RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT16 (Homo sapiens)

Ensembl gene IDs: ENSG00000002745

Ensembl transcript IDs: ENST00000222462.3, ENST00000361301.6

Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATaGCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAG +
Preference number: 1 (lower is better)
Translates to: NFTSAAQGWAPLWLQ*HCILLRHLAQGWME
Trigger: CTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
3UTR CCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTaGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGC +
Preference number: 1 (lower is better)
Translates to: ARVNFTSAAQGWAPL*LQCHCILLRHLAQG
Trigger: GCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
3UTR CCA 90 bp AGGGATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATaGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCAT +
Preference number: 1 (lower is better)
Translates to: RDSTARVNFTSAAQG*APLWLQCHCILLRH
Trigger: ATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222462.3
3UTR CAA 90 bp AGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTaGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RVNFTSAAQGWAPLW*QCHCILLRHLAQGW
Trigger: CCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
3UTR-3UTR TCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAAGCCATTGTATATTGCTaGGGCATCTTGCCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQAIVYC*GILPKA
Trigger: AGCCTTGGGCAAGATGCCTCAGCAATATACAATGGC...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
3UTR CCA 72 bp AACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTaGTTGCAATGCCATTGTATATTGCTGAGGCATCTT +
Preference number: 3 (lower is better)
Translates to: NFTSAAQGWAPL*LQCHCILLRHL
Trigger: AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
3UTR CCA 72 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATaGGCACCTCTCTGGTTGCAATGCCATTGTATATTG +
Preference number: 3 (lower is better)
Translates to: TARVNFTSAAQG*APLWLQCHCIL
Trigger: CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCTGGCTCCCGCACTCCTaGATGCCCAGCCGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCWLPHS*MPSRAP
Trigger: GGGCGCCCGGCTGGGCATTCAGGAGTGCGGGAGCCA...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCTCCCGCACTCCTGAATaGCCAGCCGGGCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCSRTPE*PAGRPL
Trigger: GAGAGGGCGCCCGGCTGGGCATTCAGGAGTGCGGGA...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp GGGATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCGGGCGCCCTCTCGGATaGTCGGCAGCAGGTACGGTT +
Preference number: 4 (lower is better)
Translates to: GIPLQESTLLALHRDGHLGRPLG*SAAGTV
Trigger: AACCGTACCTGCTGCCGAGCATCCGAGAGGGCGCCC...GAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATTGGCTCCCGCACTCCTaGATGCCCAGCCGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDWLPHS*MPSRAP
Trigger: GGGCGCCCGGCTGGGCATTCAGGAGTGCGGGAGCCA...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGCCAGCCTTCACTTGCTaGGCCGCCGTTCTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: STARVNFTSAAQGWAPLWPAFTC*AAVLQG
Trigger: ACCTTGCAGAACGGCGGCTCAGCAAGTGAAGGCTGG...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCGAGATGTGCAGGAGATaGGGGAGCGCCCCTCGCATT +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCEMCRR*GSAPRI
Trigger: AATGCGAGGGGCGCTCCCGCATCTCCTGCACATCTC...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR GCA 90 bp GGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGGGGCGCCCTCTCGGATaGTCGGCAGCAGGTACGGTT +
Preference number: 4 (lower is better)
Translates to: GTSLVAMPLYIAEASCPRGRPLG*SAAGTV
Trigger: AACCGTACCTGCTGCCGAGCATCCGAGAGGGCGCCC...CCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGGAGCCGGAAACTCCGTaGCAGCGGCAGTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: TARVNFTSAAQGWAPLWLEPETP*QRQSTD
Trigger: GTCAGTAGACTGCCGCTGCCACGGAGTTTCCGGCTC...CAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCGAGCCGGAAACTCCGTaGCAGCGGCAGTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCEPETP*QRQSTD
Trigger: GTCAGTAGACTGCCGCTGCCACGGAGTTTCCGGCTC...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTCCATCTCTCGTGTCTaGACTGGCTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCSISRV*TGSRTP
Trigger: AGGAGTGCGGGAGCCAGTTCAGACACGAGAGATGGA...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATCCATCTCTCGTGTCTaGACTGGCTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQSISRV*TGSRTP
Trigger: AGGAGTGCGGGAGCCAGTTCAGACACGAGAGATGGA...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAAGCAGCGGCAGTCTACTaGCATCAACTTGGCGACAGC +
Preference number: 4 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQAAAVY*HQLGDS
Trigger: GCTGTCGCCAAGTTGATGTCAGTAGACTGCCGCTGC...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCACCTCTCCACGTGCCTaGCCACATGGGTGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCTSPRA*PHGCCN
Trigger: GTTACAACACCCATGTGGTCAGGCACGTGGAGAGGT...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCGGTACGGTTTCCTCTTaGACAGCTCCTTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCGTVSS*TAPSGG
Trigger: GCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACC...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp GATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCCACAGCAGAGGAGGTTaGAGCCATCTGCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSTARVNFTSAAQGWAPLHSRGG*SHLHPL
Trigger: CAGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTG...GAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCACAGCAGAGGAGGTTaGAGCCATCTGCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: TARVNFTSAAQGWAPLWLHSRGG*SHLHPL
Trigger: CAGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTG...CAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGATGGAGAGAGCAGCCTaGGGATCTCCTCCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILMERAA*GSPPAQ
Trigger: CTGCGCAGGAGGAGATCCCCAGGCTGCTCTCTCCAT...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CCA 90 bp GATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCGCAGCCCAGCTTCTCTaGAACCCCGAAGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DSTARVNFTSAAQGWAPLAAQLL*NPEGGN
