RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000060237

Ensembl transcript IDs: ENST00000315939.11, ENST00000340908.9, ENST00000447667.2, ENST00000530271.6, ENST00000534872.1, ENST00000535572.5, ENST00000535698.1, ENST00000537603.1, ENST00000537687.5, ENST00000540360.5, ENST00000540885.1, ENST00000542424.1, ENST00000542543.1, ENST00000544559.1, ENST00000545055.1, ENST00000545285.5, ENST00000574679.1, ENST00000674810.1, ENST00000675236.1, ENST00000675631.1, ENST00000676347.1

Found 1597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGAGCTCCACCCACTCGAAATTACAGATGGGTTTGATTTTACATTaGGTTCTCCAGCTTCCTTATGAACAAGACTTTCCTAGCCCTCAT +
Preference number: 1 (lower is better)
Translates to: KSSTHSKLQMGLILH*VLQLPYEQDFPSPH
Trigger: ATGAGGGCTAGGAAAGTCTTGTTCATAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCCATCTGTAATTTCGAGTGGGTGGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR TCA 90 bp GTACCAAAAGCAAGAGCTCCACCCACTCGAAATTACAGATGGGTTTaGTTTTACATTGAGTTCTCCAGCTTCCTTATGAACAAGACTTTC +
Preference number: 1 (lower is better)
Translates to: VPKARAPPTRNYRWV*FYIEFSSFLMNKTF
Trigger: GAAAGTCTTGTTCATAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCCATCTGTAATTTCGAGTGGGTGGAGCTCTTGCTTTTGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTGGTTCGGATTCTTaGGGGAGTGAGGGATTCAGG +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCGSDS*GSEGFR
Trigger: CCTGAATCCCTCACTCCCTCAAGAATCCGAACCACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCCATTCCAATAACTaGAGCGGGGGAGACTCTCCA +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSHSNN*SGGDSP
Trigger: TGGAGAGTCTCCCCCGCTCCAGTTATTGGAATGGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGAGACTCTCCATTCTaGGGGCTCAATGCAGTATTA +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGDSPF*GLNAVL
Trigger: TAATACTGCATTGAGCCCTCAGAATGGAGAGTCTCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGCATTCCATCTCCTaGCCCCAGATCTATTCAGTT +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQHSIS*PQIYSV
Trigger: AACTGAATAGATCTGGGGGCAGGAGATGGAATGCTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGGTTTTTGTCCTGTaGTTCGGATTCTTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVVFVL*FGFLRE
Trigger: CTCCCTCAAGAATCCGAACCACAGGACAAAAACCAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGCACCCCAGTACCCTaGTATTTTTCACTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCTPVP*YFSLGS
Trigger: AGAACCCAGTGAAAAATACCAGGGTACTGGGGTGCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGCATAACCACTGCTaGACTGCTGGGGTCACATGG +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWHNHC*TAGVTW
Trigger: CCATGTGACCCCAGCAGTCCAGCAGTGGTTATGCCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTGGTTCGGATTCTTaGGGGAGTGAGGGATTCAGG +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCGSDS*GSEGFR
Trigger: CCTGAATCCCTCACTCCCTCAAGAATCCGAACCACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTTTGGCATAACCACTaGTGGACTGCTGGGGTCACA +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLWHNH*WTAGVT
Trigger: TGTGACCCCAGCAGTCCAGCAGTGGTTATGCCAAAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCCATTCCAATAACTaGAGCGGGGGAGACTCTCCA +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSHSNN*SGGDSP
Trigger: TGGAGAGTCTCCCCCGCTCCAGTTATTGGAATGGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGCATAACCACTGCTaGACTGCTGGGGTCACATGG +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSWHNHC*TAGVTW
Trigger: CCATGTGACCCCAGCAGTCCAGCAGTGGTTATGCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGATTCTTGAGGGAGTaGGGGATTCAGGGCATGTAC +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSGFLRE*GIQGMY
Trigger: GTACATGCCCTGAATCCCTCACTCCCTCAAGAATCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTGGTTCGGATTCTTaGGGGAGTGAGGGATTCAGG +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSCGSDS*GSEGFR
Trigger: CCTGAATCCCTCACTCCCTCAAGAATCCGAACCACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATCATAAGAAAGAGTTaGACCCCAGTACCCTGGTAT +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDIIRKS*TPVPWY
Trigger: ATACCAGGGTACTGGGGTGCAACTCTTTCTTATGAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTTTGGCATAACCACTaGTGGACTGCTGGGGTCACA +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSLWHNH*WTAGVT
Trigger: TGTGACCCCAGCAGTCCAGCAGTGGTTATGCCAAAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCCATTCCAATAACTaGAGCGGGGGAGACTCTCCA +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSSHSNN*SGGDSP
Trigger: TGGAGAGTCTCCCCCGCTCCAGTTATTGGAATGGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAGAGCCCAGTAGGTaGTTTTTGTCCTGTGGTTCG +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLREPSR*FLSCGS
Trigger: CGAACCACAGGACAAAAACCACCTACTGGGCTCTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTGCTGGGGTCACATaGACCTACGATTTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTAGVT*TYDFLP
Trigger: TGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGAGACTCTCCATTCTaGGGGCTCAATGCAGTATTA +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGDSPF*GLNAVL
Trigger: TAATACTGCATTGAGCCCTCAGAATGGAGAGTCTCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGGAAAGCATGGTCTaGAGCTGCCCCTTGACAAAA +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSQESMV*SCPLTK
Trigger: TTTTGTCAAGGGGCAGCTTCAGACCATGCTTTCCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTTCCACATCAAAACTaGTGGCAAAGTTACATGTCC +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFPHQN*WQSYMS
Trigger: GGACATGTAACTTTGCCATCAGTTTTGATGTGGAAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGCATTCCATCTCCTaGCCCCAGATCTATTCAGTT +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQHSIS*PQIYSV
Trigger: AACTGAATAGATCTGGGGGCAGGAGATGGAATGCTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGAGAGCCCAGTAGGTaGTTTTTGTCCTGTGGTTCG +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSREPSR*FLSCGS
Trigger: CGAACCACAGGACAAAAACCACCTACTGGGCTCTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGCACCCCAGTACCCTaGTATTTTTCACTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCTPVP*YFSLGS
Trigger: AGAACCCAGTGAAAAATACCAGGGTACTGGGGTGCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTGCTGGGGTCACATaGACCTACGATTTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSTAGVT*TYDFLP
Trigger: TGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAGACTCTCCATTCTaGGGGCTCAATGCAGTATTA +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSGDSPF*GLNAVL
Trigger: TAATACTGCATTGAGCCCTCAGAATGGAGAGTCTCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGCATTCCATCTCCTaGCCCCAGATCTATTCAGTT +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSQHSIS*PQIYSV
Trigger: AACTGAATAGATCTGGGGGCAGGAGATGGAATGCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGTTTTTGTCCTGTaGTTCGGATTCTTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSVVFVL*FGFLRE
Trigger: CTCCCTCAAGAATCCGAACCACAGGACAAAAACCAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCTGGTATTTTTCACTaGGTTCTAAAGAGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPGIFH*VLKSKE
Trigger: TTCTTTGCTCTTTAGAACCCAGTGAAAAATACCAGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGCACCCCAGTACCCTaGTATTTTTCACTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSCTPVP*YFSLGS
Trigger: AGAACCCAGTGAAAAATACCAGGGTACTGGGGTGCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGCATAACCACTGCTaGACTGCTGGGGTCACATGG +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWHNHC*TAGVTW
Trigger: CCATGTGACCCCAGCAGTCCAGCAGTGGTTATGCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR CAA 90 bp ACGATTTCCTTCCACATGCCCTTTATTGATCTGGGGTCTGGTAAGTaGATGCTAATGGCAGAAGCAATAGAAGTCCAAGGCACTAAAATG +
Preference number: 2 (lower is better)
Translates to: TISFHMPFIDLGSGK*MLMAEAIEVQGTKM
Trigger: CATTTTAGTGCCTTGGACTTCTATTGCTTCTGCCATTAGCATCAACTTACCAGACCCCAGATCAATAAAGGGCATGTGGAAGGAAATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGATTCTTGAGGGAGTaGGGGATTCAGGGCATGTAC +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGFLRE*GIQGMY
Trigger: GTACATGCCCTGAATCCCTCACTCCCTCAAGAATCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTGGTTCGGATTCTTaGGGGAGTGAGGGATTCAGG +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCGSDS*GSEGFR
Trigger: CCTGAATCCCTCACTCCCTCAAGAATCCGAACCACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATCATAAGAAAGAGTTaGACCCCAGTACCCTGGTAT +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLIIRKS*TPVPWY
Trigger: ATACCAGGGTACTGGGGTGCAACTCTTTCTTATGAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTTCCACATCAAAACTaGTGGCAAAGTTACATGTCC +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFPHQN*WQSYMS
Trigger: GGACATGTAACTTTGCCATCAGTTTTGATGTGGAAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATCATAAGAAAGAGTTaGACCCCAGTACCCTGGTAT +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSIIRKS*TPVPWY
Trigger: ATACCAGGGTACTGGGGTGCAACTCTTTCTTATGAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTGCTGGGGTCACATaGACCTACGATTTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTAGVT*TYDFLP
Trigger: TGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGAGACTCTCCATTCTaGGGGCTCAATGCAGTATTA +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGDSPF*GLNAVL
Trigger: TAATACTGCATTGAGCCCTCAGAATGGAGAGTCTCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTCCACATCAAAACTaGTGGCAAAGTTACATGTCC +
Preference number: 2 (lower is better)
Translates to: CPILLQHPLLTIPETELSFPHQN*WQSYMS
Trigger: GGACATGTAACTTTGCCATCAGTTTTGATGTGGAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGCATTCCATCTCCTaGCCCCAGATCTATTCAGTT +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQHSIS*PQIYSV
Trigger: AACTGAATAGATCTGGGGGCAGGAGATGGAATGCTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCTGGTATTTTTCACTaGGTTCTAAAGAGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPGIFH*VLKSKE
Trigger: TTCTTTGCTCTTTAGAACCCAGTGAAAAATACCAGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGCACCCCAGTACCCTaGTATTTTTCACTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCTPVP*YFSLGS
Trigger: AGAACCCAGTGAAAAATACCAGGGTACTGGGGTGCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACGATTTCCTTCCACATaGCCTTTATTGATCTGGGGT +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRFPST*PLLIWG
Trigger: ACCCCAGATCAATAAAGGGCATGTGGAAGGAAATCG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTGTTTTTAACCACTaGTGCCAACCTAACTTCCCA +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSVFNH*CQPNFP
Trigger: TGGGAAGTTAGGTTGGCATCAGTGGTTAAAAACAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATCATAAGAAAGAGTTaGACCCCAGTACCCTGGTAT +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKIIRKS*TPVPWY
Trigger: ATACCAGGGTACTGGGGTGCAACTCTTTCTTATGAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTATATGACAGTCACTaGCCAGGCATCACGTTTGTT +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLYDSH*PGITFV
Trigger: AACAAACGTGATGCCTGGCCAGTGACTGTCATATAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTTCCACATCAAAACTaGTGGCAAAGTTACATGTCC +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFPHQN*WQSYMS
Trigger: GGACATGTAACTTTGCCATCAGTTTTGATGTGGAAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATTCTGAGGGCTCAATaGAGTATTAAAAACATTCCC +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKILRAQ*SIKNIP
Trigger: GGGAATGTTTTTAATACTGCATTGAGCCCTCAGAAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCTGGTATTTTTCACTaGGTTCTAAAGAGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPGIFH*VLKSKE
Trigger: TTCTTTGCTCTTTAGAACCCAGTGAAAAATACCAGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR TCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCTATCACTTAAAACTCTaGCAGAGCCAGGATTCTAAA +
Preference number: 2 (lower is better)
Translates to: TNIENPISHKYNGSPPEFYHLKL*QSQDSK
Trigger: TTTAGAATCCTGGCTCTGTCAGAGTTTTAAGTGATA...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
3UTR-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTATCATAAGAAAGAGTaGCACCCCAGTACCCTGGTA +
Preference number: 3 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDYHKKE*HPSTLV
Trigger: TACCAGGGTACTGGGGTGCAACTCTTTCTTATGATA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGGGGTCTGGTAAGTaGATGCTAATGGCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLGSGK*MLMAEA
Trigger: TGCTTCTGCCATTAGCATCAACTTACCAGACCCCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCAGTAGGTGGTTTTaGTCCTGTGGTTCGGATTCT +
Preference number: 3 (lower is better)
Translates to: CPILLQHPLLTIPETELSPSRWF*SCGSDS
Trigger: AGAATCCGAACCACAGGACAAAAACCACCTACTGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGGGTCTGGTAAGTaGATGCTAATGGCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: CPILLQHPLLTIPETELSLGSGK*MLMAEA
Trigger: TGCTTCTGCCATTAGCATCAACTTACCAGACCCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCACATGCCCTTTATaGATCTGGGGTCTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSTCPL*IWGLVS
Trigger: ACTTACCAGACCCCAGATCAATAAAGGGCATGTGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTATCATAAGAAAGAGTaGCACCCCAGTACCCTGGTA +
Preference number: 3 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYHKKE*HPSTLV
Trigger: TACCAGGGTACTGGGGTGCAACTCTTTCTTATGATA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCACATGCCCTTTATaGATCTGGGGTCTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: CPILLQHPLLTIPETELSSTCPL*IWGLVS
Trigger: ACTTACCAGACCCCAGATCAATAAAGGGCATGTGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTATCATAAGAAAGAGTaGCACCCCAGTACCCTGGTA +
Preference number: 3 (lower is better)
Translates to: CPILLQHPLLTIPETELSYHKKE*HPSTLV
Trigger: TACCAGGGTACTGGGGTGCAACTCTTTCTTATGATA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR TCA 72 bp GCAAGAGCTCCACCCACTCGAAATTACAGATGGGTTTaGTTTTACATTGAGTTCTCCAGCTTCCTTATGAAC +
Preference number: 3 (lower is better)
Translates to: ARAPPTRNYRWV*FYIEFSSFLMN
Trigger: GTTCATAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCCATCTGTAATTTCGAGTGGGTGGAGCTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGGTTTGATTTTACATaGAGTTCTCCAGCTTCCTTA +
Preference number: 3 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGFDFT*SSPASL
Trigger: TAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCAGTAGGTGGTTTTaGTCCTGTGGTTCGGATTCT +
Preference number: 3 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPSRWF*SCGSDS
Trigger: AGAATCCGAACCACAGGACAAAAACCACCTACTGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGGGGTCTGGTAAGTaGATGCTAATGGCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLGSGK*MLMAEA
Trigger: TGCTTCTGCCATTAGCATCAACTTACCAGACCCCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR GCA 72 bp AACTTTCCACAAAATGTAGTACCCCAAGCTGAGAAATaGATGGTACATGTGCAACAAGAGGAAAGCAATCCA +
Preference number: 3 (lower is better)
Translates to: NFPQNVVPQAEK*MVHVQQEESNP
Trigger: TGGATTGCTTTCCTCTTGTTGCACATGTACCATGCATTTCTCAGCTTGGGGTACTACATTTTGTGGAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTTTGATTTTACATaGAGTTCTCCAGCTTCCTTA +
Preference number: 3 (lower is better)
Translates to: CPILLQHPLLTIPETELSGFDFT*SSPASL
Trigger: TAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCACATGCCCTTTATaGATCTGGGGTCTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSTCPL*IWGLVS
Trigger: ACTTACCAGACCCCAGATCAATAAAGGGCATGTGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGCCAGGCATCACGTTaGTTTCCTCATTCTTTAGTC +
Preference number: 3 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGQASR*FPHSLV
Trigger: GACTAAAGAATGAGGAAACAAACGTGATGCCTGGCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATATCATAAGAAAGAGTaGCACCCCAGTACCCTGGTA +
Preference number: 3 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYHKKE*HPSTLV
Trigger: TACCAGGGTACTGGGGTGCAACTCTTTCTTATGATA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR CCA 72 bp CCTAGCTCAAATAAGAAAGGTTTATATGACAGTCACTaGCCAGGCATCACGTTTGTTTCCTCATTCTTTAGT +
Preference number: 3 (lower is better)
Translates to: PSSNKKGLYDSH*PGITFVSSFFS
Trigger: ACTAAAGAATGAGGAAACAAACGTGATGCCTGGCCAGTGACTGTCATATAAACCTTTCTTATTTGAGCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTAAGTTGTCCAATTTaGTTACAACACCCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLSCPI*LQHPLL
Trigger: GAGGAGGGGGTGTTGTAACAAAATTGGACAACTTAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR TCA 72 bp ACCCACTCGAAATTACAGATGGGTTTGATTTTACATTaGGTTCTCCAGCTTCCTTATGAACAAGACTTTCCT +
Preference number: 3 (lower is better)
Translates to: THSKLQMGLILH*VLQLPYEQDFP
Trigger: AGGAAAGTCTTGTTCATAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCCATCTGTAATTTCGAGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGTTTGATTTTACATaGAGTTCTCCAGCTTCCTTA +
Preference number: 3 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGFDFT*SSPASL
Trigger: TAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCGCCCGCCCCAGGCCTaGCAAACCCGTCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRPPQA*QTRLLP
Trigger: CGGGAGGAGACGGGTTTGCCAGGCCTGGGGCGGGCG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGGCGATTCGGGAGCTaGGCCACGGGGGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGRFGS*ATGVSA
Trigger: GGCGCTAACCCCCGTGGCTCAGCTCCCGAATCGCCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGCTGGCACCGAGGCTaGTGCGGCTCACGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGWHRG*CGSRGG
Trigger: CCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACGCGCCCCCAGCGATaGGGACCGGCCTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTRPQR*GPASQV
Trigger: GACCTGTGAGGCCGGTCCCCATCGCTGGGGGCGCGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCGGTGGGGCTCCGGTaGAGCACTCTGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPVGLR*STLRDS
Trigger: GCTGTCCCGCAGAGTGCTCCACCGGAGCCCCACCGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGGCGGCAGCGGCTaGAGGCTGCTGGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRGGSG*RLLGYL
Trigger: CAGGTAGCCCAGCAGCCTCCAGCCGCTGCCGCCCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGCACCGAGGCTGCTaGGGCTCACGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWHRGC*GSRGGL
Trigger: GAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCGGGAGTGCTGCTCTaGTTCTCTGCGGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPGVLL*FSAAPP
Trigger: TGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGACAGCCGCGGGGATaGTGGGCTGGGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGQPRG*WAGAGK
Trigger: TTTCCCTGCCCCAGCCCAGCATCCCCGCGGCTGTCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGCTGGAGCCATTCTTaGGGGCAGGAGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSWSHS*GQEPAA
Trigger: CGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGCTGCTGGGCTACCTaGGAAGTGGCGGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGCWAT*EVAVAV
Trigger: GACCGCCACCGCCACTTCCCAGGTAGCCCAGCAGCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTCCGTTCCTCCTGTaGCTCCTTGGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAPFLL*LLGAAA
Trigger: GGCGGCAGCGCCAAGGAGCCACAGGAGGAACGGAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGGCCAAGTGGCTGTaGTGCTGGGCCACCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLAKWL*CWATRP
Trigger: GGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGCGCCGCAGTCATaGGGGGAGGGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSEAPQS*GEGQGP
Trigger: CGGCCCCTGGCCCTCCCCTCATGACTGCGGCGCCTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCGAGTCGAGGCGGATaGGGCGGACGCGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPSRGG*GGRGSH
Trigger: GTGGGAGCCGCGTCCGCCGCATCCGCCTCGACTCGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGGAACCGGGAGTGCTaGTCTGCTTCTCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGNREC*SASLRR
Trigger: GCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTACTCCTCGGTCCTaGCGGTCACAGCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCTPRS*RSQRRR
Trigger: CCGCCGACGCTGTGACCGGCAGGACCGAGGAGTACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCAGCGGCTGGAGGCTaGTGGGCTACCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAAAGG*WATWEV
Trigger: CACTTCCCAGGTAGCCCAGCAGCCTCCAGCCGCTGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCCAAGTGGCTGTGGTaGTGGGCCACCCGTCCCACT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAKWLW*WATRPT
Trigger: AGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCGGCGCCGCCAGACATaGTCGGTTCGCTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRRRQT*SVRWRE
Trigger: CTCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACGGTCTCTTCCCGGTaGGGCTCCGGTGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTVSSR*GSGGAL
Trigger: GAGTGCTCCACCGGAGCCCCACCGGGAAGAGACCGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCTCCTGTGGCTCCTTaGCGCTGCCGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPPVAP*RCRRRC
Trigger: GCAGCGGCGGCGGCAGCGCCAAGGAGCCACAGGAGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGGCGATTCGGGAGCTaGGCCACGGGGGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGRFGS*ATGVSA
Trigger: GGCGCTAACCCCCGTGGCTCAGCTCCCGAATCGCCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCGTCGTCTTCTCCCTaGAAGGGGAGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSSSSP*KGSSWG
Trigger: CCCCCAGCTGCTCCCCTTTCAGGGAGAAGACGACGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCACCGAAGATGGGGGTaGGGAGTGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHRRWG*GVAERG
Trigger: TCCTCTCTCGGCCACTCCGCACCCCCATCTTCGGTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTGCTCTGCTTCTCTaGGGCGCCGCCAGACATGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAALLL*GAARHG
Trigger: ACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACGCGCCCCCAGCGATaGGGACCGGCCTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTRPQR*GPASQV
Trigger: GACCTGTGAGGCCGGTCCCCATCGCTGGGGGCGCGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACATGGTCGGTTCGCTaGAGAGAGGCGAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTWSVR*REASGL
Trigger: GAGCCCGCTCGCCTCTCTCCAGCGAACCGACCATGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCGGTGGGGCTCCGGTaGAGCACTCTGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPVGLR*STLRDS
Trigger: GCTGTCCCGCAGAGTGCTCCACCGGAGCCCCACCGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCTCCTGTGGCTCCTTaGCGCTGCCGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPPVAP*RCRRRC
Trigger: GCAGCGGCGGCGGCAGCGCCAAGGAGCCACAGGAGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGAGGGAAGGCAGGCTaGAGCGTCGGTGCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRGKAG*SVGACA
Trigger: AGCGCAAGCACCGACGCTCCAGCCTGCCTTCCCTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGTGGCTGTGGTGCTaGGCCACCCGTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKWLWC*ATRPTP
Trigger: TGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTCCGCTGCTTCTCTaGGGCAAGAGGAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAPLLL*GKRRGD
Trigger: GTCTCCTCTCCTCTTGCCTCAGAGAAGCAGCGGAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGCGATTCGGGAGCTaGGCCACGGGGGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGRFGS*ATGVSA
Trigger: GGCGCTAACCCCCGTGGCTCAGCTCCCGAATCGCCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTACTTGAGGATGGCTaGCCCTGGCTCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLLEDG*PWLCPC
Trigger: ACAGGGGCAGAGCCAGGGTCAGCCATCCTCAAGTAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGCCTGCTGCCTGCTaGGATACTACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLPAAC*DTTAGG
Trigger: GCCTCCAGCTGTAGTATCTCAGCAGGCAGCAGGCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGGCTGTAACAGCTaGTTCTGCCCGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRGCNS*FCPDSG
Trigger: CCCAGAGTCCGGGCAGAATCAGCTGTTACAGCCCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGCACCGAGGCTGCTaGGGCTCACGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWHRGC*GSRGGL
Trigger: GAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTGGCACCGAGGCTaGTGCGGCTCACGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGWHRG*CGSRGG
Trigger: CCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCGGGAGTGCTGCTCTaGTTCTCTGCGGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPGVLL*FSAAPP
Trigger: TGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACAGGGAACCGGGAGTaGTGCTCTGCTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTGNRE*CSASLR
Trigger: CCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCGGCGGAAGAAGCGGTaGTCAGTGGTGGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRRKKR*SVVVVV
Trigger: GACCACTACCACCACTGAGCACCGCTTCTTCCGCCG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCGGTGGAGCACTCTaGGGGACAGCCGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSGGAL*GTAAGM
Trigger: CATCCCCGCGGCTGTCCCGCAGAGTGCTCCACCGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGTCTTTGCTGGTACTaGTGGGGACAGTCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGLCWY*WGQSRG
Trigger: CCCCCTCGACTGTCCCCAGCAGTACCAGCAAAGACC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGCTCCTTGGCGCTaGCGCCGCCGCTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVAPWR*RRRCHF
Trigger: GAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGTGCTGTGGCTGCTaGTGTGGTTGGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWCCGC*CGWDSS
Trigger: GCTGGAGTCCCAACCACAGCAGCAGCCACAGCACCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGACTGGTGCTGTGGCTaGTGCTGTGGTTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDDWCCG*CCGWDS
Trigger: GGAGTCCCAACCACAGCAGCAGCCACAGCACCAGTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTCTGTCACCGAAGATaGGGGTGCGGAGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFCHRR*GCGVAE
Trigger: CTCGGCCACTCCGCACCCCCATCTTCGGTGACAGAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGCTGGAGCCATTCTTaGGGGCAGGAGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSWSHS*GQEPAA
Trigger: CGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCTTGTCCATAGTGTaGCGGCGGCGCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSLSIV*RRRLYS
Trigger: GGAGTACAGGCGCCGCCGCCACACTATGGACAAGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCGGTGGGGCTCCGGTaGAGCACTCTGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPVGLR*STLRDS
Trigger: GCTGTCCCGCAGAGTGCTCCACCGGAGCCCCACCGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGCTGCTGGGCTACCTaGGAAGTGGCGGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGCWAT*EVAVAV
Trigger: GACCGCCACCGCCACTTCCCAGGTAGCCCAGCAGCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGGCGGCAGCGGCTaGAGGCTGCTGGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRGGSG*RLLGYL
Trigger: CAGGTAGCCCAGCAGCCTCCAGCCGCTGCCGCCCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTTGCTGGTACTGCTaGGGACAGTCGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLCWYC*GQSRGQ
Trigger: CTGCCCCCTCGACTGTCCCCAGCAGTACCAGCAAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCACAAGGCTAGGCTaGGACACTGGGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPTRLG*DTGRSL
Trigger: CAAAGACCGCCCAGTGTCCCAGCCTAGCCTTGTGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTCCGTTCCTCCTGTaGCTCCTTGGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAPFLL*LLGAAA
Trigger: GGCGGCAGCGCCAAGGAGCCACAGGAGGAACGGAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGAGGCTTAGGACCTaGGGTAGCAGTACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWRLRT*GSSTAP
Trigger: GGGGGCAGTACTGCTACCCCAGGTCCTAAGCCTCCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGTTGGAGCCGCCATaGACACAGGACCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLLEPP*TQDQPQ
Trigger: CTGCGGTTGGTCCTGTGTCCATGGCGGCTCCAACAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGGTGGAGGGTCTGCTaGGGGTGCAAGACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGWRVC*GCKTEA
Trigger: AGCTTCAGTCTTGCACCCCCAGCAGACCCTCCACCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGGCCAAGTGGCTGTaGTGCTGGGCCACCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLAKWL*CWATRP
Trigger: GGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGGAACTGGCCAAGTaGCTGTGGTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLELAK*LWCWAT
Trigger: GGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCTGGGTACTGTGGTaGCAGTCGAGGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSWVLW*QSRWEA
Trigger: GGCTTCCCACCTCGACTGCCACCACAGTACCCAGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGAGGCGCCGCAGTCATaGGGGGAGGGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKEAPQS*GEGQGP
Trigger: CGGCCCCTGGCCCTCCCCTCATGACTGCGGCGCCTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCATTGGAGTCACAGATaGCGCTCCGGCGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHWSHR*RSGGRS
Trigger: GCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAATG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTAGGAAGGCTCTTTaGGCTCAGCTGATGGGGCGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDARKAL*AQLMGR
Trigger: TCGCCCCATCAGCTGAGCTCAAAGAGCCTTCCTAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGGGGGTGCAAGACTaGAGCTGCACTCTGACCAGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLGVQD*SCTLTR
Trigger: TCTGGTCAGAGTGCAGCTTCAGTCTTGCACCCCCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTAGGAACCACAGTTaGTACCCCCGGGATCGCAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTRNHS*YPRDRS
Trigger: GCTGCGATCCCGGGGGTATCAACTGTGGTTCCTAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGCACCGAGGCTGCTaGGGCTCACGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWHRGC*GSRGGL
Trigger: GAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTACTCCTCGGTCCTaGCGGTCACAGCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCTPRS*RSQRRR
Trigger: CCGCCGACGCTGTGACCGGCAGGACCGAGGAGTACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGACAGCCGCGGGGATaGTGGGCTGGGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGQPRG*WAGAGK
Trigger: TTTCCCTGCCCCAGCCCAGCATCCCCGCGGCTGTCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCGGTGGAGCACTCTaGGGGACAGCCGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSGGAL*GTAAGM
Trigger: CATCCCCGCGGCTGTCCCGCAGAGTGCTCCACCGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCAGCGGCTGGAGGCTaGTGGGCTACCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAAAGG*WATWEV
Trigger: CACTTCCCAGGTAGCCCAGCAGCCTCCAGCCGCTGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACACTGGGCGGTCTTTaGTGGTACTGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTLGGL*WYCWGQ
Trigger: CTGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGCCCGCTTCAGGGTTaGCAGACCGAGGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSPLQG*QTEVSN
Trigger: ATTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCTCCCGTACCAACTaGCGCTGCTCTCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSSRTN*RCSRFL
Trigger: GAGGAAACGAGAGCAGCGGCAGTTGGTACGGGAGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTCAGAGCCAAAAGGTaGAGCTGCTCCCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVRAKR*SCSPCR
Trigger: CCTACAGGGGGAGCAGCTGCACCTTTTGGCTCTGAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGGCTCTGCCCCTGTaGCTGTGGATGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLALPL*LWMKCR
Trigger: TCTGCACTTCATCCACAGGCACAGGGGCAGAGCCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTTGCAGGGACTGGTaGTGTGGCTGCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCCRDW*CGCCCG
Trigger: ACCACAGCAGCAGCCACAGCACCAGTCCCTGCAACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGTCTGCTGGGGGTaGAAGACTGAAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRVCWG*KTEAAL
Trigger: GAGTGCAGCTTCAGTCTTGCACCCCCAGCAGACCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCCAAGTGGCTGTGGTaGTGGGCCACCCGTCCCACT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAKWLW*WATRPT
Trigger: AGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATGGGGGTGCGGAGTaGCCGAGAGAGGAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSDGGAE*PREEPR
Trigger: ACGCGGCTCCTCTCTCGGCCACTCCGCACCCCCATC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCGGCGCCGCCAGACATaGTCGGTTCGCTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRRRQT*SVRWRE
Trigger: CTCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGCTGGAGCCATTCTTaGGGGCAGGAGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSWSHS*GQEPAA
Trigger: CGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCTGGGAAGTGGCGGTaGCGGTCACGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPGKWR*RSRSLP
Trigger: GGGAAGAGACCGTGACCGCCACCGCCACTTCCCAGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGGCTACCTGGGAAGTaGCGGTGGCGGTCACGGTCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGLPGK*RWRSRS
Trigger: AGACCGTGACCGCCACCGCCACTTCCCAGGTAGCCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTGCTGGGCTACCTaGGAAGTGGCGGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGCWAT*EVAVAV
Trigger: GACCGCCACCGCCACTTCCCAGGTAGCCCAGCAGCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTAGGCTGGGACACTaGGCGGTCTTTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDARLGH*AVFAGT
Trigger: AGTACCAGCAAAGACCGCCCAGTGTCCCAGCCTAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTCCGTTCCTCCTGTaGCTCCTTGGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAPFLL*LLGAAA
Trigger: GGCGGCAGCGCCAAGGAGCCACAGGAGGAACGGAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTACTGGCGGTGGGGTaGAAGAGCACTGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVLAVG*KSTGRD
Trigger: ATCTCTCCCAGTGCTCTTCCACCCCACCGCCAGTAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTACGCCGCTGGGAAATaGCTACTTTCGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDYAAGK*LLSVGR
Trigger: CCTGCCCACCGAAAGTAGCCATTTCCCAGCGGCGTA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTTGTTGCAGGGACTaGTGCTGTGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDACCRD*CCGCCC
Trigger: ACAGCAGCAGCCACAGCACCAGTCCCTGCAACAAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGGCAGCTGCTCGCTaGGTAGAGTACCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVAAAR*VEYLLE
Trigger: TTCCAGCAGGTACTCTACCCAGCGAGCAGCTGCCAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATTCTGCCCGGACTCTaGGATGTTGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDILPGL*DVARRV
Trigger: CACCCTCCTGGCAACATCCCAGAGTCCGGGCAGAAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATGTGCCCTTCCTGCTaGACGTCATGGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDMCPSC*TSWQEA
Trigger: AGCCTCCTGCCATGACGTCCAGCAGGAAGGGCACAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGCCAAGTGGCTGTaGTGCTGGGCCACCCGTCCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLAKWL*CWATRP
Trigger: GGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCACAGGTTGGAACTaGCCAAGTGGCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPTGWN*PSGCGA
Trigger: AGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCGCAGGTTGGAGCCTaGGGGGTTGCTGATGGATTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPQVGA*GVADGF
Trigger: AAATCCATCAGCAACCCCCCAGGCTCCAACCTGCGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCACACGGATGCGCCATaGACTGAGGCACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHTDAP*TEAHLR
Trigger: CCTCAAGTGTGCCTCAGTCCATGGCGCATCCGTGTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGTGGCAGTCGAGGTaGGAAGCCCTGTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWWQSR*EALFSS
Trigger: GCTGGAAAACAGGGCTTCCCACCTCGACTGCCACCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTCTCCAATCTTGACTaGGCCAGTAGGGCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVSNLD*ASRAGD
Trigger: ATCACCGGCCCTACTGGCTCAGTCAAGATTGGAGAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGACAGAGGATCCCTaGCCACTGTCAACCGTCCCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKTEDP*PLSTVP
Trigger: TGGGACGGTTGACAGTGGTCAGGGATCCTCTGTCTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCGTCGGTGCTTGCGCTaGGAGGCAGAGTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRRCLR*EAECIG
Trigger: GCCTATGCACTCTGCCTCTCAGCGCAAGCACCGACG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGATGCGCCATGGACTaGGGAGTACTGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGCAMD*GVLTKR
Trigger: CCTCTTTGTCAGTACTCCTCAGTCCATGGCGCATCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGGTTGGAAGTGGTaGGTTTGGGCTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRGWKW*VWASRK
Trigger: CTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCACCTCCTTCTCCTaGAGAGGAGCTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSTSFS*RGAWCV
Trigger: CACACACCAAGCTCCTCTTCAGGAGAAGGAGGTGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCAGTTAAGACCTGCTaGGATGTGGTTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAVKTC*DVVPWG
Trigger: CCCCCAAGGAACCACATCTCAGCAGGTCTTAACTGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTACTGCACTGTCTGTTaGGGAGGGGCTGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDYCTVC*GGAVCC
Trigger: ACAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGAGACAGAGGCATGCTaGGCTCCAGATGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDETEAC*APDELC
Trigger: ACACAGCTCATCTGGAGCTCAGCATGCCTCTGTCTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGTTCCTGCTTCTGTaGTTGCTGTTGGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVFLLL*LLLEPP
Trigger: TGGCGGCTCCAACAGCAATCACAGAAGCAGGAACAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTCTTTGAGCTCAGCTaGTGGGGCGAGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLFELS*WGECGL
Trigger: TAGTCCACACTCGCCCCATCAGCTGAGCTCAAAGAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCGTCGTCTTCTCCCTaGAAGGGGAGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSSSSP*KGSSWG
Trigger: CCCCCAGCTGCTCCCCTTTCAGGGAGAAGACGACGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGCTGCTGGTTCCTTaGCCTGGAGCAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVLLVP*PGAERL
Trigger: AAGCCTTTCTGCTCCAGGTCAAGGAACCAGCAGCAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTTCCTCTCCTGCCTaGGAGATTCATGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDASSPA*EIHGIS
Trigger: CGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCACTGGAAGGAAATaGGCACCAGAGTGGACTGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPTGRK*APEWTG
Trigger: TCCAGTCCACTCTGGTGCTCATTTCCTTCCAGTGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGACTGAGGCACACTTaGGGGTGGATATACCCCATG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGLRHT*GWIYPM
Trigger: CATGGGGTATATCCACCCTCAAGTGTGCCTCAGTCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTGCTCTGCTTCTCTaGGGCGCCGCCAGACATGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAALLL*GAARHG
Trigger: ACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGAACCGGGAGTGCTaGTCTGCTTCTCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGNREC*SASLRR
Trigger: GCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTACTCCTCGGTCCTaGCGGTCACAGCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCTPRS*RSQRRR
Trigger: CCGCCGACGCTGTGACCGGCAGGACCGAGGAGTACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGAACACAAACCGACATaGTACGGCCACGACGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDEHKPT*YGHDEA
Trigger: TGCCTCGTCGTGGCCGTAGCATGTCGGTTTGTGTTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTCCAGGAAGGAGGTaGTCTTACGCCGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLPGRR*SYAAGK
Trigger: TTTCCCAGCGGCGTAAGAGCACCTCCTTCCTGGAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGACTCACTGGCTGTaGAGTAGTGGCCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLTHWL*SSGLTG
Trigger: TCCAGTGAGGCCACTACTGCACAGCCAGTGAGTCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGGGTCTGTGCTACTaGAACTGGCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLGLCY*NWLCRS
Trigger: GCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGTAGCTTGGGTCTGTaGTACTGCAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGSLGL*YCNWLC
Trigger: GCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCAAGTGGCTGTGGTaGTGGGCCACCCGTCCCACT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAKWLW*WATRPT
Trigger: AGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACATGGTCGGTTCGCTaGAGAGAGGCGAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTWSVR*REASGL
Trigger: GAGCCCGCTCGCCTCTCTCCAGCGAACCGACCATGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCGGCGCCGCCAGACATaGTCGGTTCGCTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRRRQT*SVRWRE
Trigger: CTCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACGGTCTCTTCCCGGTaGGGCTCCGGTGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTVSSR*GSGGAL
Trigger: GAGTGCTCCACCGGAGCCCCACCGGGAAGAGACCGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCTGGGAAGTGGCGGTaGCGGTCACGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPGKWR*RSRSLP
Trigger: GGGAAGAGACCGTGACCGCCACCGCCACTTCCCAGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGCTACCTGGGAAGTaGCGGTGGCGGTCACGGTCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGLPGK*RWRSRS
Trigger: AGACCGTGACCGCCACCGCCACTTCCCAGGTAGCCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCTCCTGTGGCTCCTTaGCGCTGCCGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPPVAP*RCRRRC
