC +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAETGLEG*WALADG
Trigger: GCCGTCTGCTAATGCCCATCACCCTTCAAGCCCAGT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATCCCGGGAAGTCAGGTTaGACACACGGCCTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYPGKSG*THGLLY
Trigger: GTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGG...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp GGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGCTGAACAGCCTGTCATaGTATTTCCAAAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: GPCMCAHPELPGSPDSARLNSLS*YFQREL
Trigger: GAGTTCTCTTTGGAAATAGCATGACAGGCTGTTCAG...CCGTGCGCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGGAGCAGCTGCCCATGTaGCTGGCCTTCTTCACACCA +
Preference number: 4 (lower is better)
Translates to: PPERTQRSSVLADPMESLEQLPM*LAFFTP
Trigger: TGGTGTGAAGAAGGCCAGGCACATGGGCAGCTGCTC...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGGGACCCACTGCCACTTaGGATGGTTGCCATAATCTC +
Preference number: 4 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMGPTAT*DGCHNL
Trigger: GAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCC...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGAGTGGCAGGACCCACTaGCACTTGCGATGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PPERTQRSSVLADPMESLSGRTH*HLRWLP
Trigger: TGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACT...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTAAACGTCAAGGTGGGTaGAGACAGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLKRQGG*RQWSGP
Trigger: GGGCCCAGACCACTGTCTCCACCCACCTTGACGTTT...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAAGCAGACGGCGGACGTaGCCGACTTCTTTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAESRRRT*PTSFRH
Trigger: ATGCCTGAAAGAAGTCGGCCACGTCCGCCGTCTGCT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTTCGATGAGCCCACTTTaGACCTGCCCTACCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLSMSPL*TCPTAR
Trigger: TCTGGCGGTAGGGCAGGTCCAAAGTGGGCTCATCGA...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CAA 72 bp TTGACAGATGTGAAGATCTGGGTTCTGGGGATGCTGTaGAGCTGCTCGATGAGCCCACTTTGGACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LTDVKIWVLGML*SCSMSPLWTCP
Trigger: AGGGCAGGTCCAAAGTGGGCTCATCGAGCAGCTCAACAGCATCCCCAGAACCCAGATCTTCACATCTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR TCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGACTTGGTCATCCGGGTaGCATGGGAGGTGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWTWSSG*HGRCRS
Trigger: GCTACGACACCTCCCATGTCACCCGGATGACCAAGT...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGCTTCACAGCTGTCCATaGCCCGGGAAGTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWLHSCP*PGKSGC
Trigger: GCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAG...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGGGGGCCTTGCATGTGTaGACATCCAGAGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWGALHV*TSRASR
Trigger: CCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCC...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGCGTTCTTGGGGGCCTTaGATGTGTGCACATCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPERTQRSSVLADPMESLRSWGP*MCAHPE
Trigger: CTCTGGATGTGCACACATGCAAGGCCCCCAAGAACG...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTGTGGATGGTGACGCCTaGTGGGGTCATGTAGCGGTT +
Preference number: 4 (lower is better)
Translates to: PKGPVFLQIQWSPCRREGVDGDA*WGHVAV
Trigger: AACCGCTACATGACCCCAGCAGGCGTCACCATCCAC...ACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTGTGGATGGTGACGCCTaGTGGGGTCATGTAGCGGTT +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSVDGDA*WGHVAV
Trigger: AACCGCTACATGACCCCAGCAGGCGTCACCATCCAC...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTTGGCGGAACTGGTGCTaGCATTCTGCTGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSWRNWC*HSAVHS
Trigger: CGAGTGGACAGCAGAATGCCAGCACCAGTTCCGCCA...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATGATGGTGACGCCTGCTaGGGTCATGTAGCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYDGDAC*GHVAVV
Trigger: GACAACCGCTACATGACCCCAGCAGGCGTCACCATC...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATCTGCCAAAAAGGCTGTaGTCCCTGTCCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYLPKRL*SLSRVL
Trigger: CAACACCCTGGACAGGGATCACAGCCTTTTTGGCAG...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTTGTCCTGAGAGTACATaGGCCGCTCACCCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPCPEST*AAHPVA
Trigger: TGCCACGGGGTGAGCGGCTCATGTACTCTCAGGACA...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTCTGCCTCTCGGTCCCTaGTACAGTAGTCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLLPLGP*YSSLEN
Trigger: ATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAG...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCAGAGGGGGCTTCCGTTaGGATAAAGGCCACATGCCT +
Preference number: 4 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFARGGFR*DKGHMP
Trigger: AGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCT...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCTTTACTGTTCCCATCTaGGAGAAGTATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPFTVPI*EKYGIS
Trigger: AGAAATTCCATACTTCTCTCAGATGGGAACAGTAAA...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCGCATTGGGCAATGCCTaGTATGTGCACCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTALGNA*YVHQSL
Trigger: AAGGGATTGGTGCACATATCAGGCATTGCCCAATGC...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTAGCCTCTCTGCAACCTaGGGGCAGCAATGCCGACAG +
Preference number: 4 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPSLSAT*GQQCRQ
Trigger: CTGTCGGCATTGCTGCCCTCAGGTTGCAGAGAGGCT...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR GCA 90 bp TGCCTCTCGGTCCCTGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCCTTCACAGCTGTCCATaGCCCGGGAAGTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CLSVPDTVVWRILKIHEVLHSCP*PGKSGC
Trigger: GCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAG...GACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTGCTGCTCACCAGGCCTaGCACATTATCGCACATCAC +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCAAHQA*HIIAHH
Trigger: GTGATGTGCGATAATGTGCCAGGCCTGGTGAGCAGC...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp ACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTAGCTTCCCATCTTCTTTaGATCACAGGAACAGGATTT +
Preference number: 4 (lower is better)
Translates to: TSQLSMPREVRLHTRPAVASHLL*ITGTGF
Trigger: AAATCCTGTTCCTGTGATCCAAAGAAGATGGGAAGC...TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATTCCAGTCAGCGTTCTTaGGGGCCTTGCATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYSSQRS*GPCMCA
Trigger: TGCACACATGCAAGGCCCCCAAGAACGCTGACTGGA...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAACATCTGGATGTCGGTaGCACAGCTGCCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVTSGCR*HSCRWL
Trigger: CAGCCAGCGGCAGCTGTGTCACCGACATCCAGATGT...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATGTCCTGAGAGTACATaGGCCGCTCACCCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITCPEST*AAHPVA
Trigger: TGCCACGGGGTGAGCGGCTCATGTACTCTCAGGACA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTCTGCCTCTCGGTCCCTaGTACAGTAGTCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCLPLGP*YSSLEN
Trigger: ATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAG...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGAGGGAAGGTGGATGGTaGCGCCTGCTGGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQREGGW*RLLGSC
