RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000126562

Ensembl transcript IDs: ENST00000246914.10, ENST00000587705.5, ENST00000587745.1, ENST00000591448.5, ENST00000592072.1, ENST00000592669.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCCTGGGGGCTCAGAGCGCTGTAGGCTGTTGCGGCGGGAGGTaGGGAAGCTGCCCTTGGAGAGGCGGCGCTGGCGGCTGGACAGCA +
Preference number: 1 (lower is better)
Translates to: QGLGAQSAVGCCGGR*GSCPWRGGAGGWTA
Trigger: TGCTGTCCAGCCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCCCCACCTCCCGCCGCAACAGCCTACAGCGCTCTGAGCCCCCAGGCCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 90 bp GCTGCCCTTGGAGAGGCGGCGCTGGCGGCTGGACAGCATAGCAGCTaGGGCCACAATACCCGGTGGGGGCTGCTTCCCCAGCCGGCTGTA +
Preference number: 1 (lower is better)
Translates to: AALGEAALAAGQHSS*GHNTRWGLLPQPAV
Trigger: TACAGCCGGCTGGGGAAGCAGCCCCCACCGGGTATTGTGGCCCCAGCTGCTATGCTGTCCAGCCGCCAGCGCCGCCTCTCCAAGGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 90 bp ATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTaGTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGC +
Preference number: 1 (lower is better)
Translates to: ILPTSPANVTPLLAR*SWEPVLLPLREFLR
Trigger: GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 90 bp CCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTaGTCTCTGGCCCGCCTCCAGCACTGTCCTCTGTATCTGAGCTCT +
Preference number: 1 (lower is better)
Translates to: PPDPQLHGRSQPELP*SLARLQHCPLYLSS
Trigger: AGAGCTCAGATACAGAGGACAGTGCTGGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 90 bp CCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTGCTCCTaGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCATGATG +
Preference number: 1 (lower is better)
Translates to: PTSPANVTPLLARCS*EPVLLPLREFLRMM
Trigger: CATCATGCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 90 bp TCTGAATTCACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTaGTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAG +
Preference number: 1 (lower is better)
Translates to: SEFTSCQHPRRMSPP*LPAAPGSRCCCHSE
Trigger: CTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGAATTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 90 bp AATTCACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTGCTTaGCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTT +
Preference number: 1 (lower is better)
Translates to: NSHPANIPGECHPLA*PLLLGAGAAATQRV
Trigger: AACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 90 bp TGCTGGTGGAGGTCCTGGCTCTGGTGGGAGTGCCTCCAATTCCCTTaGTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCG +
Preference number: 1 (lower is better)
Translates to: CWWRSWLWWECLQFP*FTQLLTLSLDGSNP
Trigger: CGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCACTCCCACCAGAGCCAGGACCTCCACCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 90 bp GGCCATGGGCACAGTTGCTGGTGGAGGTCCTGGCTCTGGTGGGAGTaGCTCCAATTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTG +
Preference number: 1 (lower is better)
Translates to: GHGHSCWWRSWLWWE*LQFPCFTQLLTLSL
Trigger: CAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCACTCCCACCAGAGCCAGGACCTCCACCAGCAACTGTGCCCATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 90 bp AGTGCCTCCAATTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTaGATGGCAGCAACCCGTTCACGTACTGCACGGGCCACTGGCTGG +
Preference number: 1 (lower is better)
Translates to: SASNSLALRSFSRFR*MAATRSRTARATGW
Trigger: CCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR TCA 90 bp GAGAACGTAGGTGGAGAAGTCGTGGGGAGAGAACTCCAGGGACACTaGGAGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGA +
Preference number: 1 (lower is better)
Translates to: ENVGGEVVGRELQGH*ESGTGNSGVLEENG
Trigger: TCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCTCTCAGTGTCCCTGGAGTTCTCTCCCCACGACTTCTCCACCTACGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR TCA 90 bp GGGGGATGTTGGCTGCAAGGGAAGAGGCTCAGCCGGTTCCTTGGATaGAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTC +
Preference number: 1 (lower is better)
Translates to: GGCWLQGKRLSRFLG*SHLETPNKLRLSLF
Trigger: GAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGCAGCCAACATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 90 bp GGCTGCAAGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTaGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGATGGGC +
Preference number: 1 (lower is better)
Translates to: GCKGRGSAGSLDEVT*KRPTSCGFPSSEMG
Trigger: GCCCATCTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 90 bp CATCTTCCCCACTGCTTTCTGACTCCTCGCTGCTCAAACACAGGCTaGTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: HLPHCFLTPRCSNTG*CRSSSSTLGWDGSG
Trigger: CCCTGAGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAGCGAGGAGTCAGAAAGCAGTGGGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 90 bp CCTCCAATTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATaGCAGCAACCCGTTCACGTACTGCACGGGCCACTGGCTGGTAAT +
Preference number: 1 (lower is better)
Translates to: PPIPLLYAASHAFAG*QQPVHVLHGPLAGN
Trigger: ATTACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 90 bp AGGGGAACTAAGAGTGACCTGAGAACAAGTGGGAGAGAACGTAGGTaGAGAAGTCGTGGGGAGAGAACTCCAGGGACACTGAGAGAGTGG +
Preference number: 1 (lower is better)
Translates to: RGTKSDLRTSGRERR*RSRGERTPGTLREW
Trigger: CCACTCTCTCAGTGTCCCTGGAGTTCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR TCA 90 bp ACTCTGCAGCTCAGCCCAGAACTCCTCATCTTCCCCACTGCTTTCTaGCTCCTCGCTGCTCAAACACAGGCTGCTGTAGGAGTAGTTCAT +
Preference number: 1 (lower is better)
Translates to: TLQLSPELLIFPTAF*LLAAQTQAAVGVVH
Trigger: ATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAGCGAGGAGTCAGAAAGCAGTGGGGAAGATGAGGAGTTCTGGGCTGAGCTGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 90 bp TTCACATATGTTTGGCTCTTCACTATAATGGAGCTGCACTCTCCATaGCCCCCTGGCCTTCTACCCCTTCAGTGTTGGGATCTTCCTTGC +
Preference number: 1 (lower is better)
Translates to: FTYVWLFTIMELHSP*PPGLLPLQCWDLPC
Trigger: GCAAGGAAGATCCCAACACTGAAGGGGTAGAAGGCCAGGGGGGCATGGAGAGTGCAGCTCCATTATAGTGAAGAGCCAAACATATGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR CCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTaGGGGAGATACATGGCTTCTGTTCTGAATTCACATCCTGCCAAC +
Preference number: 1 (lower is better)
Translates to: KHQILRTQAPWWALV*GRYMASVLNSHPAN
Trigger: GTTGGCAGGATGTGAATTCAGAACAGAAGCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR GCA 90 bp GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCAACCCGTTCACGTACTaGACGGGCCACTGGCTGGTA +
Preference number: 2 (lower is better)
Translates to: DPQLHGRSQPELPWSLARNPFTY*TGHWLV
Trigger: TACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTT...GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGAGAACACAAGCTCCATaGTGGGCCCTGGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TPAPRPSAARSLSARASLRTQAP*WALVWG
Trigger: CCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCT...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGTTCCCTCTTCAGAGATaGGCGCCAGCCTGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: TPAPRPSAARSLSARASLFPLQR*APAWLP
Trigger: GGGAAGCCAGGCTGGCGCCCATCTCTGAAGAGGGAA...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR GCA 90 bp TCCTCCTGGGGGCTTAGGGTGTCTTCAGCAGCCTCCATGGGGCCAGTGTCTCTCGGCCATGGGCACAGTTaGTGGTGGAGGTCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: SSWGLRVSSAASMGPVSLGHGHS*WWRSWL
Trigger: GAGCCAGGACCTCCACCAGCAACTGTGCCCATGGCC...GAGAGACACTGGCCCCATGGAGGCTGCTGAAGACACCCTAAGCCCCCAGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR GCA 90 bp TGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGATGGGCGCCAGCCTGGGGCTGGTGCTGGTCTaGCTCTGGCTCCTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: WKRPTSCGFPSSEMGASLGLVLV*LWLLRL
Trigger: GAGCCTGAGGAGCCAGAGGCAGACCAGCACCAGCCC...CAGGCTGGCGCCCATCTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CAA 90 bp GAATTCACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTGCTaGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: EFTSCQHPRRMSPPC*PAAPGSRCCCHSES
Trigger: ACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGTCTGGAGCTCTTCATTaGATGGGTCTGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: TPAPRPSAARSLSARASLSGALH*MGLGGG
Trigger: TCCCCCTCCCAGACCCATCCAATGAAGAGCTCCAGA...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR TCA 90 bp AGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCCTCATTTGTATCCGAAGTGGTAGATaGGTAGCTGGCGTGGCGGAA +
Preference number: 2 (lower is better)
Translates to: SRDRGLRRRFLPGGLLICIRSGR*VAGVAE
Trigger: TTCCGCCACGCCAGCTACTCATCTACCACTTCGGAT...ACAAATGAGGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR GCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGAGCTGCACTCTCCATaGCCCCCTGGCCTTCTACCC +
Preference number: 2 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSELHSP*PPGLLP
Trigger: GGGTAGAAGGCCAGGGGGGCATGGAGAGTGCAGCTC...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR-3UTR GCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGAAACGCCCAACAAGCTaGGGCTTTCCCTCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: TPAPRPSAARSLSARASLKRPTS*GFPSSE
Trigger: CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTT...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR GCA 90 bp CTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCTGCCTCCAATTCCCTTaGTTTACGCAGCTTCTCACG +
Preference number: 2 (lower is better)
Translates to: LARCSWEPVLLPLREFLRCLQFP*FTQLLT
Trigger: CGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCA...GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp TCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCCTCATTTGTCCCATCCCTTCTCACGCTTTCGCTaGATGGCAGCAACCCGTTCA +
Preference number: 2 (lower is better)
Translates to: SGSAPEIPPWGSPHLSHPFSRFR*MAATRS
Trigger: TGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAA...GGGATGGGACAAATGAGGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp ACTGAGAGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGAAGTGGAGGGGCACAGTTGCTGGTaGAGGTCCTGGCTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: TERVGPETRVCWRRMEVEGHSCW*RSWLWW
Trigger: CCACCAGAGCCAGGACCTCCACCAGCAACTGTGCCC...CTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCTCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGGGGGACCGGGGGCCATaGGCACAGTTGCTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQGDRGP*AQLLVE
Trigger: CTCCACCAGCAACTGTGCCCATGGCCCCCGGTCCCC...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCACCATCTTGCTGTTATaGGTCTGTAGCTGGCACTCA +
Preference number: 2 (lower is better)
Translates to: DPQLHGRSQPELPWSLARTILLL*VCSWHS
Trigger: TGAGTGCCAGCTACAGACCCATAACAGCAAGATGGT...GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR TCA 90 bp CTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCGAACTAAGAGTGACCTaGGAACAAGTGGGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: LARCSWEPVLLPLREFLRELRVT*EQVGEN
Trigger: GTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTC...GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGTTGGATGAAGTCACTTaGAAACGCCCAACAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TPAPRPSAARSLSARASLLDEVT*KRPTSC
Trigger: GCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR TCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGCCGAGCAGGAGGTGGTaGGGCCTCACTCTCCACCTC +
Preference number: 2 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEPSRRW*GLTLHL
Trigger: GAGGTGGAGAGTGAGGCCTCACCACCTCCTGCTCGG...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp ACTGAGAGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGAAGTGGAGTGGTGGGCCCTGGTGTaGGGGAGATACATGGCTTCT +
Preference number: 2 (lower is better)
Translates to: TERVGPETRVCWRRMEVEWWALV*GRYMAS
Trigger: AGAAGCCATGTATCTCCCCCACACCAGGGCCCACCA...CTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCTCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp GCAGCTGCAATCTCTTCCGGGCTGTCCCCATCCAGATCAAATCGGAAGGTCACCCCGGAGATTCCTCCCTaGGGGTCTCCTCATTTGTCC +
Preference number: 2 (lower is better)
Translates to: AAAISSGLSPSRSNRKVTPEIPP*GSPHLS
Trigger: GGACAAATGAGGAGACCCCCAGGGAGGAATCTCCGG...GGTGACCTTCCGATTTGATCTGGATGGGGACAGCCCGGAAGAGATTGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCCTACCCCTTCAGTGTTaGGATCTTCCTTGCTCAGTT +
Preference number: 2 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCLPLQC*DLPCSV
Trigger: AACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAG...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR-3UTR CCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGTTCATTGGATGGGTCTaGGAGGGGGACGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEFIGWV*EGDGQG
Trigger: GCCCTGCCCGTCCCCCTCCCAGACCCATCCAATGAA...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp AATTCACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTGGGTTCCAGGGGAAAATaGGTTTCCAGGAGACAAAGG +
Preference number: 2 (lower is better)
Translates to: NSHPANIPGECHPLACPLGSRGK*VSRRQR
Trigger: CCTTTGTCTCCTGGAAACCCATTTTCCCCTGGAACC...CAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGGGGACTAGGAGGGGCTaGAGGAGACTGGGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEGTRRG*RRLGKE
Trigger: CTCCTTTCCCAGTCTCCTCCAGCCCCTCCTAGTCCC...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp GTGTCTCTCTTCAACAGGGTCTCCACTCGCTGGATAATCTCCCGAATCCGTCTGGGCCAGAACGTGGAATaGATAGGGCAAAAGCCGAGG +
Preference number: 2 (lower is better)
Translates to: VSLFNRVSTRWIISRIRLGQNVE*IGQKPR
Trigger: CCTCGGCTTTTGCCCTATCCATTCCACGTTCTGGCC...CAGACGGATTCGGGAGATTATCCAGCGAGTGGAGACCCTGTTGAAGAGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGGGGACACTGAGAGAGTaGGACCGGAAACTCGGGTGT +
Preference number: 2 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEGTLRE*DRKLGC
Trigger: ACACCCGAGTTTCCGGTCCCACTCTCTCAGTGTCCC...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTTGGAGGTCCTGGCTCTaGTGGGAGTGCCTCCAATTC +
