RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000196632

Ensembl transcript IDs: ENST00000354646.6, ENST00000375159.6, ENST00000375169.7, ENST00000458404.1, ENST00000620763.1

Found 677 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACTGCAAGAGTCTGCAGGCAAACAAGAATGATGAATTATATGTaGAATAGAGGTGGTGGCCAAAGGCAGAACATAGGATGTAGAGCA +
Preference number: 1 (lower is better)
Translates to: GTARVCRQTRMMNYM*NRGGGQRQNIGCRA
Trigger: TGCTCTACATCCTATGTTCTGCCTTTGGCCACCACCTCTATTCCACATATAATTCATCATTCTTGTTTGCCTGCAGACTCTTGCAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR TCA 90 bp ACAGACCTTGAACAACTGCACTTTCCAGTTAGTCACTGTATCTGCTaGGGGTATGTTCTGGACCGCAAACCTCAATCTCAAATCTTAAGT +
Preference number: 1 (lower is better)
Translates to: TDLEQLHFPVSHCIC*GYVLDRKPQSQILS
Trigger: ACTTAAGATTTGAGATTGAGGTTTGCGGTCCAGAACATACCCTCAGCAGATACAGTGACTAACTGGAAAGTGCAGTTGTTCAAGGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR GCA 90 bp TGCTCACATTACCACATATGGAGATACAGTACTATTCATCAGACTTaGACTTTGAGAAGTAAACATGGTGGCTGGACATACAGACTATCC +
Preference number: 1 (lower is better)
Translates to: CSHYHIWRYSTIHQT*TLRSKHGGWTYRLS
Trigger: GGATAGTCTGTATGTCCAGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGATGAATAGTACTGTATCTCCATATGTGGTAATGTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR TCA 90 bp TCGAAACCTACTGTGTCAAGTAAATTTCACTTCAGAAGAATGGATTaGGGTGTAGCTTTAATCCCCCTTGTTAGGAATACAAGGATTCCC +
Preference number: 1 (lower is better)
Translates to: SKPTVSSKFHFRRMD*GVALIPLVRNTRIP
Trigger: GGGAATCCTTGTATTCCTAACAAGGGGGATTAAAGCTACACCTCAATCCATTCTTCTGAAGTGAAATTTACTTGACACAGTAGGTTTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR GCA 90 bp ATCAGCTGCAATATATGCCTTGCAAAAGAATGCAAGACAAACCAATaGCTCTCAGATGCTCAAAACCAATGTAGTATGCATGTGAGAAAC +
Preference number: 1 (lower is better)
Translates to: ISCNICLAKECKTNQ*LSDAQNQCSMHVRN
Trigger: GTTTCTCACATGCATACTACATTGGTTTTGAGCATCTGAGAGGCATTGGTTTGTCTTGCATTCTTTTGCAAGGCATATATTGCAGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR TCA 90 bp ATTACCACATATGGAGATACAGTACTATTCATCAGACTTGCACTTTaGGAAGTAAACATGGTGGCTGGACATACAGACTATCCTCTGAAT +
Preference number: 1 (lower is better)
Translates to: ITTYGDTVLFIRLAL*EVNMVAGHTDYPLN
Trigger: ATTCAGAGGATAGTCTGTATGTCCAGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGATGAATAGTACTGTATCTCCATATGTGGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR CCA 90 bp AATGTATACATAACATATATGATAACCCGGTTACTGCAGTCAGCATaGAGACAGCAGTACACTATTCACCATCTTCAAACTTTAGAAGAC +
Preference number: 1 (lower is better)
Translates to: NVYITYMITRLLQSA*RQQYTIHHLQTLED
Trigger: GTCTTCTAAAGTTTGAAGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATGTATACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR CCA 90 bp CATAGCAGCAGGTACTTCATGATGAAATGCTCACATTACCACATATaGAGATACAGTACTATTCATCAGACTTGCACTTTGAGAAGTAAA +
Preference number: 1 (lower is better)
Translates to: HSSRYFMMKCSHYHI*RYSTIHQTCTLRSK
Trigger: TTTACTTCTCAAAGTGCAAGTCTGATGAATAGTACTGTATCTCCATATGTGGTAATGTGAGCATTTCATCATGAAGTACCTGCTGCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCAGGAGGGGGAGGTTaGAGCAGTGAGCCAAGATCA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPGGGG*SSEPRS
Trigger: TGATCTTGGCTCACTGCTGCAACCTCCCCCTCCTGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGATCCCATAAGACTCTaGCTGATGGAGGGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLDPIRL*LMEGLS
Trigger: ACTGAGACCCTCCATCAGCCAGAGTCTTATGGGATC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCACCAAAACGTTTCCTaGAGCAAGTTACCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLHQNVS*SKLPCL
Trigger: AAGGCAGGGTAACTTGCTGCAGGAAACGTTTTGGTG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGGAGGTTGCAGCAGTaGGCCAAGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGRLQQ*AKITPL
Trigger: CAGTGGTGTGATCTTGGCTCACTGCTGCAACCTCCC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCAAAGGTGTACATTTTaGCATTGCCTCCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSQRCTF*HCLPSS
Trigger: GGAGGAGGGGAGGCAATGTCAAAATGTACACCTTTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCCAGGAGGGGGAGGTTaGAGCAGTGAGCCAAGATCA +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQPGGGG*SSEPRS
Trigger: TGATCTTGGCTCACTGCTGCAACCTCCCCCTCCTGG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGACAAACATGTGAAGTaGAGATCCCATAAGACTCTG +
Preference number: 2 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLDKHVK*RSHKTL
Trigger: CAGAGTCTTATGGGATCTTCACTTCACATGTTTGTC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGGGAGGTTGCAGCAGTaGGCCAAGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGGRLQQ*AKITPL
Trigger: CAGTGGTGTGATCTTGGCTCACTGCTGCAACCTCCC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTCAGAAGAATGGATTaGGGTGTAGCTTTAATCCCC +
Preference number: 2 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFRRMD*GVALIP
Trigger: GGGGATTAAAGCTACACCTCAATCCATTCTTCTGAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCTAAGACAAACATGTaGAGTGAAGATCCCATAAGA +
Preference number: 2 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPKTNM*SEDPIR
Trigger: TCTTATGGGATCTTCACTTCACATGTTTGTCTTAGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAAGGCTTCATCCTACTaGTGTGATGACGGGAAATCA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSKASSY*CDDGKS
Trigger: TGATTTCCCGTCATCACAGCAGTAGGATGAAGCCTT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGGTCTACTATCTCACTaGAGGACAGTGTATACCCCA +
Preference number: 2 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHGLLSH*RTVYTP
Trigger: TGGGGTATACACTGTCCTGCAGTGAGATAGTAGACC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGGCACTGCAAGAGTCTaGAGGCAAACAAGAATGATG +
Preference number: 2 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHGTARV*RQTRMM
Trigger: CATCATTCTTGTTTGCCTGCAGACTCTTGCAGTGCC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGATCCCATAAGACTCTaGCTGATGGAGGGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHDPIRL*LMEGLS
Trigger: ACTGAGACCCTCCATCAGCCAGAGTCTTATGGGATC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATACCCCACATCTCTaGGAACCCTGTAAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHYTPHL*EPCKAS
Trigger: ACTGGCTTTACAGGGTTCTCAGAGATGTGGGGTATA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTAGGTTTCACAGACTaGGCATTAGGTAACCCTGTG +
Preference number: 2 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLGFTD*ALGNPV
Trigger: CACAGGGTTACCTAATGCTCAGTCTGTGAAACCTAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGTCTACTATCTCACTaGAGGACAGTGTATACCCCA +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGLLSH*RTVYTP
Trigger: TGGGGTATACACTGTCCTGCAGTGAGATAGTAGACC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGCACTGCAAGAGTCTaGAGGCAAACAAGAATGATG +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGTARV*RQTRMM
Trigger: CATCATTCTTGTTTGCCTGCAGACTCTTGCAGTGCC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCTAAGACAAACATGTaGAGTGAAGATCCCATAAGA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPKTNM*SEDPIR
Trigger: TCTTATGGGATCTTCACTTCACATGTTTGTCTTAGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTGCAGTGTTCTATCTaGAAACTGCACATTTCTACA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVQCSI*KLHIST
Trigger: TGTAGAAATGTGCAGTTTGCAGATAGAACACTGCAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAAGGCTTCATCCTACTaGTGTGATGACGGGAAATCA +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHKASSY*CDDGKS
Trigger: TGATTTCCCGTCATCACAGCAGTAGGATGAAGCCTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCAGCAATTCTCAAAATaGTGCCCTAGATGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHQQFSK*CPRCLK
Trigger: TTTGAGGCATCTAGGGCAGCATTTTGAGAATTGCTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAATATTACAAGGCACTaGAAGAGTCTGCAGGCAAAC +
Preference number: 2 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHNITRH*KSLQAN
Trigger: GTTTGCCTGCAGACTCTTGCAGTGCCTTGTAATATT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCTTCTCAACAATTCATaGAAAGTGTCCTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLLNNS*KVSWKW
Trigger: CCATTTCCAGGACACTTTCCATGAATTGTTGAGAAG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTACCTGGCAAGCCCATaGGGTATAATTTTTAGAAGA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSYLASP*GIIFRR
Trigger: TCTTCTAAAAATTATACCCCATGGGCTTGCCAGGTA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTACCCTGCCTTCTGTaGAAGGTAAACCTAAGACAA +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLPCLL*KVNLRQ
Trigger: TTGTCTTAGGTTTACCTTTCACAGAAGGCAGGGTAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGGAGACAGCTGCTTTaGATTATTACTGAAATCGTA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRRQLL*IITEIV
Trigger: TACGATTTCAGTAATAATTCAAAGCAGCTGTCTCCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTATACCCCACATCTCTaGGAACCCTGTAAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGYTPHL*EPCKAS
Trigger: ACTGGCTTTACAGGGTTCTCAGAGATGTGGGGTATA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCAATTCTCAAAATGCTaGCCTAGATGCCTCAAATTA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSQFSKC*PRCLKL
Trigger: TAATTTGAGGCATCTAGGGCAGCATTTTGAGAATTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAATATTACAAGGCACTaGAAGAGTCTGCAGGCAAAC +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHNITRH*KSLQAN
Trigger: GTTTGCCTGCAGACTCTTGCAGTGCCTTGTAATATT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTCAGAAGAATGGATTaGGGTGTAGCTTTAATCCCC +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQFRRMD*GVALIP
Trigger: GGGGATTAAAGCTACACCTCAATCCATTCTTCTGAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTAGGTTTCACAGACTaGGCATTAGGTAACCCTGTG +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLGFTD*ALGNPV
Trigger: CACAGGGTTACCTAATGCTCAGTCTGTGAAACCTAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCTGCAATATATGCCTTaGAAAAGAATGCAAGACAAA +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLQYMP*KRMQDK
Trigger: TTTGTCTTGCATTCTTTTGCAAGGCATATATTGCAG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCAGCAATTCTCAAAATaGTGCCCTAGATGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQQQFSK*CPRCLK
Trigger: TTTGAGGCATCTAGGGCAGCATTTTGAGAATTGCTG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTACATATGGAAAACAGTaGAATGCAAGCATTTGCATT +
Preference number: 2 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSTYGKQ*NASICI
Trigger: AATGCAAATGCTTGCATTGCACTGTTTTCCATATGT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGTAGTGTTTACTTGTaGACCCAAAACAGCACTGAA +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGSVYL*TQNSTE
Trigger: TTCAGTGCTGTTTTGGGTGCACAAGTAAACACTACC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTACCCTGCCTTCTGTaGAAGGTAAACCTAAGACAA +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLPCLL*KVNLRQ
Trigger: TTGTCTTAGGTTTACCTTTCACAGAAGGCAGGGTAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGGAGACAGCTGCTTTaGATTATTACTGAAATCGTA +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRRQLL*IITEIV
Trigger: TACGATTTCAGTAATAATTCAAAGCAGCTGTCTCCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCATCAGACTTGCACTTTaGGAAGTAAACATGGTGGCT +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGIRLAL*EVNMVA
Trigger: AGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGAT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAACAGCAGCAGTATCTaGAGAATCAAGGAACTGTTA +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQNSSSI*RIKELL
Trigger: TAACAGTTCCTTGATTCTGCAGATACTGCTGCTGTT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGCAATATATGCCTTaGAAAAGAATGCAAGACAAA +
Preference number: 2 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLQYMP*KRMQDK
Trigger: TTTGTCTTGCATTCTTTTGCAAGGCATATATTGCAG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCTTCTCAACAATTCATaGAAAGTGTCCTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLLNNS*KVSWKW
Trigger: CCATTTCCAGGACACTTTCCATGAATTGTTGAGAAG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAGTAAACATGGTGGCTaGACATACAGACTATCCTCT +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSKHGG*TYRLSS
Trigger: AGAGGATAGTCTGTATGTCCAGCCACCATGTTTACT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR CAA 90 bp CATTACCACATATGGAGATACAGTACTATTCATCAGACTTGCACTTaGAGAAGTAAACATGGTGGCTGGACATACAGACTATCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: HYHIWRYSTIHQTCT*RSKHGGWTYRLSSE
Trigger: TTCAGAGGATAGTCTGTATGTCCAGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGATGAATAGTACTGTATCTCCATATGTGGTAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGTGCAGTGTTCTATCTaGAAACTGCACATTTCTACA +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGVQCSI*KLHIST
Trigger: TGTAGAAATGTGCAGTTTGCAGATAGAACACTGCAC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAAAAACATTTCTGTGTaGAGTGTTCTATCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHKNISV*SVLSAN
Trigger: GTTTGCAGATAGAACACTGCACACAGAAATGTTTTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAACAGCAGCAGTATCTaGAGAATCAAGGAACTGTTA +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGNSSSI*RIKELL
Trigger: TAACAGTTCCTTGATTCTGCAGATACTGCTGCTGTT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGATCAGCTGCAATATATaGCTTGCAAAAGAATGCAAG +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQISCNI*LAKECK
Trigger: CTTGCATTCTTTTGCAAGGCATATATTGCAGCTGAT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGATGATGAATTATATGTaGAATAGAGGTGGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQMMNYM*NRGGGQ
Trigger: TTGGCCACCACCTCTATTCCACATATAATTCATCAT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCTGGGGTTCTAAAATaGTATATCCCATCAAACTGT +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSGVLK*YIPSNC
Trigger: ACAGTTTGATGGGATATATCATTTTAGAACCCCAGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAAAAACATTTCTGTGTaGAGTGTTCTATCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGKNISV*SVLSAN
Trigger: GTTTGCAGATAGAACACTGCACACAGAAATGTTTTT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCACAAGGTTAGGAGTTaGAGACCAGTCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSHKVRS*RPVWPT
Trigger: TGTTGGCCAGACTGGTCTCAAACTCCTAACCTTGTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCCAAAGGTGTACATTTaGACATTGCCTCCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHPKVYI*TLPPLL
Trigger: GAGGAGGGGAGGCAATGTCAAAATGTACACCTTTGG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGCGACAGAATCTTCTaGATAATGGATGTGATCCTC +
Preference number: 3 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSDRIF*IMDVIL
Trigger: GAGGATCACATCCATTATCAAGAAGATTCTGTCGCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR TCA 72 bp GAACAACTGCACTTTCCAGTTAGTCACTGTATCTGCTaGGGGTATGTTCTGGACCGCAAACCTCAATCTCAA +
Preference number: 3 (lower is better)
Translates to: EQLHFPVSHCIC*GYVLDRKPQSQ
Trigger: TTGAGATTGAGGTTTGCGGTCCAGAACATACCCTCAGCAGATACAGTGACTAACTGGAAAGTGCAGTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR GCA 72 bp TCCCTCTGTCTCACCCAAAACAAGGCTTCATCCTACTaGTGTGATGACGGGAAATCACATTTAAAAAGGGCT +
Preference number: 3 (lower is better)
Translates to: SLCLTQNKASSY*CDDGKSHLKRA
Trigger: AGCCCTTTTTAAATGTGATTTCCCGTCATCACAGCAGTAGGATGAAGCCTTGTTTTGGGTGAGACAGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCCAAAGGTGTACATTTaGACATTGCCTCCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGPKVYI*TLPPLL
Trigger: GAGGAGGGGAGGCAATGTCAAAATGTACACCTTTGG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTCAGTTCATCCACATTaGGGGAGAATCAATCTAAAT +
Preference number: 3 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSVHPH*GRINLN
Trigger: ATTTAGATTGATTCTCCCCAAATGTGGATGAACTGA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCCAGTAAAGTGCAACTaGACAGTGATCTCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQPVKCN*TVISLR
Trigger: TCTGAGAGAGATCACTGTCAAGTTGCACTTTACTGG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGACAGGTAGTGTTTACTaGTGCACCCAAAACAGCACT +
Preference number: 3 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQTGSVY*CTQNST
Trigger: AGTGCTGTTTTGGGTGCACAAGTAAACACTACCTGT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR TCA 72 bp CAAAACGTTTCCTGCAGCAAGTTACCCTGCCTTCTGTaGAAGGTAAACCTAAGACAAACATGTGAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: QNVSCSKLPCLL*KVNLRQTCEVK
Trigger: CTTCACTTCACATGTTTGTCTTAGGTTTACCTTTCACAGAAGGCAGGGTAACTTGCTGCAGGAAACGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR TCA 72 bp TCCCAGGCTCCTTCATATATTGGCTGTCAGGGTTCCTaGCCAATGTTTGTGTTGATCTTTCACATACAAAGA +
Preference number: 3 (lower is better)
Translates to: SQAPSYIGCQGS*PMFVLIFHIQR
Trigger: TCTTTGTATGTGAAAGATCAACACAAACATTGGTCAGGAACCCTGACAGCCAATATATGAAGGAGCCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGTGTACATTTTGACATaGCCTCCCCTCCTCCTAAAA +
Preference number: 3 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGVYILT*PPLLLK
Trigger: TTTTAGGAGGAGGGGAGGCAATGTCAAAATGTACAC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATATGTTGGGTAGCAATTaGGAATGTTTACTAGTAGAC +
Preference number: 3 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHMLGSN*ECLLVD
Trigger: GTCTACTAGTAAACATTCCAAATTGCTACCCAACAT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR GCA 72 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTaGCCTTTAGGCACACAGACGAGAAATGCATCTCTA +
Preference number: 3 (lower is better)
Translates to: YFAVVVKAISTH*PLGTQTRNASL
Trigger: TAGAGATGCATTTCTCGTCTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTCAGTTCATCCACATTaGGGGAGAATCAATCTAAAT +
Preference number: 3 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSVHPH*GRINLN
Trigger: ATTTAGATTGATTCTCCCCAAATGTGGATGAACTGA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGTTATAGGCACTGGATaGTCTAATTCAGGTACTTTC +
Preference number: 3 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQVIGTG*SNSGTF
Trigger: GAAAGTACCTGAATTAGACAATCCAGTGCCTATAAC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGCTGCAATATATGCCTaGCAAAAGAATGCAAGACAA +
Preference number: 3 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGAAIYA*QKNARQ
Trigger: TTGTCTTGCATTCTTTTGCAAGGCATATATTGCAGC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCTGTTAACAGTAATGTaGGGTAGCAATTTGGAATGT +
Preference number: 3 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLLTVM*GSNLEC
Trigger: ACATTCCAAATTGCTACCCAACATTACTGTTAACAG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR GCA 72 bp TACCACATATGGAGATACAGTACTATTCATCAGACTTaGACTTTGAGAAGTAAACATGGTGGCTGGACATAC +
Preference number: 3 (lower is better)
Translates to: YHIWRYSTIHQT*TLRSKHGGWTY
Trigger: GTATGTCCAGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGATGAATAGTACTGTATCTCCATATGTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGTGATGAGAATAACATaGTTTTCTCCATTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGVMRIT*FSPFLH
Trigger: GTGCAGAAATGGAGAAAACAATGTTATTCTCATCAC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR TCA 72 bp ACTGTGTCAAGTAAATTTCACTTCAGAAGAATGGATTaGGGTGTAGCTTTAATCCCCCTTGTTAGGAATACA +
Preference number: 3 (lower is better)
Translates to: TVSSKFHFRRMD*GVALIPLVRNT
Trigger: TGTATTCCTAACAAGGGGGATTAAAGCTACACCTCAATCCATTCTTCTGAAGTGAAATTTACTTGACACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR GCA 72 bp AATATATGCCTTGCAAAAGAATGCAAGACAAACCAATaGCTCTCAGATGCTCAAAACCAATGTAGTATGCAT +
Preference number: 3 (lower is better)
Translates to: NICLAKECKTNQ*LSDAQNQCSMH