Trigger: ACATGACCCCAGCAGGCGTCACCATCCACCTTCCCT...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATTTCGGAGTAGGACCCTaGCAAAAAGGCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYFGVGP*QKGCDP
Trigger: GGGATCACAGCCTTTTTGGCAGGGTCCTACTCCGAA...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTTTCGGAGTAGGACCCTaGCAAAAAGGCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCFGVGP*QKGCDP
Trigger: GGGATCACAGCCTTTTTGGCAGGGTCCTACTCCGAA...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAATCCTTTCCTTTCCTTTaGATCCACAAATGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAESFPFL*IHKCAG
Trigger: GCCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGA...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTCACCCCGTGGCACTTaGACTCTTGTTTCAAGAACC +
Preference number: 4 (lower is better)
Translates to: PPERTQRSSVLADPMESLSPRGT*TLVSRT
Trigger: GGTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGA...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCCCCGGGAAGTCAGGTTaGACACACGGCCTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSPGKSG*THGLLY
Trigger: GTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGG...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTGGACCCACTGCCACTTaGGATGGTTGCCATAATCTC +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSGPTAT*DGCHNL
Trigger: GAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCC...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TGCCTCTCGGTCCCTGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCGGCACGCATCACATCTaGATGTCGGTGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: CLSVPDTVVWRILKIHEVGTHHI*MSVTQL
Trigger: CAGCTGTGTCACCGACATCCAGATGTGATGCGTGCC...GACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTACACTCGGCCACGCCCTaGCTAATGGCACGCATCACA +
Preference number: 4 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVHSATP*LMARIT
Trigger: TGTGATGCGTGCCATTAGCCAGGGCGTGGCCGAGTG...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCTTTTTCCCACCTCAGTaGCAGGACCCACTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFAFFPPQ*QDPLPL
Trigger: AAGTGGCAGTGGGTCCTGCCACTGAGGTGGGAAAAA...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CAA 72 bp CTGCAGCCACCCCAATCAAAAATGCCTTTGCTGTCCTaGGCGCTTCCCATCTTCTTTGGATCACAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LQPPQSKMPLLS*ALPIFFGSQEQ
Trigger: CTGTTCCTGTGATCCAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTGGGGTGGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TGCCTCTCGGTCCCTGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCTCTCATGTACCACCATaGAGAGTTGACCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: CLSVPDTVVWRILKIHEVSHVPP*RVDLGG
Trigger: ACCCCCGAGGTCAACTCTTCATGGTGGTACATGAGA...GACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAACTTGGTCATCCGGGTaGCATGGGAGGTGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVTWSSG*HGRCRS
Trigger: GCTACGACACCTCCCATGTCACCCGGATGACCAAGT...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGACCACTATTTGCATACTaGTGCTCCCATAATTACAGT +
Preference number: 4 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRPLFAY*CSHNYS
Trigger: ACTGTAATTATGGGAGCATCAGTATGCAAATAGTGG...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp CCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTGCCTTCGCACTCTCATaGAGGAATTCACACCAACCT +
Preference number: 4 (lower is better)
Translates to: PKGPVFLQIQWSPCRREGAFALS*RNSHQP
Trigger: AGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGC...ACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTGTGTGGTCCTATTTGTaGTGGAGCATTGGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCVWSYL*WSIGQC
Trigger: GCATTGCCCAATGCTCCATCACAAATAGGACCACAC...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTACAGCTGCCGCTGGCTaGTCACCAGGCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLTAAAG*SPGLAH
Trigger: ATGTGCCAGGCCTGGTGAGCAGCCAGCGGCAGCTGT...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCATTGTACTTCCTCCAGAGATAATCGCCCGTTTTCCTGAAGTCGGCCATGGCAATCAAAAATGCCTTTaGTGTCCTTGGCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PIVLPPEIIARFPEVGHGNQKCL*CPWRFP
Trigger: TGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATT...GCCATGGCCGACTTCAGGAAAACGGGCGATTATCTCTGGAGGAAGTACAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGCACCCCAATCAAAAATaGCTTTGCTGTCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWHPNQK*LCCPWR
Trigger: GCGCCAAGGACAGCAAAGGCATTTTTGATTGGGGTG...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCTGTACCCAGGGAGCCTaGCTCTCGGTCCCTGATACA +
Preference number: 4 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSCTQGA*LSVPDT
Trigger: TGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACA...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACAGGGGCCTTGCATGTGTaGACATCCAGAGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITGALHV*TSRASR
Trigger: CCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCC...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTCGTTCTTGGGGGCCTTaGATGTGTGCACATCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPRSWGP*MCAHPE
Trigger: CTCTGGATGTGCACACATGCAAGGCCCCCAAGAACG...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGTGGATGGTGACGCCTaGTGGGGTCATGTAGCGGTT +
Preference number: 4 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQVDGDA*WGHVAV
Trigger: AACCGCTACATGACCCCAGCAGGCGTCACCATCCAC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATGGCGGAACTGGTGCTaGCATTCTGCTGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITWRNWC*HSAVHS
Trigger: CGAGTGGACAGCAGAATGCCAGCACCAGTTCCGCCA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGGTGGGTGGAGACAGTaGTCTGGGCCCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQGGWRQ*SGPTTL
Trigger: GAGGGTGGTGGGCCCAGACCACTGTCTCCACCCACC...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACACTGCCAAAAAGGCTGTaGTCCCTGTCCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITLPKRL*SLSRVL
Trigger: CAACACCCTGGACAGGGATCACAGCCTTTTTGGCAG...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTACTCTCCCACAGCACATaGCTTCACAGCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVLSHST*LHSCPC
Trigger: GCATGGACAGCTGTGAAGTCATGTGCTGTGGGAGAG...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTCGCCAGGAGGGGAGATaGCTGCAGAACACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALRQEGR*LQNTRR
Trigger: TCTCCTGGTGTTCTGCAGTCATCTCCCCTCCTGGCG...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTGCTGTGGGACCCCCATaGAAGTGCCTTCGCACTCTC +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLAVGPP*KCLRTL
Trigger: GAGAGTGCGAAGGCACTTTCATGGGGGTCCCACAGC...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTTGCTGGCGGAACTGGTaGTGGCATTCTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FWLMAEANHYLHTDAPIICWRNW*WHSAVH
Trigger: GTGGACAGCAGAATGCCAGCACCAGTTCCGCCAGCA...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTCTTTGCATCCACAAATaGGCGGGCAAATTTGATCCC +
Preference number: 4 (lower is better)
Translates to: PKGPVFLQIQWSPCRREGLCIHK*AGKFDP
Trigger: GGGATCAAATTTGCCCGCGCATTTGTGGATGCAAAG...ACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCCTTTGCATCCACAAATaGGCGGGCAAATTTGATCCC +
Preference number: 4 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFALCIHK*AGKFDP