Preference number: 2 (lower is better)
Translates to: VDQKASDSENTSSMVGPGWRSWL*WECLQF
Trigger: GAATTGGAGGCACTCCCACCAGAGCCAGGACCTCCA...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGTGTGCTGGAGGAGAATaGAAGTGGAGAGCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSECAGGE*KWRAGG
Trigger: CCCACCAGCTCTCCACTTCCATTCTCCTCCAGCACA...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTCCATGGTGGGCCCTaGTGTGGGGGAGATACATGG +
Preference number: 2 (lower is better)
Translates to: VGSRTNTSTQQTVHICLALHGGP*CGGDTW
Trigger: CCATGTATCTCCCCCACACCAGGGCCCACCATGGAG...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR-3UTR CCA 90 bp GTTTCCACCTCTGACAAGTGCTTCTGCCGAAGACTCTGCAGCTCAGCCCAGAACGGATTTGAGGAGACCTaGGAAGAAATGGGGGAGAAT +
Preference number: 2 (lower is better)
Translates to: VSTSDKCFCRRLCSSAQNGFEET*EEMGEN
Trigger: ATTCTCCCCCATTTCTTCCCAGGTCTCCTCAAATCC...GTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR GCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAGAGCTGCACTCTCCATaGCCCCCTGGCCTTCTACCC +
Preference number: 2 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIELHSP*PPGLLP
Trigger: GGGTAGAAGGCCAGGGGGGCATGGAGAGTGCAGCTC...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR-3UTR CCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAACACAAGCTCCATGGTaGGCCCTGGTGTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPTQAPW*ALVWGR
Trigger: TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGT...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR-3UTR CCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCACGCTTTCGCTGGATaGCAGCAACCCGTTCACGTA +
Preference number: 2 (lower is better)
Translates to: VGSRTNTSTQQTVHICLAHAFAG*QQPVHV
Trigger: TACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTG...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CAA 90 bp GGCCTTCTACCCCTTCAGTGTTGGGATCTTCCTTGCTCAGTTTTGTaGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: GLLPLQCWDLPCSVL*IRKHQILRTQAPWW
Trigger: CCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR CAA 90 bp CCTGGCCTTCTACCCCTTCAGTGTTGGGATCTTCCTTGCTCAGTTTaGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGG +
Preference number: 2 (lower is better)
Translates to: PGLLPLQCWDLPCSV*LIRKHQILRTQAPW
Trigger: CCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAGAAGGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR-3UTR GCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTGGCTCTGGTGGGAGTaGCTCCAATTCCCTTGCTTT +
Preference number: 2 (lower is better)
Translates to: SRTNTSTQQTVHICLALHWLWWE*LQFPCF
Trigger: AAAGCAAGGGAATTGGAGGCACTCCCACCAGAGCCA...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAAGGTCCTGGCTCTGGTaGGAGTGCCTCCAATTCCCT +
Preference number: 2 (lower is better)
Translates to: NTSTQQTVHICLALHYNGRSWLW*ECLQFP
Trigger: AGGGAATTGGAGGCACTCCCACCAGAGCCAGGACCT...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR TCA 90 bp AAATCCATCTCGCTCCGAAGGCAGAATGAACTCGTTATATACCATGGCAGCTGCGAAAGCATCAGATTCTaGGAACACAAGCTCCATGGT +
Preference number: 2 (lower is better)
Translates to: KSISLRRQNELVIYHGSCESIRF*EHKLHG
Trigger: ACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTC...GCAGCTGCCATGGTATATAACGAGTTCATTCTGCCTTCGGAGCGAGATGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAACAGTTCACATATGTTTaGCTCTTCACTATAATGGAG +
Preference number: 2 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQQFTYV*LFTIME
Trigger: CTCCATTATAGTGAAGAGCCAAACATATGTGAACTG...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR-3UTR CCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAACCACTCTGTCATTCTaGTCTGAGACACTAGTGACC +
Preference number: 2 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPTTLSF*SETLVT
Trigger: GGTCACTAGTGTCTCAGACCAGAATGACAGAGTGGT...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp GGGGCTCAGAGCGCTGTAGGCTGTTGCGGCGGGAGGTaGGGAAGCTGCCCTTGGAGAGGCGGCGCTGGCGGC +
Preference number: 3 (lower is better)
Translates to: GAQSAVGCCGGR*GSCPWRGGAGG
Trigger: GCCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCCCCACCTCCCGCCGCAACAGCCTACAGCGCTCTGAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CAA 90 bp CCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTGCTCCTGGGAGCCGGTGGGGAAGCTGCCCTaGGAGAGGCGGCGCTGGCGG +
Preference number: 3 (lower is better)
Translates to: PTSPANVTPLLARCSWEPVGKLP*ERRRWR
Trigger: CCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCCCCAC...CGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp GGAGAGGCGGCGCTGGCGGCTGGACAGCATAGCAGCTaGGGCCACAATACCCGGTGGGGGCTGCTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: GEAALAAGQHSS*GHNTRWGLLPQ
Trigger: CTGGGGAAGCAGCCCCCACCGGGTATTGTGGCCCCAGCTGCTATGCTGTCCAGCCGCCAGCGCCGCCTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 72 bp ACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTaGTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: TSCQHPRRMSPP*LPAAPGSRCCC
Trigger: GCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CAA 90 bp CCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTGCTCCTGGGAGCCGCTCTGGAGCTCTTCATaGGATGGGTCTGGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: PTSPANVTPLLARCSWEPLWSSS*DGSGRG
Trigger: CCCCCTCCCAGACCCATCCAATGAAGAGCTCCAGAG...CGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp CCGGCGAATGTCACCCCCTTGCTTGCCCGCTGCTCCTaGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTT +
Preference number: 3 (lower is better)
Translates to: PANVTPLLARCS*EPVLLPLREFL
Trigger: AAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp GGAGGTGGTGAGGCCTCACTCTCCACCTCAGCTGTGTaGGGTGAAGGGCTTTCCTGGCCACCAGGAGCAACG +
Preference number: 3 (lower is better)
Translates to: GGGEASLSTSAV*GEGLSWPPGAT
Trigger: CGTTGCTCCTGGTGGCCAGGAAAGCCCTTCACCCCACACAGCTGAGGTGGAGAGTGAGGCCTCACCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 72 bp TGGAGAAGGCTGTCCAGCTCCTGTGCTCCAGGGAGGTaGTGCTCTGGAGCTCTTCATTGGATGGGTCTGGGA +
Preference number: 3 (lower is better)
Translates to: WRRLSSSCAPGR*CSGALHWMGLG
Trigger: TCCCAGACCCATCCAATGAAGAGCTCCAGAGCAGCACCTCCCTGGAGCACAGGAGCTGGACAGCCTTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp TGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTaGGATTGCTTAGTGGTTGACTCTTGGCAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: WEWAPLEASRLG*DCLVVDSWQGR
Trigger: CCTCCCCTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR CCA 72 bp CCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATaGCAGCAACCCGTTCACGTACTGCACGGGCCACTG +
Preference number: 3 (lower is better)
Translates to: PLLYAASHAFAG*QQPVHVLHGPL
Trigger: CAGTGGCCCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp GACACTGAGAGAGTGGGACCGGAAACTCGGGTGTGCTaGAGGAGAATGGAAGTGGAGAGCTGGTGGGGTGTG +
Preference number: 3 (lower is better)
Translates to: DTERVGPETRVC*RRMEVESWWGV
Trigger: CACACCCCACCAGCTCTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCTCTCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 72 bp AGGTCCTGGCTCTGGTGGGAGTGCCTCCAATTCCCTTaGTTTACGCAGCTTCTCACGCTTTCGCTGGATGGC +
Preference number: 3 (lower is better)
Translates to: RSWLWWECLQFP*FTQLLTLSLDG
Trigger: GCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCACTCCCACCAGAGCCAGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 72 bp CACAGTTGCTGGTGGAGGTCCTGGCTCTGGTGGGAGTaGCTCCAATTCCCTTGCTTTACGCAGCTTCTCACG +
Preference number: 3 (lower is better)
Translates to: HSCWWRSWLWWE*LQFPCFTQLLT
Trigger: CGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCACTCCCACCAGAGCCAGGACCTCCACCAGCAACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CAA 90 bp TGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGATGGGCGCCAGCCTGTCTACCCCTTCAGTGTaGGGATCTTCCTTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: WKRPTSCGFPSSEMGASLSTPSV*GSSLLS
Trigger: ACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAGA...CAGGCTGGCGCCCATCTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 72 bp TCCTTGGATGAAGTCACTTGGAAACGCCCAACAAGCTaGGGCTTTCCCTCTTCAGAGATGGGCGCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: SLDEVTWKRPTS*GFPSSEMGASL
Trigger: CAGGCTGGCGCCCATCTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp AATTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTaGATGGCAGCAACCCGTTCACGTACTGCACGGGCC +
Preference number: 3 (lower is better)
Translates to: NSLALRSFSRFR*MAATRSRTARA
Trigger: GGCCCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CAA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCGTGTTGGGATCTTCCTaGCTCAGTTTTGTTGATCAG +
Preference number: 3 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCVLGSS*LSFVDQ
Trigger: CTGATCAACAAAACTGAGCAAGGAAGATCCCAACAC...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR CCA 72 bp GGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTaGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: GRGSAGSLDEVT*KRPTSCGFPSS
Trigger: TGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR GCA 72 bp GTTTGGCTCTTCACTATAATGGAGCTGCACTCTCCATaGCCCCCTGGCCTTCTACCCCTTCAGTGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: VWLFTIMELHSP*PPGLLPLQCWD
Trigger: ATCCCAACACTGAAGGGGTAGAAGGCCAGGGGGGCATGGAGAGTGCAGCTCCATTATAGTGAAGAGCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR GCA 72 bp CACTGCTTTCTGACTCCTCGCTGCTCAAACACAGGCTaGTGTAGGAGTAGTTCATCCACACTGGGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: HCFLTPRCSNTG*CRSSSSTLGWD
Trigger: ATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAGCGAGGAGTCAGAAAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CCA 72 bp AAGAGTGACCTGAGAACAAGTGGGAGAGAACGTAGGTaGAGAAGTCGTGGGGAGAGAACTCCAGGGACACTG +
Preference number: 3 (lower is better)
Translates to: KSDLRTSGRERR*RSRGERTPGTL
Trigger: CAGTGTCCCTGGAGTTCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCCACTTGTTCTCAGGTCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR TCA 72 bp AGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTaGCTCTTGGCAGGGGAGGTGCTAGAGATGAAGATG +
Preference number: 3 (lower is better)
Translates to: RSIQAWVGLLSG*LLAGEVLEMKM
Trigger: CATCTTCATCTCTAGCACCTCCCCTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR CCA 72 bp GGGCCAGTGTCTCTCTTCAACAGGGTCTCCACTCGCTaGATAATCTCCCGAATCCGTCTGAGAAATCCATCT +
Preference number: 3 (lower is better)
Translates to: GPVSLFNRVSTR*IISRIRLRNPS
Trigger: AGATGGATTTCTCAGACGGATTCGGGAGATTATCCAGCGAGTGGAGACCCTGTTGAAGAGAGACACTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CAA 90 bp TGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGATGGGCGCCAGCCTGCCTTGCTCAGTTTTGTaGATCAGAAAGCATCAGATT +
Preference number: 3 (lower is better)
Translates to: WKRPTSCGFPSSEMGASLPCSVL*IRKHQI
Trigger: AATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG...CAGGCTGGCGCCCATCTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CAA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTCCTTGCTCAGTTTTGTaGATCAGAAAGCATCAGATT +
Preference number: 3 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSPCSVL*IRKHQI
Trigger: AATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR-3UTR CAA 90 bp ACTGAGAGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGAAGTGGAGCTTCCTTGCTCAGTTTaGTTGATCAGAAAGCATCAG +
Preference number: 3 (lower is better)
Translates to: TERVGPETRVCWRRMEVELPCSV*LIRKHQ
Trigger: CTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG...CTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR TCA 72 bp GCACTGTCCTCTGTATCTGAGCTCTCTGAAGTGAGCTaGGGGGTTGAAGGTTTTGGAGAACCAGAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: ALSSVSELSEVS*GVEGFGEPERV
Trigger: CACTCTCTCTGGTTCTCCAAAACCTTCAACCCCTCAGCTCACTTCAGAGAGCTCAGATACAGAGGACAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR-3UTR CAA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACACAGTTCACATATGTTaGGCTCTTCACTATAATGGA +
Preference number: 3 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDTVHIC*ALHYNG
Trigger: TCCATTATAGTGAAGAGCCAAACATATGTGAACTGT...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR-3UTR CAA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAAGAGAGTGGGGGATGTaGGCTGCAAGGGAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPREWGM*AAREEA
Trigger: AGCCTCTTCCCTTGCAGCCAACATCCCCCACTCTCT...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR TCA 72 bp TTTCCAGCATTTTTATTGGTTGCTGCTAATGTGGTGTaGGCATATCCCCTACACTCTCCCAGCTGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: FPAFLLVAANVV*AYPLHSPSWEW
Trigger: CCACTCCCAGCTGGGAGAGTGTAGGGGATATGCTCACACCACATTAGCAGCAACCAATAAAAATGCTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR CCA 72 bp TCTTGTTTCCAGCATTTTTATTGGTTGCTGCTAATGTaGTGTGAGCATATCCCCTACACTCTCCCAGCTGGG +
Preference number: 3 (lower is better)
Translates to: SCFQHFYWLLLM*CEHIPYTLPAG
Trigger: CCCAGCTGGGAGAGTGTAGGGGATATGCTCACACCACATTAGCAGCAACCAATAAAAATGCTGGAAACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCTGTCACCCCCTTGCTTaGCCGCTGCTCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DPQLHGRSQPELPWSLARCHPLA*PLLLGA
Trigger: GGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACA...GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
3UTR CAA 72 bp CACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTaGCTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HILPTSPANVTP*LARCSWEPVLL
Trigger: CAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp GAGACACTAGTGACCCGCAGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTCCTCAGTCTGGGACATaGGGACGGTGGTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ETLVTRSRDRGLRRRFLPPQSGT*GRWSPW
Trigger: CCACGGAGACCACCGTCCTCATGTCCCAGACTGAGG...AGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCTGCGGGTCACTAGTGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCGCCGGGATCGGGGTCTaGGCCGGAGATTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCAGIGV*AGDSSL