Trigger: ATGCATACTACATTGGTTTTGAGCATCTGAGAGGCATTGGTTTGTCTTGCATTCTTTTGCAAGGCATATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
3UTR CCA 72 bp AGGTACTTCATGATGAAATGCTCACATTACCACATATaGAGATACAGTACTATTCATCAGACTTGCACTTTG +
Preference number: 3 (lower is better)
Translates to: RYFMMKCSHYHI*RYSTIHQTCTL
Trigger: CAAAGTGCAAGTCTGATGAATAGTACTGTATCTCCATATGTGGTAATGTGAGCATTTCATCATGAAGTACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCGCGTCGTGTGCGCTTaGGCGCGCGAGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRVVCA*ARERLP
Trigger: GGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCGCTCCGCGTCGTGTaGGCTTGCGCGCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPLRVV*ACARER
Trigger: ACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCCGCTCCGCGTCGTGTaGGCTTGCGCGCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHPLRVV*ACARER
Trigger: ACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCGCGTCGTGTGCGCTTaGGCGCGCGAGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRVVCA*ARERLP
Trigger: GGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCATCCCTGGCTGGAATaGTCCCCCAGATTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLHPWLE*SPRLGG
Trigger: CCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTCAGCCCCAGTTTGCTaGGCGGGAGCAAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLSAPVC*AGARGK
Trigger: TTTACCCCTTGCTCCCGCTCAGCAAACTGGGGCTGA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCTCCTGTCTGCAGATaGATGGCTCCACCGCTTGAC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPPVCR*MAPPLD
Trigger: GTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354646.6
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCAGGAGGGGGAGGTTaGAGCAGTGAGCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPGGGG*SSEPRS
Trigger: TGATCTTGGCTCACTGCTGCAACCTCCCCCTCCTGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTGGAACCGACCCCGCTaGAATGATCCACTCATCGCT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLWNRPR*NDPLIA
Trigger: AGCGATGAGTGGATCATTTCAGCGGGGTCGGTTCCA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCTGAGTGGCTCCCATaGTGCACTAGGTCTACATGC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPEWLP*CTRSTC
Trigger: GCATGTAGACCTAGTGCAGCATGGGAGCCACTCAGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGCTGGCTGGATCCCCTaGATCAGTGGCCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLAGWIP*ISGHCN
Trigger: ATTACAATGGCCACTGATTCAGGGGATCCAGCCAGC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCAACTGGGGATGACTaGGGAGCAGATTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPTGDD*GADSLL
Trigger: CAGCAATGAATCTGCTCCTCAGTCATCCCCAGTTGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTTAGTCCCCTTCTCTaGTCGGGGACAGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFSPLL*SGTGSS
Trigger: AGAGCTTCCTGTCCCCGACCAGAGAAGGGGACTAAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTTTGGACTAGGAAGTaGATGTCGGCCAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFWTRK*MSARNR
Trigger: GCGGTTCCTGGCCGACATCCACTTCCTAGTCCAAAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCCGTGTCAGAGGAATaGGATCAGGAGCAATTGCTG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPVSEE*DQEQLL
Trigger: CAGCAATTGCTCCTGATCCCATTCCTCTGACACGGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCATCCCTGGCTGGAATaGTCCCCCAGATTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHHPWLE*SPRLGG
Trigger: CCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTCAGCCCCAGTTTGCTaGGCGGGAGCAAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSAPVC*AGARGK
Trigger: TTTACCCCTTGCTCCCGCTCAGCAAACTGGGGCTGA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGCCCATCGTTTGATTTaGGGAATAGGCTACACTGGG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLAHRLI*GIGYTG
Trigger: CCCAGTGTAGCCTATTCCTCAAATCAAACGATGGGC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGACCAGAAGTCTGAGTTaGTTCGCCAGGATGGGACAT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLTRSLS*FARMGH
Trigger: ATGTCCCATCCTGGCGAATCAACTCAGACTTCTGGT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAATGGCTCCACCGCTTaGCACAGCAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHNGSTA*HSSRIG
Trigger: GCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGGGAGGTTGCAGCAGTaGGCCAAGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHGRLQQ*AKITPL
Trigger: CAGTGGTGTGATCTTGGCTCACTGCTGCAACCTCCC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGGCTGTCAGGGTTCCTaGCCAATGTTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLGCQGS*PMFVLI
Trigger: GATCAACACAAACATTGGTCAGGAACCCTGACAGCC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTGCACTGAGAATCCCTaGGTTCTTCCAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLCTENP*VLPNSQ
Trigger: CTGGCTGTTTGGAAGAACGCAGGGATTCTCAGTGCA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAAAAAGCTGGTTGACTaGCGTAGCCTGTATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLKKLVD*RSLYAQ
Trigger: CTGGGCATACAGGCTACGGCAGTCAACCAGCTTTTT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354646.6
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCAGAATCTTCTGTGCTaGCTGGATCCCCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLQNLLC*LDPLNQ
Trigger: CTGATTCAGGGGATCCAGCCAGCACAGAAGATTCTG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGTTGATTCGCCAGGATaGGACATAAGTGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLVDSPG*DISASA
Trigger: GGCTGATGCACTTATGTCCCATCCTGGCGAATCAAC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTCCTACCCACTGTACTaGATACCCCGCCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSYPLY*IPRPRH
Trigger: GTGGCGGGGGCGGGGTATCCAGTACAGTGGGTAGGA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTCATCTTTGGGGGATaGTTCGGCAACTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLIFGG*FGNFVI
Trigger: GATGACAAAGTTGCCGAATCATCCCCCAAAGATGAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCCATAGACTTGCACTaGGAATCCCTGCGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPIDLH*ESLRSS
Trigger: GGAAGAACGCAGGGATTCTCAGTGCAAGTCTATGGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCGACCAACTGGGGATaGCTGAGGAGCAGATTCATT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPTNWG*LRSRFI
Trigger: AATGAATCTGCTCCTCAGTCATCCCCAGTTGGTCGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAATGGCTCCACCGCTTaGCACAGCAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHNGSTA*HSSRIG
Trigger: GCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTACCAGTCTTTGCCACTaGCTTTCCACTGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSTSLCH*LSTASK
Trigger: CTTGCTGGCAGTGGAAAGTCAGTGGCAAAGACTGGT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGGAGGTTGCAGCAGTaGGCCAAGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGRLQQ*AKITPL
Trigger: CAGTGGTGTGATCTTGGCTCACTGCTGCAACCTCCC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGTCACTGTATCTGCTaGGGGTATGTTCTGGACCGC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSHCIC*GYVLDR
Trigger: GCGGTCCAGAACATACCCTCAGCAGATACAGTGACT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGAGCATGACAGACCTTaGACAACTGCACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLEHDRP*TTALSS
Trigger: ACTGGAAAGTGCAGTTGTTCAAGGTCTGTCATGCTC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTCTCAGAATCTTCTGTaGTGGCTGGATCCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLSQNLL*WLDPLN
Trigger: ATTCAGGGGATCCAGCCAGCACAGAAGATTCTGAGA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTCTACTGTCAAAGTTaGAGCGACCTGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFYCQS*SDLGNS
Trigger: AGAGTTCCCCAGGTCGCTGCAACTTTGACAGTAGAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCGAACTATATTGGGGTaGTGGAGACCCTTCAACATC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLRTILG*WRPFNI
Trigger: GATGTTGAAGGGTCTCCAGCACCCCAATATAGTTCG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGGTCTACTATCTCACTaGAGGACAGTGTATACCCCA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLGLLSH*RTVYTP
Trigger: TGGGGTATACACTGTCCTGCAGTGAGATAGTAGACC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGCAATTTCAACCCATTaGCCTTTAGGCACACAGACG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLAISTH*PLGTQT
Trigger: CGTCTGTGTGCCTAAAGGGCAATGGGTTGAAATTGC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGGGTTGAAGGGTAGTTaGTTCAAGGCCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHGLKGS*FKARGL
Trigger: CAGACCCCTGGCCTTGAACCAACTACCCTTCAACCC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCCTACCCACTGTACTaGATACCCCGCCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSYPLY*IPRPRH
Trigger: GTGGCGGGGGCGGGGTATCCAGTACAGTGGGTAGGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAATGGTCCCCCAGATTaGGCGGGAATTACTACAGAT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLNGPPD*AGITTD
Trigger: ATCTGTAGTAATTCCCGCCCAATCTGGGGGACCATT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTCTCTGCTTCTTCCTTaGATCTTTGCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLSLLLP*IFAAQL
Trigger: AAGCTGAGCAGCAAAGATTCAAGGAAGAAGCAGAGA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCCCATAGACTTGCACTaGGAATCCCTGCGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHPIDLH*ESLRSS
Trigger: GGAAGAACGCAGGGATTCTCAGTGCAAGTCTATGGG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCCGACCAACTGGGGATaGCTGAGGAGCAGATTCATT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHPTNWG*LRSRFI
Trigger: AATGAATCTGCTCCTCAGTCATCCCCAGTTGGTCGG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTCTTATCGTCTGATTaGTACAGAATCGCCACCGAC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFLSSD*YRIATD
Trigger: GTCGGTGGCGATTCTGTATCAATCAGACGATAAGAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCGGTTTCTTATCGTCTaGTTGATACAGAATCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLRFLIV*LIQNRH
Trigger: GTGGCGATTCTGTATCAATCAGACGATAAGAAACCG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTTCTGATTTGGAGGTaGAAAGTGCACGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVLIWR*KVHGGM
Trigger: CATGCCACCGTGCACTTTTCACCTCCAAATCAGAAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTGGAACTGCACGAACTaGAGTAGTAGAGTAACTGGA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLWNCTN*SSRVTG
Trigger: TCCAGTTACTCTACTACTTCAGTTCGTGCAGTTCCA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTACCAGAAGTCTGAGTTaGTTCGCCAGGATGGGACAT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSTRSLS*FARMGH
Trigger: ATGTCCCATCCTGGCGAATCAACTCAGACTTCTGGT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGAGTTACCAGAAGTCTaGGTTGATTCGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSELPEV*VDSPGW
Trigger: CCATCCTGGCGAATCAACTCAGACTTCTGGTAACTC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATACCAGTCTTTGCCACTaGCTTTCCACTGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHTSLCH*LSTASK
Trigger: CTTGCTGGCAGTGGAAAGTCAGTGGCAAAGACTGGT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTGGTGTGGTAAGCACTaGTTACTCTCTGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSWCGKH*LLSGPV
Trigger: GACTGGTCCAGAGAGTAATCAGTGCTTACCACACCA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTGGAGACTGTTGGCATaGTGCTGCATTACTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSWRLLA*CCITLH
Trigger: GTGGAGAGTAATGCAGCATCATGCCAACAGTCTCCA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGGCTGTCAGGGTTCCTaGCCAATGTTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSGCQGS*PMFVLI
Trigger: GATCAACACAAACATTGGTCAGGAACCCTGACAGCC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACTCCTGTCTGCAGATaGATGGCTCCACCGCTTGAC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTPVCR*MAPPLD
Trigger: GTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGACAGAGGAGCAGTGCTaGTGTGGTTTTCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLTEEQC*CGFLCR
Trigger: TCTACAAAGAAAACCACAGCAGCACTGCTCCTCTGT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCAGATCCAGACTGCATaGTACTTCCTGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSQIQTA*YFLWLK
Trigger: CTTCAGCCACAGGAAGTAGCATGCAGTCTGGATCTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCACTGACTTTCCACTaGCAGCAAGACTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPLTFH*QQDWLK
Trigger: TTTCAGCCAGTCTTGCTGGCAGTGGAAAGTCAGTGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGACTATATTGGGGTGCTaGAGACCCTTCAACATCTCT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLTILGC*RPFNIS
Trigger: AGAGATGTTGAAGGGTCTCCAGCACCCCAATATAGT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTCAGATGACCCTGTCTaGCTACTGTTGGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSDDPV*LLLEST
Trigger: TGTGGACTCCAACAGTAGCCAGACAGGGTCATCTGA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTGCATCAGCCTGACTaGCAGTTTGGTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVHQPD*QFGDMD
Trigger: ATCCATGTCACCAAACTGCCAGTCAGGCTGATGCAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGGTTGAAGGGTAGTTaGTTCAAGGCCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGLKGS*FKARGL
Trigger: CAGACCCCTGGCCTTGAACCAACTACCCTTCAACCC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCTGGCTGGAGACTGTTaGCATGATGCTGCATTACTC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLAGDC*HDAALL
Trigger: GAGTAATGCAGCATCATGCCAACAGTCTCCAGCCAG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGCATATTCATCCCTaGCTGGAATGGTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLHIHP*LEWSPR
Trigger: TCTGGGGGACCATTCCAGCCAGGGATGAATATGCAG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGACCAGGAGGGATTGTaGCAGGATTCTGCACTGATG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHDQEGL*QDSALM
Trigger: CATCAGTGCAGAATCCTGCCACAATCCCTCCTGGTC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGGCTCCTTCATATATTaGCTGTCAGGGTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSGSFIY*LSGFLT
Trigger: GGTCAGGAACCCTGACAGCCAATATATGAAGGAGCC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTTATCTCCAGAGGTTaGTACCTGAAGGACGGTAAG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVISRG*YLKDGK
Trigger: CTTACCGTCCTTCAGGTATCAACCTCTGGAGATAAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGGATCTCCTGGGCTTaGCCTACAATAGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRISWA*PTIALN
Trigger: ATTGAGAGCTATTGTAGGTCAAGCCCAGGAGATCCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCTGTACTTGTTCAGATaGCCCTGTCTGGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLYLFR*PCLATV
Trigger: AACAGTAGCCAGACAGGGTCATCTGAACAAGTACAG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTGCTTGCTTGTTTGGTaGGTCCCTCACATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHCLLVW*VPHIQL
Trigger: CAGCTGAATGTGAGGGACTCACCAAACAAGCAAGCA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGAGTTACCAGAAGTCTaGGTTGATTCGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHELPEV*VDSPGW
Trigger: CCATCCTGGCGAATCAACTCAGACTTCTGGTAACTC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTGGAACCGACCCCGCTaGAATGATCCACTCATCGCT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQWNRPR*NDPLIA
Trigger: AGCGATGAGTGGATCATTTCAGCGGGGTCGGTTCCA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTTGCTGACTGCTGCTaGGGAATTGTAATCACCTGG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSFADCC*GIVITW
Trigger: CCAGGTGATTACAATTCCTCAGCAGCAGTCAGCAAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTGGAGACTGTTGGCATaGTGCTGCATTACTCTCCAC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHWRLLA*CCITLH
Trigger: GTGGAGAGTAATGCAGCATCATGCCAACAGTCTCCA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGATCAGACTTGCACTTTaGGAAGTAAACATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLIRLAL*EVNMVA
Trigger: AGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGAT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGACTATTTCCAGGGTaGCCTGAAGGCATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRLFPG*PEGIWF
Trigger: GAACCAAATGCCTTCAGGTCACCCTGGAAATAGTCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGAGCATGACAGACCTTaGACAACTGCACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSEHDRP*TTALSS
Trigger: ACTGGAAAGTGCAGTTGTTCAAGGTCTGTCATGCTC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGTGTGGAGAAGAGGGTaGAATTCTGCATACTTCATA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLVWRRG*NSAYFI
Trigger: TATGAAGTATGCAGAATTTCACCCTCTTCTCCACAC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCTTTAAAATTTGCCTaGACCAGCTCCTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPLKFA*TSSLRP
Trigger: AGGTCTTAAGGAGCTGGTGCAGGCAAATTTTAAAGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAACCCCTTTAAAATTTaGCTGCACCAGCTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLNPFKI*LHQLLK
Trigger: CTTAAGGAGCTGGTGCAGGCAAATTTTAAAGGGGTT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTCAACCATATAGTCTaGAATATCCTCTGGCGCATC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFNHIV*NILWRI
Trigger: GATGCGCCAGAGGATATTGCAGACTATATGGTTGAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGGATGGGACATAAGTaGATCAGCCTGACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRMGHK*ISLTGS
Trigger: ACTGCCAGTCAGGCTGATGCACTTATGTCCCATCCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGTTCAGATCCAGACTaGATGCTACTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSSDPD*MLLPVA
Trigger: AGCCACAGGAAGTAGCATGCAGTCTGGATCTGAACT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCACCAAAACGTTTCCTaGAGCAAGTTACCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSHQNVS*SKLPCL
Trigger: AAGGCAGGGTAACTTGCTGCAGGAAACGTTTTGGTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCCAGGAGGGGGAGGTTaGAGCAGTGAGCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGPGGGG*SSEPRS
Trigger: TGATCTTGGCTCACTGCTGCAACCTCCCCCTCCTGG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCAGCAATTCTCAAAATaGTGCCCTAGATGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLQQFSK*CPRCLK
Trigger: TTTGAGGCATCTAGGGCAGCATTTTGAGAATTGCTG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAATATTACAAGGCACTaGAAGAGTCTGCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLNITRH*KSLQAN
Trigger: GTTTGCCTGCAGACTCTTGCAGTGCCTTGTAATATT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGAGTGGCTCCCATGCTaGACTAGGTCTACATGCTTA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHEWLPC*TRSTCL
Trigger: TAAGCATGTAGACCTAGTGCAGCATGGGAGCCACTC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGGACTTCCTTTTGCGTaGTCATGTATTTCCATAGCA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLGLPFA*SCISIA
Trigger: TGCTATGGAAATACATGACCACGCAAAAGGAAGTCC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTGTTCAGCTCCAACTaGTTGGGATACAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLFSSN*LGYRLY
Trigger: ATAAAGCCTGTATCCCAACCAGTTGGAGCTGAACAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTTAGTCCCCTTCTCTaGTCGGGGACAGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHFSPLL*SGTGSS
Trigger: AGAGCTTCCTGTCCCCGACCAGAGAAGGGGACTAAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTCTGCAATATCCTCTaGCGCATCACCATCAACATC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVCNIL*RITINI
Trigger: GATGTTGATGGTGATGCGCCAGAGGATATTGCAGAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTCAGATGACCCTGTCTaGCTACTGTTGGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSDDPV*LLLEST
Trigger: TGTGGACTCCAACAGTAGCCAGACAGGGTCATCTGA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCTGTCTGCAGATGAATaGCTCCACCGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLSADE*LHRLTQ