Trigger: ATTGCCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGC...GAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp GGGATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTTGCACAGCTCCTTCTaGCGGCTGTTCAGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: GIPLQESTLLALHRDGHLLHSSF*RLFSGK
Trigger: TTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAA...GAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTCCAGCCTTCACTTGCTaGGCCGCCGTTCTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLPAFTC*AAVLQG
Trigger: ACCTTGCAGAACGGCGGCTCAGCAAGTGAAGGCTGG...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCAGCGGCAGTCTACTaGCATCAACTTGGCGACAGC +
Preference number: 4 (lower is better)
Translates to: QESTLLALHRDGHLSGCNAAAVY*HQLGDS
Trigger: GCTGTCGCCAAGTTGATGTCAGTAGACTGCCGCTGC...ATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATCTGGGGATCTCCTCCTaGGCAGGGGTGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDLGISS*AGVEMC
Trigger: GCACATCTCCACCCCTGCGCAGGAGGAGATCCCCAG...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR GCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCTCTCTTTGGTGCCGCTaGTCAGCTCGTAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCSLWCR*SARSQR
Trigger: TCTTTGGCTACGAGCTGAGCAGCGGCACCAAAGAGA...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTAGACCTGGTCACAGAATaGACCAGGCCTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVDLVTE*TRPAAI
Trigger: GATGGCTGCAGGCCTGGTGCATTCTGTGACCAGGTC...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGCTGAGCCGCCGTTCTaGAAGGTGGTGTCACAGGAA +
Preference number: 4 (lower is better)
Translates to: STLLALHRDGHLSGCNAIAEPPF*KVVSQE
Trigger: TTCCTGTGACACCACCTTGCAGAACGGCGGCTCAGC...AATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGATTGCTGAGGCATCTTaGCCAAGGCTGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: STARVNFTSAAQGWAPLWIAEAS*PRLDGV
Trigger: CACTCCATCCAGCCTTGGGCAAGATGCCTCAGCAAT...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGGCAGCCCAGCTTCTCTaGAACCCCGAAGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILAAQLL*NPEGGN
Trigger: ATTGCCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGC...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGTGTTCAGCGGCAAATTaGCGCAGCCCAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TARVNFTSAAQGWAPLWLCSAAN*RSPASL
Trigger: CAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACA...CAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAACGCCGTTCTGCAAGGTaGTGTCACAGGAACACTCTG +
Preference number: 4 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQRRSAR*CHRNTL
Trigger: CAGAGTGTTCCTGTGACACCACCTTGCAGAACGGCG...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTAGCGCTGCACAGGGATaGGCACCTCTCTGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: STLLALHRDGHLSGCNAISAAQG*APLWLQ
Trigger: TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCT...AATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp GATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCGCCATCTGCACCCTCTaGTGTACGGTTGCATTCTCT +
Preference number: 4 (lower is better)
Translates to: DSTARVNFTSAAQGWAPLAICTL*CTVAFS
Trigger: AGAGAATGCAACCGTACATCAGAGGGTGCAGATGGC...GAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCCATAGGGAGGTCTTTTaGGAAGCCCCTGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCHREVF*EAPVKR
Trigger: CCTCTTCACAGGGGCTTCTCAAAAGACCTCCCTATG...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS-3UTR GCA 90 bp CAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATCCCCGAAGGAGGCAATaGCCAACCACATCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QESTLLALHRDGHLSGCNPRRRQ*PTTSSF
Trigger: GAAACTGGATGTGGTTGGGCATTGCCTCCTTCGGGG...ATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR GCA 90 bp TTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATGACCTGGTCACAGAATaGACCAGGCCTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: LLALHRDGHLSGCNAIVYDLVTE*TRPAAI
Trigger: GATGGCTGCAGGCCTGGTGCATTCTGTGACCAGGTC...ATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAGGCTGAGCCGCCGTTCTaGAAGGTGGTGTCACAGGAA +
Preference number: 4 (lower is better)
Translates to: WLQCHCILLRHLAQGWMEAEPPF*KVVSQE
Trigger: TTCCTGTGACACCACCTTGCAGAACGGCGGCTCAGC...CTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGCCTCTGATGTACGGTTaGATTCTCTGCCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: STARVNFTSAAQGWAPLWPLMYG*ILCLVS
Trigger: GGACACAAGGCAGAGAATGCAACCGTACATCAGAGG...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATTCACACCTCTCCACGTaGCTGACCACATGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QESTLLALHRDGHLSGCNSHLST*LTTWVL
Trigger: CAACACCCATGTGGTCAGGCACGTGGAGAGGTGTGA...ATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATCACACCTCTCCACGTaGCTGACCACATGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVSHLST*LTTWVL
Trigger: CAACACCCATGTGGTCAGGCACGTGGAGAGGTGTGA...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCATTGCTGAGGCATCTTaGCCAAGGCTGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCIAEAS*PRLDGV
Trigger: CACTCCATCCAGCCTTGGGCAAGATGCCTCAGCAAT...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAAAGGCAAGTGGTGAGCTaGATGGGTGCCTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQRQVVS*MGAFPS
Trigger: AGATGGAAAGGCACCCATGCAGCTCACCACTTGCCT...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS-3UTR GCA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATCCCCGAAGGAGGCAATaGCCAACCACCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDPRRRQ*PTTIGR
Trigger: CCTCCCTATGGTGGTTGGGCATTGCCTCCTTCGGGG...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS-3UTR CCA 90 bp CAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATTTGCACAGCTCCTTCTaGCGGCTGTTCAGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: QESTLLALHRDGHLSGCNLHSSF*RLFSGK
Trigger: TTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAA...ATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTCGCCGTTCTGCAAGGTaGTGTCACAGGAACACTCTG +
Preference number: 4 (lower is better)
Translates to: STLLALHRDGHLSGCNAIRRSAR*CHRNTL
Trigger: CAGAGTGTTCCTGTGACACCACCTTGCAGAACGGCG...AATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAAAACCACATGCCATACTaGACATCATCGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQNHMPY*TSSEQP