Trigger: GGGATCAAATTTGCCCGCGCATTTGTGGATGCAAAG...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGCTGCTCACCAGGCCTaGCACATTATCGCACATCAC +
Preference number: 4 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQAAHQA*HIIAHH
Trigger: GTGATGTGCGATAATGTGCCAGGCCTGGTGAGCAGC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTGATTTTACTTCTCCTTaGCTACAGGCCCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSDFTSP*LQALVM
Trigger: CATCACCAGGGCCTGTAGCCAAGGAGAAGTAAAATC...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TGCCTCTCGGTCCCTGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCTGGTTCATGACCACCTaGATGGCCCCATTGTACTTC +
Preference number: 4 (lower is better)
Translates to: CLSVPDTVVWRILKIHEVWFMTT*MAPLYF
Trigger: GAAGTACAATGGGGCCATCCAGGTGGTCATGAACCA...GACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CCGCTCACCCCGTGGCACTTGCACTCTTGTTTCAAGAACCGCTTTACAGCCTTCGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: PLTPWHLHSCFKNRFTAFEVIFR*LLKPLV
Trigger: AACGAGAGGTTTAAGAAGCCAACGAAAAATGACCTC...GAAGGCTGTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449446.5
CDS-3UTR CCA 90 bp CCCATTGTACTTCCTCCAGAGATAATCGCCCGTTTTCCTGAAGTCGGCCATGGCTTCTTGCAGATCCAATaGAGTCCTTGTAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PIVLPPEIIARFPEVGHGFLQIQ*SPCRRE
Trigger: TTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAA...GCCATGGCCGACTTCAGGAAAACGGGCGATTATCTCTGGAGGAAGTACAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTAGCAGACGGCGGACGTaGCCGACTTCTTTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FWLMAEANHYLHTDAPIISRRRT*PTSFRH
Trigger: ATGCCTGAAAGAAGTCGGCCACGTCCGCCGTCTGCT...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGACAGATGTGAAGATCTaGGTTCTGGGGATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWTDVKI*VLGMLL
Trigger: CAACAGCATCCCCAGAACCCAGATCTTCACATCTGT...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CAA 72 bp GCAGGCAGCCTCTCCATTTTCCCTGAATGTCATCTTTaGGCTGATGGCAGAAGCCAACCACTATTTGCATAC +
Preference number: 4 (lower is better)
Translates to: AGSLSIFPECHL*ADGRSQPLFAY
Trigger: GTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAAGATGACATTCAGGGAAAATGGAGAGGCTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CAA 72 bp CACTTGCACTCTTGTTTCAAGAACCGCTTTACAGCCTaGTCTCTGTCTCTAGATGCTGGTTTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HLHSCFKNRFTA*SLSLDAGFCSS
Trigger: GCTGCTGCAGAAACCAGCATCTAGAGACAGAGACAAGGCTGTAAAGCGGTTCTTGAAACAAGAGTGCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCAAATACAACTCCAGCTaGGGAGATGGCATAAACAAA +
Preference number: 4 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTKYNSS*GDGINK
Trigger: TTTGTTTATGCCATCTCCTCAGCTGGAGTTGTATTT...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAATGCGCGGGCAAATTTaGTCCCATAGTCAATGTTAT +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAEMRGQI*SHSQCY
Trigger: ATAACATTGACTATGGGATCAAATTTGCCCGCGCAT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTCACCACCCTCCCGGCTaGACAGCCTGTCATGCTATT +
Preference number: 4 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALHHPPG*TACHAI
Trigger: AATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTG...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAATCAAAAATGCCTTTaGTGTCCTTGGCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCNQKCL*CPWRFP
Trigger: TGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATT...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTCACCCCAATCAAAAATaGCTTTGCTGTCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPHPNQK*LCCPWR
Trigger: GCGCCAAGGACAGCAAAGGCATTTTTGATTGGGGTG...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTAAGGTCCAGTGTTCTTaGAGATCCAATGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PKGPVFLQIQWSPCRREGKVQCS*RSNGVL
Trigger: AAGGACTCCATTGGATCTGCAAGAACACTGGACCTT...ACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTTGCCTTTGCTGTCCTTaGCGCTTCCCATCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPCLCCP*RFPSSL
Trigger: CAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCA...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAGAAGAAACGTCAAGGTaGGTGGAGACAGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVEETSR*VETVVW
Trigger: CCAGACCACTGTCTCCACCCACCTTGACGTTTCTTC...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTAGCTGCCCATGTGCCTaGCCTTCTTCACACCAAGCT +
Preference number: 4 (lower is better)
Translates to: FWLMAEANHYLHTDAPIISCPCA*PSSHQA
Trigger: AGCTTGGTGTGAAGAAGGCCAGGCACATGGGCAGCT...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTCACCACCCTCCCGGCTaGACAGCCTGTCATGCTATT +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLHHPPG*TACHAI
Trigger: AATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTG...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGCCTTCGCACTCTCATaGAGGAATTCACACCAACCT +
Preference number: 4 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQAFALS*RNSHQP
Trigger: AGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAAGATCCTTTCCAATTTaGAACACAGCCTGGATTGAT +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAERSFPI*NTAWID
Trigger: ATCAATCCAGGCTGTGTTTCAAATTGGAAAGGATCT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGTGTGGTCCTATTTGTaGTGGAGCATTGGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQVWSYL*WSIGQC
Trigger: GCATTGCCCAATGCTCCATCACAAATAGGACCACAC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTCTTCACAGCTGTCCATaGCCCGGGAAGTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICLHSCP*PGKSGC
Trigger: GCAACCTGACTTCCCGGGGCATGGACAGCTGTGAAG...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTCTGAACAGCCTGTCATaGTATTTCCAAAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCLNSLS*YFQREL
Trigger: GAGTTCTCTTTGGAAATAGCATGACAGGCTGTTCAG...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGTTCTGCTTGGCCAACTaGTCTAGAAAGAAGAAACGT +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWFCLAN*SRKKKR
Trigger: ACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGAA...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGATATCCTTGTCCCCTTaGTACTTACCAGGAGGGATA +
Preference number: 4 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKISLSP*YLPGGI
Trigger: TATCCCTCCTGGTAAGTAGCAAGGGGACAAGGATAT...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTGCTGCTCACCAGGCCTaGCACATTATCGCACATCAC +
Preference number: 4 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALAAHQA*HIIAHH
Trigger: GTGATGTGCGATAATGTGCCAGGCCTGGTGAGCAGC...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp CTTCTTTTTAATTCCCTTCGGATTCTAAGTGAGAAGGAACTCTCATTCCCTAAACACTCGGCCACGCCCTaGCTAATGGCACGCATCACA +
Preference number: 4 (lower is better)
Translates to: LLFNSLRILSEKELSFPKHSATP*LMARIT
Trigger: TGTGATGCGTGCCATTAGCCAGGGCGTGGCCGAGTG...TTTAGGGAATGAGAGTTCCTTCTCACTTAGAATCCGAAGGGAATTAAAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTATGCCTTTGCTGTCCTTaGCGCTTCCCATCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVCLCCP*RFPSSL
Trigger: CAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCA...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATGGTTCATGACCACCTaGATGGCCCCATTGTACTTC +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITWFMTT*MAPLYF
Trigger: GAAGTACAATGGGGCCATCCAGGTGGTCATGAACCA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCTGGTTCATGACCACCTaGATGGCCCCATTGTACTTC +