Trigger: CAGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGC...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp TCCTCCTGGGGGCTTAGGGTGTCTTCAGCAGCCTCCATGGGGCCAGTGTCTCTCGGGAGGTGGGGAAGCTaGCCTTGGAGAGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSWGLRVSSAASMGPVSLGRWGS*PWRGGA
Trigger: AGCGCCGCCTCTCCAAGGGCAGCTTCCCCACCTCCC...GAGAGACACTGGCCCCATGGAGGCTGCTGAAGACACCCTAAGCCCCCAGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp TCCTCCTGGGGGCTTAGGGTGTCTTCAGCAGCCTCCATGGGGCCAGTGTCTCTCGGCCACAATACCCGGTaGGGGCTGCTTCCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSWGLRVSSAASMGPVSLGHNTR*GLLPQP
Trigger: CGGCTGGGGAAGCAGCCCCCACCGGGTATTGTGGCC...GAGAGACACTGGCCCCATGGAGGCTGCTGAAGACACCCTAAGCCCCCAGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp CCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTGCTCCTGGGAGCCGACACAAGCTCCATGGTaGGCCCTGGTGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTSPANVTPLLARCSWEPTQAPW*ALVWGR
Trigger: TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGT...CGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCAGAACACAAGCTCCATaGTGGGCCCTGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: DPQLHGRSQPELPWSLARRTQAP*WALVWG
Trigger: CCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCT...GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGGACCCCGGGCCCACTaGAGAGTCCGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGGPRAH*RVRELG
Trigger: CCCGAGCTCCCGGACTCTGCAGTGGGCCCGGGGTCC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp AGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCCTCATTTGTGGCCATGGGCACAGTTaGTGGTGGAGGTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SRDRGLRRRFLPGGLLICGHGHS*WWRSWL
Trigger: GAGCCAGGACCTCCACCAGCAACTGTGCCCATGGCC...ACAAATGAGGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCCCGGAGATTCCTCCCTaGGGGTCTCCTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: DPQLHGRSQPELPWSLARPEIPP*GSPHLS
Trigger: GGACAAATGAGGAGACCCCCAGGGAGGAATCTCCGG...GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp CTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCTTCCCTCTTCAGAGATaGGCGCCAGCCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LARCSWEPVLLPLREFLRFPLQR*APAWLP
Trigger: GGGAAGCCAGGCTGGCGCCCATCTCTGAAGAGGGAA...GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp GAGACACTAGTGACCCGCAGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTATTCCGGGGTCCCGATaGCACTCTTGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETLVTRSRDRGLRRRFLPIPGSR*HSWQRR
Trigger: CCTCCTTTGCCAAGAGTGTCATCGGGACCCCGGAAT...AGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCTGCGGGTCACTAGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTTGCGCAGCCAGAGCTTaGGGCCCGGCTTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSCAARA*GPASRR
Trigger: ACGGCGAGAAGCCGGGCCTCAAGCTCTGGCTGCGCA...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GAGACACTAGTGACCCGCAGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTAGGTCCTGGCTCTGGTaGGAGTGCCTCCAATTCCCT +
Preference number: 4 (lower is better)
Translates to: ETLVTRSRDRGLRRRFLPRSWLW*ECLQFP
Trigger: AGGGAATTGGAGGCACTCCCACCAGAGCCAGGACCT...AGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCTGCGGGTCACTAGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGTCTCGATGTCAAACTTaGGGTATCGGCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: TPAPRPSAARSLSARASLSRCQT*GIGHRG
Trigger: CCCCCGATGGCCGATACCTCAAGTTTGACATCGAGA...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp GCAGCTGCAATCTCTTCCGGGCTGTCCCCATCCAGATCAAATCGGAAGGTCACCCAAAGGAGGCGCGCTTaGGCGTGGCCAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AAAISSGLSPSRSNRKVTQRRRA*AWPGPG
Trigger: ACCTGGGCCTGGCCACGCTCAAGCGCGCCTCCTTTG...GGTGACCTTCCGATTTGATCTGGATGGGGACAGCCCGGAAGAGATTGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACCCCTTGCTTGCCCGCTaGTCCTGGGAGCCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDPLLAR*SWEPVL
Trigger: CAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGG...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp CTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCATTTGCGCGGCATTCTaGCACTCGGAGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: LARCSWEPVLLPLREFLRICAAF*HSEYGY
Trigger: GTACCCGTACTCCGAGTGCCAGAATGCCGCGCAAAT...GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGCGTCCCGGCCCAGCTaGAACAGGAACTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSASRPS*NRNSMA
Trigger: GGCCATCGAGTTCCTGTTCCAGCTGGGCCGGGACGC...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATGCGCAGCCAGAGCTTaGGGCCCGGCTTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRCAARA*GPASRR
Trigger: ACGGCGAGAAGCCGGGCCTCAAGCTCTGGCTGCGCA...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACAGCCACCATCTCCTGTaGCACCTCCTCGGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDSHHLL*HLLGRV
Trigger: GACGCGGCCGAGGAGGTGGCACAGGAGATGGTGGCT...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCATACCCGGTGGGGGCTaGTTCCCCAGCCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGIPGGG*FPSRLY
Trigger: GTACAGCCGGCTGGGGAAGCAGCCCCCACCGGGTAT...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GCAGCTGCAATCTCTTCCGGGCTGTCCCCATCCAGATCAAATCGGAAGGTCACCATACCCGGTGGGGGCTaGTTCCCCAGCCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AAAISSGLSPSRSNRKVTIPGGG*FPSRLY
Trigger: GTACAGCCGGCTGGGGAAGCAGCCCCCACCGGGTAT...GGTGACCTTCCGATTTGATCTGGATGGGGACAGCCCGGAAGAGATTGCAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GTTTCCACCTCTGACAAGTGCTTCTGCCGAAGACTCTGCAGCTCAGCCCAGAACCCCTTGCTTGCCCGCTaGTCCTGGGAGCCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSTSDKCFCRRLCSSAQNPLLAR*SWEPVL
Trigger: CAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGG...GTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTGTCACCCCCTTGCTTaGCCGCTGCTCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDCHPLA*PLLLGA
Trigger: GGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACA...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GGGAGAGAACGTAGGTGGAGAAGTCGTGGGGAGAGAACTCCAGGGACACTGAGAGCGTCCCGGCCCAGCTaGAACAGGAACTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: GRERRWRSRGERTPGTLRASRPS*NRNSMA
Trigger: GGCCATCGAGTTCCTGTTCCAGCTGGGCCGGGACGC...TCTCAGTGTCCCTGGAGTTCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTTCCACCTCTGACAAGTGCTTCTGCCGAAGACTCTGCAGCTCAGCCCAGAACGGGGACCGGGGGCCATaGGCACAGTTGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSTSDKCFCRRLCSSAQNGDRGP*AQLLVE
Trigger: CTCCACCAGCAACTGTGCCCATGGCCCCCGGTCCCC...GTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGAGGGTCTCCACTCGCTaGATAATCTCCCGAATCCGT +
Preference number: 4 (lower is better)
Translates to: TPAPRPSAARSLSARASLRVSTR*IISRIR
Trigger: ACGGATTCGGGAGATTATCCAGCGAGTGGAGACCCT...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCGAGAGTGGGGGATGTTaGCTGCAAGGGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCESGGC*LQGKRL
Trigger: GAGCCTCTTCCCTTGCAGCCAACATCCCCCACTCTC...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCCAGCCCCAAGTCGACTaGGCTACGGCGGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFQPQVD*ATAAET
Trigger: CGTCTCAGCCGCCGTAGCTCAGTCGACTTGGGGCTG...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp GCAGCTGCAATCTCTTCCGGGCTGTCCCCATCCAGATCAAATCGGAAGGTCACCCTCAGCTGTGTGGGGTaGAGGGCTTTCCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: AAAISSGLSPSRSNRKVTLSCVG*RAFLAT
Trigger: GGTGGCCAGGAAAGCCCTTCACCCCACACAGCTGAG...GGTGACCTTCCGATTTGATCTGGATGGGGACAGCCCGGAAGAGATTGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGGACCCCGGGCCCACTaGAGAGTCCGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGGPRAH*RVRELG
Trigger: CCCGAGCTCCCGGACTCTGCAGTGGGCCCGGGGTCC...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTCCTCTGAGAAGCGCTaGCGCTCAGCTCTAGACAGT +
Preference number: 4 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCSSEKR*RSALDS
Trigger: ACTGTCTAGAGCTGAGCGGCAGCGCTTCTCAGAGGA...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp TCCTCCTGGGGGCTTAGGGTGTCTTCAGCAGCCTCCATGGGGCCAGTGTCTCTCTCCTCTGAGAAGCGCTaGCGCTCAGCTCTAGACAGT +
Preference number: 4 (lower is better)
Translates to: SSWGLRVSSAASMGPVSLSSEKR*RSALDS
Trigger: ACTGTCTAGAGCTGAGCGGCAGCGCTTCTCAGAGGA...GAGAGACACTGGCCCCATGGAGGCTGCTGAAGACACCCTAAGCCCCCAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACCGAATGTCACCCCCTTaGTTGCCCGCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDRMSPP*LPAAPG
Trigger: CCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCG...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTAGGTCGGCCTCAGTCTaGGACATGAGGACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSRSASV*DMRTVV
Trigger: GACCACCGTCCTCATGTCCCAGACTGAGGCCGACCT...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp CGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCACGTACTGCACGGAGCACGATGCAAACCTaGCCCCTCAGCACCGACTTC +
Preference number: 4 (lower is better)
Translates to: RSFSRFRWMAATRSRTARSTMQT*PLSTDF
Trigger: GAAGTCGGTGCTGAGGGGCCAGGTTTGCATCGTGCT...CCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGACACTAGTGACCCGCAGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTGGTTCCAGGGGAAAATaGGTTTCCAGGAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: ETLVTRSRDRGLRRRFLPGSRGK*VSRRQR
Trigger: CCTTTGTCTCCTGGAAACCCATTTTCCCCTGGAACC...AGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCTGCGGGTCACTAGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp AGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCCTCATTTGTGAAACTCGGGTGTGCTaGAGGAGAATGGAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRDRGLRRRFLPGGLLICETRVC*RRMEVE
Trigger: CTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTC...ACAAATGAGGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp AGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGAAGTGGAGAGCTGGGGGACTAGGAGGGGCTaGAGGAGACTGGGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RVGPETRVCWRRMEVESWGTRRG*RRLGKE
Trigger: CTCCTTTCCCAGTCTCCTCCAGCCCCTCCTAGTCCC...CCAGCTCTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGCTCAGCCGGTTCCTTaGATGAAGTCACTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TPAPRPSAARSLSARASLAQPVP*MKSLGN
Trigger: GTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGC...CAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGGGCTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACAGCTTCCCTGGTCTCTaGCCCGCCTCCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDSFPGL*PASSTV
Trigger: GACAGTGCTGGAGGCGGGCCAGAGACCAGGGAAGCT...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp CTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCGCTCCGAAGGCAGAATaGACTCGTTATATACCATGG +
Preference number: 4 (lower is better)
Translates to: LARCSWEPVLLPLREFLRAPKAE*TRYIPW
Trigger: CCATGGTATATAACGAGTTCATTCTGCCTTCGGAGC...GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGAGCCACCATCTCCTGTaGCACCTCCTCGGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQSHHLL*HLLGRV
Trigger: GACGCGGCCGAGGAGGTGGCACAGGAGATGGTGGCT...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp AGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGAAGTGGAGAGCTGGAACCCGTTCACGTACTaGACGGGCCACTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RVGPETRVCWRRMEVESWNPFTY*TGHWLV
Trigger: TACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTT...CCAGCTCTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGGCCGGGATCGGGGTCTaGGCCGGAGATTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEAGIGV*AGDSSL
Trigger: CAGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGC...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GCAGCTGCAATCTCTTCCGGGCTGTCCCCATCCAGATCAAATCGGAAGGTCACCGTGGGGGATGTTGGCTaGAAGGGAAGAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AAAISSGLSPSRSNRKVTVGDVG*KGRGSA
Trigger: GGCTGAGCCTCTTCCCTTGCAGCCAACATCCCCCAC...GGTGACCTTCCGATTTGATCTGGATGGGGACAGCCCGGAAGAGATTGCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCCCCAGACCCTCAGCTaGACGGTCGCTCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQPQTLS*TVALSQ
Trigger: CTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGG...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGTTTGGAGCTAGGCGGTaGGCTCCTCGCGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEFGARR*APRGAR
Trigger: CCTGGCCCCGCGAGGAGCCCACCGCCTAGCTCCAAA...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTCCCTTAGCGGCTCCCTaGACCCCGGGCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGPLAAP*TPGPLQ
Trigger: CTGCAGTGGGCCCGGGGTCCAGGGAGCCGCTAAGGG...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGATCCCGGTGCAGGATaGGAGGAACCCGGGAGTGTA +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGDPGAG*EEPGSV
Trigger: TACACTCCCGGGTTCCTCCCATCCTGCACCGGGATC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCTTCATTGGATGGGTCTaGGAGGGGGACGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFFIGWV*EGDGQG
Trigger: GCCCTGCCCGTCCCCCTCCCAGACCCATCCAATGAA...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GCAGCTGCAATCTCTTCCGGGCTGTCCCCATCCAGATCAAATCGGAAGGTCACCGGGGAAGATGGGACCTaGGGAAATGGGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AAAISSGLSPSRSNRKVTGEDGT*GNGGSR
Trigger: CCTGGAACCCCCATTTCCCCAGGTCCCATCTTCCCC...GGTGACCTTCCGATTTGATCTGGATGGGGACAGCCCGGAAGAGATTGCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCTTCCCTCTTCAGAGATaGGCGCCAGCCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGFPLQR*APAWLP
Trigger: GGGAAGCCAGGCTGGCGCCCATCTCTGAAGAGGGAA...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCTCATCCACACTGGGCTaGGATGGCTCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGSSTLG*DGSGVG
Trigger: CCCAACCCCTGAGCCATCCCAGCCCAGTGTGGATGA...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTTGGGGAAGCTGCCCTTaGAGAGGCGGCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGWGSCP*RGGAGG