Trigger: CTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACATGTGTCAAGGACTaGGGGCGGCTTCGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTCVKD*GRLRSL
Trigger: CAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGGCTGGAGACTGTTaGCATGATGCTGCATTACTC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLAGDC*HDAALL
Trigger: GAGTAATGCAGCATCATGCCAACAGTCTCCAGCCAG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTGTGGCAAGGAAGTTaGGACAGCTCCACGGATTTG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLWQGS*DSSTDL
Trigger: CAAATCCGTGGAGCTGTCCCAACTTCCTTGCCACAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCTGCATATTCATCCCTaGCTGGAATGGTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLHIHP*LEWSPR
Trigger: TCTGGGGGACCATTCCAGCCAGGGATGAATATGCAG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGAAACCTGGGGTTGTaGAACAACTGTCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGNLGL*NNCRSK
Trigger: CTTGGACCGACAGTTGTTTCACAACCCCAGGTTTCC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGAGAAGGAGGAGACTaGGTCTCACGGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHREGGD*VSRFLI
Trigger: GATAAGAAACCGTGAGACTCAGTCTCCTCCTTCTCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGGACAGTAGTGGGTTaGAGGGTAGTTGGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRTVVG*RVVGSR
Trigger: CCTTGAACCAACTACCCTTCAACCCACTACTGTCCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGGTCTTTCTCCATCTaGTTCCAGGACAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRSFSI*FQDSSG
Trigger: CCCACTACTGTCCTGGAATCAGATGGAGAAAGACCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCCGACCCCGCTGAAATaGTCCACTCATCGCTTTACA +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQPTPLK*STHRFT
Trigger: TGTAAAGCGATGAGTGGATCATTTCAGCGGGGTCGG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTATACCCCACATCTCTaGGAACCCTGTAAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHYTPHL*EPCKAS
Trigger: ACTGGCTTTACAGGGTTCTCAGAGATGTGGGGTATA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGACTATTTCCAGGGTaGCCTGAAGGCATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRLFPG*PEGIWF
Trigger: GAACCAAATGCCTTCAGGTCACCCTGGAAATAGTCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCGGTATATTTGAGCTaGATTCTGACACTCAGAATA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPVYLS*ILTLRI
Trigger: TATTCTGAGTGTCAGAATGCAGCTCAAATATACCGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTGTCTTAGGAGAACTTaGTTCAGTGTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLCLRRT*FSVHCS
Trigger: ACTACAGTGAACACTGAAGCAAGTTCTCCTAAGACA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTTAATTCGGTTGTCTaGAAACTCCAGTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFNSVV*KLQFWR
Trigger: CCTCCAAAACTGGAGTTTGCAGACAACCGAATTAAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCCACTGACTTTCCACTaGCAGCAAGACTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHPLTFH*QQDWLK
Trigger: TTTCAGCCAGTCTTGCTGGCAGTGGAAAGTCAGTGG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGATTCATCATCACTaGTCATTGGGGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLIHHH*SLGKMA
Trigger: CGCCATCTTCCCCAATGAGCAGTGATGATGAATCAG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGTGCAGTGTTCTATCTaGAAACTGCACATTTCTACA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLVQCSI*KLHIST
Trigger: TGTAGAAATGTGCAGTTTGCAGATAGAACACTGCAC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGCAATTTCAACCCATTaGCCTTTAGGCACACAGACG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHAISTH*PLGTQT
Trigger: CGTCTGTGTGCCTAAAGGGCAATGGGTTGAAATTGC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGTAACAAAATACCACTaGAAATACCTAGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLVTKYH*KYLALC
Trigger: GCACAGTGCTAGGTATTTGCAGTGGTATTTTGTTAC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCCTGAGTGGCTCCCATaGTGCACTAGGTCTACATGC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGPEWLP*CTRSTC
Trigger: GCATGTAGACCTAGTGCAGCATGGGAGCCACTCAGG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCAGTGGCTCTTTCTGTaGCAAAGTGGACATGAAGGA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHQWLFL*QSGHEG
Trigger: TCCTTCATGTCCACTTTGCCACAGAAAGAGCCACTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTTGATTCGCCAGGATaGGACATAAGTGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVDSPG*DISASA
Trigger: GGCTGATGCACTTATGTCCCATCCTGGCGAATCAAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCTGTCTGCAGATGAATaGCTCCACCGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLSADE*LHRLTQ
Trigger: CTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCACTGCCAGCAAGACTaGCTGAAAATTCACTATCAG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSHCQQD*LKIHYQ
Trigger: CTGATAGTGAATTTTCAGCCAGTCTTGCTGGCAGTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTGTGGCAAGGAAGTTaGGACAGCTCCACGGATTTG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLWQGS*DSSTDL
Trigger: CAAATCCGTGGAGCTGTCCCAACTTCCTTGCCACAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGACCAGGAGGGATTGTaGCAGGATTCTGCACTGATG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQDQEGL*QDSALM
Trigger: CATCAGTGCAGAATCCTGCCACAATCCCTCCTGGTC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGCTGAGGGTATGTTCTaGACCGCAAACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHAEGMF*TANLNL
Trigger: GAGATTGAGGTTTGCGGTCCAGAACATACCCTCAGC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGCTGGCTGGATCCCCTaGATCAGTGGCCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGAGWIP*ISGHCN
Trigger: ATTACAATGGCCACTGATTCAGGGGATCCAGCCAGC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCACTTCAGATCCCGGTaGATAATAGGAGGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHHFRSR*IIGGVL
Trigger: TAGGACTCCTCCTATTATTCACCGGGATCTGAAGTG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGCCCATCGTTTGATTTaGGGAATAGGCTACACTGGG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQAHRLI*GIGYTG
Trigger: CCCAGTGTAGCCTATTCCTCAAATCAAACGATGGGC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGCAAAATCTGCGGCTaGGTCAGCTTTGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGKICG*VSFECF
Trigger: GAAGCATTCAAAGCTGACTCAGCCGCAGATTTTGCC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGGAAACCTGGGGTTGTaGAACAACTGTCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGGNLGL*NNCRSK
Trigger: CTTGGACCGACAGTTGTTTCACAACCCCAGGTTTCC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAAGCTCTTCTCTGTTTaGTCCGATCCTGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHKLFSV*SDPVCH
Trigger: ATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCCAACTGGGGATGACTaGGGAGCAGATTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGPTGDD*GADSLL
Trigger: CAGCAATGAATCTGCTCCTCAGTCATCCCCAGTTGG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCGGTTTCTTATCGTCTaGTTGATACAGAATCGCCAC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRFLIV*LIQNRH
Trigger: GTGGCGATTCTGTATCAATCAGACGATAAGAAACCG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCACATCCTTGTGTTCTaGTTTGGAGGTGAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHHILVF*FGGEKC
Trigger: GCACTTTTCACCTCCAAATCAGAACACAAGGATGTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTGGAACTGCACGAACTaGAGTAGTAGAGTAACTGGA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHWNCTN*SSRVTG
Trigger: TCCAGTTACTCTACTACTTCAGTTCGTGCAGTTCCA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCAAGGCCAGGGGTCTaGGTGGGAATGACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSRPGV*VGMTVL
Trigger: TAAGACAGTCATTCCCACTCAGACCCCTGGCCTTGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGATATATTAGCAGGCTaGCTTGCAGCCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHDILAG*LAATLD
Trigger: GTCCAATGTGGCTGCAAGTCAGCCTGCTAATATATC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTATCAGGAGCAATTGCTaGTCTCATCTCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSIRSNC*SHLFCF
Trigger: GAAACAGAAGAGATGAGATCAGCAATTGCTCCTGAT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGATGTCATTTTTGCTaGCTGCTGCTGAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRCHFC*LLLRNC
Trigger: ACAATTCCTCAGCAGCAGTCAGCAAAAATGACATCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTGTCTCACTGAACACTaGTATGTGTTCTATTCCAAA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLCLTEH*YVFYSK
Trigger: TTTGGAATAGAACACATATCAGTGTTCAGTGAGACA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTCTCACAAGCTGCGCTaGAAGATAAGAAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSHKLR*KIRSCH
Trigger: GTGACAACTTCTTATCTTTCAGCGCAGCTTGTGAGA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTGGCGAATAGAAGAGTaGACTCTGTGTTTGAGCATA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSWRIEE*TLCLSI
Trigger: TATGCTCAAACACAGAGTTCACTCTTCTATTCGCCA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCTTGGTCGACGTGGTaGTGCAGGTGGCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSWSTW*CRWQRN
Trigger: ATTCCTTTGCCACCTGCATCACCACGTCGACCAAGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAGGAGACAGCTGCTTTaGATTATTACTGAAATCGTA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLRRQLL*IITEIV
Trigger: TACGATTTCAGTAATAATTCAAAGCAGCTGTCTCCT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTCTGGGGTTCTAAAATaGTATATCCCATCAAACTGT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLSGVLK*YIPSNC
Trigger: ACAGTTTGATGGGATATATCATTTTAGAACCCCAGA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAGTCACTGTATCTGCTaGGGGTATGTTCTGGACCGC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSHCIC*GYVLDR
Trigger: GCGGTCCAGAACATACCCTCAGCAGATACAGTGACT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTCCTTGAATCTTTGCTaGTCAGCTTTGGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLSLNLC*SALVNF
Trigger: AAAGTTAACCAAAGCTGAGCAGCAAAGATTCAAGGA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGAGGAGTCCTAGTGTaGAAGAACTGCAACCCCTTT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGGVLV*KNCNPF
Trigger: AAAGGGGTTGCAGTTCTTGCACACTAGGACTCCTCC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTGCACTGAGAATCCCTaGGTTCTTCCAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQCTENP*VLPNSQ
Trigger: CTGGCTGTTTGGAAGAACGCAGGGATTCTCAGTGCA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAGGATGGGACATAAGTaGATCAGCCTGACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQRMGHK*ISLTGS
Trigger: ACTGCCAGTCAGGCTGATGCACTTATGTCCCATCCT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAGGCTTTTGATCAAATaGCAGAGTTGTAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLRLLIK*QSCKRV
Trigger: AACTCTCTTACAACTCTGGCATTTGATCAAAAGCCT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTGAGAAATAAACTCTaGATCCATAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLRNKL*IHSWLL
Trigger: CAGCAGCCAGCTATGGATGCAGAGTTTATTTCTCAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGAAGTTGGAAATGCCTaGATATTCATCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHEVGNA*IFIPGW
Trigger: CCAGCCAGGGATGAATATGCAGGCATTTCCAACTTC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAAGGCTTCATCCTACTaGTGTGATGACGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHKASSY*CDDGKS
Trigger: TGATTTCCCGTCATCACAGCAGTAGGATGAAGCCTT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTTCAATTATTCTTCTaGTCTCCACCCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSFQLFF*SPPPNP
Trigger: GGGATTTGGGGGTGGAGAGCAGAAGAATAATTGAAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCAGACCTTGAACAACTaGACTTTCCAGTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSQTLNN*TFQLVT
Trigger: AGTGACTAACTGGAAAGTGCAGTTGTTCAAGGTCTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTGGAATCACTTTCATaGAAGAACCCAGACTTGACC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLESLS*KNPDLT
Trigger: GGTCAAGTCTGGGTTCTTCCATGAAAGTGATTCCAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTCTTGTCTTCTTTATTaGCGTCACCCGGTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSCLLY*RHPVSN
Trigger: ATTAGAGACCGGGTGACGCCAATAAAGAAGACAAGA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGGAATAGGCTACACTaGGCTGACTTGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRNRLH*ADLKYL
Trigger: CAGATACTTCAAGTCAGCCCAGTGTAGCCTATTCCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGTTAATGGGGAAACCTaGGGTTGTGAAACAACTGTC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHVNGET*GCETTV
Trigger: GACAGTTGTTTCACAACCCCAGGTTTCCCCATTAAC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTGTTCAGCTCCAACTaGTTGGGATACAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLFSSN*LGYRLY
Trigger: ATAAAGCCTGTATCCCAACCAGTTGGAGCTGAACAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTTGCCATTTCCACTTaGGTTATCAGGGCTACTGAC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHFAIST*VIRATD
Trigger: GTCAGTAGCCCTGATAACCCAAGTGGAAATGGCAAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCAGTGGCTCTTTCTGTaGCAAAGTGGACATGAAGGA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHQWLFL*QSGHEG
Trigger: TCCTTCATGTCCACTTTGCCACAGAAAGAGCCACTG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTTTGGACTAGGAAGTaGATGTCGGCCAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGFWTRK*MSARNR
Trigger: GCGGTTCCTGGCCGACATCCACTTCCTAGTCCAAAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTGATAAAGTATAGCTaGCTGCTTGGTTTCTACACT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLIKYS*LLGFYT
Trigger: AGTGTAGAAACCAAGCAGCCAGCTATACTTTATCAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGCAGAGGAAGAAAATaGAGAGTCTATGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSRGRK*RVYALG
Trigger: ACCCAAAGCATAGACTCTCCATTTTCTTCCTCTGCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGTAAACACAATTCGCTaGGTACAGAAGTTATCACAT +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLVNTIR*VQKLSH
Trigger: ATGTGATAACTTCTGTACCCAGCGAATTGTGTTTAC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCCCGTGTCAGAGGAATaGGATCAGGAGCAATTGCTG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGPVSEE*DQEQLL
Trigger: CAGCAATTGCTCCTGATCCCATTCCTCTGACACGGG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCACTGCCAGCAAGACTaGCTGAAAATTCACTATCAG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHHCQQD*LKIHYQ
Trigger: CTGATAGTGAATTTTCAGCCAGTCTTGCTGGCAGTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTATCATCACTGCTCATTaGGGAAGATGGCGAATAGAA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSIITAH*GRWRIE
Trigger: TTCTATTCGCCATCTTCCCCAATGAGCAGTGATGAT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACATGTGTCAAGGACTaGGGGCGGCTTCGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGTCVKD*GRLRSL
Trigger: CAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATACAGCTCCACGGATTTaGGACAGAGAAGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHTAPRI*DREEIH
Trigger: ATGGATTTCTTCTCTGTCCCAAATCCGTGGAGCTGT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGATATTCATCCCTGGCTaGAATGGTCCCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQIFIPG*NGPPDW
Trigger: CCAATCTGGGGGACCATTCCAGCCAGGGATGAATAT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGATCCCATAAGACTCTaGCTGATGGAGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQDPIRL*LMEGLS
Trigger: ACTGAGACCCTCCATCAGCCAGAGTCTTATGGGATC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGATGATGAATTATATGTaGAATAGAGGTGGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLMMNYM*NRGGGQ
Trigger: TTGGCCACCACCTCTATTCCACATATAATTCATCAT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGAAACAAGGAACATCTaGTTACAAACATTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLETRNI*LQTFAE
Trigger: CTCAGCAAATGTTTGTAACCAGATGTTCCTTGTTTC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGCTCCTTCATATATTaGCTGTCAGGGTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGSFIY*LSGFLT
Trigger: GGTCAGGAACCCTGACAGCCAATATATGAAGGAGCC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCATAAACTTCCTGAGTaGCTCCCATGCTGCACTAGG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQHKLPE*LPCCTR
Trigger: CCTAGTGCAGCATGGGAGCCACTCAGGAAGTTTATG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACTCTCCACACACAGTaGATCTGTAGCAACTATGCC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTLHTQ*ICSNYA
Trigger: GGCATAGTTGCTACAGATCCACTGTGTGTGGAGAGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTACCTCTCAACACATTTaGAGGAAGCTTATCTACTCT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSTSQHI*RKLIYS
Trigger: AGAGTAGATAAGCTTCCTTCAAATGTGTTGAGAGGT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTCTCTGCTTCTTCCTTaGATCTTTGCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSLLLP*IFAAQL
Trigger: AAGCTGAGCAGCAAAGATTCAAGGAAGAAGCAGAGA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCACTTCAGATCCCGGTaGATAATAGGAGGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQHFRSR*IIGGVL
Trigger: TAGGACTCCTCCTATTATTCACCGGGATCTGAAGTG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGGCAAAATCTGCGGCTaGGTCAGCTTTGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGGKICG*VSFECF
Trigger: GAAGCATTCAAAGCTGACTCAGCCGCAGATTTTGCC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGATCTGTGGGACCTTCTaGACAGTTAATGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQICGTF*TVNGET
Trigger: GGTTTCCCCATTAACTGTTCAGAAGGTCCCACAGAT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTAGTTGCCACATCTTaGTTCAAGCTTCGAACTAAA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVVATS*FKLRTK
Trigger: TTTAGTTCGAAGCTTGAATCAAGATGTGGCAACTAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAAGCTCTTCTCTGTTTaGTCCGATCCTGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHKLFSV*SDPVCH
Trigger: ATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGTTATCTCCAGAGGTTaGTACCTGAAGGACGGTAAG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQVISRG*YLKDGK
Trigger: CTTACCGTCCTTCAGGTATCAACCTCTGGAGATAAC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTGTGTGTCTCCAGCTaGCACTCTACCATGTTATCT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLCVSS*HSTMLS
Trigger: AGATAACATGGTAGAGTGTCAGCTGGAGACACACAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAGGATCTCCTGGGCTTaGCCTACAATAGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQRISWA*PTIALN
Trigger: ATTGAGAGCTATTGTAGGTCAAGCCCAGGAGATCCT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGTTCTGATTTGGAGGTaGAAAGTGCACGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGVLIWR*KVHGGM
Trigger: CATGCCACCGTGCACTTTTCACCTCCAAATCAGAAC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTGCTTGCTTGTTTGGTaGGTCCCTCACATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGCLLVW*VPHIQL
Trigger: CAGCTGAATGTGAGGGACTCACCAAACAAGCAAGCA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAGGACAGTAGTGGGTTaGAGGGTAGTTGGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGRTVVG*RVVGSR
Trigger: CCTTGAACCAACTACCCTTCAACCCACTACTGTCCT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAGGTCTTTCTCCATCTaGTTCCAGGACAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGRSFSI*FQDSSG
Trigger: CCCACTACTGTCCTGGAATCAGATGGAGAAAGACCT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGATATATTAGCAGGCTaGCTTGCAGCCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQDILAG*LAATLD