Trigger: GCAGCGGCGGCGGCAGCGCCAAGGAGCCACAGGAGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATATCATCCTGCTGCTaGCTCCGTTCCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDISSCC*LRSSCG
Trigger: GCCACAGGAGGAACGGAGCCAGCAGCAGGATGATAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGTGTCCAGTTAGTTaGGCTGCCACCAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWCPVS*AATRWK
Trigger: CTTCCACCTGGTGGCAGCCCAACTAACTGGACACCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGAGGCTGACTCACTaGCTGTGCAGTAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLRLTH*LCSSGL
Trigger: GAGGCCACTACTGCACAGCCAGTGAGTCAGCCTCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGTGCTACTGCAACTaGCTCTGCAGGAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLCYCN*LCRSNL
Trigger: CAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTCGGCTGGGTAGCTTaGGTCTGTGCTACTGCAACT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVGWVA*VCATAT
Trigger: AGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGCTGCTGCTGTGGTTaGGACTCCAGCAATGCTACT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGCCCG*DSSNAT
Trigger: AGTAGCATTGCTGGAGTCCCAACCACAGCAGCAGCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGATGGGGCGAGTGTaGACTACCGGAACCATCATC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLMGRV*TTGTII
Trigger: GATGATGGTTCCGGTAGTCCACACTCGCCCCATCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCAGGTTCGAGGTCATaGAGATGCACAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPGSRS*RCTVAQ
Trigger: CTGGGCAACTGTGCATCTCCATGACCTCGAACCTGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCAGTTCCCACAGGTTaGAACTGGCCAAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAVPTG*NWPSGC
Trigger: ACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTCTCTAGGTCTAAGTaGTCCGCAGGTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVSRSK*SAGWSL
Trigger: CAGGCTCCAACCTGCGGACCACTTAGACCTAGAGAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGGTGAACCTGACTTaGCAGCTGAGTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWVNLT*QLSHRL
Trigger: CAGCCTGTGACTCAGCTGCCAAGTCAGGTTCACCCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCGAGGTGGGAAGCCCTaGTACAGAACATCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRGGKP*YRTSPE
Trigger: CTCTGGAGATGTTCTGTACCAGGGCTTCCCACCTCG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATCTCCTGGGTACTGTaGTGGCAGTCGAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDISWVL*WQSRWE
Trigger: TTCCCACCTCGACTGCCACCACAGTACCCAGGAGAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTCCGCTGCTTCTCTaGGGCAAGAGGAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAPLLL*GKRRGD
Trigger: GTCTCCTCTCCTCTTGCCTCAGAGAAGCAGCGGAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGCGATTCGGGAGCTaGGCCACGGGGGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGRFGS*ATGVSA
Trigger: GGCGCTAACCCCCGTGGCTCAGCTCCCGAATCGCCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACATCTCAGGGGCCATaGACTCTGGGGTACCTATCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTSQGP*TLGYLS
Trigger: TGATAGGTACCCCAGAGTTCATGGCCCCTGAGATGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCAGGTGGGAGGTGGTaGAAAAGAAACTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAGGRW*KRNWTF
Trigger: GAACGTCCAGTTTCTTTTTCACCACCTCCCACCTGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTAGGGGGAGGTGACTaGAAATCACTGGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVGGGD*KSLGSE
Trigger: TTCAGACCCCAGTGATTTTCAGTCACCTCCCCCTAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTACTTGAGGATGGCTaGCCCTGGCTCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLLEDG*PWLCPC
Trigger: ACAGGGGCAGAGCCAGGGTCAGCCATCCTCAAGTAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATTCCCTGCTGCTGCTaGGGATGTTGTATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDIPCCC*GCCMGW
Trigger: CCAACCCATACAACATCCTCAGCAGCAGCAGGGAAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTATGGGGAGACCACCTaGAGTTACCACACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDYGETT*SYHTCA
Trigger: AGCACAGGTGTGGTAACTTCAGGTGGTCTCCCCATA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGGATGTGGGGACTTaGAGTGACGGGGATGTAGTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVDVGT*SDGDVV
Trigger: TACTACATCCCCGTCACTTCAAGTCCCCACATCCAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGCCTGCTGCCTGCTaGGATACTACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLPAAC*DTTAGG
Trigger: GCCTCCAGCTGTAGTATCTCAGCAGGCAGCAGGCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTGCAAGTCATCTGTaGATGTGCCCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCASHL*MCPSCW
Trigger: CCAGCAGGAAGGGCACATTCACAGATGACTTGCACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTCGCAACTGGGATCTaGGGTTCGCCTTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVATGI*GSPWIV
Trigger: AACTATCCAAGGCGAACCTCAGATCCCAGTTGCGAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTGATGGGAAGGGATaGGAAACCTGTCTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCDGKG*ETCLSR
Trigger: ACGGCTCAGACAGGTTTCTCATCCCTTCCCATCACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAACTTCGCACAGCCTTaGCCTGGAGCAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNFAQP*PGAERL
Trigger: AAGCCTTTCTGCTCCAGGTCAAGGCTGTGCGAAGTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGCCCGAGCTCCGCTaGTTCTCTGAGGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGPELR*FSEARG
Trigger: TCCTCTTGCCTCAGAGAAGCAGCGGAGCTCGGGCCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR GCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCGAGTCGAGGCGGATaGGGCGGACGCGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPPSRGG*GGRGSH
Trigger: GTGGGAGCCGCGTCCGCCGCATCCGCCTCGACTCGG...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGCTGGCACCGAGGCTaGTGCGGCTCACGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGWHRG*CGSRGG
Trigger: CCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGCTCTGCTTCTCTaGGGCGCCGCCAGACATGGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAALLL*GAARHG
Trigger: ACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACAGGGAACCGGGAGTaGTGCTCTGCTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTGNRE*CSASLR
Trigger: CCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCGGCGGAAGAAGCGGTaGTCAGTGGTGGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRRKKR*SVVVVV
Trigger: GACCACTACCACCACTGAGCACCGCTTCTTCCGCCG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTCTTTGCTGGTACTaGTGGGGACAGTCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGLCWY*WGQSRG
Trigger: CCCCCTCGACTGTCCCCAGCAGTACCAGCAAAGACC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGGCTCCTTGGCGCTaGCGCCGCCGCTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVAPWR*RRRCHF
Trigger: GAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCGATATCATCCTGCTaGTGGCTCCGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSISSC*WLRSSC
Trigger: ACAGGAGGAACGGAGCCAGCAGCAGGATGATATCGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTTCGATATCATCCTaGTGCTGGCTCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSSISS*CWLRSS
Trigger: GGAGGAACGGAGCCAGCAGCAGGATGATATCGAAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDYCNWL*RSNLRD
Trigger: GTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGTGCTGTGGCTGCTaGTGTGGTTGGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWCCGC*CGWDSS
Trigger: GCTGGAGTCCCAACCACAGCAGCAGCCACAGCACCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGACTGGTGCTGTGGCTaGTGCTGTGGTTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLDWCCG*CCGWDS
Trigger: GGAGTCCCAACCACAGCAGCAGCCACAGCACCAGTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTAGTGCTGCCTGCTaGCTGCTGAGATACTACAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSSAAC*LLRYYS
Trigger: GCTGTAGTATCTCAGCAGGCAGCAGGCAGCACTACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCACAGTAGTGCTGCCTaGTGCCTGCTGAGATACTAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHSSAA*CLLRYY
Trigger: GTAGTATCTCAGCAGGCAGCAGGCAGCACTACTGTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTGGGGTAGAAACTTaGCCAGGTGTGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTGVET*PGVTTG
Trigger: ACCAGTGGTCACACCTGGGCAAGTTTCTACCCCAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCTGCTTCTGTGATTaGTGTTGGAGCCGCCATGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSCFCD*CWSRHG
Trigger: TCCATGGCGGCTCCAACAGCAATCACAGAAGCAGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGGGCACCGTCTGCTaGAACAGAAACCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLGTVC*NRNLKS
Trigger: CGATTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGCAGGGGGCACCTTaGCCAGTTTGGTATACAAAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQQGAP*PVWYTK
Trigger: CTTTGTATACCAAACTGGGCAAGGTGCCCCCTGCTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCCAACAGTGTTTGTaGTGCTGGTTCCTTGACCTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPQQCL*CWFLDL
Trigger: CAGGTCAAGGAACCAGCAGCACAAACACTGTTGGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCACAGTTGCCCAGGTaGAGAGAACTTCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAQLPR*RELPCH
Trigger: ATGGCAAGGAAGTTCTCTGCACCTGGGCAACTGTGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTTGGCATAACCACTaGTGGACTGCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLWHNH*WTAGVT
Trigger: TGTGACCCCAGCAGTCCAGCAGTGGTTATGCCAAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTCTCCAAAACTGCTTaGTGGGAGGATGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSKTA*WEDVVG
Trigger: CCCCACTACATCCTCCCAGCAAGCAGTTTTGGAGAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACGCGCCCCCAGCGATaGGGACCGGCCTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTRPQR*GPASQV
Trigger: GACCTGTGAGGCCGGTCCCCATCGCTGGGGGCGCGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCTTGTCCATAGTGTaGCGGCGGCGCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSLSIV*RRRLYS
Trigger: GGAGTACAGGCGCCGCCGCCACACTATGGACAAGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCACAAGGCTAGGCTaGGACACTGGGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPTRLG*DTGRSL
Trigger: CAAAGACCGCCCAGTGTCCCAGCCTAGCCTTGTGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTCCTGTGGCTCCTTaGCGCTGCCGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPPPVAP*RCRRRC
Trigger: GCAGCGGCGGCGGCAGCGCCAAGGAGCCACAGGAGG...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGCGACTTCCACGGTaGTTTCAGTGTCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRRLPR*FQCPDL
Trigger: AAGGTCTGGACACTGAAACCACCGTGGAAGTCGCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGCTCTTACGCCGCTaGGAAATGGCTACTTTCGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVLLRR*EMATFG
Trigger: ACCGAAAGTAGCCATTTCCCAGCGGCGTAAGAGCAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGCCCCCTTGTACTaGCTTCTGTTCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRAPLY*LLFRYL
Trigger: CAGATACCTGAACAGAAGCCAGTACAAGGGGGCCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCCTGATCACCCTCTaGTTCCACACTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSLITL*FHTDIL
Trigger: GAGGATGTCAGTGTGGAACCAGAGGGTGATCAGGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTACCACACCTGTGCTaGTGGCAACTCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLPHLC*WQLQQS
Trigger: GGATTGCTGGAGTTGCCACCAGCACAGGTGTGGTAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTCAGATGTGGATGTaGGGACTTGAAGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSQMWM*GLEVTG
Trigger: CCCCGTCACTTCAAGTCCCCACATCCACATCTGAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTACAGCAGGCACATTaGCAACAGGCTGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVQQAH*QQAVPR
Trigger: CCTTGGTACAGCCTGTTGCCAATGTGCCTGCTGTAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCAGGTGTGACCACTaGTGTAACTGGCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPRCDH*CNWQSN
Trigger: GTTGCTTTGCCAGTTACACCAGTGGTCACACCTGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGTTCAGTACCCACTaGCAGCACCGGAGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKFSTH*QHRSLS
Trigger: ACTAAGGCTCCGGTGCTGCCAGTGGGTACTGAACTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGTTGGAGCCGCCATaGACACAGGACCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLLEPP*TQDQPQ
Trigger: CTGCGGTTGGTCCTGTGTCCATGGCGGCTCCAACAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTCTGTGATTGCTGTTaGAGCCGCCATGGACACAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFCDCC*SRHGHR
Trigger: CCTGTGTCCATGGCGGCTCCAACAGCAATCACAGAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGGTGGAGGGTCTGCTaGGGGTGCAAGACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGWRVC*GCKTEA
Trigger: AGCTTCAGTCTTGCACCCCCAGCAGACCCTCCACCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGTGTTTGTGCTGCTaGTTCCTTGACCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQCLCC*FLDLEQ
Trigger: CTGCTCCAGGTCAAGGAACCAGCAGCACAAACACTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCCAAATGGGGTAGCTaGAAAGCCATACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAKWGS*KAILLW
Trigger: CCACAGCAGTATGGCTTTCCAGCTACCCCATTTGGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAGTGGCTGTGGTGCTaGGCCACCCGTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSKWLWC*ATRPTP
Trigger: TGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGGAACTGGCCAAGTaGCTGTGGTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLELAK*LWCWAT
Trigger: GGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGCACCAGAGTGGACTaGAACAACCGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSTRVD*NNRGLC
Trigger: ACACAACCCTCGGTTGTTCCAGTCCACTCTGGTGCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGCTGCAGAAGGGTTaGAAGCTGACTAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRLQKG*KLTRNH
Trigger: GTGGTTCCTAGTCAGCTTCCAACCCTTCTGCAGCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCTGGGTACTGTGGTaGCAGTCGAGGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSWVLW*QSRWEA
Trigger: GGCTTCCCACCTCGACTGCCACCACAGTACCCAGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCAAAACTGCTTGCTaGGAGGATGTAGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSKTAC*EDVVGA
Trigger: AGCCCCCACTACATCCTCCCAGCAAGCAGTTTTGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTCCGCTGCTTCTCTaGGGCAAGAGGAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAPLLL*GKRRGD
Trigger: GTCTCCTCTCCTCTTGCCTCAGAGAAGCAGCGGAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR TCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTGGGCGATTCGGGAGCTaGGCCACGGGGGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPGRFGS*ATGVSA
Trigger: GGCGCTAACCCCCGTGGCTCAGCTCCCGAATCGCCC...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCATTGGAGTCACAGATaGCGCTCCGGCGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLHWSHR*RSGGRS
Trigger: GCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAATG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCACTCGAGATTCTGTaGAGACAGAGGATCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSLEIL*RQRIPD
Trigger: GTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTACTTGAGGATGGCTaGCCCTGGCTCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLEDG*PWLCPC
Trigger: ACAGGGGCAGAGCCAGGGTCAGCCATCCTCAAGTAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGATGATGCAGAGTaGGACAAGTTCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRDDAE*DKFIPG
Trigger: CCCTGGAATGAACTTGTCTCACTCTGCATCATCCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGCCTGCTGCCTGCTaGGATACTACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLPAAC*DTTAGG
Trigger: GCCTCCAGCTGTAGTATCTCAGCAGGCAGCAGGCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTATCACTGATGGAATaGCCAAAGGATGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSLME*PKDAAH
Trigger: GTGGGCTGCATCCTTTGGTCATTCCATCAGTGATAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTACTTCAGGACAATaGGTATGGGGCTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSTSGQ*VWGWLG
Trigger: TCCCAACCAGCCCCATACTCATTGTCCTGAAGTAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCAGGTTTCACTCCTaGTGTAGTAGTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSRFHS*CSSADW
Trigger: CCAGTCAGCACTACTACATCAGGAGTGAAACCTGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTCTCTGGCACATCTaGAGAGATACCAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTLWHI*RDTRDG
Trigger: ACCATCCCTGGTATCTCTTCAGATGTGCCAGAGAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTAGGAAGGCTCTTTaGGCTCAGCTGATGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLARKAL*AQLMGR
Trigger: TCGCCCCATCAGCTGAGCTCAAAGAGCCTTCCTAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTGAAGCTGCACTCTaGCCAGACAGGTTACCTGAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTEAAL*PDRLPE
Trigger: TTCAGGTAACCTGTCTGGTCAGAGTGCAGCTTCAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGGCTGTAACAGCTaGTTCTGCCCGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRGCNS*FCPDSG
Trigger: CCCAGAGTCCGGGCAGAATCAGCTGTTACAGCCCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGCACCATCACTGGTaGAGGCTGAATAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWHHHW*RLNRGC
Trigger: ACAACCTCTATTCAGCCTTCACCAGTGATGGTGCCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCGTCCCACTCCATTaGGCGCCAAATGGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPVPLH*APNGVA
Trigger: AGCTACCCCATTTGGCGCTCAATGGAGTGGGACGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGTGGTGGTGGTGGTaGTTCCCAGAATATGCCATT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWWWWW*FPEYAI
Trigger: AATGGCATATTCTGGGAATCACCACCACCACCACCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTAGGAACCACAGTTaGTACCCCCGGGATCGCAGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTRNHS*YPRDRS
Trigger: GCTGCGATCCCGGGGGTATCAACTGTGGTTCCTAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCTGGCTGGGACACTTaGACCTGTCCTCCTACACCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPGWDT*TCPPTP
Trigger: TGGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGATGCGCCATGGACTaGGGCACACTTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGCAMD*GTLEGG
Trigger: TCCACCCTCAAGTGTGCCTCAGTCCATGGCGCATCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCTGCCACCAGGTTTaGATGTCACCTGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSCHQV*MSPVQM
Trigger: CATCTGAACAGGTGACATTCAAACCTGGTGGCAGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGCACCGAGGCTGCTaGGGCTCACGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWHRGC*GSRGGL
Trigger: GAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGGGCTGGCACCGAGGCTaGTGCGGCTCACGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKGWHRG*CGSRGG
Trigger: CCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCC...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCGGGAGTGCTGCTCTaGTTCTCTGCGGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPGVLL*FSAAPP
Trigger: TGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACAGGGAACCGGGAGTaGTGCTCTGCTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTGNRE*CSASLR
Trigger: CCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCGGCGGAAGAAGCGGTaGTCAGTGGTGGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRRKKR*SVVVVV
Trigger: GACCACTACCACCACTGAGCACCGCTTCTTCCGCCG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGACAGCCGCGGGGATaGTGGGCTGGGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGQPRG*WAGAGK
Trigger: TTTCCCTGCCCCAGCCCAGCATCCCCGCGGCTGTCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCGGTGGAGCACTCTaGGGGACAGCCGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSGGAL*GTAAGM
Trigger: CATCCCCGCGGCTGTCCCGCAGAGTGCTCCACCGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACACTGGGCGGTCTTTaGTGGTACTGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTLGGL*WYCWGQ
Trigger: CTGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCGTGGCTCCTTGGCGCTaGCGCCGCCGCTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFVAPWR*RRRCHF
Trigger: GAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCAC...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGCCCGCTTCAGGGTTaGCAGACCGAGGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSPLQG*QTEVSN
Trigger: ATTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCTCCCGTACCAACTaGCGCTGCTCTCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSSRTN*RCSRFL
Trigger: GAGGAAACGAGAGCAGCGGCAGTTGGTACGGGAGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGAGCGTCGGTGCTTaGGCTGAGAGGCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWSVGA*AERQSA
Trigger: TGCACTCTGCCTCTCAGCGCAAGCACCGACGCTCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGTGCTGTGGCTGCTaGTGTGGTTGGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWCCGC*CGWDSS
Trigger: GCTGGAGTCCCAACCACAGCAGCAGCCACAGCACCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTTGCAGGGACTGGTaGTGTGGCTGCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCCRDW*CGCCCG
Trigger: ACCACAGCAGCAGCCACAGCACCAGTCCCTGCAACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGTTACCACACCTGTaGTGGTGGCAACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKLPHL*WWQLQQ
Trigger: TTGCTGGAGTTGCCACCAGCACAGGTGTGGTAACTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACAGCTGTGAAGCTGTaGTTGGGAATGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTAVKL*LGMKWW
Trigger: CCACCACTTCATTCCCAAGCACAGCTTCACAGCTGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGGTCTGCTGGGGGTaGAAGACTGAAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRVCWG*KTEAAL
Trigger: GAGTGCAGCTTCAGTCTTGCACCCCCAGCAGACCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAACAGTGTTTGTGCTaGTGGTTCCTTGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQQCLC*WFLDLE
Trigger: CTCCAGGTCAAGGAACCAGCAGCACAAACACTGTTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGAGTAATGCCAGCTaGCATTGTGATGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSNAS*HCDGKG
Trigger: TCCCTTCCCATCACAATGGCAGCTGGCATTACTCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGATGGGGGTGCGGAGTaGCCGAGAGAGGAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDGGAE*PREEPR
Trigger: ACGCGGCTCCTCTCTCGGCCACTCCGCACCCCCATC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGCTGGAGCCATTCTTaGGGGCAGGAGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSWSHS*GQEPAA
Trigger: CGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTCCGGTGGGGCTCCGGTaGAGCACTCTGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITPVGLR*STLRDS
Trigger: GCTGTCCCGCAGAGTGCTCCACCGGAGCCCCACCGG...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGCTGCTGGGCTACCTaGGAAGTGGCGGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGCWAT*EVAVAV
Trigger: GACCGCCACCGCCACTTCCCAGGTAGCCCAGCAGCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGAGGGGCGGCAGCGGCTaGAGGCTGCTGGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKRGGSG*RLLGYL
Trigger: CAGGTAGCCCAGCAGCCTCCAGCCGCTGCCGCCCCT...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCACAAGGCTAGGCTaGGACACTGGGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPTRLG*DTGRSL
Trigger: CAAAGACCGCCCAGTGTCCCAGCCTAGCCTTGTGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTCCGTTCCTCCTGTaGCTCCTTGGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAPFLL*LLGAAA
Trigger: GGCGGCAGCGCCAAGGAGCCACAGGAGGAACGGAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGGCTTCACCCCACTaGTCACGCGACGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLASPH*SRDGRS
Trigger: AGATCTACCGTCGCGTGACCAGTGGGGTGAAGCCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTTGTCAAAACTGGCTaGCTTCACCCCACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFVKTG*LHPTGH
Trigger: GTGACCAGTGGGGTGAAGCCAGCCAGTTTTGACAAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTACTTTGTCAAAACTaGCTGGCTTCACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLLCQN*LASPHW
Trigger: CCAGTGGGGTGAAGCCAGCCAGTTTTGACAAAGTAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTTCGGTGGGCAGGTaGGAGGTGGTGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSVGR*EVVKKK
Trigger: TTTCTTTTTCACCACCTCCCACCTGCCCACCGAAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTACGCCGCTGGGAAATaGCTACTTTCGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYAAGK*LLSVGR
Trigger: CCTGCCCACCGAAAGTAGCCATTTCCCAGCGGCGTA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCATAACTACGGCCTCTaGTGTCCAGTTAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHNYGL*CPVSWA
Trigger: AGCCCAACTAACTGGACACCAGAGGCCGTAGTTATG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTCTGGGCTTCCTATTaGCCAGTTCTGTCCGATAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFWASY*PVLSDR
Trigger: CCTATCGGACAGAACTGGCCAATAGGAAGCCCAGAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGACCTGCTGAGATGTaGTTCCTTGGGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRPAEM*FLGGNR
Trigger: TCTGTTTCCCCCAAGGAACCACATCTCAGCAGGTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGAGGCAAGACTTGTaGAGCTTGAGGCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLRQDL*SLRLTH
Trigger: GTGAGTCAGCCTCAAGCTCCACAAGTCTTGCCTCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCCAAAGTGGTCGGCTaGGTAGCTTGGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAKVVG*VAWVCA
Trigger: AGCACAGACCCAAGCTACCCAGCCGACCACTTTGGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCTTCCACTGGAAGATaGGACGTTCTCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPSTGR*DVLIAI
Trigger: GATGGCAATGAGAACGTCCCATCTTCCAGTGGAAGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGGAGGTGCTGTGTTaGGTCCTTCTGTCATTTGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLEVLC*VLLSFG
Trigger: CCCAAATGACAGAAGGACCCAACACAGCACCTCCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGACACAGGTGGTATaGGGAGACCACCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQTQVV*GDHLKL
Trigger: TAACTTCAGGTGGTCTCCCCATACCACCTGTGTCTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGAGGCTTAGGACCTaGGGTAGCAGTACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWRLRT*GSSTAP
Trigger: GGGGGCAGTACTGCTACCCCAGGTCCTAAGCCTCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGCAACAGCAGTAGTTaGGATGCCTGGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCNSSS*DAWCDS
Trigger: ACTGTCACACCAGGCATCCCAACTACTGCTGTTGCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTAGTAGTGCTGACTaGGGTAGAAACTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCSSAD*GRNLPR
Trigger: CCTGGGCAAGTTTCTACCCCAGTCAGCACTACTACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGGCAGCTGCTCGCTaGGTAGAGTACCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVAAAR*VEYLLE
Trigger: TTCCAGCAGGTACTCTACCCAGCGAGCAGCTGCCAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCTCTAGAGGTTGCTaGGACTGGGTTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSSRGC*DWVREG
Trigger: ACCTTCTCTAACCCAGTCCCAGCAACCTCTAGAGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGTTGGAGCCGCCATaGACACAGGACCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLEPP*TQDQPQ
Trigger: CTGCGGTTGGTCCTGTGTCCATGGCGGCTCCAACAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTGGAGGGTCTGCTaGGGGTGCAAGACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGWRVC*GCKTEA
Trigger: AGCTTCAGTCTTGCACCCCCAGCAGACCCTCCACCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATTCTGCCCGGACTCTaGGATGTTGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLILPGL*DVARRV
Trigger: CACCCTCCTGGCAACATCCCAGAGTCCGGGCAGAAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGCCTGAGAGATTCATaGCATCTCGGGCCCAATTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCLRDS*HLGPNC
Trigger: ACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAAGCCATACTGCTGTaGGGGGCACATAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKAILL*GAHRLG
Trigger: ACCAAGTCTATGTGCCCCCCACAGCAGTATGGCTTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCATTGAGCGCCAAATaGGGTAGCTGGAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPLSAK*GSWKAI
Trigger: TATGGCTTTCCAGCTACCCCATTTGGCGCTCAATGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGGCCAAGTGGCTGTaGTGCTGGGCCACCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLAKWL*CWATRP
Trigger: GGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGGAACTGGCCAAGTaGCTGTGGTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLELAK*LWCWAT
Trigger: GGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCACAGGTTGGAACTaGCCAAGTGGCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPTGWN*PSGCGA
Trigger: AGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCGCAGGTTGGAGCCTaGGGGGTTGCTGATGGATTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPQVGA*GVADGF
Trigger: AAATCCATCAGCAACCCCCCAGGCTCCAACCTGCGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGAGAGCCCAGTAGGTaGTTTTTGTCCTGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDREPSR*FLSCGS
Trigger: CGAACCACAGGACAAAAACCACCTACTGGGCTCTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTGCTGGGGTCACATaGACCTACGATTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTAGVT*TYDFLP
Trigger: TGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCTGGGTACTGTGGTaGCAGTCGAGGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSWVLW*QSRWEA
Trigger: GGCTTCCCACCTCGACTGCCACCACAGTACCCAGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCATTGGAGTCACAGATaGCGCTCCGGCGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSHWSHR*RSGGRS
Trigger: GCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAATG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTCTCCAATCTTGACTaGGCCAGTAGGGCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVSNLD*ASRAGD
Trigger: ATCACCGGCCCTACTGGCTCAGTCAAGATTGGAGAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAGACAGAGGATCCCTaGCCACTGTCAACCGTCCCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKTEDP*PLSTVP
Trigger: TGGGACGGTTGACAGTGGTCAGGGATCCTCTGTCTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTCAAAGACAGAACTTaGAGTAGGGCCCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFKDRT*SRAPLY
Trigger: GTACAAGGGGGCCCTACTTCAAGTTCTGTCTTTGAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGCTCTCATTGTTATaGGTTAACACAGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLLSLL*VNTAGA
Trigger: TGCGCCTGCTGTGTTAACTCATAACAATGAGAGCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCAGTTAAGACCTGCTaGGATGTGGTTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAVKTC*DVVPWG
Trigger: CCCCCAAGGAACCACATCTCAGCAGGTCTTAACTGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCTGTGCCTGTGGATaGAGTGCAGATCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPCACG*SADPPE
Trigger: TTCAGGAGGATCTGCACTTCATCCACAGGCACAGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTACTGCACTGTCTGTTaGGGAGGGGCTGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYCTVC*GGAVCC
Trigger: ACAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTTCCAGCTGATACTTaGGGCAAGACTTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFPADT*GKTCGA
Trigger: AGCTCCACAAGTCTTGCCTCAAGTATCAGCTGGAAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTGGGGACTTGAAGTaGCGGGGATGTAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCGDLK*RGCSRY
Trigger: ATATCTACTACATCCCCGTCACTTCAAGTCCCCACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATGAGCTGTGTTCACTaGACAGAGACCGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDMSCVH*TETAAF
Trigger: AAAAGCTGCGGTCTCTGTTCAGTGAACACAGCTCAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAGACAGAGGCATGCTaGGCTCCAGATGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLETEAC*APDELC
Trigger: ACACAGCTCATCTGGAGCTCAGCATGCCTCTGTCTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGTTCCTGCTTCTGTaGTTGCTGTTGGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVFLLL*LLLEPP
Trigger: TGGCGGCTCCAACAGCAATCACAGAAGCAGGAACAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTGTAGTTGTCACCTaGAAACGTCCAACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAVVVT*KRPTLV
Trigger: TACCAAGGTTGGACGTTTTCAGGTGACAACTACAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTCTTTGAGCTCAGCTaGTGGGGCGAGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLFELS*WGECGL
Trigger: TAGTCCACACTCGCCCCATCAGCTGAGCTCAAAGAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTAGGAAGGCTCTTTaGGCTCAGCTGATGGGGCGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSARKAL*AQLMGR
Trigger: TCGCCCCATCAGCTGAGCTCAAAGAGCCTTCCTAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACCAGACAGGTTACCTaGAAGCTGGGGGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTRQVT*KLGAFI
Trigger: AATAAAAGCCCCCAGCTTTCAGGTAACCTGTCTGGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGGGGTGCAAGACTaGAGCTGCACTCTGACCAGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLGVQD*SCTLTR
Trigger: TCTGGTCAGAGTGCAGCTTCAGTCTTGCACCCCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATCACTGGTGAAGGCTaGATAGAGGTTGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDITGEG*IEVVTG
Trigger: TCCAGTGACAACCTCTATTCAGCCTTCACCAGTGAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGAAAGGCTTGGTACTaGAATGGCACCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRKAWY*NGTITG
Trigger: ACCAGTGATGGTGCCATTTCAGTACCAAGCCTTTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGCTGCTGGTTCCTTaGCCTGGAGCAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVLLVP*PGAERL
Trigger: AAGCCTTTCTGCTCCAGGTCAAGGAACCAGCAGCAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCACTGGAAGGAAATaGGCACCAGAGTGGACTGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPTGRK*APEWTG
Trigger: TCCAGTCCACTCTGGTGCTCATTTCCTTCCAGTGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGAAGGGTTGGAAGCTaGCTAGGAACCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRRVGS*LGTTVD
Trigger: ATCAACTGTGGTTCCTAGTCAGCTTCCAACCCTTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCTGGCTGGGACACTTaGACCTGTCCTCCTACACCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPGWDT*TCPPTP
Trigger: TGGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGACTGAGGCACACTTaGGGGTGGATATACCCCATG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGLRHT*GWIYPM
Trigger: CATGGGGTATATCCACCCTCAAGTGTGCCTCAGTCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGTGGCACCGAGGCTGCTaGGGCTCACGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKWHRGC*GSRGGL
Trigger: GAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCA...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGCCGGGAGTGCTGCTCTaGTTCTCTGCGGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKPGVLL*FSAAPP
Trigger: TGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGG...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGAACCGGGAGTGCTaGTCTGCTTCTCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGNREC*SASLRR
Trigger: GCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTACTCCTCGGTCCTaGCGGTCACAGCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCTPRS*RSQRRR
Trigger: CCGCCGACGCTGTGACCGGCAGGACCGAGGAGTACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTGGACAGCCGCGGGGATaGTGGGCTGGGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITGQPRG*WAGAGK
Trigger: TTTCCCTGCCCCAGCCCAGCATCCCCGCGGCTGTCC...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCTCCGGTGGAGCACTCTaGGGGACAGCCGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFSGGAL*GTAAGM
Trigger: CATCCCCGCGGCTGTCCCGCAGAGTGCTCCACCGGA...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCAGCGGCTGGAGGCTaGTGGGCTACCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAAAGG*WATWEV
Trigger: CACTTCCCAGGTAGCCCAGCAGCCTCCAGCCGCTGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACACTGGGCGGTCTTTaGTGGTACTGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTLGGL*WYCWGQ
Trigger: CTGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCGTACCAACTGCCGCTaGTCTCGTTTCCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRTNCR*SRFLLI
Trigger: AATTAAGAGGAAACGAGAGCAGCGGCAGTTGGTACG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTGCCTGTAGAATGTaGCTGTTCATGTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCACRM*LFMLGT
Trigger: GGTTCCCAACATGAACAGGCACATTCTACAGGCACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACAGTAGAAGGTATATaGCCTGGGACTGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTVEGI*PGTVPV
Trigger: TACAGGCACAGTCCCAGGGCATATACCTTCTACTGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATGGGGCTGAGACTGTaGTTGGACAGTAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDMGLRL*LDSRRY
Trigger: ATACCTTCTACTGTCCAAGCACAGTCTCAGCCCCAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCAGAGCCAAAAGGTaGAGCTGCTCCCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVRAKR*SCSPCR
Trigger: CCTACAGGGGGAGCAGCTGCACCTTTTGGCTCTGAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGCTCTGCCCCTGTaGCTGTGGATGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLALPL*LWMKCR
Trigger: TCTGCACTTCATCCACAGGCACAGGGGCAGAGCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGACTCACTGGCTGTaGAGTAGTGGCCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLTHWL*SSGLTG
Trigger: TCCAGTGAGGCCACTACTGCACAGCCAGTGAGTCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGGGTCTGTGCTACTaGAACTGGCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLGLCY*NWLCRS
Trigger: GCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTAGCTTGGGTCTGTaGTACTGCAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGSLGL*YCNWLC
Trigger: GCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTAGTTCTTCCTTCATaGCTTCCACTGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVVLPS*LPLEDG
Trigger: CCCATCTTCCAGTGGAAGGCATGAAGGAAGAACTAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTAGGAATGCCTATTTaGTGTGGCATGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVGMPI*CGMEDA
Trigger: TGCGTCTTCCATGCCACAGCAAATAGGCATTCCTAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGAAGTAGGTCCTGCTaGTTGGGGAAGAATAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRSRSC*LGKNRS
Trigger: ACTCCTATTCTTCCCCAAGCAGCAGGACCTACTTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTAGAAGTAGGTCCTaGTGCTTGGGGAAGAATAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCRSRS*CLGKNR
Trigger: CCTATTCTTCCCCAAGCAGCAGGACCTACTTCTACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGGAGTTTGCTTGGTaGAACAGCAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQEFAW*NSSSWD
Trigger: ATCCCAACTACTGCTGTTGCACCAAGCAAACTCCTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGAAAAGGTGGCAGCTaGTCGCTGGGTAGAGTACCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGKGGS*SLGRVP
Trigger: AGGTACTCTACCCAGCGAGCAGCTGCCACCTTTTCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTTCTGGGCACCGTCTaGTGCAACAGAAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFLGTV*CNRNLK
Trigger: TTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAGAAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCAACCTTGGTAGGCTaGCCAGTGTCTGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPTLVG*PVSDFA
Trigger: GGCAAAGTCAGACACTGGGCAGCCTACCAAGGTTGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGTCTGCTGGGGGTaGAAGACTGAAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRVCWG*KTEAAL
Trigger: GAGTGCAGCTTCAGTCTTGCACCCCCAGCAGACCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGGCTGTTCACTGTTaGCCCAACAGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLAVHC*PNSVCA
Trigger: AGCACAAACACTGTTGGGGCAACAGTGAACAGCCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAATTCATGTGCCCTTTaGTTCCTCTCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNSCAL*FLSCLR
Trigger: TCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCCAAGTGGCTGTGGTaGTGGGCCACCCGTCCCACT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAKWLW*WATRPT
Trigger: AGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACGGCGCCGCCAGACATaGTCGGTTCGCTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRRRQT*SVRWRE
Trigger: CTCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTAGCTGGAGCCATTCTTaGGGGCAGGAGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPSWSHS*GQEPAA
Trigger: CGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCT...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACGGTCTCTTCCCGGTaGGGCTCCGGTGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTVSSR*GSGGAL
Trigger: GAGTGCTCCACCGGAGCCCCACCGGGAAGAGACCGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCTGGGAAGTGGCGGTaGCGGTCACGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPGKWR*RSRSLP
Trigger: GGGAAGAGACCGTGACCGCCACCGCCACTTCCCAGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGCTACCTGGGAAGTaGCGGTGGCGGTCACGGTCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGLPGK*RWRSRS
Trigger: AGACCGTGACCGCCACCGCCACTTCCCAGGTAGCCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGGGCTGCTGGGCTACCTaGGAAGTGGCGGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKGCWAT*EVAVAV
Trigger: GACCGCCACCGCCACTTCCCAGGTAGCCCAGCAGCC...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTGCTCCGTTCCTCCTGTaGCTCCTTGGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPAPFLL*LLGAAA