Preference number: 4 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSWFMTT*MAPLYF
Trigger: GAAGTACAATGGGGCCATCCAGGTGGTCATGAACCA...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: ACHAISKENSPGGEMTAEEVIFR*LLKPLV
Trigger: AACGAGAGGTTTAAGAAGCCAACGAAAAATGACCTC...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTTCCAGTCAGCGTTCTTaGGGGCCTTGCATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALSSQRS*GPCMCA
Trigger: TGCACACATGCAAGGCCCCCAAGAACGCTGACTGGA...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTGATGGTGACGCCTGCTaGGGTCATGTAGCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICDGDAC*GHVAVV
Trigger: GACAACCGCTACATGACCCCAGCAGGCGTCACCATC...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTGATGGTGACGCCTGCTaGGGTCATGTAGCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLDGDAC*GHVAVV
Trigger: GACAACCGCTACATGACCCCAGCAGGCGTCACCATC...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTAAACGTCAAGGTGGGTaGAGACAGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLKRQGG*RQWSGP
Trigger: GGGCCCAGACCACTGTCTCCACCCACCTTGACGTTT...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTAGCTGCCCATGTGCCTaGCCTTCTTCACACCAAGCT +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLSCPCA*PSSHQA
Trigger: AGCTTGGTGTGAAGAAGGCCAGGCACATGGGCAGCT...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTTTTCAACAGGTACCATaGTCACTTCTTGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSFQQVP*SLLGCG
Trigger: TCCACAACCAAGAAGTGACCATGGTACCTGTTGAAA...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR CCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCTCTGTCTCTAGATGCTaGTTTCTGCAGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSSVSRC*FLQQPL
Trigger: GAGAGGCTGCTGCAGAAACCAGCATCTAGAGACAGA...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTTCTCATGTACCACCATaGAGAGTTGACCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLSHVPP*RVDLGG
Trigger: ACCCCCGAGGTCAACTCTTCATGGTGGTACATGAGA...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTGGCTACAGGCCCTGGTaGTGGCAAATACAACTCCAG +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLGYRPW*WQIQLQ
Trigger: CTGGAGTTGTATTTGCCATCACCAGGGCCTGTAGCC...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATCTTTAAACTGGGCTTaGAGGGTGATGGGCATTAGC +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITSLNWA*RVMGIS
Trigger: GCTAATGCCCATCACCCTTCAAGCCCAGTTTAAAGA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATCCACTATTTGCATACTaGTGCTCCCATAATTACAGT +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYPLFAY*CSHNYS
Trigger: ACTGTAATTATGGGAGCATCAGTATGCAAATAGTGG...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTAACCTTCAGGGTAACTaGAGACTGAGCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLNLQGN*RLSSCP
Trigger: TGGGCAGCTGCTCAGTCTTCAGTTACCCTGAAGGTT...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATAGATCCTTTCCAATTTaGAACACAGCCTGGATTGAT +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYRSFPI*NTAWID
Trigger: ATCAATCCAGGCTGTGTTTCAAATTGGAAAGGATCT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAGCCACTTGCGATGGTTaGCATAATCTCCCTTATGGA +
Preference number: 4 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVATCDG*HNLPYG
Trigger: TCCATAAGGGAGATTATGGCAACCATCGCAAGTGGC...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGGCACGCATCACATCTaGATGTCGGTGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQGTHHI*MSVTQL
Trigger: CAGCTGTGTCACCGACATCCAGATGTGATGCGTGCC...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTTGCCTTTGCTGTCCTTaGCGCTTCCCATCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FWLMAEANHYLHTDAPIICLCCP*RFPSSL
Trigger: CAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCA...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: SAWPTALERRNVKVGGDSEVIFR*LLKPLV
Trigger: AACGAGAGGTTTAAGAAGCCAACGAAAAATGACCTC...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTACGGCGCAGCACCAGTaGAACTTACACCCACACTTG +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLTAQHQ*NLHPHL
Trigger: CAAGTGTGGGTGTAAGTTCCACTGGTGCTGCGCCGT...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGTTCTTGCAGATCCAATaGAGTCCTTGTAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKFLQIQ*SPCRRE
Trigger: TTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAA...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGATGGAATTTCTTAATTaGGACCATTTGTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PPERTQRSSVLADPMESLMEFLN*DHLWED
Trigger: GTCTTCCCACAAATGGTCCCAATTAAGAAATTCCAT...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTTTTTTCCCACCTCAGTaGCAGGACCCACTGCCACTT +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLFFPPQ*QDPLPL
Trigger: AAGTGGCAGTGGGTCCTGCCACTGAGGTGGGAAAAA...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGTTCATGTGTATTTCAGGTTCCTaGAATACTGATCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: GFLNLSLATVKPVPSWFMCISGS*NTDPLP
Trigger: TGGTAGAGGATCAGTATTCCAGGAACCTGAAATACA...CATGAACCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR TCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAAACCTTCAGGGTAACTaGAGACTGAGCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQNLQGN*RLSSCP
Trigger: TGGGCAGCTGCTCAGTCTTCAGTTACCCTGAAGGTT...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTTTCGGAGTAGGACCCTaGCAAAAAGGCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLFGVGP*QKGCDP
Trigger: GGGATCACAGCCTTTTTGGCAGGGTCCTACTCCGAA...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR GCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTCACCCCAATCAAAAATaGCTTTGCTGTCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALHPNQK*LCCPWR
Trigger: GCGCCAAGGACAGCAAAGGCATTTTTGATTGGGGTG...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGATGCTATGTGTCATTTaGTTTAGGCTACAGTATCAC +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWMLCVI*FRLQYH
Trigger: GTGATACTGTAGCCTAAAGCAAATGACACATAGCAT...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR CCA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTGATTTTACTTCTCCTTaGCTACAGGCCCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: FWLMAEANHYLHTDAPIIDFTSP*LQALVM
Trigger: CATCACCAGGGCCTGTAGCCAAGGAGAAGTAAAATC...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGCCTGATACAGTAGTCTaGAGAATTCTCAAAATACAC +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWPDTVV*RILKIH
Trigger: GTGTATTTTGAGAATTCTCCAGACTACTGTATCAGG...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATATGGAATTTCTTAATTaGGACCATTTGTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: REEEGASVEIKATCLRKYMEFLN*DHLWED
Trigger: GTCTTCCCACAAATGGTCCCAATTAAGAAATTCCAT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGATGGAATTTCTTAATTaGGACCATTTGTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWMEFLN*DHLWED
Trigger: GTCTTCCCACAAATGGTCCCAATTAAGAAATTCCAT...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGATTTTACTTCTCCTTaGCTACAGGCCTTCGGAGTA +
Preference number: 4 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQDFTSP*LQAFGV
Trigger: TACTCCGAAGGCCTGTAGCCAAGGAGAAGTAAAATC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449446.5
CDS-3UTR CCA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCGTCACTTCTTGGTTGTaGATTAATGACAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFAVTSWL*INDRLY
Trigger: ATAAAGCCTGTCATTAATCCACAACCAAGAAGTGAC...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