Trigger: GGGCTGCTCCGATGATGTCCAGTATGGCATGTGGTT...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAACTACTGACATCAACTTaGCGACAGCCTGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQLLTST*RQPAFQ
Trigger: CTGGAAGGCAGGCTGTCGCCAAGTTGATGTCAGTAG...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCCAAGGCTGGATGGAGTaGTTACTTGCAAGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCQGWME*LLASVD
Trigger: GTCCACACTTGCAAGTAACCACTCCATCCAGCCTTG...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp CCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTCATCTTGCCCAAGGCTaGATGGAGTGGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: PLQESTLLALHRDGHLSGHLAQG*MEWLLA
Trigger: TGCAAGTAACCACTCCATCCAGCCTTGGGCAAGATG...ACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp CTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGAGCGCTGCACAGGGATaGGCACCTCTCTGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LWLQCHCILLRHLAQGWMSAAQG*APLWLQ
Trigger: TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCT...CATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGGTATGGCAGGCCTCCTaGCATAAGGGATCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TARVNFTSAAQGWAPLWLVWQAS*HKGSFL
Trigger: CAGGAAAGATCCCTTATGCCAGGAGGCCTGCCATAC...CAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222462.3
3UTR CAA 72 bp TGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATaGTATATTGCTGAGGCATCTTGCCCAAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: CTGMGTSLVAMP*YIAEASCPRLD
Trigger: ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp TGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAGACCTCTCCACGTGCCTaGCCACATGGGTGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: WLQCHCILLRHLAQGWMETSPRA*PHGCCN
Trigger: GTTACAACACCCATGTGGTCAGGCACGTGGAGAGGT...CTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTCATAGCAGCACCAGATaGACTTACACTCACACCTCT +
Preference number: 4 (lower is better)
Translates to: PLQESTLLALHRDGHLSGHSSTR*TYTHTS
Trigger: AGAGGTGTGAGTGTAAGTTCATCTGGTGCTGCTATG...ACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCTCATGTTGCCTGCACTaGATGACCTGGTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCSCCLH*MTWSQN
Trigger: ATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGA...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCAACACTCTGTCATGTTaGCTGCACTGCATGACCTGG +
Preference number: 4 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCNTLSC*LHCMTW
Trigger: CCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTT...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp GATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTACGGTTGCATTCTCTaGCTTGTGTCCCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: DSTARVNFTSAAQGWAPLYGCIL*LVSLGF
Trigger: GAATCCCAGGGACACAAGGCAGAGAATGCAACCGTA...GAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp GGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGTGCTTTCACACCTCCTaGAACGGACATAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GTSLVAMPLYIAEASCPRCFHTS*NGHSST
Trigger: GGTGCTGCTATGTCCGTTGCAGGAGGTGTGAAAGCA...CCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTTGCTTTCACACCTCCTaGAACGGACATAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: STLLALHRDGHLSGCNAICFHTS*NGHSST
Trigger: GGTGCTGCTATGTCCGTTGCAGGAGGTGTGAAAGCA...AATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTCCATCTTTCTGGCTTTaGCCTCTGTGGTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PLQESTLLALHRDGHLSGPSFWL*PLWFLQ
Trigger: CTGCAAAAACCACAGAGGGCAAAGCCAGAAAGATGG...ACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS-3UTR CCA 90 bp TTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATCTGCACTGCATGACCTaGTCACAGAATGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LLALHRDGHLSGCNAIVYLHCMT*SQNAPG
Trigger: GCCTGGTGCATTCTGTGACCAGGTCATGCAGTGCAG...ATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTAAACCACATGCCATACTaGACATCATCGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVNHMPY*TSSEQP
Trigger: GGGCTGCTCCGATGATGTCCAGTATGGCATGTGGTT...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGCCGTGGTGTTTCCGATaGGGAAATCTAGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: STARVNFTSAAQGWAPLWPWCFR*GNLGTF
Trigger: GAAAGTTCCTAGATTTCCCCATCGGAAACACCACGG...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTCTGCCTTGTGTCCCTaGGATTCCCAGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: STARVNFTSAAQGWAPLWSALCP*DSQFLI
Trigger: GATAAGAAACTGGGAATCCCAGGGACACAAGGCAGA...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGTTGCCCAAGGCTGGATaGAGTGGTTACTTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: TARVNFTSAAQGWAPLWLLPKAG*SGYLQV
Trigger: CACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAA...CAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGGGATGGGCACCTCTCTaGTTGCAATGCCATTGTATA +
Preference number: 4 (lower is better)
Translates to: STARVNFTSAAQGWAPLWGWAPL*LQCHCI
Trigger: TATACAATGGCATTGCAACCAGAGAGGTGCCCATCC...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGTTGCCTGCACTGCATaGCCTGGTCACAGAATGCAC +
Preference number: 4 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDVACTA*PGHRMH
Trigger: GTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAAC...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCATCTGCACCCTCTaGTGTACGGTTGCATTCTCT +
Preference number: 4 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLAICTL*CTVAFS
Trigger: AGAGAATGCAACCGTACATCAGAGGGTGCAGATGGC...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTTCTCTTTGGTGCCGCTaGTCAGCTCGTAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLSLWCR*SARSQR
Trigger: TCTTTGGCTACGAGCTGAGCAGCGGCACCAAAGAGA...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp GGGATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCGATGGAGTGGTTACTTaGAAGTGTGGACATCAGTCA +
Preference number: 4 (lower is better)
Translates to: GIPLQESTLLALHRDGHLDGVVT*KCGHQS
Trigger: TGACTGATGTCCACACTTGCAAGTAACCACTCCATC...GAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTGATGGAGTGGTTACTTaGAAGTGTGGACATCAGTCA +