Trigger: GGCGGCAGCGCCAAGGAGCCACAGGAGGAACGGAGC...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATATCATCCTGCTGCTaGCTCCGTTCCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLISSCC*LRSSCG
Trigger: GCCACAGGAGGAACGGAGCCAGCAGCAGGATGATAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGCTTCACCCCACTaGTCACGCGACGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLASPH*SRDGRS
Trigger: AGATCTACCGTCGCGTGACCAGTGGGGTGAAGCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGTCTGGGAAGCACTaGATTGTTCTACCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSGKH*IVLPAV
Trigger: AACAGCAGGTAGAACAATCCAGTGCTTCCCAGACAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGCCCCTGTGCCTGTaGATGAAGTGCAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLPLCL*MKCRSS
Trigger: GGAGGATCTGCACTTCATCCACAGGCACAGGGGCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTGAGGATGTTGTATaGGTTGGGAAGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAEDVV*VGKMKP
Trigger: GGGTTTCATCTTCCCAACCCATACAACATCCTCAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGAGGCTGACTCACTaGCTGTGCAGTAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLRLTH*LCSSGL
Trigger: GAGGCCACTACTGCACAGCCAGTGAGTCAGCCTCAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGTGCTACTGCAACTaGCTCTGCAGGAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLCYCN*LCRSNL
Trigger: CAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTCATGCCTTCCACTaGAAGATGGGACGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLHAFH*KMGRSH
Trigger: ATGAGAACGTCCCATCTTCCAGTGGAAGGCATGAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGCTGCTGCTGTGGTTaGGACTCCAGCAATGCTACT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGCCCG*DSSNAT
Trigger: AGTAGCATTGCTGGAGTCCCAACCACAGCAGCAGCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTTGTTGCAGGGACTaGTGCTGTGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSACCRD*CCGCCC
Trigger: ACAGCAGCAGCCACAGCACCAGTCCCTGCAACAAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCACACCTGTGCTGGTaGCAACTCCAGCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPHLCW*QLQQSP
Trigger: AGGGGATTGCTGGAGTTGCCACCAGCACAGGTGTGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTAGGTCCTGCTGCTTaGGGAAGAATAGGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVGPAA*GRIGVE
Trigger: TTCTACTCCTATTCTTCCCCAAGCAGCAGGACCTAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTAGTTGGGATGCCTaGTGTGACAGTGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSSWDA*CDSALY
Trigger: ATAGAGAGCACTGTCACACCAGGCATCCCAACTACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTCAGGAGTTTGCTTaGTGCAACAGCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSQEFA*CNSSSW
Trigger: CCAACTACTGCTGTTGCACCAAGCAAACTCCTGACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGCAGCTGCTCGCTaGGTAGAGTACCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVAAAR*VEYLLE
Trigger: TTCCAGCAGGTACTCTACCCAGCGAGCAGCTGCCAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTTTTACCCTCTTTCTaGGCACCGTCTGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFLPSF*APSAAT
Trigger: TGTTGCAGCAGACGGTGCCCAGAAAGAGGGTAAAAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTATGCCATTCGGCTCTaGTTTCACCAAGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDYAIRL*FHQGTL
Trigger: GAGAGTACCTTGGTGAAACCAGAGCCGAATGGCATA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGAGATACCAGGGATaGTTATGCCATTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKRYQG*LCHSAL
Trigger: CAGAGCCGAATGGCATAACCATCCCTGGTATCTCTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATTCTGCCCGGACTCTaGGATGTTGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSILPGL*DVARRV
Trigger: CACCCTCCTGGCAACATCCCAGAGTCCGGGCAGAAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATGTGCCCTTCCTGCTaGACGTCATGGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSMCPSC*TSWQEA
Trigger: AGCCTCCTGCCATGACGTCCAGCAGGAAGGGCACAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCAGGTTCGAGGTCATaGAGATGCACAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPGSRS*RCTVAQ
Trigger: CTGGGCAACTGTGCATCTCCATGACCTCGAACCTGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCAGTTCCCACAGGTTaGAACTGGCCAAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAVPTG*NWPSGC
Trigger: ACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTCTCTAGGTCTAAGTaGTCCGCAGGTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVSRSK*SAGWSL
Trigger: CAGGCTCCAACCTGCGGACCACTTAGACCTAGAGAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAGCGGCTGTCCCACTaGAAGGAAATGAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLERLSH*KEMSTR
Trigger: TCTGGTGCTCATTTCCTTCCAGTGGGACAGCCGCTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGGTGAACCTGACTTaGCAGCTGAGTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWVNLT*QLSHRL
Trigger: CAGCCTGTGACTCAGCTGCCAAGTCAGGTTCACCCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATCTCCTGGGTACTGTaGTGGCAGTCGAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLISWVL*WQSRWE
Trigger: TTCCCACCTCGACTGCCACCACAGTACCCAGGAGAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCGCACAGCCTTGACCTaGAGCAGAAAGGCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRTALT*SRKAWY
Trigger: GTACCAAGCCTTTCTGCTCCAGGTCAAGGCTGTGCG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCATTTAAGATCGCGGTaGATGATAGGTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHLRSR*MIGGVR
Trigger: TCGAACTCCACCTATCATTCACCGCGATCTTAAATG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTCCAATCTTGACTaGGCCAGTAGGGCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVSNLD*ASRAGD
Trigger: ATCACCGGCCCTACTGGCTCAGTCAAGATTGGAGAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACATCTCAGGGGCCATaGACTCTGGGGTACCTATCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTSQGP*TLGYLS
Trigger: TGATAGGTACCCCAGAGTTCATGGCCCCTGAGATGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTAGCCATGGTCTTGTaGTCACCTTCACAGACATAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLAMVL*SPSQTY
Trigger: GTATGTCTGTGAAGGTGATCACAAGACCATGGCTAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAGACAGAGGATCCCTaGCCACTGTCAACCGTCCCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSKTEDP*PLSTVP
Trigger: TGGGACGGTTGACAGTGGTCAGGGATCCTCTGTCTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACGACGAGGCACACTTaGGGGTGGATATACCCCATG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTTRHT*GWIYPM
Trigger: CATGGGGTATATCCACCCTCAAGTGTGCCTCGTCGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGACTGAGGAGTACTaGCAAAGAGGGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWTEEY*QRGKAG
Trigger: GCCTGCCTTCCCTCTTTGTCAGTACTCCTCAGTCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGGTTGGAAGTGGTaGGTTTGGGCTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRGWKW*VWASRK
Trigger: CTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGACCTGTATCTCACATaGCTCTCCAGTTACTCTACT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDDLYLT*LSSYST
Trigger: AGTAGAGTAACTGGAGAGTCATGTGAGATACAGGTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCACCTCCTTCTCCTaGAGAGGAGCTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSTSFS*RGAWCV
Trigger: CACACACCAAGCTCCTCTTCAGGAGAAGGAGGTGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTAGGGGGAGGTGACTaGAAATCACTGGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVGGGD*KSLGSE
Trigger: TTCAGACCCCAGTGATTTTCAGTCACCTCCCCCTAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCTGTGCCTGTGGATaGAGTGCAGATCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPCACG*SADPPE
Trigger: TTCAGGAGGATCTGCACTTCATCCACAGGCACAGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATTCCCTGCTGCTGCTaGGGATGTTGTATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLIPCCC*GCCMGW
Trigger: CCAACCCATACAACATCCTCAGCAGCAGCAGGGAAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTACTGCACTGTCTGTTaGGGAGGGGCTGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSYCTVC*GGAVCC
Trigger: ACAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTCATTCCAGGGCTCTaGGCTGTAGAGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFIPGL*AVEAAT
Trigger: AGTTGCTGCCTCTACAGCTCAGAGCCCTGGAATGAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTATGGGGAGACCACCTaGAGTTACCACACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYGETT*SYHTCA
Trigger: AGCACAGGTGTGGTAACTTCAGGTGGTCTCCCCATA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAACTGCAGGTATTGTaGTACTTGAAACTACGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQLQVL*YLKLRW
Trigger: CCAGCGTAGTTTCAAGTATCACAATACCTGCAGTTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGGATGTGGGGACTTaGAGTGACGGGGATGTAGTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVDVGT*SDGDVV
Trigger: TACTACATCCCCGTCACTTCAAGTCCCCACATCCAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTGTCCTCAGTTTTTaGTACAGAGAAACGACCCAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLVLSF*YRETTH
Trigger: GTGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTCTTTGAGCTCAGCTaGTGGGGCGAGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLFELS*WGECGL
Trigger: TAGTCCACACTCGCCCCATCAGCTGAGCTCAAAGAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCGACTCTGCAGGTCCTaGATCTCTTTGAGATGTTTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRLCRS*ISLRCL
Trigger: TAAACATCTCAAAGAGATTCAGGACCTGCAGAGTCG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCGTCGTCTTCTCCCTaGAAGGGGAGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSSSSP*KGSSWG
Trigger: CCCCCAGCTGCTCCCCTTTCAGGGAGAAGACGACGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGCTGCTGGTTCCTTaGCCTGGAGCAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVLLVP*PGAERL
Trigger: AAGCCTTTCTGCTCCAGGTCAAGGAACCAGCAGCAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTGCAAGTCATCTGTaGATGTGCCCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCASHL*MCPSCW
Trigger: CCAGCAGGAAGGGCACATTCACAGATGACTTGCACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTTCCTCTCCTGCCTaGGAGATTCATGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSASSPA*EIHGIS
Trigger: CGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGATTCTTGAGGGAGTaGGGGATTCAGGGCATGTAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGFLRE*GIQGMY
Trigger: GTACATGCCCTGAATCCCTCACTCCCTCAAGAATCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTAGTACCCCAAGCTaGGAAATGCATGGTACATGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCSTPS*EMHGTC
Trigger: ACATGTACCATGCATTTCTCAGCTTGGGGTACTACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGCTGTTTTCCAGCTaGTACTTGAGGCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKLFSS*YLRQDL
Trigger: CAAGTCTTGCCTCAAGTATCAGCTGGAAAACAGCTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTCGCAACTGGGATCTaGGGTTCGCCTTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVATGI*GSPWIV
Trigger: AACTATCCAAGGCGAACCTCAGATCCCAGTTGCGAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGACACATGAGGAGTTaGTATGGGAATCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRHMRS*YGNLRD
Trigger: GTCTCTCAGATTCCCATATCAACTCCTCATGTGTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGCCAGCTGCCATTGTaGTGGGAAGGGATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCQLPL*WEGMRN
Trigger: GTTTCTCATCCCTTCCCATCACAATGGCAGCTGGCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAACGTGAGCAGAGGCTaGGTAATGCCAGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNVSRG*VMPAAI
Trigger: AATGGCAGCTGGCATTACTCAGCCTCTGCTCACGTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTATTCCCATGGACTaGACTGCTGGTTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGIPMD*TAGCRS
Trigger: GCTCCTACAACCAGCAGTTCAGTCCATGGGAATACC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACACCGAAGATGGGGGTaGGGAGTGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKHRRWG*GVAERG
Trigger: TCCTCTCTCGGCCACTCCGCACCCCCATCTTCGGTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTGCTCTGCTTCTCTaGGGCGCCGCCAGACATGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAALLL*GAARHG
Trigger: ACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTGGGAACCGGGAGTGCTaGTCTGCTTCTCTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITGNREC*SASLRR
Trigger: GCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCC...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTTGTACTCCTCGGTCCTaGCGGTCACAGCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPCTPRS*RSQRRR
Trigger: CCGCCGACGCTGTGACCGGCAGGACCGAGGAGTACA...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTGCAGCGGCTGGAGGCTaGTGGGCTACCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPAAAGG*WATWEV
Trigger: CACTTCCCAGGTAGCCCAGCAGCCTCCAGCCGCTGC...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGGATTGTTCTACCTaGTGTTTGAGACTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLDCST*CLRLLS
Trigger: AGAGAGCAGTCTCAAACAGCAGGTAGAACAATCCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAAGGAGAAAGAGGTaGAGACAGTACTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGRRKR*RQYWRW
Trigger: CCACCGCCAGTACTGTCTGCACCTCTTTCTCCTTCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTTCCAGGAAGGAGGTaGTCTTACGCCGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLPGRR*SYAAGK
Trigger: TTTCCCAGCGGCGTAAGAGCACCTCCTTCCTGGAAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGATTCAAGTCCACTaGAACCTGCCGATTTCGGTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLIQVH*NLPISV
Trigger: TACCGAAATCGGCAGGTTGCAGTGGACTTGAATCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGACTCACTGGCTGTaGAGTAGTGGCCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLTHWL*SSGLTG
Trigger: TCCAGTGAGGCCACTACTGCACAGCCAGTGAGTCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYCNWL*RSNLRD
Trigger: GTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGGGTCTGTGCTACTaGAACTGGCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLGLCY*NWLCRS
Trigger: GCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTAGCTTGGGTCTGTaGTACTGCAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGSLGL*YCNWLC
Trigger: GCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTTCACCATAATTGTTaGTATCTCCTCGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVHHNC*YLLGVV
Trigger: GACAACCCCGAGGAGATAGCAACAATTATGGTGAAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTAAAGTTTGGAGGTaGTGTGTTGGGTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTKVWR*CVGSFC
Trigger: ACAGAAGGACCCAACACAGCACCTCCAAACTTTAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGTAGTGCTGCCTGCTaGCTGCTGAGATACTACAGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSSAAC*LLRYYS
Trigger: GCTGTAGTATCTCAGCAGGCAGCAGGCAGCACTACT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTGGGGTAGAAACTTaGCCAGGTGTGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTGVET*PGVTTG
Trigger: ACCAGTGGTCACACCTGGGCAAGTTTCTACCCCAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAAAAGGTGGCAGCTaGTCGCTGGGTAGAGTACCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGKGGS*SLGRVP
Trigger: AGGTACTCTACCCAGCGAGCAGCTGCCACCTTTTCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCTGCTTCTGTGATTaGTGTTGGAGCCGCCATGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSCFCD*CWSRHG
Trigger: TCCATGGCGGCTCCAACAGCAATCACAGAAGCAGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGGGCACCGTCTGCTaGAACAGAAACCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLGTVC*NRNLKS
Trigger: CGATTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCAACCTTGGTAGGCTaGCCAGTGTCTGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPTLVG*PVSDFA
Trigger: GGCAAAGTCAGACACTGGGCAGCCTACCAAGGTTGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCCAACAGTGTTTGTaGTGCTGGTTCCTTGACCTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPQQCL*CWFLDL
Trigger: CAGGTCAAGGAACCAGCAGCACAAACACTGTTGGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCACAGTTGCCCAGGTaGAGAGAACTTCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAQLPR*RELPCH
Trigger: ATGGCAAGGAAGTTCTCTGCACCTGGGCAACTGTGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGATGTTGAAATTCTaGAAGGAGGCAGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLMLKF*KEAVPT
Trigger: TGTGGGAACTGCCTCCTTGCAGAATTTCAACATCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCGATTTCCTTCCACATaGCCTTTATTGATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRFPST*PLLIWG
Trigger: ACCCCAGATCAATAAAGGGCATGTGGAAGGAAATCG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCCAAGCTGAGAAATaGATGGTACATGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPQAEK*MVHVQQ
Trigger: TTGTTGCACATGTACCATGCATTTCTCAGCTTGGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTCTCCAAAACTGCTTaGTGGGAGGATGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLSKTA*WEDVVG
Trigger: CCCCACTACATCCTCCCAGCAAGCAGTTTTGGAGAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTACTCTCCAAAACTaGTTGCTGGGAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSTLQN*LLGGCS
Trigger: ACTACATCCTCCCAGCAAGCAGTTTTGGAGAGTACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACATGGTCGGTTCGCTaGAGAGAGGCGAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTWSVR*REASGL
Trigger: GAGCCCGCTCGCCTCTCTCCAGCGAACCGACCATGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCGGCGCCGCCAGACATaGTCGGTTCGCTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPRRRQT*SVRWRE
Trigger: CTCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCG...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTACGGTCTCTTCCCGGTaGGGCTCCGGTGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPTVSSR*GSGGAL
Trigger: GAGTGCTCCACCGGAGCCCCACCGGGAAGAGACCGT...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGCCTGGGAAGTGGCGGTaGCGGTCACGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKPGKWR*RSRSLP
Trigger: GGGAAGAGACCGTGACCGCCACCGCCACTTCCCAGG...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCGGGCTACCTGGGAAGTaGCGGTGGCGGTCACGGTCT +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFGLPGK*RWRSRS
Trigger: AGACCGTGACCGCCACCGCCACTTCCCAGGTAGCCC...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATATCATCCTGCTGCTaGCTCCGTTCCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSISSCC*LRSSCG
Trigger: GCCACAGGAGGAACGGAGCCAGCAGCAGGATGATAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGCGACTTCCACGGTaGTTTCAGTGTCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRRLPR*FQCPDL
Trigger: AAGGTCTGGACACTGAAACCACCGTGGAAGTCGCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGCTCTTACGCCGCTaGGAAATGGCTACTTTCGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVLLRR*EMATFG
Trigger: ACCGAAAGTAGCCATTTCCCAGCGGCGTAAGAGCAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGATGTTGTATGGGTTaGGAAGATGAAACCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGCCMG*EDETPV
Trigger: AACAGGGGTTTCATCTTCCCAACCCATACAACATCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGAGGCTGACTCACTaGCTGTGCAGTAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLRLTH*LCSSGL
Trigger: GAGGCCACTACTGCACAGCCAGTGAGTCAGCCTCAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGTGCTACTGCAACTaGCTCTGCAGGAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLCYCN*LCRSNL
Trigger: CAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCGGCTGGGTAGCTTaGGTCTGTGCTACTGCAACT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVGWVA*VCATAT
Trigger: AGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTATTTGCTGTGGCATaGAAGACGCAGGAATTGGTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLFAVA*KTQELV
Trigger: AACCAATTCCTGCGTCTTCCATGCCACAGCAAATAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGTCCTTCTGTCATTTaGGCACGTCTAAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGPSVI*ARLSSE
Trigger: TTCTGAACTTAGACGTGCCCAAATGACAGAAGGACC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTATGACTAAAGTTTaGAGGTGCTGTGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCMTKV*RCCVGS
Trigger: GGACCCAACACAGCACCTCCAAACTTTAGTCATACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTGCTGCTGTGGTTaGGACTCCAGCAATGCTACT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGCCCG*DSSNAT
Trigger: AGTAGCATTGCTGGAGTCCCAACCACAGCAGCAGCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTACCACACCTGTGCTaGTGGCAACTCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLPHLC*WQLQQS
Trigger: GGATTGCTGGAGTTGCCACCAGCACAGGTGTGGTAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTCAGATGTGGATGTaGGGACTTGAAGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSQMWM*GLEVTG
Trigger: CCCCGTCACTTCAAGTCCCCACATCCACATCTGAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGCTGTACCAAGGGTaGGATACTAGGTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRLYQG*DTRYLG
Trigger: CCCCAAGTACCTAGTATCCCACCCTTGGTACAGCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAGTTCAGTACCCACTaGCAGCACCGGAGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKFSTH*QHRSLS
Trigger: ACTAAGGCTCCGGTGCTGCCAGTGGGTACTGAACTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAGGTTGCTGGGACTaGGTTAGAGAAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRGCWD*VREGPG
Trigger: TCCAGGACCTTCTCTAACCCAGTCCCAGCAACCTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGATGGGGCGAGTGTaGACTACCGGAACCATCATC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLMGRV*TTGTII
Trigger: GATGATGGTTCCGGTAGTCCACACTCGCCCCATCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGTGTTTGTGCTGCTaGTTCCTTGACCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQCLCC*FLDLEQ
Trigger: CTGCTCCAGGTCAAGGAACCAGCAGCACAAACACTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCCAAATGGGGTAGCTaGAAAGCCATACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAKWGS*KAILLW
Trigger: CCACAGCAGTATGGCTTTCCAGCTACCCCATTTGGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAGTGGCTGTGGTGCTaGGCCACCCGTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKWLWC*ATRPTP
Trigger: TGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGTTCCCACAGGTTaGAACTGGCCAAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAVPTG*NWPSGC
Trigger: ACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTCTAGGTCTAAGTaGTCCGCAGGTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVSRSK*SAGWSL
Trigger: CAGGCTCCAACCTGCGGACCACTTAGACCTAGAGAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTTGTGTCGCAACTaGGATCTGAGGTTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGLCRN*DLRFAL
Trigger: CAAGGCGAACCTCAGATCCCAGTTGCGACACAACCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGCGGCTGTCCCACTaGAAGGAAATGAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSERLSH*KEMSTR
Trigger: TCTGGTGCTCATTTCCTTCCAGTGGGACAGCCGCTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCATGAGGAGTTGATATaGGAATCTGAGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHEELI*ESERQG
Trigger: ACCCTGTCTCTCAGATTCCCATATCAACTCCTCATG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGTCCAAGGTTAGCTaGTATTCCCATGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSKVS*YSHGLN
Trigger: GTTCAGTCCATGGGAATACCAGCTAACCTTGGACAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCGAGGTGGGAAGCCCTaGTACAGAACATCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRGGKP*YRTSPE
Trigger: CTCTGGAGATGTTCTGTACCAGGGCTTCCCACCTCG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCAAAACTGCTTGCTaGGAGGATGTAGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSKTAC*EDVVGA
Trigger: AGCCCCCACTACATCCTCCCAGCAAGCAGTTTTGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACATCTCAGGGGCCATaGACTCTGGGGTACCTATCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTSQGP*TLGYLS
Trigger: TGATAGGTACCCCAGAGTTCATGGCCCCTGAGATGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTTCTACCTGCTGTTTaGGACTGCTCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVLPAV*DCSLPA
Trigger: AGCAGGAAGAGAGCAGTCTCAAACAGCAGGTAGAAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCACTCGAGATTCTGTaGAGACAGAGGATCCCTGAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSLEIL*RQRIPD
Trigger: GTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGGAAAAATATCTGTaGTTCTGGGTATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWEKYL*FWVCWG
Trigger: ACCCCAACATACCCAGAATCACAGATATTTTTCCCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTAGGGGGAGGTGACTaGAAATCACTGGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVGGGD*KSLGSE
Trigger: TTCAGACCCCAGTGATTTTCAGTCACCTCCCCCTAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTACTTGAGGATGGCTaGCCCTGGCTCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLLEDG*PWLCPC
Trigger: ACAGGGGCAGAGCCAGGGTCAGCCATCCTCAAGTAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATAATTTCTCGCACTTaGTCCACAAACGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDIISRT*STNDSL
Trigger: GAGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTCATTCCAGGGCTCTaGGCTGTAGAGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFIPGL*AVEAAT
Trigger: AGTTGCTGCCTCTACAGCTCAGAGCCCTGGAATGAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGGATGATGCAGAGTaGGACAAGTTCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRDDAE*DKFIPG
Trigger: CCCTGGAATGAACTTGTCTCACTCTGCATCATCCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAATGTTGGTCCTGTATaGCTAAAGTTTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNVGPV*LKFGGA
Trigger: AGCACCTCCAAACTTTAGTCATACAGGACCAACATT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGCCTGCTGCCTGCTaGGATACTACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLPAAC*DTTAGG
Trigger: GCCTCCAGCTGTAGTATCTCAGCAGGCAGCAGGCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCAGTTGTACTGCTATaGGATGTCTTATCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPVVLL*DVLSSE
Trigger: CTCACTAGATAAGACATCTCATAGCAGTACAACTGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTAGAAGCTATCACTaGTGGAATGACCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSRSYH*WNDQRM
Trigger: CATCCTTTGGTCATTCCATCAGTGATAGCTTCTACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTACTTCAGGACAATaGGTATGGGGCTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSTSGQ*VWGWLG
Trigger: TCCCAACCAGCCCCATACTCATTGTCCTGAAGTAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCAGGTTTCACTCCTaGTGTAGTAGTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSRFHS*CSSADW
Trigger: CCAGTCAGCACTACTACATCAGGAGTGAAACCTGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCTGCAACAGAAACCTaGAATCGTCCCATCTTAAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAATET*NRPILK
Trigger: TTTTAAGATGGGACGATTTCAGGTTTCTGTTGCAGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTCTCTGGCACATCTaGAGAGATACCAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTLWHI*RDTRDG
Trigger: ACCATCCCTGGTATCTCTTCAGATGTGCCAGAGAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTGAAGCTGCACTCTaGCCAGACAGGTTACCTGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTEAAL*PDRLPE
Trigger: TTCAGGTAACCTGTCTGGTCAGAGTGCAGCTTCAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGGGCTGTAACAGCTaGTTCTGCCCGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRGCNS*FCPDSG
Trigger: CCCAGAGTCCGGGCAGAATCAGCTGTTACAGCCCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGCACCATCACTGGTaGAGGCTGAATAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWHHHW*RLNRGC
Trigger: ACAACCTCTATTCAGCCTTCACCAGTGATGGTGCCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTGCAAGTCATCTGTaGATGTGCCCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCASHL*MCPSCW
Trigger: CCAGCAGGAAGGGCACATTCACAGATGACTTGCACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCGTCCCACTCCATTaGGCGCCAAATGGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPVPLH*APNGVA
Trigger: AGCTACCCCATTTGGCGCTCAATGGAGTGGGACGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGGAAAGCATGGTCTaGAGCTGCCCCTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQESMV*SCPLTK
Trigger: TTTTGTCAAGGGGCAGCTTCAGACCATGCTTTCCTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTGTTTTTAACCACTaGTGCCAACCTAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSVFNH*CQPNFP
Trigger: TGGGAAGTTAGGTTGGCATCAGTGGTTAAAAACAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTGATGGGAAGGGATaGGAAACCTGTCTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCDGKG*ETCLSR
Trigger: ACGGCTCAGACAGGTTTCTCATCCCTTCCCATCACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGCCAGCTGCCATTGTaGTGGGAAGGGATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCQLPL*WEGMRN
Trigger: GTTTCTCATCCCTTCCCATCACAATGGCAGCTGGCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTATTCCCATGGACTaGACTGCTGGTTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGIPMD*TAGCRS
Trigger: GCTCCTACAACCAGCAGTTCAGTCCATGGGAATACC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGATGCGCCATGGACTaGGGCACACTTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGCAMD*GTLEGG
Trigger: TCCACCCTCAAGTGTGCCTCAGTCCATGGCGCATCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTATTCCCTGCTGCTaGGGATGTTGTATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCIPCC*GCCMGW
Trigger: CCAACCCATACAACATCCTCAGCAGCAGGGAATACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535572.5
CDS-3UTR GCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTGCTGCTCTGCTTCTCTaGGGCGCCGCCAGACATGGT +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITAALLL*GAARHG
Trigger: ACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGC...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACAGGGAACCGGGAGTaGTGCTCTGCTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTGNRE*CSASLR
Trigger: CCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGTCTTTGCTGGTACTaGTGGGGACAGTCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGLCWY*WGQSRG
Trigger: CCCCCTCGACTGTCCCCAGCAGTACCAGCAAAGACC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTTCGATATCATCCTaGTGCTGGCTCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSSISS*CWLRSS
Trigger: GGAGGAACGGAGCCAGCAGCAGGATGATATCGAAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTAGCAGAAGGGAGCTaGTTGATTCCTGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLAEGS*LIPVWE
Trigger: TTCCCAGACAGGAATCAAGCAGCTCCCTTCTGCTAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGTTGATGTTGATCTaGCTCAGGTTCTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLLMLI*LRFFRF
Trigger: GAACCTGAAGAACCTGAGGCAGATCAACATCAACAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATGAGTTGTATGGAATaGCCTCATACTGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDMSCME*PHTVLP
Trigger: TGGCAGAACAGTATGAGGGCATTCCATACAACTCAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATCTGTACTGATAGGTaGAGAAATACTAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDICTDR*RNTREG
Trigger: CCCCTCTCTAGTATTTCTGCACCTATCAGTACAGAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSYCNWL*RSNLRD
Trigger: GTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGGGACTCCAGCAATaGTACTTAAGAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLGLQQ*YLRKEV
Trigger: TACCTCCTTTCTTAAGTAGCATTGCTGGAGTCCCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGTGCTGTGGCTGCTaGTGTGGTTGGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWCCGC*CGWDSS
Trigger: GCTGGAGTCCCAACCACAGCAGCAGCCACAGCACCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGACTGGTGCTGTGGCTaGTGCTGTGGTTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDWCCG*CCGWDS
Trigger: GGAGTCCCAACCACAGCAGCAGCCACAGCACCAGTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGTAGTGCTGCCTGCTaGCTGCTGAGATACTACAGC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSSAAC*LLRYYS
Trigger: GCTGTAGTATCTCAGCAGGCAGCAGGCAGCACTACT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCACAGTAGTGCTGCCTaGTGCCTGCTGAGATACTAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSHSSAA*CLLRYY
Trigger: GTAGTATCTCAGCAGGCAGCAGGCAGCACTACTGTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTGGGGTAGAAACTTaGCCAGGTGTGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTGVET*PGVTTG
Trigger: ACCAGTGGTCACACCTGGGCAAGTTTCTACCCCAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCTGCTTCTGTGATTaGTGTTGGAGCCGCCATGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSCFCD*CWSRHG
Trigger: TCCATGGCGGCTCCAACAGCAATCACAGAAGCAGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGGCACCGTCTGCTaGAACAGAAACCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLGTVC*NRNLKS
Trigger: CGATTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACGACCCACTTTGTTTaGTGTAGTTGTCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTTHFV*CSCHLK
Trigger: TTTCAGGTGACAACTACAGCAAACAAAGTGGGTCGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCATAAAAGGAGGAGATaGCACTGGTCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHKRRR*HWSFFL
Trigger: AAGAAAGAAGGACCAGTGGCATCTCCTCCTTTTATG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGCAGGGGGCACCTTaGCCAGTTTGGTATACAAAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQQGAP*PVWYTK
Trigger: CTTTGTATACCAAACTGGGCAAGGTGCCCCCTGCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAACAGTGTTTGTGCTaGTGGTTCCTTGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQQCLC*WFLDLE
Trigger: CTCCAGGTCAAGGAACCAGCAGCACAAACACTGTTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCCAACAGTGTTTGTaGTGCTGGTTCCTTGACCTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPQQCL*CWFLDL
Trigger: CAGGTCAAGGAACCAGCAGCACAAACACTGTTGGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCACAGTTGCCCAGGTaGAGAGAACTTCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAQLPR*RELPCH
Trigger: ATGGCAAGGAAGTTCTCTGCACCTGGGCAACTGTGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTCACCTGTTCAGATaGACAGTTAAACTTCGCACA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCHLFR*TVKLRT
Trigger: TGTGCGAAGTTTAACTGTGCATCTGAACAGGTGACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCCAACAGTGTTTGTaGTGCTGGTTCTACAGAGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPQQCL*CWFYRA
Trigger: AGCTCTGTAGAACCAGCAGCACAAACACTGTTGGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTCTGTCACCGAAGATaGGGGTGCGGAGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFCHRR*GCGVAE
Trigger: CTCGGCCACTCCGCACCCCCATCTTCGGTGACAGAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS-3UTR CCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCACATGGTCGGTTCGCTaGAGAGAGGCGAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFTWSVR*REASGL
Trigger: GAGCCCGCTCGCCTCTCTCCAGCGAACCGACCATGT...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCTTGTCCATAGTGTaGCGGCGGCGCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSLSIV*RRRLYS
Trigger: GGAGTACAGGCGCCGCCGCCACACTATGGACAAGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTTTGCTGGTACTGCTaGGGACAGTCGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLCWYC*GQSRGQ
Trigger: CTGCCCCCTCGACTGTCCCCAGCAGTACCAGCAAAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCACAAGGCTAGGCTaGGACACTGGGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPTRLG*DTGRSL
Trigger: CAAAGACCGCCCAGTGTCCCAGCCTAGCCTTGTGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACATTCCCACGGCCTTaGTCTCCAGCTCTTCGATAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTFPRP*SPALRY
Trigger: ATATCGAAGAGCTGGAGACCAAGGCCGTGGGAATGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGGGCCATGAACTCTaGGGTACCTATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRGHEL*GTYHTL
Trigger: AAGAGTGTGATAGGTACCCCAGAGTTCATGGCCCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTTGTCAAAACTGGCTaGCTTCACCCCACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFVKTG*LHPTGH
Trigger: GTGACCAGTGGGGTGAAGCCAGCCAGTTTTGACAAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTCCTGTTTCCTCTTaGAAGAAGGCATGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTPVSS*KKAWFK
Trigger: TTTGAACCATGCCTTCTTCCAAGAGGAAACAGGAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTGCCTGTTCATGTTaGGAACCATATGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCACSC*EPYETV
Trigger: GACAGTTTCATATGGTTCCCAACATGAACAGGCACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGGTGGAAGAGCACTaGGAGAGATGCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGVEEH*ERCGTQ
Trigger: CTGTGTCCCGCATCTCTCCCAGTGCTCTTCCACCCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTTTCGGTGGGCAGGTaGGAGGTGGTGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLSVGR*EVVKKK
Trigger: TTTCTTTTTCACCACCTCCCACCTGCCCACCGAAAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGGAAGAAGACTTTaGCCAACAGTCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGGRRL*PTVLSR
Trigger: CCTGCTGAGGACTGTTGGCCAAAGTCTTCTTCCACC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGTTCAAACATAGGATaGACCTGTATCTCACATGAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGSNIG*TCISHD
Trigger: GTCATGTGAGATACAGGTCCATCCTATGTTTGAACC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGCCCCCTTGTACTaGCTTCTGTTCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRAPLY*LLFRYL
Trigger: CAGATACCTGAACAGAAGCCAGTACAAGGGGGCCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGAGGCAAGACTTGTaGAGCTTGAGGCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLRQDL*SLRLTH
Trigger: GTGAGTCAGCCTCAAGCTCCACAAGTCTTGCCTCAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCTTCCACTGGAAGATaGGACGTTCTCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPSTGR*DVLIAI
Trigger: GATGGCAATGAGAACGTCCCATCTTCCAGTGGAAGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCCTGATCACCCTCTaGTTCCACACTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSLITL*FHTDIL
Trigger: GAGGATGTCAGTGTGGAACCAGAGGGTGATCAGGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTACCACACCTGTGCTaGTGGCAACTCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLPHLC*WQLQQS
Trigger: GGATTGCTGGAGTTGCCACCAGCACAGGTGTGGTAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGACACAGGTGGTATaGGGAGACCACCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQTQVV*GDHLKL
Trigger: TAACTTCAGGTGGTCTCCCCATACCACCTGTGTCTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTCAGATGTGGATGTaGGGACTTGAAGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSQMWM*GLEVTG
Trigger: CCCCGTCACTTCAAGTCCCCACATCCACATCTGAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGAGGCTTAGGACCTaGGGTAGCAGTACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWRLRT*GSSTAP
Trigger: GGGGGCAGTACTGCTACCCCAGGTCCTAAGCCTCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGCTGTACCAAGGGTaGGATACTAGGTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRLYQG*DTRYLG
Trigger: CCCCAAGTACCTAGTATCCCACCCTTGGTACAGCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTACAGCAGGCACATTaGCAACAGGCTGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVQQAH*QQAVPR
Trigger: CCTTGGTACAGCCTGTTGCCAATGTGCCTGCTGTAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCAGGTGTGACCACTaGTGTAACTGGCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPRCDH*CNWQSN
Trigger: GTTGCTTTGCCAGTTACACCAGTGGTCACACCTGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTAGTAGTGCTGACTaGGGTAGAAACTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCSSAD*GRNLPR
Trigger: CCTGGGCAAGTTTCTACCCCAGTCAGCACTACTACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAGTTCAGTACCCACTaGCAGCACCGGAGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSKFSTH*QHRSLS
Trigger: ACTAAGGCTCCGGTGCTGCCAGTGGGTACTGAACTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGAGGTTGCTGGGACTaGGTTAGAGAAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRGCWD*VREGPG
Trigger: TCCAGGACCTTCTCTAACCCAGTCCCAGCAACCTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCTCTAGAGGTTGCTaGGACTGGGTTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSSRGC*DWVREG
Trigger: ACCTTCTCTAACCCAGTCCCAGCAACCTCTAGAGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGTTGGAGCCGCCATaGACACAGGACCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLLEPP*TQDQPQ
Trigger: CTGCGGTTGGTCCTGTGTCCATGGCGGCTCCAACAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTCTGTGATTGCTGTTaGAGCCGCCATGGACACAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFCDCC*SRHGHR
Trigger: CCTGTGTCCATGGCGGCTCCAACAGCAATCACAGAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGACTCTGAGGTGCTaGATTCAAAATGAACAGACT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRTLRC*IQNEQT
Trigger: AGTCTGTTCATTTTGAATCCAGCACCTCAGAGTCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGCTTCTCTTTCTTTaGTATCACAGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRLLFL*YHSRKN
Trigger: GTTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGTGGAGGGTCTGCTaGGGGTGCAAGACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGWRVC*GCKTEA
Trigger: AGCTTCAGTCTTGCACCCCCAGCAGACCCTCCACCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGTGTTTGTGCTGCTaGTTCCTTGACCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQCLCC*FLDLEQ
Trigger: CTGCTCCAGGTCAAGGAACCAGCAGCACAAACACTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGCCTGAGAGATTCATaGCATCTCGGGCCCAATTGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCLRDS*HLGPNC