3UTR CAA 72 bp GTCATCTTTTGGCTGATGGCAGAAGCCAACCACTATTaGCATACTGATGCTCCCATAATTACAGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VIFWLMAEANHY*HTDAPIITVES
Trigger: GGACTCAACTGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAAGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACAATGCGCGGGCAAATTTaGTCCCATAGTCAATGTTAT +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITMRGQI*SHSQCY
Trigger: ATAACATTGACTATGGGATCAAATTTGCCCGCGCAT...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACATTTGTGGGAAGACATTaGGAAAGCTCCTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: WLMAEANHYLHTDAPIITFVGRH*ESSFET
Trigger: TGTCTCAAAGGAGCTTTCTCAATGTCTTCCCACAAA...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGTTTACTGTTCCCATCTaGGAGAAGTATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKFTVPI*EKYGIS
Trigger: AGAAATTCCATACTTCTCTCAGATGGGAACAGTAAA...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCACAACAATTTGGGAATaGGGGAAAGGGGATGAATTC +
Preference number: 4 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSTTIWE*GKGDEF
Trigger: GAATTCATCCCCTTTCCCTCATTCCCAAATTGTTGT...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGAGCTGTAAAACCACTTaGTCAGACAAAAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQSCKTT*SDKSLG
Trigger: ACCAAGACTTTTGTCTGATCAAGTGGTTTTACAGCT...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR TCA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCAAAGCAATCCCTTTCTaGGGCTTTTGCTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSKAIPF*GFCSYK
Trigger: TTTGTAAGAGCAAAAGCCTCAGAAAGGGATTGCTTT...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTCAAGTCTTTCAGTTATaGGATTCCATGGGTCACATG +
Preference number: 4 (lower is better)
Translates to: FWLMAEANHYLHTDAPIIQVFQL*DSMGHM
Trigger: CATGTGACCCATGGAATCTCATAACTGAAAGACTTG...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAATCTTTAAACTGGGCTTaGAGGGTGATGGGCATTAGC +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQSLNWA*RVMGIS
Trigger: GCTAATGCCCATCACCCTTCAAGCCCAGTTTAAAGA...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTTTCTGCTTGGCCAACTaGTCTAGAAAGAAGAAACGT +
Preference number: 4 (lower is better)
Translates to: FWLMAEANHYLHTDAPIIFCLAN*SRKKKR
Trigger: ACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGAA...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGCCACTTGCGATGGTTaGCATAATCTCCCTTATGGA +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQATCDG*HNLPYG
Trigger: TCCATAAGGGAGATTATGGCAACCATCGCAAGTGGC...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
3UTR CAA 72 bp ATTTATGTAGGTTCCTACGTGGATATCCTTGTCCCCTaGCTACTTACCAGGAGGGATATATCTCAGCATAAA +
Preference number: 4 (lower is better)
Translates to: IYVGSYVDILVP*LLTRRDISQHK
Trigger: TTTATGCTGAGATATATCCCTCCTGGTAAGTAGCAAGGGGACAAGGATATCCACGTAGGAACCTACATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTTTTGTGGGAAGACATTaGGAAAGCTCCTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLFVGRH*ESSFET
Trigger: TGTCTCAAAGGAGCTTTCTCAATGTCTTCCCACAAA...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTAAGGTCCAGTGTTCTTaGAGATCCAATGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICKVQCS*RSNGVL
Trigger: AAGGACTCCATTGGATCTGCAAGAACACTGGACCTT...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAATATCCTTGTCCCCTTaGTACTTACCAGGAGGGATA +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQISLSP*YLPGGI
Trigger: TATCCCTCCTGGTAAGTAGCAAGGGGACAAGGATAT...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTGCTTCCCATCTTCTTTaGATCACAGGAACAGGATTT +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLASHLL*ITGTGF
Trigger: AAATCCTGTTCCTGTGATCCAAAGAAGATGGGAAGC...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp ATGGCAAAGTACTCCAGTAGGTTGTTTTGTACGAGTCTCAGTCTAAATGACCTTAAATACAACTCCAGCTaGGGAGATGGCATAAACAAA +
Preference number: 4 (lower is better)
Translates to: MAKYSSRLFCTSLSLNDLKYNSS*GDGINK
Trigger: TTTGTTTATGCCATCTCCTCAGCTGGAGTTGTATTT...AAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTCAAGTCTTTCAGTTATaGGATTCCATGGGTCACATG +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICQVFQL*DSMGHM
Trigger: CATGTGACCCATGGAATCTCATAACTGAAAGACTTG...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAACAACAATTTGGGAATaGGGGAAAGGGGATGAATTC +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQTTIWE*GKGDEF
Trigger: GAATTCATCCCCTTTCCCTCATTCCCAAATTGTTGT...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTATGACAGGCTTTATCTaGCAATTAACCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICMTGFI*QLTFLP
Trigger: TGGCAGGAAGGTTAATTGTCAGATAAAGCCTGTCAT...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR GCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTCTGAACAGCCTGTCATaGTATTTCCAAAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLLNSLS*YFQREL
Trigger: GAGTTCTCTTTGGAAATAGCATGACAGGCTGTTCAG...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTGCTTCCCATCTTCTTTaGATCACAGGAACAGGATTT +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICASHLL*ITGTGF
Trigger: AAATCCTGTTCCTGTGATCCAAAGAAGATGGGAAGC...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp TTATATCAAGGGGACAGTAATGCAAAGCAATCCCTTTCTGAGGCTTTTGCTCTTTGTATTTCAGGTTCCTaGAATACTGATCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: LYQGDSNAKQSLSEAFALCISGS*NTDPLP
Trigger: TGGTAGAGGATCAGTATTCCAGGAACCTGAAATACA...AAGAGCAAAAGCCTCAGAAAGGGATTGCTTTGCATTACTGTCCCCTTGATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp TTGCATACTGATGCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAAAAGCAATCCCTTTCTaGGGCTTTTGCTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: LHTDAPIITVESLKHSLQKAIPF*GFCSYK
Trigger: TTTGTAAGAGCAAAAGCCTCAGAAAGGGATTGCTTT...TTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGCATCAGTATGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTAGTCAATGTTATCACTaGAGCCACCCCAATCAAAAA +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLSQCYH*SHPNQK
Trigger: TTTTTGATTGGGGTGGCTGCAGTGATAACATTGACT...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
3UTR CAA 72 bp AGGCAAATGTTAACTATGGCAAAGTACTCCAGTAGGTaGTTTTGTACGAGTCTCAGTCTAAATGACCTTACT +
Preference number: 4 (lower is better)
Translates to: RQMLTMAKYSSR*FCTSLSLNDLT
Trigger: AGTAAGGTCATTTAGACTGAGACTCGTACAAAACAACCTACTGGAGTACTTTGCCATAGTTAACATTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR TCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTTTTACTGTTCCCATCTaGGAGAAGTATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICFTVPI*EKYGIS
Trigger: AGAAATTCCATACTTCTCTCAGATGGGAACAGTAAA...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp CTTCTTTTTAATTCCCTTCGGATTCTAAGTGAGAAGGAACTCTCATTCCCTAAAAGTCAATGTTATCACTaGAGCCACCCCAATCAAAAA +
Preference number: 4 (lower is better)
Translates to: LLFNSLRILSEKELSFPKSQCYH*SHPNQK
Trigger: TTTTTGATTGGGGTGGCTGCAGTGATAACATTGACT...TTTAGGGAATGAGAGTTCCTTCTCACTTAGAATCCGAAGGGAATTAAAAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR GCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTATGCTATGTGTCATTTaGTTTAGGCTACAGTATCAC +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLMLCVI*FRLQYH
Trigger: GTGATACTGTAGCCTAAAGCAAATGACACATAGCAT...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTCCTGATACAGTAGTCTaGAGAATTCTCAAAATACAC +
Preference number: 4 (lower is better)
Translates to: APIITVESLKHSLQVTICPDTVV*RILKIH