Trigger: GCCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCCCCA...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTCTGAGCTACGGCGGCTaGGACGAGAAGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGLSYGG*DEKSAA
Trigger: GGCCGCGCTCTTCTCGTCTCAGCCGCCGTAGCTCAG...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTTGGCGGCTCCAGCGCTaGAGGACCCGCGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGWRLQR*RTRGFI
Trigger: GATGAAGCCGCGGGTCCTTCAGCGCTGGAGCCGCCA...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGACACTTGAGATCCCGGTaGAGGATGGGAGGAACCCGG +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRHLRSR*RMGGTR
Trigger: CCGGGTTCCTCCCATCCTGCACCGGGATCTCAAGTG...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTCTTGGCAGGGCCATGGGCACAGTTaGTGGTGGAGGTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLEASRLGWDCLVVDSWQGHGHS*WWRSWL
Trigger: GAGCCAGGACCTCCACCAGCAACTGTGCCCATGGCC...CTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp AGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGAAGTGGAGAGCTGGTGTGCTCCAGGGAGGTaGTGCTCTGGAGCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RVGPETRVCWRRMEVESWCAPGR*CSGALH
Trigger: ATGAAGAGCTCCAGAGCAGCACCTCCCTGGAGCACA...CCAGCTCTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp CCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTCTTGGCAGCCTGGGAGCCGGTGCTaGTGCCACTCAGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PLEASRLGWDCLVVDSWQPGSRC*CHSESS
Trigger: GGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGG...CTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp CCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTCTTGGCAGGAGCTGCACTCTCCATaGCCCCCTGGCCTTCTACCC +
Preference number: 4 (lower is better)
Translates to: PLEASRLGWDCLVVDSWQELHSP*PPGLLP
Trigger: GGGTAGAAGGCCAGGGGGGCATGGAGAGTGCAGCTC...CTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTTACTGCACGGGCCACTaGCTGGTAATCGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSYCTGH*LVIGFT
Trigger: TGTGAAGCCGATTACCAGCCAGTGGCCCGTGCAGTA...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTTCTGGAGCTCTTCATTaGATGGGTCTGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSSGALH*MGLGGG
Trigger: TCCCCCTCCCAGACCCATCCAATGAAGAGCTCCAGA...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTCAGCCCCAAGTCGACTaGGCTACGGCGGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGQPQVD*ATAAET
Trigger: CGTCTCAGCCGCCGTAGCTCAGTCGACTTGGGGCTG...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGCATCTCCACCTCCTCTaGGAAGCGCTGCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEHLHLL*EALPLS
Trigger: GCTGAGCGGCAGCGCTTCTCAGAGGAGGTGGAGATG...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACCCGGAAACTCGGGTGTaGTGGAGGAGAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDPETRV*WRRMEV
Trigger: CACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGG...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTGCTCAAACACAGGCTaGTGTAGGAGTAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCCSNTG*CRSSSS
Trigger: GGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCA...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GGGAGAGAACGTAGGTGGAGAAGTCGTGGGGAGAGAACTCCAGGGACACTGAGAGACGTTGCCACAGCCTaGGTCTCCATGTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GRERRWRSRGERTPGTLRDVATA*VSMSSF
Trigger: AAAGGAGGACATGGAGACCCAGGCTGTGGCAACGTC...TCTCAGTGTCCCTGGAGTTCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GTGTCTCTCTTCAACAGGGTCTCCACTCGCTGGATAATCTCCCGAATCCGTCTGGATCCCGGTGCAGGATaGGAGGAACCCGGGAGTGTA +
Preference number: 4 (lower is better)
Translates to: VSLFNRVSTRWIISRIRLDPGAG*EEPGSV
Trigger: TACACTCCCGGGTTCCTCCCATCCTGCACCGGGATC...CAGACGGATTCGGGAGATTATCCAGCGAGTGGAGACCCTGTTGAAGAGAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTAGGAACTCGATGGCCTaGTTGTCCCGTGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGRNSMA*LSRGRP
Trigger: GGGGCGCCCACGGGACAACCAGGCCATCGAGTTCCT...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACCACGCTTTCGCTGGATaGCAGCAACCCGTTCACGTA +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDHAFAG*QQPVHV
Trigger: TACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTG...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGAGGAAGGGCTGGTGCTaGTCTGCCTCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQRKGWC*SASGSS
Trigger: TGAGGAGCCAGAGGCAGACCAGCACCAGCCCTTCCT...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTGTCTCTCTTCAACAGGGTCTCCACTCGCTGGATAATCTCCCGAATCCGTCTGAGGAAGGGCTGGTGCTaGTCTGCCTCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSLFNRVSTRWIISRIRLRKGWC*SASGSS
Trigger: TGAGGAGCCAGAGGCAGACCAGCACCAGCCCTTCCT...CAGACGGATTCGGGAGATTATCCAGCGAGTGGAGACCCTGTTGAAGAGAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGACCGGAGATTCCTCCCTaGGGGTCTCCTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRPEIPP*GSPHLS
Trigger: GGACAAATGAGGAGACCCCCAGGGAGGAATCTCCGG...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGGGTGCTGGCTCCTCCTaGGGGCTTAGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQGAGSS*GLRVSS
Trigger: TGAAGACACCCTAAGCCCCCAGGAGGAGCCAGCACC...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGAAACTCGGGTGTGCTaGAGGAGAATGGAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSETRVC*RRMEVE
Trigger: CTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTC...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GTTTCCACCTCTGACAAGTGCTTCTGCCGAAGACTCTGCAGCTCAGCCCAGAACGGGACACTGAGAGAGTaGGACCGGAAACTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: VSTSDKCFCRRLCSSAQNGTLRE*DRKLGC
Trigger: ACACCCGAGTTTCCGGTCCCACTCTCTCAGTGTCCC...GTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGGGAGAGAACGTAGGTaGAGAAGTCGTGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGGRERR*RSRGER
Trigger: TCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTCAGCCAGAGCTTCCCTaGTCTCTGGCCCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGQPELP*SLARLQ
Trigger: CTGGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTG...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTTCCACCTCTGACAAGTGCTTCTGCCGAAGACTCTGCAGCTCAGCCCAGAACGGGCTGCCCCCAACTTaGGGTTCCTTCCCATCATCT +
Preference number: 4 (lower is better)
Translates to: VSTSDKCFCRRLCSSAQNGLPPT*GSFPSS
Trigger: AGATGATGGGAAGGAACCCCAAGTTGGGGGCAGCCC...GTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCGTAGTTCATCCACACTaGGCTGGGATGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFVVHPH*AGMAQG
Trigger: CCCCTGAGCCATCCCAGCCCAGTGTGGATGAACTAC...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGACTACACTCTCCCAGCTaGGAGTGGGCCCCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRLHSPS*EWAPLE
Trigger: TTCTAGAGGGGCCCACTCCCAGCTGGGAGAGTGTAG...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCTGGGCCAGGAGGTCCTaGATGGTGAACCGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFWARRS*MVNRSD
Trigger: GTCACTTCGGTTCACCATCCAGGACCTCCTGGCCCA...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTTGGCGGCTCCAGCGCTaGAGGACCCGCGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPWRLQR*RTRGFI
Trigger: GATGAAGCCGCGGGTCCTTCAGCGCTGGAGCCGCCA...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGGATGCAGCCTTCAATaGTCTCCTTCACCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGGCSLQ*SPSPRV
Trigger: TACCCGAGGTGAAGGAGATCATTGAAGGCTGCATCC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp CGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCACGTACTGCACGGGAACTAAGAGTGACCTaGGAACAAGTGGGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RSFSRFRWMAATRSRTARELRVT*EQVGEN
Trigger: GTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTC...CCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp AAATCCATCTCGCTCCGAAGGCAGAATGAACTCGTTATATACCATGGCAGCTGCCCGAGCAGGAGGTGGTaGGGCCTCACTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: KSISLRRQNELVIYHGSCPSRRW*GLTLHL
Trigger: GAGGTGGAGAGTGAGGCCTCACCACCTCCTGCTCGG...GCAGCTGCCATGGTATATAACGAGTTCATTCTGCCTTCGGAGCGAGATGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGAAGCCGGTTCCTTGGATaGAGTCACTTGGAAACGCCC +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRSRFLG*SHLETP
Trigger: GGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCT...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCTTCCCCACTGCTTTCTaGCTCCTCGCTGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGFPTAF*LLAAQT
Trigger: TGTTTGAGCAGCGAGGAGTCAGAAAGCAGTGGGGAA...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAGCCATCGGGGGACGTTaGCACAGCCTGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQAIGGR*HSLGLH
Trigger: ATGGAGACCCAGGCTGTGGCAACGTCCCCCGATGGC...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAACCTGGGAGCCGGTGCTaGTGCCACTCAGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQPGSRC*CHSESS
Trigger: GGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGG...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GAAAGGGGAACTAAGAGTGACCTGAGAACAAGTGGGAGAGAACGTAGGTGGAGAGAGCTGCACTCTCCATaGCCCCCTGGCCTTCTACCC +
Preference number: 4 (lower is better)
Translates to: ERGTKSDLRTSGRERRWRELHSP*PPGLLP
Trigger: GGGTAGAAGGCCAGGGGGGCATGGAGAGTGCAGCTC...TCTCCACCTACGTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTCCCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTGGGGACCGGGGGCCATaGGCACAGTTGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLAGDRGP*AQLLVE
Trigger: CTCCACCAGCAACTGTGCCCATGGCCCCCGGTCCCC...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGGTAGTTCATCCACACTaGGCTGGGATGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQVVHPH*AGMAQG
Trigger: CCCCTGAGCCATCCCAGCCCAGTGTGGATGAACTAC...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTGGGGAAGCTGCCCTTaGAGAGGCGGCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHWGSCP*RGGAGG
Trigger: GCCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCCCCA...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGTGGTGGGCCCTGGTGTaGGGGAGATACATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQWWALV*GRYMAS
Trigger: AGAAGCCATGTATCTCCCCCACACCAGGGCCCACCA...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTAGAAGCATCCAGGCTTaGGTGGGATTGCTTAGTGGT +
Preference number: 4 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSRSIQA*VGLLSG
Trigger: ACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCT...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACCAAAGGAGGCGCGCTTaGGCGTGGCCAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHQRRRA*AWPGPG
Trigger: ACCTGGGCCTGGCCACGCTCAAGCGCGCCTCCTTTG...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGTGTGGAGAGGGATTTaGGGAGACCTGGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGVWRGI*GDLGRN
Trigger: ATTTCTTCCCAGGTCTCCTCAAATCCCTCTCCACAC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp CCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTCTTGGCAGGGATTGCTTAGTGGTTaGCTCTTGGCAGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLEASRLGWDCLVVDSWQGLLSG*LLAGEV
Trigger: CACCTCCCCTGCCAAGAGTCAACCACTAAGCAATCC...CTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTCTCCGTGGCCGGGGATaGCAACATGAGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGLRGRG*QHEEEQ
Trigger: CTGCTCTTCCTCATGTTGGCATCCCCGGCCACGGAG...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTGGGCTGGTGCTGGTCTaGCTCTGGCTCCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLAGLVLV*LWLLRL
Trigger: GAGCCTGAGGAGCCAGAGGCAGACCAGCACCAGCCC...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAGTGGGGGATGTTGGCTaGAAGGGAAGAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQVGDVG*KGRGSA
Trigger: GGCTGAGCCTCTTCCCTTGCAGCCAACATCCCCCAC...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCTCTGACAAGTGCTTCTaGCGAAGACTCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGSDKCF*RRLCSS
Trigger: TGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGA...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCTCCACCTCTGACAAGTaGTTCTGCCGAAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFSTSDK*FCRRLC
Trigger: GCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGA...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GAAAGGGGAACTAAGAGTGACCTGAGAACAAGTGGGAGAGAACGTAGGTGGAGAGGAACAGGAACTCGATaGCCTGGTTGTCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: ERGTKSDLRTSGRERRWRGTGTR*PGCPVG
Trigger: GCCCACGGGACAACCAGGCCATCGAGTTCCTGTTCC...TCTCCACCTACGTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTCCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCACGCTTTCGCTGGATaGCAGCAACCCGTTCACGTA +
Preference number: 4 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQHAFAG*QQPVHV
Trigger: TACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTG...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTTCCACCTCTGACAAGTGCTTCTGCCGAAGACTCTGCAGCTCAGCCCAGAACTTCTCACGCTTTCGCTaGATGGCAGCAACCCGTTCA +
Preference number: 4 (lower is better)
Translates to: VSTSDKCFCRRLCSSAQNFSRFR*MAATRS
Trigger: TGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAA...GTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGTGGAGGTCCTGGCTCTaGTGGGAGTGCCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEWRSWL*WECLQF
Trigger: GAATTGGAGGCACTCCCACCAGAGCCAGGACCTCCA...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp AAATCCATCTCGCTCCGAAGGCAGAATGAACTCGTTATATACCATGGCAGCTGCTGCTGGTGGAGGTCCTaGCTCTGGTGGGAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: KSISLRRQNELVIYHGSCCWWRS*LWWECL
Trigger: GAGGCACTCCCACCAGAGCCAGGACCTCCACCAGCA...GCAGCTGCCATGGTATATAACGAGTTCATTCTGCCTTCGGAGCGAGATGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp CCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTCTTGGCAGGGCCAGAACGTGGAATaGATAGGGCAAAAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PLEASRLGWDCLVVDSWQGQNVE*IGQKPR