Trigger: GTCCAATGTGGCTGCAAGTCAGCCTGCTAATATATC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGTCCCTTTTGAACACTaGTATATTAGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHVPFEH*YISRLT
Trigger: AGTCAGCCTGCTAATATATCAGTGTTCAAAAGGGAC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGATGTCATTTTTGCTaGCTGCTGCTGAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRCHFC*LLLRNC
Trigger: ACAATTCCTCAGCAGCAGTCAGCAAAAATGACATCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGCCAGCAAGACTGGCTaGAAATTCACTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQASKTG*KFTIRA
Trigger: AGCTCTGATAGTGAATTTTCAGCCAGTCTTGCTGGC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTGGTGTGGTAAGCACTaGTTACTCTCTGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGWCGKH*LLSGPV
Trigger: GACTGGTCCAGAGAGTAATCAGTGCTTACCACACCA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTCGAAGTTTGCTTTTaGAAGATCTTGGTCGACGTG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHFEVCF*KILVDV
Trigger: CACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGAAGAAATCCATGTTaGTGTGTAGCCCATAGTAGA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRRNPC*CVAHSR
Trigger: TCTACTATGGGCTACACATCAACATGGATTTCTTCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTGTTGTGTTGTTCCTaGAATTCCTACCCACTGTAC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLLCCS*NSYPLY
Trigger: GTACAGTGGGTAGGAATTTCAGGAACAACACAACAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTACCCTGCCTTCTGTaGAAGGTAAACCTAAGACAA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLPCLL*KVNLRQ
Trigger: TTGTCTTAGGTTTACCTTTCACAGAAGGCAGGGTAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCAAAGGTGTACATTTTaGCATTGCCTCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGQRCTF*HCLPSS
Trigger: GGAGGAGGGGAGGCAATGTCAAAATGTACACCTTTG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATATCAGACTTGCACTTTaGGAAGTAAACATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHIRLAL*EVNMVA
Trigger: AGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGAT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTCTTCCTTGAATCTTTaGTGCTCAGCTTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSSLNL*CSALVN
Trigger: GTTAACCAAAGCTGAGCAGCAAAGATTCAAGGAAGA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCGAACTATATTGGGGTaGTGGAGACCCTTCAACATC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQRTILG*WRPFNI
Trigger: GATGTTGAAGGGTCTCCAGCACCCCAATATAGTTCG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAACCCCTTTAAAATTTaGCTGCACCAGCTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHNPFKI*LHQLLK
Trigger: CTTAAGGAGCTGGTGCAGGCAAATTTTAAAGGGGTT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCTAGTGTGCAAGAACTaGAACCCCTTTAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLVCKN*NPFKIC
Trigger: GCAAATTTTAAAGGGGTTGCAGTTCTTGCACACTAG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGGAGGAGTCCTAGTGTaGAAGAACTGCAACCCCTTT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGGGVLV*KNCNPF
Trigger: AAAGGGGTTGCAGTTCTTGCACACTAGGACTCCTCC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCGGTATATTTGAGCTaGATTCTGACACTCAGAATA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPVYLS*ILTLRI
Trigger: TATTCTGAGTGTCAGAATGCAGCTCAAATATACCGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACAGAGGAGCAGTGCTaGTGTGGTTTTCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTEEQC*CGFLCR
Trigger: TCTACAAAGAAAACCACAGCAGCACTGCTCCTCTGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTTTTCCTTCGTAGTTaGCACATCTTGATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVFLRS*HILIQA
Trigger: AGCTTGAATCAAGATGTGGCAACTACGAAGGAAAAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGATTAGCAGGCTGACTTaGAGCCACATTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQISRLT*SHIGQK
Trigger: CTTCTGTCCAATGTGGCTGCAAGTCAGCCTGCTAAT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCAGATCCAGACTGCATaGTACTTCCTGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGQIQTA*YFLWLK
Trigger: CTTCAGCCACAGGAAGTAGCATGCAGTCTGGATCTG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAGTTCAGATCCAGACTaGATGCTACTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSSDPD*MLLPVA
Trigger: AGCCACAGGAAGTAGCATGCAGTCTGGATCTGAACT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAAGAGAATTTCCTACTaGTTCCTTTGTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSKRISY*FLCPVI
Trigger: GATGACTGGACAAAGGAAGCAGTAGGAAATTCTCTT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAAAAACATTTCTGTGTaGAGTGTTCTATCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLKNISV*SVLSAN
Trigger: GTTTGCAGATAGAACACTGCACACAGAAATGTTTTT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAACAGCAGCAGTATCTaGAGAATCAAGGAACTGTTA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSNSSSI*RIKELL
Trigger: TAACAGTTCCTTGATTCTGCAGATACTGCTGCTGTT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGGTAGTGTTTACTTGTaGACCCAAAACAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHGSVYL*TQNSTE
Trigger: TTCAGTGCTGTTTTGGGTGCACAAGTAAACACTACC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTTCAATTATTCTTCTaGTCTCCACCCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHFQLFF*SPPPNP
Trigger: GGGATTTGGGGGTGGAGAGCAGAAGAATAATTGAAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCAGACCTTGAACAACTaGACTTTCCAGTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHQTLNN*TFQLVT
Trigger: AGTGACTAACTGGAAAGTGCAGTTGTTCAAGGTCTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGAGTGGCTCCCATGCTaGACTAGGTCTACATGCTTA +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGEWLPC*TRSTCL
Trigger: TAAGCATGTAGACCTAGTGCAGCATGGGAGCCACTC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACTATATTGGGGTGCTaGAGACCCTTCAACATCTCT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTILGC*RPFNIS
Trigger: AGAGATGTTGAAGGGTCTCCAGCACCCCAATATAGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTCTTCATACATCTCTaGAGCCATAAACTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSFFIHL*SHKLRS
Trigger: ACTCCTGAGTTTATGGCTCCAGAGATGTATGAAGAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGGAATAGGCTACACTaGGCTGACTTGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRNRLH*ADLKYL
Trigger: CAGATACTTCAAGTCAGCCCAGTGTAGCCTATTCCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTCAGCTCCAACTGGTTaGGATACAGGCTTTATCTGT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSAPTG*DTGFIC
Trigger: ACAGATAAAGCCTGTATCCCAACCAGTTGGAGCTGA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGTCTGCAATATCCTCTaGCGCATCACCATCAACATC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQVCNIL*RITINI
Trigger: GATGTTGATGGTGATGCGCCAGAGGATATTGCAGAC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAAGTGCACGGTGGCATaGATTATTTTCTATAGTGAG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSKCTVA*IIFYSE
Trigger: CTCACTATAGAAAATAATCCATGCCACCGTGCACTT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGGAACTATTAGTAACTaGTGCCATTATCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSGTISN*CHYLPV
Trigger: AACAGGCAGATAATGGCACCAGTTACTAATAGTTCC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATGACTTCTGTCACTaGACAGGAGAGGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHYDFCH*TGEGIF
Trigger: GAAGATACCCTCTCCTGTCCAGTGACAGAAGTCATA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTAGAGCCTGTCTGTTaGAAATTAGGGGATTGTACA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLEPVC*KLGDCT
Trigger: TGTACAATCCCCTAATTTCCAACAGACAGGCTCTAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATATCATCACTGCTCATTaGGGAAGATGGCGAATAGAA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHIITAH*GRWRIE
Trigger: TTCTATTCGCCATCTTCCCCAATGAGCAGTGATGAT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGACTTTACAAGCAGGATaGTTAAGTACAACCATTTTC +
Preference number: 4 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLTLQAG*LSTTIF
Trigger: GAAAATGGTTGTACTTAACCATCCTGCTTGTAAAGT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCAGAATAGGAGCTATTaGTTTGTACACTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHQNRSY*FVHSSS
Trigger: GCTAGACGAGTGTACAAACCAATAGCTCCTATTCTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGCTGAGGGTATGTTCTaGACCGCAAACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGAEGMF*TANLNL
Trigger: GAGATTGAGGTTTGCGGTCCAGAACATACCCTCAGC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGAAGAACCCAGACTTaGCCATTTCATATGCTACTT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGRTQT*PFHMLL
Trigger: AAGTAGCATATGAAATGGTCAAGTCTGGGTTCTTCC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCATCTGTGGGACCTTCTaGACAGTTAATGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGICGTF*TVNGET
Trigger: GGTTTCCCCATTAACTGTTCAGAAGGTCCCACAGAT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGTAGTTGCCACATCTTaGTTCAAGCTTCGAACTAAA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHVVATS*FKLRTK
Trigger: TTTAGTTCGAAGCTTGAATCAAGATGTGGCAACTAC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTGTGTGTCTCCAGCTaGCACTCTACCATGTTATCT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLCVSS*HSTMLS
Trigger: AGATAACATGGTAGAGTGTCAGCTGGAGACACACAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCTGTACTTGTTCAGATaGCCCTGTCTGGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLYLFR*PCLATV
Trigger: AACAGTAGCCAGACAGGGTCATCTGAACAAGTACAG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTCTTATCGTCTGATTaGTACAGAATCGCCACCGAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQFLSSD*YRIATD
Trigger: GTCGGTGGCGATTCTGTATCAATCAGACGATAAGAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTCCCTTTTGAACACTaGTATATTAGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVPFEH*YISRLT
Trigger: AGTCAGCCTGCTAATATATCAGTGTTCAAAAGGGAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTTGCTGACTGCTGCTaGGGAATTGTAATCACCTGG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGFADCC*GIVITW
Trigger: CCAGGTGATTACAATTCCTCAGCAGCAGTCAGCAAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAATGGTTTGTCTCACTaGACACTGATATGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSNGLSH*TLICVL
Trigger: TAGAACACATATCAGTGTTCAGTGAGACAAACCATT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTCTTTACAGGTTTCCTaGAGAGCTTGTAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSLQVS*RACNFS
Trigger: TGAGAAGTTACAAGCTCTTCAGGAAACCTGTAAAGA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTCTCACAAGCTGCGCTaGAAGATAAGAAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSHKLR*KIRSCH
Trigger: GTGACAACTTCTTATCTTTCAGCGCAGCTTGTGAGA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGCCAGCAAGACTGGCTaGAAATTCACTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGASKTG*KFTIRA
Trigger: AGCTCTGATAGTGAATTTTCAGCCAGTCTTGCTGGC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTTTCTCGTAATCTTTaGAGCTCCACCTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHFSRNL*SSTFKS
Trigger: GGACTTGAAGGTGGAGCTTCAAAGATTACGAGAAAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGATTTACCACCTCCTaGATGTGTTTTTCTCGTAAT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRFTTS*MCFSRN
Trigger: ATTACGAGAAAAACACATTCAGGAGGTGGTAAATCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTTTGCTATCTTTAATTaGCCGAAGGCGTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHFAIFN*PKAFIE
Trigger: CTCTATGAACGCCTTCGGTCAATTAAAGATAGCAAA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGAAGAAATCCATGTTaGTGTGTAGCCCATAGTAGA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRRNPC*CVAHSR
Trigger: TCTACTATGGGCTACACATCAACATGGATTTCTTCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGACAAACATGTGAAGTaGAGATCCCATAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHDKHVK*RSHKTL
Trigger: CAGAGTCTTATGGGATCTTCACTTCACATGTTTGTC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTAGGTTTCACAGACTaGGCATTAGGTAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLGFTD*ALGNPV
Trigger: CACAGGGTTACCTAATGCTCAGTCTGTGAAACCTAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTCTGGGGTTCTAAAATaGTATATCCCATCAAACTGT +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSGVLK*YIPSNC
Trigger: ACAGTTTGATGGGATATATCATTTTAGAACCCCAGA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTGTGGAGAAGAGGGTaGAATTCTGCATACTTCATA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVWRRG*NSAYFI
Trigger: TATGAAGTATGCAGAATTTCACCCTCTTCTCCACAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTCTACTGTCAAAGTTaGAGCGACCTGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGFYCQS*SDLGNS
Trigger: AGAGTTCCCCAGGTCGCTGCAACTTTGACAGTAGAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCCTTTAAAATTTGCCTaGACCAGCTCCTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHPLKFA*TSSLRP
Trigger: AGGTCTTAAGGAGCTGGTGCAGGCAAATTTTAAAGG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTGACCATTTCATATaGTACTTCCTCAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHLDHFI*YFLRCI
Trigger: GATACACCTGAGGAAGTAGCATATGAAATGGTCAAG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTTGGAGGTGAAAAGTaGACGGTGGCATGGATTATT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHFGGEK*TVAWII
Trigger: AATAATCCATGCCACCGTGCACTTTTCACCTCCAAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGGTATGAATATGCTTaGTTGTTTGGTGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRYEYA*LFGESL
Trigger: GAGGGACTCACCAAACAAGCAAGCATATTCATACCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCATTAGCAGGCTGACTTaGAGCCACATTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGISRLT*SHIGQK
Trigger: CTTCTGTCCAATGTGGCTGCAAGTCAGCCTGCTAAT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATATTGTGGCAGGATTCTaGACTGATGAAGTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHIVAGF*TDEVGN
Trigger: ATTTCCAACTTCATCAGTGCAGAATCCTGCCACAAT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCACCAAAACGTTTCCTaGAGCAAGTTACCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGHQNVS*SKLPCL
Trigger: AAGGCAGGGTAACTTGCTGCAGGAAACGTTTTGGTG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGTAGTGTTTACTTGTaGACCCAAAACAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGSVYL*TQNSTE
Trigger: TTCAGTGCTGTTTTGGGTGCACAAGTAAACACTACC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAAAGTTGCAGCGACCTaGGGAACTCTGTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHKVAAT*GTLFSN
Trigger: ATTTGAAAACAGAGTTCCCCAGGTCGCTGCAACTTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAAAATCGAACTATATTaGGGTGCTGGAGACCCTTCA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHKIELY*GAGDPS
Trigger: TGAAGGGTCTCCAGCACCCCAATATAGTTCGATTTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGGTACGCATTAAGGTaGCTAATCCTAGATCACCAA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRYALR*LILDHQ
Trigger: TTGGTGATCTAGGATTAGCCACCTTAATGCGTACCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTTATTGAAGCTGGCTaGTTTTATGCCACTAGTTAC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSFIEAG*FYATSY
Trigger: GTAACTAGTGGCATAAAACCAGCCAGCTTCAATAAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGTTAATGGGGAAACCTaGGGTTGTGAAACAACTGTC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQVNGET*GCETTV
Trigger: GACAGTTGTTTCACAACCCCAGGTTTCCCCATTAAC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAAGTGCACGGTGGCATaGATTATTTTCTATAGTGAG +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHKCTVA*IIFYSE
Trigger: CTCACTATAGAAAATAATCCATGCCACCGTGCACTT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGGAACTATTAGTAACTaGTGCCATTATCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHGTISN*CHYLPV
Trigger: AACAGGCAGATAATGGCACCAGTTACTAATAGTTCC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAATGGTCCCCCAGATTaGGCGGGAATTACTACAGAT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGNGPPD*AGITTD
Trigger: ATCTGTAGTAATTCCCGCCCAATCTGGGGGACCATT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTACCTGGCAAGCCCATaGGGTATAATTTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHYLASP*GIIFRR
Trigger: TCTTCTAAAAATTATACCCCATGGGCTTGCCAGGTA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACCTCTCAACACATTTaGAGGAAGCTTATCTACTCT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTSQHI*RKLIYS
Trigger: AGAGTAGATAAGCTTCCTTCAAATGTGTTGAGAGGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCACATCCTTGTGTTCTaGTTTGGAGGTGAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGHILVF*FGGEKC
Trigger: GCACTTTTCACCTCCAAATCAGAACACAAGGATGTG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACATGGATACACAGGTATaGATATGCTTGCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHMDTQV*ICLLVW
Trigger: CCAAACAAGCAAGCATATTCATACCTGTGTATCCAT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGGACTTTTGATCTCTTaGAAAAGCTGGTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGGLLIS*KSWLTA
Trigger: GGCAGTCAACCAGCTTTTTCAAGAGATCAAAAGTCC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354646.6
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGATCAGGAGCAATTGCTaGTCTCATCTCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQIRSNC*SHLFCF
Trigger: GAAACAGAAGAGATGAGATCAGCAATTGCTCCTGAT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTCTTTACAGGTTTCCTaGAGAGCTTGTAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSLQVS*RACNFS
Trigger: TGAGAAGTTACAAGCTCTTCAGGAAACCTGTAAAGA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCTTTTCTGGGGTCACTaGAGATACATCAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLFWGH*RYISLT
Trigger: TGTGAGACTGATGTATCTTCAGTGACCCCAGAAAAG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCTCATCCTCTATTTCTaGTTCATCATCACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLILYF*FIITAH
Trigger: ATGAGCAGTGATGATGAATCAGAAATAGAGGATGAG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTTTCTCGTAATCTTTaGAGCTCCACCTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQFSRNL*SSTFKS
Trigger: GGACTTGAAGGTGGAGCTTCAAAGATTACGAGAAAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGATTTACCACCTCCTaGATGTGTTTTTCTCGTAAT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRFTTS*MCFSRN
Trigger: ATTACGAGAAAAACACATTCAGGAGGTGGTAAATCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTGTTGTGTTGTTCCTaGAATTCCTACCCACTGTAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLLCCS*NSYPLY
Trigger: GTACAGTGGGTAGGAATTTCAGGAACAACACAACAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTCTTCCCTTCTTGCTTaGCTTTTAACCTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSSLLA*LLTLFE
Trigger: TTCAAACAAGGTTAAAAGTCAAGCAAGAAGGGAAGA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAATTATAGCTTTAGGTaGTTGAGCATGACAGACCTT +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHNYSFR*LSMTDL
Trigger: AAGGTCTGTCATGCTCAATCACCTAAAGCTATAATT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACCCTTCAACATCTCTaGTTCTTCCTTGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTLQHL*FFLESL
Trigger: CAAAGATTCAAGGAAGAAGCAGAGATGTTGAAGGGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCTAGTGTGCAAGAACTaGAACCCCTTTAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLVCKN*NPFKIC
Trigger: GCAAATTTTAAAGGGGTTGCAGTTCTTGCACACTAG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCTTGACCATTTCATATaGTACTTCCTCAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLDHFI*YFLRCI
Trigger: GATACACCTGAGGAAGTAGCATATGAAATGGTCAAG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTTTTCCTTCGTAGTTaGCACATCTTGATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVFLRS*HILIQA