Trigger: GTGTATTTTGAGAATTCTCCAGACTACTGTATCAGG...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CCA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTCCTGATACAGTAGTCTaGAGAATTCTCAAAATACAC +
Preference number: 4 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLPDTVV*RILKIH
Trigger: GTGTATTTTGAGAATTCTCCAGACTACTGTATCAGG...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS GCA 90 bp ACCCCCTTGCGTCTGCATCAGGTCAGACTCCGTGTGCGGGCGCCATaGGTGCCCAGAGCAGAAGCGCTCAGCTCCGGGAGCGCCTCGTCA +
Preference number: 5 (lower is better)
Translates to: TPLRLHQVRLRVRAP*VPRAEALSSGSASS
Trigger: TGACGAGGCGCTCCCGGAGCTGAGCGCTTCTGCTCTGGGCACGCATGGCGCCCGCACACGGAGTCTGACCTGATGCAGACGCAAGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449446.5
ENST00000461427.1
ENST00000647844.1
CDS-3UTR CAA 90 bp AGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGCCCCGGGAAGTCAGGTaGCACACACGGCCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: SCPCPGKSGCTHGLLYPGPREVR*HTRPAV
Trigger: TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGG...CCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp GGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGTACCACCATGAAGAGTaGACCTCGGGGGTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GPCMCAHPELPGSPDSARYHHEE*TSGVSQ
Trigger: CTGGCTCACCCCCGAGGTCAACTCTTCATGGTGGTA...CCGTGCGCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGAGTCCAGTCAGCGTTCTaGGGGGCCTTGCATGTGTGC +
Preference number: 5 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRVQSAF*GALHVC
Trigger: GCACACATGCAAGGCCCCCAAGAACGCTGACTGGAC...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp GACGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGAAAGGTCCAGTGTTCTaGCAGATCCAATGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: DACWGHVAVVQSAFLGALKGPVF*QIQWSP
Trigger: AGGACTCCATTGGATCTGCAAGAACACTGGACCTTT...CAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGAAACTTACACCCACACTaGGTCATCCGGGTGACATGG +
Preference number: 5 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRNLHPH*VIRVTW
Trigger: CCATGTCACCCGGATGACCAAGTGTGGGTGTAAGTT...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGATTCCTTTCCTTTCCTTaGCATCCACAAATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRFLSFP*HPQMRG
Trigger: CCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGAA...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp GCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGAAGCCAACCACTATTaGCATACTGATGCTCCCATA +
Preference number: 5 (lower is better)
Translates to: ACWGHVAVVQSAFLGALHEANHY*HTDAPI
Trigger: TATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTC...ATGCAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR CAA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTTACCACCATGAAGAGTaGACCTCGGGGGTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCYHHEE*TSGVSQ
Trigger: CTGGCTCACCCCCGAGGTCAACTCTTCATGGTGGTA...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGGGATTTTACTTCTCCTaGGCTACAGGCCCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMGFYFS*ATGPGD
Trigger: ATCACCAGGGCCTGTAGCCAAGGAGAAGTAAAATCC...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp TCTGGGCCCACCACCCTCCCGGCTGAACAGCCTGTCATGCTATTTCCAAAGAGAGTGGCACTTGCACTCTaGTTTCAAGAACCGCTTTAC +
Preference number: 5 (lower is better)
Translates to: SGPTTLPAEQPVMLFPKRVALAL*FQEPLY
Trigger: GTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCAC...TCTCTTTGGAAATAGCATGACAGGCTGTTCAGCCGGGAGGGTGGTGGGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp CCCATTGTACTTCCTCCAGAGATAATCGCCCGTTTTCCTGAAGTCGGCCATGGCAACTTACACCCACACTaGGTCATCCGGGTGACATGG +
Preference number: 5 (lower is better)
Translates to: PIVLPPEIIARFPEVGHGNLHPH*VIRVTW
Trigger: CCATGTCACCCGGATGACCAAGTGTGGGTGTAAGTT...GCCATGGCCGACTTCAGGAAAACGGGCGATTATCTCTGGAGGAAGTACAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp GACGCCTGCTGGGGTCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGACACACGTCCCCACCTaGTTACATCAGATTTTAATA +
Preference number: 5 (lower is better)
Translates to: DACWGHVAVVQSAFLGALTHVPT*LHQILI
Trigger: TATTAAAATCTGATGTAACAAGGTGGGGACGTGTGT...CAAGGCCCCCAAGAACGCTGACTGGACAACCGCTACATGACCCCAGCAGGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR CAA 90 bp CCGCTCACCCCGTGGCACTTGCACTCTTGTTTCAAGAACCGCTTTACAGCCTTCTTCATATTAACCCCCTaGCGTCTGCATCAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: PLTPWHLHSCFKNRFTAFFILTP*RLHQVR
Trigger: TCTGACCTGATGCAGACGCAAGGGGGTTAATATGAA...GAAGGCTGTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449446.5
CDS-3UTR CAA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCCCCCGGGAAGTCAGGTaGCACACACGGCCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSPREVR*HTRPAV
Trigger: TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGG...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAAACTTACACCCACACTaGGTCATCCGGGTGACATGG +
Preference number: 5 (lower is better)
Translates to: ACHAISKENSPGGEMTAENLHPH*VIRVTW
Trigger: CCATGTCACCCGGATGACCAAGTGTGGGTGTAAGTT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAAACTTAAAAGGGTATaGAAAGCCATTCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SQLSMPREVRLHTRPAVPKLKRV*KAILLQ
Trigger: CTGGAGAAGAATGGCTTTCAATACCCTTTTAAGTTT...GGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATGGACAGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCTTCATATTAACCCCCTaGCGTCTGCATCAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTFILTP*RLHQVR
Trigger: TCTGACCTGATGCAGACGCAAGGGGGTTAATATGAA...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CCCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGCAATCAAAAATGCCTTaGCTGTCCTTGGCGCTTCCC +
Preference number: 5 (lower is better)
Translates to: PPERTQRSSVLADPMESLQSKMP*LSLALP
Trigger: GGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTG...CAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTCTCACCCCGTGGCACTaGCACTCTTGTTTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: SAWPTALERRNVKVGGDSLTPWH*HSCFKN
Trigger: GTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAG...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TTCGTTGGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGCTCACCCCGTGGCACTaGCACTCTTGTTTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: FVGFLNLSLATVKPVPSWLTPWH*HSCFKN
Trigger: GTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAG...CCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCCAACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCGTCCAGTCAGCGTTCTaGGGGGCCTTGCATGTGTGC +
Preference number: 5 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSVQSAF*GALHVC
Trigger: GCACACATGCAAGGCCCCCAAGAACGCTGACTGGAC...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTATCCCTTCGCCTCTCTaGGTCTCAATTTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLIPSPL*VSISPN
Trigger: GTTTGGGGAAATTGAGACCAAGAGAGGCGAAGGGAT...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp TGGCCTTCTTCACACCAAGCTCAGAGCAGCTACTGTCATTCCACTGTTCCCACCAACCGCTTTACAGCCTaGTCTCTGTCTCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: WPSSHQAQSSYCHSTVPTNRFTA*SLSLDA
Trigger: AGCATCTAGAGACAGAGACAAGGCTGTAAAGCGGTT...GGTGGGAACAGTGGAATGACAGTAGCTGCTCTGAGCTTGGTGTGAAGAAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR CAA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCGGATTTTACTTCTCCTaGGCTACAGGCCCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFAGFYFS*ATGPGD