Trigger: CCTCGGCTTTTGCCCTATCCATTCCACGTTCTGGCC...CTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAGGTGCTGGCTCCTCCTaGGGGCTTAGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQGAGSS*GLRVSS
Trigger: TGAAGACACCCTAAGCCCCCAGGAGGAGCCAGCACC...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACGGTTCCAGGGGAAAATaGGTTTCCAGGAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDGSRGK*VSRRQR
Trigger: CCTTTGTCTCCTGGAAACCCATTTTCCCCTGGAACC...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGGGACTAGGAGGGGCTaGAGGAGACTGGGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGGTRRG*RRLGKE
Trigger: CTCCTTTCCCAGTCTCCTCCAGCCCCTCCTAGTCCC...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACGCTCAGCCGGTTCCTTaGATGAAGTCACTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDAQPVP*MKSLGN
Trigger: GTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGC...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCAGCCAGAGCTTCCCTaGTCTCTGGCCCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLAQPELP*SLARLQ
Trigger: CTGGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTG...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGGACAGCATAGCAGCTaGGGCCACAATACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGGQHSS*GHNTRW
Trigger: CCACCGGGTATTGTGGCCCCAGCTGCTATGCTGTCC...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGAGCATCCAGGCTTGGGTaGGATTGCTTAGTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRASRLG*DCLVVD
Trigger: GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGC...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACCCGGGGATGCCAACATaGGGAAGAGCAGGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHPGMPT*GRAGRR
Trigger: TCGGCGCCCTGCTCTTCCTCATGTTGGCATCCCCGG...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAGAACTCCAGGGACACTaGGAGAGTGGGACCGGAAAC +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQELQGH*ESGTGN
Trigger: GTTTCCGGTCCCACTCTCTCAGTGTCCCTGGAGTTC...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp CCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTCTTGGCAGAGTCATCACAGCCAGTaGGAAGGCACTAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLEASRLGWDCLVVDSWQSHHSQ*EGTSQR
Trigger: TCTCTGGCTAGTGCCTTCTCACTGGCTGTGATGACT...CTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTCAGCTGTGTGGGGTaGAGGGCTTTCCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLALSCVG*RAFLAT
Trigger: GGTGGCCAGGAAAGCCCTTCACCCCACACAGCTGAG...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGACTCTCTGAAGTGAGCTaGGGGGTTGAAGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRLSEVS*GVEGFG
Trigger: TCCAAAACCTTCAACCCCTCAGCTCACTTCAGAGAG...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGGAAGGTCACCATCTTaGTGTTATGGGTCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGGRSPS*CYGSVA
Trigger: AGCTACAGACCCATAACAGCAAGATGGTGACCTTCC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCATATACCATGGCAGCTaGAATCTCTTCCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFIYHGS*NLFRAV
Trigger: GACAGCCCGGAAGAGATTGCAGCTGCCATGGTATAT...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp TTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGCCGGAAACTCGGGTGTaGTGGAGGAGAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LDEVTWKRPTSCGFPSSEPETRV*WRRMEV
Trigger: CACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGG...CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGCCCCAGACCCTCAGCTaGACGGTCGCTCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLPQTLS*TVALSQ
Trigger: CTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTGGGG...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGGAGGTGGGGAAGCTaGCCTTGGAGAGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVGRWGS*PWRGGA
Trigger: AGCGCCGCCTCTCCAAGGGCAGCTTCCCCACCTCCC...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGGTATCTTCACCTTGTaGAAGCTGTTCGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGGIFTL*KLFGFL
Trigger: CAGAAAGCCGAACAGCTTCCACAAGGTGAAGATACC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACACCACTCTGTCATTCTaGTCTGAGACACTAGTGACC +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDTTLSF*SETLVT
Trigger: GGTCACTAGTGTCTCAGACCAGAATGACAGAGTGGT...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCTTGGATGAAGTCACTTaGAAACGCCCAACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGLDEVT*KRPTSC
Trigger: GCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAA...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGACTGAGCTACGGCGGCTaGGACGAGAAGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGLSYGG*DEKSAA
Trigger: GGCCGCGCTCTTCTCGTCTCAGCCGCCGTAGCTCAG...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAACGGGAGTGTAGGAAATaGAGTCCCCGCAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQRECRK*SPRRIW
Trigger: CCAAATCCTGCGGGGACTTCATTTCCTACACTCCCG...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAATCTCCCGAATCCGTCTaGGAAATCCATCTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQSPESV*EIHLAP
Trigger: CGGAGCGAGATGGATTTCTCAGACGGATTCGGGAGA...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACGAAAGCATCAGATTCTaGGAACACAAGCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDESIRF*EHKLHG
Trigger: ACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTC...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATCCGCTAGTTCCACGTaGACACCGCGCTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPSASST*TPRSSR
Trigger: CCGCGAGGAGCGCGGTGTGCACGTGGAACTAGCGGA...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGTTTGGAGCTAGGCGGTaGGCTCCTCGCGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMFGARR*APRGAR
Trigger: CCTGGCCCCGCGAGGAGCCCACCGCCTAGCTCCAAA...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTGGAACAGGAACTCGATaGCCTGGTTGTCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLAGTGTR*PGCPVG
Trigger: GCCCACGGGACAACCAGGCCATCGAGTTCCTGTTCC...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAATACTGCACGGGCCACTaGCTGGTAATCGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQYCTGH*LVIGFT
Trigger: TGTGAAGCCGATTACCAGCCAGTGGCCCGTGCAGTA...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGTGCTGGTGGAGGTCCTaGCTCTGGTGGGAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLCWWRS*LWWECL
Trigger: GAGGCACTCCCACCAGAGCCAGGACCTCCACCAGCA...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGGCCAGAACGTGGAATaGATAGGGCAAAAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGGQNVE*IGQKPR
Trigger: CCTCGGCTTTTGCCCTATCCATTCCACGTTCTGGCC...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCACCACTCTGTCATTCTaGTCTGAGACACTAGTGACC +
Preference number: 4 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFTTLSF*SETLVT
Trigger: GGTCACTAGTGTCTCAGACCAGAATGACAGAGTGGT...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTAGGGAGGTGCTGCTCTaGAGCTCTTCATTGGATGGG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGREVLL*SSSLDG
Trigger: CCCATCCAATGAAGAGCTCCAGAGCAGCACCTCCCT...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGAGGATTTGAGGAGACCTaGGAAGAAATGGGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KHQILRTQAPWWALVWGRGFEET*EEMGEN
Trigger: ATTCTCCCCCATTTCTTCCCAGGTCTCCTCAAATCC...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAAAGGGGAACTAAGAGTGACCTGAGAACAAGTGGGAGAGAACGTAGGTGGAGATGTGCTGGAGGAGAATaGAAGTGGAGAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERGTKSDLRTSGRERRWRCAGGE*KWRAGG
Trigger: CCCACCAGCTCTCCACTTCCATTCTCCTCCAGCACA...TCTCCACCTACGTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTCCCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAGGGAGAGAACGTAGGTaGAGAAGTCGTGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQGRERR*RSRGER
Trigger: TCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCC...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AAATCCATCTCGCTCCGAAGGCAGAATGAACTCGTTATATACCATGGCAGCTGCTCCACCTCAGCTGTGTaGGGTGAAGGGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KSISLRRQNELVIYHGSCSTSAV*GEGLSW
Trigger: CCAGGAAAGCCCTTCACCCCACACAGCTGAGGTGGA...GCAGCTGCCATGGTATATAACGAGTTCATTCTGCCTTCGGAGCGAGATGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAGGCCACAATACCCGGTaGGGGCTGCTTCCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIGHNTR*GLLPQP
Trigger: CGGCTGGGGAAGCAGCCCCCACCGGGTATTGTGGCC...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTAGAACACAAGCTCCATaGTGGGCCCTGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPRTQAP*WALVWG
Trigger: CCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCT...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTTCTCCCAGCTGGGAGTaGGCCCCTCTAGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPSPSWE*APLEAS
Trigger: GGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCACATCTCCACCTCCTCTaGGAAGCGCTGCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPHLHLL*EALPLS
Trigger: GCTGAGCGGCAGCGCTTCTCAGAGGAGGTGGAGATG...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp AAATCCATCTCGCTCCGAAGGCAGAATGAACTCGTTATATACCATGGCAGCTGCAGACATTGTCGCACTTaGGATCCCGGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: KSISLRRQNELVIYHGSCRHCRT*DPGAGW
Trigger: CCATCCTGCACCGGGATCTCAAGTGCGACAATGTCT...GCAGCTGCCATGGTATATAACGAGTTCATTCTGCCTTCGGAGCGAGATGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGAACTCCAGGGACACTaGGAGAGTGGGACCGGAAAC +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPELQGH*ESGTGN
Trigger: GTTTCCGGTCCCACTCTCTCAGTGTCCCTGGAGTTC...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTAGTCATCACAGCCAGTaGGAAGGCACTAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGSHHSQ*EGTSQR
Trigger: TCTCTGGCTAGTGCCTTCTCACTGGCTGTGATGACT...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGCCGAGCAGGAGGTGGTaGGGCCTCACTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMPSRRW*GLTLHL
Trigger: GAGGTGGAGAGTGAGGCCTCACCACCTCCTGCTCGG...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAATTCCCCACTGCTTTCTaGCTCCTCGCTGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQFPTAF*LLAAQT
Trigger: TGTTTGAGCAGCGAGGAGTCAGAAAGCAGTGGGGAA...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGATGGTGAACCGAAGTaGCCTTGCGGTAGATTTGCG +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGDGEPK*PCGRFA
Trigger: CGCAAATCTACCGCAAGGTCACTTCGGTTCACCATC...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR GCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACCTCCGTGGCCGGGGATaGCAACATGAGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHLRGRG*QHEEEQ
Trigger: CTGCTCTTCCTCATGTTGGCATCCCCGGCCACGGAG...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGTCCTCCTTTTCTTCCTaGTCCCGCCGCCGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLSSFSS*SRRRSR
Trigger: CCTAGAGCGGCGGCGGGAGCAGGAAGAAAAGGAGGA...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGATCCGCTAGTTCCACGTaGACACCGCGCTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGSASST*TPRSSR
Trigger: CCGCGAGGAGCGCGGTGTGCACGTGGAACTAGCGGA...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGGGCTGGTGCTGGTCTaGCTCTGGCTCCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMGLVLV*LWLLRL
Trigger: GAGCCTGAGGAGCCAGAGGCAGACCAGCACCAGCCC...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGCTCCAGGGAGGTGCTaGTCTGGAGCTCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPAPGRC*SGALHW
Trigger: CCAATGAAGAGCTCCAGAGCAGCACCTCCCTGGAGC...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGCTGTCCAGCTCCTGTaGTCCAGGGAGGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVAVQLL*SREVLL
Trigger: GAGCAGCACCTCCCTGGAGCACAGGAGCTGGACAGC...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTTCCACCTCTGACAAGTaGTTCTGCCGAAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGSTSDK*FCRRLC
Trigger: GCAGAGTCTTCGGCAGAAGCACTTGTCAGAGGTGGA...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTTGGGCCAGGAGGTCCTaGATGGTGAACCTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPWARRS*MVNLSF
Trigger: GAACGAGAGGTTCACCATCCAGGACCTCCTGGCCCA...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGTCGCGGAAGAAGGCGTaGGCCAGGAGGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVSRKKA*ARRSWM
Trigger: CATCCAGGACCTCCTGGCCCACGCCTTCTTCCGCGA...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGAGGAACTCGATGGCCTaGTTGTCCCGTGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMRNSMA*LSRGRP
Trigger: GGGGCGCCCACGGGACAACCAGGCCATCGAGTTCCT...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGGCACAGTTGCTGGTaGAGGTCCTGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVGHSCW*RSWLWW
Trigger: CCACCAGAGCCAGGACCTCCACCAGCAACTGTGCCC...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGGCTGCCCCCAACTTaGGGTTCCTTCCCATCATCT +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPGLPPT*GSFPSS
Trigger: AGATGATGGGAAGGAACCCCAAGTTGGGGGCAGCCC...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGCTCCATGGTGGGCCCTaGTGTGGGGGAGATACATGG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLLHGGP*CGGDTW
Trigger: CCATGTATCTCCCCCACACCAGGGCCCACCATGGAG...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATACCTCAGTCTGGGACATaGGGACGGTGGTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIPQSGT*GRWSPW
Trigger: CCACGGAGACCACCGTCCTCATGTCCCAGACTGAGG...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTGCCATCGGGGGACGTTaGCACAGCCTGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQAAIGGR*HSLGLH
Trigger: ATGGAGACCCAGGCTGTGGCAACGTCCCCCGATGGC...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGAACCCGTTCACGTACTaGACGGGCCACTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLNPFTY*TGHWLV
Trigger: TACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTT...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTTGTGCTCCAGGGAGGTaGTGCTCTGGAGCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLACAPGR*CSGALH
Trigger: ATGAAGAGCTCCAGAGCAGCACCTCCCTGGAGCACA...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTGCTGTCCAGCTCCTGTaGTCCAGGGAGGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQAAVQLL*SREVLL