Trigger: AGCTTGAATCAAGATGTGGCAACTACGAAGGAAAAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACATTGTGGCAGGATTCTaGACTGATGAAGTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHIVAGF*TDEVGN
Trigger: ATTTCCAACTTCATCAGTGCAGAATCCTGCCACAAT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCAATTCTCAAAATGCTaGCCTAGATGCCTCAAATTA +
Preference number: 4 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHQFSKC*PRCLKL
Trigger: TAATTTGAGGCATCTAGGGCAGCATTTTGAGAATTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTACTTCATGATGAAATaGTCACATTACCACATATGG +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSYFMMK*SHYHIW
Trigger: CCATATGTGGTAATGTGAGCATTTCATCATGAAGTA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTAACAAAATACCACTaGAAATACCTAGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVTKYH*KYLALC
Trigger: GCACAGTGCTAGGTATTTGCAGTGGTATTTTGTTAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTCAGAATTATCAGAATaGACTTCCTTTTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSELSE*TSFCVV
Trigger: GACCACGCAAAAGGAAGTCCATTCTGATAATTCTGA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTCTTCATACATCTCTaGAGCCATAAACTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHFFIHL*SHKLRS
Trigger: ACTCCTGAGTTTATGGCTCCAGAGATGTATGAAGAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTCTTGTCTTCTTTATTaGCGTCACCCGGTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSCLLY*RHPVSN
Trigger: ATTAGAGACCGGGTGACGCCAATAAAGAAGACAAGA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCAGCTCCAACTGGTTaGGATACAGGCTTTATCTGT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSAPTG*DTGFIC
Trigger: ACAGATAAAGCCTGTATCCCAACCAGTTGGAGCTGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGCAGTTTGGTGACATaGATACACAGGTATGAATAT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGSLVT*IHRYEY
Trigger: ATATTCATACCTGTGTATCCATGTCACCAAACTGCC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAGCAGAGGAAGAAAATaGAGAGTCTATGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSRGRK*RVYALG
Trigger: ACCCAAAGCATAGACTCTCCATTTTCTTCCTCTGCT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTAGAGCCTGTCTGTTaGAAATTAGGGGATTGTACA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLEPVC*KLGDCT
Trigger: TGTACAATCCCCTAATTTCCAACAGACAGGCTCTAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCTTCTCAACAATTCATaGAAAGTGTCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLLNNS*KVSWKW
Trigger: CCATTTCCAGGACACTTTCCATGAATTGTTGAGAAG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTACTTTACAAGCAGGATaGTTAAGTACAACCATTTTC +
Preference number: 4 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSTLQAG*LSTTIF
Trigger: GAAAATGGTTGTACTTAACCATCCTGCTTGTAAAGT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAGTAAACATGGTGGCTaGACATACAGACTATCCTCT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSKHGG*TYRLSS
Trigger: AGAGGATAGTCTGTATGTCCAGCCACCATGTTTACT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCAGAATAGGAGCTATTaGTTTGTACACTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQQNRSY*FVHSSS
Trigger: GCTAGACGAGTGTACAAACCAATAGCTCCTATTCTG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTCTTTAATTCCACAGTaGCTGATGGCTATGACTTCT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSLIPQ*LMAMTS
Trigger: AGAAGTCATAGCCATCAGTCACTGTGGAATTAAAGA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCACTTGACGGACTTTTaGTCTCTTGAAAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGHLTDF*SLEKAG
Trigger: ACCAGCTTTTTCAAGAGATCAAAAGTCCGTCAAGTG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354646.6
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTTGCTATCTTTAATTaGCCGAAGGCGTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQFAIFN*PKAFIE
Trigger: CTCTATGAACGCCTTCGGTCAATTAAAGATAGCAAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTCGAAGTTTGCTTTTaGAAGATCTTGGTCGACGTG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGFEVCF*KILVDV
Trigger: CACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTCAGAAGAATGGATTaGGGTGTAGCTTTAATCCCC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGFRRMD*GVALIP
Trigger: GGGGATTAAAGCTACACCTCAATCCATTCTTCTGAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGGTTTCATATTCTTATaGTGTTACACCCAACTTCAC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHGFIFL*CYTQLH
Trigger: GTGAAGTTGGGTGTAACATCATAAGAATATGAAACC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTACACAGTAAACATGTaGAACAAGGAACATCTGGTT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHYTVNM*NKEHLV
Trigger: AACCAGATGTTCCTTGTTTCACATGTTTACTGTGTA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTCTTCCCTTCTTGCTTaGCTTTTAACCTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSSLLA*LLTLFE
Trigger: TTCAAACAAGGTTAAAAGTCAAGCAAGAAGGGAAGA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGACCCTTCAACATCTCTaGTTCTTCCTTGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQTLQHL*FFLESL
Trigger: CAAAGATTCAAGGAAGAAGCAGAGATGTTGAAGGGT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACATTTACTTCAGCCTaGGGGATATTAGAAACCATT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTFTSA*GILETI
Trigger: AATGGTTTCTAATATCCCGCAGGCTGAAGTAAATGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTCAACCATATAGTCTaGAATATCCTCTGGCGCATC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGFNHIV*NILWRI
Trigger: GATGCGCCAGAGGATATTGCAGACTATATGGTTGAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACTATTAGTAACTGGTaGCATTATCTGCCTGTTATC +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTISNW*HYLPVI
Trigger: GATAACAGGCAGATAATGGCACCAGTTACTAATAGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGGCTTTTGATCAAATaGCAGAGTTGTAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRLLIK*QSCKRV
Trigger: AACTCTCTTACAACTCTGGCATTTGATCAAAAGCCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAAGAGAATTTCCTACTaGTTCCTTTGTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQKRISY*FLCPVI
Trigger: GATGACTGGACAAAGGAAGCAGTAGGAAATTCTCTT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACATCAGCTGCAATATATaGCTTGCAAAAGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHISCNI*LAKECK
Trigger: CTTGCATTCTTTTGCAAGGCATATATTGCAGCTGAT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAATATTACAAGGCACTaGAAGAGTCTGCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGNITRH*KSLQAN
Trigger: GTTTGCCTGCAGACTCTTGCAGTGCCTTGTAATATT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAAAATCGAACTATATTaGGGTGCTGGAGACCCTTCA +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGKIELY*GAGDPS
Trigger: TGAAGGGTCTCCAGCACCCCAATATAGTTCGATTTT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTGGAATCACTTTCATaGAAGAACCCAGACTTGACC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLESLS*KNPDLT
Trigger: GGTCAAGTCTGGGTTCTTCCATGAAAGTGATTCCAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTGATAAAGTATAGCTaGCTGCTTGGTTTCTACACT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLIKYS*LLGFYT
Trigger: AGTGTAGAAACCAAGCAGCCAGCTATACTTTATCAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTAAACACAATTCGCTaGGTACAGAAGTTATCACAT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVNTIR*VQKLSH
Trigger: ATGTGATAACTTCTGTACCCAGCGAATTGTGTTTAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTACCTGGCAAGCCCATaGGGTATAATTTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQYLASP*GIIFRR
Trigger: TCTTCTAAAAATTATACCCCATGGGCTTGCCAGGTA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGAAACAAGGAACATCTaGTTACAAACATTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHETRNI*LQTFAE
Trigger: CTCAGCAAATGTTTGTAACCAGATGTTCCTTGTTTC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCCTAAGACAAACATGTaGAGTGAAGATCCCATAAGA +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGPKTNM*SEDPIR
Trigger: TCTTATGGGATCTTCACTTCACATGTTTGTCTTAGG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGTTTCATATTCTTATaGTGTTACACCCAACTTCAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGFIFL*CYTQLH
Trigger: GTGAAGTTGGGTGTAACATCATAAGAATATGAAACC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTACACAGTAAACATGTaGAACAAGGAACATCTGGTT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQYTVNM*NKEHLV
Trigger: AACCAGATGTTCCTTGTTTCACATGTTTACTGTGTA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR TCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAATTATAGCTTTAGGTaGTTGAGCATGACAGACCTT +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQNYSFR*LSMTDL
Trigger: AAGGTCTGTCATGCTCAATCACCTAAAGCTATAATT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCTTCCTTGAATCTTTaGTGCTCAGCTTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSSLNL*CSALVN
Trigger: GTTAACCAAAGCTGAGCAGCAAAGATTCAAGGAAGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTGTCTTAGGAGAACTTaGTTCAGTGTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGCLRRT*FSVHCS
Trigger: ACTACAGTGAACACTGAAGCAAGTTCTCCTAAGACA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACATATGGAAAACAGTaGAATGCAAGCATTTGCATT +
Preference number: 4 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTYGKQ*NASICI
Trigger: AATGCAAATGCTTGCATTGCACTGTTTTCCATATGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCAGAATTATCAGAATaGACTTCCTTTTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSELSE*TSFCVV
Trigger: GACCACGCAAAAGGAAGTCCATTCTGATAATTCTGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTTATTGAAGCTGGCTaGTTTTATGCCACTAGTTAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQFIEAG*FYATSY
Trigger: GTAACTAGTGGCATAAAACCAGCCAGCTTCAATAAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGTGAAAAGTGCACGGTaGCATGGATTATTTTCTATA +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQVKSAR*HGLFSI
Trigger: TATAGAAAATAATCCATGCCACCGTGCACTTTTCAC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGGCAGTTTGGTGACATaGATACACAGGTATGAATAT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGGSLVT*IHRYEY
Trigger: ATATTCATACCTGTGTATCCATGTCACCAAACTGCC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCTTCTCAACAATTCATaGAAAGTGTCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLLNNS*KVSWKW
Trigger: CCATTTCCAGGACACTTTCCATGAATTGTTGAGAAG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCCTTGAATCTTTGCTaGTCAGCTTTGGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSLNLC*SALVNF
Trigger: AAAGTTAACCAAAGCTGAGCAGCAAAGATTCAAGGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACTATTAGTAACTGGTaGCATTATCTGCCTGTTATC +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGTISNW*HYLPVI
Trigger: GATAACAGGCAGATAATGGCACCAGTTACTAATAGT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAAAAACATTTCTGTGTaGAGTGTTCTATCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQKNISV*SVLSAN
Trigger: GTTTGCAGATAGAACACTGCACACAGAAATGTTTTT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTACTTCATGATGAAATaGTCACATTACCACATATGG +
Preference number: 4 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQYFMMK*SHYHIW
Trigger: CCATATGTGGTAATGTGAGCATTTCATCATGAAGTA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGTGAAAAGTGCACGGTaGCATGGATTATTTTCTATA +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGVKSAR*HGLFSI
Trigger: TATAGAAAATAATCCATGCCACCGTGCACTTTTCAC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR GCA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACATATGGAAAACAGTaGAATGCAAGCATTTGCATT +
Preference number: 4 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGTYGKQ*NASICI
Trigger: AATGCAAATGCTTGCATTGCACTGTTTTCCATATGT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 90 bp CTCCTCTCCTCGATGTCTCGAGCTCCGCTCCGCGTCGTGTGCGCTTaGGCGCGCGAGCGTCTCCCCGCGAGCCCACCGGGCCAGCTACGG +
Preference number: 5 (lower is better)
Translates to: LLSSMSRAPLRVVCA*ARERLPASPPGQLR
Trigger: CCGTAGCTGGCCCGGTGGGCTCGCGGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGGAGCTCGAGACATCGAGGAGAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 90 bp TTCTTACTCCTCTCCTCGATGTCTCGAGCTCCGCTCCGCGTCGTGTaGGCTTGCGCGCGCGAGCGTCTCCCCGCGAGCCCACCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: FLLLSSMSRAPLRVV*ACARERLPASPPGQ
Trigger: CTGGCCCGGTGGGCTCGCGGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGGAGCTCGAGACATCGAGGAGAGGAGTAAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCGCGTCGTGTGCGCTaGCGCGCGCGAGCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPRRVR*RARASP
Trigger: GGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 90 bp AGACACATACACACACACCGCCTCCTCCTCGATCGCCTCCTCCGATaGTTCTTACTCCTCTCCTCGATGTCTCGAGCTCCGCTCCGCGTC +
Preference number: 5 (lower is better)
Translates to: RHIHTHRLLLDRLLR*FLLLSSMSRAPLRV
Trigger: GACGCGGAGCGGAGCTCGAGACATCGAGGAGAGGAGTAAGAAGCATCGGAGGAGGCGATCGAGGAGGAGGCGGTGTGTGTGTATGTGTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCCGCGTCGTGTGCGCTaGCGCGCGCGAGCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQPRRVR*RARASP
Trigger: GGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 90 bp CTGCCGGCTTTGGGATTAGAAGTCGAAGCACCGATTTACAAATACTaGCCTCCCAGTTACGTTGCGGGGGCAACAGCCACGGCATGTCTC +
Preference number: 5 (lower is better)
Translates to: LPALGLEVEAPIYKY*PPSYVAGATATACL
Trigger: GAGACATGCCGTGGCTGTTGCCCCCGCAACGTAACTGGGAGGCCAGTATTTGTAAATCGGTGCTTCGACTTCTAATCCCAAAGCCGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458404.1
CDS GCA 90 bp GGAGGGATTGTGGCAGGATTCTGCACTGATGAAGTTGGAAATGCCTaGATATTCATCCCTGGCTGGAATGGTCCCCCAGATTGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: GGIVAGFCTDEVGNA*IFIPGWNGPPDWAG
Trigger: TCCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATGAATATGCAGGCATTTCCAACTTCATCAGTGCAGAATCCTGCCACAATCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGAGCAAGGGGTAAAGTaGTATTCTGGGGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLEQGVK*YSGAEG
Trigger: TCCCTCAGCCCCAGAATACAACTTTACCCCTTGCTC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGAATGGCTCCACCGCTaGACACAGCAGCAGGATAGG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSEWLHR*TQQQDR
Trigger: CCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTTGTGGCAAGGAAGTaGGGACAGCTCCACGGATTT +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLVARK*GQLHGF
Trigger: AAATCCGTGGAGCTGTCCCAACTTCCTTGCCACAAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS TCA 90 bp TGTCCACATGTGTCAAGGACTGGGGGCGGCTTCGAAGTTTGCTTTTaGAAGATCTTGGTCGACGTGGTGATGCAGGTGGCAAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: CPHVSRTGGGFEVCF*KILVDVVMQVAKES
Trigger: AGATTCCTTTGCCACCTGCATCACCACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACACATTCAGCCCCAGTTaGCTGAGCGGGAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHTFSPS*LSGSKG
Trigger: CCCCTTGCTCCCGCTCAGCAAACTGGGGCTGAATGT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCTGCCTCAGACAAATaGTCACCTGTAACAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPASDK*SPVTEE
Trigger: CTCCTCTGTTACAGGTGACAATTTGTCTGAGGCAGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGAATGGCTCCACCGCTaGACACAGCAGCAGGATAGG +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHEWLHR*TQQQDR
Trigger: CCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTCCTACTGCTTCCTTaGTCCAGTCATCCACCAGCT +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLFLLLP*SSHPPA
Trigger: AGCTGGTGGATGACTGGACAAAGGAAGCAGTAGGAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGACAGCTCCACGGATTaGGGACAGAGAAGAAATCCA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLDSSTD*GQRRNP
Trigger: TGGATTTCTTCTCTGTCCCAAATCCGTGGAGCTGTC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCAAAGGTGTACATTTaGACATTGCCTCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPKVYI*TLPPLL
Trigger: GAGGAGGGGAGGCAATGTCAAAATGTACACCTTTGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGACATTCAGCCCCAGTTaGCTGAGCGGGAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQTFSPS*LSGSKG
Trigger: CCCCTTGCTCCCGCTCAGCAAACTGGGGCTGAATGT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTGAAGGTGACCATCTaGTTGTTGTGTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLKVTI*LLCVSS
Trigger: GCTGGAGACACACAACAACAAGATGGTCACCTTCAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCTGTCTGGCTACTGTaGGAGTCCACAGTAATAGAA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPVWLL*ESTVIE
Trigger: TTCTATTACTGTGGACTCCAACAGTAGCCAGACAGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGCCTGACTGGCAGTTaGGTGACATGGATACACAGG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSLTGS*VTWIHR
Trigger: CCTGTGTATCCATGTCACCAAACTGCCAGTCAGGCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCTTGTGGCAAGGAAGTaGGGACAGCTCCACGGATTT +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLVARK*GQLHGF
Trigger: AAATCCGTGGAGCTGTCCCAACTTCCTTGCCACAAG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 90 bp AGTGGATCTGTAGCAACTATGCCATTGTCCACATGTGTCAAGGACTaGGGGCGGCTTCGAAGTTTGCTTTTGAAAGATCTTGGTCGACGT +
Preference number: 5 (lower is better)
Translates to: SGSVATMPLSTCVKD*GRLRSLLLKDLGRR
Trigger: ACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGTGGACAATGGCATAGTTGCTACAGATCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGAGCAAGGGGTAAAGTaGTATTCTGGGGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHEQGVK*YSGAEG
Trigger: TCCCTCAGCCCCAGAATACAACTTTACCCCTTGCTC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGCGGCTGAGTCAGCTTaGAATGCTTCTGTAACCCTG +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHAAESA*NASVTL
Trigger: CAGGGTTACAGAAGCATTCAAAGCTGACTCAGCCGC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGCCTGACTGGCAGTTaGGTGACATGGATACACAGG +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSLTGS*VTWIHR
Trigger: CCTGTGTATCCATGTCACCAAACTGCCAGTCAGGCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCAGGACAGTAGTGGGTaGAAGGGTAGTTGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSQDSSG*KGSWFK
Trigger: CTTGAACCAACTACCCTTCAACCCACTACTGTCCTG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTTAGAGCCTGTCTGTaGGAAATTAGGGGATTGTAC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLRACL*EIRGLY
Trigger: GTACAATCCCCTAATTTCCAACAGACAGGCTCTAAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTCTCTGGACCAGTCTTaGCCACTGACTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSLDQS*PLTFHC
Trigger: GCAGTGGAAAGTCAGTGGCAAAGACTGGTCCAGAGA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGAATGGTCCCCCAGATaGGGCGGGAATTACTACAGA +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHEWSPR*GGNYYR
Trigger: TCTGTAGTAATTCCCGCCCAATCTGGGGGACCATTC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGGCTCCTTCATATATaGGCTGTCAGGGTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRLLHI*AVRVPD
Trigger: GTCAGGAACCCTGACAGCCAATATATGAAGGAGCCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 90 bp CTGACTGGCAGTTTGGTGACATGGATACACAGGTATGAATATGCTTaGTTGTTTGGTGAGTCCCTCACATTCAGCTGGAACTGCACGAAC +
Preference number: 5 (lower is better)
Translates to: LTGSLVTWIHRYEYA*LFGESLTFSWNCTN
Trigger: GTTCGTGCAGTTCCAGCTGAATGTGAGGGACTCACCAAACAAGCAAGCATATTCATACCTGTGTATCCATGTCACCAAACTGCCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 90 bp TCTACTCTGATTCATTTAGGACCAGGAGGGATTGTGGCAGGATTCTaGACTGATGAAGTTGGAAATGCCTGCATATTCATCCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: STLIHLGPGGIVAGF*TDEVGNACIFIPGW