Preference number: 4 (lower is better)
Translates to: PLQESTLLALHRDGHLSGDGVVT*KCGHQS
Trigger: TGACTGATGTCCACACTTGCAAGTAACCACTCCATC...ACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp GATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCGGGCACCTCTCTGGTTaGAATGCCATTGTATATTGC +
Preference number: 4 (lower is better)
Translates to: DSTARVNFTSAAQGWAPLGHLSG*NAIVYC
Trigger: GCAATATACAATGGCATTGCAACCAGAGAGGTGCCC...GAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGGTGAGCTGCATGGGTaGCTTTCCATCTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LWLQCHCILLRHLAQGWMGELHG*LSIFLA
Trigger: AGCCAGAAAGATGGAAAGGCACCCATGCAGCTCACC...CATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS-3UTR CCA 90 bp TTGGAAGTACATGAAAGGGTAAGTCAGCACCCAATGCTTATGTTAACTTTTCAATCCATCGCCCCCGCATaGAGTCCCCCAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LEVHERVSQHPMLMLTFQSIAPA*SPPAQP
Trigger: CGGCTGGGCTGGGGGACTCCATGCGGGGGCGATGGA...TTGAAAAGTTAACATAAGCATTGGGTGCTGACTTACCCTTTCATGTACTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000222462.3
3UTR CAA 72 bp TTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTaGCAATGCCATTGTATATTGCTGAGGCATCTTGCC +
Preference number: 4 (lower is better)
Translates to: FTSAAQGWAPLW*QCHCILLRHLA
Trigger: GGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp GGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTAGGAACTTTCTGCTaGACCACATGCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: GTSLVAMPLYIAEASCPRLGTFC*TTCHTG
Trigger: TCCAGTATGGCATGTGGTTCAGCAGAAAGTTCCTAG...CCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCATAGCAGCACCAGATaGACTTACACTCACACCTCT +
Preference number: 4 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILHSSTR*TYTHTS
Trigger: AGAGGTGTGAGTGTAAGTTCATCTGGTGCTGCTATG...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCATTGTATATTGCTaGGGCATCTTGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLAIVYC*GILPKA
Trigger: AGCCTTGGGCAAGATGCCTCAGCAATATACAATGGC...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TTGGAAGTACATGAAAGGGTAAGTCAGCACCCAATGCTTATGTTAACTTTTCAACAGCACGAGCAGGGCTaGCCACAGCGCGCACAAGCG +
Preference number: 4 (lower is better)
Translates to: LEVHERVSQHPMLMLTFQQHEQG*PQRAQA
Trigger: CGCTTGTGCGCGCTGTGGGCAGCCCTGCTCGTGCTG...TTGAAAAGTTAACATAAGCATTGGGTGCTGACTTACCCTTTCATGTACTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR GCA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGAGAATGCACCAGGCCTaGAGCCATCACAGCATAAAT +
Preference number: 4 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILRMHQA*SHHSIN
Trigger: ATTTATGCTGTGATGGCTGCAGGCCTGGTGCATTCT...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTAAGAATGCACCAGGCCTaGAGCCATCACAGCATAAAT +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVRMHQA*SHHSIN
Trigger: ATTTATGCTGTGATGGCTGCAGGCCTGGTGCATTCT...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTTCATGTTGCCTGCACTaGATGACCTGGTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: STLLALHRDGHLSGCNAISCCLH*MTWSQN
Trigger: ATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGA...AATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATAACACTCTGTCATGTTaGCTGCACTGCATGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLALHRDGHLSGCNAIVYNTLSC*LHCMTW
Trigger: CCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTT...ATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGGTACTTTGTTTTCTTTaGCCGTGGTGTTTCCGATGG +
Preference number: 4 (lower is better)
Translates to: TARVNFTSAAQGWAPLWLVLCFL*PWCFRW
Trigger: CCATCGGAAACACCACGGGCAAAGAAAACAAAGTAC...CAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTTACGGTTGCATTCTCTaGCTTGTGTCCCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLYGCIL*LVSLGF
Trigger: GAATCCCAGGGACACAAGGCAGAGAATGCAACCGTA...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTTGTGGACATCAGTCATaGTTTCACACCTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: STLLALHRDGHLSGCNAICGHQS*FHTSCN
Trigger: GTTGCAGGAGGTGTGAAAGCATGACTGATGTCCACA...AATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGTGTGGACATCAGTCATaGTTTCACACCTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILCGHQS*FHTSCN
Trigger: GTTGCAGGAGGTGTGAAAGCATGACTGATGTCCACA...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTACCGTGGTGTTTCCGATaGGGAAATCTAGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVPWCFR*GNLGTF
Trigger: GAAAGTTCCTAGATTTCCCCATCGGAAACACCACGG...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATCTGCCTTGTGTCCCTaGGATTCCCAGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVSALCP*DSQFLI
Trigger: GATAAGAAACTGGGAATCCCAGGGACACAAGGCAGA...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTCATCTTGCCCAAGGCTaGATGGAGTGGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLHLAQG*MEWLLA
Trigger: TGCAAGTAACCACTCCATCCAGCCTTGGGCAAGATG...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGGGATGGGCACCTCTCTaGTTGCAATGCCATTGTATA +
Preference number: 4 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILGWAPL*LQCHCI
Trigger: TATACAATGGCATTGCAACCAGAGAGGTGCCCATCC...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGCCTTTCCATCTTTCTaGCTTTGCCCTCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: STLLALHRDGHLSGCNAIAFPSF*LCPLWF
Trigger: AAACCACAGAGGGCAAAGCCAGAAAGATGGAAAGGC...AATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS-3UTR TCA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTCTAGGAACTTTCTGCTaGACCACATGCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLLGTFC*TTCHTG
Trigger: TCCAGTATGGCATGTGGTTCAGCAGAAAGTTCCTAG...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATTCTTTGGAAGTACATaGAAGGGTAAGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVFFGST*KGKSAP
Trigger: GGGTGCTGACTTACCCTTTCATGTACTTCCAAAGAA...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR GCA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTAGTACTTTGTTTTCTTTaGCCGTGGTGTTTCCGATGG +
Preference number: 4 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVVLCFL*PWCFRW
Trigger: CCATCGGAAACACCACGGGCAAAGAAAACAAAGTAC...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATCCTCTGATGTACGGTTaGATTCTCTGCCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDPLMYG*ILCLVS