Trigger: ACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAAGCCATACTGCTGTaGGGGGCACATAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKAILL*GAHRLG
Trigger: ACCAAGTCTATGTGCCCCCCACAGCAGTATGGCTTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCAAATGGGGTAGCTaGAAAGCCATACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAKWGS*KAILLW
Trigger: CCACAGCAGTATGGCTTTCCAGCTACCCCATTTGGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCATTGAGCGCCAAATaGGGTAGCTGGAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPLSAK*GSWKAI
Trigger: TATGGCTTTCCAGCTACCCCATTTGGCGCTCAATGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGGAACTGGCCAAGTaGCTGTGGTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLELAK*LWCWAT
Trigger: GGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTATATGACAGTCACTaGCCAGGCATCACGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLYDSH*PGITFV
Trigger: AACAAACGTGATGCCTGGCCAGTGACTGTCATATAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGCTGAGAAATGCATaGTACATGTGCAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKLRNA*YMCNKR
Trigger: CCTCTTGTTGCACATGTACCATGCATTTCTCAGCTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGCACCAGAGTGGACTaGAACAACCGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSTRVD*NNRGLC
Trigger: ACACAACCCTCGGTTGTTCCAGTCCACTCTGGTGCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGCTGCAGAAGGGTTaGAAGCTGACTAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRLQKG*KLTRNH
Trigger: GTGGTTCCTAGTCAGCTTCCAACCCTTCTGCAGCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGTGTTTGTGCTGCTaGTTCTACAGAGCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQCLCC*FYRAGC
Trigger: GCAACCAGCTCTGTAGAACCAGCAGCACAAACACTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGACCTTTAAGGATCTaGCGGCACCAGCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRPLRI*RHQLLR
Trigger: TCTAAGAAGCTGGTGCCGTCAGATCCTTAAAGGTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTCTACCTGCTGTTTaGGACTGCTCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVLPAV*DCSLPA
Trigger: AGCAGGAAGAGAGCAGTCTCAAACAGCAGGTAGAAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCACTCGAGATTCTGTaGAGACAGAGGATCCCTGAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSLEIL*RQRIPD
Trigger: GTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTAATCTTAGATTCTaGAGGTGTCCTACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSNLRF*RCPTRK
Trigger: TTTCCTGGTAGGACACCTTCAGAATCTAAGATTAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGCTCTCATTGTTATaGGTTAACACAGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLLSLL*VNTAGA
Trigger: TGCGCCTGCTGTGTTAACTCATAACAATGAGAGCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAGGCAGTTCTTCTTaGTTCAAGTCCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGGSSS*FKSTAT
Trigger: GGTTGCAGTGGACTTGAATCAAGAAGAACTGCCTCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTTGTAACACTGTCTaGGGCAGATGGATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSCNTV*GRWIKG
Trigger: GCCCTTTATCCATCTGCCTCAGACAGTGTTACAAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTTCCAGCTGATACTTaGGGCAAGACTTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFPADT*GKTCGA
Trigger: AGCTCCACAAGTCTTGCCTCAAGTATCAGCTGGAAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGGAATTGGTTGTTTaGACTCTCCTTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQELVV*TLLPIS
Trigger: AGAAATTGGAAGGAGAGTTCAAACAACCAATTCCTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGATGATGCAGAGTaGGACAAGTTCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRDDAE*DKFIPG
Trigger: CCCTGGAATGAACTTGTCTCACTCTGCATCATCCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTCAGACTGAATTACTaGTGTGGAAATGTCATTAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLRLNY*CGNVIR
Trigger: CCTAATGACATTTCCACATCAGTAATTCAGTCTGAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTGGAAAGTACTGGTaGTTCAGACACAGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAGKYW*FRHRWY
Trigger: ATACCACCTGTGTCTGAATCACCAGTACTTTCCAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGTATTGTGATACTTaGAACTACGCTGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRYCDT*NYAGKY
Trigger: GTACTTTCCAGCGTAGTTTCAAGTATCACAATACCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGATGTAGTAGATATTaGGACAACTGCAGGTATTGT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGCSRY*DNCRYC
Trigger: ACAATACCTGCAGTTGTCTCAATATCTACTACATCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTGGGGACTTGAAGTaGCGGGGATGTAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCGDLK*RGCSRY
Trigger: ATATCTACTACATCCCCGTCACTTCAAGTCCCCACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATGAGCTGTGTTCACTaGACAGAGACCGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLMSCVH*TETAAF
Trigger: AAAAGCTGCGGTCTCTGTTCAGTGAACACAGCTCAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCAGGTTTCACTCCTaGTGTAGTAGTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSRFHS*CSSADW
Trigger: CCAGTCAGCACTACTACATCAGGAGTGAAACCTGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTGTTCTTCTCAATTaGGCATCAAGATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSVLLN*ASRSSR
Trigger: TCTAGAGGATCTTGATGCTCAATTGAGAAGAACACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGCTGGATTCAAAATaGACAGACTTTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVLDSK*TDFASS
Trigger: AGAAGATGCAAAGTCTGTTCATTTTGAATCCAGCAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTCTCTGGCACATCTaGAGAGATACCAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTLWHI*RDTRDG
Trigger: ACCATCCCTGGTATCTCTTCAGATGTGCCAGAGAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTTCTTTGTGTCAGTaGTCTTGTCCTCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSLCQ*SCPQFL
Trigger: CAAAAACTGAGGACAAGATCACTGACACAAAGAAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTAGGAAGGCTCTTTaGGCTCAGCTGATGGGGCGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKARKAL*AQLMGR
Trigger: TCGCCCCATCAGCTGAGCTCAAAGAGCCTTCCTAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGAATTACTAAGGCTTTaGCTTAGATTCTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDELLRL*LRFWLG
Trigger: TCCTAGCCAGAATCTAAGTCAAAGCCTTAGTAATTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTCATCTTCGATATCTaGCTCATTGTCGCTACTCAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFIFDI*LIVATH
Trigger: ATGAGTAGCGACAATGAGTCAGATATCGAAGATGAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACCAGACAGGTTACCTaGAAGCTGGGGGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTRQVT*KLGAFI
Trigger: AATAAAAGCCCCCAGCTTTCAGGTAACCTGTCTGGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTGAAGCTGCACTCTaGCCAGACAGGTTACCTGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTEAAL*PDRLPE
Trigger: TTCAGGTAACCTGTCTGGTCAGAGTGCAGCTTCAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGGGGGTGCAAGACTaGAGCTGCACTCTGACCAGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLGVQD*SCTLTR
Trigger: TCTGGTCAGAGTGCAGCTTCAGTCTTGCACCCCCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATCACTGGTGAAGGCTaGATAGAGGTTGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLITGEG*IEVVTG
Trigger: TCCAGTGACAACCTCTATTCAGCCTTCACCAGTGAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGCACCATCACTGGTaGAGGCTGAATAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWHHHW*RLNRGC
Trigger: ACAACCTCTATTCAGCCTTCACCAGTGATGGTGCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAAAGGCTTGGTACTaGAATGGCACCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRKAWY*NGTITG
Trigger: ACCAGTGATGGTGCCATTTCAGTACCAAGCCTTTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGTGGTGGTGGTGGTaGTTCCCAGAATATGCCATT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWWWWW*FPEYAI
Trigger: AATGGCATATTCTGGGAATCACCACCACCACCACCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTAGGAACCACAGTTaGTACCCCCGGGATCGCAGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTRNHS*YPRDRS
Trigger: GCTGCGATCCCGGGGGTATCAACTGTGGTTCCTAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAAGGGTTGGAAGCTaGCTAGGAACCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRRVGS*LGTTVD
Trigger: ATCAACTGTGGTTCCTAGTCAGCTTCCAACCCTTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCTGGCTGGGACACTTaGACCTGTCCTCCTACACCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPGWDT*TCPPTP
Trigger: TGGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCTGTTTTCCAGCTaGTACTTGAGGCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSALFSS*YLRQDL
Trigger: CAAGTCTTGCCTCAAGTATCAGCTGGAAAACAGGGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGACAGGGCCTTCTTTaGCTTGAGAAACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGQGLL*LEKPSE
Trigger: CTCAGAAGGTTTCTCAAGTCAAAGAAGGCCCTGTCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535572.5
CDS-3UTR GCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTACAGGGAACCGGGAGTaGTGCTCTGCTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITTGNRE*CSASLR
Trigger: CCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGT...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCCGGCGGAAGAAGCGGTaGTCAGTGGTGGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFRRKKR*SVVVVV
Trigger: GACCACTACCACCACTGAGCACCGCTTCTTCCGCCG...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTGGTCTTTGCTGGTACTaGTGGGGACAGTCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPGLCWY*WGQSRG
Trigger: CCCCCTCGACTGTCCCCAGCAGTACCAGCAAAGACC...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGCCCGCTTCAGGGTTaGCAGACCGAGGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSPLQG*QTEVSN
Trigger: ATTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCTCCCGTACCAACTaGCGCTGCTCTCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSSRTN*RCSRFL
Trigger: GAGGAAACGAGAGCAGCGGCAGTTGGTACGGGAGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTAGCAGAAGGGAGCTaGTTGATTCCTGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLAEGS*LIPVWE
Trigger: TTCCCAGACAGGAATCAAGCAGCTCCCTTCTGCTAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACAGTAGAAGGTATATaGCCTGGGACTGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTVEGI*PGTVPV
Trigger: TACAGGCACAGTCCCAGGGCATATACCTTCTACTGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTAGTTCTTCCTTCATaGCTTCCACTGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVVLPS*LPLEDG
Trigger: CCCATCTTCCAGTGGAAGGCATGAAGGAAGAACTAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTAGGAATGCCTATTTaGTGTGGCATGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVGMPI*CGMEDA
Trigger: TGCGTCTTCCATGCCACAGCAAATAGGCATTCCTAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTTGCAGGGACTGGTaGTGTGGCTGCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCCRDW*CGCCCG
Trigger: ACCACAGCAGCAGCCACAGCACCAGTCCCTGCAACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAGTTACCACACCTGTaGTGGTGGCAACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSKLPHL*WWQLQQ
Trigger: TTGCTGGAGTTGCCACCAGCACAGGTGTGGTAACTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACAGCTGTGAAGCTGTaGTTGGGAATGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTAVKL*LGMKWW
Trigger: CCACCACTTCATTCCCAAGCACAGCTTCACAGCTGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATAACTAGACACTCCTaGTCCAGGAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLITRHS*SRRGRG
Trigger: TCCTCTTCCTCTCCTGGAGCAGGAGTGTCTAGTTAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAAGTAGGTCCTGCTaGTTGGGGAAGAATAGGAGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRSRSC*LGKNRS
Trigger: ACTCCTATTCTTCCCCAAGCAGCAGGACCTACTTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTAGAAGTAGGTCCTaGTGCTTGGGGAAGAATAGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCRSRS*CLGKNR
Trigger: CCTATTCTTCCCCAAGCAGCAGGACCTACTTCTACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGGAGTTTGCTTGGTaGAACAGCAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQEFAW*NSSSWD
Trigger: ATCCCAACTACTGCTGTTGCACCAAGCAAACTCCTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGATCCTCTAGAGGTTaGTGGGACTGGGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRSSRG*WDWVRE
Trigger: TTCTCTAACCCAGTCCCAGCAACCTCTAGAGGATCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTTCTGGGCACCGTCTaGTGCAACAGAAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFLGTV*CNRNLK
Trigger: TTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAGAAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTACCAGGGATGGTTATaGCATTCGGCTCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYQGWL*HSALVS
Trigger: TGAAACCAGAGCCGAATGGCATAACCATCCCTGGTA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAACAGTGTTTGTGCTaGTGGTTCCTTGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQQCLC*WFLDLE
Trigger: CTCCAGGTCAAGGAACCAGCAGCACAAACACTGTTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATTCATGTGCCCTTTaGTTCCTCTCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNSCAL*FLSCLR
Trigger: TCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAACAGTGTTTGTGCTaGTGGTTCTACAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQQCLC*WFYRAG
Trigger: ACCAGCTCTGTAGAACCAGCAGCACAAACACTGTTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR CCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCTCCTTGTCCATAGTGTaGCGGCGGCGCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFSLSIV*RRRLYS
Trigger: GGAGTACAGGCGCCGCCGCCACACTATGGACAAGGA...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCTTTGCTGGTACTGCTaGGGACAGTCGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPLCWYC*GQSRGQ
Trigger: CTGCCCCCTCGACTGTCCCCAGCAGTACCAGCAAAG...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTAGGCTGGGACACTaGGCGGTCTTTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKARLGH*AVFAGT
Trigger: AGTACCAGCAAAGACCGCCCAGTGTCCCAGCCTAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTCCCACAAGGCTAGGCTaGGACACTGGGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITPTRLG*DTGRSL
Trigger: CAAAGACCGCCCAGTGTCCCAGCCTAGCCTTGTGGG...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGGCCATGAACTCTaGGGTACCTATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRGHEL*GTYHTL
Trigger: AAGAGTGTGATAGGTACCCCAGAGTTCATGGCCCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGGCTTCACCCCACTaGTCACGCGACGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLASPH*SRDGRS
Trigger: AGATCTACCGTCGCGTGACCAGTGGGGTGAAGCCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTGTCAAAACTGGCTaGCTTCACCCCACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFVKTG*LHPTGH
Trigger: GTGACCAGTGGGGTGAAGCCAGCCAGTTTTGACAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTACTTTGTCAAAACTaGCTGGCTTCACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLCQN*LASPHW
Trigger: CCAGTGGGGTGAAGCCAGCCAGTTTTGACAAAGTAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCAACAGCAGAAAGATaGGAACACAAACCGACATGC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLATAER*EHKPTC
Trigger: GCATGTCGGTTTGTGTTCCCATCTTTCTGCTGTTGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGACAGTACTGGCGGTaGGGTGGAAGAGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRQYWR*GGRALG
Trigger: TCCCAGTGCTCTTCCACCCCACCGCCAGTACTGTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATACGCCGCTGGGAAATaGCTACTTTCGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYAAGK*LLSVGR
Trigger: CCTGCCCACCGAAAGTAGCCATTTCCCAGCGGCGTA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCATAACTACGGCCTCTaGTGTCCAGTTAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSHNYGL*CPVSWA
Trigger: AGCCCAACTAACTGGACACCAGAGGCCGTAGTTATG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGAAACGGTCAATTCTaGGGCATGGTAATTATGCTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRNGQF*GMVIML
Trigger: AAGCATAATTACCATGCCCCAGAATTGACCGTTTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGACCTGCTGAGATGTaGTTCCTTGGGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRPAEM*FLGGNR
Trigger: TCTGTTTCCCCCAAGGAACCACATCTCAGCAGGTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTGAGGATGTTGTATaGGTTGGGAAGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAEDVV*VGKMKP
Trigger: GGGTTTCATCTTCCCAACCCATACAACATCCTCAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCCAAAGTGGTCGGCTaGGTAGCTTGGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAKVVG*VAWVCA
Trigger: AGCACAGACCCAAGCTACCCAGCCGACCACTTTGGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTTCATGCCTTCCACTaGAAGATGGGACGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLHAFH*KMGRSH
Trigger: ATGAGAACGTCCCATCTTCCAGTGGAAGGCATGAAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGGAGGTGCTGTGTTaGGTCCTTCTGTCATTTGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLEVLC*VLLSFG
Trigger: CCCAAATGACAGAAGGACCCAACACAGCACCTCCAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTTGTTGCAGGGACTaGTGCTGTGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKACCRD*CCGCCC
Trigger: ACAGCAGCAGCCACAGCACCAGTCCCTGCAACAAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCACACCTGTGCTGGTaGCAACTCCAGCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPHLCW*QLQQSP
Trigger: AGGGGATTGCTGGAGTTGCCACCAGCACAGGTGTGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGACACAGGTGGTATaGGGAGACCACCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQTQVV*GDHLKL
Trigger: TAACTTCAGGTGGTCTCCCCATACCACCTGTGTCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTACTTGAAACTACGCTaGAAAGTACTGGTGATTCAG +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDYLKLR*KVLVIQ
Trigger: CTGAATCACCAGTACTTTCCAGCGTAGTTTCAAGTA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAACGATCTCAGATGTaGATGTGGGGACTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQRSQM*MWGLEV
Trigger: CACTTCAAGTCCCCACATCCACATCTGAGATCGTTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTAGGTCCTGCTGCTTaGGGAAGAATAGGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVGPAA*GRIGVE
Trigger: TTCTACTCCTATTCTTCCCCAAGCAGCAGGACCTAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGGATACTAGGTACTTaGGGTAATAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGILGT*GNKGVE
Trigger: TTCTACACCTTTATTACCCCAAGTACCTAGTATCCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGTAGTTGGGATGCCTaGTGTGACAGTGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSSWDA*CDSALY
Trigger: ATAGAGAGCACTGTCACACCAGGCATCCCAACTACT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGCAACAGCAGTAGTTaGGATGCCTGGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCNSSS*DAWCDS
Trigger: ACTGTCACACCAGGCATCCCAACTACTGCTGTTGCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGTCAGGAGTTTGCTTaGTGCAACAGCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSQEFA*CNSSSW
Trigger: CCAACTACTGCTGTTGCACCAAGCAAACTCCTGACT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTAGTAGTGCTGACTaGGGTAGAAACTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCSSAD*GRNLPR
Trigger: CCTGGGCAAGTTTCTACCCCAGTCAGCACTACTACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGGCAGCTGCTCGCTaGGTAGAGTACCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVAAAR*VEYLLE
Trigger: TTCCAGCAGGTACTCTACCCAGCGAGCAGCTGCCAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCTCTAGAGGTTGCTaGGACTGGGTTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSSRGC*DWVREG
Trigger: ACCTTCTCTAACCCAGTCCCAGCAACCTCTAGAGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTTTTACCCTCTTTCTaGGCACCGTCTGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFLPSF*APSAAT
Trigger: TGTTGCAGCAGACGGTGCCCAGAAAGAGGGTAAAAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTATGCCATTCGGCTCTaGTTTCACCAAGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYAIRL*FHQGTL
Trigger: GAGAGTACCTTGGTGAAACCAGAGCCGAATGGCATA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAGAGATACCAGGGATaGTTATGCCATTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKRYQG*LCHSAL
Trigger: CAGAGCCGAATGGCATAACCATCCCTGGTATCTCTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGAGGAGATGCCACTaGTCCTTCTTTCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRRRCH*SFFLCV
Trigger: GACACAAAGAAAGAAGGACCAGTGGCATCTCCTCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATTCTGCCCGGACTCTaGGATGTTGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKILPGL*DVARRV
Trigger: CACCCTCCTGGCAACATCCCAGAGTCCGGGCAGAAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATGTGCCCTTCCTGCTaGACGTCATGGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKMCPSC*TSWQEA
Trigger: AGCCTCCTGCCATGACGTCCAGCAGGAAGGGCACAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGCCTGAGAGATTCATaGCATCTCGGGCCCAATTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCLRDS*HLGPNC
Trigger: ACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCATTGAGCGCCAAATaGGGTAGCTGGAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPLSAK*GSWKAI
Trigger: TATGGCTTTCCAGCTACCCCATTTGGCGCTCAATGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCACAGGTTGGAACTaGCCAAGTGGCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPTGWN*PSGCGA
Trigger: AGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCGCAGGTTGGAGCCTaGGGGGTTGCTGATGGATTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPQVGA*GVADGF
Trigger: AAATCCATCAGCAACCCCCCAGGCTCCAACCTGCGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGGTTTTTGTCCTGTaGTTCGGATTCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVVFVL*FGFLRE
Trigger: CTCCCTCAAGAATCCGAACCACAGGACAAAAACCAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTCGCCTTGGATAGTTaGTACTGGCTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFALDS*YWLGNW
Trigger: CCAGTTTCCCAGCCAGTACCAACTATCCAAGGCGAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCATTGGAGTCACAGATaGCGCTCCGGCGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPHWSHR*RSGGRS
Trigger: GCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAATG...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGACCTTTAAGGATCTaGCGGCACCAGCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRPLRI*RHQLLR
Trigger: TCTAAGAAGCTGGTGCCGTCAGATCCTTAAAGGTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCATTTAAGATCGCGGTaGATGATAGGTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLHLRSR*MIGGVR
Trigger: TCGAACTCCACCTATCATTCACCGCGATCTTAAATG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTCTCCAATCTTGACTaGGCCAGTAGGGCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVSNLD*ASRAGD
Trigger: ATCACCGGCCCTACTGGCTCAGTCAAGATTGGAGAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTAGCCATGGTCTTGTaGTCACCTTCACAGACATAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLAMVL*SPSQTY
Trigger: GTATGTCTGTGAAGGTGATCACAAGACCATGGCTAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAGACAGAGGATCCCTaGCCACTGTCAACCGTCCCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKTEDP*PLSTVP
Trigger: TGGGACGGTTGACAGTGGTCAGGGATCCTCTGTCTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATGTTGGGAACCATATaGAACTGTCTGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLMLGTI*NCLLAA
Trigger: AGCAGCCAACAGACAGTTTCATATGGTTCCCAACAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGGGTTGGAAGTGGTaGGTTTGGGCTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRGWKW*VWASRK
Trigger: CTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTCAAAGACAGAACTTaGAGTAGGGCCCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFKDRT*SRAPLY
Trigger: GTACAAGGGGGCCCTACTTCAAGTTCTGTCTTTGAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGCTCTCATTGTTATaGGTTAACACAGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLSLL*VNTAGA
Trigger: TGCGCCTGCTGTGTTAACTCATAACAATGAGAGCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCACCTCCTTCTCCTaGAGAGGAGCTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSTSFS*RGAWCV
Trigger: CACACACCAAGCTCCTCTTCAGGAGAAGGAGGTGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATGGATAAAGGGCATTaGGACGTCAGAGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSMDKGH*DVRAKR
Trigger: CCTTTTGGCTCTGACGTCTCAATGCCCTTTATCCAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATACTGCACTGTCTGTTaGGGAGGGGCTGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYCTVC*GGAVCC
Trigger: ACAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTCCAGCTGATACTTaGGGCAAGACTTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFPADT*GKTCGA
Trigger: AGCTCCACAAGTCTTGCCTCAAGTATCAGCTGGAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTCTGTTTTCCAGCTaGTACTTGAGGCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTLFSS*YLRQDL
Trigger: CAAGTCTTGCCTCAAGTATCAGCTGGAAAACAGAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340908.9
ENST00000535572.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGGAAAGTACTGGTaGTTCAGACACAGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAGKYW*FRHRWY
Trigger: ATACCACCTGTGTCTGAATCACCAGTACTTTCCAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAACTGCAGGTATTGTaGTACTTGAAACTACGCTGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQLQVL*YLKLRW
Trigger: CCAGCGTAGTTTCAAGTATCACAATACCTGCAGTTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTGGGGACTTGAAGTaGCGGGGATGTAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCGDLK*RGCSRY
Trigger: ATATCTACTACATCCCCGTCACTTCAAGTCCCCACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATGAGCTGTGTTCACTaGACAGAGACCGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSMSCVH*TETAAF
Trigger: AAAAGCTGCGGTCTCTGTTCAGTGAACACAGCTCAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGAGACAGAGGCATGCTaGGCTCCAGATGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKETEAC*APDELC
Trigger: ACACAGCTCATCTGGAGCTCAGCATGCCTCTGTCTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGTTCCTGCTTCTGTaGTTGCTGTTGGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVFLLL*LLLEPP
Trigger: TGGCGGCTCCAACAGCAATCACAGAAGCAGGAACAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGTAGTTGTCACCTaGAAACGTCCAACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAVVVT*KRPTLV
Trigger: TACCAAGGTTGGACGTTTTCAGGTGACAACTACAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTTGTCCTCAGTTTTTaGTACAGAGAAACGACCCAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLVLSF*YRETTH
Trigger: GTGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTCTTTGAGCTCAGCTaGTGGGGCGAGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLFELS*WGECGL
Trigger: TAGTCCACACTCGCCCCATCAGCTGAGCTCAAAGAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCGACTCTGCAGGTCCTaGATCTCTTTGAGATGTTTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRLCRS*ISLRCL
Trigger: TAAACATCTCAAAGAGATTCAGGACCTGCAGAGTCG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATCACTGGTGAAGGCTaGATAGAGGTTGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSITGEG*IEVVTG
Trigger: TCCAGTGACAACCTCTATTCAGCCTTCACCAGTGAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGAAAGGCTTGGTACTaGAATGGCACCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRKAWY*NGTITG
Trigger: ACCAGTGATGGTGCCATTTCAGTACCAAGCCTTTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGCTGCTGGTTCCTTaGCCTGGAGCAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVLLVP*PGAERL
Trigger: AAGCCTTTCTGCTCCAGGTCAAGGAACCAGCAGCAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTTCCTCTCCTGCCTaGGAGATTCATGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKASSPA*EIHGIS
Trigger: CGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAATTTTCTCCATCTGTaGCTTTTCACTATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNFLHL*LFTIRF
Trigger: GAACCTGATAGTGAAAAGTCACAGATGGAGAAAATT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTAGTACCCCAAGCTaGGAAATGCATGGTACATGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCSTPS*EMHGTC
Trigger: ACATGTACCATGCATTTCTCAGCTTGGGGTACTACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAGCTGTTTTCCAGCTaGTACTTGAGGCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKLFSS*YLRQDL
Trigger: CAAGTCTTGCCTCAAGTATCAGCTGGAAAACAGCTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCACTGGAAGGAAATaGGCACCAGAGTGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPTGRK*APEWTG
Trigger: TCCAGTCCACTCTGGTGCTCATTTCCTTCCAGTGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGACACATGAGGAGTTaGTATGGGAATCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRHMRS*YGNLRD
Trigger: GTCTCTCAGATTCCCATATCAACTCCTCATGTGTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGAAGGGTTGGAAGCTaGCTAGGAACCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRRVGS*LGTTVD
Trigger: ATCAACTGTGGTTCCTAGTCAGCTTCCAACCCTTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGAGGGAGCAATATTTaGATCTCCTGGGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRGSNI*ISWVLW
Trigger: CCACAGTACCCAGGAGATTCAAATATTGCTCCCTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTACACTGGGCGGTCTTTaGTGGTACTGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITTLGGL*WYCWGQ
Trigger: CTGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGT...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTAGCCCGCTTCAGGGTTaGCAGACCGAGGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPSPLQG*QTEVSN
Trigger: ATTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCT...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCGTACCAACTGCCGCTaGTCTCGTTTCCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRTNCR*SRFLLI
Trigger: AATTAAGAGGAAACGAGAGCAGCGGCAGTTGGTACG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGGATTGTTCTACCTaGTGTTTGAGACTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLDCST*CLRLLS
Trigger: AGAGAGCAGTCTCAAACAGCAGGTAGAACAATCCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTGCCTGTAGAATGTaGCTGTTCATGTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCACRM*LFMLGT
Trigger: GGTTCCCAACATGAACAGGCACATTCTACAGGCACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATGGGGCTGAGACTGTaGTTGGACAGTAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSMGLRL*LDSRRY
Trigger: ATACCTTCTACTGTCCAAGCACAGTCTCAGCCCCAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGATTCAAGTCCACTaGAACCTGCCGATTTCGGTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLIQVH*NLPISV
Trigger: TACCGAAATCGGCAGGTTGCAGTGGACTTGAATCAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGACTCACTGGCTGTaGAGTAGTGGCCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLTHWL*SSGLTG
Trigger: TCCAGTGAGGCCACTACTGCACAGCCAGTGAGTCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGGGTCTGTGCTACTaGAACTGGCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLGLCY*NWLCRS
Trigger: GCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGTAGCTTGGGTCTGTaGTACTGCAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGSLGL*YCNWLC
Trigger: GCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATGGGACGTTCTCATTaGCATCACTCATACCTGAAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLMGRSH*HHSYLK
Trigger: CTTCAGGTATGAGTGATGGCAATGAGAACGTCCCAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTAGTTCTTCCTTCATaGCTTCCACTGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVVLPS*LPLEDG
Trigger: CCCATCTTCCAGTGGAAGGCATGAAGGAAGAACTAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCAATCCAGTTGTACTaGTATGAGATGTCTTATCTA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPIQLY*YEMSYL
Trigger: TAGATAAGACATCTCATAGCAGTACAACTGGATTGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATAACTAGACACTCCTaGTCCAGGAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSITRHS*SRRGRG
Trigger: TCCTCTTCCTCTCCTGGAGCAGGAGTGTCTAGTTAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGAAGTAGGTCCTGCTaGTTGGGGAAGAATAGGAGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRSRSC*LGKNRS
Trigger: ACTCCTATTCTTCCCCAAGCAGCAGGACCTACTTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGGAGTTTGCTTGGTaGAACAGCAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQEFAW*NSSSWD
Trigger: ATCCCAACTACTGCTGTTGCACCAAGCAAACTCCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGAAAAGGTGGCAGCTaGTCGCTGGGTAGAGTACCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGKGGS*SLGRVP
Trigger: AGGTACTCTACCCAGCGAGCAGCTGCCACCTTTTCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTCTGGGCACCGTCTaGTGCAACAGAAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFLGTV*CNRNLK
Trigger: TTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAGAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTACCAGGGATGGTTATaGCATTCGGCTCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSYQGWL*HSALVS
Trigger: TGAAACCAGAGCCGAATGGCATAACCATCCCTGGTA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCAACCTTGGTAGGCTaGCCAGTGTCTGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPTLVG*PVSDFA
Trigger: GGCAAAGTCAGACACTGGGCAGCCTACCAAGGTTGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGGCTGTTCACTGTTaGCCCAACAGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLAVHC*PNSVCA
Trigger: AGCACAAACACTGTTGGGGCAACAGTGAACAGCCAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATTCATGTGCCCTTTaGTTCCTCTCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSNSCAL*FLSCLR
Trigger: TCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGATGTTGAAATTCTaGAAGGAGGCAGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLMLKF*KEAVPT
Trigger: TGTGGGAACTGCCTCCTTGCAGAATTTCAACATCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATTCTGAGGGCTCAATaGAGTATTAAAAACATTCCC +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDILRAQ*SIKNIP
Trigger: GGGAATGTTTTTAATACTGCATTGAGCCCTCAGAAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCCAAGCTGAGAAATaGATGGTACATGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPQAEK*MVHVQQ
Trigger: TTGTTGCACATGTACCATGCATTTCTCAGCTTGGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATAACACTGATTGGTTaGAGTTATTACTTACGGGGA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDITLIG*SYYLRG
Trigger: TCCCCGTAAGTAATAACTGCAACCAATCAGTGTTAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGTACTCTCCAAAACTaGTTGCTGGGAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSTLQN*LLGGCS
Trigger: ACTACATCCTCCCAGCAAGCAGTTTTGGAGAGTACT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCGCTAGGCTGGGACACTaGGCGGTCTTTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFARLGH*AVFAGT
Trigger: AGTACCAGCAAAGACCGCCCAGTGTCCCAGCCTAGC...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATATCATCCTGCTGCTaGCTCCGTTCCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKISSCC*LRSSCG
Trigger: GCCACAGGAGGAACGGAGCCAGCAGCAGGATGATAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGTCTGGGAAGCACTaGATTGTTCTACCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLSGKH*IVLPAV
Trigger: AACAGCAGGTAGAACAATCCAGTGCTTCCCAGACAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATAACACAGATATACTaGGTTGCTGGTACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDITQIY*VAGTVV
Trigger: AACTACAGTACCAGCAACCCAGTATATCTGTGTTAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGAGGATGTTGTATaGGTTGGGAAGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAEDVV*VGKMKP
Trigger: GGGTTTCATCTTCCCAACCCATACAACATCCTCAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGAGGCTGACTCACTaGCTGTGCAGTAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLRLTH*LCSSGL
Trigger: GAGGCCACTACTGCACAGCCAGTGAGTCAGCCTCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGTGCTACTGCAACTaGCTCTGCAGGAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLCYCN*LCRSNL
Trigger: CAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTCGGCTGGGTAGCTTaGGTCTGTGCTACTGCAACT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVGWVA*VCATAT
Trigger: AGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTTCATGCCTTCCACTaGAAGATGGGACGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLHAFH*KMGRSH
Trigger: ATGAGAACGTCCCATCTTCCAGTGGAAGGCATGAAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGAAGACGCAGGAATTaGTTGTTTGAACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGRRRN*LFELSF
Trigger: GAAGGAGAGTTCAAACAACCAATTCCTGCGTCTTCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTATTTGCTGTGGCATaGAAGACGCAGGAATTGGTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLFAVA*KTQELV
Trigger: AACCAATTCCTGCGTCTTCCATGCCACAGCAAATAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATGCCTATTTGCTGTaGCATGGAAGACGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNAYLL*HGRRRN
Trigger: ATTCCTGCGTCTTCCATGCCACAGCAAATAGGCATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTATGACTAAAGTTTaGAGGTGCTGTGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCMTKV*RCCVGS
Trigger: GGACCCAACACAGCACCTCCAAACTTTAGTCATACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGCTGCTGCTGTGGTTaGGACTCCAGCAATGCTACT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGCCCG*DSSNAT
Trigger: AGTAGCATTGCTGGAGTCCCAACCACAGCAGCAGCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAACGATCTCAGATGTaGATGTGGGGACTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQRSQM*MWGLEV
Trigger: CACTTCAAGTCCCCACATCCACATCTGAGATCGTTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTTGGGAAGCAAAGCTaGTTGAGGCTGACTATGAAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVGKQS*LRLTMN
Trigger: ATTCATAGTCAGCCTCAACCAGCTTTGCTTCCCAAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTTTACCCTCTTTCTaGGCACCGTCTGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFLPSF*APSAAT
Trigger: TGTTGCAGCAGACGGTGCCCAGAAAGAGGGTAAAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTATGCCATTCGGCTCTaGTTTCACCAAGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSYAIRL*FHQGTL
Trigger: GAGAGTACCTTGGTGAAACCAGAGCCGAATGGCATA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGAGGAGATGCCACTaGTCCTTCTTTCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRRRCH*SFFLCV
Trigger: GACACAAAGAAAGAAGGACCAGTGGCATCTCCTCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGATGGGGCGAGTGTaGACTACCGGAACCATCATC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLMGRV*TTGTII
Trigger: GATGATGGTTCCGGTAGTCCACACTCGCCCCATCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCACCTTGCCCAGTTTaGTATACAAAGATTCAATTT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAPCPV*YTKIQF
Trigger: AAATTGAATCTTTGTATACCAAACTGGGCAAGGTGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCAGGTTCGAGGTCATaGAGATGCACAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPGSRS*RCTVAQ
Trigger: CTGGGCAACTGTGCATCTCCATGACCTCGAACCTGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCAGTTCCCACAGGTTaGAACTGGCCAAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAVPTG*NWPSGC
Trigger: ACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGTTGTGTCGCAACTaGGATCTGAGGTTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGLCRN*DLRFAL
Trigger: CAAGGCGAACCTCAGATCCCAGTTGCGACACAACCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACGAGGTGGGAAGCCCTaGTACAGAACATCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRGGKP*YRTSPE
Trigger: CTCTGGAGATGTTCTGTACCAGGGCTTCCCACCTCG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATCTCCTGGGTACTGTaGTGGCAGTCGAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKISWVL*WQSRWE
Trigger: TTCCCACCTCGACTGCCACCACAGTACCCAGGAGAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGATTTATTCTAGATaGACAAAACTGCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQIYSR*TKLHAQ
Trigger: TTGGGCATGCAGTTTTGTCCATCTAGAATAAATCTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTACTTTGTCAAAACTaGCTGGCTTCACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLCQN*LASPPH
Trigger: ATGAGGGGGTGAAGCCAGCCAGTTTTGACAAAGTAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCATTTAAGATCGCGGTaGATGATAGGTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSHLRSR*MIGGVR
Trigger: TCGAACTCCACCTATCATTCACCGCGATCTTAAATG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGGTCTCCAATCTTGACTaGGCCAGTAGGGCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKVSNLD*ASRAGD
Trigger: ATCACCGGCCCTACTGGCTCAGTCAAGATTGGAGAC...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACATCTCAGGGGCCATaGACTCTGGGGTACCTATCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTSQGP*TLGYLS
Trigger: TGATAGGTACCCCAGAGTTCATGGCCCCTGAGATGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTAGCCATGGTCTTGTaGTCACCTTCACAGACATAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLAMVL*SPSQTY
Trigger: GTATGTCTGTGAAGGTGATCACAAGACCATGGCTAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATGTTGGGAACCATATaGAACTGTCTGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSMLGTI*NCLLAA
Trigger: AGCAGCCAACAGACAGTTTCATATGGTTCCCAACAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCAGGTGGGAGGTGGTaGAAAAGAAACTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAGGRW*KRNWTF
Trigger: GAACGTCCAGTTTCTTTTTCACCACCTCCCACCTGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATTCCCTGCTGCTGCTaGGGATGTTGTATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKIPCCC*GCCMGW
Trigger: CCAACCCATACAACATCCTCAGCAGCAGCAGGGAAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTCTGTTTTCCAGCTaGTACTTGAGGCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTLFSS*YLRQDL