Trigger: ATCACCAGGGCCTGTAGCCAAGGAGAAGTAAAATCC...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTATGCCTTTGCTGTCCTaGGCGCTTCCCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: PKGPVFLQIQWSPCRREGMPLLS*ALPIFF
Trigger: AAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCAT...ACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp CCCCAGAAAGAACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTCAATCAAAAATGCCTTaGCTGTCCTTGGCGCTTCCC +
Preference number: 5 (lower is better)
Translates to: PQKEPKGPVFLQIQWSPCQSKMP*LSLALP
Trigger: GGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTG...ACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTTCTTTCTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATCAATCAAAAATGCCTTaGCTGTCCTTGGCGCTTCCC +
Preference number: 5 (lower is better)
Translates to: REEEGASVEIKATCLRKYQSKMP*LSLALP
Trigger: GGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTG...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGACCCACTGCCACTTGCGATGGTTGCCATAATCTCCCTTATGGAAACACAGCCTGGATaGATGATTTCACAGTTCATC +
Preference number: 5 (lower is better)
Translates to: PQWQDPLPLAMVAIISLMETQPG*MISQFI
Trigger: GATGAACTGTGAAATCATCAATCCAGGCTGTGTTTC...CATAAGGGAGATTATGGCAACCATCGCAAGTGGCAGTGGGTCCTGCCACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCGATATCCTTGTCCCCTaGCTACTTACCAGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFADILVP*LLTRRD
Trigger: ATCCCTCCTGGTAAGTAGCAAGGGGACAAGGATATC...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATCCTACGTGGATATCCTaGTCCCCTTGCTACTTACCA +
Preference number: 5 (lower is better)
Translates to: REEEGASVEIKATCLRKYPTWIS*SPCYLP
Trigger: TGGTAAGTAGCAAGGGGACAAGGATATCCACGTAGG...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GGCTTCTTAAACCTCTCGTTAGCCACAGTGAAACCTGTGCCATCCTGGTTCATGCCTACGTGGATATCCTaGTCCCCTTGCTACTTACCA +
Preference number: 5 (lower is better)
Translates to: GFLNLSLATVKPVPSWFMPTWIS*SPCYLP
Trigger: TGGTAAGTAGCAAGGGGACAAGGATATCCACGTAGG...CATGAACCAGGATGGCACAGGTTTCACTGTGGCTAACGAGAGGTTTAAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR CAA 90 bp TGCCTCTCGGTCCCTGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCTTCCTTTCCTTTCCTTaGCATCCACAAATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: CLSVPDTVVWRILKIHEVFLSFP*HPQMRG
Trigger: CCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGAA...GACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATGTGGCACTTGCACTCTaGTTTCAAGAACCGCTTTAC +
Preference number: 5 (lower is better)
Translates to: REEEGASVEIKATCLRKYVALAL*FQEPLY
Trigger: GTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCAC...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TCTGCTTGGCCAACTGCTCTAGAAAGAAGAAACGTCAAGGTGGGTGGAGACAGTAAAGGTCCAGTGTTCTaGCAGATCCAATGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: SAWPTALERRNVKVGGDSKGPVF*QIQWSP
Trigger: AGGACTCCATTGGATCTGCAAGAACACTGGACCTTT...ACTGTCTCCACCCACCTTGACGTTTCTTCTTTCTAGAGCAGTTGGCCAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATAAAGGTCCAGTGTTCTaGCAGATCCAATGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: REEEGASVEIKATCLRKYKGPVF*QIQWSP
Trigger: AGGACTCCATTGGATCTGCAAGAACACTGGACCTTT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp CCCATTGTACTTCCTCCAGAGATAATCGCCCGTTTTCCTGAAGTCGGCCATGGCTTAAGTCAGGGGCAGTaGATTCTGCTTTCTTTACTG +
Preference number: 5 (lower is better)
Translates to: PIVLPPEIIARFPEVGHGLSQGQ*ILLSLL
Trigger: CAGTAAAGAAAGCAGAATCAACTGCCCCTGACTTAA...GCCATGGCCGACTTCAGGAAAACGGGCGATTATCTCTGGAGGAAGTACAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp CTTCTTTTTAATTCCCTTCGGATTCTAAGTGAGAAGGAACTCTCATTCCCTAAACCCCGGGAAGTCAGGTaGCACACACGGCCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: LLFNSLRILSEKELSFPKPREVR*HTRPAV
Trigger: TACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGG...TTTAGGGAATGAGAGTTCCTTCTCACTTAGAATCCGAAGGGAATTAAAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTTTAAGTCAGGGGCAGTaGATTCTGCTTTCTTTACTG +
Preference number: 5 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLLSQGQ*ILLSLL
Trigger: CAGTAAAGAAAGCAGAATCAACTGCCCCTGACTTAA...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAAAGTACTCCAGTAGGTaGTTTTGTACGAGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: ACHAISKENSPGGEMTAEKYSSR*FCTSLS
Trigger: ACTGAGACTCGTACAAAACAACCTACTGGAGTACTT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GGGACCCCCATGAAAGTGCCTTCGCACTCTCATGAAGGAATTCACACCAACCTTGAAACACAGCCTGGATaGATGATTTCACAGTTCATC +
Preference number: 5 (lower is better)
Translates to: GTPMKVPSHSHEGIHTNLETQPG*MISQFI
Trigger: GATGAACTGTGAAATCATCAATCCAGGCTGTGTTTC...AAGGTTGGTGTGAATTCCTTCATGAGAGTGCGAAGGCACTTTCATGGGGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTATCCCTTCGCCTCTCTaGGTCTCAATTTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPIPSPL*VSISPN
Trigger: GTTTGGGGAAATTGAGACCAAGAGAGGCGAAGGGAT...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGATGCCTTTGCTGTCCTaGGCGCTTCCCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQMPLLS*ALPIFF
Trigger: AAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCAT...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TGCTCTTACAAAGATACAACACACCATAGTACCAAAGGACACACGTCCCCACCTGTGGCACTTGCACTCTaGTTTCAAGAACCGCTTTAC +
Preference number: 5 (lower is better)
Translates to: CSYKDTTHHSTKGHTSPPVALAL*FQEPLY
Trigger: GTAAAGCGGTTCTTGAAACAAGAGTGCAAGTGCCAC...AGGTGGGGACGTGTGTCCTTTGGTACTATGGTGTGTTGTATCTTTGTAAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATTTAAGTCAGGGGCAGTaGATTCTGCTTTCTTTACTG +
Preference number: 5 (lower is better)
Translates to: REEEGASVEIKATCLRKYLSQGQ*ILLSLL
Trigger: CAGTAAAGAAAGCAGAATCAACTGCCCCTGACTTAA...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCCCCTTTCTGAGGCTTTaGCTCTTACAAAGATACAAC +
Preference number: 5 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFAPFLRL*LLQRYN
Trigger: GTTGTATCTTTGTAAGAGCAAAAGCCTCAGAAAGGG...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CTATTTGTGATGGAGCATTGGGCAATGCCTGATATGTGCACCAATCCCTTCGCCAAGTACTCCAGTAGGTaGTTTTGTACGAGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LFVMEHWAMPDMCTNPFAKYSSR*FCTSLS
Trigger: ACTGAGACTCGTACAAAACAACCTACTGGAGTACTT...GGCGAAGGGATTGGTGCACATATCAGGCATTGCCCAATGCTCCATCACAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTAAAACCACTTGATCAGGGATTTTACTTCTCCTaGGCTACAGGCCTTCGGAGT +
Preference number: 5 (lower is better)
Translates to: PGNYQLPLRVVAVKPLDQGFYFS*ATGLRS
Trigger: ACTCCGAAGGCCTGTAGCCAAGGAGAAGTAAAATCC...CTGATCAAGTGGTTTTACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449446.5
CDS-3UTR CAA 90 bp GGTCTCAATTTCCCCAAACTAAAGGAAGCTGAGATGTCTCCTAAGATCCTTTCCAAGCTGCAGGCACACTaGACAGATGTGAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: GLNFPKLKEAEMSPKILSKLQAH*TDVKIW
Trigger: CCAGATCTTCACATCTGTCAAGTGTGCCTGCAGCTT...GGAAAGGATCTTAGGAGACATCTCAGCTTCCTTTAGTTTGGGGAAATTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS-3UTR CAA 90 bp GAAAGCCATTCTTCTCCAGGTAATTACCAATTACCCCTAAGGGTGGTAGCTGTATTCATATTAACCCCCTaGCGTCTGCATCAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: ESHSSPGNYQLPLRVVAVFILTP*RLHQVR