Trigger: GGACACAAGGCAGAGAATGCAACCGTACATCAGAGG...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCCTCTCTGGTTGCAATaGCATTGTATATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILPLWLQ*HCILLR
Trigger: CCTCAGCAATATACAATGGCATTGCAACCAGAGAGG...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR GCA 90 bp TTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATGGGCACCTCTCTGGTTaGAATGCCATTGTATATTGC +
Preference number: 4 (lower is better)
Translates to: LLALHRDGHLSGCNAIVYGHLSG*NAIVYC
Trigger: GCAATATACAATGGCATTGCAACCAGAGAGGTGCCC...ATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATCAAGGCTGGATGGAGTaGTTACTTGCAAGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDQGWME*LLASVD
Trigger: GTCCACACTTGCAAGTAACCACTCCATCCAGCCTTG...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATTTGCCCAAGGCTGGATaGAGTGGTTACTTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDLPKAG*SGYLQV
Trigger: CACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAA...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR TCA 90 bp CTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAGAAATCCACATGATTaGTGGGTTGATCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: LQESTLLALHRDGHLSGCRNPHD*WVDQIK
Trigger: CTTTATCTGATCAACCCATCAATCATGTGGATTTCT...GCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR GCA 90 bp TTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATCCTCTCTGGTTGCAATaGCATTGTATATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLALHRDGHLSGCNAIVYPLWLQ*HCILLR
Trigger: CCTCAGCAATATACAATGGCATTGCAACCAGAGAGG...ATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CCA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATTGCTATATACCTTATaGAGGTTTTTCCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQLLYTL*RFFQIL
Trigger: GAGAATCTGGAAAAACCTCCATAAGGTATATAGCAA...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR TCA 90 bp TTGGAAGTACATGAAAGGGTAAGTCAGCACCCAATGCTTATGTTAACTTTTCAATCAAGGATCTTATCCTaGGTATGGCAGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEVHERVSQHPMLMLTFQSRILS*VWQASW
Trigger: CCAGGAGGCCTGCCATACTCAGGATAAGATCCTTGA...TTGAAAAGTTAACATAAGCATTGGGTGCTGACTTACCCTTTCATGTACTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS GCA 90 bp CATCCAGTTTCCTTGGGCTCCGTAGGGGAACAGCACGAGCAGGGCTaGCCACAGCGCGCACAAGCGGGCCAGTCCCAGGAGCGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: HPVSLGSVGEQHEQG*PQRAQAGQSQERRP
Trigger: AGGGCGGCGCTCCTGGGACTGGCCCGCTTGTGCGCGCTGTGGGCAGCCCTGCTCGTGCTGTTCCCCTACGGAGCCCAAGGAAACTGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS GCA 90 bp GCCGGGCGCCCTCTCGGATGCTCGGCAGCAGGTACGGTTTCCTCTTaGACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAATTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: AGRPLGCSAAGTVSS*TAPSGGCSAANWRS
Trigger: GCTGCGCCAATTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCGAGCATCCGAGAGGGCGCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS TCA 90 bp ATCATGCAGTTCCATCTCTCGTGTCTGAACTGGCTCCCGCACTCCTaGATGCCCAGCCGGGCGCCCTCTCGGATGCTCGGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: IMQFHLSCLNWLPHS*MPSRAPSRMLGSRY
Trigger: GTACCTGCTGCCGAGCATCCGAGAGGGCGCCCGGCTGGGCATTCAGGAGTGCGGGAGCCAGTTCAGACACGAGAGATGGAACTGCATGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 90 bp GTTTCCTCTTGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAATTaGCGCAGCCCAGCTTCTCTGGAACCCCGAAGGAGGCAATGCCCA +
Preference number: 5 (lower is better)
Translates to: VSSCTAPSGGCSAAN*RSPASLEPRRRQCP
Trigger: TGGGCATTGCCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 90 bp CTTCTGGCGGCTGTTCAGCGGCAAATTGGCGCAGCCCAGCTTCTCTaGAACCCCGAAGGAGGCAATGCCCAACCACATCCAGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLAAVQRQIGAAQLL*NPEGGNAQPHPVSL
Trigger: CAAGGAAACTGGATGTGGTTGGGCATTGCCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAGCCGCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS GCA 90 bp AGCCGCCGTTCTGCAAGGTGGTGTCACAGGAACACTCTGTCATGTTaGCTGCACTGCATGACCTGGTCACAGAATGCACCAGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SRRSARWCHRNTLSC*LHCMTWSQNAPGLQ
Trigger: CTGCAGGCCTGGTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTCCTGTGACACCACCTTGCAGAACGGCGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGCGGGCCGCAGGTCAGTaGTCCAGCACCAAGTTATCC +
Preference number: 5 (lower is better)
Translates to: STARVNFTSAAQGWAPLWRAAGQ*SSTKLS
Trigger: GGATAACTTGGTGCTGGACAACTGACCTGCGGCCCG...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CAA 90 bp CCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTAGTGCCAGCCTTCACTaGCTGAGCCGCCGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PLQESTLLALHRDGHLSGSASLH*LSRRSA
Trigger: TGCAGAACGGCGGCTCAGCAAGTGAAGGCTGGCACT...ACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 90 bp CCCTGTGAAGAGGGTCTCCCTGAGGCAAGTGGTGAGCTGCATGGGTaGCTTTCCATCTTTCTGGCTTTGCCCTCTGTGGTTTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: PCEEGLPEASGELHG*LSIFLALPSVVFAG
Trigger: GCCTGCAAAAACCACAGAGGGCAAAGCCAGAAAGATGGAAAGGCACCCATGCAGCTCACCACTTGCCTCAGGGAGACCCTCTTCACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS-3UTR CAA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCCAGCTTCCCCCTCGTTaGCAGGGAGCTGTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCQLPPR*QGAVGE
Trigger: CTCTCCTACAGCTCCCTGCAAACGAGGGGGAAGCTG...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CAA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCCCACAGCAGAGGAGGTaGCAGCCATCTGCACCCTCT +
Preference number: 5 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCPQQRR*QPSAPS
Trigger: AGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTGG...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 90 bp TCTGCAAGGTGGTGTCACAGGAACACTCTGTCATGTTGCCTGCACTaGATGACCTGGTCACAGAATGCACCAGGCCTGCAGCCATCACAG +
Preference number: 5 (lower is better)
Translates to: SARWCHRNTLSCCLH*MTWSQNAPGLQPSQ
Trigger: CTGTGATGGCTGCAGGCCTGGTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTCCTGTGACACCACCTTGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp ACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCTGTTCAGCGGCAAATaGGCGCAGCCCAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TARVNFTSAAQGWAPLWLLFSGK*AQPSFS