Trigger: CAAGTCTTGCCTCAAGTATCAGCTGGAAAACAGAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340908.9
ENST00000535572.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTCATTCCAGGGCTCTaGGCTGTAGAGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFIPGL*AVEAAT
Trigger: AGTTGCTGCCTCTACAGCTCAGAGCCCTGGAATGAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATGTTGGTCCTGTATaGCTAAAGTTTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNVGPV*LKFGGA
Trigger: AGCACCTCCAAACTTTAGTCATACAGGACCAACATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATATGGGGAGACCACCTaGAGTTACCACACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYGETT*SYHTCA
Trigger: AGCACAGGTGTGGTAACTTCAGGTGGTCTCCCCATA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAACTGCAGGTATTGTaGTACTTGAAACTACGCTGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQLQVL*YLKLRW
Trigger: CCAGCGTAGTTTCAAGTATCACAATACCTGCAGTTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGGATGTGGGGACTTaGAGTGACGGGGATGTAGTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVDVGT*SDGDVV
Trigger: TACTACATCCCCGTCACTTCAAGTCCCCACATCCAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGTAGAAGCTATCACTaGTGGAATGACCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSRSYH*WNDQRM
Trigger: CATCCTTTGGTCATTCCATCAGTGATAGCTTCTACT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTGCAACAGAAACCTaGAATCGTCCCATCTTAAAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAATET*NRPILK
Trigger: TTTTAAGATGGGACGATTTCAGGTTTCTGTTGCAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTTGTCCTCAGTTTTTaGTACAGAGAAACGACCCAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLVLSF*YRETTH
Trigger: GTGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCGACTCTGCAGGTCCTaGATCTCTTTGAGATGTTTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRLCRS*ISLRCL
Trigger: TAAACATCTCAAAGAGATTCAGGACCTGCAGAGTCG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTGCAAGTCATCTGTaGATGTGCCCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCASHL*MCPSCW
Trigger: CCAGCAGGAAGGGCACATTCACAGATGACTTGCACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTGTTTTTAACCACTaGTGCCAACCTAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSVFNH*CQPNFP
Trigger: TGGGAAGTTAGGTTGGCATCAGTGGTTAAAAACAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTAGTACCCCAAGCTaGGAAATGCATGGTACATGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCSTPS*EMHGTC
Trigger: ACATGTACCATGCATTTCTCAGCTTGGGGTACTACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGACACATGAGGAGTTaGTATGGGAATCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRHMRS*YGNLRD
Trigger: GTCTCTCAGATTCCCATATCAACTCCTCATGTGTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAACGTGAGCAGAGGCTaGGTAATGCCAGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNVSRG*VMPAAI
Trigger: AATGGCAGCTGGCATTACTCAGCCTCTGCTCACGTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTTCGATATCATCCTaGTGCTGGCTCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSSISS*CWLRSS
Trigger: GGAGGAACGGAGCCAGCAGCAGGATGATATCGAAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGATTGTTCTACCTaGTGTTTGAGACTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLDCST*CLRLLS
Trigger: AGAGAGCAGTCTCAAACAGCAGGTAGAACAATCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGTTGATGTTGATCTaGCTCAGGTTCTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLLMLI*LRFFRF
Trigger: GAACCTGAAGAACCTGAGGCAGATCAACATCAACAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATCTGTACTGATAGGTaGAGAAATACTAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLICTDR*RNTREG
Trigger: CCCCTCTCTAGTATTTCTGCACCTATCAGTACAGAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYCNWL*RSNLRD
Trigger: GTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATGGGACGTTCTCATTaGCATCACTCATACCTGAAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSMGRSH*HHSYLK
Trigger: CTTCAGGTATGAGTGATGGCAATGAGAACGTCCCAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTCACCATAATTGTTaGTATCTCCTCGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVHHNC*YLLGVV
Trigger: GACAACCCCGAGGAGATAGCAACAATTATGGTGAAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTAAAGTTTGGAGGTaGTGTGTTGGGTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTKVWR*CVGSFC
Trigger: ACAGAAGGACCCAACACAGCACCTCCAAACTTTAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGGGACTCCAGCAATaGTACTTAAGAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLGLQQ*YLRKEV
Trigger: TACCTCCTTTCTTAAGTAGCATTGCTGGAGTCCCAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACACAGTAGTGCTGCCTaGTGCCTGCTGAGATACTAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKHSSAA*CLLRYY
Trigger: GTAGTATCTCAGCAGGCAGCAGGCAGCACTACTGTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTGGGGTAGAAACTTaGCCAGGTGTGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTGVET*PGVTTG
Trigger: ACCAGTGGTCACACCTGGGCAAGTTTCTACCCCAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGGGCACCGTCTGCTaGAACAGAAACCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLGTVC*NRNLKS
Trigger: CGATTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACGACCCACTTTGTTTaGTGTAGTTGTCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTTHFV*CSCHLK
Trigger: TTTCAGGTGACAACTACAGCAAACAAAGTGGGTCGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAAGATTCAATTTCATaGTTCTGGCGACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKDSIS*FWRLCR
Trigger: CCTGCAGAGTCGCCAGAAGCATGAAATTGAATCTTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGCAGGGGGCACCTTaGCCAGTTTGGTATACAAAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQQGAP*PVWYTK
Trigger: CTTTGTATACCAAACTGGGCAAGGTGCCCCCTGCTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTTTGGCATAACCACTaGTGGACTGCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLWHNH*WTAGVT
Trigger: TGTGACCCCAGCAGTCCAGCAGTGGTTATGCCAAAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCCAAGCTGAGAAATaGATGGTACATGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPQAEK*MVHVQQ
Trigger: TTGTTGCACATGTACCATGCATTTCTCAGCTTGGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTCTCCAAAACTGCTTaGTGGGAGGATGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLSKTA*WEDVVG
Trigger: CCCCACTACATCCTCCCAGCAAGCAGTTTTGGAGAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGTACTCTCCAAAACTaGTTGCTGGGAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSTLQN*LLGGCS
Trigger: ACTACATCCTCCCAGCAAGCAGTTTTGGAGAGTACT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTCAGACAGGAATTTaGTCTACTCAGCCAACAACA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSQTGI*STQPTT
Trigger: TGTTGTTGGCTGAGTAGAGCAAATTCCTGTCTGAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS-3UTR CCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGATATCATCCTGCTGCTaGCTCCGTTCCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKISSCC*LRSSCG
Trigger: GCCACAGGAGGAACGGAGCCAGCAGCAGGATGATAT...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGCGACTTCCACGGTaGTTTCAGTGTCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRRLPR*FQCPDL
Trigger: AAGGTCTGGACACTGAAACCACCGTGGAAGTCGCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTCCTGTTTCCTCTTaGAAGAAGGCATGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTPVSS*KKAWFK
Trigger: TTTGAACCATGCCTTCTTCCAAGAGGAAACAGGAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTATGAAACTGTCTGTTaGCTGCTCACTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYETVC*LLTRDS
Trigger: AGAATCTCGAGTGAGCAGCCAACAGACAGTTTCATA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGTGGAAGAAGACTTTaGCCAACAGTCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGGRRL*PTVLSR
Trigger: CCTGCTGAGGACTGTTGGCCAAAGTCTTCTTCCACC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGATGTTGTATGGGTTaGGAAGATGAAACCCCTGTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGCCMG*EDETPV
Trigger: AACAGGGGTTTCATCTTCCCAACCCATACAACATCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCCTGATCACCCTCTaGTTCCACACTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSLITL*FHTDIL
Trigger: GAGGATGTCAGTGTGGAACCAGAGGGTGATCAGGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAAGACGCAGGAATTaGTTGTTTGAACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGRRRN*LFELSF
Trigger: GAAGGAGAGTTCAAACAACCAATTCCTGCGTCTTCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATGCCTATTTGCTGTaGCATGGAAGACGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSNAYLL*HGRRRN
Trigger: ATTCCTGCGTCTTCCATGCCACAGCAAATAGGCATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTCCTTCTGTCATTTaGGCACGTCTAAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGPSVI*ARLSSE
Trigger: TTCTGAACTTAGACGTGCCCAAATGACAGAAGGACC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTATGACTAAAGTTTaGAGGTGCTGTGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCMTKV*RCCVGS
Trigger: GGACCCAACACAGCACCTCCAAACTTTAGTCATACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAAAGGAGGTACTACTaGAAATGTTGGTCCTGTATG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLERRYY*KCWSCM
Trigger: CATACAGGACCAACATTTCCAGTAGTACCTCCTTTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTACCACACCTGTGCTaGTGGCAACTCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLPHLC*WQLQQS
Trigger: GGATTGCTGGAGTTGCCACCAGCACAGGTGTGGTAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTCAGATGTGGATGTaGGGACTTGAAGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSQMWM*GLEVTG
Trigger: CCCCGTCACTTCAAGTCCCCACATCCACATCTGAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGCTGTACCAAGGGTaGGATACTAGGTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRLYQG*DTRYLG
Trigger: CCCCAAGTACCTAGTATCCCACCCTTGGTACAGCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTACAGCAGGCACATTaGCAACAGGCTGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVQQAH*QQAVPR
Trigger: CCTTGGTACAGCCTGTTGCCAATGTGCCTGCTGTAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTGGGAAGCAAAGCTaGTTGAGGCTGACTATGAAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVGKQS*LRLTMN
Trigger: ATTCATAGTCAGCCTCAACCAGCTTTGCTTCCCAAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCAGGTGTGACCACTaGTGTAACTGGCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPRCDH*CNWQSN
Trigger: GTTGCTTTGCCAGTTACACCAGTGGTCACACCTGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGAGGTTGCTGGGACTaGGTTAGAGAAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRGCWD*VREGPG
Trigger: TCCAGGACCTTCTCTAACCCAGTCCCAGCAACCTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTCTGTGATTGCTGTTaGAGCCGCCATGGACACAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFCDCC*SRHGHR
Trigger: CCTGTGTCCATGGCGGCTCCAACAGCAATCACAGAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGACTCTGAGGTGCTaGATTCAAAATGAACAGACT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRTLRC*IQNEQT
Trigger: AGTCTGTTCATTTTGAATCCAGCACCTCAGAGTCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGCTTCTCTTTCTTTaGTATCACAGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRLLFL*YHSRKN
Trigger: GTTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGTGTTTGTGCTGCTaGTTCCTTGACCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQCLCC*FLDLEQ
Trigger: CTGCTCCAGGTCAAGGAACCAGCAGCACAAACACTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCCAAATGGGGTAGCTaGAAAGCCATACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAKWGS*KAILLW
Trigger: CCACAGCAGTATGGCTTTCCAGCTACCCCATTTGGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCCATTCCAATAACTaGAGCGGGGGAGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSHSNN*SGGDSP
Trigger: TGGAGAGTCTCCCCCGCTCCAGTTATTGGAATGGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTATATGACAGTCACTaGCCAGGCATCACGTTTGTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLYDSH*PGITFV
Trigger: AACAAACGTGATGCCTGGCCAGTGACTGTCATATAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAGCTGAGAAATGCATaGTACATGTGCAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKLRNA*YMCNKR
Trigger: CCTCTTGTTGCACATGTACCATGCATTTCTCAGCTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAATATGCCATTGACGTaGGTAAAAGGTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNMPLT*VKGWKY
Trigger: ATATTTCCAACCTTTTACCCACGTCAATGGCATATT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATAGTTGGTACTGGCTaGGAAACTGGAAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLIVGTG*ETGSCF
Trigger: AAAACAGCTTCCAGTTTCCCAGCCAGTACCAACTAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGCACCAGAGTGGACTaGAACAACCGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSTRVD*NNRGLC
Trigger: ACACAACCCTCGGTTGTTCCAGTCCACTCTGGTGCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGCTGCAGAAGGGTTaGAAGCTGACTAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRLQKG*KLTRNH
Trigger: GTGGTTCCTAGTCAGCTTCCAACCCTTCTGCAGCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGTCCAAGGTTAGCTaGTATTCCCATGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLSKVS*YSHGLN
Trigger: GTTCAGTCCATGGGAATACCAGCTAACCTTGGACAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATAGGACTGTAGAATaGATGCAAACAGAAGCCACG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSDRTVE*MQTEAT
Trigger: CGTGGCTTCTGTTTGCATCCATTCTACAGTCCTATC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCAAAACTGCTTGCTaGGAGGATGTAGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSKTAC*EDVVGA
Trigger: AGCCCCCACTACATCCTCCCAGCAAGCAGTTTTGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGTTCTACAGAGCTaGTTGCAAGGACAGACTTTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLVLQS*LQGQTF
Trigger: AAAAGTCTGTCCTTGCAACCAGCTCTGTAGAACCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530271.6
3UTR CAA 72 bp AGTGGTGGTGGTGGTGGTGATTCCCAGAATATGCCATaGACGTGGGTAAAAGGTTGGAAATATTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SGGGGGDSQNMP*TWVKGWKYFQF
Trigger: AAACTGAAAATATTTCCAACCTTTTACCCACGTCAATGGCATATTCTGGGAATCACCACCACCACCACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCACTCGAGATTCTGTaGAGACAGAGGATCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSLEIL*RQRIPD
Trigger: GTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGGAAAAATATCTGTaGTTCTGGGTATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSWEKYL*FWVCWG
Trigger: ACCCCAACATACCCAGAATCACAGATATTTTTCCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGAGGCAGTTCTTCTTaGTTCAAGTCCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGGSSS*FKSTAT
Trigger: GGTTGCAGTGGACTTGAATCAAGAAGAACTGCCTCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATAATTTCTCGCACTTaGTCCACAAACGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSIISRT*STNDSL
Trigger: GAGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAATTTCTGAGAACCTaGAAAGCCATAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQFLRT*KAIVIL
Trigger: AAGGATGACTATGGCTTTTCAGGTTCTCAGAAATTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGGAATTGGTTGTTTaGACTCTCCTTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQELVV*TLLPIS
Trigger: AGAAATTGGAAGGAGAGTTCAAACAACCAATTCCTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATGTTGGTCCTGTATaGCTAAAGTTTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSNVGPV*LKFGGA
Trigger: AGCACCTCCAAACTTTAGTCATACAGGACCAACATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGTATTGTGATACTTaGAACTACGCTGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRYCDT*NYAGKY
Trigger: GTACTTTCCAGCGTAGTTTCAAGTATCACAATACCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGATGTAGTAGATATTaGGACAACTGCAGGTATTGT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGCSRY*DNCRYC
Trigger: ACAATACCTGCAGTTGTCTCAATATCTACTACATCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCAGTTGTACTGCTATaGGATGTCTTATCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPVVLL*DVLSSE
Trigger: CTCACTAGATAAGACATCTCATAGCAGTACAACTGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTATCACTGATGGAATaGCCAAAGGATGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLSLME*PKDAAH
Trigger: GTGGGCTGCATCCTTTGGTCATTCCATCAGTGATAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGTAGAAGCTATCACTaGTGGAATGACCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSRSYH*WNDQRM
Trigger: CATCCTTTGGTCATTCCATCAGTGATAGCTTCTACT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCAGGTTTCACTCCTaGTGTAGTAGTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSRFHS*CSSADW
Trigger: CCAGTCAGCACTACTACATCAGGAGTGAAACCTGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGCAACAGAAACCTaGAATCGTCCCATCTTAAAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAATET*NRPILK
Trigger: TTTTAAGATGGGACGATTTCAGGTTTCTGTTGCAGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTGCTGGATTCAAAATaGACAGACTTTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVLDSK*TDFASS
Trigger: AGAAGATGCAAAGTCTGTTCATTTTGAATCCAGCAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTCTCTGGCACATCTaGAGAGATACCAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTLWHI*RDTRDG
Trigger: ACCATCCCTGGTATCTCTTCAGATGTGCCAGAGAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTTTCTTTGTGTCAGTaGTCTTGTCCTCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLSLCQ*SCPQFL
Trigger: CAAAAACTGAGGACAAGATCACTGACACAAAGAAAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAATTACTAAGGCTTTaGCTTAGATTCTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLELLRL*LRFWLG
Trigger: TCCTAGCCAGAATCTAAGTCAAAGCCTTAGTAATTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTCATCTTCGATATCTaGCTCATTGTCGCTACTCAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFIFDI*LIVATH
Trigger: ATGAGTAGCGACAATGAGTCAGATATCGAAGATGAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTGAAGCTGCACTCTaGCCAGACAGGTTACCTGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTEAAL*PDRLPE
Trigger: TTCAGGTAACCTGTCTGGTCAGAGTGCAGCTTCAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGCACCATCACTGGTaGAGGCTGAATAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWHHHW*RLNRGC
Trigger: ACAACCTCTATTCAGCCTTCACCAGTGATGGTGCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGGAAAGCATGGTCTaGAGCTGCCCCTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQESMV*SCPLTK
Trigger: TTTTGTCAAGGGGCAGCTTCAGACCATGCTTTCCTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGTGGTGGTGGTGGTaGTTCCCAGAATATGCCATT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWWWWW*FPEYAI
Trigger: AATGGCATATTCTGGGAATCACCACCACCACCACCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTTCGATATCATCCTGCTaGTGGCTCCGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITSISSC*WLRSSC
Trigger: ACAGGAGGAACGGAGCCAGCAGCAGGATGATATCGA...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCTCTTCGATATCATCCTaGTGCTGGCTCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFSSISS*CWLRSS
Trigger: GGAGGAACGGAGCCAGCAGCAGGATGATATCGAAGA...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTAGCAGAAGGGAGCTaGTTGATTCCTGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLAEGS*LIPVWE
Trigger: TTCCCAGACAGGAATCAAGCAGCTCCCTTCTGCTAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGTTGATGTTGATCTaGCTCAGGTTCTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLMLI*LRFFRF
Trigger: GAACCTGAAGAACCTGAGGCAGATCAACATCAACAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATGAGTTGTATGGAATaGCCTCATACTGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSMSCME*PHTVLP
Trigger: TGGCAGAACAGTATGAGGGCATTCCATACAACTCAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATCTGTACTGATAGGTaGAGAAATACTAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSICTDR*RNTREG
Trigger: CCCCTCTCTAGTATTTCTGCACCTATCAGTACAGAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGGGACTCCAGCAATaGTACTTAAGAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLGLQQ*YLRKEV
Trigger: TACCTCCTTTCTTAAGTAGCATTGCTGGAGTCCCAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAGTTACCACACCTGTaGTGGTGGCAACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKLPHL*WWQLQQ
Trigger: TTGCTGGAGTTGCCACCAGCACAGGTGTGGTAACTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACGACCCACTTTGTTTaGTGTAGTTGTCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTTHFV*CSCHLK
Trigger: TTTCAGGTGACAACTACAGCAAACAAAGTGGGTCGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCATAAAAGGAGGAGATaGCACTGGTCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSHKRRR*HWSFFL
Trigger: AAGAAAGAAGGACCAGTGGCATCTCCTCCTTTTATG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAAGATTCAATTTCATaGTTCTGGCGACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSKDSIS*FWRLCR
Trigger: CCTGCAGAGTCGCCAGAAGCATGAAATTGAATCTTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAACAGTGTTTGTGCTaGTGGTTCCTTGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQQCLC*WFLDLE
Trigger: CTCCAGGTCAAGGAACCAGCAGCACAAACACTGTTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATGCATGGTACATGTaGAACAAGAGGAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNAWYM*NKRKAI
Trigger: GATTGCTTTCCTCTTGTTGCACATGTACCATGCATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACATTCCCACGGCCTTaGTCTCCAGCTCTTCGATAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTFPRP*SPALRY
Trigger: ATATCGAAGAGCTGGAGACCAAGGCCGTGGGAATGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGAGGCGACTTCCACGGTaGTTTCAGTGTCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKRRLPR*FQCPDL
Trigger: AAGGTCTGGACACTGAAACCACCGTGGAAGTCGCCT...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGGGCCATGAACTCTaGGGTACCTATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRGHEL*GTYHTL
Trigger: AAGAGTGTGATAGGTACCCCAGAGTTCATGGCCCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTTGTCAAAACTGGCTaGCTTCACCCCACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFVKTG*LHPTGH
Trigger: GTGACCAGTGGGGTGAAGCCAGCCAGTTTTGACAAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTACTTTGTCAAAACTaGCTGGCTTCACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLLCQN*LASPHW
Trigger: CCAGTGGGGTGAAGCCAGCCAGTTTTGACAAAGTAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTTGGAAGAAGGCATaGTTCAAAAGGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSWKKA*FKRSLM
Trigger: CATCAAAGACCTTTTGAACCATGCCTTCTTCCAAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTCCTGTTTCCTCTTaGAAGAAGGCATGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTPVSS*KKAWFK
Trigger: TTTGAACCATGCCTTCTTCCAAGAGGAAACAGGAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTATGAAACTGTCTGTTaGCTGCTCACTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSYETVC*LLTRDS
Trigger: AGAATCTCGAGTGAGCAGCCAACAGACAGTTTCATA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTGCCTGTTCATGTTaGGAACCATATGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSCACSC*EPYETV
Trigger: GACAGTTTCATATGGTTCCCAACATGAACAGGCACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACATAACTACGGCCTCTaGTGTCCAGTTAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKHNYGL*CPVSWA
Trigger: AGCCCAACTAACTGGACACCAGAGGCCGTAGTTATG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAAACGGTCAATTCTaGGGCATGGTAATTATGCTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRNGQF*GMVIML
Trigger: AAGCATAATTACCATGCCCCAGAATTGACCGTTTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTCTGGGCTTCCTATTaGCCAGTTCTGTCCGATAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFWASY*PVLSDR
Trigger: CCTATCGGACAGAACTGGCCAATAGGAAGCCCAGAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATCACTGGAATATTCTaGGCTTCCTATTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSITGIF*ASYWPV
Trigger: AACTGGCCAATAGGAAGCCCAGAATATTCCAGTGAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGACCTGCTGAGATGTaGTTCCTTGGGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRPAEM*FLGGNR
Trigger: TCTGTTTCCCCCAAGGAACCACATCTCAGCAGGTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGAGGCAAGACTTGTaGAGCTTGAGGCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLRQDL*SLRLTH
Trigger: GTGAGTCAGCCTCAAGCTCCACAAGTCTTGCCTCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCTTCCACTGGAAGATaGGACGTTCTCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPSTGR*DVLIAI
Trigger: GATGGCAATGAGAACGTCCCATCTTCCAGTGGAAGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGGAGGTGCTGTGTTaGGTCCTTCTGTCATTTGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLEVLC*VLLSFG
Trigger: CCCAAATGACAGAAGGACCCAACACAGCACCTCCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAAGGAGGTACTACTaGAAATGTTGGTCCTGTATG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSERRYY*KCWSCM
Trigger: CATACAGGACCAACATTTCCAGTAGTACCTCCTTTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGACACAGGTGGTATaGGGAGACCACCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQTQVV*GDHLKL
Trigger: TAACTTCAGGTGGTCTCCCCATACCACCTGTGTCTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTACTTGAAACTACGCTaGAAAGTACTGGTGATTCAG +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLYLKLR*KVLVIQ
Trigger: CTGAATCACCAGTACTTTCCAGCGTAGTTTCAAGTA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGGATACTAGGTACTTaGGGTAATAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGILGT*GNKGVE
Trigger: TTCTACACCTTTATTACCCCAAGTACCTAGTATCCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAATTCCAGGAGCTTTaGGTTGTGTATCAGAATCTA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQFQEL*VVYQNL
Trigger: TAGATTCTGATACACAACCCAAAGCTCCTGGAATTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGCAACAGCAGTAGTTaGGATGCCTGGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCNSSS*DAWCDS
Trigger: ACTGTCACACCAGGCATCCCAACTACTGCTGTTGCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTAGTAGTGCTGACTaGGGTAGAAACTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCSSAD*GRNLPR
Trigger: CCTGGGCAAGTTTCTACCCCAGTCAGCACTACTACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCTCTAGAGGTTGCTaGGACTGGGTTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSSRGC*DWVREG
Trigger: ACCTTCTCTAACCCAGTCCCAGCAACCTCTAGAGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCACTGTGATCATCTCTaGACTAAGTGTTCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLHCDHL*TKCSSQ
Trigger: TTGAGAAGAACACTTAGTCCAGAGATGATCACAGTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGACTCTGAGGTGCTaGATTCAAAATGAACAGACT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRTLRC*IQNEQT
Trigger: AGTCTGTTCATTTTGAATCCAGCACCTCAGAGTCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGCTTCTCTTTCTTTaGTATCACAGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSRLLFL*YHSRKN
Trigger: GTTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAAGCCATACTGCTGTaGGGGGCACATAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKAILL*GAHRLG
Trigger: ACCAAGTCTATGTGCCCCCCACAGCAGTATGGCTTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGAGAGCCCAGTAGGTaGTTTTTGTCCTGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKREPSR*FLSCGS
Trigger: CGAACCACAGGACAAAAACCACCTACTGGGCTCTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTATATGACAGTCACTaGCCAGGCATCACGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLYDSH*PGITFV
Trigger: AACAAACGTGATGCCTGGCCAGTGACTGTCATATAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAGCTGAGAAATGCATaGTACATGTGCAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSKLRNA*YMCNKR
Trigger: CCTCTTGTTGCACATGTACCATGCATTTCTCAGCTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATAGTTGGTACTGGCTaGGAAACTGGAAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSIVGTG*ETGSCF
Trigger: AAAACAGCTTCCAGTTTCCCAGCCAGTACCAACTAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTCGCCTTGGATAGTTaGTACTGGCTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFALDS*YWLGNW
Trigger: CCAGTTTCCCAGCCAGTACCAACTATCCAAGGCGAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAACAGAAGCCACGTTaGAAGAGGGAGCAATATTTG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSKQKPR*KREQYL
Trigger: CAAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTGTCAAAACTGGCTaGCTTCACCCCCTCATTTAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFVKTG*LHPLIY
Trigger: ATAAATGAGGGGGTGAAGCCAGCCAGTTTTGACAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGACCTTTAAGGATCTaGCGGCACCAGCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRPLRI*RHQLLR
Trigger: TCTAAGAAGCTGGTGCCGTCAGATCCTTAAAGGTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR TCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAAACTGGACGTTCATaGATAGTTGGGAAAAATATC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLETGRS*IVGKNI
Trigger: GATATTTTTCCCAACTATTCATGAACGTCCAGTTTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTAATCTTAGATTCTaGAGGTGTCCTACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSNLRF*RCPTRK
Trigger: TTTCCTGGTAGGACACCTTCAGAATCTAAGATTAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATGGATAAAGGGCATTaGGACGTCAGAGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKMDKGH*DVRAKR
Trigger: CCTTTTGGCTCTGACGTCTCAATGCCCTTTATCCAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAATTTCTGAGAACCTaGAAAGCCATAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQFLRT*KAIVIL
Trigger: AAGGATGACTATGGCTTTTCAGGTTCTCAGAAATTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGGAATTGGTTGTTTaGACTCTCCTTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQELVV*TLLPIS
Trigger: AGAAATTGGAAGGAGAGTTCAAACAACCAATTCCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTCAGACTGAATTACTaGTGTGGAAATGTCATTAGG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSLRLNY*CGNVIR
Trigger: CCTAATGACATTTCCACATCAGTAATTCAGTCTGAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTGTAACCTCAGACTaGATTACTGATGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSTVTSD*ITDVEM
Trigger: CATTTCCACATCAGTAATTCAGTCTGAGGTTACAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTGGAAAGTACTGGTaGTTCAGACACAGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAGKYW*FRHRWY
Trigger: ATACCACCTGTGTCTGAATCACCAGTACTTTCCAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTGGGGACTTGAAGTaGCGGGGATGTAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCGDLK*RGCSRY
Trigger: ATATCTACTACATCCCCGTCACTTCAAGTCCCCACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATGAGCTGTGTTCACTaGACAGAGACCGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKMSCVH*TETAAF
Trigger: AAAAGCTGCGGTCTCTGTTCAGTGAACACAGCTCAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGTGTTCTTCTCAATTaGGCATCAAGATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSVLLN*ASRSSR
Trigger: TCTAGAGGATCTTGATGCTCAATTGAGAAGAACACT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGCTGGATTCAAAATaGACAGACTTTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSVLDSK*TDFASS
Trigger: AGAAGATGCAAAGTCTGTTCATTTTGAATCCAGCAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTGTAGTTGTCACCTaGAAACGTCCAACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAVVVT*KRPTLV
Trigger: TACCAAGGTTGGACGTTTTCAGGTGACAACTACAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATTACTAAGGCTTTaGCTTAGATTCTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSELLRL*LRFWLG
Trigger: TCCTAGCCAGAATCTAAGTCAAAGCCTTAGTAATTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTCATCTTCGATATCTaGCTCATTGTCGCTACTCAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFIFDI*LIVATH
Trigger: ATGAGTAGCGACAATGAGTCAGATATCGAAGATGAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACCAGACAGGTTACCTaGAAGCTGGGGGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTRQVT*KLGAFI
Trigger: AATAAAAGCCCCCAGCTTTCAGGTAACCTGTCTGGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGAAAGGCTTGGTACTaGAATGGCACCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRKAWY*NGTITG
Trigger: ACCAGTGATGGTGCCATTTCAGTACCAAGCCTTTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGAGGGAGCAATATTTaGATCTCCTGGGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRGSNI*ISWVLW
Trigger: CCACAGTACCCAGGAGATTCAAATATTGCTCCCTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACGTACCAACTGCCGCTaGTCTCGTTTCCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRTNCR*SRFLLI
Trigger: AATTAAGAGGAAACGAGAGCAGCGGCAGTTGGTACG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTGCCTGTAGAATGTaGCTGTTCATGTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCACRM*LFMLGT
Trigger: GGTTCCCAACATGAACAGGCACATTCTACAGGCACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACAGTAGAAGGTATATaGCCTGGGACTGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTVEGI*PGTVPV
Trigger: TACAGGCACAGTCCCAGGGCATATACCTTCTACTGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATGGGGCTGAGACTGTaGTTGGACAGTAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKMGLRL*LDSRRY
Trigger: ATACCTTCTACTGTCCAAGCACAGTCTCAGCCCCAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTAGTTCTTCCTTCATaGCTTCCACTGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVVLPS*LPLEDG
Trigger: CCCATCTTCCAGTGGAAGGCATGAAGGAAGAACTAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTAGGAATGCCTATTTaGTGTGGCATGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVGMPI*CGMEDA
Trigger: TGCGTCTTCCATGCCACAGCAAATAGGCATTCCTAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATAACTAGACACTCCTaGTCCAGGAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKITRHS*SRRGRG
Trigger: TCCTCTTCCTCTCCTGGAGCAGGAGTGTCTAGTTAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGAAGTAGGTCCTGCTaGTTGGGGAAGAATAGGAGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRSRSC*LGKNRS
Trigger: ACTCCTATTCTTCCCCAAGCAGCAGGACCTACTTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTAGAAGTAGGTCCTaGTGCTTGGGGAAGAATAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCRSRS*CLGKNR
Trigger: CCTATTCTTCCCCAAGCAGCAGGACCTACTTCTACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGGAGTTTGCTTGGTaGAACAGCAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQEFAW*NSSSWD
Trigger: ATCCCAACTACTGCTGTTGCACCAAGCAAACTCCTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGATCCTCTAGAGGTTaGTGGGACTGGGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRSSRG*WDWVRE
Trigger: TTCTCTAACCCAGTCCCAGCAACCTCTAGAGGATCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTTCTGGGCACCGTCTaGTGCAACAGAAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFLGTV*CNRNLK
Trigger: TTTCAGGTTTCTGTTGCAGCAGACGGTGCCCAGAAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATACCAGGGATGGTTATaGCATTCGGCTCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYQGWL*HSALVS
Trigger: TGAAACCAGAGCCGAATGGCATAACCATCCCTGGTA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGGCTGTTCACTGTTaGCCCAACAGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLAVHC*PNSVCA
Trigger: AGCACAAACACTGTTGGGGCAACAGTGAACAGCCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAATTCATGTGCCCTTTaGTTCCTCTCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNSCAL*FLSCLR
Trigger: TCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATTCTGAGGGCTCAATaGAGTATTAAAAACATTCCC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLILRAQ*SIKNIP
Trigger: GGGAATGTTTTTAATACTGCATTGAGCCCTCAGAAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATAACACTGATTGGTTaGAGTTATTACTTACGGGGA +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLITLIG*SYYLRG
Trigger: TCCCCGTAAGTAATAACTGCAACCAATCAGTGTTAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCACATTCCCACGGCCTTaGTCTCCAGCTCTTCGATAT +
Preference number: 4 (lower is better)
Translates to: TNIENPISHKYNGSPPEFTFPRP*SPALRY
Trigger: ATATCGAAGAGCTGGAGACCAAGGCCGTGGGAATGT...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTTGGAAGAAGGCATaGTTCAAAAGGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSSWKKA*FKRSLM
Trigger: CATCAAAGACCTTTTGAACCATGCCTTCTTCCAAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGTCTGGGAAGCACTaGATTGTTCTACCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLSGKH*IVLPAV
Trigger: AACAGCAGGTAGAACAATCCAGTGCTTCCCAGACAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATAACACAGATATACTaGGTTGCTGGTACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLITQIY*VAGTVV
Trigger: AACTACAGTACCAGCAACCCAGTATATCTGTGTTAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTGTAAACTTGAGATaGTTCAAACATAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTVNLR*FKHRMD
Trigger: GTCCATCCTATGTTTGAACCATCTCAAGTTTACAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTGTGAGGAATCACTaGAATATTCTGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSFVRNH*NILGFL
Trigger: TAGGAAGCCCAGAATATTCCAGTGATTCCTCACAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCTGAGGATGTTGTATaGGTTGGGAAGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAEDVV*VGKMKP
Trigger: GGGTTTCATCTTCCCAACCCATACAACATCCTCAGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTTCATGCCTTCCACTaGAAGATGGGACGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLHAFH*KMGRSH
Trigger: ATGAGAACGTCCCATCTTCCAGTGGAAGGCATGAAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTACTTGAAACTACGCTaGAAAGTACTGGTGATTCAG +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSYLKLR*KVLVIQ
Trigger: CTGAATCACCAGTACTTTCCAGCGTAGTTTCAAGTA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAACGATCTCAGATGTaGATGTGGGGACTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQRSQM*MWGLEV
Trigger: CACTTCAAGTCCCCACATCCACATCTGAGATCGTTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTAGGTCCTGCTGCTTaGGGAAGAATAGGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVGPAA*GRIGVE
Trigger: TTCTACTCCTATTCTTCCCCAAGCAGCAGGACCTAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGATACTAGGTACTTaGGGTAATAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSGILGT*GNKGVE
Trigger: TTCTACACCTTTATTACCCCAAGTACCTAGTATCCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAATTCCAGGAGCTTTaGGTTGTGTATCAGAATCTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSQFQEL*VVYQNL
Trigger: TAGATTCTGATACACAACCCAAAGCTCCTGGAATTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGTAGTTGGGATGCCTaGTGTGACAGTGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSSWDA*CDSALY
Trigger: ATAGAGAGCACTGTCACACCAGGCATCCCAACTACT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGTCAGGAGTTTGCTTaGTGCAACAGCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSQEFA*CNSSSW
Trigger: CCAACTACTGCTGTTGCACCAAGCAAACTCCTGACT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCACTGTGATCATCTCTaGACTAAGTGTTCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSHCDHL*TKCSSQ
Trigger: TTGAGAAGAACACTTAGTCCAGAGATGATCACAGTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTTTTACCCTCTTTCTaGGCACCGTCTGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFLPSF*APSAAT
Trigger: TGTTGCAGCAGACGGTGCCCAGAAAGAGGGTAAAAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATATGCCATTCGGCTCTaGTTTCACCAAGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYAIRL*FHQGTL
Trigger: GAGAGTACCTTGGTGAAACCAGAGCCGAATGGCATA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAGAGATACCAGGGATaGTTATGCCATTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKRYQG*LCHSAL
Trigger: CAGAGCCGAATGGCATAACCATCCCTGGTATCTCTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGGTTTTTGTCCTGTaGTTCGGATTCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVVFVL*FGFLRE
Trigger: CTCCCTCAAGAATCCGAACCACAGGACAAAAACCAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGAGACCTTTAAGGATCTaGCGGCACCAGCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKRPLRI*RHQLLR
Trigger: TCTAAGAAGCTGGTGCCGTCAGATCCTTAAAGGTCT...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATGTTGGGAACCATATaGAACTGTCTGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKMLGTI*NCLLAA
Trigger: AGCAGCCAACAGACAGTTTCATATGGTTCCCAACAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAACTGGACGTTCATaGATAGTTGGGAAAAATATC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSETGRS*IVGKNI
Trigger: GATATTTTTCCCAACTATTCATGAACGTCCAGTTTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGACCTGTATCTCACATaGCTCTCCAGTTACTCTACT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDLYLT*LSSYST
Trigger: AGTAGAGTAACTGGAGAGTCATGTGAGATACAGGTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAACTGCAGGTATTGTaGTACTTGAAACTACGCTGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQLQVL*YLKLRW
Trigger: CCAGCGTAGTTTCAAGTATCACAATACCTGCAGTTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTTGTCCTCAGTTTTTaGTACAGAGAAACGACCCAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLVLSF*YRETTH
Trigger: GTGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACGACTCTGCAGGTCCTaGATCTCTTTGAGATGTTTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRLCRS*ISLRCL
Trigger: TAAACATCTCAAAGAGATTCAGGACCTGCAGAGTCG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATTTTCTCCATCTGTaGCTTTTCACTATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSNFLHL*LFTIRF
Trigger: GAACCTGATAGTGAAAAGTCACAGATGGAGAAAATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAGCTGTTTTCCAGCTaGTACTTGAGGCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKLFSS*YLRQDL