Trigger: GAGCAGCACCTCCCTGGAGCACAGGAGCTGGACAGC...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAATCTGACAAGTGCTTCTaGCGAAGACTCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQSDKCF*RRLCSS
Trigger: TGAGCTGCAGAGTCTTCGGCAGAAGCACTTGTCAGA...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCGAATGTCACCCCCTTaGTTGCCCGCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQARMSPP*LPAAPG
Trigger: CCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCG...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGAGGTCGGCCTCAGTCTaGGACATGAGGACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVRSASV*DMRTVV
Trigger: GACCACCGTCCTCATGTCCCAGACTGAGGCCGACCT...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTTCGCGGAAGAAGGCGTaGGCCAGGAGGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQASRKKA*ARRSWM
Trigger: CATCCAGGACCTCCTGGCCCACGCCTTCTTCCGCGA...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAGGGCACAGTTGCTGGTaGAGGTCCTGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIGHSCW*RSWLWW
Trigger: CCACCAGAGCCAGGACCTCCACCAGCAACTGTGCCC...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATATTCATTGGATGGGTCTaGGAGGGGGACGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIFIGWV*EGDGQG
Trigger: GCCCTGCCCGTCCCCCTCCCAGACCCATCCAATGAA...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGGGACACTGAGAGAGTaGGACCGGAAACTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLGTLRE*DRKLGC
Trigger: ACACCCGAGTTTCCGGTCCCACTCTCTCAGTGTCCC...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGTCCACCTCAGCTGTGTaGGGTGAAGGGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLSTSAV*GEGLSW
Trigger: CCAGGAAAGCCCTTCACCCCACACAGCTGAGGTGGA...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAAGCTTCCCTGGTCTCTaGCCCGCCTCCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTISFPGL*PASSTV
Trigger: GACAGTGCTGGAGGCGGGCCAGAGACCAGGGAAGCT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTTTGGAGAGGCGGCGCTaGCGGCTGGACAGCATAGCA +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQALERRR*RLDSIA
Trigger: TGCTATGCTGTCCAGCCGCCAGCGCCGCCTCTCCAA...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGATTGGAGAGGCGGCGCTaGCGGCTGGACAGCATAGCA +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGLERRR*RLDSIA
Trigger: TGCTATGCTGTCCAGCCGCCAGCGCCGCCTCTCCAA...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AATTCACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTGCAGTTCACATATGTTTaGCTCTTCACTATAATGGAG +
Preference number: 4 (lower is better)
Translates to: NSHPANIPGECHPLACPLQFTYV*LFTIME
Trigger: CTCCATTATAGTGAAGAGCCAAACATATGTGAACTG...CAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR TCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTCGATACACCGTCTTaGAGGAGCCACGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLALDTPS*RSHVQS
Trigger: AGATTGGACGTGGCTCCTTCAAGACGGTGTATCGAG...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGAGACATTGTCGCACTTaGGATCCCGGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLRHCRT*DPGAGW
Trigger: CCATCCTGCACCGGGATCTCAAGTGCGACAATGTCT...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGAACTAAGAGTGACCTaGGAACAAGTGGGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VDQKASDSENTSSMVGPGELRVT*EQVGEN
Trigger: GTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTC...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGCACTTGAGATCCCGGTaGAGGATGGGAGGAACCCGG +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMHLRSR*RMGGTR
Trigger: CCGGGTTCCTCCCATCCTGCACCGGGATCTCAAGTG...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAGCTCCAGGGAGGTGCTaGTCTGGAGCTCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPAPGRC*SGALHW
Trigger: CCAATGAAGAGCTCCAGAGCAGCACCTCCCTGGAGC...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAATGCTCAAACACAGGCTaGTGTAGGAGTAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQCSNTG*CRSSSS
Trigger: GGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCA...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACGACGTTGCCACAGCCTaGGTCTCCATGTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHDVATA*VSMSSF
Trigger: AAAGGAGGACATGGAGACCCAGGCTGTGGCAACGTC...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAAGGCCACCTCCACTGTaGTGTCGGTGTCTAGCCCTC +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGRPPPL*CRCLAL
Trigger: GAGGGCTAGACACCGACACCACAGTGGAGGTGGCCT...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAAGGCCACCTCCACTGTaGTGTCGGTGTCTAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIRPPPL*CRCLAL
Trigger: GAGGGCTAGACACCGACACCACAGTGGAGGTGGCCT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTTTCTCACGCTTTCGCTaGATGGCAGCAACCCGTTCA +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPFSRFR*MAATRS
Trigger: TGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAA...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTAGGGTCTCCACTCGCTaGATAATCTCCCGAATCCGT +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPRVSTR*IISRIR
Trigger: ACGGATTCGGGAGATTATCCAGCGAGTGGAGACCCT...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAGGGGAAGATGGGACCTaGGGAAATGGGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIGEDGT*GNGGSR
Trigger: CCTGGAACCCCCATTTCCCCAGGTCCCATCTTCCCC...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGTGTGCTGGAGGAGAATaGAAGTGGAGAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLCAGGE*KWRAGG
Trigger: CCCACCAGCTCTCCACTTCCATTCTCCTCCAGCACA...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAGGTGAAGGGCTTTCCTaGCCACCAGGAGCAACGGGA +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIGEGLS*PPGATG
Trigger: TCCCGTTGCTCCTGGTGGCCAGGAAAGCCCTTCACC...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTGGTGAAGGGCTTTCCTaGCCACCAGGAGCAACGGGA +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQAGEGLS*PPGATG
Trigger: TCCCGTTGCTCCTGGTGGCCAGGAAAGCCCTTCACC...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTTCATCCACACTGGGCTaGGATGGCTCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQASSTLG*DGSGVG
Trigger: CCCAACCCCTGAGCCATCCCAGCCCAGTGTGGATGA...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAGGACAGCATAGCAGCTaGGGCCACAATACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGGQHSS*GHNTRW
Trigger: CCACCGGGTATTGTGGCCCCAGCTGCTATGCTGTCC...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGTGGTGGGCCCTGGTGTaGGGGAGATACATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVWWALV*GRYMAS
Trigger: AGAAGCCATGTATCTCCCCCACACCAGGGCCCACCA...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGCTCCATGGTGGGCCCTaGTGTGGGGGAGATACATGG +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMLHGGP*CGGDTW
Trigger: CCATGTATCTCCCCCACACCAGGGCCCACCATGGAG...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAACACAAGCTCCATGGTaGGCCCTGGTGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTITQAPW*ALVWGR
Trigger: TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGCAACTACCCCTTCAGTGTTaGGATCTTCCTTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: EVLEMKMVGSRTNTSTQQLPLQC*DLPCSV
Trigger: AACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAG...TTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAATTCCGGGGTCCCGATaGCACTCTTGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGIPGSR*HSWQRR
Trigger: CCTCCTTTGCCAAGAGTGTCATCGGGACCCCGGAAT...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAGCTTTCTGCCCGAAGTaGCCTTGCGGTAGATTTGCG +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPAFCPK*PCGRFA
Trigger: CGCAAATCTACCGCAAGGTCACTTCGGGCAGAAAGC...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR TCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAATCCGAAGTGGTAGATaGGTAGCTGGCGTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPIRSGR*VAGVAE
Trigger: TTCCGCCACGCCAGCTACTCATCTACCACTTCGGAT...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGTCTCCCGAATCCGTCTaGGAAATCCATCTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVSPESV*EIHLAP
Trigger: CGGAGCGAGATGGATTTCTCAGACGGATTCGGGAGA...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACCTGAGCTCTCTGAAGTaGGCTGAGGGGTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHLSSLK*AEGLKV
Trigger: AACCTTCAACCCCTCAGCTCACTTCAGAGAGCTCAG...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTATATACCATGGCAGCTaGAATCTCTTCCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLAIYHGS*NLFRAV
Trigger: GACAGCCCGGAAGAGATTGCAGCTGCCATGGTATAT...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACAAACGCCCAACAAGCTaGGGCTTTCCCTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHKRPTS*GFPSSE
Trigger: CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTT...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGAAACGCCCAACAAGCTaGGGCTTTCCCTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLKRPTS*GFPSSE
Trigger: CTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTT...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATTCTGCCGAAGACTCTaGAGCTCAGCCCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPFCRRL*SSAQNS
Trigger: GGAGTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAA...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp GTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTTCTGAATTCACATCCTaGCAACATCCCCGGCGAATG +
Preference number: 4 (lower is better)
Translates to: VGSRTNTSTQQTVHICLASEFTS*QHPRRM
Trigger: CATTCGCCGGGGATGTTGGCAGGATGTGAATTCAGA...AGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAAGCACGATGCAAACCTaGCCCCTCAGCACCGACTTC +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTISTMQT*PLSTDF
Trigger: GAAGTCGGTGCTGAGGGGCCAGGTTTGCATCGTGCT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAAGGTCCTGGCTCTGGTaGGAGTGCCTCCAATTCCCT +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIRSWLW*ECLQFP
Trigger: AGGGAATTGGAGGCACTCCCACCAGAGCCAGGACCT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGTGGAGGTCCTGGCTCTaGTGGGAGTGCCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMWRSWL*WECLQF
Trigger: GAATTGGAGGCACTCCCACCAGAGCCAGGACCTCCA...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAAAGGGGAACTAAGAGTGACCTGAGAACAAGTGGGAGAGAACGTAGGTGGAGAACTCGTTATATACCATaGCAGCTGCAATCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: ERGTKSDLRTSGRERRWRTRYIP*QLQSLP
Trigger: CGGAAGAGATTGCAGCTGCCATGGTATATAACGAGT...TCTCCACCTACGTTCTCTCCCACTTGTTCTCAGGTCACTCTTAGTTCCCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGTCTGGAGCTCTTCATTaGATGGGTCTGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVSGALH*MGLGGG
Trigger: TCCCCCTCCCAGACCCATCCAATGAAGAGCTCCAGA...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAAGGGAGGTGCTGCTCTaGAGCTCTTCATTGGATGGG +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPREVLL*SSSLDG
Trigger: CCCATCCAATGAAGAGCTCCAGAGCAGCACCTCCCT...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAGAGAGTGGGGGATGTTaGCTGCAAGGGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIESGGC*LQGKRL
Trigger: GAGCCTCTTCCCTTGCAGCCAACATCCCCCACTCTC...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTTCTCGATGTCAAACTTaGGGTATCGGCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQASRCQT*GIGHRG
Trigger: CCCCCGATGGCCGATACCTCAAGTTTGACATCGAGA...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGCGGGAGTGTAGGAAATaGAGTCCCCGCAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMRECRK*SPRRIW
Trigger: CCAAATCCTGCGGGGACTTCATTTCCTACACTCCCG...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATCCGAAGTGGTAGATaGGTAGCTGGCGTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIIRSGR*VAGVAE
Trigger: TTCCGCCACGCCAGCTACTCATCTACCACTTCGGAT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAAGCCGGTTCCTTGGATaGAGTCACTTGGAAACGCCC +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTISRFLG*SHLETP
Trigger: GGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGCTGAGCTCTCTGAAGTaGGCTGAGGGGTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVLSSLK*AEGLKV
Trigger: AACCTTCAACCCCTCAGCTCACTTCAGAGAGCTCAG...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGTGGCTCTGGTGGGAGTaGCTCCAATTCCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVWLWWE*LQFPCF
Trigger: AAAGCAAGGGAATTGGAGGCACTCCCACCAGAGCCA...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGATTCTGCCGAAGACTCTaGAGCTCAGCCCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGFCRRL*SSAQNS
Trigger: GGAGTTCTGGGCTGAGCTGCAGAGTCTTCGGCAGAA...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGAGGCTTGGGTGGGATTaGTTAGTGGTTGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLRLGWD*LVVDSW
Trigger: CCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCT...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CCA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATTTGCGCGGCATTCTaGCACTCGGAGTACGGGTAC +
Preference number: 4 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIICAAF*HSEYGY
Trigger: GTACCCGTACTCCGAGTGCCAGAATGCCGCGCAAAT...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTTGGTTGCTGCTAATGTaGTGTGAGCATATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: FVDQKASDSENTSSMVGPWLLLM*CEHIPY
Trigger: GTAGGGGATATGCTCACACCACATTAGCAGCAACCA...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
3UTR CAA 72 bp CCCTGGCCTTCTACCCCTTCAGTGTTGGGATCTTCCTaGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: PWPSTPSVLGSS*LSFVDQKASDS
Trigger: AGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAGAAGGCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCTCGATACACCGTCTTaGAGGAGCCACGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQALDTPS*RSHVQS
Trigger: AGATTGGACGTGGCTCCTTCAAGACGGTGTATCGAG...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGTGCCTCCAATTCCCTTaGTTTACGCAGCTTCTCACG +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVCLQFP*FTQLLT