Trigger: AGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAG...CAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTAAGTGCCAGCCTTCACTaGCTGAGCCGCCGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVSASLH*LSRRSA
Trigger: TGCAGAACGGCGGCTCAGCAAGTGAAGGCTGGCACT...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp GGGATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCGTTGCATTCTCTGCCTaGTGTCCCTGGGATTCCCAG +
Preference number: 5 (lower is better)
Translates to: GIPLQESTLLALHRDGHLVAFSA*CPWDSQ
Trigger: CTGGGAATCCCAGGGACACAAGGCAGAGAATGCAAC...GAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 90 bp ATGGTTTTCCAGCATGTTTTCACAGCACAGGAGCCGGAAACTCCGTaGCAGCGGCAGTCTACTGACATCAACTTGGCGACAGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: MVFQHVFTAQEPETP*QRQSTDINLATACL
Trigger: AAGGCAGGCTGTCGCCAAGTTGATGTCAGTAGACTGCCGCTGCCACGGAGTTTCCGGCTCCTGTGCTGTGAAAACATGCTGGAAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp GGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GTSLVAMPLYIAEASCPRRYGFL*HSSFWR
Trigger: CCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCT...CCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTAAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVRYGFL*HSSFWR
Trigger: CCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCT...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGATAAATGCTGTCTCTTaGGTGCCGCTGCTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: STARVNFTSAAQGWAPLWINAVS*VPLLSS
Trigger: CGAGCTGAGCAGCGGCACCAAAGAGACAGCATTTAT...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTCTACTGACATCAACTaGGCGACAGCCTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: STARVNFTSAAQGWAPLWSTDIN*ATACLP
Trigger: TGGAAGGCAGGCTGTCGCCAAGTTGATGTCAGTAGA...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTCCACATCCAGTTTCCTaGGGCTCCGTAGGGGAACAG +
Preference number: 5 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLPHPVS*GSVGEQ
Trigger: CTGTTCCCCTACGGAGCCCAAGGAAACTGGATGTGG...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CAA 90 bp CTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCGAACACTCTGTCATGTaGCCTGCACTGCATGACCTG +
Preference number: 5 (lower is better)
Translates to: LALHRDGHLSGCNAIVYCEHSVM*PALHDL
Trigger: CAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTC...GCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp GATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCCCCTCTGATGTACGGTaGCATTCTCTGCCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: DSTARVNFTSAAQGWAPLPSDVR*HSLPCV
Trigger: GACACAAGGCAGAGAATGCAACCGTACATCAGAGGG...GAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGGGATGGAGTGGTTACTaGCAAGTGTGGACATCAGTC +
Preference number: 5 (lower is better)
Translates to: STARVNFTSAAQGWAPLWGWSGY*QVWTSV
Trigger: GACTGATGTCCACACTTGCAAGTAACCACTCCATCC...CCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 90 bp CACAGCAGAGGAGGTTGCAGCCATCTGCACCCTCTGATGTACGGTTaGATTCTCTGCCTTGTGTCCCTGGGATTCCCAGTTTCTTATCTT +
Preference number: 5 (lower is better)
Translates to: HSRGGCSHLHPLMYG*ILCLVSLGFPVSYL
Trigger: AAGATAAGAAACTGGGAATCCCAGGGACACAAGGCAGAGAATGCAACCGTACATCAGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCCCTCTGATGTACGGTaGCATTCTCTGCCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILPSDVR*HSLPCV
Trigger: GACACAAGGCAGAGAATGCAACCGTACATCAGAGGG...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 90 bp GGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTaGCCAAGGCTGGATGGAGTGGTTACTTGCAAGTGTGGACATCAG +
Preference number: 5 (lower is better)
Translates to: GTSLVAMPLYIAEAS*PRLDGVVTCKCGHQ
Trigger: CTGATGTCCACACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp CTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAACACTCTGTCATGTaGCCTGCACTGCATGACCTG +
Preference number: 5 (lower is better)
Translates to: LWLQCHCILLRHLAQGWMEHSVM*PALHDL
Trigger: CAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTC...CATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAGTCTACTGACATCAACTaGGCGACAGCCTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: WLQCHCILLRHLAQGWMESTDIN*ATACLP
Trigger: TGGAAGGCAGGCTGTCGCCAAGTTGATGTCAGTAGA...CTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp CCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTCTGGTTGCAATGCCATaGTATATTGCTGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: PLQESTLLALHRDGHLSGLVAMP*YIAEAS
Trigger: AGATGCCTCAGCAATATACAATGGCATTGCAACCAG...ACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp ACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGTCGCCCTCTTCCTCCTaGCATACAACATTAAAAGGC +
Preference number: 5 (lower is better)
Translates to: TSAAQGWAPLWLQCHCILSPSSS*HTTLKG
Trigger: GCCTTTTAATGTTGTATGCAAGGAGGAAGAGGGCGA...CAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CAA 90 bp TTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATGGATGGAGTGGTTACTaGCAAGTGTGGACATCAGTC +
Preference number: 5 (lower is better)
Translates to: LLALHRDGHLSGCNAIVYGWSGY*QVWTSV
Trigger: GACTGATGTCCACACTTGCAAGTAACCACTCCATCC...ATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp ACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATGGGCACCTCTCTGGTaGCAATGCCATTGTATATTG +
Preference number: 5 (lower is better)
Translates to: TLLALHRDGHLSGCNAIVWAPLW*QCHCIL
Trigger: CAATATACAATGGCATTGCAACCAGAGAGGTGCCCA...TACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp CAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATTGGGCACCTCTCTGGTaGCAATGCCATTGTATATTG +
Preference number: 5 (lower is better)
Translates to: QESTLLALHRDGHLSGCNWAPLW*QCHCIL
Trigger: CAATATACAATGGCATTGCAACCAGAGAGGTGCCCA...ATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 90 bp TGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAGTaGTTACTTGCAAGTGTGGACATCAGTCATGCTTTCACACCTCCT +
Preference number: 5 (lower is better)
Translates to: CHCILLRHLAQGWME*LLASVDISHAFTPP
Trigger: AGGAGGTGTGAAAGCATGACTGATGTCCACACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp GATTCCACTGCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGCCTTCCAGCTTCATaGTTATGTAGGTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: DSTARVNFTSAAQGWAPLCLPAS*LCRFIA