Trigger: CAAGTCTTGCCTCAAGTATCAGCTGGAAAACAGCTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR TCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTGCTCCAAGGTACACCTaGAACATACCTATCACACTC +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPAPRYT*NIPITL
Trigger: GAGTGTGATAGGTATGTTTCAGGTGTACCTTGGAGC...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGGATTGTTCTACCTaGTGTTTGAGACTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLDCST*CLRLLS
Trigger: AGAGAGCAGTCTCAAACAGCAGGTAGAACAATCCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGGACACTCTCCAATaGTTTAGAAAGCTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQDTLQ*FRKLFG
Trigger: GCCGAAAAGCTTTCTAAAGCATTGGAGAGTGTCCTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGATTCAAGTCCACTaGAACCTGCCGATTTCGGTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLIQVH*NLPISV
Trigger: TACCGAAATCGGCAGGTTGCAGTGGACTTGAATCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATGGGACGTTCTCATTaGCATCACTCATACCTGAAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKMGRSH*HHSYLK
Trigger: CTTCAGGTATGAGTGATGGCAATGAGAACGTCCCAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTTCACCATAATTGTTaGTATCTCCTCGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVHHNC*YLLGVV
Trigger: GACAACCCCGAGGAGATAGCAACAATTATGGTGAAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTAAAGTTTGGAGGTaGTGTGTTGGGTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTKVWR*CVGSFC
Trigger: ACAGAAGGACCCAACACAGCACCTCCAAACTTTAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCAATCCAGTTGTACTaGTATGAGATGTCTTATCTA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPIQLY*YEMSYL
Trigger: TAGATAAGACATCTCATAGCAGTACAACTGGATTGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGATGTTGAAATTCTaGAAGGAGGCAGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLMLKF*KEAVPT
Trigger: TGTGGGAACTGCCTCCTTGCAGAATTTCAACATCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATTCTGAGGGCTCAATaGAGTATTAAAAACATTCCC +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSILRAQ*SIKNIP
Trigger: GGGAATGTTTTTAATACTGCATTGAGCCCTCAGAAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCCAAGCTGAGAAATaGATGGTACATGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPQAEK*MVHVQQ
Trigger: TTGTTGCACATGTACCATGCATTTCTCAGCTTGGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATAACACTGATTGGTTaGAGTTATTACTTACGGGGA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSITLIG*SYYLRG
Trigger: TCCCCGTAAGTAATAACTGCAACCAATCAGTGTTAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATAACACAGATATACTaGGTTGCTGGTACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSITQIY*VAGTVV
Trigger: AACTACAGTACCAGCAACCCAGTATATCTGTGTTAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGATGTTGTATGGGTTaGGAAGATGAAACCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGCCMG*EDETPV
Trigger: AACAGGGGTTTCATCTTCCCAACCCATACAACATCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGAAGACGCAGGAATTaGTTGTTTGAACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGRRRN*LFELSF
Trigger: GAAGGAGAGTTCAAACAACCAATTCCTGCGTCTTCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTATTTGCTGTGGCATaGAAGACGCAGGAATTGGTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLFAVA*KTQELV
Trigger: AACCAATTCCTGCGTCTTCCATGCCACAGCAAATAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAATGCCTATTTGCTGTaGCATGGAAGACGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNAYLL*HGRRRN
Trigger: ATTCCTGCGTCTTCCATGCCACAGCAAATAGGCATT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGTCCTTCTGTCATTTaGGCACGTCTAAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGPSVI*ARLSSE
Trigger: TTCTGAACTTAGACGTGCCCAAATGACAGAAGGACC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTATGACTAAAGTTTaGAGGTGCTGTGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCMTKV*RCCVGS
Trigger: GGACCCAACACAGCACCTCCAAACTTTAGTCATACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTTGGGAAGCAAAGCTaGTTGAGGCTGACTATGAAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVGKQS*LRLTMN
Trigger: ATTCATAGTCAGCCTCAACCAGCTTTGCTTCCCAAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCACCTTGCCCAGTTTaGTATACAAAGATTCAATTT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSAPCPV*YTKIQF
Trigger: AAATTGAATCTTTGTATACCAAACTGGGCAAGGTGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCTGGTATTTTTCACTaGGTTCTAAAGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSPGIFH*VLKSKE
Trigger: TTCTTTGCTCTTTAGAACCCAGTGAAAAATACCAGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATATGCCATTGACGTaGGTAAAAGGTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNMPLT*VKGWKY
Trigger: ATATTTCCAACCTTTTACCCACGTCAATGGCATATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACATGAGGAGTTGATATaGGAATCTGAGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKHEELI*ESERQG
Trigger: ACCCTGTCTCTCAGATTCCCATATCAACTCCTCATG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGATAGGACTGTAGAATaGATGCAAACAGAAGCCACG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDRTVE*MQTEAT
Trigger: CGTGGCTTCTGTTTGCATCCATTCTACAGTCCTATC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCATTTAAGATCGCGGTaGATGATAGGTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: PRSTNIENPISHKYNGSPHLRSR*MIGGVR
Trigger: TCGAACTCCACCTATCATTCACCGCGATCTTAAATG...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATAATTTCTCGCACTTaGTCCACAAACGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKIISRT*STNDSL
Trigger: GAGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAATGTTGGTCCTGTATaGCTAAAGTTTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNVGPV*LKFGGA
Trigger: AGCACCTCCAAACTTTAGTCATACAGGACCAACATT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCAGTTGTACTGCTATaGGATGTCTTATCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPVVLL*DVLSSE
Trigger: CTCACTAGATAAGACATCTCATAGCAGTACAACTGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGTAGAAGCTATCACTaGTGGAATGACCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSRSYH*WNDQRM
Trigger: CATCCTTTGGTCATTCCATCAGTGATAGCTTCTACT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGTTGATGTTGATCTaGCTCAGGTTCTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLLMLI*LRFFRF
Trigger: GAACCTGAAGAACCTGAGGCAGATCAACATCAACAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGGGACTCCAGCAATaGTACTTAAGAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLGLQQ*YLRKEV
Trigger: TACCTCCTTTCTTAAGTAGCATTGCTGGAGTCCCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACGACCCACTTTGTTTaGTGTAGTTGTCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTTHFV*CSCHLK
Trigger: TTTCAGGTGACAACTACAGCAAACAAAGTGGGTCGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACATAAAAGGAGGAGATaGCACTGGTCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKHKRRR*HWSFFL
Trigger: AAGAAAGAAGGACCAGTGGCATCTCCTCCTTTTATG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAAGATTCAATTTCATaGTTCTGGCGACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKDSIS*FWRLCR
Trigger: CCTGCAGAGTCGCCAGAAGCATGAAATTGAATCTTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATATGAAACTGTCTGTTaGCTGCTCACTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYETVC*LLTRDS
Trigger: AGAATCTCGAGTGAGCAGCCAACAGACAGTTTCATA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTGCCTGTTCATGTTaGGAACCATATGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCACSC*EPYETV
Trigger: GACAGTTTCATATGGTTCCCAACATGAACAGGCACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGTTCAAACATAGGATaGACCTGTATCTCACATGAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGSNIG*TCISHD
Trigger: GTCATGTGAGATACAGGTCCATCCTATGTTTGAACC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATCACTGGAATATTCTaGGCTTCCTATTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKITGIF*ASYWPV
Trigger: AACTGGCCAATAGGAAGCCCAGAATATTCCAGTGAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGAAAGGAGGTACTACTaGAAATGTTGGTCCTGTATG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKERRYY*KCWSCM
Trigger: CATACAGGACCAACATTTCCAGTAGTACCTCCTTTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGCTTCTCTTTCTTTaGTATCACAGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRLLFL*YHSRKN
Trigger: GTTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATATGCCATTGACGTaGGTAAAAGGTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: CPILLQHPLLTIPETELSNMPLT*VKGWKY
Trigger: ATATTTCCAACCTTTTACCCACGTCAATGGCATATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATAGTTGGTACTGGCTaGGAAACTGGAAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKIVGTG*ETGSCF
Trigger: AAAACAGCTTCCAGTTTCCCAGCCAGTACCAACTAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAACAGAAGCCACGTTaGAAGAGGGAGCAATATTTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKQKPR*KREQYL
Trigger: CAAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTAATCTTAGATTCTaGAGGTGTCCTACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSNLRF*RCPTRK
Trigger: TTTCCTGGTAGGACACCTTCAGAATCTAAGATTAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAATTTCTGAGAACCTaGAAAGCCATAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQFLRT*KAIVIL
Trigger: AAGGATGACTATGGCTTTTCAGGTTCTCAGAAATTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTCAGACTGAATTACTaGTGTGGAAATGTCATTAGG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLRLNY*CGNVIR
Trigger: CCTAATGACATTTCCACATCAGTAATTCAGTCTGAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTGTAACCTCAGACTaGATTACTGATGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTVTSD*ITDVEM
Trigger: CATTTCCACATCAGTAATTCAGTCTGAGGTTACAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGTATTGTGATACTTaGAACTACGCTGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRYCDT*NYAGKY
Trigger: GTACTTTCCAGCGTAGTTTCAAGTATCACAATACCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGATGTAGTAGATATTaGGACAACTGCAGGTATTGT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGCSRY*DNCRYC
Trigger: ACAATACCTGCAGTTGTCTCAATATCTACTACATCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGTGTTCTTCTCAATTaGGCATCAAGATCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSVLLN*ASRSSR
Trigger: TCTAGAGGATCTTGATGCTCAATTGAGAAGAACACT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGCTGGATTCAAAATaGACAGACTTTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVLDSK*TDFASS
Trigger: AGAAGATGCAAAGTCTGTTCATTTTGAATCCAGCAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTTTCTTTGTGTCAGTaGTCTTGTCCTCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLSLCQ*SCPQFL
Trigger: CAAAAACTGAGGACAAGATCACTGACACAAAGAAAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGAATTACTAAGGCTTTaGCTTAGATTCTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKELLRL*LRFWLG
Trigger: TCCTAGCCAGAATCTAAGTCAAAGCCTTAGTAATTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTCATCTTCGATATCTaGCTCATTGTCGCTACTCAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFIFDI*LIVATH
Trigger: ATGAGTAGCGACAATGAGTCAGATATCGAAGATGAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGCAATGGATCACCTCCTaGGTTCAAGCTATGAATTTC +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKQWITS*VQAMNF
Trigger: GAAATTCATAGCTTGAACTCAGGAGGTGATCCATTG...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAATGCATGGTACATGTaGAACAAGAGGAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNAWYM*NKRKAI
Trigger: GATTGCTTTCCTCTTGTTGCACATGTACCATGCATT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTTGGAAGAAGGCATaGTTCAAAAGGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSWKKA*FKRSLM
Trigger: CATCAAAGACCTTTTGAACCATGCCTTCTTCCAAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGAAACGGTCAATTCTaGGGCATGGTAATTATGCTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRNGQF*GMVIML
Trigger: AAGCATAATTACCATGCCCCAGAATTGACCGTTTCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTTGTGAGGAATCACTaGAATATTCTGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKFVRNH*NILGFL
Trigger: TAGGAAGCCCAGAATATTCCAGTGATTCCTCACAAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATACTTGAAACTACGCTaGAAAGTACTGGTGATTCAG +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKYLKLR*KVLVIQ
Trigger: CTGAATCACCAGTACTTTCCAGCGTAGTTTCAAGTA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGATACTAGGTACTTaGGGTAATAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGILGT*GNKGVE
Trigger: TTCTACACCTTTATTACCCCAAGTACCTAGTATCCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAATTCCAGGAGCTTTaGGTTGTGTATCAGAATCTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQFQEL*VVYQNL
Trigger: TAGATTCTGATACACAACCCAAAGCTCCTGGAATTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACACTGTGATCATCTCTaGACTAAGTGTTCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKHCDHL*TKCSSQ
Trigger: TTGAGAAGAACACTTAGTCCAGAGATGATCACAGTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAATTTTCTCCATCTGTaGCTTTTCACTATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNFLHL*LFTIRF
Trigger: GAACCTGATAGTGAAAAGTCACAGATGGAGAAAATT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCAATCCAGTTGTACTaGTATGAGATGTCTTATCTA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPIQLY*YEMSYL
Trigger: TAGATAAGACATCTCATAGCAGTACAACTGGATTGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR GCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATAACACTGATTGGTTaGAGTTATTACTTACGGGGA +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKITLIG*SYYLRG
Trigger: TCCCCGTAAGTAATAACTGCAACCAATCAGTGTTAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACTGTAAACTTGAGATaGTTCAAACATAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTVNLR*FKHRMD
Trigger: GTCCATCCTATGTTTGAACCATCTCAAGTTTACAGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCACCTTGCCCAGTTTaGTATACAAAGATTCAATTT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAPCPV*YTKIQF
Trigger: AAATTGAATCTTTGTATACCAAACTGGGCAAGGTGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR TCA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGTATCACTTAAAACTCTaGCAGAGCCAGGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: NIENPISHKYNGSPPEFKYHLKL*QSQDSK
Trigger: TTTAGAATCCTGGCTCTGTCAGAGTTTTAAGTGATA...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CCA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAATATGCCATTGACGTaGGTAAAAGGTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNMPLT*VKGWKY
Trigger: ATATTTCCAACCTTTTACCCACGTCAATGGCATATT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
3UTR CAA 72 bp TTACAAGGAGGCATAGCACTGAATAACACTGATTGGTaGCAGTTATTACTTACGGGGAGTATTATTTATTTG +
Preference number: 4 (lower is better)
Translates to: LQGGIALNNTDW*QLLLTGSIIYL
Trigger: CAAATAAATAATACTCCCCGTAAGTAATAACTGCAACCAATCAGTGTTATTCAGTGCTATGCCTCCTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp CGAGCGGCGGCCGGGCGGGCGGTGGCAGCAGAGGCGCCGCAGTCATaGGGGGAGGGCCAGGGGCCGGCACCGAGTCGAGGCGGATGCGGC +
Preference number: 5 (lower is better)
Translates to: RAAAGRAVAAEAPQS*GEGQGPAPSRGGCG
Trigger: GCCGCATCCGCCTCGACTCGGTGCCGGCCCCTGGCCCTCCCCTCATGACTGCGGCGCCTCTGCTGCCACCGCCCGCCCGGCCGCCGCTCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp AGGCGGACCGCTGGGCCCAGCTGCGGCGGGGGCTGGCACCGAGGCTaGTGCGGCTCACGAGGAGGGCTCGAAGGCGGGCGATTCGGGAGC +
Preference number: 5 (lower is better)
Translates to: RRTAGPSCGGGWHRG*CGSRGGLEGGRFGS
Trigger: GCTCCCGAATCGCCCGCCTTCGAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCCCCCGCCGCAGCTGGGCCCAGCGGTCCGCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp CACCGACAAGCCGCAACGAGGGACAGGCGGACCGCTGGGCCCAGCTaGGGCGGGGGCTGGCACCGAGGCTGCTGCGGCTCACGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: HRQAATRDRRTAGPS*GGGWHRGCCGSRGG
Trigger: CCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCCCCCGCCGCAGCTGGGCCCAGCGGTCCGCCTGTCCCTCGTTGCGGCTTGTCGGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp GTGAACGAAAAGGGCGTGAAGGGCCGAGCCGCCCGCGCAGAGGTCTaGAGGGAACCGCGGCCGGGCGGGTTCGCGCCGACCCGGACGACG +
Preference number: 5 (lower is better)
Translates to: VNEKGVKGRAARAEV*REPRPGGFAPTRTT
Trigger: CGTCGTCCGGGTCGGCGCGAACCCGCCCGGCCGCGGTTCCCTGCAGACCTCTGCGCGGGCGGCTCGGCCCTTCACGCCCTTTTCGTTCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS TCA 90 bp TGCTGCGGCTCACGAGGAGGGCTCGAAGGCGGGCGATTCGGGAGCTaGGCCACGGGGGTTAGCGCCGCACGGTCCGCATCCATCCTGCGG +
Preference number: 5 (lower is better)
Translates to: CCGSRGGLEGGRFGS*ATGVSAARSASILR
Trigger: CCGCAGGATGGATGCGGACCGTGCGGCGCTAACCCCCGTGGCTCAGCTCCCGAATCGCCCGCCTTCGAGCCCTCCTCGTGAGCCGCAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp TCTTGGGGGCAGGAGCCGGCGGCGAGAGGAACAGGGAACCGGGAGTaGTGCTCTGCTTCTCTGCGGCGCCGCCAGACATGGTCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: SWGQEPAARGTGNRE*CSASLRRRQTWSVR
Trigger: GCGAACCGACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGTTCCTCTCGCCGCCGGCTCCTGCCCCCAAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp GCAGGAGCCGGCGGCGAGAGGAACAGGGAACCGGGAGTGCTGCTCTaGTTCTCTGCGGCGCCGCCAGACATGGTCGGTTCGCTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: AGAGGERNREPGVLL*FSAAPPDMVGSLER
Trigger: TCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGTTCCTCTCGCCGCCGGCTCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp GCAGTGGCATTGGAGTCACAGATGACGCTCCGGCGGAAGAAGCGGTaGTCAGTGGTGGTAGTGGTCGCGGCCGCCCCACGGCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AVALESQMTLRRKKR*SVVVVVAAAPRLSL
Trigger: CAAGGACAGCCGTGGGGCGGCCGCGACCACTACCACCACTGAGCACCGCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAATGCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp CAAGGAGGCAGTTCCCACAGGTTGGAACTGGCCAAGTGGCTGTGGTaGTGGGCCACCCGTCCCACTCCATTGAGCGCCAAATGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: QGGSSHRLELAKWLW*WATRPTPLSAKWGS
Trigger: GCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp TCAGCAGGGGTTGGAAGTGGTGAGTTTGGGCTTCCAGGAAGGAGGTaGTCTTACGCCGCTGGGAAATGGCTACTTTCGGTGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SAGVGSGEFGLPGRR*SYAAGKWLLSVGRW
Trigger: CCACCTGCCCACCGAAAGTAGCCATTTCCCAGCGGCGTAAGAGCACCTCCTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGAGCTGGAGCCATTCTaGGGGGCAGGAGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDELEPF*GAGAGG
Trigger: GCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 90 bp GTCTACAGAGGAAGCCAAAGTGGTCGGCTGGGTAGCTTGGGTCTGTaGTACTGCAACTGGCTCTGCAGGAGCAACCTGAGAGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: VYRGSQSGRLGSLGL*YCNWLCRSNLRDSL
Trigger: CAGGGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACTTTGGCTTCCTCTGTAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542543.1
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp GGTTGCTGGGACTGGGTTAGAGAAGGTCCTGGAAAAGGTGGCAGCTaGTCGCTGGGTAGAGTACCTGCTGGAAGTTCAGTACCCACTGGC +
Preference number: 5 (lower is better)
Translates to: GCWDWVREGPGKGGS*SLGRVPAGSSVPTG
Trigger: GCCAGTGGGTACTGAACTTCCAGCAGGTACTCTACCCAGCGAGCAGCTGCCACCTTTTCCAGGACCTTCTCTAACCCAGTCCCAGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp GGAAGAAGACTTTGGCCAACAGTCCTCAGCAGGGGTTGGAAGTGGTaGGTTTGGGCTTCCAGGAAGGAGGTGCTCTTACGCCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GRRLWPTVLSRGWKW*VWASRKEVLLRRWE
Trigger: TTCCCAGCGGCGTAAGAGCACCTCCTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCTGCTGAGGACTGTTGGCCAAAGTCTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS TCA 90 bp TCATCTGTGAATGTGCCCTTCCTGCTGGACGTCATGGCAGGAGGCTaGGCTTGGGCGGCTTGGCTGTTCACTGTTGCCCCAACAGTGTTT +
Preference number: 5 (lower is better)
Translates to: SSVNVPFLLDVMAGG*AWAAWLFTVAPTVF
Trigger: AAACACTGTTGGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAGCCTCCTGCCATGACGTCCAGCAGGAAGGGCACATTCACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000544559.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp AGTGGTCGGCTGGGTAGCTTGGGTCTGTGCTACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGACTCCCTGAGTACTCTGTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SGRLGSLGLCYCNWL*RSNLRDSLSTLFSS
Trigger: GCTGGAAAACAGAGTACTCAGGGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340908.9
ENST00000535572.5
ENST00000542543.1
ENST00000676347.1
CDS GCA 90 bp AGAGGAAGCCAAAGTGGTCGGCTGGGTAGCTTGGGTCTGTGCTACTaGAACTGGCTCTGCAGGAGCAACCTGAGAGACTCCCTGAGTACT +
Preference number: 5 (lower is better)
Translates to: RGSQSGRLGSLGLCY*NWLCRSNLRDSLST
Trigger: AGTACTCAGGGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACTTTGGCTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542543.1
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp AGTGGTCGGCTGGGTAGCTTGGGTCTGTGCTACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGACTCCCTGAGTACTCTCCAAAACTGC +
Preference number: 5 (lower is better)
Translates to: SGRLGSLGLCYCNWL*RSNLRDSLSTLQNC
Trigger: GCAGTTTTGGAGAGTACTCAGGGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS TCA 90 bp GTACTGACAAAGAGGGAAGGCAGGCTGGAGCGTCGGTGCTTGCGCTaGGAGGCAGAGTGCATAGGCAGGACACTCTCCAATGCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: VLTKREGRLERRCLR*EAECIGRTLSNALE
Trigger: TTCTAAAGCATTGGAGAGTGTCCTGCCTATGCACTCTGCCTCTCAGCGCAAGCACCGACGCTCCAGCCTGCCTTCCCTCTTTGTCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS TCA 90 bp CCAGAGTGGACTGGAACAACCGAGGGTTGTGTCGCAACTGGGATCTaGGGTTCGCCTTGGATAGTTGGTACTGGCTGGGAAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: PEWTGTTEGCVATGI*GSPWIVGTGWETGS
Trigger: GCTTCCAGTTTCCCAGCCAGTACCAACTATCCAAGGCGAACCTCAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCAGTCCACTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS GCA 90 bp AGAGCCACCCAGGTTCGAGGTCATGGAGATGCACAGTTGCCCAGGTaGAGAGAACTTCCTTGCCATTCCAGGGCCCTCGTAATTCATGTG +
Preference number: 5 (lower is better)
Translates to: RATQVRGHGDAQLPR*RELPCHSRALVIHV
Trigger: CACATGAATTACGAGGGCCCTGGAATGGCAAGGAAGTTCTCTGCACCTGGGCAACTGTGCATCTCCATGACCTCGAACCTGGGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAGCTGGAGCCATTCTaGGGGGCAGGAGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLELEPF*GAGAGG
Trigger: GCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGAGCTTGGGCGGCTaGGCTGTTCACTGTTGCCCC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSLGG*AVHCCP
Trigger: GGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp TGGCATCTCGGGCCCAATTGTCTACCAACTTGTGCAAGTCATCTGTaGATGTGCCCTTCCTGCTGGACGTCATGGCAGGAGGCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: WHLGPNCLPTCASHL*MCPSCWTSWQEAEL
Trigger: AAGCTCAGCCTCCTGCCATGACGTCCAGCAGGAAGGGCACATTCACAGATGACTTGCACAAGTTGGTAGACAATTGGGCCCGAGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp GACTTGAGAAACACCCTTCTGAGGCTGTGTTCCTGCTTCTGTGATTaGTGTTGGAGCCGCCATGGACACAGGACCAACCGCAGAAGTCAC +
Preference number: 5 (lower is better)
Translates to: DLRNTLLRLCSCFCD*CWSRHGHRTNRRSH
Trigger: GTGACTTCTGCGGTTGGTCCTGTGTCCATGGCGGCTCCAACAGCAATCACAGAAGCAGGAACACAGCCTCAGAAGGGTGTTTCTCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGCTGGAGCCATTCTaGGGGGCAGGAGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSELEPF*GAGAGG
Trigger: GCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGACACTGGGCGGTCTTaGCTGGTACTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDDTGRS*LVLLGT
Trigger: TGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGCGGCGGCTCCTCTTaGCTCCCCACAAGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGGGSS*LPTRLG
Trigger: GCCTAGCCTTGTGGGGAGCAAAGAGGAGCCGCCGCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAAGCCCGCTTCAGGGTaGCCAGACCGAGGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDKPASG*PDRGLQ
Trigger: TTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCTT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGTCGGCTGGGTAGCTaGGGTCTGTGCTACTGCAAC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGRLGS*GLCYCN
Trigger: GTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACCCGTCCCACTCCATaGAGCGCCAAATGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTRPTP*SAKWGS
Trigger: GCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGCAGTTCCCACAGGTaGGAACTGGCCAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGSSHR*ELAKWL
Trigger: CAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp TCCAGGGCCCTCGTAATTCATGTGCCCTTTGCTTCCTCTCCTGCCTaGGAGATTCATGGCATCTCGGGCCCAATTGTCTACCAACTTGTG +
Preference number: 5 (lower is better)
Translates to: SRALVIHVPFASSPA*EIHGISGPIVYQLV
Trigger: CACAAGTTGGTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATTACGAGGGCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp GGGATCGCAGCTGTTGTAGCAGATGAAGCCAACGTGAGCAGAGGCTaGGTAATGCCAGCTGCCATTGTGATGGGAAGGGATGAGAAACCT +
Preference number: 5 (lower is better)
Translates to: GIAAVVADEANVSRG*VMPAAIVMGRDEKP
Trigger: AGGTTTCTCATCCCTTCCCATCACAATGGCAGCTGGCATTACTCAGCCTCTGCTCACGTTGGCTTCATCTGCTACAACAGCTGCGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS GCA 90 bp CCATTCCAGGGCCCTCGTAATTCATGTGCCCTTTGCTTCCTCTCCTaGCTGAGAGATTCATGGCATCTCGGGCCCAATTGTCTACCAACT +
Preference number: 5 (lower is better)
Translates to: PFQGPRNSCALCFLS*LRDSWHLGPNCLPT
Trigger: AGTTGGTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATTACGAGGGCCCTGGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCCACGGCTGTCCTaGTCCATAGTGTGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSAPRLS*SIVWRR
Trigger: CCGCCGCCACACTATGGACAAGGACAGCCGTGGGGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCGGCGGCTCCTCTTaGCTCCCCACAAGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSGGGSS*LPTRLG
Trigger: GCCTAGCCTTGTGGGGAGCAAAGAGGAGCCGCCGCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTCCTCAGCAGGGGTaGGAAGTGGTGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSPQQG*EVVSLG
Trigger: GCCCAAACTCACCACTTCCAACCCCTGCTGAGGACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCCTGTTAAGCTACTaGAGGATGGCTGACCCTGGC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPLLSY*RMADPG
Trigger: GCCAGGGTCAGCCATCCTCAAGTAGCTTAACAGGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTGGGTGAACCTGACTaGGCAGCTGAGTCACAGGCT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVGEPD*AAESQA
Trigger: AGCCTGTGACTCAGCTGCCAAGTCAGGTTCACCCAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCTGGCTGGGACACTaGAACCTGTCCTCCTACACC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSWLGH*NLSSYT
Trigger: GGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp AGAATGGATGCAAACAGAAGCCACGTTGGAAGAGGGAGCAATATTTaGATCTCCTGGGTACTGTGGTGGCAGTCGAGGTGGGAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RMDANRSHVGRGSNI*ISWVLWWQSRWEAL
Trigger: CAGGGCTTCCCACCTCGACTGCCACCACAGTACCCAGGAGATTCAAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTGCATCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000537687.5
ENST00000545285.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS GCA 90 bp GAAGTGGTAGAAGCAGTAGGTATGCCGGTGCTAGCAGAAGGGAGCTaGTTGATTCCTGTCTGGGAAGCACTGGATTGTTCTACCTGCTGT +
Preference number: 5 (lower is better)
Translates to: EVVEAVGMPVLAEGS*LIPVWEALDCSTCC
Trigger: ACAGCAGGTAGAACAATCCAGTGCTTCCCAGACAGGAATCAAGCAGCTCCCTTCTGCTAGCACCGGCATACCTACTGCTTCTACCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp CCTGAGAGATTCATGGCATCTCGGGCCCAATTGTCTACCAACTTGTaGAAGTCATCTGTGAATGTGCCCTTCCTGCTGGACGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: PERFMASRAQLSTNL*KSSVNVPFLLDVMA
Trigger: TGCCATGACGTCCAGCAGGAAGGGCACATTCACAGATGACTTGCACAAGTTGGTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp TTTGACTTGAGAAACCTTCTGAGGCTGTGTTCCTGCTTCTGTGATTaGTGTTGGAGCCGCCATGGACACAGGACCAACCGCAGAAGTCAC +
Preference number: 5 (lower is better)
Translates to: FDLRNLLRLCSCFCD*CWSRHGHRTNRRSH
Trigger: GTGACTTCTGCGGTTGGTCCTGTGTCCATGGCGGCTCCAACAGCAATCACAGAAGCAGGAACACAGCCTCAGAAGGTTTCTCAAGTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535572.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCAGTGCAGTGGCATaGGAGTCACAGATGACGCTC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSSAVA*ESQMTL
Trigger: GAGCGTCATCTGTGACTCCAATGCCACTGCACTGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGACATTCCCACGGCCTaGGTCTCCAGCTCTTCGATA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDDIPTA*VSSSSI
Trigger: TATCGAAGAGCTGGAGACCAAGGCCGTGGGAATGTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCACGACGAGGCACACTaGAGGGTGGATATACCCCAT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHDEAH*RVDIPH
Trigger: ATGGGGTATATCCACCCTCAAGTGTGCCTCGTCGTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATATACTGCACTGTCTGTaGAGGAGGGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDILHCL*RRGCLL
Trigger: CAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTAT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAAGACTTGTGGAGCTaGAGGCTGACTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQDLWS*RLTHWL
Trigger: CAGCCAGTGAGTCAGCCTCAAGCTCCACAAGTCTTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTGCTGCTGGTTCCTaGACCTGGAGCAGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCAAGS*TWSRKA
Trigger: AGCCTTTCTGCTCCAGGTCAAGGAACCAGCAGCACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGAGCTTGGGCGGCTaGGCTGTTCACTGTTGCCCC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLSLGG*AVHCCP
Trigger: GGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCAGGGGTGGAAGCCCTaGCCCTTTTCCTTTCTACCT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDQGWKP*PFSFLP
Trigger: AGGTAGAAAGGAAAAGGGCAAGGGCTTCCACCCCTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS GCA 90 bp CCAGGTTTCACTCCTGATGTAGTAGTGCTGACTGGGGTAGAAACTTaGCCAGGTGTGACCACTGGTGTAACTGGCAAAGCAACTGTTCCT +
Preference number: 5 (lower is better)
Translates to: PGFTPDVVVLTGVET*PGVTTGVTGKATVP
Trigger: AGGAACAGTTGCTTTGCCAGTTACACCAGTGGTCACACCTGGGCAAGTTTCTACCCCAGTCAGCACTACTACATCAGGAGTGAAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp TGTGGGCACTCTCTGGCACATCTGAAGAGATACCAGGGATGGTTATaGCATTCGGCTCTGGTTTCACCAAGGTACTCTCTGGACTACTAC +
Preference number: 5 (lower is better)
Translates to: CGHSLAHLKRYQGWL*HSALVSPRYSLDYY
Trigger: GTAGTAGTCCAGAGAGTACCTTGGTGAAACCAGAGCCGAATGGCATAACCATCCCTGGTATCTCTTCAGATGTGCCAGAGAGTGCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp AAATCGGGTCCTCCTGCCACCAGGTTTGAATGTCACCTGTTCAGATaGACAGTTAAACTTCGCACAGCCTTGACCTGGAGCAGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: KSGPPATRFECHLFR*TVKLRTALTWSRKA
Trigger: AGCCTTTCTGCTCCAGGTCAAGGCTGTGCGAAGTTTAACTGTGCATCTGAACAGGTGACATTCAAACCTGGTGGCAGGAGGACCCGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS GCA 90 bp TCTCTGCGGCAAAAGAGAGACTTACCTCGTAATTCATGTGCCCTTTaGTTCCTCTCCTGCCTGAGAGATTCATGGCATCTCGGGCCCAAT +
Preference number: 5 (lower is better)
Translates to: SLRQKRDLPRNSCAL*FLSCLRDSWHLGPN
Trigger: ATTGGGCCCGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATTACGAGGTAAGTCTCTCTTTTGCCGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537603.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGACACTGGGCGGTCTTaGCTGGTACTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLDTGRS*LVLLGT
Trigger: TGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTACAGCAGGCACATaGGCAACAGGCTGTACCAAG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCTAGT*ATGCTK
Trigger: CTTGGTACAGCCTGTTGCCAATGTGCCTGCTGTACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTGAGGCAGTAGTTTaGTGGGCACTCTCTGGCACA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSEAVV*WALSGT
Trigger: TGTGCCAGAGAGTGCCCACAAAACTACTGCCTCAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACAGCAGGGGGCACCTaGCCCAGTTTGGTATACAAA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTAGGT*PSLVYK
Trigger: TTTGTATACCAAACTGGGCAAGGTGCCCCCTGCTGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGCCCCAACAGTGTTaGTGCTGCTGGTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLPQQC*CCWFLD
Trigger: GTCAAGGAACCAGCAGCACAAACACTGTTGGGGCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTTGGCTGTTCACTGTaGCCCCAACAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLGCSL*PQQCLC
Trigger: GCACAAACACTGTTGGGGCAACAGTGAACAGCCAAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGAGCTTGGGCGGCTaGGCTGTTCACTGTTGCCCC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLSLGG*AVHCCP
Trigger: GGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCATGGAGATGCACAGTaGCCCAGGTGCAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHGDAQ*PRCREL
Trigger: AAGTTCTCTGCACCTGGGCAACTGTGCATCTCCATG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACCCGTCCCACTCCATaGAGCGCCAAATGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTRPTP*SAKWGS
Trigger: GCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGCAGTTCCCACAGGTaGGAACTGGCCAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGSSHR*ELAKWL
Trigger: CAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATACTCTCCAAAACTGCTaGCTGGGAGGATGTAGTGGG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDTLQNC*LGGCSG
Trigger: CCCACTACATCCTCCCAGCAAGCAGTTTTGGAGAGT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp GTCTGTTGGCTGCTCACTCGAGATTCTGTGAAGACAGAGGATCCCTaGCCACTGTCAACCGTCCCATCAGATAACACAGATATACTGGGT +
Preference number: 5 (lower is better)
Translates to: VCWLLTRDSVKTEDP*PLSTVPSDNTDILG
Trigger: ACCCAGTATATCTGTGTTATCTGATGGGACGGTTGACAGTGGTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGAGCAGCCAACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp GGGAACCATATGAAACTGTCTGTTGGCTGCTCACTCGAGATTCTGTaGAGACAGAGGATCCCTGACCACTGTCAACCGTCCCATCAGATA +
Preference number: 5 (lower is better)
Translates to: GNHMKLSVGCSLEIL*RQRIPDHCQPSHQI
Trigger: TATCTGATGGGACGGTTGACAGTGGTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGAGCAGCCAACAGACAGTTTCATATGGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp AGCAATCCCCTCTTCAGTGGGCACTGTAACCTCAGACTGAATTACTaGTGTGGAAATGTCATTAGGAGGGCTGCTTGTTGCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: SNPLFSGHCNLRLNY*CGNVIRRAACCRDW
Trigger: CCAGTCCCTGCAACAAGCAGCCCTCCTAATGACATTTCCACATCAGTAATTCAGTCTGAGGTTACAGTGCCCACTGAAGAGGGGATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp GATGTAGTGGGGGCTTGTGCTAAACTCCCTCCTGGCTGGGACACTTaGACCTGTCCTCCTACACCACCCATAGGAACTAAAAGATTTGAT +
Preference number: 5 (lower is better)
Translates to: DVVGACAKLPPGWDT*TCPPTPPIGTKRFD
Trigger: ATCAAATCTTTTAGTTCCTATGGGTGGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGGAGGGAGTTTAGCACAAGCCCCCACTACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS TCA 90 bp GAGACTTACCTCGTAATTCATGTGCCCTTTGCTTCCTCTCCTGCCTaGGAGATTCATGGCATCTCGGGCCCAATTGTCTACCAACTTGTG +
Preference number: 5 (lower is better)
Translates to: ETYLVIHVPFASSPA*EIHGISGPIVYQLV
Trigger: CACAAGTTGGTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATTACGAGGTAAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537603.1
CDS-3UTR CAA 90 bp AATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGGAGCTGGAGCCATTCTaGGGGGCAGGAGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: NIENPISHKYNGSPPEFKELEPF*GAGAGG
Trigger: GCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTC...CTTGAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACACTGGGCGGTCTTaGCTGGTACTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSDTGRS*LVLLGT
Trigger: TGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGCGGCGGCTCCTCTTaGCTCCCCACAAGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGGGSS*LPTRLG
Trigger: GCCTAGCCTTGTGGGGAGCAAAGAGGAGCCGCCGCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAGCCCGCTTCAGGGTaGCCAGACCGAGGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSKPASG*PDRGLQ
Trigger: TTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGTTCTACCTGCTGTTaGAGACTGCTCTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDCSTCC*RLLSSC
Trigger: GCAGGAAGAGAGCAGTCTCAAACAGCAGGTAGAACA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGGGAAGCACTGGATaGTTCTACCTGCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLGSTG*FYLLFE
Trigger: CTCAAACAGCAGGTAGAACAATCCAGTGCTTCCCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGGCTGAGACTGTGCTaGGACAGTAGAAGGTATATG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGLRLC*DSRRYM
Trigger: CATATACCTTCTACTGTCCAAGCACAGTCTCAGCCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCCTGTTAAGCTACTaGAGGATGGCTGACCCTGGC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPLLSY*RMADPG
Trigger: GCCAGGGTCAGCCATCCTCAAGTAGCTTAACAGGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTCGGCTGGGTAGCTaGGGTCTGTGCTACTGCAAC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSGRLGS*GLCYCN
Trigger: GTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGGTCCTTCTGTCATTaGGGCACGTCTAAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGSFCH*GTSKFR
Trigger: TCTGAACTTAGACGTGCCCAAATGACAGAAGGACCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGCTGCTGCTGTGGTaGGGACTCCAGCAATGCTAC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWLLLW*GLQQCY
Trigger: GTAGCATTGCTGGAGTCCCAACCACAGCAGCAGCCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGTAGGTCCTGCTGCTaGGGGAAGAATAGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSRSCC*GKNRSR
Trigger: TCTACTCCTATTCTTCCCCAAGCAGCAGGACCTACT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGCCTTCTTTGACTaGAGAAACACCCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRAFFD*RNTLLR
Trigger: CCTCAGAAGGGTGTTTCTCAAGTCAAAGAAGGCCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACCCGTCCCACTCCATaGAGCGCCAAATGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSTRPTP*SAKWGS
Trigger: GCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCAGTTCCCACAGGTaGGAACTGGCCAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSGSSHR*ELAKWL
Trigger: CAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCCAGTAGGTGGTTTTaGTCCTGTGGTTCGGATTCT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPSRWF*SCGSDS
Trigger: AGAATCCGAACCACAGGACAAAAACCACCTACTGGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGGGGTCTGGTAAGTaGATGCTAATGGCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLGSGK*MLMAEA
Trigger: TGCTTCTGCCATTAGCATCAACTTACCAGACCCCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGGCCTTCTTTGACTaGAGAAACCTTCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRAFFD*RNLLRL
Trigger: CAGCCTCAGAAGGTTTCTCAAGTCAAAGAAGGCCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535572.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTGCCCCAACAGTGTTaGTGCTGCTGGTTCTACAGA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLPQQC*CCWFYR
Trigger: TCTGTAGAACCAGCAGCACAAACACTGTTGGGGCAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS GCA 90 bp AAGAGAGACTTACCTCGTAATTCATGTGCCCTTTGCTTCCTCTCCTaGCTGAGAGATTCATGGCATCTCGGGCCCAATTGTCTACCAACT +
Preference number: 5 (lower is better)
Translates to: KRDLPRNSCALCFLS*LRDSWHLGPNCLPT
Trigger: AGTTGGTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATTACGAGGTAAGTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537603.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCAGTGCAGTGGCATaGGAGTCACAGATGACGCTC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSSAVA*ESQMTL
Trigger: GAGCGTCATCTGTGACTCCAATGCCACTGCACTGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTGGCGGCGGCTCCTCTTaGCTCCCCACAAGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: PRSTNIENPISHKYNGSPGGGSS*LPTRLG
Trigger: GCCTAGCCTTGTGGGGAGCAAAGAGGAGCCGCCGCC...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGGAGGCAGTTCTTCTaGATTCAAGTCCACTGCAAC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRRQFF*IQVHCN
Trigger: GTTGCAGTGGACTTGAATCAAGAAGAACTGCCTCCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGAGATGTGGTTCCTaGGGGGAAACAGAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLRCGS*GETEEK
Trigger: CTTTTCTTCTGTTTCCCCCAAGGAACCACATCTCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCCCTGTTAAGCTACTaGAGGATGGCTGACCCTGGC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSPLLSY*RMADPG
Trigger: GCCAGGGTCAGCCATCCTCAAGTAGCTTAACAGGGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATACTGCACTGTCTGTaGAGGAGGGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLILHCL*RRGCLL
Trigger: CAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTAT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTGGCCTCACTGGAGGTaGATGTCTGTGAAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDWPHWR*MSVKVN
Trigger: ATTCACTTTCACAGACATCAACCTCCAGTGAGGCCA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAAGACTTGTGGAGCTaGAGGCTGACTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQDLWS*RLTHWL
Trigger: CAGCCAGTGAGTCAGCCTCAAGCTCCACAAGTCTTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGCTGCTGCTGTGGTaGGGACTCCAGCAATGCTAC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSWLLLW*GLQQCY
Trigger: GTAGCATTGCTGGAGTCCCAACCACAGCAGCAGCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTCTGGACTACTACTaGATAGCACTGAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSLDYY*IALRTL
Trigger: CAGAGTCCTCAGTGCTATCAAGTAGTAGTCCAGAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGAGAAACGACCCACTTaGTTTGCTGTAGTTGTCACC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDEKRPT*FAVVVT
Trigger: GGTGACAACTACAGCAAACAAAGTGGGTCGTTTCTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTAGATTTGCTGCCTTaGCTTTTAGTGGGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLDLLP*LLVGRR