Trigger: CGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCA...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTTGGCTCTGGTGGGAGTaGCTCCAATTCCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQAWLWWE*LQFPCF
Trigger: AAAGCAAGGGAATTGGAGGCACTCCCACCAGAGCCA...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACGGATTTGAGGAGACCTaGGAAGAAATGGGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: SRTNTSTQQTVHICLALHGFEET*EEMGEN
Trigger: ATTCTCCCCCATTTCTTCCCAGGTCTCCTCAAATCC...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAGTGTGGAGAGGGATTTaGGGAGACCTGGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGVWRGI*GDLGRN
Trigger: ATTTCTTCCCAGGTCTCCTCAAATCCCTCTCCACAC...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGAAAGCATCAGATTCTaGGAACACAAGCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLESIRF*EHKLHG
Trigger: ACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTC...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGCTGCTAATGTGGTGTaGGCATATCCCCTACACTCT +
Preference number: 4 (lower is better)
Translates to: LLSFVDQKASDSENTSSMAANVV*AYPLHS
Trigger: AGAGTGTAGGGGATATGCTCACACCACATTAGCAGC...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR GCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGATGCCTCCAATTCCCTTaGTTTACGCAGCTTCTCACG +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGCLQFP*FTQLLT
Trigger: CGTGAGAAGCTGCGTAAAGCAAGGGAATTGGAGGCA...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAGGAAGGTCACCATCTTaGTGTTATGGGTCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPGRSPS*CYGSVA
Trigger: AGCTACAGACCCATAACAGCAAGATGGTGACCTTCC...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR GCA 90 bp CTTCCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTTCTGAATTCACATCCTaGCAACATCCCCGGCGAATG +
Preference number: 4 (lower is better)
Translates to: LPCSVLLIRKHQILRTQASEFTS*QHPRRM
Trigger: CATTCGCCGGGGATGTTGGCAGGATGTGAATTCAGA...AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCAACCATCTTGCTGTTATaGGTCTGTAGCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPTILLL*VCSWHS
Trigger: TGAGTGCCAGCTACAGACCCATAACAGCAAGATGGT...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGACCATCTTGCTGTTATaGGTCTGTAGCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: LSFVDQKASDSENTSSMVTILLL*VCSWHS
Trigger: TGAGTGCCAGCTACAGACCCATAACAGCAAGATGGT...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR CAA 72 bp CCCCTTCAGTGTTGGGATCTTCCTTGCTCAGTTTTGTaGATCAGAAAGCATCAGATTCTGAGAACACAAGCT +
Preference number: 4 (lower is better)
Translates to: PLQCWDLPCSVL*IRKHQILRTQA
Trigger: AGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAGATCCCAACACTGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
3UTR CAA 72 bp ACTAACACCTCCACACAGCAAACAGTTCACATATGTTaGGCTCTTCACTATAATGGAGCTGCACTCTCCATG +
Preference number: 4 (lower is better)
Translates to: TNTSTQQTVHIC*ALHYNGAALSM
Trigger: CATGGAGAGTGCAGCTCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR TCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAGCTCCGAAGGCAGAATaGACTCGTTATATACCATGG +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGAPKAE*TRYIPW
Trigger: CCATGGTATATAACGAGTTCATTCTGCCTTCGGAGC...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAACTCGTTATATACCATaGCAGCTGCAATCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGTRYIP*QLQSLP
Trigger: CGGAAGAGATTGCAGCTGCCATGGTATATAACGAGT...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CCA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGACAGTTCACATATGTTTaGCTCTTCACTATAATGGAG +
Preference number: 4 (lower is better)
Translates to: NTSTQQTVHICLALHYNGQFTYV*LFTIME
Trigger: CTCCATTATAGTGAAGAGCCAAACATATGTGAACTG...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS CCA 90 bp GCCGCCGCTCTAGGGCCACAGCTTCAGGGACCCTTAGCGGCTCCCTaGACCCCGGGCCCACTGCAGAGTCCGGGAGCTCGGGACGCGCGG +
Preference number: 5 (lower is better)
Translates to: AAALGPQLQGPLAAP*TPGPLQSPGARDAR
Trigger: CCGCGCGTCCCGAGCTCCCGGACTCTGCAGTGGGCCCGGGGTCCAGGGAGCCGCTAAGGGTCCCTGAAGCTGTGGCCCTAGAGCGGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCGCAAAGGAGGCGCGCTaGAGCGTGGCCAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: DPQLHGRSQPELPWSLARAKEAR*SVARPR
Trigger: CCTGGGCCTGGCCACGCTCAAGCGCGCCTCCTTTGC...GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS TCA 90 bp GGGACCAAGAGCTCAGCAGCCCCAAGTCGACTGAGCTACGGCGGCTaGGACGAGAAGAGCGCGGCCGGGGCTCAGCCTTCCCGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GTKSSAAPSRLSYGG*DEKSAAGAQPSRRS
Trigger: GCTTCTCCGGGAAGGCTGAGCCCCGGCCGCGCTCTTCTCGTCTCAGCCGCCGTAGCTCAGTCGACTTGGGGCTGCTGAGCTCTTGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp CTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCGAGCGCTGTAGGCTGTaGCGGCGGGAGGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LARCSWEPVLLPLREFLRERCRL*RREVGK
Trigger: CTTCCCCACCTCCCGCCGCAACAGCCTACAGCGCTC...GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp TCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCCTCATTTGTCCCATCCCAAGTCCCCGCAGGATTaGGCGGCTCCAGCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SGSAPEIPPWGSPHLSHPKSPQD*AAPALK
Trigger: CTTCAGCGCTGGAGCCGCCAAATCCTGCGGGGACTT...GGGATGGGACAAATGAGGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS CCA 90 bp TCCGCTAGTTCCACGTGCACACCGCGCTCCTCGCGGAAGAAGGCGTaGGCCAGGAGGTCCTGGATGGTGAACCGAAGTGACCTTGCGGTA +
Preference number: 5 (lower is better)
Translates to: SASSTCTPRSSRKKA*ARRSWMVNRSDLAV
Trigger: TACCGCAAGGTCACTTCGGTTCACCATCCAGGACCTCCTGGCCCACGCCTTCTTCCGCGAGGAGCGCGGTGTGCACGTGGAACTAGCGGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGCCATCGGGGGACGTaGCCACAGCCTGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSGHRGT*PQPGSP
Trigger: TGGAGACCCAGGCTGTGGCAACGTCCCCCGATGGCC...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS CCA 90 bp TCCGCTAGTTCCACGTGCACACCGCGCTCCTCGCGGAAGAAGGCGTaGGCCAGGAGGTCCTGGATGGTGAACCTCTCGTTCTTATCCGTG +
Preference number: 5 (lower is better)
Translates to: SASSTCTPRSSRKKA*ARRSWMVNLSFLSV
Trigger: CACGGATAAGAACGAGAGGTTCACCATCCAGGACCTCCTGGCCCACGCCTTCTTCCGCGAGGAGCGCGGTGTGCACGTGGAACTAGCGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCCTCTGGAGCTCTTCATaGGATGGGTCTGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCLWSSS*DGSGRG
Trigger: CCCCCTCCCAGACCCATCCAATGAAGAGCTCCAGAG...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGCGAATGTCACCCCCTaGCTTGCCCGCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSANVTP*LARCSW
Trigger: CCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGC...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp CTTGCCCGCTGCTCCTGGGAGCCGGTGCTGCTGCCACTCAGAGAGTTCCTTCGCAAGACATTGTCGCACTaGAGATCCCGGTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: LARCSWEPVLLPLREFLRKTLSH*RSRCRM
Trigger: CATCCTGCACCGGGATCTCAAGTGCGACAATGTCTT...GCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp GAGACACTAGTGACCCGCAGCCGGGATCGGGGTCTGCGCCGGAGATTCCTCCCTCGGAAGGTCACCATCTaGCTGTTATGGGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: ETLVTRSRDRGLRRRFLPRKVTI*LLWVCS
Trigger: GCTACAGACCCATAACAGCAAGATGGTGACCTTCCG...AGGGAGGAATCTCCGGCGCAGACCCCGATCCCGGCTGCGGGTCACTAGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS GCA 90 bp CAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCACGTACTaGACGGGCCACTGGCTGGTAATCGGCTTCACAGACCAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: QLLTLSLDGSNPFTY*TGHWLVIGFTDQAQ
Trigger: CTGGGCTTGGTCTGTGAAGCCGATTACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246914.10
ENST00000587705.5
ENST00000591448.5
ENST00000592072.1
CDS CCA 90 bp CTTTCGCTGGATGGCAGCAACCCGTTCACGTACTGCACGGGCCACTaGCTGGTAATCGGCTTCACAGACCAAGCCCAGAGCCACCATCTC +
Preference number: 5 (lower is better)
Translates to: LSLDGSNPFTYCTGH*LVIGFTDQAQSHHL
Trigger: GAGATGGTGGCTCTGGGCTTGGTCTGTGAAGCCGATTACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246914.10
ENST00000587705.5
ENST00000591448.5
ENST00000592072.1
CDS-3UTR CAA 90 bp TCTCCCAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCCCTCGATACACCGTCTaGAAGGAGCCACGTCCAATC +
Preference number: 5 (lower is better)
Translates to: SPSWEWAPLEASRLGWDCPRYTV*KEPRPI
Trigger: GATTGGACGTGGCTCCTTCAAGACGGTGTATCGAGG...GCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp AATTCACATCCTGCCAACATCCCCGGCGAATGTCACCCCCTTGCTTGCCCGCTGCCCAGGTCCCCGATTTaGACAGAGCCAGTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: NSHPANIPGECHPLACPLPRSPI*TEPVGP
Trigger: GGGACCTACTGGCTCTGTCAAAATCGGGGACCTGGG...CAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp TCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCCTCATTTGTCCCATCCCGGCTCAGCCGGTTCCTaGGATGAAGTCACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: SGSAPEIPPWGSPHLSHPGSAGS*DEVTWK
Trigger: TTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCC...GGGATGGGACAAATGAGGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp TGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTTCAGAGATGGGCGCCAGCCTGCCTCGATACACCGTCTaGAAGGAGCCACGTCCAATC +
Preference number: 5 (lower is better)
Translates to: WKRPTSCGFPSSEMGASLPRYTV*KEPRPI
Trigger: GATTGGACGTGGCTCCTTCAAGACGGTGTATCGAGG...CAGGCTGGCGCCCATCTCTGAAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCCCCAGGTCCCCGATTTaGACAGAGCCAGTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGPRSPI*TEPVGP
Trigger: GGGACCTACTGGCTCTGTCAAAATCGGGGACCTGGG...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCGTCCCGATGACACTCTaGGCAAAGGAGGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGVPMTL*AKEARL
Trigger: CAAGCGCGCCTCCTTTGCCAAGAGTGTCATCGGGAC...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCGTGTTGGGATCTTCCTaGCTCAGTTTTGTTGATCAG +
Preference number: 5 (lower is better)
Translates to: DPQLHGRSQPELPWSLARVLGSS*LSFVDQ
Trigger: CTGATCAACAAAACTGAGCAAGGAAGATCCCAACAC...GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp AAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGAGTCCCGATGACACTCTaGGCAAAGGAGGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: KHQILRTQAPWWALVWGRVPMTL*AKEARL
Trigger: CAAGCGCGCCTCCTTTGCCAAGAGTGTCATCGGGAC...TCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GGGAGAGAACGTAGGTGGAGAAGTCGTGGGGAGAGAACTCCAGGGACACTGAGATGGGGGTCTCCTCATTaGTCCCATCCCTTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GRERRWRSRGERTPGTLRWGSPH*SHPFSH
Trigger: GTGGGAGAAGGGATGGGACAAATGAGGAGACCCCCA...TCTCAGTGTCCCTGGAGTTCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGTGGGGAAGCTGCCCTaGGAGAGGCGGCGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: FVDQKASDSENTSSMVGPVGKLP*ERRRWR
Trigger: CCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCCCCAC...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS TCA 90 bp GGGGGATGTTGGCTGCAAGGGAAGAGGCTCAGCCGGTTCCTTGGATaGAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCATT +
Preference number: 5 (lower is better)
Translates to: GGCWLQGKRLSRFLG*SHLETPNKLRLSLI
Trigger: AATGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGCAGCCAACATCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587745.1
CDS CCA 90 bp GGCTGCAAGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTaGAAACGCCCAACAAGCTGCGGCTTTCCCTCATTGGATGGGTCT +
Preference number: 5 (lower is better)
Translates to: GCKGRGSAGSLDEVT*KRPTSCGFPSLDGS
Trigger: AGACCCATCCAATGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587745.1
CDS-3UTR CAA 90 bp CAGCTGGGAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTAAGACATTGTCGCACTaGAGATCCCGGTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QLGVGPSRSIQAWVGLLSKTLSH*RSRCRM
Trigger: CATCCTGCACCGGGATCTCAAGTGCGACAATGTCTT...ACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTCGCCTCAGGTACGTCTaGAGCGTGCCCGAGGTCATG +
Preference number: 5 (lower is better)
Translates to: VDQKASDSENTSSMVGPGRLRYV*SVPEVM
Trigger: CATGACCTCGGGCACGCTCAAGACGTACCTGAGGCG...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACGCAAAGGAGGCGCGCTaGAGCGTGGCCAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SRTNTSTQQTVHICLALHAKEAR*SVARPR
Trigger: CCTGGGCCTGGCCACGCTCAAGCGCGCCTCCTTTGC...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GAGTGGGCCCCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACGGCTCAGCCGGTTCCTaGGATGAAGTCACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: EWAPLEASRLGWDCLVVDGSAGS*DEVTWK
Trigger: TTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCC...GTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGGGGCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp GGGGAGGTGCTAGAGATGAAGATGGTAGGCAGCAGAACTAACACCTCCACACAGAGAGAGTGGGGGATGTaGGCTGCAAGGGAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: GEVLEMKMVGSRTNTSTQREWGM*AAREEA
Trigger: AGCCTCTTCCCTTGCAGCCAACATCCCCCACTCTCT...CTGTGTGGAGGTGTTAGTTCTGCTGCCTACCATCTTCATCTCTAGCACCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp AGAGTGGGACCGGAAACTCGGGTGTGCTGGAGGAGAATGGAAGTGGAGAGCTGGTCTACCCCTTCAGTGTaGGGATCTTCCTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: RVGPETRVCWRRMEVESWSTPSV*GSSLLS
Trigger: ACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAGA...CCAGCTCTCCACTTCCATTCTCCTCCAGCACACCCGAGTTTCCGGTCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS CCA 90 bp AGCCTATGTCTGCCCGGCCCCAGGGAGAAACTGAGTCAGGGGGCATaGTGGATAGACATGACGTTACCAAACGGGTTGGGAAGTAAATTG +
Preference number: 5 (lower is better)
Translates to: SLCLPGPREKLSQGA*WIDMTLPNGLGSKL
Trigger: CAATTTACTTCCCAACCCGTTTGGTAACGTCATGTCTATCCACCATGCCCCCTGACTCAGTTTCTCCCTGGGGCCGGGCAGACATAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS-3UTR CAA 90 bp ATGGTAGGCAGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGATGCGCAGCCAGAGCTaGAGGCCCGGCTTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: MVGSRTNTSTQQTVHICLMRSQS*RPGFSP