Trigger: CCAGCCAGGGATGAATATGCAGGCATTTCCAACTTCATCAGTGCAGAATCCTGCCACAATCCCTCCTGGTCCTAAATGAATCAGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 90 bp GGAAGCTCTTCTCTGTTTGATCCGATCCTGTTTGCCATTTCCACTTaGGTTATCAGGGCTACTGACGTTTTCCTTCGTAGTTGCCACATC +
Preference number: 5 (lower is better)
Translates to: GSSSLFDPILFAIST*VIRATDVFLRSCHI
Trigger: GATGTGGCAACTACGAAGGAAAACGTCAGTAGCCCTGATAACCCAAGTGGAAATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 90 bp AGGATGGGACATAAGTGCATCAGCCTGACTGGCAGTTTGGTGACATaGATACACAGGTATGAATATGCTTGCTTGTTTGGTGAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RMGHKCISLTGSLVT*IHRYEYACLFGESL
Trigger: GAGGGACTCACCAAACAAGCAAGCATATTCATACCTGTGTATCCATGTCACCAAACTGCCAGTCAGGCTGATGCACTTATGTCCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 90 bp GGAAATGCCTGCATATTCATCCCTGGCTGGAATGGTCCCCCAGATTaGGCGGGAATTACTACAGATTGTTGTGTTGTTCCTGAAATTCCT +
Preference number: 5 (lower is better)
Translates to: GNACIFIPGWNGPPD*AGITTDCCVVPEIP
Trigger: AGGAATTTCAGGAACAACACAACAATCTGTAGTAATTCCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATGAATATGCAGGCATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 90 bp TTCTGCACTGATGAAGTTGGAAATGCCTGCATATTCATCCCTGGCTaGAATGGTCCCCCAGATTGGGCGGGAATTACTACAGATTGTTGT +
Preference number: 5 (lower is better)
Translates to: FCTDEVGNACIFIPG*NGPPDWAGITTDCC
Trigger: ACAACAATCTGTAGTAATTCCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATGAATATGCAGGCATTTCCAACTTCATCAGTGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 90 bp GATTTACCTGTAGCAACTATGCCATTGTCCACATGTGTCAAGGACTaGGGGCGGCTTCGAAGTTTGCTTTTGAAAGATCTTGGTCGACGT +
Preference number: 5 (lower is better)
Translates to: DLPVATMPLSTCVKD*GRLRSLLLKDLGRR
Trigger: ACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGTGGACAATGGCATAGTTGCTACAGGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620763.1
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAGAATGGACTTCCTTTaGCGTGGTCATGTATTTCCA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLRMDFL*RGHVFP
Trigger: TGGAAATACATGACCACGCAAAAGGAAGTCCATTCT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGATGATTCGGCAACTTaGTCATCTTCCGTCATTTCA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLDDSAT*SSSVIS
Trigger: TGAAATGACGGAAGATGACAAAGTTGCCGAATCATC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTAATTCTCTCATCTTaGGGGGATGATTCGGCAACT +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLILSS*GDDSAT
Trigger: AGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCCTGCCTCAGACAAATaGTCACCTGTAACAGAGGAG +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHPASDK*SPVTEE
Trigger: CTCCTCTGTTACAGGTGACAATTTGTCTGAGGCAGG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGCCCATCGTTTGATTaGAGGAATAGGCTACACTGG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSSPSFD*RNRLHW
Trigger: CCAGTGTAGCCTATTCCTCAAATCAAACGATGGGCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTCAGCTCCAACTGGTaGGGATACAGGCTTTATCTG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSFSSNW*GYRLYL
Trigger: CAGATAAAGCCTGTATCCCAACCAGTTGGAGCTGAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCCTGTTATCTTCCACTaGATAAAGTATAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLPVIFH*IKYSWL
Trigger: CAGCCAGCTATACTTTATCAAGTGGAAGATAACAGG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGAATATGCTTGCTTGTTaGGTGAGTCCCTCACATTCA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLNMLAC*VSPSHS
Trigger: TGAATGTGAGGGACTCACCAAACAAGCAAGCATATT...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTACCAGAAGTCTGAGTaGATTCGCCAGGATGGGACA +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHYQKSE*IRQDGT
Trigger: TGTCCCATCCTGGCGAATCAACTCAGACTTCTGGTA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCAAAAGATGTCATTTTaGCTGACTGCTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLQKMSF*LTAAEE
Trigger: TTCCTCAGCAGCAGTCAGCAAAAATGACATCTTTTG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTTCGAAGTTTGCTTTaGAAAGATCTTGGTCGACGT +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLRSLL*KDLGRR
Trigger: ACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGGGCGGCTTCGAAGTTaGCTTTTGAAAGATCTTGGT +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSGRLRS*LLKDLG
Trigger: ACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTACAGATTGTTGTGTaGTTCCTGAAATTCCTACCC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLQIVV*FLKFLP
Trigger: GGGTAGGAATTTCAGGAACAACACAACAATCTGTAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGAATGGTCCCCCAGATaGGGCGGGAATTACTACAGA +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHEWSPR*GGNYYR
Trigger: TCTGTAGTAATTCCCGCCCAATCTGGGGGACCATTC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTCTGCACTGATGAAGTaGGAAATGCCTGCATATTCA +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLSALMK*EMPAYS
Trigger: TGAATATGCAGGCATTTCCAACTTCATCAGTGCAGA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCACAAGGTTAGGAGTTaGAGACCAGTCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHHKVRS*RPVWPT
Trigger: TGTTGGCCAGACTGGTCTCAAACTCCTAACCTTGTG...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGGCTCCTTCATATATaGGCTGTCAGGGTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHRLLHI*AVRVPD
Trigger: GTCAGGAACCCTGACAGCCAATATATGAAGGAGCCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS TCA 90 bp TTGATCAAATGCCAGAGTTGTAAGAGAGTTACCAGAAGTCTGAGTTaGTTCGCCAGGATGGGACATAAGTGCATCAGCCTGACTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LIKCQSCKRVTRSLS*FARMGHKCISLTGS
Trigger: ACTGCCAGTCAGGCTGATGCACTTATGTCCCATCCTGGCGAATCAACTCAGACTTCTGGTAACTCTCTTACAACTCTGGCATTTGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 90 bp TTCTGTCACTGGACAGGAGAGGGTATCTTCAGCAGAGGAAGAAAATaGAGAGTCTATGCTTTGGGTATCCTTCTGACTCTCGGGATAGAT +
Preference number: 5 (lower is better)
Translates to: FCHWTGEGIFSRGRK*RVYALGILLTLGID
Trigger: ATCTATCCCGAGAGTCAGAAGGATACCCAAAGCATAGACTCTCCATTTTCTTCCTCTGCTGAAGATACCCTCTCCTGTCCAGTGACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTATCTCTGCTTCTTCCTaGAATCTTTGCTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSISASS*NLCCSA
Trigger: AGCTGAGCAGCAAAGATTCAAGGAAGAAGCAGAGAT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATGAAGCTCTTCTCTGTTaGATCCGATCCTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHEALLC*IRSCLP
Trigger: TGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTC...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCAGGACAGTAGTGGGTaGAAGGGTAGTTGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHQDSSG*KGSWFK
Trigger: CTTGAACCAACTACCCTTCAACCCACTACTGTCCTG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGCCCAGCTTTTTAATTaGCGAGTCCAGGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSAQLFN*RVQDFL
Trigger: CAAGAAATCCTGGACTCGCAAATTAAAAAGCTGGGC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354646.6
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCGAAGTTTTTGGATTTaGTGTGGCAGGTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLRSFWI*CGRFYF
Trigger: GAAATAGAACCTGCCACACAAAATCCAAAAACTTCG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTGAAAGATAAGAAGTaGTCACCTTGTTTGGGAACT +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLKDKK*SPCLGT
Trigger: AGTTCCCAAACAAGGTGACAACTTCTTATCTTTCAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTCTCTGGACCAGTCTTaGCCACTGACTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSLDQS*PLTFHC
Trigger: GCAGTGGAAAGTCAGTGGCAAAGACTGGTCCAGAGA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTCCTACTGCTTCCTTaGTCCAGTCATCCACCAGCT +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHFLLLP*SSHPPA
Trigger: AGCTGGTGGATGACTGGACAAAGGAAGCAGTAGGAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGACAGCTCCACGGATTaGGGACAGAGAAGAAATCCA +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHDSSTD*GQRRNP
Trigger: TGGATTTCTTCTCTGTCCCAAATCCGTGGAGCTGTC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGGTTATAGGCACTGGATaGTCTAATTCAGGTACTTTC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLVIGTG*SNSGTF
Trigger: GAAAGTACCTGAATTAGACAATCCAGTGCCTATAAC...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 90 bp GCTATCTTTAATTCCACAGTGACTGATGGCTATGACTTCTGTCACTaGACAGGAGAGGGTATCTTCAGCAGAGGAAGAAAATGGAGAGTC +
Preference number: 5 (lower is better)
Translates to: AIFNSTVTDGYDFCH*TGEGIFSRGRKWRV
Trigger: GACTCTCCATTTTCTTCCTCTGCTGAAGATACCCTCTCCTGTCCAGTGACAGAAGTCATAGCCATCAGTCACTGTGGAATTAAAGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAGAATGGACTTCCTTTaGCGTGGTCATGTATTTCCA +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSRMDFL*RGHVFP
Trigger: TGGAAATACATGACCACGCAAAAGGAAGTCCATTCT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCTTTGCTGCTCAGCTTaGGTTAACTTTCGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLCCSA*VNFRSC
Trigger: GCAGGACCGAAAGTTAACCAAAGCTGAGCAGCAAAG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATATCTCTGCTTCTTCCTaGAATCTTTGCTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHISASS*NLCCSA
Trigger: AGCTGAGCAGCAAAGATTCAAGGAAGAAGCAGAGAT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGGATCAGTGACTTTATaGAAGCTGGCTGGTTTTATG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSGSVTL*KLAGFM
Trigger: CATAAAACCAGCCAGCTTCAATAAAGTCACTGATCC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTGTTGTCTAACATGTaGATCAACTTCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLLSNM*INFSFF
Trigger: GAAGAAACTGAAGTTGATCAACATGTTAGACAACAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGCCCATCGTTTGATTaGAGGAATAGGCTACACTGG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSPSFD*RNRLHW
Trigger: CCAGTGTAGCCTATTCCTCAAATCAAACGATGGGCT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGCGGCTGAGTCAGCTTaGAATGCTTCTGTAACCCTG +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGAAESA*NASVTL
Trigger: CAGGGTTACAGAAGCATTCAAAGCTGACTCAGCCGC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCATCAACATCAAACTaGAAGGTGACCATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPSTSN*KVTILL
Trigger: CAACAAGATGGTCACCTTCAAGTTTGATGTTGATGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAAGGATCTCCTGGGCTaGACCTACAATAGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHKDLLG*TYNSSQ
Trigger: TTGAGAGCTATTGTAGGTCAAGCCCAGGAGATCCTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCCTGTCTGGCTACTGTaGGAGTCCACAGTAATAGAA +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHPVWLL*ESTVIE
Trigger: TTCTATTACTGTGGACTCCAACAGTAGCCAGACAGG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGTATAGCTGGCTGCTaGGTTTCTACACTAGCACAT +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSIAGC*VSTLAH
Trigger: ATGTGCTAGTGTAGAAACCAAGCAGCCAGCTATACT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCTGTTATCTTCCACTaGATAAAGTATAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPVIFH*IKYSWL
Trigger: CAGCCAGCTATACTTTATCAAGTGGAAGATAACAGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGTTGGAAATTAGGGGATaGTACAGGGCTATCTTTAAT +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLEIRG*YRAIFN
Trigger: ATTAAAGATAGCCCTGTACAATCCCCTAATTTCCAA...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCTTCGAAGTTTGCTTTaGAAAGATCTTGGTCGACGT +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLRSLL*KDLGRR
Trigger: ACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTAGCAACTATGCCATaGTCCACATGTGTCAAGGAC +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVATMP*STCVKD
Trigger: GTCCTTGACACATGTGGACAATGGCATAGTTGCTAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GGGTCTACTATCTCACTGCAGGACAGTGTATACCCCACATCTCTGAGAACCCTGCTGTTAACAGTAATGTaGGGTAGCAATTTGGAATGT +
Preference number: 5 (lower is better)
Translates to: GSTISLQDSVYPTSLRTLLLTVM*GSNLEC
Trigger: ACATTCCAAATTGCTACCCAACATTACTGTTAACAG...CAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATACAGGTAGTGTTTACTaGTGCACCCAAAACAGCACT +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHTGSVY*CTQNST
Trigger: AGTGCTGTTTTGGGTGCACAAGTAAACACTACCTGT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS TCA 90 bp TTCTACTGTCAAAGTTGCAGCGACCTGGGGAACTCTGTTTTCAAATaGAATTCCATCAGGTTTCTCAGAATCTTCTGTGCTGGCTGGATC +
Preference number: 5 (lower is better)
Translates to: FYCQSCSDLGNSVFK*NSIRFLRIFCAGWI
Trigger: GATCCAGCCAGCACAGAAGATTCTGAGAAACCTGATGGAATTTCATTTGAAAACAGAGTTCCCCAGGTCGCTGCAACTTTGACAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS TCA 90 bp TGTTGGAAATTAGGGGATTGTACAGGGCTATCTTTAATTCCACAGTaGCTGATGGCTATGACTTCTGTCACTGGACAGGAGAGGGTATCT +
Preference number: 5 (lower is better)
Translates to: CWKLGDCTGLSLIPQ*LMAMTSVTGQERVS
Trigger: AGATACCCTCTCCTGTCCAGTGACAGAAGTCATAGCCATCAGTCACTGTGGAATTAAAGATAGCCCTGTACAATCCCCTAATTTCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 90 bp TTCGCTGGGTACAGAAGTTATCACATTCAGGTCCCTTTTGAACACTaGTATATTAGCAGGCTGACTTGCAGCCACATTGGACAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: FAGYRSYHIQVPFEH*YISRLTCSHIGQKL
Trigger: AAGCTTCTGTCCAATGTGGCTGCAAGTCAGCCTGCTAATATATCAGTGTTCAAAAGGGACCTGAATGTGATAACTTCTGTACCCAGCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 90 bp GCTGGCTGGTTTTATGCCACTAGTTACTTTCCGGTATATTTGAGCTaGATTCTGACACTCAGAATAAGGATACTCCGATGTGGCCATTTC +
Preference number: 5 (lower is better)
Translates to: AGWFYATSYFPVYLS*ILTLRIRILRCGHF
Trigger: GAAATGGCCACATCGGAGTATCCTTATTCTGAGTGTCAGAATGCAGCTCAAATATACCGGAAAGTAACTAGTGGCATAAAACCAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 90 bp TTCAAGGCCAGGGGTCTGAGTGGGAATGACTGTCTTAGGAGAACTTaGTTCAGTGTTCACTGTAGTTTCTCCTTCTTGAGAAATAAACTC +
Preference number: 5 (lower is better)
Translates to: FKARGLSGNDCLRRT*FSVHCSFSFLRNKL
Trigger: GAGTTTATTTCTCAAGAAGGAGAAACTACAGTGAACACTGAAGCAAGTTCTCCTAAGACAGTCATTCCCACTCAGACCCCTGGCCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 90 bp GCTCCACCTTCAAGTCCTCATCCTCTATTTCTGATTCATCATCACTaGTCATTGGGGAAGATGGCGAATAGAAGAGTGAACTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: APPSSPHPLFLIHHH*SLGKMANRRVNSVF
Trigger: AAACACAGAGTTCACTCTTCTATTCGCCATCTTCCCCAATGAGCAGTGATGATGAATCAGAAATAGAGGATGAGGACTTGAAGGTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCTTTGCTGCTCAGCTTaGGTTAACTTTCGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLCCSA*VNFRSC
Trigger: GCAGGACCGAAAGTTAACCAAAGCTGAGCAGCAAAG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTCCTTCAATGATTTCTTaGACTTCAGGATCAGTGACT +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSPSMIS*TSGSVT
Trigger: AGTCACTGATCCTGAAGTCAAAGAAATCATTGAAGG...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTAAGCAAGGGATGAATTaGAGCAATCATCTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSKQGMN*SNHLLL
Trigger: CAGAAGAAGATGATTGCTCAAATTCATCCCTTGCTT...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATTGGAAGAACCCAGACTaGACCATTTCATATGCTACT +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHWKNPD*TISYAT
Trigger: AGTAGCATATGAAATGGTCAAGTCTGGGTTCTTCCA...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAACAGTGGACTGACCTaGAACCAAAGGCAAAATCTG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHNSGLT*NQRQNL
Trigger: CAGATTTTGCCTTTGGTTCAAGGTCAGTCCACTGTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTCAGCTCCAACTGGTaGGGATACAGGCTTTATCTG +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQFSSNW*GYRLYL
Trigger: CAGATAAAGCCTGTATCCCAACCAGTTGGAGCTGAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGAAGCTCTTCTCTGTTaGATCCGATCCTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQEALLC*IRSCLP
Trigger: TGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTGAAGGTGACCATCTaGTTGTTGTGTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLKVTI*LLCVSS
Trigger: GCTGGAGACACACAACAACAAGATGGTCACCTTCAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAGTATAGCTGGCTGCTaGGTTTCTACACTAGCACAT +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHSIAGC*VSTLAH
Trigger: ATGTGCTAGTGTAGAAACCAAGCAGCCAGCTATACT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTACCAGAAGTCTGAGTaGATTCGCCAGGATGGGACA +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGYQKSE*IRQDGT
Trigger: TGTCCCATCCTGGCGAATCAACTCAGACTTCTGGTA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTGGAGAGTCTATGCTTaGGGTATCCTTCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQWRVYA*GILLTL
Trigger: GAGAGTCAGAAGGATACCCAAAGCATAGACTCTCCA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCTTATTCTGCTGGGTTaGAAGATTTACCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLILLG*KIYHLL
Trigger: CAGGAGGTGGTAAATCTTCAAACCCAGCAGAATAAG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGGGCGGCTTCGAAGTTaGCTTTTGAAAGATCTTGGT +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQGRLRS*LLKDLG
Trigger: ACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGCTGCAATATATGCCTaGCAAAAGAATGCAAGACAA +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSAAIYA*QKNARQ
Trigger: TTGTCTTGCATTCTTTTGCAAGGCATATATTGCAGC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCCAGTAAAGTGCAACTaGACAGTGATCTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHPVKCN*TVISLR
Trigger: TCTGAGAGAGATCACTGTCAAGTTGCACTTTACTGG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATAGCGACAGAATCTTCTaGATAATGGATGTGATCCTC +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHSDRIF*IMDVIL
Trigger: GAGGATCACATCCATTATCAAGAAGATTCTGTCGCT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTGTTATAGGCACTGGATaGTCTAATTCAGGTACTTTC +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSVIGTG*SNSGTF
Trigger: GAAAGTACCTGAATTAGACAATCCAGTGCCTATAAC...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAGCAATTTCAACCCATaGCCCTTTAGGCACACAGAC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQSNFNP*PFRHTD
Trigger: GTCTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp ATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATATAGGAGCTATTGGTTaGTACACTCGTCTAGCTATC +
Preference number: 5 (lower is better)
Translates to: MITRLLQSAWRQQYTIHHIGAIG*YTRLAI
Trigger: GATAGCTAGACGAGTGTACAAACCAATAGCTCCTAT...ATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 90 bp CCAGTTACATCTCAGGTATCAGAATTATCAGAATGGACTTCCTTTTaGGTGGTCATGTATTTCCATAGCAACCAGATTAGAGGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: PVTSQVSELSEWTSF*VVMYFHSNQIRGSR
Trigger: GCGAGAGCCTCTAATCTGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCTGAGATGTAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 90 bp CCAGTTACATCTCAGGTATCAGAATTATCAGAATGGACTTCCTTTTaGGTGGTCATGTATTTCCATAGCAACCTGCCGGCTTTGGGATTA +
Preference number: 5 (lower is better)
Translates to: PVTSQVSELSEWTSF*VVMYFHSNLPALGL
Trigger: TAATCCCAAAGCCGGCAGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCTGAGATGTAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458404.1
CDS CCA 90 bp CTACTCTTCAGTCCAGTTACATCTCAGGTATCAGAATTATCAGAATaGACTTCCTTTTGCGTGGTCATGTATTTCCATAGCAACCTGCCG +
Preference number: 5 (lower is better)
Translates to: LLFSPVTSQVSELSE*TSFCVVMYFHSNLP
Trigger: CGGCAGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCTGAGATGTAACTGGACTGAAGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458404.1
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTTAATTCTCTCATCTTaGGGGGATGATTCGGCAACT +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHLILSS*GDDSAT
Trigger: AGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCACCTCTCAACACATTaGAAGGAAGCTTATCTACTC +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHHLSTH*KEAYLL