Trigger: ACGACGACCCACTAAAAGCAAAGGCAGCAAATCTAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTGCTGCTGGTTCCTaGACCTGGAGCAGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCAAGS*TWSRKA
Trigger: AGCCTTTCTGCTCCAGGTCAAGGAACCAGCAGCACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCACATGCCCTTTATaGATCTGGGGTCTGGTAAGT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSTCPL*IWGLVS
Trigger: ACTTACCAGACCCCAGATCAATAAAGGGCATGTGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGCCAGGCATCACGTTaGTTTCCTCATTCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGQASR*FPHSLV
Trigger: GACTAAAGAATGAGGAAACAAACGTGATGCCTGGCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCCAGAATATGCCATaGACGTGGGTAAAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSQNMP*TWVKGW
Trigger: CCAACCTTTTACCCACGTCAATGGCATATTCTGGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGGGGTGGAAGCCCTaGCCCTTTTCCTTTCTACCT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQGWKP*PFSFLP
Trigger: AGGTAGAAAGGAAAAGGGCAAGGGCTTCCACCCCTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCTGGCTGGGACACTaGAACCTGTCCTCCTACACC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSWLGH*NLSSYT
Trigger: GGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp TGGGACTGTGCCTGTAGAATGTGCCTGTTCATGTTGGGAACCATATaGAACTGTCTGTTGGCTGCTCACTCGAGATTCTGTGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: WDCACRMCLFMLGTI*NCLLAAHSRFCEDR
Trigger: TCTGTCTTCACAGAATCTCGAGTGAGCAGCCAACAGACAGTTTCATATGGTTCCCAACATGAACAGGCACATTCTACAGGCACAGTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp GAGAGGGGAGATCCCGGACCCAATCCAGAATCTAATCTTAGATTCTaGAGGTGTCCTACCAGGAAAGCCTGTCCAGATGGAAATTCAAAG +
Preference number: 5 (lower is better)
Translates to: ERGDPGPNPESNLRF*RCPTRKACPDGNSK
Trigger: CTTTGAATTTCCATCTGGACAGGCTTTCCTGGTAGGACACCTTCAGAATCTAAGATTAGATTCTGGATTGGGTCCGGGATCTCCCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS TCA 90 bp ACCACGGTTTCAGCTAAAGTAGGAGTAGAAGTACTGCTGCTAAGCTaGATGCACAGCTGTGAAGCTGTGCTTGGGAATGAAGTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: TTVSAKVGVEVLLLS*MHSCEAVLGNEVVV
Trigger: TACCACCACTTCATTCCCAAGCACAGCTTCACAGCTGTGCATTCAGCTTAGCAGCAGTACTTCTACTCCTACTTTAGCTGAAACCGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp AGTAGGTCCTGCTGCTTGGGGAAGAATAGGAGTAGAAGCTATCACTaGTGGAATGACCAAAGGATGCAGCCCACCAGGCTGAGAAATATA +
Preference number: 5 (lower is better)
Translates to: SRSCCLGKNRSRSYH*WNDQRMQPTRLRNI
Trigger: TATATTTCTCAGCCTGGTGGGCTGCATCCTTTGGTCATTCCATCAGTGATAGCTTCTACTCCTATTCTTCCCCAAGCAGCAGGACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp CCAGTGAGACAGAGGCATGCTGAGCTCCAGATGAGCTGTGTTCACTaGACAGAGACCGCAGCTTTTCTTCTAGAGTCTTTATGTCATCAA +
Preference number: 5 (lower is better)
Translates to: PVRQRHAELQMSCVH*TETAAFLLESLCHQ
Trigger: TTGATGACATAAAGACTCTAGAAGAAAAGCTGCGGTCTCTGTTCAGTGAACACAGCTCATCTGGAGCTCAGCATGCCTCTGTCTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 90 bp TTTGATACAGAGAAACGACCCACTTTGTTTGCTGTAGTTGTCACCTaGAAACGTCCAACCTTGGTAGGCTGCCCAGTGTCTGACTTTGCC +
Preference number: 5 (lower is better)
Translates to: FDTEKRPTLFAVVVT*KRPTLVGCPVSDFA
Trigger: GGCAAAGTCAGACACTGGGCAGCCTACCAAGGTTGGACGTTTTCAGGTGACAACTACAGCAAACAAAGTGGGTCGTTTCTCTGTATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACATTCCCACGGCCTaGGTCTCCAGCTCTTCGATA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSDIPTA*VSSSSI
Trigger: TATCGAAGAGCTGGAGACCAAGGCCGTGGGAATGTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCGGTGATAAAGATGTaGTCACATTTAAGATCGCGG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPVIKM*SHLRSR
Trigger: CCGCGATCTTAAATGTGACAACATCTTTATCACCGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCAGGAATTGCTACTTaGTCAAAACTGGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSGIAT*SKLAGF
Trigger: GAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGACAGTACTGATGAGTaGTATGGAATGCCCTCATAC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDDSTDE*YGMPSY
Trigger: GTATGAGGGCATTCCATACAACTCATCAGTACTGTC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAAGACTTGTGGAGCTaGAGGCTGACTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSQDLWS*RLTHWL
Trigger: CAGCCAGTGAGTCAGCCTCAAGCTCCACAAGTCTTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGACGCAGGAATTGGTaGTTTGAACTCTCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRRRNW*FELSFQ
Trigger: TTGGAAGGAGAGTTCAAACAACCAATTCCTGCGTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTAGGAATGCCTATTaGCTGTGGCATGGAAGACGC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGRNAY*LWHGRR
Trigger: GCGTCTTCCATGCCACAGCAAATAGGCATTCCTACC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTACAGCAGGCACATaGGCAACAGGCTGTACCAAG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCTAGT*ATGCTK
Trigger: CTTGGTACAGCCTGTTGCCAATGTGCCTGCTGTACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCCAGGAGCTTTGGGTaGTGTATCAGAATCTACTTC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSRSFG*CIRIYF
Trigger: GAAGTAGATTCTGATACACAACCCAAAGCTCCTGGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTGAGGCAGTAGTTTaGTGGGCACTCTCTGGCACA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSEAVV*WALSGT
Trigger: TGTGCCAGAGAGTGCCCACAAAACTACTGCCTCAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACAGCAGGGGGCACCTaGCCCAGTTTGGTATACAAA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTAGGT*PSLVYK
Trigger: TTTGTATACCAAACTGGGCAAGGTGCCCCCTGCTGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTGCTTCGACTAGATTaGCTGCCTTTGCTTTTAGTG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLLRLD*LPLLLV
Trigger: CACTAAAAGCAAAGGCAGCAAATCTAGTCGAAGCAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGAGCTTGGGCGGCTaGGCTGTTCACTGTTGCCCC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLSLGG*AVHCCP
Trigger: GGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCATCTCGGGCCCAATaGTCTACCAACTTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLASRAQ*STNLCK
Trigger: CTTGCACAAGTTGGTAGACAATTGGGCCCGAGATGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGGGGTGGAAGCCCTaGCCCTTTTCCTTTCTACCT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSQGWKP*PFSFLP
Trigger: AGGTAGAAAGGAAAAGGGCAAGGGCTTCCACCCCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGAACAACCGAGGGTaGTGTCGCAACTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSWNNRG*CRNWDL
Trigger: CAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGACTCTCCAAAACTGCTaGCTGGGAGGATGTAGTGGG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLTLQNC*LGGCSG
Trigger: CCCACTACATCCTCCCAGCAAGCAGTTTTGGAGAGT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp GAAGATGGTGCAGAGAGGGAGAAAGCCAATCCAGTTGTACTGCTATaGGATGTCTTATCTAGTGAGTGTGCGCTAACTACCACGGTTTCA +
Preference number: 5 (lower is better)
Translates to: EDGAEREKANPVVLL*DVLSSECALTTTVS
Trigger: TGAAACCGTGGTAGTTAGCGCACACTCACTAGATAAGACATCTCATAGCAGTACAACTGGATTGGCTTTCTCCCTCTCTGCACCATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGACACTGGGCGGTCTTaGCTGGTACTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDTGRS*LVLLGT
Trigger: TGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTGCCTCTCAGACTTaGTTAATTTTCGATCCTGCA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSASQT*LIFDPA
Trigger: TGCAGGATCGAAAATTAACAAAGTCTGAGAGGCAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAGCCCGCTTCAGGGTaGCCAGACCGAGGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKPASG*PDRGLQ
Trigger: TTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGTACCTATCACACTCTaGGCAAAAGAAGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLVPITL*AKEARF
Trigger: GAAGCGGGCTTCTTTTGCCAAGAGTGTGATAGGTAC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCCTTCACTTCAGGAATaGCTACTTTGTCAAAACTGG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDPSLQE*LLCQNW
Trigger: CCAGTTTTGACAAAGTAGCAATTCCTGAAGTGAAGG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGTTCTACCTGCTGTTaGAGACTGCTCTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLCSTCC*RLLSSC
Trigger: GCAGGAAGAGAGCAGTCTCAAACAGCAGGTAGAACA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGGGAAGCACTGGATaGTTCTACCTGCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLGSTG*FYLLFE
Trigger: CTCAAACAGCAGGTAGAACAATCCAGTGCTTCCCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGGCTGAGACTGTGCTaGGACAGTAGAAGGTATATG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGLRLC*DSRRYM
Trigger: CATATACCTTCTACTGTCCAAGCACAGTCTCAGCCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGTGGAAGAAGACTTaGGCCAACAGTCCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSRWKKT*ANSPQQ
Trigger: CTGCTGAGGACTGTTGGCCAAAGTCTTCTTCCACCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGTCGGCTGGGTAGCTaGGGTCTGTGCTACTGCAAC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGRLGS*GLCYCN
Trigger: GTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCTATCTCCTCGGGGTaGTCACCATCTAGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAISSG*SPSRSN
Trigger: ATTTGACCTAGATGGTGACAACCCCGAGGAGATAGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGCAGGAATTGGTTGTTaGAACTCTCCTTCCAATTTC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDAGIGC*NSPSNF
Trigger: GAAATTGGAAGGAGAGTTCAAACAACCAATTCCTGC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCACTGGGGAAAACTTTaGATTCTCGTAATCGGCTTT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDHWGKL*ILVIGF
Trigger: AAAGCCGATTACGAGAATCAAAAGTTTTCCCCAGTG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGGTCCTTCTGTCATTaGGGCACGTCTAAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLGSFCH*GTSKFR
Trigger: TCTGAACTTAGACGTGCCCAAATGACAGAAGGACCC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGAAAGCCAATCCAGTaGTACTGCTATGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDRKPIQ*YCYEMS
Trigger: AGACATCTCATAGCAGTACAACTGGATTGGCTTTCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGTAGGTCCTGCTGCTaGGGGAAGAATAGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSRSCC*GKNRSR
Trigger: TCTACTCCTATTCTTCCCCAAGCAGCAGGACCTACT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATCTAGTGGTAAATTGGTaGGTGGTAAGCAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLVVNW*VVSKYL
Trigger: CAAGTACTTGCTTACCACCAACCAATTTACCACTAG...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGTTCCTAGTGGTAAATaGGTTGGTGGTAAGCAAGTA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDVPSGK*VGGKQV
Trigger: TACTTGCTTACCACCAACCAATTTACCACTAGGAAC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGGGCCTTCTTTGACTaGAGAAACACCCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRAFFD*RNTLLR
Trigger: CCTCAGAAGGGTGTTTCTCAAGTCAAAGAAGGCCCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTGAGGCAGTAGTTTaGTGGGCACTCTCTGGCACA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSEAVV*WALSGT
Trigger: TGTGCCAGAGAGTGCCCACAAAACTACTGCCTCAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTCTTGTCCTCAGTTTTaGATACAGAGAAACGACCCA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSCPQF*IQRNDP
Trigger: TGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAGA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAGCAGGAAGAACAGCTaGTTCCAAATCCATAAAAGG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDSRKNS*FQIHKR
Trigger: CCTTTTATGGATTTGGAACAAGCTGTTCTTCCTGCT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGCACCTTGCCCAGTTaGGTATACAAAGATTCAATT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGTLPS*VYKDSI
Trigger: AATTGAATCTTTGTATACCAAACTGGGCAAGGTGCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACAGCAGGGGGCACCTaGCCCAGTTTGGTATACAAA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSTAGGT*PSLVYK
Trigger: TTTGTATACCAAACTGGGCAAGGTGCCCCCTGCTGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTGCCCCAACAGTGTTaGTGCTGCTGGTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLPQQC*CCWFLD
Trigger: GTCAAGGAACCAGCAGCACAAACACTGTTGGGGCAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTTGGCTGTTCACTGTaGCCCCAACAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLGCSL*PQQCLC
Trigger: GCACAAACACTGTTGGGGCAACAGTGAACAGCCAAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCATCTCGGGCCCAATaGTCTACCAACTTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSASRAQ*STNLCK
Trigger: CTTGCACAAGTTGGTAGACAATTGGGCCCGAGATGC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCATGGAGATGCACAGTaGCCCAGGTGCAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSHGDAQ*PRCREL
Trigger: AAGTTCTCTGCACCTGGGCAACTGTGCATCTCCATG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACCCGTCCCACTCCATaGAGCGCCAAATGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTRPTP*SAKWGS
Trigger: GCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGCAGTTCCCACAGGTaGGAACTGGCCAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGSSHR*ELAKWL
Trigger: CAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCCAGTAGGTGGTTTTaGTCCTGTGGTTCGGATTCT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPSRWF*SCGSDS
Trigger: AGAATCCGAACCACAGGACAAAAACCACCTACTGGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTAAGTTGTCCAATTTaGTTACAACACCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDLSCPI*LQHPLL
Trigger: GAGGAGGGGGTGTTGTAACAAAATTGGACAACTTAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATCTGAGGTTCGCCTaGGATAGTTGGTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSDLRFA*DSWYWL
Trigger: CAGCCAGTACCAACTATCCAAGGCGAACCTCAGATC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGAACCTCAGCAGCTaGTCCAAGGTTAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWNLSS*SKVSWY
Trigger: ATACCAGCTAACCTTGGACAAGCTGCTGAGGTTCCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTACTCTCCAAAACTGCTaGCTGGGAGGATGTAGTGGG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSTLQNC*LGGCSG
Trigger: CCCACTACATCCTCCCAGCAAGCAGTTTTGGAGAGT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGACTGAGGCACACTaGAGGGTGGATATACCCCAT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSWTEAH*RVDIPH
Trigger: ATGGGGTATATCCACCCTCAAGTGTGCCTCAGTCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAACTTCGCACAGCCTaGACCTGGAGCAGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSKLRTA*TWSRKA
Trigger: AGCCTTTCTGCTCCAGGTCAAGGCTGTGCGAAGTTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS TCA 90 bp GCAGAAGTCACTGTGATCATCTCTGGACTAAGTGTTCTTCTCAATTaGGCATCAAGATCCTCTAGAGGTTGCTGGGACTGGGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: AEVTVIISGLSVLLN*ASRSSRGCWDWVRE
Trigger: TTCTCTAACCCAGTCCCAGCAACCTCTAGAGGATCTTGATGCTCAATTGAGAAGAACACTTAGTCCAGAGATGATCACAGTGACTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 90 bp AAAGACAGGGTGAAATTTCAAACGTGTAGCATCTGTACTGATAGGTaGAGAAATACTAGAGAGGGGAGATCCCGGACCCAATCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KDRVKFQTCSICTDR*RNTREGRSRTQSRI
Trigger: GATTCTGGATTGGGTCCGGGATCTCCCCTCTCTAGTATTTCTGCACCTATCAGTACAGATGCTACACGTTTGAAATTTCACCCTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS GCA 90 bp AGGTACTACTGGAAATGTTGGTCCTGTATGACTAAAGTTTGGAGGTaGTGTGTTGGGTCCTTCTGTCATTTGGGCACGTCTAAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: RYYWKCWSCMTKVWR*CVGSFCHLGTSKFR
Trigger: TCTGAACTTAGACGTGCCCAAATGACAGAAGGACCCAACACAGCACCTCCAAACTTTAGTCATACAGGACCAACATTTCCAGTAGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCGACACTGGGCGGTCTTaGCTGGTACTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: TNIENPISHKYNGSPPEFDTGRS*LVLLGT
Trigger: TGTCCCCAGCAGTACCAGCAAAGACCGCCCAGTGTC...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp ACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCTGAGTTCAAGCCCGCTTCAGGGTaGCCAGACCGAGGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: TNIENPISHKYNGSPPEFKPASG*PDRGLQ
Trigger: TTGGAGACCTCGGTCTGGCAACCCTGAAGCGGGCTT...GAACTCAGGAGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTACCTATCACACTCTaGGCAAAAGAAGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSVPITL*AKEARF
Trigger: GAAGCGGGCTTCTTTTGCCAAGAGTGTGATAGGTAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAATGATACTCTGTCTTaGATAGCTTTAGCCATGGTC +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNDTLS*IALAMV
Trigger: GACCATGGCTAAAGCTATCAAAGACAGAGTATCATT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGTTCTACCTGCTGTTaGAGACTGCTCTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSCSTCC*RLLSSC
Trigger: GCAGGAAGAGAGCAGTCTCAAACAGCAGGTAGAACA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGGGAAGCACTGGATaGTTCTACCTGCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLGSTG*FYLLFE
Trigger: CTCAAACAGCAGGTAGAACAATCCAGTGCTTCCCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGTCCTCAGCAGGGGTaGGAAGTGGTGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSPQQG*EVVSLG
Trigger: GCCCAAACTCACCACTTCCAACCCCTGCTGAGGACT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTGAGATGTGGTTCCTaGGGGGAAACAGAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLRCGS*GETEEK
Trigger: CTTTTCTTCTGTTTCCCCCAAGGAACCACATCTCAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCCCTGTTAAGCTACTaGAGGATGGCTGACCCTGGC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPLLSY*RMADPG
Trigger: GCCAGGGTCAGCCATCCTCAAGTAGCTTAACAGGGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTGGCCTCACTGGAGGTaGATGTCTGTGAAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLWPHWR*MSVKVN
Trigger: ATTCACTTTCACAGACATCAACCTCCAGTGAGGCCA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGATGGGACGTTCTCATaGCCATCACTCATACCTGAA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLDGTFS*PSLIPE
Trigger: TTCAGGTATGAGTGATGGCAATGAGAACGTCCCATC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAATAATTTCTCGCACTaGATCCACAAACGACTCTCT +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNNFSH*IHKRLS
Trigger: AGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTATT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGGTCCTTCTGTCATTaGGGCACGTCTAAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSGSFCH*GTSKFR
Trigger: TCTGAACTTAGACGTGCCCAAATGACAGAAGGACCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGCTGCTGCTGTGGTaGGGACTCCAGCAATGCTAC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWLLLW*GLQQCY
Trigger: GTAGCATTGCTGGAGTCCCAACCACAGCAGCAGCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGTAGGTCCTGCTGCTaGGGGAAGAATAGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSRSCC*GKNRSR
Trigger: TCTACTCCTATTCTTCCCCAAGCAGCAGGACCTACT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGGCCTTCTTTGACTaGAGAAACACCCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSRAFFD*RNTLLR
Trigger: CCTCAGAAGGGTGTTTCTCAAGTCAAAGAAGGCCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTCTGGACTACTACTaGATAGCACTGAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSLDYY*IALRTL
Trigger: CAGAGTCCTCAGTGCTATCAAGTAGTAGTCCAGAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGAGAAACGACCCACTTaGTTTGCTGTAGTTGTCACC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLEKRPT*FAVVVT
Trigger: GGTGACAACTACAGCAAACAAAGTGGGTCGTTTCTC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTAGATTTGCTGCCTTaGCTTTTAGTGGGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLDLLP*LLVGRR
Trigger: ACGACGACCCACTAAAAGCAAAGGCAGCAAATCTAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATGGGTTTGATTTTACATaGAGTTCTCCAGCTTCCTTA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDGFDFT*SSPASL
Trigger: TAAGGAAGCTGGAGAACTCAATGTAAAATCAAACCC...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATAATAACACTGATTGGTaGCAGTTATTACTTACGGGG +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDNNTDW*QLLLTG
Trigger: CCCCGTAAGTAATAACTGCAACCAATCAGTGTTATT...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCCCAGAATATGCCATaGACGTGGGTAAAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSQNMP*TWVKGW
Trigger: CCAACCTTTTACCCACGTCAATGGCATATTCTGGGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTGGGTGAACCTGACTaGGCAGCTGAGTCACAGGCT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVGEPD*AAESQA
Trigger: AGCCTGTGACTCAGCTGCCAAGTCAGGTTCACCCAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCTGGCTGGGACACTaGAACCTGTCCTCCTACACC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSWLGH*NLSSYT
Trigger: GGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp AGTGCTGTACTAGAAACAACGATCTCAGATGTGGATGTGGGGACTTaGAGTGACGGGGATGTAGTAGATATTGAGACAACTGCAGGTATT +
Preference number: 5 (lower is better)
Translates to: SAVLETTISDVDVGT*SDGDVVDIETTAGI
Trigger: AATACCTGCAGTTGTCTCAATATCTACTACATCCCCGTCACTTCAAGTCCCCACATCCACATCTGAGATCGTTGTTTCTAGTACAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCGGTGATAAAGATGTaGTCACATTTAAGATCGCGG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPVIKM*SHLRSR
Trigger: CCGCGATCTTAAATGTGACAACATCTTTATCACCGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCAGGAATTGCTACTTaGTCAAAACTGGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSGIAT*SKLAGF
Trigger: GAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGACTCTACCATTTCTaGTGCAACATCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRLYHF*CNIFWD
Trigger: GTCCCAGAAGATGTTGCACAAGAAATGGTAGAGTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCTCCTGAAGAGGAGCTaGGTGTGTGAACATGAAATT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLLLKRS*VCEHEI
Trigger: AATTTCATGTTCACACACCAAGCTCCTCTTCAGGAG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGGAGGCAGTTCTTCTaGATTCAAGTCCACTGCAAC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSRRQFF*IQVHCN
Trigger: GTTGCAGTGGACTTGAATCAAGAAGAACTGCCTCCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGAGATGTGGTTCCTaGGGGGAAACAGAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLRCGS*GETEEK
Trigger: CTTTTCTTCTGTTTCCCCCAAGGAACCACATCTCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAATACTGCACTGTCTGTaGAGGAGGGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKILHCL*RRGCLL
Trigger: CAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTAT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTGGCCTCACTGGAGGTaGATGTCTGTGAAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSWPHWR*MSVKVN
Trigger: ATTCACTTTCACAGACATCAACCTCCAGTGAGGCCA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAAGACTTGTGGAGCTaGAGGCTGACTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQDLWS*RLTHWL
Trigger: CAGCCAGTGAGTCAGCCTCAAGCTCCACAAGTCTTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGATGGGACGTTCTCATaGCCATCACTCATACCTGAA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSDGTFS*PSLIPE
Trigger: TTCAGGTATGAGTGATGGCAATGAGAACGTCCCATC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGACGCAGGAATTGGTaGTTTGAACTCTCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRRRNW*FELSFQ
Trigger: TTGGAAGGAGAGTTCAAACAACCAATTCCTGCGTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTAGAAGTCAGGAGTTaGCTTGGTGCAACAGCAGTA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSVEVRS*LGATAV
Trigger: TACTGCTGTTGCACCAAGCAAACTCCTGACTTCTAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTCTGGACTACTACTaGATAGCACTGAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSLDYY*IALRTL
Trigger: CAGAGTCCTCAGTGCTATCAAGTAGTAGTCCAGAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAAACGACCCACTTaGTTTGCTGTAGTTGTCACC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSEKRPT*FAVVVT
Trigger: GGTGACAACTACAGCAAACAAAGTGGGTCGTTTCTC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GGACTGCTGGGGTCACATGGACCTACGATTTCCTTCCACATGCCCTTTATTGATTTTGTGTCAGTGATCTaGTCCTCAGTTTTTGATACA +
Preference number: 5 (lower is better)
Translates to: GLLGSHGPTISFHMPFIDFVSVI*SSVFDT
Trigger: TGTATCAAAAACTGAGGACAAGATCACTGACACAAA...ATCAATAAAGGGCATGTGGAAGGAAATCGTAGGTCCATGTGACCCCAGCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAGGCTTCTCTTTCTTaGGTATCACAGCAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQASLS*VSQQEE
Trigger: TTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTGCTGCTGGTTCCTaGACCTGGAGCAGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCAAGS*TWSRKA
Trigger: AGCCTTTCTGCTCCAGGTCAAGGAACCAGCAGCACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCCAGGCATCACGTTaGTTTCCTCATTCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSGQASR*FPHSLV
Trigger: GACTAAAGAATGAGGAAACAAACGTGATGCCTGGCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGAACAACCGAGGGTaGTGTCGCAACTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWNNRG*CRNWDL
Trigger: CAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAAGAGGGAGCAATATTaGAATCTCCTGGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLKREQY*NLLGTV
Trigger: CACAGTACCCAGGAGATTCAAATATTGCTCCCTCTT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCAAACAGAAGCCACGTaGGAAGAGGGAGCAATATTT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLQTEAT*EEGAIF
Trigger: AAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp ATGCTACTTAAGAAAGGAGGTACTACTGGAAATGTTGGTCCTGTATaGCTAAAGTTTGGAGGTGCTGTGTTGGGTCCTTCTGTCATTTGG +
Preference number: 5 (lower is better)
Translates to: MLLKKGGTTGNVGPV*LKFGGAVLGPSVIW
Trigger: CCAAATGACAGAAGGACCCAACACAGCACCTCCAAACTTTAGTCATACAGGACCAACATTTCCAGTAGTACCTCCTTTCTTAAGTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTTCCAGTGCAGTGGCATaGGAGTCACAGATGACGCTC +
Preference number: 5 (lower is better)
Translates to: PRSTNIENPISHKYNGSPSSAVA*ESQMTL
Trigger: GAGCGTCATCTGTGACTCCAATGCCACTGCACTGGA...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTGACATTCCCACGGCCTaGGTCTCCAGCTCTTCGATA +
Preference number: 5 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITDIPTA*VSSSSI
Trigger: TATCGAAGAGCTGGAGACCAAGGCCGTGGGAATGTC...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTGCCTCTCAGACTTaGTTAATTTTCGATCCTGCA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSASQT*LIFDPA
Trigger: TGCAGGATCGAAAATTAACAAAGTCTGAGAGGCAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCCGGTGATAAAGATGTaGTCACATTTAAGATCGCGG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSPVIKM*SHLRSR
Trigger: CCGCGATCTTAAATGTGACAACATCTTTATCACCGG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCAGGAATTGCTACTTaGTCAAAACTGGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSGIAT*SKLAGF
Trigger: GAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCCTTCACTTCAGGAATaGCTACTTTGTCAAAACTGG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLPSLQE*LLCQNW
Trigger: CCAGTTTTGACAAAGTAGCAATTCCTGAAGTGAAGG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGACTCTACCATTTCTaGTGCAACATCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSRLYHF*CNIFWD
Trigger: GTCCCAGAAGATGTTGCACAAGAAATGGTAGAGTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGTGGAAGAAGACTTaGGCCAACAGTCCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRWKKT*ANSPQQ
Trigger: CTGCTGAGGACTGTTGGCCAAAGTCTTCTTCCACCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTCCTGAAGAGGAGCTaGGTGTGTGAACATGAAATT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLKRS*VCEHEI
Trigger: AATTTCATGTTCACACACCAAGCTCCTCTTCAGGAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCAGGAATTGGTTGTTaGAACTCTCCTTCCAATTTC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLAGIGC*NSPSNF
Trigger: GAAATTGGAAGGAGAGTTCAAACAACCAATTCCTGC...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGACGCAGGAATTGGTaGTTTGAACTCTCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSRRRNW*FELSFQ
Trigger: TTGGAAGGAGAGTTCAAACAACCAATTCCTGCGTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGTAGGAATGCCTATTaGCTGTGGCATGGAAGACGC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGRNAY*LWHGRR
Trigger: GCGTCTTCCATGCCACAGCAAATAGGCATTCCTACC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGCACTGGGGAAAACTTTaGATTCTCGTAATCGGCTTT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLHWGKL*ILVIGF
Trigger: AAAGCCGATTACGAGAATCAAAAGTTTTCCCCAGTG...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGAAAGCCAATCCAGTaGTACTGCTATGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLRKPIQ*YCYEMS
Trigger: AGACATCTCATAGCAGTACAACTGGATTGGCTTTCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTACAGCAGGCACATaGGCAACAGGCTGTACCAAG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCTAGT*ATGCTK
Trigger: CTTGGTACAGCCTGTTGCCAATGTGCCTGCTGTACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCCAGGAGCTTTGGGTaGTGTATCAGAATCTACTTC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSRSFG*CIRIYF
Trigger: GAAGTAGATTCTGATACACAACCCAAAGCTCCTGGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTCTTGTCCTCAGTTTTaGATACAGAGAAACGACCCA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSCPQF*IQRNDP
Trigger: TGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAGA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAGCAGGAAGAACAGCTaGTTCCAAATCCATAAAAGG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLSRKNS*FQIHKR
Trigger: CCTTTTATGGATTTGGAACAAGCTGTTCTTCCTGCT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAGGCTTCTCTTTCTTaGGTATCACAGCAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSQASLS*VSQQEE
Trigger: TTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAACAGCAGGGGGCACCTaGCCCAGTTTGGTATACAAA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKTAGGT*PSLVYK
Trigger: TTTGTATACCAAACTGGGCAAGGTGCCCCCTGCTGT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCTGCTTCGACTAGATTaGCTGCCTTTGCTTTTAGTG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLLRLD*LPLLLV
Trigger: CACTAAAAGCAAAGGCAGCAAATCTAGTCGAAGCAG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATTGCCCCAACAGTGTTaGTGCTGCTGGTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLPQQC*CCWFLD
Trigger: GTCAAGGAACCAGCAGCACAAACACTGTTGGGGCAA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTTGGCTGTTCACTGTaGCCCCAACAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLGCSL*PQQCLC
Trigger: GCACAAACACTGTTGGGGCAACAGTGAACAGCCAAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCATCTCGGGCCCAATaGTCTACCAACTTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKASRAQ*STNLCK
Trigger: CTTGCACAAGTTGGTAGACAATTGGGCCCGAGATGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACATGGAGATGCACAGTaGCCCAGGTGCAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKHGDAQ*PRCREL
Trigger: AAGTTCTCTGCACCTGGGCAACTGTGCATCTCCATG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGATCTGAGGTTCGCCTaGGATAGTTGGTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDLRFA*DSWYWL
Trigger: CAGCCAGTACCAACTATCCAAGGCGAACCTCAGATC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAAGAGGGAGCAATATTaGAATCTCCTGGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSKREQY*NLLGTV
Trigger: CACAGTACCCAGGAGATTCAAATATTGCTCCCTCTT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCAAACAGAAGCCACGTaGGAAGAGGGAGCAATATTT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSQTEAT*EEGAIF
Trigger: AAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGACTGAGGCACACTaGAGGGTGGATATACCCCAT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWTEAH*RVDIPH
Trigger: ATGGGGTATATCCACCCTCAAGTGTGCCTCAGTCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000537687.5
CDS TCA 90 bp GTAAACTTGAGATGGTTCAAACATAGGATGGACCTGTATCTCACATaGCTCTCCAGTTACTCTACTGGCTGTAGTACCCAACATAACTAC +
Preference number: 5 (lower is better)
Translates to: VNLRWFKHRMDLYLT*LSSYSTGCSTQHNY
Trigger: GTAGTTATGTTGGGTACTACAGCCAGTAGAGTAACTGGAGAGTCATGTGAGATACAGGTCCATCCTATGTTTGAACCATCTCAAGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS TCA 90 bp AACTGGCTCTGCAGGAGCAACCTGAGAGACTCCCTGAGTACTCTGTaGATCGAAAAGATAACTCAAATCTCGGTAGTAATAGATTTATCA +
Preference number: 5 (lower is better)
Translates to: NWLCRSNLRDSLSTL*IEKITQISVVIDLS
Trigger: TGATAAATCTATTACTACCGAGATTTGAGTTATCTTTTCGATTCACAGAGTACTCAGGGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545055.1
CDS GCA 90 bp CTGAAGAGGAGCTTGGTGTGTGAACATGAAATTCAAATACACAGTTaGTTCTGCTCTCATTGTTATGAGTTAACACAGCAGGCGCAGAAT +
Preference number: 5 (lower is better)
Translates to: LKRSLVCEHEIQIHS*FCSHCYELTQQAQN
Trigger: ATTCTGCGCCTGCTGTGTTAACTCATAACAATGAGAGCAGAAGCAACTGTGTATTTGAATTTCATGTTCACACACCAAGCTCCTCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000574679.1
ENST00000674810.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTGCCTCTCAGACTTaGTTAATTTTCGATCCTGCA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSASQT*LIFDPA
Trigger: TGCAGGATCGAAAATTAACAAAGTCTGAGAGGCAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTACCTATCACACTCTaGGCAAAAGAAGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVPITL*AKEARF
Trigger: GAAGCGGGCTTCTTTTGCCAAGAGTGTGATAGGTAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATGATACTCTGTCTTaGATAGCTTTAGCCATGGTC +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNDTLS*IALAMV
Trigger: GACCATGGCTAAAGCTATCAAAGACAGAGTATCATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGTTCTACCTGCTGTTaGAGACTGCTCTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKCSTCC*RLLSSC
Trigger: GCAGGAAGAGAGCAGTCTCAAACAGCAGGTAGAACA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGGCTGAGACTGTGCTaGGACAGTAGAAGGTATATG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGLRLC*DSRRYM
Trigger: CATATACCTTCTACTGTCCAAGCACAGTCTCAGCCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATAATTTCTCGCACTaGATCCACAAACGACTCTCT +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNNFSH*IHKRLS
Trigger: AGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTCACTGGGGAAAACTTTaGATTCTCGTAATCGGCTTT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSHWGKL*ILVIGF
Trigger: AAAGCCGATTACGAGAATCAAAAGTTTTCCCCAGTG...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGAAAGCCAATCCAGTaGTACTGCTATGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSRKPIQ*YCYEMS
Trigger: AGACATCTCATAGCAGTACAACTGGATTGGCTTTCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTCCTAGTGGTAAATaGGTTGGTGGTAAGCAAGTA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSVPSGK*VGGKQV
Trigger: TACTTGCTTACCACCAACCAATTTACCACTAGGAAC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGGGCCTTCTTTGACTaGAGAAACACCCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKRAFFD*RNTLLR
Trigger: CCTCAGAAGGGTGTTTCTCAAGTCAAAGAAGGCCCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTCTTGTCCTCAGTTTTaGATACAGAGAAACGACCCA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSCPQF*IQRNDP
Trigger: TGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAGA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAGCAGGAAGAACAGCTaGTTCCAAATCCATAAAAGG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSSRKNS*FQIHKR
Trigger: CCTTTTATGGATTTGGAACAAGCTGTTCTTCCTGCT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGGCACCTTGCCCAGTTaGGTATACAAAGATTCAATT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSGTLPS*VYKDSI
Trigger: AATTGAATCTTTGTATACCAAACTGGGCAAGGTGCC...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTAAGTTGTCCAATTTaGTTACAACACCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSLSCPI*LQHPLL
Trigger: GAGGAGGGGGTGTTGTAACAAAATTGGACAACTTAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGAATAACACTGATTGGTaGCAGTTATTACTTACGGGG +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLNNTDW*QLLLTG
Trigger: CCCCGTAAGTAATAACTGCAACCAATCAGTGTTATT...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGAACCTCAGCAGCTaGTCCAAGGTTAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWNLSS*SKVSWY
Trigger: ATACCAGCTAACCTTGGACAAGCTGCTGAGGTTCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTCCTGCCACCAGGTTaGAATGTCACCTGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLLPPG*NVTCSD
Trigger: ATCTGAACAGGTGACATTCAAACCTGGTGGCAGGAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTATTTATACAATCCTTTaGAGGGCAGCAGCAGCAATG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSIYTIL*RAAAAM
Trigger: CATTGCTGCTGCTGCCCTCAAAAGGATTGTATAAAT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS GCA 90 bp AGGTACTCTCTGGACTACTACTTGATAGCACTGAGGACTCTGAGGTaGTGGATTCAAAATGAACAGACTTTGCATCTTCTGACTTATTTT +
Preference number: 5 (lower is better)
Translates to: RYSLDYYLIALRTLR*WIQNEQTLHLLTYF
Trigger: AAAATAAGTCAGAAGATGCAAAGTCTGTTCATTTTGAATCCAGCACCTCAGAGTCCTCAGTGCTATCAAGTAGTAGTCCAGAGAGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATGATACTCTGTCTTaGATAGCTTTAGCCATGGTC +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSNDTLS*IALAMV
Trigger: GACCATGGCTAAAGCTATCAAAGACAGAGTATCATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATGGCCTCACTGGAGGTaGATGTCTGTGAAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKWPHWR*MSVKVN
Trigger: ATTCACTTTCACAGACATCAACCTCCAGTGAGGCCA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGATGGGACGTTCTCATaGCCATCACTCATACCTGAA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDGTFS*PSLIPE
Trigger: TTCAGGTATGAGTGATGGCAATGAGAACGTCCCATC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATAATTTCTCGCACTaGATCCACAAACGACTCTCT +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSNNFSH*IHKRLS
Trigger: AGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGTAGAAGTCAGGAGTTaGCTTGGTGCAACAGCAGTA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKVEVRS*LGATAV
Trigger: TACTGCTGTTGCACCAAGCAAACTCCTGACTTCTAC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTCTGGACTACTACTaGATAGCACTGAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSLDYY*IALRTL
Trigger: CAGAGTCCTCAGTGCTATCAAGTAGTAGTCCAGAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGAGAAACGACCCACTTaGTTTGCTGTAGTTGTCACC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKEKRPT*FAVVVT
Trigger: GGTGACAACTACAGCAAACAAAGTGGGTCGTTTCTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp GTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTGTTTGTGTCAGTGATCTaGTCCTCAGTTTTTGATACA +
Preference number: 5 (lower is better)
Translates to: VQFCYNTPSSLFPKQNFLFVSVI*SSVFDT
Trigger: TGTATCAAAAACTGAGGACAAGATCACTGACACAAA...CAGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTAGATTTGCTGCCTTaGCTTTTAGTGGGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLDLLP*LLVGRR
Trigger: ACGACGACCCACTAAAAGCAAAGGCAGCAAATCTAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTAATAACACTGATTGGTaGCAGTTATTACTTACGGGG +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSNNTDW*QLLLTG
Trigger: CCCCGTAAGTAATAACTGCAACCAATCAGTGTTATT...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCCAGAATATGCCATaGACGTGGGTAAAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSQNMP*TWVKGW
Trigger: CCAACCTTTTACCCACGTCAATGGCATATTCTGGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTCTCAGACAGGAATTaGCTCTACTCAGCCAACAAC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLSDRN*LYSANN
Trigger: GTTGTTGGCTGAGTAGAGCAAATTCCTGTCTGAGAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCAGGAATTGCTACTTaGTCAAAACTGGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSGIAT*SKLAGF
Trigger: GAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGACAGTACTGATGAGTaGTATGGAATGCCCTCATAC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKDSTDE*YGMPSY
Trigger: GTATGAGGGCATTCCATACAACTCATCAGTACTGTC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTCCTGAAGAGGAGCTaGGTGTGTGAACATGAAATT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLLKRS*VCEHEI
Trigger: AATTTCATGTTCACACACCAAGCTCCTCTTCAGGAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCCAGGAGCTTTGGGTaGTGTATCAGAATCTACTTC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSRSFG*CIRIYF
Trigger: GAAGTAGATTCTGATACACAACCCAAAGCTCCTGGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TGTCCAATTTTGTTACAACACCCCCTCCTCACTATTCCCGAAACAGAACTTTCTTTTGTGTCAGTGATCTaGTCCTCAGTTTTTGATACA +
Preference number: 5 (lower is better)
Translates to: CPILLQHPLLTIPETELSFVSVI*SSVFDT
Trigger: TGTATCAAAAACTGAGGACAAGATCACTGACACAAA...AGAAAGTTCTGTTTCGGGAATAGTGAGGAGGGGGTGTTGTAACAAAATTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAGGCTTCTCTTTCTTaGGTATCACAGCAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQASLS*VSQQEE
Trigger: TTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGCTTCGACTAGATTaGCTGCCTTTGCTTTTAGTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLLRLD*LPLLLV
Trigger: CACTAAAAGCAAAGGCAGCAAATCTAGTCGAAGCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAAGAGGGAGCAATATTaGAATCTCCTGGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKKREQY*NLLGTV
Trigger: CACAGTACCCAGGAGATTCAAATATTGCTCCCTCTT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACAAACAGAAGCCACGTaGGAAGAGGGAGCAATATTT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKQTEAT*EEGAIF
Trigger: AAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTATACCTATCACACTCTaGGCAAAAGAAGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PRSTNIENPISHKYNGSPIPITL*AKEARF
Trigger: GAAGCGGGCTTCTTTTGCCAAGAGTGTGATAGGTAT...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS TCA 90 bp TTAATTAATGATACTCTGTCTTTGATAGCTTTAGCCATGGTCTTGTaGTCACCTTCACAGACATACCCAGACTCTACCATTTCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: LINDTLSLIALAMVL*SPSQTYPDSTISCA
Trigger: TGCACAAGAAATGGTAGAGTCTGGGTATGTCTGTGAAGGTGATCACAAGACCATGGCTAAAGCTATCAAAGACAGAGTATCATTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540360.5