Trigger: TCTGACCTGATGCAGACGCAAGGGGGTTAATATGAA...TACAGCTACCACCCTTAGGGGTAATTGGTAATTACCTGGAGAAGAATGGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp GCCTGTCATGCTATTTCCAAAGAGAACTCGCCAGGAGGGGAGATGACTGCAGAAAAACTTAAAAGGGTATaGAAAGCCATTCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ACHAISKENSPGGEMTAEKLKRV*KAILLQ
Trigger: CTGGAGAAGAATGGCTTTCAATACCCTTTTAAGTTT...TTCTGCAGTCATCTCCCCTCCTGGCGAGTTCTCTTTGGAAATAGCATGACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp AGGGAGGAAGAGGGGGCTTCCGTTGAGATAAAGGCCACATGCCTTAGGAAATATACACACGTCCCCACCTaGTTACATCAGATTTTAATA +
Preference number: 5 (lower is better)
Translates to: REEEGASVEIKATCLRKYTHVPT*LHQILI
Trigger: TATTAAAATCTGATGTAACAAGGTGGGGACGTGTGT...ATATTTCCTAAGGCATGTGGCCTTTATCTCAACGGAAGCCCCCTCTTCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GTATGGAATTTCTTAATTGGGACCATTTGTGGGAAGACATTGAGAAAGCTCCTTCTCACCCCGTGGCACTaGCACTCTTGTTTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: VWNFLIGTICGKTLRKLLLTPWH*HSCFKN
Trigger: GTTCTTGAAACAAGAGTGCAAGTGCCACGGGGTGAG...AAGGAGCTTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAGAAATTCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp AACCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGCTTAATTGGGACCATTaGTGGGAAGACATTGAGAAA +
Preference number: 5 (lower is better)
Translates to: NPKVQCSCRSNGVLVEGKLNWDH*WEDIEK
Trigger: TTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAG...CTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TGCCTCTCGGTCCCTGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCCTTAATTGGGACCATTaGTGGGAAGACATTGAGAAA +
Preference number: 5 (lower is better)
Translates to: CLSVPDTVVWRILKIHEVLNWDH*WEDIEK
Trigger: TTTCTCAATGTCTTCCCACAAATGGTCCCAATTAAG...GACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449446.5
ENST00000647844.1
CDS-3UTR CAA 90 bp TGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTACAGAAGCCAACCACTATTaGCATACTGATGCTCCCATA +
Preference number: 5 (lower is better)
Translates to: WLMAEANHYLHTDAPIITEANHY*HTDAPI
Trigger: TATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTC...TGTAATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CCCAAAGGTCCAGTGTTCTTGCAGATCCAATGGAGTCCTTGTAGAAGGGAAGGTGAGGAAAGAGTCACTTaGGAAAAGTTAGACAACAAT +
Preference number: 5 (lower is better)
Translates to: PKGPVFLQIQWSPCRREGEERVT*EKLDNN
Trigger: ATTGTTGTCTAACTTTTCCAAAGTGACTCTTTCCTC...ACCTTCCCTTCTACAAGGACTCCATTGGATCTGCAAGAACACTGGACCTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp GCTCCCATAATTACAGTTGAGTCCCTTAAACATAGTCTCCAAGTTACGATTTGTTTCCTTTCCTTTCCTTaGCATCCACAAATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: APIITVESLKHSLQVTICFLSFP*HPQMRG
Trigger: CCCGCGCATTTGTGGATGCAAAGGAAAGGAAAGGAA...ACAAATCGTAACTTGGAGACTATGTTTAAGGGACTCAACTGTAATTATGGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp CTTCTTTTTAATTCCCTTCGGATTCTAAGTGAGAAGGAACTCTCATTCCCTAAAATGCCTTTGCTGTCCTaGGCGCTTCCCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLFNSLRILSEKELSFPKMPLLS*ALPIFF
Trigger: AAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCAT...TTTAGGGAATGAGAGTTCCTTCTCACTTAGAATCCGAAGGGAATTAAAAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTAAACTTAAAAGGGTATaGAAAGCCATTCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: FWLMAEANHYLHTDAPIIKLKRV*KAILLQ
Trigger: CTGGAGAAGAATGGCTTTCAATACCCTTTTAAGTTT...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS-3UTR CAA 90 bp TTTTGGCTGATGGCAGAAGCCAACCACTATTTGCATACTGATGCTCCCATAATTGAGGAAAGAGTCACTTaGGAAAAGTTAGACAACAAT +
Preference number: 5 (lower is better)
Translates to: FWLMAEANHYLHTDAPIIEERVT*EKLDNN
Trigger: ATTGTTGTCTAACTTTTCCAAAGTGACTCTTTCCTC...AATTATGGGAGCATCAGTATGCAAATAGTGGTTGGCTTCTGCCATCAGCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS GCA 72 bp TGCATCAGGTCAGACTCCGTGTGCGGGCGCCATGCGTaGCCAGAGCAGAAGCGCTCAGCTCCGGGAGCGCCT +
Preference number: 6 (lower is better)
Translates to: CIRSDSVCGRHA*PEQKRSAPGAP
Trigger: AGGCGCTCCCGGAGCTGAGCGCTTCTGCTCTGGGCACGCATGGCGCCCGCACACGGAGTCTGACCTGATGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449446.5
ENST00000461427.1
ENST00000647844.1
CDS GCA 72 bp CGTCTGCATCAGGTCAGACTCCGTGTGCGGGCGCCATaGGTGCCCAGAGCAGAAGCGCTCAGCTCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: RLHQVRLRVRAP*VPRAEALSSGS
Trigger: GCTCCCGGAGCTGAGCGCTTCTGCTCTGGGCACGCATGGCGCCCGCACACGGAGTCTGACCTGATGCAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449446.5
ENST00000461427.1
ENST00000647844.1
CDS CAA 90 bp AGCCAGAGCCAGATTCCACCGAGAGGGGCGTTCATATTAACCCCCTaGCGTCTGCATCAGGTCAGACTCCGTGTGCGGGCGCCATGCGTG +
Preference number: 6 (lower is better)
Translates to: SQSQIPPRGAFILTP*RLHQVRLRVRAPCV
Trigger: CACGCATGGCGCCCGCACACGGAGTCTGACCTGATGCAGACGCAAGGGGGTTAATATGAACGCCCCTCTCGGTGGAATCTGGCTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000461427.1
ENST00000647844.1
CDS CAA 72 bp CAGATTCCACCGAGAGGGGCGTTCATATTAACCCCCTaGCGTCTGCATCAGGTCAGACTCCGTGTGCGGGCG +
Preference number: 6 (lower is better)
Translates to: QIPPRGAFILTP*RLHQVRLRVRA
Trigger: CGCCCGCACACGGAGTCTGACCTGATGCAGACGCAAGGGGGTTAATATGAACGCCCCTCTCGGTGGAATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265441.8
ENST00000449446.5
ENST00000461427.1
ENST00000491214.1
ENST00000647844.1
CDS GCA 72 bp ACTTCTCCTTGGCTACAGGCCTTCGGAGTAGGACCCTaGCAAAAAGGCTGTGATCCCTGTCCAGGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: TSPWLQAFGVGP*QKGCDPCPGCC
Trigger: GCAACACCCTGGACAGGGATCACAGCCTTTTTGGCAGGGTCCTACTCCGAAGGCCTGTAGCCAAGGAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449446.5
CDS GCA 72 bp CAAAGGCAGATTCCCGACTACTTCGGAGTAGGACCCTaGCAAAAAGGCTGTGATCCCTGTCCAGGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: QRQIPDYFGVGP*QKGCDPCPGCC
Trigger: GCAACACCCTGGACAGGGATCACAGCCTTTTTGGCAGGGTCCTACTCCGAAGTAGTCGGGAATCTGCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265441.8
CDS GCA 72 bp TTTCAAGAACCGCTTTACAGCTTCGGAGTAGGACCCTaGCAAAAAGGCTGTGATCCCTGTCCAGGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: FQEPLYSFGVGP*QKGCDPCPGCC
Trigger: GCAACACCCTGGACAGGGATCACAGCCTTTTTGGCAGGGTCCTACTCCGAAGCTGTAAAGCGGTTCTTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491214.1
CDS TCA 72 bp GCTACAGGCCCTGGTGATGGCAAATACAACTCCAGCTaGGGAGATGGCATAAACAAAGGCAGATTCCCGACT +
Preference number: 6 (lower is better)
Translates to: ATGPGDGKYNSS*GDGINKGRFPT
Trigger: AGTCGGGAATCTGCCTTTGTTTATGCCATCTCCTCAGCTGGAGTTGTATTTGCCATCACCAGGGCCTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265441.8
CDS TCA 72 bp GCTACAGGCCCTGGTGATGGCAAATACAACTCCAGCTaGGGAGATGGCATAAACAAAGGCAGATTCCCGATT +
Preference number: 6 (lower is better)
Translates to: ATGPGDGKYNSS*GDGINKGRFPI
Trigger: AATCGGGAATCTGCCTTTGTTTATGCCATCTCCTCAGCTGGAGTTGTATTTGCCATCACCAGGGCCTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647844.1
CDS CAA 90 bp CCCAATCAAAAATGCCTTTGCTGTCCTTGGCGCTTCCCATCTTCTTaGGATCACAGGAACAGGATTTTACTTCTCCTTGGCTACAGGCCC +
Preference number: 6 (lower is better)
Translates to: PNQKCLCCPWRFPSS*DHRNRILLLLGYRP
Trigger: GGGCCTGTAGCCAAGGAGAAGTAAAATCCTGTTCCTGTGATCCAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265441.8
ENST00000647844.1
CDS CAA 90 bp CCCAATCAAAAATGCCTTTGCTGTCCTTGGCGCTTCCCATCTTCTTaGGATCACAGGAACAGGATTTTACTTCTCCTTGGCTACAGGCCT +
Preference number: 6 (lower is better)
Translates to: PNQKCLCCPWRFPSS*DHRNRILLLLGYRP
Trigger: AGGCCTGTAGCCAAGGAGAAGTAAAATCCTGTTCCTGTGATCCAAAGAAGATGGGAAGCGCCAAGGACAGCAAAGGCATTTTTGATTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449446.5