Trigger: CGGCGAGAAGCCGGGCCTCAAGCTCTGGCTGCGCAT...CAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCTGCCTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp TCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCCTCATTTGTCCCATCCCCCTTGCTCAGTTTTGTaGATCAGAAAGCATCAGATT +
Preference number: 5 (lower is better)
Translates to: SGSAPEIPPWGSPHLSHPPCSVL*IRKHQI
Trigger: AATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG...GGGATGGGACAAATGAGGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCATCGGGGGACGTaGCCACAGCCTGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LSFVDQKASDSENTSSMVGHRGT*PQPGSP
Trigger: TGGAGACCCAGGCTGTGGCAACGTCCCCCGATGGCC...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GTGTCTCTCTTCAACAGGGTCTCCACTCGCTGGATAATCTCCCGAATCCGTCTGCCCGTGATAAAGACATaGTCGCACTTGAGATCCCGG +
Preference number: 5 (lower is better)
Translates to: VSLFNRVSTRWIISRIRLPVIKT*SHLRSR
Trigger: CCGGGATCTCAAGTGCGACAATGTCTTTATCACGGG...CAGACGGATTCGGGAGATTATCCAGCGAGTGGAGACCCTGTTGAAGAGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp AGCAGAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACGGGCCATGGGCACAGTaGCTGGTGGAGGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SRTNTSTQQTVHICLALHGPWAQ*LVEVLA
Trigger: AGCCAGGACCTCCACCAGCAACTGTGCCCATGGCCC...GTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp AAATCCATCTCGCTCCGAAGGCAGAATGAACTCGTTATATACCATGGCAGCTGCCTCTGGAGCTCTTCATaGGATGGGTCTGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KSISLRRQNELVIYHGSCLWSSS*DGSGRG
Trigger: CCCCCTCCCAGACCCATCCAATGAAGAGCTCCAGAG...GCAGCTGCCATGGTATATAACGAGTTCATTCTGCCTTCGGAGCGAGATGGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS CCA 90 bp CTATGTCTGCCCGGCCCCAGGGAGAAACTGAGTCAGGGGGCATGGTaGATAGACATGACGTTACCAAACGGGTTGGGAAGTAAATTGATA +
Preference number: 5 (lower is better)
Translates to: LCLPGPREKLSQGAW*IDMTLPNGLGSKLI
Trigger: TATCAATTTACTTCCCAACCCGTTTGGTAACGTCATGTCTATCCACCATGCCCCCTGACTCAGTTTCTCCCTGGGGCCGGGCAGACATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS-3UTR CAA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAATGCGCAGCCAGAGCTaGAGGCCCGGCTTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: NTSTQQTVHICLALHYNGMRSQS*RPGFSP
Trigger: CGGCGAGAAGCCGGGCCTCAAGCTCTGGCTGCGCAT...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGGCCATGGGCACAGTaGCTGGTGGAGGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LSFVDQKASDSENTSSMVGPWAQ*LVEVLA
Trigger: AGCCAGGACCTCCACCAGCAACTGTGCCCATGGCCC...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAGAGCGCTGTAGGCTGTaGCGGCGGGAGGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIERCRL*RREVGK
Trigger: CTTCCCCACCTCCCGCCGCAACAGCCTACAGCGCTC...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTCGGAAGGTCACCATCTaGCTGTTATGGGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: VDQKASDSENTSSMVGPGRKVTI*LLWVCS
Trigger: GCTACAGACCCATAACAGCAAGATGGTGACCTTCCG...ACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAGCGAATGTCACCCCCTaGCTTGCCCGCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NTSTQQTVHICLALHYNGANVTP*LARCSW
Trigger: CCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGC...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp TTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGAAGTCCCCGCAGGATTaGGCGGCTCCAGCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LLSFVDQKASDSENTSSMKSPQD*AAPALK
Trigger: CTTCAGCGCTGGAGCCGCCAAATCCTGCGGGGACTT...CATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp GATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTGTGGGGGAGATACATGGCCCTTGCTCAGTTTTGTaGATCAGAAAGCATCAGATT +
Preference number: 5 (lower is better)
Translates to: DSENTSSMVGPGVGEIHGPCSVL*IRKHQI
Trigger: AATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG...GCCATGTATCTCCCCCACACCAGGGCCCACCATGGAGCTTGTGTTCTCAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp TTCCCTTGCTTTACGCAGCTTCTCACGCTTTCGCTGGATGGCAGCAACCCGTTCCTTCCTTGCTCAGTTTaGTTGATCAGAAAGCATCAG +
Preference number: 5 (lower is better)
Translates to: FPCFTQLLTLSLDGSNPFLPCSV*LIRKHQ
Trigger: CTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG...GAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCAAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp CCTCTAGAAGCATCCAGGCTTGGGTGGGATTGCTTAGTGGTTGACTCTTGGCAGGTGTTGGGATCTTCCTaGCTCAGTTTTGTTGATCAG +
Preference number: 5 (lower is better)
Translates to: PLEASRLGWDCLVVDSWQVLGSS*LSFVDQ
Trigger: CTGATCAACAAAACTGAGCAAGGAAGATCCCAACAC...CTGCCAAGAGTCAACCACTAAGCAATCCCACCCAAGCCTGGATGCTTCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS CCA 90 bp GCACACATACAGAGGGGAGAGGAAGAGACAATGATGACGCTAAGGTaGCAAAACACTAACAAGTGGCAAATCTGGGCAAAGGGTATCCAG +
Preference number: 5 (lower is better)
Translates to: AHIQRGEEETMMTLR*QNTNKWQIWAKGIQ
Trigger: CTGGATACCCTTTGCCCAGATTTGCCACTTGTTAGTGTTTTGCCACCTTAGCGTCATCATTGTCTCTTCCTCTCCCCTCTGTATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592072.1
CDS-3UTR CAA 90 bp GGGAGAGAACGTAGGTGGAGAAGTCGTGGGGAGAGAACTCCAGGGACACTGAGAACAGTTCACATATGTTaGGCTCTTCACTATAATGGA +
Preference number: 5 (lower is better)
Translates to: GRERRWRSRGERTPGTLRTVHIC*ALHYNG
Trigger: TCCATTATAGTGAAGAGCCAAACATATGTGAACTGT...TCTCAGTGTCCCTGGAGTTCTCTCCCCACGACTTCTCCACCTACGTTCTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591448.5
CDS-3UTR CAA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTTCGGGTATCTTCACCTaGTGGAAGCTGTTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: FVDQKASDSENTSSMVGPSGIFT*WKLFGF
Trigger: AAAGCCGAACAGCTTCCACAAGGTGAAGATACCCGA...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp GAACTAACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATATGGGGGTCTCCTCATTaGTCCCATCCCTTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: ELTPPHSKQFTYVWLFTIWGSPH*SHPFSH
Trigger: GTGGGAGAAGGGATGGGACAAATGAGGAGACCCCCA...TATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTTAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp CTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGCCCGTGATAAAGACATaGTCGCACTTGAGATCCCGG +
Preference number: 5 (lower is better)
Translates to: LSFVDQKASDSENTSSMVPVIKT*SHLRSR
Trigger: CCGGGATCTCAAGTGCGACAATGTCTTTATCACGGG...CACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATCTACCCCTTCAGTGTaGGGATCTTCCTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPSTPSV*GSSLLS
Trigger: ACTGAGCAAGGAAGATCCCAACACTGAAGGGGTAGA...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS-3UTR CAA 90 bp TTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCATGGTGGGCCCTTTTCCAGCATTTTTATaGGTTGCTGCTAATGTGGTG +
Preference number: 5 (lower is better)
Translates to: FVDQKASDSENTSSMVGPFPAFL*VAANVV
Trigger: CACCACATTAGCAGCAACCAATAAAAATGCTGGAAA...AGGGCCCACCATGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS-3UTR CAA 90 bp CCTTGCTCAGTTTTGTTGATCAGAAAGCATCAGATTCTGAGAACACAAGCTCCACTTCCTTGCTCAGTTTaGTTGATCAGAAAGCATCAG +
Preference number: 5 (lower is better)
Translates to: PCSVLLIRKHQILRTQAPLPCSV*LIRKHQ
Trigger: CTGATGCTTTCTGATCAACAAAACTGAGCAAGGAAG...TGGAGCTTGTGTTCTCAGAATCTGATGCTTTCTGATCAACAAAACTGAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS GCA 90 bp TGTCTGCAACTTACTCTTAAGTGGTTCCGAAAAATATATTATGTATaGACACATACAGAGGGGAGAGGAAGAGACAATGATGACGCTAAG +
Preference number: 5 (lower is better)
Translates to: CLQLTLKWFRKIYYV*THTEGRGRDNDDAK
Trigger: CTTAGCGTCATCATTGTCTCTTCCTCTCCCCTCTGTATGTGTGCATACATAATATATTTTTCGGAACCACTTAAGAGTAAGTTGCAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592072.1
CDS-3UTR CAA 90 bp AACACCTCCACACAGCAAACAGTTCACATATGTTTGGCTCTTCACTATAATGGAACAGTTCACATATGTTaGGCTCTTCACTATAATGGA +
Preference number: 5 (lower is better)
Translates to: NTSTQQTVHICLALHYNGTVHIC*ALHYNG
Trigger: TCCATTATAGTGAAGAGCCAAACATATGTGAACTGT...TCCATTATAGTGAAGAGCCAAACATATGTGAACTGTTTGCTGTGTGGAGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS TCA 72 bp CCCCGCGCCGCGCGTCCTCCATGCGCAGCCAGAGCTTaGGGCCCGGCTTCTCGCCGTCGTCCTCCTCCGCTA +
Preference number: 6 (lower is better)
Translates to: PRAARPPCAARA*GPASRRRPPPL
Trigger: TAGCGGAGGAGGACGACGGCGAGAAGCCGGGCCTCAAGCTCTGGCTGCGCATGGAGGACGCGCGGCGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246914.10
ENST00000587705.5
ENST00000591448.5
ENST00000592072.1
CDS CCA 72 bp CTAGGGCCACAGCTTCAGGGACCCTTAGCGGCTCCCTaGACCCCGGGCCCACTGCAGAGTCCGGGAGCTCGG +
Preference number: 6 (lower is better)
Translates to: LGPQLQGPLAAP*TPGPLQSPGAR
Trigger: CCGAGCTCCCGGACTCTGCAGTGGGCCCGGGGTCCAGGGAGCCGCTAAGGGTCCCTGAAGCTGTGGCCCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS GCA 72 bp CCCCCTGCCGCACCCTGCTGCCGCCTCCGCATCTTCTaGCAGCATTCTCCTAGCCTATGTCTGCCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: PPAAPCCRLRIF*QHSPSLCLPGP
Trigger: GGGGCCGGGCAGACATAGGCTAGGAGAATGCTGGCAGAAGATGCGGAGGCGGCAGCAGGGTGCGGCAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS CCA 72 bp TCCTGTGCCACCTCCTCGGCCGCGTCCCGGCCCAGCTaGAACAGGAACTCGATGGCCTGGTTGTCCCGTGGG +
Preference number: 6 (lower is better)
Translates to: SCATSSAASRPS*NRNSMAWLSRG
Trigger: CCCACGGGACAACCAGGCCATCGAGTTCCTGTTCCAGCTGGGCCGGGACGCGGCCGAGGAGGTGGCACAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246914.10
ENST00000587705.5
ENST00000591448.5
ENST00000592072.1
CDS TCA 72 bp AGCTCAGCAGCCCCAAGTCGACTGAGCTACGGCGGCTaGGACGAGAAGAGCGCGGCCGGGGCTCAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: SSAAPSRLSYGG*DEKSAAGAQPS
Trigger: GGAAGGCTGAGCCCCGGCCGCGCTCTTCTCGTCTCAGCCGCCGTAGCTCAGTCGACTTGGGGCTGCTGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS TCA 72 bp GCCTCGGCCAAGGTGCTGTGGGAGCGCAGGAAGGGATaGCTAACTGCCCCAAGCATGAGGGAGAGCTTCGGA +
Preference number: 6 (lower is better)
Translates to: ASAKVLWERRKG*LTAPSMRESFG
Trigger: TCCGAAGCTCTCCCTCATGCTTGGGGCAGTTAGTCATCCCTTCCTGCGCTCCCACAGCACCTTGGCCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS CCA 72 bp GATGGCAGCAACCCGTTCACGTACTGCACGGGCCACTaGCTGGTAATCGGCTTCACAGACCAAGCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: DGSNPFTYCTGH*LVIGFTDQAQS
Trigger: GCTCTGGGCTTGGTCTGTGAAGCCGATTACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTTGCTGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246914.10
ENST00000587705.5
ENST00000591448.5
ENST00000592072.1
CDS GCA 72 bp AGCCCCTTGAGCATCTCCACCTCCTCTGAGAAGCGCTaGCGCTCAGCTCTAGACAGTTTCCGAGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SPLSISTSSEKR*RSALDSFRVCS
Trigger: GCTGCAGACTCGGAAACTGTCTAGAGCTGAGCGGCAGCGCTTCTCAGAGGAGGTGGAGATGCTCAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246914.10
ENST00000591448.5
CDS GCA 72 bp ACGCTTTCGCTGGATGGCAGCAACCCGTTCACGTACTaGACGGGCCACTGGCTGGTAATCGGCTTCACAGAC +
Preference number: 6 (lower is better)
Translates to: TLSLDGSNPFTY*TGHWLVIGFTD
Trigger: GTCTGTGAAGCCGATTACCAGCCAGTGGCCCGTGCAGTACGTGAACGGGTTGCTGCCATCCAGCGAAAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246914.10
ENST00000587705.5
ENST00000591448.5
ENST00000592072.1
CDS CCA 72 bp CCCGGCCCCAGGGAGAAACTGAGTCAGGGGGCATGGTaGATAGACATGACGTTACCAAACGGGTTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: PGPREKLSQGAW*IDMTLPNGLGS
Trigger: ACTTCCCAACCCGTTTGGTAACGTCATGTCTATCCACCATGCCCCCTGACTCAGTTTCTCCCTGGGGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS GCA 72 bp CAAGGTGCTGTGGGAGCGCAGGAAGGGATGACTAACTaGCCCAAGCATGAGGGAGAGCTTCGGAGAGGAAAT +
Preference number: 6 (lower is better)
Translates to: QGAVGAQEGMTN*PKHEGELRRGN
Trigger: ATTTCCTCTCCGAAGCTCTCCCTCATGCTTGGGGCAGTTAGTCATCCCTTCCTGCGCTCCCACAGCACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS GCA 72 bp TCCTTGGATGAAGTCACTTGGAAACGCCCAACAAGCTaGGGCTTTCCCTCATTGGATGGGTCTGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: SLDEVTWKRPTS*GFPSLDGSGRG
Trigger: CCCCCTCCCAGACCCATCCAATGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587745.1
CDS CCA 72 bp GGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTaGAAACGCCCAACAAGCTGCGGCTTTCCCTCATTG +
Preference number: 6 (lower is better)
Translates to: GRGSAGSLDEVT*KRPTSCGFPSL
Trigger: CAATGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587745.1
CDS CAA 90 bp GCATGGTGGATAGACATGACGTTACCAAACGGGTTGGGAAGTAAATaGATAGATAGGGCCTCGGCCAAGGTGCTGTGGGAGCGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: AWWIDMTLPNGLGSK*IDRASAKVLWERRK
Trigger: CTTCCTGCGCTCCCACAGCACCTTGGCCGAGGCCCTATCTATCAATTTACTTCCCAACCCGTTTGGTAACGTCATGTCTATCCACCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS CAA 90 bp CTGAGTCAGGGGGCATGGTGGATAGACATGACGTTACCAAACGGGTaGGGAAGTAAATTGATAGATAGGGCCTCGGCCAAGGTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LSQGAWWIDMTLPNG*GSKLIDRASAKVLW
Trigger: CCACAGCACCTTGGCCGAGGCCCTATCTATCAATTTACTTCCCAACCCGTTTGGTAACGTCATGTCTATCCACCATGCCCCCTGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS TCA 72 bp ACCTCTCGTTCTTATCCGTGCGGATGCAGCCTTCAATaGTCTCCTTCACCTCGGGTATCTTCACCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: TSRSYPCGCSLQ*SPSPRVSSPCG
Trigger: TCCACAAGGTGAAGATACCCGAGGTGAAGGAGATCATTGAAGGCTGCATCCGCACGGATAAGAACGAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS CCA 72 bp TCAATGATCTCCTTCACCTCGGGTATCTTCACCTTGTaGAAGCTGTTCGGCTTTCTGCCCGAAGTGACCTTG +
Preference number: 6 (lower is better)
Translates to: SMISFTSGIFTL*KLFGFLPEVTL
Trigger: CAAGGTCACTTCGGGCAGAAAGCCGAACAGCTTCCACAAGGTGAAGATACCCGAGGTGAAGGAGATCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246914.10
CDS CAA 72 bp GGGGCATGGTGGATAGACATGACGTTACCAAACGGGTaGGGAAGTAAATTGATAGATAGGGCCTCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: GAWWIDMTLPNG*GSKLIDRASAK
Trigger: CTTGGCCGAGGCCCTATCTATCAATTTACTTCCCAACCCGTTTGGTAACGTCATGTCTATCCACCATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592669.1
CDS CCA 72 bp CAGAGGGGAGAGGAAGAGACAATGATGACGCTAAGGTaGCAAAACACTAACAAGTGGCAAATCTGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: QRGEEETMMTLR*QNTNKWQIWAK
Trigger: CTTTGCCCAGATTTGCCACTTGTTAGTGTTTTGCCACCTTAGCGTCATCATTGTCTCTTCCTCTCCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592072.1