Trigger: GAGTAGATAAGCTTCCTTCAAATGTGTTGAGAGGTG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTGAGATTTCTGAGGTaGACTTTGAACACTGTTCAT +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLRFLR*TLNTVH
Trigger: ATGAACAGTGTTCAAAGTCAACCTCAGAAATCTCAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTACTTTCCGGTATATTaGAGCTGCATTCTGACACTC +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHYFPVY*SCILTL
Trigger: GAGTGTCAGAATGCAGCTCAAATATACCGGAAAGTA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTGATCCGATCCTGTTaGCCATTTCCACTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLIRSC*PFPLGL
Trigger: TAACCCAAGTGGAAATGGCAAACAGGATCGGATCAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCCATCAACATCAAACTaGAAGGTGACCATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHPSTSN*KVTILL
Trigger: CAACAAGATGGTCACCTTCAAGTTTGATGTTGATGG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAAGGATCTCCTGGGCTaGACCTACAATAGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGKDLLG*TYNSSQ
Trigger: TTGAGAGCTATTGTAGGTCAAGCCCAGGAGATCCTT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATGAATATGCTTGCTaGTTTGGTGAGTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHYEYAC*FGESLT
Trigger: TGTGAGGGACTCACCAAACAAGCAAGCATATTCATA...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTGGAGAGTCTATGCTTaGGGTATCCTTCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGWRVYA*GILLTL
Trigger: GAGAGTCAGAAGGATACCCAAAGCATAGACTCTCCA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCGGACTTTTGATCTCTaGAAAAAGCTGGTTGACTGC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQRTFDL*KKLVDC
Trigger: GCAGTCAACCAGCTTTTTCAAGAGATCAAAAGTCCG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354646.6
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGTAGCAACTATGCCATaGTCCACATGTGTCAAGGAC +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGVATMP*STCVKD
Trigger: GTCCTTGACACATGTGGACAATGGCATAGTTGCTAC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGTGTACATTTTGACATaGCCTCCCCTCCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQVYILT*PPLLLK
Trigger: TTTTAGGAGGAGGGGAGGCAATGTCAAAATGTACAC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAGCAATTTCAACCCATaGCCCTTTAGGCACACAGAC +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSNFNP*PFRHTD
Trigger: GTCTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCCATTGCTGAAGGATTaGTCAAATATTTCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHPLLKD*SNISLW
Trigger: CCACAGCGAAATATTTGACAAATCCTTCAGCAATGG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACTATTCACCATCTTTGAATGATAGGCCATaGCTGAAGGATTTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: DNPVTAVSMETAVHYSPSLNDRP*LKDLSN
Trigger: ATTTGACAAATCCTTCAGCAATGGCCTATCATTCAA...AGATGGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS TCA 90 bp GTCTTAGGAGAACTTGCTTCAGTGTTCACTGTAGTTTCTCCTTCTTaGGAAATAAACTCTGCATCCATAGCTGGCTGCTGTACTGATAAG +
Preference number: 5 (lower is better)
Translates to: VLGELASVFTVVSPS*EINSASIAGCCTDK
Trigger: CTTATCAGTACAGCAGCCAGCTATGGATGCAGAGTTTATTTCTCAAGAAGGAGAAACTACAGTGAACACTGAAGCAAGTTCTCCTAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 90 bp CCTTTTCTGGGGTCACTGAAGATACATCAGTCTCACAAGCTGCGCTaGAAGATAAGAAGTTGTCACCTTGTTTGGGAACTCCTTTATTTT +
Preference number: 5 (lower is better)
Translates to: PFLGSLKIHQSHKLR*KIRSCHLVWELLYF
Trigger: AAAATAAAGGAGTTCCCAAACAAGGTGACAACTTCTTATCTTTCAGCGCAGCTTGTGAGACTGATGTATCTTCAGTGACCCCAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 90 bp AGTTGGGACAGCTCCACGGATTTGGGACAGAGAAGAAATCCATGTTaGTGTGTAGCCCATAGTAGACGGAGTATTTTCAGATACTTTATT +
Preference number: 5 (lower is better)
Translates to: SWDSSTDLGQRRNPC*CVAHSRRSIFRYFI
Trigger: AATAAAGTATCTGAAAATACTCCGTCTACTATGGGCTACACATCAACATGGATTTCTTCTCTGTCCCAAATCCGTGGAGCTGTCCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 90 bp ATAGGAGGAGTCCTAGTGTGCAAGAACTGCAACCCCTTTAAAATTTaGCTGCACCAGCTCCTTAAGACCTTTGGTTTCATGACTTTAAAT +
Preference number: 5 (lower is better)
Translates to: IGGVLVCKNCNPFKI*LHQLLKTFGFMTLN
Trigger: ATTTAAAGTCATGAAACCAAAGGTCTTAAGGAGCTGGTGCAGGCAAATTTTAAAGGGGTTGCAGTTCTTGCACACTAGGACTCCTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACAAGCAAGGGATGAATTaGAGCAATCATCTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHKQGMN*SNHLLL
Trigger: CAGAAGAAGATGATTGCTCAAATTCATCCCTTGCTT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCAACAGTGGACTGACCTaGAACCAAAGGCAAAATCTG +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGNSGLT*NQRQNL
Trigger: CAGATTTTGCCTTTGGTTCAAGGTCAGTCCACTGTT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTGATCCGATCCTGTTaGCCATTTCCACTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLIRSC*PFPLGL
Trigger: TAACCCAAGTGGAAATGGCAAACAGGATCGGATCAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGAATATGCTTGCTTGTTaGGTGAGTCCCTCACATTCA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQNMLAC*VSPSHS
Trigger: TGAATGTGAGGGACTCACCAAACAAGCAAGCATATT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTATGAATATGCTTGCTaGTTTGGTGAGTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQYEYAC*FGESLT
Trigger: TGTGAGGGACTCACCAAACAAGCAAGCATATTCATA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCTTAGAGCCTGTCTGTaGGAAATTAGGGGATTGTAC +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLRACL*EIRGLY
Trigger: GTACAATCCCCTAATTTCCAACAGACAGGCTCTAAG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCAAAAGATGTCATTTTaGCTGACTGCTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQQKMSF*LTAAEE
Trigger: TTCCTCAGCAGCAGTCAGCAAAAATGACATCTTTTG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACCGAAGTTTTTGGATTTaGTGTGGCAGGTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHRSFWI*CGRFYF
Trigger: GAAATAGAACCTGCCACACAAAATCCAAAAACTTCG...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCTACAGATTGTTGTGTaGTTCCTGAAATTCCTACCC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLQIVV*FLKFLP
Trigger: GGGTAGGAATTTCAGGAACAACACAACAATCTGTAG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS TCA 90 bp TCTTGGAATATTCATTGCAGCCTTAATTCTCTCATCTTTGGGGGATaGTTCGGCAACTTTGTCATCTTCCGTCATTTCAACACTCTTTCG +
Preference number: 5 (lower is better)
Translates to: SWNIHCSLNSLIFGG*FGNFVIFRHFNTLS
Trigger: CGAAAGAGTGTTGAAATGACGGAAGATGACAAAGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAAGGCTGCAATGAATATTCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS CCA 90 bp TTACATCTCAGGTATCAGAATTATCAGAATGGACTTCCTTTTGCGTaGTCATGTATTTCCATAGCAACCAGATTAGAGGCTCTCGCAAAG +
Preference number: 5 (lower is better)
Translates to: LHLRYQNYQNGLPFA*SCISIATRLEALAK
Trigger: CTTTGCGAGAGCCTCTAATCTGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCTGAGATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 90 bp TGGTGCCATTATCTGCCTGTTATCTTCCACTTGATAAAGTATAGCTaGCTGCTTGGTTTCTACACTAGCACATTCAGAAATCTTACCATC +
Preference number: 5 (lower is better)
Translates to: WCHYLPVIFHLIKYS*LLGFYTSTFRNLTI
Trigger: GATGGTAAGATTTCTGAATGTGCTAGTGTAGAAACCAAGCAGCCAGCTATACTTTATCAAGTGGAAGATAACAGGCAGATAATGGCACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTACTTTCCGGTATATTaGAGCTGCATTCTGACACTC +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGYFPVY*SCILTL
Trigger: GAGTGTCAGAATGCAGCTCAAATATACCGGAAAGTA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTGGAAGAACCCAGACTaGACCATTTCATATGCTACT +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGWKNPD*TISYAT
Trigger: AGTAGCATATGAAATGGTCAAGTCTGGGTTCTTCCA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCGAGTCCAGGATTTCTaGCTAATAGGATTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQRVQDF*LIGFLR
Trigger: TCTCAAAAATCCTATTAGCAAGAAATCCTGGACTCG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354646.6
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTCTGCACTGATGAAGTaGGAAATGCCTGCATATTCA +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGSALMK*EMPAYS
Trigger: TGAATATGCAGGCATTTCCAACTTCATCAGTGCAGA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACATGTTGGGTAGCAATTaGGAATGTTTACTAGTAGAC +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHMLGSN*ECLLVD
Trigger: GTCTACTAGTAAACATTCCAAATTGCTACCCAACAT...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp CATAACATATATGATAACCCGGTTACTGCAGTCAGCATGGAGACAGCAGTACACGTGATGAGAATAACATaGTTTTCTCCATTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: HNIYDNPVTAVSMETAVHVMRIT*FSPFLH
Trigger: GTGCAGAAATGGAGAAAACAATGTTATTCTCATCAC...GTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCCATTGCTGAAGGATTaGTCAAATATTTCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGPLLKD*SNISLW
Trigger: CCACAGCGAAATATTTGACAAATCCTTCAGCAATGG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCATAGGAGCTATTGGTTaGTACACTCGTCTAGCTATC +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGIGAIG*YTRLAI
Trigger: GATAGCTAGACGAGTGTACAAACCAATAGCTCCTAT...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 90 bp CTACTCTTCAGTCCAGTTACATCTCAGGTATCAGAATTATCAGAATaGACTTCCTTTTGCGTGGTCATGTATTTCCATAGCAACCAGATT +
Preference number: 5 (lower is better)
Translates to: LLFSPVTSQVSELSE*TSFCVVMYFHSNQI
Trigger: AATCTGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCTGAGATGTAACTGGACTGAAGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 90 bp TTTTTCTCCTTTAGTCTAGCTTCTACTGTCAAAGTTGCAGCGACCTaGGGAACTCTGTTTTCAAATGAAATTCCATCAGGTTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: FFSFSLASTVKVAAT*GTLFSNEIPSGFSE
Trigger: TTCTGAGAAACCTGATGGAATTTCATTTGAAAACAGAGTTCCCCAGGTCGCTGCAACTTTGACAGTAGAAGCTAGACTAAAGGAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGCTGTTGTCTAACATGTaGATCAACTTCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLLSNM*INFSFF
Trigger: GAAGAAACTGAAGTTGATCAACATGTTAGACAACAG...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGATATTAGAAACCATTaGAGAGCCCATCGTTTGATT +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQDIRNH*RAHRLI
Trigger: AATCAAACGATGGGCTCTCAAATGGTTTCTAATATC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGTTGGAAATTAGGGGATaGTACAGGGCTATCTTTAAT +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQLEIRG*YRAIFN
Trigger: ATTAAAGATAGCCCTGTACAATCCCCTAATTTCCAA...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGACATTCAGGTCCCTTTaGAACACTGATATATTAGCA +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQTFRSL*NTDILA
Trigger: TGCTAATATATCAGTGTTCAAAAGGGACCTGAATGT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCTGAAAGATAAGAAGTaGTCACCTTGTTTGGGAACT +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLKDKK*SPCLGT
Trigger: AGTTCCCAAACAAGGTGACAACTTCTTATCTTTCAG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGATGTTGGGTAGCAATTaGGAATGTTTACTAGTAGAC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQMLGSN*ECLLVD
Trigger: GTCTACTAGTAAACATTCCAAATTGCTACCCAACAT...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp TATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCACACAGGTGATGAGAATAACATaGTTTTCTCCATTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: YFAVVVKAISTHCPLGTQVMRIT*FSPFLH
Trigger: GTGCAGAAATGGAGAAAACAATGTTATTCTCATCAC...CTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTGAGATTTCTGAGGTaGACTTTGAACACTGTTCAT +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLRFLR*TLNTVH
Trigger: ATGAACAGTGTTCAAAGTCAACCTCAGAAATCTCAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCGATATTAGAAACCATTaGAGAGCCCATCGTTTGATT +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGDIRNH*RAHRLI
Trigger: AATCAAACGATGGGCTCTCAAATGGTTTCTAATATC...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCCTGTTAACAGTAATGTaGGGTAGCAATTTGGAATGT +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLLTVM*GSNLEC
Trigger: ACATTCCAAATTGCTACCCAACATTACTGTTAACAG...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS-3UTR CAA 90 bp GTCAAATATTTCGCTGTGGTAGTTAAAGCAATTTCAACCCATTGCCCTTTAGGCTTGAATGATAGGCCATaGCTGAAGGATTTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: VKYFAVVVKAISTHCPLGLNDRP*LKDLSN
Trigger: ATTTGACAAATCCTTCAGCAATGGCCTATCATTCAA...GCCTAAAGGGCAATGGGTTGAAATTGCTTTAACTACCACAGCGAAATATTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 72 bp TCGATGTCTCGAGCTCCGCTCCGCGTCGTGTGCGCTTaGGCGCGCGAGCGTCTCCCCGCGAGCCCACCGGGC +
Preference number: 6 (lower is better)
Translates to: SMSRAPLRVVCA*ARERLPASPPG
Trigger: GCCCGGTGGGCTCGCGGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGGAGCTCGAGACATCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CAA 72 bp CTCGATGTCTCGAGCTCCGCTCCGCGTCGTGTGCGCTaGCGCGCGCGAGCGTCTCCCCGCGAGCCCACCGGG +
Preference number: 6 (lower is better)
Translates to: LDVSSSAPRRVR*RARASPREPTG
Trigger: CCCGGTGGGCTCGCGGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGGAGCTCGAGACATCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CAA 90 bp ACTCCTCTCCTCGATGTCTCGAGCTCCGCTCCGCGTCGTGTGCGCTaGCGCGCGCGAGCGTCTCCCCGCGAGCCCACCGGGCCAGCTACG +
Preference number: 6 (lower is better)
Translates to: TPLLDVSSSAPRRVR*RARASPREPTGPAT
Trigger: CGTAGCTGGCCCGGTGGGCTCGCGGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGGAGCTCGAGACATCGAGGAGAGGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 72 bp CTCTCCTCGATGTCTCGAGCTCCGCTCCGCGTCGTGTaGGCTTGCGCGCGCGAGCGTCTCCCCGCGAGCCCA +
Preference number: 6 (lower is better)
Translates to: LSSMSRAPLRVV*ACARERLPASP
Trigger: TGGGCTCGCGGGGAGACGCTCGCGCGCGCAAGCGCACACGACGCGGAGCGGAGCTCGAGACATCGAGGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 72 bp CACACACACCGCCTCCTCCTCGATCGCCTCCTCCGATaGTTCTTACTCCTCTCCTCGATGTCTCGAGCTCCG +
Preference number: 6 (lower is better)
Translates to: HTHRLLLDRLLR*FLLLSSMSRAP
Trigger: CGGAGCTCGAGACATCGAGGAGAGGAGTAAGAAGCATCGGAGGAGGCGATCGAGGAGGAGGCGGTGTGTGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS TCA 72 bp TCCACCTCCTGTCTGCAGATGAATGGCTCCACCGCTTaGCACAGCAGCAGGATAGGCCTCTGGATCCCCTGG +
Preference number: 6 (lower is better)
Translates to: STSCLQMNGSTA*HSSRIGLWIPW
Trigger: CCAGGGGATCCAGAGGCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS CAA 72 bp AAGCACCGATTTACAAATACTGGCCTCCCAGTTACGTaGCGGGGGCAACAGCCACGGCATGTCTCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: KHRFTNTGLPVT*RGQQPRHVSPA
Trigger: GGCGGGGGAGACATGCCGTGGCTGTTGCCCCCGCAACGTAACTGGGAGGCCAGTATTTGTAAATCGGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458404.1
CDS TCA 72 bp TTCCACTCCTGTCTGCAGATGAATGGCTCCACCGCTTaGCACAGCAGCAGGATAGGCCTCTGGATCCCCTGG +
Preference number: 6 (lower is better)
Translates to: FHSCLQMNGSTA*HSSRIGLWIPW
Trigger: CCAGGGGATCCAGAGGCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375169.7
CDS CAA 72 bp ATCCACCTCCTGTCTGCAGATGAATGGCTCCACCGCTaGACACAGCAGCAGGATAGGCCTCTGGATCCCCTG +
Preference number: 6 (lower is better)
Translates to: IHLLSADEWLHR*TQQQDRPLDPL
Trigger: CAGGGGATCCAGAGGCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS CAA 72 bp TTTCCACTCCTGTCTGCAGATGAATGGCTCCACCGCTaGACACAGCAGCAGGATAGGCCTCTGGATCCCCTG +
Preference number: 6 (lower is better)
Translates to: FPLLSADEWLHR*TQQQDRPLDPL
Trigger: CAGGGGATCCAGAGGCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375169.7
CDS CAA 90 bp GGCCAAAATATCCACCTCCTGTCTGCAGATGAATGGCTCCACCGCTaGACACAGCAGCAGGATAGGCCTCTGGATCCCCTGGAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: GQNIHLLSADEWLHR*TQQQDRPLDPLEVK
Trigger: CTTCACTTCCAGGGGATCCAGAGGCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGGTGGATATTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS CAA 90 bp TCTCTTCTGTTTCCACTCCTGTCTGCAGATGAATGGCTCCACCGCTaGACACAGCAGCAGGATAGGCCTCTGGATCCCCTGGAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: SLLFPLLSADEWLHR*TQQQDRPLDPLEVK
Trigger: CTTCACTTCCAGGGGATCCAGAGGCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGTGGAAACAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375169.7
CDS CAA 72 bp TGTGTCAAGGACTGGGGGCGGCTTCGAAGTTTGCTTTaGAAAGATCTTGGTCGACGTGGTGATGCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: CVKDWGRLRSLL*KDLGRRGDAGG
Trigger: GCCACCTGCATCACCACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp TTAGGCCAAAATATCCACCTCCTGTCTGCAGATGAATaGCTCCACCGCTTGACACAGCAGCAGGATAGGCCT +
Preference number: 6 (lower is better)
Translates to: LGQNIHLLSADE*LHRLTQQQDRP
Trigger: AGGCCTATCCTGCTGCTGTGTCAAGCGGTGGAGCCATTCATCTGCAGACAGGAGGTGGATATTTTGGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS CCA 72 bp TTGGGATTAGAAGTCGAAGCACCGATTTACAAATACTaGCCTCCCAGTTACGTTGCGGGGGCAACAGCCACG +
Preference number: 6 (lower is better)
Translates to: LGLEVEAPIYKY*PPSYVAGATAT
Trigger: CGTGGCTGTTGCCCCCGCAACGTAACTGGGAGGCCAGTATTTGTAAATCGGTGCTTCGACTTCTAATCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458404.1
CDS CAA 72 bp GGTGTGGTAAGCACTGATTACTCTCTGGACCAGTCTTaGCCACTGACTTTCCACTGCCAGCAAGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: GVVSTDYSLDQS*PLTFHCQQDWL
Trigger: CAGCCAGTCTTGCTGGCAGTGGAAAGTCAGTGGCAAAGACTGGTCCAGAGAGTAATCAGTGCTTACCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp TTGTCCACATGTGTCAAGGACTGGGGGCGGCTTCGAAGTTTGCTTTaGAAAGATCTTGGTCGACGTGGTGATGCAGGTGGCAAAGGAATC +
Preference number: 6 (lower is better)
Translates to: LSTCVKDWGRLRSLL*KDLGRRGDAGGKGI
Trigger: GATTCCTTTGCCACCTGCATCACCACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGTGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp ATGCCATTGTCCACATGTGTCAAGGACTGGGGGCGGCTTCGAAGTTaGCTTTTGAAAGATCTTGGTCGACGTGGTGATGCAGGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: MPLSTCVKDWGRLRS*LLKDLGRRGDAGGK
Trigger: TTTGCCACCTGCATCACCACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGTGGACAATGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 72 bp GTGGCAGGATTCTGCACTGATGAAGTTGGAAATGCCTaGATATTCATCCCTGGCTGGAATGGTCCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: VAGFCTDEVGNA*IFIPGWNGPPD
Trigger: ATCTGGGGGACCATTCCAGCCAGGGATGAATATGCAGGCATTTCCAACTTCATCAGTGCAGAATCCTGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp CTGAAGGACGGTAAGCTGAAATTTAGTCCCCTTCTCTaGTCGGGGACAGGAAGCTCTTCTCTGTTTGATCCG +
Preference number: 6 (lower is better)
Translates to: LKDGKLKFSPLL*SGTGSSSLFDP
Trigger: CGGATCAAACAGAGAAGAGCTTCCTGTCCCCGACCAGAGAAGGGGACTAAATTTCAGCTTACCGTCCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp CCCTTCTCTGGTCGGGGACAGGAAGCTCTTCTCTGTTaGATCCGATCCTGTTTGCCATTTCCACTTGGGTTA +
Preference number: 6 (lower is better)
Translates to: PFSGRGQEALLC*IRSCLPFPLGL
Trigger: TAACCCAAGTGGAAATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTCCTGTCCCCGACCAGAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp TCCACATGTGTCAAGGACTGGGGGCGGCTTCGAAGTTaGCTTTTGAAAGATCTTGGTCGACGTGGTGATGCA +
Preference number: 6 (lower is better)
Translates to: STCVKDWGRLRS*LLKDLGRRGDA
Trigger: TGCATCACCACGTCGACCAAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp TCTGGTCGGGGACAGGAAGCTCTTCTCTGTTTGATCCGATCCTGTTaGCCATTTCCACTTGGGTTATCAGGGCTACTGACGTTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: SGRGQEALLCLIRSC*PFPLGLSGLLTFSF
Trigger: GAAGGAAAACGTCAGTAGCCCTGATAACCCAAGTGGAAATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTCCTGTCCCCGACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp CCTTCTCTGGTCGGGGACAGGAAGCTCTTCTCTGTTTaGTCCGATCCTGTTTGCCATTTCCACTTGGGTTAT +
Preference number: 6 (lower is better)
Translates to: PSLVGDRKLFSV*SDPVCHFHLGY
Trigger: ATAACCCAAGTGGAAATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTCCTGTCCCCGACCAGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp GAGGAGACTGAGTCTCACGGTTTCTTATCGTCTGATTaGTACAGAATCGCCACCGACCAACTGGGGATGACT +