Trigger: AGCAATGAACCTACATAACAATGAAGCTGGAAGGCA...GAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGCAGTGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 90 bp TGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTaGATGGAGTGGTTACTTGCAAGTGTGGACATCAGTCATGCTTTC +
Preference number: 5 (lower is better)
Translates to: WLQCHCILLRHLAQG*MEWLLASVDISHAF
Trigger: GAAAGCATGACTGATGTCCACACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAGAGTACTTTGTTTTCTTaGCCCGTGGTGTTTCCGATG +
Preference number: 5 (lower is better)
Translates to: WLQCHCILLRHLAQGWMESTLFS*PVVFPM
Trigger: CATCGGAAACACCACGGGCAAAGAAAACAAAGTACT...CTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp GCAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAAATTGCTAATAGTACTTaGTTTTCTTTGCCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: ARVNFTSAAQGWAPLWLQIANST*FSLPVV
Trigger: CACCACGGGCAAAGAAAACAAAGTACTATTAGCAAT...TTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp CTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGCAATGCCATTGTATATaGCTGAGGCATCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: LWLQCHCILLRHLAQGWMQCHCI*LRHLAQ
Trigger: TTGGGCAAGATGCCTCAGCAATATACAATGGCATTG...CATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp CAGGGATGGGCACCTCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTCTGGTTGCAATGCCATaGTATATTGCTGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: QGWAPLWLQCHCILLRHLLVAMP*YIAEAS
Trigger: AGATGCCTCAGCAATATACAATGGCATTGCAACCAG...AAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGAGGTGCCCATCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp CAAGAGTCAACTTTACTAGCGCTGCACAGGGATGGGCACCTCTCTGGTTGCAATGTTCACCCACCATTATaGAGTCCTGTAACTAAGTTC +
Preference number: 5 (lower is better)
Translates to: QESTLLALHRDGHLSGCNVHPPL*SPVTKF
Trigger: GAACTTAGTTACAGGACTCAATAATGGTGGGTGAAC...ATTGCAACCAGAGAGGTGCCCATCCCTGTGCAGCGCTAGTAAAGTTGACTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CAA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATAGTACTTTGTTTTCTTaGCCCGTGGTGTTTCCGATG +
Preference number: 5 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDSTLFS*PVVFPM
Trigger: CATCGGAAACACCACGGGCAAAGAAAACAAAGTACT...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TTGGAAGTACATGAAAGGGTAAGTCAGCACCCAATGCTTATGTTAACTTTTCAACCACAGCAGAGGAGGTaGCAGCCATCTGCACCCTCT +
Preference number: 5 (lower is better)
Translates to: LEVHERVSQHPMLMLTFQPQQRR*QPSAPS
Trigger: AGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTGG...TTGAAAAGTTAACATAAGCATTGGGTGCTGACTTACCCTTTCATGTACTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CAA 90 bp TCTCTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATCAATGCCATTGTATATaGCTGAGGCATCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: SLVAMPLYIAEASCPRLDQCHCI*LRHLAQ
Trigger: TTGGGCAAGATGCCTCAGCAATATACAATGGCATTG...ATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTGCCCAAGGCTGGATGGAGATTGCTAATAGTACTTaGTTTTCTTTGCCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: WLQCHCILLRHLAQGWMEIANST*FSLPVV
Trigger: CACCACGGGCAAAGAAAACAAAGTACTATTAGCAAT...CTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS-3UTR CAA 90 bp TTGGAAGTACATGAAAGGGTAAGTCAGCACCCAATGCTTATGTTAACTTTTCAAATAAATGCTGTCTCTTaGGTGCCGCTGCTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LEVHERVSQHPMLMLTFQINAVS*VPLLSS
Trigger: CGAGCTGAGCAGCGGCACCAAAGAGACAGCATTTAT...TTGAAAAGTTAACATAAGCATTGGGTGCTGACTTACCCTTTCATGTACTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS-3UTR CAA 90 bp TTGGAAGTACATGAAAGGGTAAGTCAGCACCCAATGCTTATGTTAACTTTTCAATGCCTTCCAGCTTCATaGTTATGTAGGTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: LEVHERVSQHPMLMLTFQCLPAS*LCRFIA
Trigger: AGCAATGAACCTACATAACAATGAAGCTGGAAGGCA...TTGAAAAGTTAACATAAGCATTGGGTGCTGACTTACCCTTTCATGTACTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS TCA 72 bp TTCCATCTCTCGTGTCTGAACTGGCTCCCGCACTCCTaGATGCCCAGCCGGGCGCCCTCTCGGATGCTCGGC +
Preference number: 6 (lower is better)
Translates to: FHLSCLNWLPHS*MPSRAPSRMLG
Trigger: GCCGAGCATCCGAGAGGGCGCCCGGCTGGGCATTCAGGAGTGCGGGAGCCAGTTCAGACACGAGAGATGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp CGCACTCCTGAATGCCCAGCCGGGCGCCCTCTCGGATaGTCGGCAGCAGGTACGGTTTCCTCTTGCACAGCT +
Preference number: 6 (lower is better)
Translates to: RTPECPAGRPLG*SAAGTVSSCTA
Trigger: AGCTGTGCAAGAGGAAACCGTACCTGCTGCCGAGCATCCGAGAGGGCGCCCGGCTGGGCATTCAGGAGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CAA 72 bp ACCCCCTCCCCAGAGGCCCTTCGGGCCGCAGGTCAGTaGTCCAGCACCAAGTTATCCCTCGCCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: TPSPEALRAAGQ*SSTKLSLALFL
Trigger: GAGGAAGAGGGCGAGGGATAACTTGGTGCTGGACAACTGACCTGCGGCCCGAAGGGCCTCTGGGGAGGGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS CAA 90 bp AGCCGGGCGCCCTCTCGGATGCTCGGCAGCAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAATTGGCGCAG +
Preference number: 6 (lower is better)
Translates to: SRAPSRMLGSRYGFL*HSSFWRLFSGKLAQ
Trigger: CTGCGCCAATTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCGAGCATCCGAGAGGGCGCCCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 72 bp TGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAATTaGCGCAGCCCAGCTTCTCTGGAACCCCGAAGGAGG +
Preference number: 6 (lower is better)
Translates to: CTAPSGGCSAAN*RSPASLEPRRR
Trigger: CCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CAA 90 bp GGTTTCCTCTTGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAATaGGCGCAGCCCAGCTTCTCTGGAACCCCGAAGGAGGCAATGCCC +
Preference number: 6 (lower is better)
Translates to: GFLLHSSFWRLFSGK*AQPSFSGTPKEAMP
Trigger: GGGCATTGCCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CAA 72 bp TTGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAATaGGCGCAGCCCAGCTTCTCTGGAACCCCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LHSSFWRLFSGK*AQPSFSGTPKE
Trigger: CTCCTTCGGGGTTCCAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CAA 72 bp CCCTCTCGGATGCTCGGCAGCAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAA +
Preference number: 6 (lower is better)