Preference number: 6 (lower is better)
Translates to: EETESHGFLSSD*YRIATDQLGMT
Trigger: AGTCATCCCCAGTTGGTCGGTGGCGATTCTGTATCAATCAGACGATAAGAAACCGTGAGACTCAGTCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp TTGGGCGGGAATTACTACAGATTGTTGTGTTGTTCCTaGAATTCCTACCCACTGTACTGGATACCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: LGGNYYRLLCCS*NSYPLYWIPRP
Trigger: GGGGCGGGGTATCCAGTACAGTGGGTAGGAATTTCAGGAACAACACAACAATCTGTAGTAATTCCCGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp AGTTGGAAATGCCTGCATATTCATCCCTGGCTGGAATaGTCCCCCAGATTGGGCGGGAATTACTACAGATTG +
Preference number: 6 (lower is better)
Translates to: SWKCLHIHPWLE*SPRLGGNYYRL
Trigger: CAATCTGTAGTAATTCCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATGAATATGCAGGCATTTCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp GATGAAGTTGGAAATGCCTGCATATTCATCCCTGGCTaGAATGGTCCCCCAGATTGGGCGGGAATTACTACA +
Preference number: 6 (lower is better)
Translates to: DEVGNACIFIPG*NGPPDWAGITT
Trigger: TGTAGTAATTCCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATGAATATGCAGGCATTTCCAACTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp GGACAGGAAGCTCTTCTCTGTTTGATCCGATCCTGTTaGCCATTTCCACTTGGGTTATCAGGGCTACTGACG +
Preference number: 6 (lower is better)
Translates to: GQEALLCLIRSC*PFPLGLSGLLT
Trigger: CGTCAGTAGCCCTGATAACCCAAGTGGAAATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTCCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp CTGCATATTCATCCCTGGCTGGAATGGTCCCCCAGATaGGGCGGGAATTACTACAGATTGTTGTGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: LHIHPWLEWSPR*GGNYYRLLCCS
Trigger: GGAACAACACAACAATCTGTAGTAATTCCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATGAATATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp AATTTAGTCCCCTTCTCTGGTCGGGGACAGGAAGCTCTTCTCTGTTaGATCCGATCCTGTTTGCCATTTCCACTTGGGTTATCAGGGCTA +
Preference number: 6 (lower is better)
Translates to: NLVPFSGRGQEALLC*IRSCLPFPLGLSGL
Trigger: TAGCCCTGATAACCCAAGTGGAAATGGCAAACAGGATCGGATCAAACAGAGAAGAGCTTCCTGTCCCCGACCAGAGAAGGGGACTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp GTTCTTCGTGGTGTGGTAAGCACTGATTACTCTCTGGACCAGTCTTaGCCACTGACTTTCCACTGCCAGCAAGACTGGCTGAAAATTCAC +
Preference number: 6 (lower is better)
Translates to: VLRGVVSTDYSLDQS*PLTFHCQQDWLKIH
Trigger: GTGAATTTTCAGCCAGTCTTGCTGGCAGTGGAAAGTCAGTGGCAAAGACTGGTCCAGAGAGTAATCAGTGCTTACCACACCACGAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 72 bp TACTCTCTGGACCAGTCTTTGCCACTGACTTTCCACTaGCAGCAAGACTGGCTGAAAATTCACTATCAGAGC +
Preference number: 6 (lower is better)
Translates to: YSLDQSLPLTFH*QQDWLKIHYQS
Trigger: GCTCTGATAGTGAATTTTCAGCCAGTCTTGCTGGCAGTGGAAAGTCAGTGGCAAAGACTGGTCCAGAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp TGCATATTCATCCCTGGCTGGAATGGTCCCCCAGATTaGGCGGGAATTACTACAGATTGTTGTGTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: CIFIPGWNGPPD*AGITTDCCVVP
Trigger: AGGAACAACACAACAATCTGTAGTAATTCCCGCCCAATCTGGGGGACCATTCCAGCCAGGGATGAATATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp GGCGTCACCCGGTCTCTAATGGATTTAGCAACAGCTTaGGAATCACTTTCATGGAAGAACCCAGACTTGACC +
Preference number: 6 (lower is better)
Translates to: GVTRSLMDLATA*ESLSWKNPDLT
Trigger: GGTCAAGTCTGGGTTCTTCCATGAAAGTGATTCCAAAGCTGTTGCTAAATCCATTAGAGACCGGGTGACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp AGGCTGACTTGCAGCCACATTGGACAGAAGCTTAGAGCCTGTCTGTaGGAAATTAGGGGATTGTACAGGGCTATCTTTAATTCCACAGTG +
Preference number: 6 (lower is better)
Translates to: RLTCSHIGQKLRACL*EIRGLYRAIFNSTV
Trigger: CACTGTGGAATTAAAGATAGCCCTGTACAATCCCCTAATTTCCAACAGACAGGCTCTAAGCTTCTGTCCAATGTGGCTGCAAGTCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp GGTGCTGGAGACCCTTCAACATCTCTGCTTCTTCCTTaGATCTTTGCTGCTCAGCTTTGGTTAACTTTCGGT +
Preference number: 6 (lower is better)
Translates to: GAGDPSTSLLLP*IFAAQLWLTFG
Trigger: ACCGAAAGTTAACCAAAGCTGAGCAGCAAAGATTCAAGGAAGAAGCAGAGATGTTGAAGGGTCTCCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp TCTCTTCTGTTTCCACTTGACGGACTTTTGATCTCTTaGAAAAGCTGGTTGACTGCCGTAGCCTGTATGCCC +
Preference number: 6 (lower is better)
Translates to: SLLFPLDGLLIS*KSWLTAVACMP
Trigger: GGGCATACAGGCTACGGCAGTCAACCAGCTTTTTCAAGAGATCAAAAGTCCGTCAAGTGGAAACAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS CCA 72 bp TGGACAGGAGAGGGTATCTTCAGCAGAGGAAGAAAATaGAGAGTCTATGCTTTGGGTATCCTTCTGACTCTC +
Preference number: 6 (lower is better)
Translates to: WTGEGIFSRGRK*RVYALGILLTL
Trigger: GAGAGTCAGAAGGATACCCAAAGCATAGACTCTCCATTTTCTTCCTCTGCTGAAGATACCCTCTCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp GTAGCAACTATGCCATTGTCCACATGTGTCAAGGACTaGGGGCGGCTTCGAAGTTTGCTTTTGAAAGATCTT +
Preference number: 6 (lower is better)
Translates to: VATMPLSTCVKD*GRLRSLLLKDL
Trigger: AAGATCTTTCAAAAGCAAACTTCGAAGCCGCCCCCAGTCCTTGACACATGTGGACAATGGCATAGTTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp GCAATATCCTCTGGCGCATCACCATCAACATCAAACTaGAAGGTGACCATCTTGTTGTTGTGTGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: AISSGASPSTSN*KVTILLLCVSS
Trigger: GCTGGAGACACACAACAACAAGATGGTCACCTTCAAGTTTGATGTTGATGGTGATGCGCCAGAGGATATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp CCCCAGATTGGGCGGGAATTACTACAGATTGTTGTGTaGTTCCTGAAATTCCTACCCACTGTACTGGATACC +
Preference number: 6 (lower is better)
Translates to: PQIGRELLQIVV*FLKFLPTVLDT
Trigger: GGTATCCAGTACAGTGGGTAGGAATTTCAGGAACAACACAACAATCTGTAGTAATTCCCGCCCAATCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp TTGAAGGTGACCATCTTGTTGTTGTGTGTCTCCAGCTaGCACTCTACCATGTTATCTCCAGAGGTTGATACC +
Preference number: 6 (lower is better)
Translates to: LKVTILLLCVSS*HSTMLSPEVDT
Trigger: GGTATCAACCTCTGGAGATAACATGGTAGAGTGTCAGCTGGAGACACACAACAACAAGATGGTCACCTTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp AGGAATTGTAATCACCTGGAACCGACCCCGCTGAAATaGTCCACTCATCGCTTTACATCTATTCAAAGCCCT +
Preference number: 6 (lower is better)
Translates to: RNCNHLEPTPLK*STHRFTSIQSP
Trigger: AGGGCTTTGAATAGATGTAAAGCGATGAGTGGATCATTTCAGCGGGGTCGGTTCCAGGTGATTACAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp GGGTCACTGAAGATACATCAGTCTCACAAGCTGCGCTaGAAGATAAGAAGTTGTCACCTTGTTTGGGAACTC +
Preference number: 6 (lower is better)
Translates to: GSLKIHQSHKLR*KIRSCHLVWEL
Trigger: GAGTTCCCAAACAAGGTGACAACTTCTTATCTTTCAGCGCAGCTTGTGAGACTGATGTATCTTCAGTGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp TTGAAGCTCCACCTTCAAGTCCTCATCCTCTATTTCTaGTTCATCATCACTGCTCATTGGGGAAGATGGCGA +
Preference number: 6 (lower is better)
Translates to: LKLHLQVLILYF*FIITAHWGRWR
Trigger: TCGCCATCTTCCCCAATGAGCAGTGATGATGAATCAGAAATAGAGGATGAGGACTTGAAGGTGGAGCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp TCGAAGTTTGCTTTTGAAAGATCTTGGTCGACGTGGTaGTGCAGGTGGCAAAGGAATCTCAGTAGATTGGGT +
Preference number: 6 (lower is better)
Translates to: SKFAFERSWSTW*CRWQRNLSRLG
Trigger: ACCCAATCTACTGAGATTCCTTTGCCACCTGCATCACCACGTCGACCAAGATCTTTCAAAAGCAAACTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 72 bp GTCCTAGTGTGCAAGAACTGCAACCCCTTTAAAATTTaGCTGCACCAGCTCCTTAAGACCTTTGGTTTCATG +
Preference number: 6 (lower is better)
Translates to: VLVCKNCNPFKI*LHQLLKTFGFM
Trigger: CATGAAACCAAAGGTCTTAAGGAGCTGGTGCAGGCAAATTTTAAAGGGGTTGCAGTTCTTGCACACTAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp TCTCTGTTTGATCCGATCCTGTTTGCCATTTCCACTTaGGTTATCAGGGCTACTGACGTTTTCCTTCGTAGT +
Preference number: 6 (lower is better)
Translates to: SLFDPILFAIST*VIRATDVFLRS
Trigger: ACTACGAAGGAAAACGTCAGTAGCCCTGATAACCCAAGTGGAAATGGCAAACAGGATCGGATCAAACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp AATTCCACAGTGACTGATGGCTATGACTTCTGTCACTaGACAGGAGAGGGTATCTTCAGCAGAGGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: NSTVTDGYDFCH*TGEGIFSRGRK
Trigger: TTTTCTTCCTCTGCTGAAGATACCCTCTCCTGTCCAGTGACAGAAGTCATAGCCATCAGTCACTGTGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp TTGGTGACATGGATACACAGGTATGAATATGCTTGCTaGTTTGGTGAGTCCCTCACATTCAGCTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: LVTWIHRYEYAC*FGESLTFSWNC
Trigger: GCAGTTCCAGCTGAATGTGAGGGACTCACCAAACAAGCAAGCATATTCATACCTGTGTATCCATGTCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp CACATTGGACAGAAGCTTAGAGCCTGTCTGTTGGAAATTAGGGGATaGTACAGGGCTATCTTTAATTCCACAGTGACTGATGGCTATGAC +
Preference number: 6 (lower is better)
Translates to: HIGQKLRACLLEIRG*YRAIFNSTVTDGYD
Trigger: GTCATAGCCATCAGTCACTGTGGAATTAAAGATAGCCCTGTACAATCCCCTAATTTCCAACAGACAGGCTCTAAGCTTCTGTCCAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp TCAAATGCCAGAGTTGTAAGAGAGTTACCAGAAGTCTaGGTTGATTCGCCAGGATGGGACATAAGTGCATCA +
Preference number: 6 (lower is better)
Translates to: SNARVVRELPEV*VDSPGWDISAS
Trigger: TGATGCACTTATGTCCCATCCTGGCGAATCAACTCAGACTTCTGGTAACTCTCTTACAACTCTGGCATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp ATCACTGCTCATTGGGGAAGATGGCGAATAGAAGAGTaGACTCTGTGTTTGAGCATAAGCTTGTTCTTCGTG +
Preference number: 6 (lower is better)
Translates to: ITAHWGRWRIEE*TLCLSISLFFV
Trigger: CACGAAGAACAAGCTTATGCTCAAACACAGAGTTCACTCTTCTATTCGCCATCTTCCCCAATGAGCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 72 bp AGTTTGGTGACATGGATACACAGGTATGAATATGCTTaGTTGTTTGGTGAGTCCCTCACATTCAGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SLVTWIHRYEYA*LFGESLTFSWN
Trigger: GTTCCAGCTGAATGTGAGGGACTCACCAAACAAGCAAGCATATTCATACCTGTGTATCCATGTCACCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS GCA 72 bp ATTCATTTAGGACCAGGAGGGATTGTGGCAGGATTCTaGACTGATGAAGTTGGAAATGCCTGCATATTCATC +
Preference number: 6 (lower is better)
Translates to: IHLGPGGIVAGF*TDEVGNACIFI
Trigger: GATGAATATGCAGGCATTTCCAACTTCATCAGTGCAGAATCCTGCCACAATCCCTCCTGGTCCTAAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 72 bp GCAGCCACATTGGACAGAAGCTTAGAGCCTGTCTGTTaGAAATTAGGGGATTGTACAGGGCTATCTTTAATT +
Preference number: 6 (lower is better)
Translates to: AATLDRSLEPVC*KLGDCTGLSLI
Trigger: AATTAAAGATAGCCCTGTACAATCCCCTAATTTCCAACAGACAGGCTCTAAGCTTCTGTCCAATGTGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp AGGTATCAGAATTATCAGAATGGACTTCCTTTTGCGTaGTCATGTATTTCCATAGCAACCTGCCGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: RYQNYQNGLPFA*SCISIATCRLW
Trigger: CCAAAGCCGGCAGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458404.1
CDS CAA 72 bp CTTGAACCAAAGGCAAAATCTGCGGCTGAGTCAGCTTaGAATGCTTCTGTAACCCTGAAACTTGCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: LEPKAKSAAESA*NASVTLKLAGN
Trigger: ATTACCAGCAAGTTTCAGGGTTACAGAAGCATTCAAAGCTGACTCAGCCGCAGATTTTGCCTTTGGTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp CTAGCACATTCAGAAATCTTACCATCAACCACATCCTaGTGTTCTGATTTGGAGGTGAAAAGTGCACGGTGG +
Preference number: 6 (lower is better)
Translates to: LAHSEILPSTTS*CSDLEVKSARW
Trigger: CCACCGTGCACTTTTCACCTCCAAATCAGAACACAAGGATGTGGTTGATGGTAAGATTTCTGAATGTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp TGCAGCCACATTGGACAGAAGCTTAGAGCCTGTCTGTaGGAAATTAGGGGATTGTACAGGGCTATCTTTAAT +
Preference number: 6 (lower is better)
Translates to: CSHIGQKLRACL*EIRGLYRAIFN
Trigger: ATTAAAGATAGCCCTGTACAATCCCCTAATTTCCAACAGACAGGCTCTAAGCTTCTGTCCAATGTGGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp CCTCATCCTCTATTTCTGATTCATCATCACTGCTCATaGGGGAAGATGGCGAATAGAAGAGTGAACTCTGTG +
Preference number: 6 (lower is better)
Translates to: PHPLFLIHHHCS*GKMANRRVNSV
Trigger: CACAGAGTTCACTCTTCTATTCGCCATCTTCCCCAATGAGCAGTGATGATGAATCAGAAATAGAGGATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp CCTTCAAGTCCTCATCCTCTATTTCTGATTCATCATCACTGCTCATaGGGGAAGATGGCGAATAGAAGAGTGAACTCTGTGTTTGAGCAT +
Preference number: 6 (lower is better)
Translates to: PSSPHPLFLIHHHCS*GKMANRRVNSVFEH
Trigger: ATGCTCAAACACAGAGTTCACTCTTCTATTCGCCATCTTCCCCAATGAGCAGTGATGATGAATCAGAAATAGAGGATGAGGACTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS TCA 72 bp CAAAGTTGCAGCGACCTGGGGAACTCTGTTTTCAAATaGAATTCCATCAGGTTTCTCAGAATCTTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: QSCSDLGNSVFK*NSIRFLRIFCA
Trigger: AGCACAGAAGATTCTGAGAAACCTGATGGAATTTCATTTGAAAACAGAGTTCCCCAGGTCGCTGCAACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS GCA 72 bp TCAGACAAATTGTCACCTGTAACAGAGGAGCAGTGCTaGTGTGGTTTTCTTTGTAGAAGCTGTTGTCTAACA +
Preference number: 6 (lower is better)
Translates to: SDKLSPVTEEQC*CGFLCRSCCLT
Trigger: TGTTAGACAACAGCTTCTACAAAGAAAACCACAGCAGCACTGCTCCTCTGTTACAGGTGACAATTTGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp CTTGGAATATTCATTGCAGCCTTAATTCTCTCATCTTaGGGGGATGATTCGGCAACTTTGTCATCTTCCGTC +
Preference number: 6 (lower is better)
Translates to: LGIFIAALILSS*GDDSATLSSSV
Trigger: GACGGAAGATGACAAAGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAAGGCTGCAATGAATATTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS CAA 72 bp GTTGACTGCCGTAGCCTGTATGCCCAGCTTTTTAATTaGCGAGTCCAGGATTTCTTGCTAATAGGATTTTTG +
Preference number: 6 (lower is better)
Translates to: VDCRSLYAQLFN*RVQDFLLIGFL
Trigger: CAAAAATCCTATTAGCAAGAAATCCTGGACTCGCAAATTAAAAAGCTGGGCATACAGGCTACGGCAGTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS CAA 90 bp GTTTCTACACTAGCACATTCAGAAATCTTACCATCAACCACATCCTaGTGTTCTGATTTGGAGGTGAAAAGTGCACGGTGGCATGGATTA +
Preference number: 6 (lower is better)
Translates to: VSTLAHSEILPSTTS*CSDLEVKSARWHGL
Trigger: TAATCCATGCCACCGTGCACTTTTCACCTCCAAATCAGAACACAAGGATGTGGTTGATGGTAAGATTTCTGAATGTGCTAGTGTAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp CGTAGCCTGTATGCCCAGCTTTTTAATTTGCGAGTCCAGGATTTCTaGCTAATAGGATTTTTGAGACTAGGACAAGTAAAGCTTAGGCCA +
Preference number: 6 (lower is better)
Translates to: RSLYAQLFNLRVQDF*LIGFLRLGQVKLRP
Trigger: TGGCCTAAGCTTTACTTGTCCTAGTCTCAAAAATCCTATTAGCAAGAAATCCTGGACTCGCAAATTAAAAAGCTGGGCATACAGGCTACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS TCA 72 bp ATTCATTGCAGCCTTAATTCTCTCATCTTTGGGGGATaGTTCGGCAACTTTGTCATCTTCCGTCATTTCAAC +
Preference number: 6 (lower is better)
Translates to: IHCSLNSLIFGG*FGNFVIFRHFN
Trigger: GTTGAAATGACGGAAGATGACAAAGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAAGGCTGCAATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS GCA 72 bp ATCTCTCTCTCTTTAAGCAACAGTTCAGATCCAGACTaGATGCTACTTCCTGTGGCTGAAGTTTCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: ISLSLSNSSDPD*MLLPVAEVSSN
Trigger: ATTTGAAGAAACTTCAGCCACAGGAAGTAGCATGCAGTCTGGATCTGAACTGTTGCTTAAAGAGAGAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp TTTAGTCTAGCTTCTACTGTCAAAGTTGCAGCGACCTaGGGAACTCTGTTTTCAAATGAAATTCCATCAGGT +
Preference number: 6 (lower is better)
Translates to: FSLASTVKVAAT*GTLFSNEIPSG
Trigger: ACCTGATGGAATTTCATTTGAAAACAGAGTTCCCCAGGTCGCTGCAACTTTGACAGTAGAAGCTAGACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS CAA 72 bp GGCTGGTTTTATGCCACTAGTTACTTTCCGGTATATTaGAGCTGCATTCTGACACTCAGAATAAGGATACTC +
Preference number: 6 (lower is better)
Translates to: GWFYATSYFPVY*SCILTLRIRIL
Trigger: GAGTATCCTTATTCTGAGTGTCAGAATGCAGCTCAAATATACCGGAAAGTAACTAGTGGCATAAAACCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp ATTGCAGCCTTAATTCTCTCATCTTTGGGGGATGATTCGGCAACTTaGTCATCTTCCGTCATTTCAACACTCTTTCGGAAAAATCTCTTC +
Preference number: 6 (lower is better)
Translates to: IAALILSSLGDDSAT*SSSVISTLFRKNLF
Trigger: GAAGAGATTTTTCCGAAAGAGTGTTGAAATGACGGAAGATGACAAAGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAAGGCTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS CAA 90 bp TTCTTTATTGGCGTCACCCGGTCTCTAATGGATTTAGCAACAGCTTaGGAATCACTTTCATGGAAGAACCCAGACTTGACCATTTCATAT +
Preference number: 6 (lower is better)
Translates to: FFIGVTRSLMDLATA*ESLSWKNPDLTISY
Trigger: ATATGAAATGGTCAAGTCTGGGTTCTTCCATGAAAGTGATTCCAAAGCTGTTGCTAAATCCATTAGAGACCGGGTGACGCCAATAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 90 bp GGAACTATTAGTAACTGGTGCCATTATCTGCCTGTTATCTTCCACTaGATAAAGTATAGCTGGCTGCTTGGTTTCTACACTAGCACATTC +
Preference number: 6 (lower is better)
Translates to: GTISNWCHYLPVIFH*IKYSWLLGFYTSTF
Trigger: GAATGTGCTAGTGTAGAAACCAAGCAGCCAGCTATACTTTATCAAGTGGAAGATAACAGGCAGATAATGGCACCAGTTACTAATAGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp AGGTATCAGAATTATCAGAATGGACTTCCTTTTGCGTaGTCATGTATTTCCATAGCAACCAGATTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: RYQNYQNGLPFA*SCISIATRLEA
Trigger: AGCCTCTAATCTGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS CCA 72 bp AAAGTTATCTTCAACCATATAGTCTGCAATATCCTCTaGCGCATCACCATCAACATCAAACTTGAAGGTGAC +
Preference number: 6 (lower is better)
Translates to: KVIFNHIVCNIL*RITINIKLEGD
Trigger: GTCACCTTCAAGTTTGATGTTGATGGTGATGCGCCAGAGGATATTGCAGACTATATGGTTGAAGATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp TTAATTCTCTCATCTTTGGGGGATGATTCGGCAACTTaGTCATCTTCCGTCATTTCAACACTCTTTCGGAAA +
Preference number: 6 (lower is better)
Translates to: LILSSLGDDSAT*SSSVISTLFRK
Trigger: TTTCCGAAAGAGTGTTGAAATGACGGAAGATGACAAAGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS CAA 90 bp TTATCTACTCTTGGAATATTCATTGCAGCCTTAATTCTCTCATCTTaGGGGGATGATTCGGCAACTTTGTCATCTTCCGTCATTTCAACA +
Preference number: 6 (lower is better)
Translates to: LSTLGIFIAALILSS*GDDSATLSSSVIST
Trigger: TGTTGAAATGACGGAAGATGACAAAGTTGCCGAATCATCCCCCAAAGATGAGAGAATTAAGGCTGCAATGAATATTCCAAGAGTAGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000458404.1
ENST00000620763.1
CDS GCA 72 bp TCTCAGGTATCAGAATTATCAGAATGGACTTCCTTTTaGGTGGTCATGTATTTCCATAGCAACCAGATTAGA +
Preference number: 6 (lower is better)
Translates to: SQVSELSEWTSF*VVMYFHSNQIR
Trigger: TCTAATCTGGTTGCTATGGAAATACATGACCACGCAAAAGGAAGTCCATTCTGATAATTCTGATACCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354646.6
ENST00000375169.7
CDS GCA 72 bp TTTTATGCCACTAGTTACTTTCCGGTATATTTGAGCTaGATTCTGACACTCAGAATAAGGATACTCCGATGT +
Preference number: 6 (lower is better)
Translates to: FYATSYFPVYLS*ILTLRIRILRC
Trigger: ACATCGGAGTATCCTTATTCTGAGTGTCAGAATGCAGCTCAAATATACCGGAAAGTAACTAGTGGCATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp CTAATGGATTTAGCAACAGCTTTGGAATCACTTTCATaGAAGAACCCAGACTTGACCATTTCATATGCTACT +
Preference number: 6 (lower is better)
Translates to: LMDLATALESLS*KNPDLTISYAT
Trigger: AGTAGCATATGAAATGGTCAAGTCTGGGTTCTTCCATGAAAGTGATTCCAAAGCTGTTGCTAAATCCATTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CCA 72 bp TATCTGCCTGTTATCTTCCACTTGATAAAGTATAGCTaGCTGCTTGGTTTCTACACTAGCACATTCAGAAAT +
Preference number: 6 (lower is better)
Translates to: YLPVIFHLIKYS*LLGFYTSTFRN
Trigger: ATTTCTGAATGTGCTAGTGTAGAAACCAAGCAGCCAGCTATACTTTATCAAGTGGAAGATAACAGGCAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp TCAATGATTTCTTTGACTTCAGGATCAGTGACTTTATaGAAGCTGGCTGGTTTTATGCCACTAGTTACTTTC +
Preference number: 6 (lower is better)
Translates to: SMISLTSGSVTL*KLAGFMPLVTF
Trigger: GAAAGTAACTAGTGGCATAAAACCAGCCAGCTTCAATAAAGTCACTGATCCTGAAGTCAAAGAAATCATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1
CDS CAA 72 bp TATGCCCAGCTTTTTAATTTGCGAGTCCAGGATTTCTaGCTAATAGGATTTTTGAGACTAGGACAAGTAAAG +
Preference number: 6 (lower is better)
Translates to: YAQLFNLRVQDF*LIGFLRLGQVK
Trigger: CTTTACTTGTCCTAGTCTCAAAAATCCTATTAGCAAGAAATCCTGGACTCGCAAATTAAAAAGCTGGGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000620763.1
CDS TCA 72 bp TTTGGATTTTGTGTGGCAGGTTCTATTTCTACCAACTaGGACTTTGCTGTTTTAATAAAGGCTTCTTCACTA +
Preference number: 6 (lower is better)
Translates to: FGFCVAGSISTN*DFAVLIKASSL
Trigger: TAGTGAAGAAGCCTTTATTAAAACAGCAAAGTCTCAGTTGGTAGAAATAGAACCTGCCACACAAAATCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354646.6
ENST00000375159.6
ENST00000375169.7
ENST00000620763.1