Translates to: PSRMLGSRYGFL*HSSFWRLFSGK
Trigger: TTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCGAGCATCCGAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS TCA 72 bp ACAGGAGCCGGAAACTCCGTGGCAGCGGCAGTCTACTaGCATCAACTTGGCGACAGCCTGCCTTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: TGAGNSVAAAVY*HQLGDSLPSSF
Trigger: GAAGCTGGAAGGCAGGCTGTCGCCAAGTTGATGTCAGTAGACTGCCGCTGCCACGGAGTTTCCGGCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp CCTCTCGGATGCTCGGCAGCAGGTACGGTTTCCTCTTaGACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAAT +
Preference number: 6 (lower is better)
Translates to: PLGCSAAGTVSS*TAPSGGCSAAN
Trigger: ATTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCGAGCATCCGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 72 bp GCTGTTCAGCGGCAAATTGGCGCAGCCCAGCTTCTCTaGAACCCCGAAGGAGGCAATGCCCAACCACATCCA +
Preference number: 6 (lower is better)
Translates to: AVQRQIGAAQLL*NPEGGNAQPHP
Trigger: TGGATGTGGTTGGGCATTGCCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222462.3
CDS CAA 90 bp GAGCCGCCGTTCTGCAAGGTGGTGTCACAGGAACACTCTGTCATGTaGCCTGCACTGCATGACCTGGTCACAGAATGCACCAGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: EPPFCKVVSQEHSVM*PALHDLVTECTRPA
Trigger: TGCAGGCCTGGTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTCCTGTGACACCACCTTGCAGAACGGCGGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS TCA 72 bp GCCACAGCAGAGGAGGTTGCAGCCATCTGCACCCTCTaGTGTACGGTTGCATTCTCTGCCTTGTGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: ATAEEVAAICTL*CTVAFSALCPW
Trigger: CCAGGGACACAAGGCAGAGAATGCAACCGTACATCAGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp CCCCAGTGCCAGCCTTCACTTGCTGAGCCGCCGTTCTaGAAGGTGGTGTCACAGGAACACTCTGTCATGTTG +
Preference number: 6 (lower is better)
Translates to: PQCQPSLAEPPF*KVVSQEHSVML
Trigger: CAACATGACAGAGTGTTCCTGTGACACCACCTTGCAGAACGGCGGCTCAGCAAGTGAAGGCTGGCACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 72 bp GCCAGCCTTCACTTGCTGAGCCGCCGTTCTGCAAGGTaGTGTCACAGGAACACTCTGTCATGTTGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: ASLHLLSRRSAR*CHRNTLSCCLH
Trigger: GTGCAGGCAACATGACAGAGTGTTCCTGTGACACCACCTTGCAGAACGGCGGCTCAGCAAGTGAAGGCTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp CCTGTGAAGAGGGTCTCCCTGAGGCAAGTGGTGAGCTaGATGGGTGCCTTTCCATCTTTCTGGCTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: PVKRVSLRQVVS*MGAFPSFWLCP
Trigger: AGGGCAAAGCCAGAAAGATGGAAAGGCACCCATGCAGCTCACCACTTGCCTCAGGGAGACCCTCTTCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS TCA 72 bp GTCACAGGAACACTCTGTCATGTTGCCTGCACTGCATaGCCTGGTCACAGAATGCACCAGGCCTGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: VTGTLCHVACTA*PGHRMHQACSH
Trigger: ATGGCTGCAGGCCTGGTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTCCTGTGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS TCA 72 bp AAGGAGGCAATGCCCAACCACCATAGGGAGGTCTTTTaGGAAGCCCCTGTGAAGAGGGTCTCCCTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: KEAMPNHHREVF*EAPVKRVSLRQ
Trigger: TTGCCTCAGGGAGACCCTCTTCACAGGGGCTTCTCAAAAGACCTCCCTATGGTGGTTGGGCATTGCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361301.6
CDS GCA 72 bp TGGTGTCACAGGAACACTCTGTCATGTTGCCTGCACTaGATGACCTGGTCACAGAATGCACCAGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: WCHRNTLSCCLH*MTWSQNAPGLQ
Trigger: CTGCAGGCCTGGTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTCCTGTGACACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 72 bp CAGCATGTTTTCACAGCACAGGAGCCGGAAACTCCGTaGCAGCGGCAGTCTACTGACATCAACTTGGCGACA +
Preference number: 6 (lower is better)
Translates to: QHVFTAQEPETP*QRQSTDINLAT
Trigger: TGTCGCCAAGTTGATGTCAGTAGACTGCCGCTGCCACGGAGTTTCCGGCTCCTGTGCTGTGAAAACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CAA 72 bp AGGAGGTTGCAGCCATCTGCACCCTCTGATGTACGGTaGCATTCTCTGCCTTGTGTCCCTGGGATTCCCAGT +
Preference number: 6 (lower is better)
Translates to: RRLQPSAPSDVR*HSLPCVPGIPS
Trigger: ACTGGGAATCCCAGGGACACAAGGCAGAGAATGCAACCGTACATCAGAGGGTGCAGATGGCTGCAACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CAA 90 bp CCACAGCAGAGGAGGTTGCAGCCATCTGCACCCTCTGATGTACGGTaGCATTCTCTGCCTTGTGTCCCTGGGATTCCCAGTTTCTTATCT +
Preference number: 6 (lower is better)
Translates to: PQQRRLQPSAPSDVR*HSLPCVPGIPSFLS
Trigger: AGATAAGAAACTGGGAATCCCAGGGACACAAGGCAGAGAATGCAACCGTACATCAGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp TCTGCAAGGTGGTGTCACAGGAACACTCTGTCATGTTaGCTGCACTGCATGACCTGGTCACAGAATGCACCA +
Preference number: 6 (lower is better)
Translates to: SARWCHRNTLSC*LHCMTWSQNAP
Trigger: TGGTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTCCTGTGACACCACCTTGCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp GAGGCATCTTGCCCAAGGCTGGATGGAGTGGTTACTTaGAAGTGTGGACATCAGTCATGCTTTCACACCTCC +
Preference number: 6 (lower is better)
Translates to: EASCPRLDGVVT*KCGHQSCFHTS
Trigger: GGAGGTGTGAAAGCATGACTGATGTCCACACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAAGATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS CCA 72 bp TTGCCCAAGGCTGGATGGAGTGGTTACTTGCAAGTGTaGACATCAGTCATGCTTTCACACCTCCTGCAACGG +
Preference number: 6 (lower is better)
Translates to: LPKAGWSGYLQV*TSVMLSHLLQR
Trigger: CCGTTGCAGGAGGTGTGAAAGCATGACTGATGTCCACACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp GATGGAGTGGTTACTTGCAAGTGTGGACATCAGTCATaGTTTCACACCTCCTGCAACGGACATAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: DGVVTCKCGHQS*FHTSCNGHSST
Trigger: GGTGCTGCTATGTCCGTTGCAGGAGGTGTGAAAGCATGACTGATGTCCACACTTGCAAGTAACCACTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS TCA 72 bp TGGTGTTTCCGATGGGGAAATCTAGGAACTTTCTGCTaGACCACATGCCATACTGGACATCATCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: WCFRWGNLGTFC*TTCHTGHHRSS
Trigger: GCTGCTCCGATGATGTCCAGTATGGCATGTGGTTCAGCAGAAAGTTCCTAGATTTCCCCATCGGAAACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6
CDS GCA 72 bp CTGGTTGCAATGCCATTGTATATTGCTGAGGCATCTTaGCCAAGGCTGGATGGAGTGGTTACTTGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: LVAMPLYIAEAS*PRLDGVVTCKC
Trigger: ACACTTGCAAGTAACCACTCCATCCAGCCTTGGGCAAGATGCCTCAGCAATATACAATGGCATTGCAACCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222462.3
ENST00000361301.6