ENST00000675631.1
CDS GCA 90 bp TTGCTCTACTCAGCCAACAACAGATTTATTCTAGATGGACAAAACTaGATGCCCAACAGCAGGAAAACTATTCTGTTAATATTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LLYSANNRFILDGQN*MPNSRKTILLIFLL
Trigger: CAGAAGGAATATTAACAGAATAGTTTTCCTGCTGTTGGGCATGCAGTTTTGTCCATCTAGAATAAATCTGTTGTTGGCTGAGTAGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTGCCTCTCAGACTTaGTTAATTTTCGATCCTGCA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSASQT*LIFDPA
Trigger: TGCAGGATCGAAAATTAACAAAGTCTGAGAGGCAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS-3UTR CAA 90 bp CCAAGAAGCACAAATATAGAGAATCCTATATCTCATAAGTACAATGGATCACCTCCGGTGATAAAGATGTaGTCACATTTAAGATCGCGG +
Preference number: 5 (lower is better)
Translates to: PRSTNIENPISHKYNGSPPVIKM*SHLRSR
Trigger: CCGCGATCTTAAATGTGACAACATCTTTATCACCGG...AGGTGATCCATTGTACTTATGAGATATAGGATTCTCTATATTTGTGCTTCTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACCTTCACTTCAGGAATaGCTACTTTGTCAAAACTGG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKPSLQE*LLCQNW
Trigger: CCAGTTTTGACAAAGTAGCAATTCCTGAAGTGAAGG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGCAGGAATTGGTTGTTaGAACTCTCCTTCCAATTTC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKAGIGC*NSPSNF
Trigger: GAAATTGGAAGGAGAGTTCAAACAACCAATTCCTGC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTAGTGGTAAATTGGTaGGTGGTAAGCAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLVVNW*VVSKYL
Trigger: CAAGTACTTGCTTACCACCAACCAATTTACCACTAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAATCTTGTCCTCAGTTTTaGATACAGAGAAACGACCCA +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSCPQF*IQRNDP
Trigger: TGGGTCGTTTCTCTGTATCAAAAACTGAGGACAAGA...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAGCAGGAAGAACAGCTaGTTCCAAATCCATAAAAGG +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKSRKNS*FQIHKR
Trigger: CCTTTTATGGATTTGGAACAAGCTGTTCTTCCTGCT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAGGCACCTTGCCCAGTTaGGTATACAAAGATTCAATT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKGTLPS*VYKDSI
Trigger: AATTGAATCTTTGTATACCAAACTGGGCAAGGTGCC...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS TCA 90 bp TCCTCACTGAGCATTTCATCAGCTTTTTCAATAATTTCTCGCACTTaGTCCACAAACGACTCTCTCTCTATTGCTAGAATAAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: SSLSISSAFSIISRT*STNDSLSIARIKSL
Trigger: CAATGACTTTATTCTAGCAATAGAGAGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTATTGAAAAAGCTGATGAAATGCTCAGTGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000534872.1
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS-3UTR CAA 90 bp ACAATGGATCACCTCCTGAGTTCAAGCTATGAATTTCTTAAGGTTTATATCACTTCTGCCTCTCAGACTTaGTTAATTTTCGATCCTGCA +
Preference number: 5 (lower is better)
Translates to: TMDHLLSSSYEFLKVYITSASQT*LIFDPA
Trigger: TGCAGGATCGAAAATTAACAAAGTCTGAGAGGCAGA...AGTGATATAAACCTTAAGAAATTCATAGCTTGAACTCAGGAGGTGATCCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447667.2
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAAAATGATACTCTGTCTTaGATAGCTTTAGCCATGGTC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKNDTLS*IALAMV
Trigger: GACCATGGCTAAAGCTATCAAAGACAGAGTATCATT...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
CDS-3UTR CAA 90 bp TTATGTTCAGTTTCTTCTAGGTCACGTCTGTTCAAGCCTAGCTCAAATAAGAAACTGAAACACAGTTTCTaGTTTAACACTAGCCATGCT +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSRLFKPSSNKKLKHSF*FNTSHA
Trigger: AGCATGGCTAGTGTTAAACAAGAAACTGTGTTTCAG...TTTCTTATTTGAGCTAGGCTTGAACAGACGTGACCTAGAAGAAACTGAACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS TCA 72 bp GCCGGGCGGGCGGTGGCAGCAGAGGCGCCGCAGTCATaGGGGGAGGGCCAGGGGCCGGCACCGAGTCGAGGC +
Preference number: 6 (lower is better)
Translates to: AGRAVAAEAPQS*GEGQGPAPSRG
Trigger: GCCTCGACTCGGTGCCGGCCCCTGGCCCTCCCCTCATGACTGCGGCGCCTCTGCTGCCACCGCCCGCCCGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 72 bp GCTGGGCCCAGCTGCGGCGGGGGCTGGCACCGAGGCTaGTGCGGCTCACGAGGAGGGCTCGAAGGCGGGCGA +
Preference number: 6 (lower is better)
Translates to: AGPSCGGGWHRG*CGSRGGLEGGR
Trigger: TCGCCCGCCTTCGAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCCCCCGCCGCAGCTGGGCCCAGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp CGGGCGGCCGCCTCCTCCCACACGCGCCCCCAGCGATaGGGACCGGCCTCACAGGTCGCCCATCGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: RAAASSHTRPQR*GPASQVAHRPE
Trigger: CTCTGGGCGATGGGCGACCTGTGAGGCCGGTCCCCATCGCTGGGGGCGCGTGTGGGAGGAGGCGGCCGCCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp GACAGGCGGACCGCTGGGCCCAGCTGCGGCGGGGGCTaGCACCGAGGCTGCTGCGGCTCACGAGGAGGGCTC +
Preference number: 6 (lower is better)
Translates to: DRRTAGPSCGGG*HRGCCGSRGGL
Trigger: GAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCCCCCGCCGCAGCTGGGCCCAGCGGTCCGCCTGTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 72 bp GGGCCCAGCTGCGGCGGGGGCTGGCACCGAGGCTGCTaGGGCTCACGAGGAGGGCTCGAAGGCGGGCGATTC +
Preference number: 6 (lower is better)
Translates to: GPSCGGGWHRGC*GSRGGLEGGRF
Trigger: GAATCGCCCGCCTTCGAGCCCTCCTCGTGAGCCGCAGCAGCCTCGGTGCCAGCCCCCGCCGCAGCTGGGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp GCCCGCGACGGCCTGTTCCCCAGGGGCGGCAGCGGCTaGAGGCTGCTGGGCTACCTGGGAAGTGGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: ARDGLFPRGGSG*RLLGYLGSGGG
Trigger: GCCACCGCCACTTCCCAGGTAGCCCAGCAGCCTCCAGCCGCTGCCGCCCCTGGGGAACAGGCCGTCGCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp GGTGGCGGTCACGGTCTCTTCCCGGTGGGGCTCCGGTaGAGCACTCTGCGGGACAGCCGCGGGGATGCTGGG +
Preference number: 6 (lower is better)
Translates to: GGGHGLFPVGLR*STLRDSRGDAG
Trigger: CCCAGCATCCCCGCGGCTGTCCCGCAGAGTGCTCCACCGGAGCCCCACCGGGAAGAGACCGTGACCGCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp CCAGGGGCGGCAGCGGCTGGAGGCTGCTGGGCTACCTaGGAAGTGGCGGTGGCGGTCACGGTCTCTTCCCGG +
Preference number: 6 (lower is better)
Translates to: PGAAAAGGCWAT*EVAVAVTVSSR
Trigger: CCGGGAAGAGACCGTGACCGCCACCGCCACTTCCCAGGTAGCCCAGCAGCCTCCAGCCGCTGCCGCCCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp GTCGCGGCCGCCCCACGGCTGTCCTTGTCCATAGTGTaGCGGCGGCGCCTGTACTCCTCGGTCCTGCCGGTC +
Preference number: 6 (lower is better)
Translates to: VAAAPRLSLSIV*RRRLYSSVLPV
Trigger: GACCGGCAGGACCGAGGAGTACAGGCGCCGCCGCCACACTATGGACAAGGACAGCCGTGGGGCGGCCGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp TGGGAAGTGGCGGTGGCGGTCACGGTCTCTTCCCGGTaGGGCTCCGGTGGAGCACTCTGCGGGACAGCCGCG +
Preference number: 6 (lower is better)
Translates to: WEVAVAVTVSSR*GSGGALCGTAA
Trigger: CGCGGCTGTCCCGCAGAGTGCTCCACCGGAGCCCCACCGGGAAGAGACCGTGACCGCCACCGCCACTTCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp CGGCTGGAGGCTGCTGGGCTACCTGGGAAGTGGCGGTaGCGGTCACGGTCTCTTCCCGGTGGGGCTCCGGTG +
Preference number: 6 (lower is better)
Translates to: RLEAAGLPGKWR*RSRSLPGGAPV
Trigger: CACCGGAGCCCCACCGGGAAGAGACCGTGACCGCCACCGCCACTTCCCAGGTAGCCCAGCAGCCTCCAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CAA 72 bp CCGCCGCTGCCACTTCTCGCCGGCGGCGGCTCCTCTTaGCTCCCCACAAGGCTAGGCTGGGACACTGGGCGG +
Preference number: 6 (lower is better)
Translates to: PPLPLLAGGGSS*LPTRLGWDTGR
Trigger: CCGCCCAGTGTCCCAGCCTAGCCTTGTGGGGAGCAAAGAGGAGCCGCCGCCGGCGAGAAGTGGCAGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS TCA 72 bp TCACGAGGAGGGCTCGAAGGCGGGCGATTCGGGAGCTaGGCCACGGGGGTTAGCGCCGCACGGTCCGCATCC +
Preference number: 6 (lower is better)
Translates to: SRGGLEGGRFGS*ATGVSAARSAS
Trigger: GGATGCGGACCGTGCGGCGCTAACCCCCGTGGCTCAGCTCCCGAATCGCCCGCCTTCGAGCCCTCCTCGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CAA 90 bp CGGTGCTCAGTGGTGGTAGTGGTCGCGGCCGCCCCACGGCTGTCCTaGTCCATAGTGTGGCGGCGGCGCCTGTACTCCTCGGTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: RCSVVVVVAAAPRLS*SIVWRRRLYSSVLP
Trigger: CGGCAGGACCGAGGAGTACAGGCGCCGCCGCCACACTATGGACAAGGACAGCCGTGGGGCGGCCGCGACCACTACCACCACTGAGCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 72 bp CAGGAGCCGGCGGCGAGAGGAACAGGGAACCGGGAGTaGTGCTCTGCTTCTCTGCGGCGCCGCCAGACATGG +
Preference number: 6 (lower is better)
Translates to: QEPAARGTGNRE*CSASLRRRQTW
Trigger: CCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGTTCCTCTCGCCGCCGGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CAA 72 bp GTGGTGGTAGTGGTCGCGGCCGCCCCACGGCTGTCCTaGTCCATAGTGTGGCGGCGGCGCCTGTACTCCTCG +
Preference number: 6 (lower is better)
Translates to: VVVVVAAAPRLS*SIVWRRRLYSS
Trigger: CGAGGAGTACAGGCGCCGCCGCCACACTATGGACAAGGACAGCCGTGGGGCGGCCGCGACCACTACCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS TCA 72 bp GCCGCTCACCGCGGGGCCCGAGCTCCGCTGCTTCTCTaGGGCAAGAGGAGAGGAGACCTAGAGGACTGGGTG +
Preference number: 6 (lower is better)
Translates to: AAHRGARAPLLL*GKRRGDLEDWV
Trigger: CACCCAGTCCTCTAGGTCTCCTCTCCTCTTGCCTCAGAGAAGCAGCGGAGCTCGGGCCCCGCGGTGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS GCA 72 bp GGCGGCGAGAGGAACAGGGAACCGGGAGTGCTGCTCTaGTTCTCTGCGGCGCCGCCAGACATGGTCGGTTCG +
Preference number: 6 (lower is better)
Translates to: GGERNREPGVLL*FSAAPPDMVGS
Trigger: CGAACCGACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGCACTCCCGGTTCCCTGTTCCTCTCGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp CAGGCGCCTTCTGTCACCGAAGATGGGGGTGCGGAGTaGCCGAGAGAGGAGCCGCGTCCACCCGGGAAACTC +
Preference number: 6 (lower is better)
Translates to: QAPSVTEDGGAE*PREEPRPPGKL
Trigger: GAGTTTCCCGGGTGGACGCGGCTCCTCTCTCGGCCACTCCGCACCCCCATCTTCGGTGACAGAAGGCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
CDS CCA 72 bp GAGTGCTGCTCTGCTTCTCTGCGGCGCCGCCAGACATaGTCGGTTCGCTGGAGAGAGGCGAGCGGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: ECCSASLRRRQT*SVRWREASGLG
Trigger: TCCGAGCCCGCTCGCCTCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCGCAGAGAAGCAGAGCAGCACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp CGGCTCCCAGTTTCTCCCCCACGGAGGAATCGGAGCTaGAGCCATTCTTGGGGGCAGGAGCCGGCGGCGAGA +
Preference number: 6 (lower is better)
Translates to: RLPVSPPRRNRS*SHSWGQEPAAR
Trigger: TCTCGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTCCGATTCCTCCGTGGGGGAGAAACTGGGAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CAA 90 bp GCTCCCAGTTTCTCCCCCACGGAGGAATCGGAGCTGGAGCCATTCTaGGGGGCAGGAGCCGGCGGCGAGAGGAACAGGGAACCGGGAGTG +
Preference number: 6 (lower is better)
Translates to: APSFSPTEESELEPF*GAGAGGERNREPGV
Trigger: CACTCCCGGTTCCCTGTTCCTCTCGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTCCGATTCCTCCGTGGGGGAGAAACTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS GCA 72 bp TTGGAGTCACAGATGACGCTCCGGCGGAAGAAGCGGTaGTCAGTGGTGGTAGTGGTCGCGGCCGCCCCACGG +
Preference number: 6 (lower is better)
Translates to: LESQMTLRRKKR*SVVVVVAAAPR
Trigger: CCGTGGGGCGGCCGCGACCACTACCACCACTGAGCACCGCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp TCTCCCCCACGGAGGAATCGGAGCTGGAGCCATTCTTaGGGGCAGGAGCCGGCGGCGAGAGGAACAGGGAAC +
Preference number: 6 (lower is better)
Translates to: SPPRRNRSWSHS*GQEPAARGTGN
Trigger: GTTCCCTGTTCCTCTCGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTCCGATTCCTCCGTGGGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp GCTTCTCTGCGGCGCCGCCAGACATGGTCGGTTCGCTaGAGAGAGGCGAGCGGGCTCGGATTCGTGAACGAA +
Preference number: 6 (lower is better)
Translates to: ASLRRRQTWSVR*REASGLGFVNE
Trigger: TTCGTTCACGAATCCGAGCCCGCTCGCCTCTCTCCAGCGAACCGACCATGTCTGGCGGCGCCGCAGAGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp GGCAGTTCCCACAGGTTGGAACTGGCCAAGTGGCTGTaGTGCTGGGCCACCCGTCCCACTCCATTGAGCGCC +
Preference number: 6 (lower is better)
Translates to: GSSHRLELAKWL*CWATRPTPLSA
Trigger: GGCGCTCAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp TTCTCCCCCACGGAGGAATCGGAGCTGGAGCCATTCTaGGGGGCAGGAGCCGGCGGCGAGAGGAACAGGGAA +
Preference number: 6 (lower is better)
Translates to: FSPTEESELEPF*GAGAGGERNRE
Trigger: TTCCCTGTTCCTCTCGCCGCCGGCTCCTGCCCCCAAGAATGGCTCCAGCTCCGATTCCTCCGTGGGGGAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CAA 90 bp GAACTGGCCAAGTGGCTGTGGTGCTGGGCCACCCGTCCCACTCCATaGAGCGCCAAATGGGGTAGCTGGAAAGCCATACTGCTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: ELAKWLWCWATRPTP*SAKWGSWKAILLWG
Trigger: CCCCCACAGCAGTATGGCTTTCCAGCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp CGGGAAGCTCCAGTGCAGTGGCATTGGAGTCACAGATaGCGCTCCGGCGGAAGAAGCGGTGCTCAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: REAPVQWHWSHR*RSGGRSGAQWW
Trigger: CCACCACTGAGCACCGCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAATGCCACTGCACTGGAGCTTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp GCCTTGGTCTCCAGCTCTTCGATATCATCCTGCTGCTaGCTCCGTTCCTCCTGTGGCTCCTTGGCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: ALVSSSSISSCC*LRSSCGSLALP
Trigger: CGGCAGCGCCAAGGAGCCACAGGAGGAACGGAGCCAGCAGCAGGATGATATCGAAGAGCTGGAGACCAAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CCA 72 bp CCGGAGGAGGGAAGGAGAAAGAGGTGCAGACAGTACTaGCGGTGGGGTGGAAGAGCACTGGGAGAGATGCGG +
Preference number: 6 (lower is better)
Translates to: PEEGRRKRCRQY*RWGGRALGEMR
Trigger: CCGCATCTCTCCCAGTGCTCTTCCACCCCACCGCCAGTACTGTCTGCACCTCTTTCTCCTTCCCTCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS CCA 72 bp TCCCACAGGTTGGAACTGGCCAAGTGGCTGTGGTGCTaGGCCACCCGTCCCACTCCATTGAGCGCCAAATGG +
Preference number: 6 (lower is better)
Translates to: SHRLELAKWLWC*ATRPTPLSAKW
Trigger: CCATTTGGCGCTCAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp CAAGGAGGCAGTTCCCACAGGTTGGAACTGGCCAAGTaGCTGTGGTGCTGGGCCACCCGTCCCACTCCATTG +
Preference number: 6 (lower is better)
Translates to: QGGSSHRLELAK*LWCWATRPTPL
Trigger: CAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCCTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp GCCCTTCCTGCTGGACGTCATGGCAGGAGGCTGAGCTTGGGCGGCTaGGCTGTTCACTGTTGCCCCAACAGTGTTTGTGCTGCTGGTTCC +
Preference number: 6 (lower is better)
Translates to: ALPAGRHGRRLSLGG*AVHCCPNSVCAAGS
Trigger: GGAACCAGCAGCACAAACACTGTTGGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAGCCTCCTGCCATGACGTCCAGCAGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp AGTGGCTGTGGTGCTGGGCCACCCGTCCCACTCCATTaGGCGCCAAATGGGGTAGCTGGAAAGCCATACTGC +
Preference number: 6 (lower is better)
Translates to: SGCGAGPPVPLH*APNGVAGKPYC
Trigger: GCAGTATGGCTTTCCAGCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp AGTTCCCACAGGTTGGAACTGGCCAAGTGGCTGTGGTaGTGGGCCACCCGTCCCACTCCATTGAGCGCCAAA +
Preference number: 6 (lower is better)
Translates to: SSHRLELAKWLW*WATRPTPLSAK
Trigger: TTTGGCGCTCAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp GAAAGAGGAAGGCCGGGAAGCTCCAGTGCAGTGGCATaGGAGTCACAGATGACGCTCCGGCGGAAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: ERGRPGSSSAVA*ESQMTLRRKKR
Trigger: CCGCTTCTTCCGCCGGAGCGTCATCTGTGACTCCAATGCCACTGCACTGGAGCTTCCCGGCCTTCCTCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS CAA 90 bp GCCCTTCCTGCTGGACGTCATGGCAGGAGGCTGAGCTTGGGCGGCTaGGCTGTTCACTGTTGCCCCAACAGTGTTTGTGCTGCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: ALPAGRHGRRLSLGG*AVHCCPNSVCAAGS
Trigger: AGAACCAGCAGCACAAACACTGTTGGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAGCCTCCTGCCATGACGTCCAGCAGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000544559.1
CDS TCA 72 bp AAGAGGGAAGGCAGGCTGGAGCGTCGGTGCTTGCGCTaGGAGGCAGAGTGCATAGGCAGGACACTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: KREGRLERRCLR*EAECIGRTLSN
Trigger: ATTGGAGAGTGTCCTGCCTATGCACTCTGCCTCTCAGCGCAAGCACCGACGCTCCAGCCTGCCTTCCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS GCA 72 bp TGGGGGCAGAGCCACCCAGGTTCGAGGTCATGGAGATaGACAGTTGCCCAGGTGCAGAGAACTTCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: WGQSHPGSRSWR*TVAQVQRTSLP
Trigger: TGGCAAGGAAGTTCTCTGCACCTGGGCAACTGTGCATCTCCATGACCTCGAACCTGGGTGGCTCTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp AAGGAGAAAGAGGTGCAGACAGTACTGGCGGTGGGGTaGAAGAGCACTGGGAGAGATGCGGGACACAGAGGC +
Preference number: 6 (lower is better)
Translates to: KEKEVQTVLAVG*KSTGRDAGHRG
Trigger: GCCTCTGTGTCCCGCATCTCTCCCAGTGCTCTTCCACCCCACCGCCAGTACTGTCTGCACCTCTTTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS CCA 72 bp CAGAGATGGGGGCAGAGCCACCCAGGTTCGAGGTCATaGAGATGCACAGTTGCCCAGGTGCAGAGAACTTCC +
Preference number: 6 (lower is better)
Translates to: QRWGQSHPGSRS*RCTVAQVQRTS
Trigger: GGAAGTTCTCTGCACCTGGGCAACTGTGCATCTCCATGACCTCGAACCTGGGTGGCTCTGCCCCCATCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp AAATTCTGCAAGGAGGCAGTTCCCACAGGTTGGAACTaGCCAAGTGGCTGTGGTGCTGGGCCACCCGTCCCA +
Preference number: 6 (lower is better)
Translates to: KFCKEAVPTGWN*PSGCGAGPPVP
Trigger: TGGGACGGGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCCTCCTTGCAGAATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp AAGTGGCTGTGGTGCTGGGCCACCCGTCCCACTCCATaGAGCGCCAAATGGGGTAGCTGGAAAGCCATACTG +
Preference number: 6 (lower is better)
Translates to: KWLWCWATRPTP*SAKWGSWKAIL
Trigger: CAGTATGGCTTTCCAGCTACCCCATTTGGCGCTCAATGGAGTGGGACGGGTGGCCCAGCACCACAGCCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp ACGTCATGGCAGGAGGCTGAGCTTGGGCGGCTTGGCTGTTCACTGTaGCCCCAACAGTGTTTGTGCTGCTGGTTCCTTGACCTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: TSWQEAELGRLGCSL*PQQCLCCWFLDLEQ
Trigger: CTGCTCCAGGTCAAGGAACCAGCAGCACAAACACTGTTGGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAGCCTCCTGCCATGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp ACGTCATGGCAGGAGGCTGAGCTTGGGCGGCTTGGCTGTTCACTGTaGCCCCAACAGTGTTTGTGCTGCTGGTTCTACAGAGCTGGTTGC +
Preference number: 6 (lower is better)
Translates to: TSWQEAELGRLGCSL*PQQCLCCWFYRAGC
Trigger: GCAACCAGCTCTGTAGAACCAGCAGCACAAACACTGTTGGGGCAACAGTGAACAGCCAAGCCGCCCAAGCTCAGCCTCCTGCCATGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530271.6
ENST00000544559.1
CDS TCA 72 bp TCACTGGAGGGAGATGGCTTAAGGGGCTGTAACAGCTaGTTCTGCCCGGACTCTGGGATGTTGCCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: SLEGDGLRGCNS*FCPDSGMLPGG
Trigger: CCCTCCTGGCAACATCCCAGAGTCCGGGCAGAATCAGCTGTTACAGCCCCTTAAGCCATCTCCCTCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000542424.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp CAAAGTGGTCGGCTGGGTAGCTTGGGTCTGTGCTACTaGAACTGGCTCTGCAGGAGCAACCTGAGAGACTCC +
Preference number: 6 (lower is better)
Translates to: QSGRLGSLGLCY*NWLCRSNLRDS
Trigger: GGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542543.1
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp GGAAGCCAAAGTGGTCGGCTGGGTAGCTTGGGTCTGTaGTACTGCAACTGGCTCTGCAGGAGCAACCTGAGA +
Preference number: 6 (lower is better)
Translates to: GSQSGRLGSLGL*YCNWLCRSNLR
Trigger: TCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACTTTGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542543.1
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp GGAAATGTCATTAGGAGGGCTGCTTGTTGCAGGGACTaGTGCTGTGGCTGCTGCTGTGGTTGGGACTCCAGC +
Preference number: 6 (lower is better)
Translates to: GNVIRRAACCRD*CCGCCCGWDSS
Trigger: GCTGGAGTCCCAACCACAGCAGCAGCCACAGCACCAGTCCCTGCAACAAGCAGCCCTCCTAATGACATTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp AAGACTTTGGCCAACAGTCCTCAGCAGGGGTTGGAAGTGGTGAGTTaGGGCTTCCAGGAAGGAGGTGCTCTTACGCCGCTGGGAAATGGC +
Preference number: 6 (lower is better)
Translates to: KTLANSPQQGLEVVS*GFQEGGALTPLGNG
Trigger: GCCATTTCCCAGCGGCGTAAGAGCACCTCCTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCTGCTGAGGACTGTTGGCCAAAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS CAA 90 bp GCCACCAGGTGGAAGAAGACTTTGGCCAACAGTCCTCAGCAGGGGTaGGAAGTGGTGAGTTTGGGCTTCCAGGAAGGAGGTGCTCTTACG +
Preference number: 6 (lower is better)
Translates to: ATRWKKTLANSPQQG*EVVSLGFQEGGALT
Trigger: CGTAAGAGCACCTCCTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCTGCTGAGGACTGTTGGCCAAAGTCTTCTTCCACCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS CAA 90 bp CTCTGGTGTCCAGTTAGTTGGGCTGCCACCAGGTGGAAGAAGACTTaGGCCAACAGTCCTCAGCAGGGGTTGGAAGTGGTGAGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: LWCPVSWAATRWKKT*ANSPQQGLEVVSLG
Trigger: GCCCAAACTCACCACTTCCAACCCCTGCTGAGGACTGTTGGCCAAAGTCTTCTTCCACCTGGTGGCAGCCCAACTAACTGGACACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS TCA 72 bp CTTTGGCCAACAGTCCTCAGCAGGGGTTGGAAGTGGTaGGTTTGGGCTTCCAGGAAGGAGGTGCTCTTACGC +
Preference number: 6 (lower is better)
Translates to: LWPTVLSRGWKW*VWASRKEVLLR
Trigger: GCGTAAGAGCACCTCCTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCTGCTGAGGACTGTTGGCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS TCA 72 bp AAGGGAGTAGGGAGCGGCTGTCCCACTGGAAGGAAATaGGCACCAGAGTGGACTGGAACAACCGAGGGTTGT +
Preference number: 6 (lower is better)
Translates to: KGVGSGCPTGRK*APEWTGTTEGC
Trigger: ACAACCCTCGGTTGTTCCAGTCCACTCTGGTGCTCATTTCCTTCCAGTGGGACAGCCGCTCCCTACTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS GCA 72 bp CTGGGTAGCTTGGGTCTGTGCTACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGACTCCCTGAGTACTCTG +
Preference number: 6 (lower is better)
Translates to: LGSLGLCYCNWL*RSNLRDSLSTL
Trigger: CAGAGTACTCAGGGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340908.9
ENST00000535572.5
ENST00000542543.1
ENST00000545055.1
ENST00000676347.1
CDS GCA 72 bp GTGGTATGGGGAGACCACCTGAAGTTACCACACCTGTaGTGGTGGCAACTCCAGCAATCCCCTCTTCAGTGG +
Preference number: 6 (lower is better)
Translates to: VVWGDHLKLPHL*WWQLQQSPLQW
Trigger: CCACTGAAGAGGGGATTGCTGGAGTTGCCACCAGCACAGGTGTGGTAACTTCAGGTGGTCTCCCCATACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp AACACCCTTCTGAGGCTGTGTTCCTGCTTCTGTGATTaGTGTTGGAGCCGCCATGGACACAGGACCAACCGC +
Preference number: 6 (lower is better)
Translates to: NTLLRLCSCFCD*CWSRHGHRTNR
Trigger: GCGGTTGGTCCTGTGTCCATGGCGGCTCCAACAGCAATCACAGAAGCAGGAACACAGCCTCAGAAGGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp CTGGGTAGCTTGGGTCTGTGCTACTGCAACTGGCTCTaGAGGAGCAACCTGAGAGACTCCCTGAGTACTCTC +
Preference number: 6 (lower is better)
Translates to: LGSLGLCYCNWL*RSNLRDSLSTL
Trigger: GAGAGTACTCAGGGAGTCTCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CCA 72 bp GGAGAGATGCGGGACACAGAGGCAACAGCAGAAAGATaGGAACACAAACCGACATGCTACGGCCACGACGAG +
Preference number: 6 (lower is better)
Translates to: GEMRDTEATAER*EHKPTCYGHDE
Trigger: CTCGTCGTGGCCGTAGCATGTCGGTTTGTGTTCCCATCTTTCTGCTGTTGCCTCTGTGTCCCGCATCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS CCA 72 bp TCTACAGAGGAAGCCAAAGTGGTCGGCTGGGTAGCTTaGGTCTGTGCTACTGCAACTGGCTCTGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: STEEAKVVGWVA*VCATATGSAGA
Trigger: TGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACTTTGGCTTCCTCTGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542543.1
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp AGAGCCACCCAGGTTCGAGGTCATGGAGATGCACAGTaGCCCAGGTGCAGAGAACTTCCTTGCCATTCCAGG +
Preference number: 6 (lower is better)
Translates to: RATQVRGHGDAQ*PRCRELPCHSR
Trigger: CCTGGAATGGCAAGGAAGTTCTCTGCACCTGGGCAACTGTGCATCTCCATGACCTCGAACCTGGGTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp GATGTTGAAATTCTGCAAGGAGGCAGTTCCCACAGGTaGGAACTGGCCAAGTGGCTGTGGTGCTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: DVEILQGGSSHR*ELAKWLWCWAT
Trigger: GGTGGCCCAGCACCACAGCCACTTGGCCAGTTCCAACCTGTGGGAACTGCCTCCTTGCAGAATTTCAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp ATGTGCACTGTCTACAGAGGAAGCCAAAGTGGTCGGCTGGGTAGCTaGGGTCTGTGCTACTGCAACTGGCTCTGCAGGAGCAACCTGAGA +
Preference number: 6 (lower is better)
Translates to: MCTVYRGSQSGRLGS*GLCYCNWLCRSNLR
Trigger: TCTCAGGTTGCTCCTGCAGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACTTTGGCTTCCTCTGTAGACAGTGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542543.1
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp GAGGCAACAGCAGAAAGATGGGAACACAAACCGACATaGTACGGCCACGACGAGGCACACTTGAGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: EATAERWEHKPT*YGHDEAHLRVD
Trigger: ATCCACCCTCAAGTGTGCCTCGTCGTGGCCGTAGCATGTCGGTTTGTGTTCCCATCTTTCTGCTGTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS GCA 72 bp GTTGGAAGTGGTGAGTTTGGGCTTCCAGGAAGGAGGTaGTCTTACGCCGCTGGGAAATGGCTACTTTCGGTG +
Preference number: 6 (lower is better)
Translates to: VGSGEFGLPGRR*SYAAGKWLLSV
Trigger: CACCGAAAGTAGCCATTTCCCAGCGGCGTAAGAGCACCTCCTTCCTGGAAGCCCAAACTCACCACTTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS CCA 72 bp TGTGCACTGTCTACAGAGGAAGCCAAAGTGGTCGGCTaGGTAGCTTGGGTCTGTGCTACTGCAACTGGCTCT +
Preference number: 6 (lower is better)
Translates to: CALSTEEAKVVG*VAWVCATATGS
Trigger: AGAGCCAGTTGCAGTAGCACAGACCCAAGCTACCCAGCCGACCACTTTGGCTTCCTCTGTAGACAGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542543.1
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp CTGTCCCACTGGAAGGAAATGAGCACCAGAGTGGACTaGAACAACCGAGGGTTGTGTCGCAACTGGGATCTG +
Preference number: 6 (lower is better)
Translates to: LSHWKEMSTRVD*NNRGLCRNWDL
Trigger: CAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCAGTCCACTCTGGTGCTCATTTCCTTCCAGTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 72 bp CGAGGGTTGTGTCGCAACTGGGATCTGAGGTTCGCCTaGGATAGTTGGTACTGGCTGGGAAACTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: RGLCRNWDLRFA*DSWYWLGNWKL
Trigger: CAGCTTCCAGTTTCCCAGCCAGTACCAACTATCCAAGGCGAACCTCAGATCCCAGTTGCGACACAACCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 72 bp CTGTTATCATCAACTGCCAAGTACCTAGGGCGATCATaGCTATCCAGGAGCAATCCTGCCACCCCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: LLSSTAKYLGRS*LSRSNPATPRG
Trigger: CCCCCTGGGGGTGGCAGGATTGCTCCTGGATAGCAATGATCGCCCTAGGTACTTGGCAGTTGATGATAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674810.1
CDS TCA 72 bp GAGAAACACCCTTCTGAGGCTGTGTTCCTGCTTCTGTaGTTGCTGTTGGAGCCGCCATGGACACAGGACCAA +
Preference number: 6 (lower is better)
Translates to: EKHPSEAVFLLL*LLLEPPWTQDQ
Trigger: TTGGTCCTGTGTCCATGGCGGCTCCAACAGCAATCACAGAAGCAGGAACACAGCCTCAGAAGGGTGTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp CTTAGATTCTGGCTAGGAAGGCTCTTTGAGCTCAGCTaGTGGGGCGAGTGTGGACTACCGGAACCATCATCC +
Preference number: 6 (lower is better)
Translates to: LRFWLGRLFELS*WGECGLPEPSS
Trigger: GGATGATGGTTCCGGTAGTCCACACTCGCCCCATCAGCTGAGCTCAAAGAGCCTTCCTAGCCAGAATCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp GGGCCCAATTGTCTACCAACTTGTGCAAGTCATCTGTaGATGTGCCCTTCCTGCTGGACGTCATGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GPNCLPTCASHL*MCPSCWTSWQE
Trigger: CTCCTGCCATGACGTCCAGCAGGAAGGGCACATTCACAGATGACTTGCACAAGTTGGTAGACAATTGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp ACTGGAACAACCGAGGGTTGTGTCGCAACTGGGATCTaGGGTTCGCCTTGGATAGTTGGTACTGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: TGTTEGCVATGI*GSPWIVGTGWE
Trigger: TTCCCAGCCAGTACCAACTATCCAAGGCGAACCTCAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS TCA 72 bp GGGGCTTGTGCTAAACTCCCTCCTGGCTGGGACACTTaGACCTGTCCTCCTACACCACCCATAGGAACTAAA +
Preference number: 6 (lower is better)
Translates to: GACAKLPPGWDT*TCPPTPPIGTK
Trigger: TTTAGTTCCTATGGGTGGTGTAGGAGGACAGGTTCAAGTGTCCCAGCCAGGAGGGAGTTTAGCACAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS GCA 72 bp GACTGGGTTAGAGAAGGTCCTGGAAAAGGTGGCAGCTaGTCGCTGGGTAGAGTACCTGCTGGAAGTTCAGTA +
Preference number: 6 (lower is better)
Translates to: DWVREGPGKGGS*SLGRVPAGSSV
Trigger: TACTGAACTTCCAGCAGGTACTCTACCCAGCGAGCAGCTGCCACCTTTTCCAGGACCTTCTCTAACCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp GGAGATGCACAGTTGCCCAGGTGCAGAGAACTTCCTTaGCATTCCAGGGCCCTCGTAATTCATGTGCCCTTT +
Preference number: 6 (lower is better)
Translates to: GDAQLPRCRELP*HSRALVIHVPF
Trigger: AAAGGGCACATGAATTACGAGGGCCCTGGAATGGCAAGGAAGTTCTCTGCACCTGGGCAACTGTGCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp TTAGAGAAGGTCCTGGAAAAGGTGGCAGCTGCTCGCTaGGTAGAGTACCTGCTGGAAGTTCAGTACCCACTG +
Preference number: 6 (lower is better)
Translates to: LEKVLEKVAAAR*VEYLLEVQYPL
Trigger: CAGTGGGTACTGAACTTCCAGCAGGTACTCTACCCAGCGAGCAGCTGCCACCTTTTCCAGGACCTTCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp AGAGTGGACTGGAACAACCGAGGGTTGTGTCGCAACTaGGATCTGAGGTTCGCCTTGGATAGTTGGTACTGG +
Preference number: 6 (lower is better)
Translates to: RVDWNNRGLCRN*DLRFALDSWYW
Trigger: CCAGTACCAACTATCCAAGGCGAACCTCAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCAGTCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 72 bp GAAATGAGCACCAGAGTGGACTGGAACAACCGAGGGTaGTGTCGCAACTGGGATCTGAGGTTCGCCTTGGAT +
Preference number: 6 (lower is better)
Translates to: EMSTRVDWNNRG*CRNWDLRFALD
Trigger: ATCCAAGGCGAACCTCAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCAGTCCACTCTGGTGCTCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 90 bp GAGGATGTTGTATGGGTTGGGAAGATGAAACCCCTGTTAAGCTACTaGAGGATGGCTGACCCTGGCTCTGCCCCTGTGCCTGTGGATGAA +
Preference number: 6 (lower is better)
Translates to: EDVVWVGKMKPLLSY*RMADPGSAPVPVDE
Trigger: TTCATCCACAGGCACAGGGGCAGAGCCAGGGTCAGCCATCCTCAAGTAGCTTAACAGGGGTTTCATCTTCCCAACCCATACAACATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000574679.1
CDS CAA 90 bp TGGAACAACCGAGGGTTGTGTCGCAACTGGGATCTGAGGTTCGCCTaGGATAGTTGGTACTGGCTGGGAAACTGGAAGCTGTTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: WNNRGLCRNWDLRFA*DSWYWLGNWKLFSS
Trigger: GCTGGAAAACAGCTTCCAGTTTCCCAGCCAGTACCAACTATCCAAGGCGAACCTCAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 90 bp CACTGGAAGGAAATGAGCACCAGAGTGGACTGGAACAACCGAGGGTaGTGTCGCAACTGGGATCTGAGGTTCGCCTTGGATAGTTGGTAC +
Preference number: 6 (lower is better)
Translates to: HWKEMSTRVDWNNRG*CRNWDLRFALDSWY
Trigger: GTACCAACTATCCAAGGCGAACCTCAGATCCCAGTTGCGACACAACCCTCGGTTGTTCCAGTCCACTCTGGTGCTCATTTCCTTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 90 bp GAGGATGTTGTATGGGTTGGGAAGATGAAACCCCTGTTAAGCTACTaGAGGATGGCTGACCCTGGCTCTGCCCCTGTGCCTGAAGGAAAG +
Preference number: 6 (lower is better)
Translates to: EDVVWVGKMKPLLSY*RMADPGSAPVPEGK
Trigger: CTTTCCTTCAGGCACAGGGGCAGAGCCAGGGTCAGCCATCCTCAAGTAGCTTAACAGGGGTTTCATCTTCCCAACCCATACAACATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674810.1
CDS TCA 72 bp CTTCAGGGTTGCCAGACCGAGGTCTCCAATCTTGACTaGGCCAGTAGGGCCGGTGATAAAGATGTTGTCACA +
Preference number: 6 (lower is better)
Translates to: LQGCQTEVSNLD*ASRAGDKDVVT
Trigger: TGTGACAACATCTTTATCACCGGCCCTACTGGCTCAGTCAAGATTGGAGACCTCGGTCTGGCAACCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000447667.2
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
CDS TCA 72 bp GCTGTTGTAGCAGATGAAGCCAACGTGAGCAGAGGCTaGGTAATGCCAGCTGCCATTGTGATGGGAAGGGAT +
Preference number: 6 (lower is better)
Translates to: AVVADEANVSRG*VMPAAIVMGRD
Trigger: ATCCCTTCCCATCACAATGGCAGCTGGCATTACTCAGCCTCTGCTCACGTTGGCTTCATCTGCTACAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS TCA 72 bp GCAAACAGAAGCCACGTTGGAAGAGGGAGCAATATTTaGATCTCCTGGGTACTGTGGTGGCAGTCGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ANRSHVGRGSNI*ISWVLWWQSRW
Trigger: CCACCTCGACTGCCACCACAGTACCCAGGAGATTCAAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000537687.5
ENST00000545285.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS GCA 72 bp GAAGCAGTAGGTATGCCGGTGCTAGCAGAAGGGAGCTaGTTGATTCCTGTCTGGGAAGCACTGGATTGTTCT +
Preference number: 6 (lower is better)
Translates to: EAVGMPVLAEGS*LIPVWEALDCS
Trigger: AGAACAATCCAGTGCTTCCCAGACAGGAATCAAGCAGCTCCCTTCTGCTAGCACCGGCATACCTACTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp CAGCCCACCAGGCTGAGAAATATAACTAGACACTCCTaGTCCAGGAGAGGAAGAGGAAGATGGTGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: QPTRLRNITRHS*SRRGRGRWCRE
Trigger: CTCTCTGCACCATCTTCCTCTTCCTCTCCTGGAGCAGGAGTGTCTAGTTATATTTCTCAGCCTGGTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp CCTCCTGCCACCAGGTTTGAATGTCACCTGTTCAGATaGACAGTTAAACTTCGCACAGCCTTGACCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PPATRFECHLFR*TVKLRTALTWS
Trigger: GCTCCAGGTCAAGGCTGTGCGAAGTTTAACTGTGCATCTGAACAGGTGACATTCAAACCTGGTGGCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS CCA 72 bp GGGCACTCTCTGGCACATCTGAAGAGATACCAGGGATaGTTATGCCATTCGGCTCTGGTTTCACCAAGGTAC +
Preference number: 6 (lower is better)
Translates to: GHSLAHLKRYQG*LCHSALVSPRY
Trigger: GTACCTTGGTGAAACCAGAGCCGAATGGCATAACCATCCCTGGTATCTCTTCAGATGTGCCAGAGAGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp TGTGCCCTTTGCTTCCTCTCCTGCCTGAGAGATTCATaGCATCTCGGGCCCAATTGTCTACCAACTTGTGCA +
Preference number: 6 (lower is better)
Translates to: CALCFLSCLRDS*HLGPNCLPTCA
Trigger: TGCACAAGTTGGTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGCAAAGGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp GTGGTAGAAGCAGTAGGTATGCCGGTGCTAGCAGAAGGGAGCTGCTaGATTCCTGTCTGGGAAGCACTGGATTGTTCTACCTGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: VVEAVGMPVLAEGSC*IPVWEALDCSTCCL
Trigger: CAAACAGCAGGTAGAACAATCCAGTGCTTCCCAGACAGGAATCAAGCAGCTCCCTTCTGCTAGCACCGGCATACCTACTGCTTCTACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp TTGGTAGGCTGCCCAGTGTCTGACTTTGCCTCTGAGGCAGTAGTTTaGTGGGCACTCTCTGGCACATCTGAAGAGATACCAGGGATGGTT +
Preference number: 6 (lower is better)
Translates to: LVGCPVSDFASEAVV*WALSGTSEEIPGMV
Trigger: AACCATCCCTGGTATCTCTTCAGATGTGCCAGAGAGTGCCCACAAAACTACTGCCTCAGAGGCAAAGTCAGACACTGGGCAGCCTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp CTGCCTGAGAGATTCATGGCATCTCGGGCCCAATTGTCTACCAACTaGTGCAAGTCATCTGTGAATGTGCCCTTCCTGCTGGACGTCATG +
Preference number: 6 (lower is better)
Translates to: LPERFMASRAQLSTN*CKSSVNVPFLLDVM
Trigger: CATGACGTCCAGCAGGAAGGGCACATTCACAGATGACTTGCACAAGTTGGTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp GCCCTGGTACAGAACATCTCCAGAGGAAAGTGGAACCTCAGCAGCTaGTCCAAGGTTAGCTGGTATTCCCATGGACTGAACTGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: ALVQNISRGKWNLSS*SKVSWYSHGLNCWL
Trigger: CAACCAGCAGTTCAGTCCATGGGAATACCAGCTAACCTTGGACAAGCTGCTGAGGTTCCACTTTCCTCTGGAGATGTTCTGTACCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS TCA 72 bp ATGAAACTGTCTGTTGGCTGCTCACTCGAGATTCTGTaGAGACAGAGGATCCCTGACCACTGTCAACCGTCC +
Preference number: 6 (lower is better)
Translates to: MKLSVGCSLEIL*RQRIPDHCQPS
Trigger: GGACGGTTGACAGTGGTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGAGCAGCCAACAGACAGTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp GTTGATGTCTGTGAAAGTGAATACTGCACTGTCTGTTaGGGAGGGGCTGTCTGCTGTATTCCCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VDVCESEYCTVC*GGAVCCIPCCC
Trigger: GCAGCAGCAGGGAATACAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTATTCACTTTCACAGACATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000545285.5
ENST00000574679.1
ENST00000675631.1
CDS TCA 72 bp CTCGTAATTCATGTGCCCTTTGCTTCCTCTCCTGCCTaGGAGATTCATGGCATCTCGGGCCCAATTGTCTAC +
Preference number: 6 (lower is better)
Translates to: LVIHVPFASSPA*EIHGISGPIVY
Trigger: GTAGACAATTGGGCCCGAGATGCCATGAATCTCTCAGGCAGGAGAGGAAGCAAAGGGCACATGAATTACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp CTGAGTAATGCCAGCTGCCATTGTGATGGGAAGGGATaGGAAACCTGTCTGAGCCGTAGACACATGAGGAGT +
Preference number: 6 (lower is better)
Translates to: LSNASCHCDGKG*ETCLSRRHMRS
Trigger: ACTCCTCATGTGTCTACGGCTCAGACAGGTTTCTCATCCCTTCCCATCACAATGGCAGCTGGCATTACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS GCA 72 bp ACTCCTGATGTAGTAGTGCTGACTGGGGTAGAAACTTaGCCAGGTGTGACCACTGGTGTAACTGGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: TPDVVVLTGVET*PGVTTGVTGKA
Trigger: TGCTTTGCCAGTTACACCAGTGGTCACACCTGGGCAAGTTTCTACCCCAGTCAGCACTACTACATCAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp TTCATGGCATCTCGGGCCCAATTGTCTACCAACTTGTaGAAGTCATCTGTGAATGTGCCCTTCCTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: FMASRAQLSTNL*KSSVNVPFLLD
Trigger: GTCCAGCAGGAAGGGCACATTCACAGATGACTTGCACAAGTTGGTAGACAATTGGGCCCGAGATGCCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp ATGTCTCTAGGTCTAAGTGGTCCGCAGGTTGGAGCCTaGGGGGTTGCTGATGGATTTCTGCAAATTGCTGAT +
Preference number: 6 (lower is better)
Translates to: MSLGLSGPQVGA*GVADGFLQIAD
Trigger: ATCAGCAATTTGCAGAAATCCATCAGCAACCCCCCAGGCTCCAACCTGCGGACCACTTAGACCTAGAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
CDS CCA 72 bp CCAGATTCTTCAGTGTACAACACACAGGCTGTGTTCTaGTCAGCTAGTCTCCCAACCCGCCTTAACAGGCTT +
Preference number: 6 (lower is better)
Translates to: PDSSVYNTQAVF*SASLPTRLNRL
Trigger: AAGCCTGTTAAGGCGGGTTGGGAGACTAGCTGACCAGAACACAGCCTGTGTGTTGTACACTGAAGAATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542424.1
CDS CAA 72 bp TGCCCAGTGTCTGACTTTGCCTCTGAGGCAGTAGTTTaGTGGGCACTCTCTGGCACATCTGAAGAGATACCA +
Preference number: 6 (lower is better)
Translates to: CPVSDFASEAVV*WALSGTSEEIP
Trigger: TGGTATCTCTTCAGATGTGCCAGAGAGTGCCCACAAAACTACTGCCTCAGAGGCAAAGTCAGACACTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp TGCAAACAGAAGCCACGTTGGAAGAGGGAGCAATATTaGAATCTCCTGGGTACTGTGGTGGCAGTCGAGGTG +
Preference number: 6 (lower is better)
Translates to: CKQKPRWKREQY*NLLGTVVAVEV
Trigger: CACCTCGACTGCCACCACAGTACCCAGGAGATTCAAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000537687.5
ENST00000545285.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 90 bp ATGGGAGGGGATAGGACTGTAGAATGGATGCAAACAGAAGCCACGTaGGAAGAGGGAGCAATATTTGAATCTCCTGGGTACTGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: MGGDRTVEWMQTEAT*EEGAIFESPGYCGG
Trigger: GCCACCACAGTACCCAGGAGATTCAAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTGCATCCATTCTACAGTCCTATCCCCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000545285.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS TCA 72 bp CTGCTCACTCGAGATTCTGTGAAGACAGAGGATCCCTaGCCACTGTCAACCGTCCCATCAGATAACACAGAT +
Preference number: 6 (lower is better)
Translates to: LLTRDSVKTEDP*PLSTVPSDNTD
Trigger: ATCTGTGTTATCTGATGGGACGGTTGACAGTGGTCAGGGATCCTCTGTCTTCACAGAATCTCGAGTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp GAGAAACGACCCACTTTGTTTGCTGTAGTTGTCACCTaGAAACGTCCAACCTTGGTAGGCTGCCCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: EKRPTLFAVVVT*KRPTLVGCPVS
Trigger: AGACACTGGGCAGCCTACCAAGGTTGGACGTTTTCAGGTGACAACTACAGCAAACAAAGTGGGTCGTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp CAGAAAGGCTTGGTACTGAAATGGCACCATCACTGGTaGAGGCTGAATAGAGGTTGTCACTGGAGGGAGATG +
Preference number: 6 (lower is better)
Translates to: QKGLVLKWHHHW*RLNRGCHWREM
Trigger: CATCTCCCTCCAGTGACAACCTCTATTCAGCCTTCACCAGTGATGGTGCCATTTCAGTACCAAGCCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537603.1
ENST00000537687.5
ENST00000542424.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp GTTGATGTCTGTGAAAGTGAATACTGCACTGTCTGTTaGGGAGGGGCTGTCTGCTGTATTCCCTGCTGCACA +
Preference number: 6 (lower is better)
Translates to: VDVCESEYCTVC*GGAVCCIPCCT
Trigger: TGTGCAGCAGGGAATACAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTATTCACTTTCACAGACATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676347.1
CDS GCA 72 bp CTGAGAGGCAGAGTGCATAGGCAGGACACTCTCCAATaGTTTAGAAAGCTTTTCGGCAAAAGTTTCCTCGGG +
Preference number: 6 (lower is better)
Translates to: LRGRVHRQDTLQ*FRKLFGKSFLG
Trigger: CCCGAGGAAACTTTTGCCGAAAAGCTTTCTAAAGCATTGGAGAGTGTCCTGCCTATGCACTCTGCCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340908.9
CDS GCA 72 bp CACCCGGGCCTGGTAATGTACCCCAGCTACATACACTaGTTCCTGAGGAATAAAATAGTGAGCTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: HPGLVMYPSYIH*FLRNKIVSFFW
Trigger: CCAGAAGAAGCTCACTATTTTATTCCTCAGGAAGCAGTGTATGTAGCTGGGGTACATTACCAGGCCCGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS GCA 72 bp GCAAGTACTTGTGGTAGAAGTCAGGAGTTTGCTTGGTaGAACAGCAGTAGTTGGGATGCCTGGTGTGACAGT +
Preference number: 6 (lower is better)
Translates to: ASTCGRSQEFAW*NSSSWDAWCDS
Trigger: ACTGTCACACCAGGCATCCCAACTACTGCTGTTGCACCAAGCAAACTCCTGACTTCTACCACAAGTACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp TCTCTGGCACATCTGAAGAGATACCAGGGATGGTTATaGCATTCGGCTCTGGTTTCACCAAGGTACTCTCTG +
Preference number: 6 (lower is better)
Translates to: SLAHLKRYQGWL*HSALVSPRYSL
Trigger: CAGAGAGTACCTTGGTGAAACCAGAGCCGAATGGCATAACCATCCCTGGTATCTCTTCAGATGTGCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp TTTCCTTCACTTCAGGAATTGCTACTTTGTCAAAACTaGCTGGCTTCACCCCACTGGTCACGCGACGGTAGA +
Preference number: 6 (lower is better)
Translates to: FPSLQELLLCQN*LASPHWSRDGR
Trigger: TCTACCGTCGCGTGACCAGTGGGGTGAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGAAGTGAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540360.5
CDS CCA 72 bp CCTGGGACTGTGCCTGTAGAATGTGCCTGTTCATGTTaGGAACCATATGAAACTGTCTGTTGGCTGCTCACT +
Preference number: 6 (lower is better)
Translates to: PGTVPVECACSC*EPYETVCWLLT
Trigger: AGTGAGCAGCCAACAGACAGTTTCATATGGTTCCCAACATGAACAGGCACATTCTACAGGCACAGTCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp CTGAGACTGTGCTTGGACAGTAGAAGGTATATGCCCTaGGACTGTGCCTGTAGAATGTGCCTGTTCATGTTG +
Preference number: 6 (lower is better)
Translates to: LRLCLDSRRYMP*DCACRMCLFML
Trigger: CAACATGAACAGGCACATTCTACAGGCACAGTCCCAGGGCATATACCTTCTACTGTCCAAGCACAGTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp GCAACAGGCTGTACCAAGGGTGGGATACTAGGTACTTaGGGTAATAAAGGTGTAGAAGTAGGTCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: ATGCTKGGILGT*GNKGVEVGPAA
Trigger: AGCAGCAGGACCTACTTCTACACCTTTATTACCCCAAGTACCTAGTATCCCACCCTTGGTACAGCCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp GGTGGTAAGCAAGTACTTGTGGTAGAAGTCAGGAGTTaGCTTGGTGCAACAGCAGTAGTTGGGATGCCTGGT +
Preference number: 6 (lower is better)
Translates to: GGKQVLVVEVRS*LGATAVVGMPG
Trigger: ACCAGGCATCCCAACTACTGCTGTTGCACCAAGCAAACTCCTGACTTCTACCACAAGTACTTGCTTACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp TTCCCCAAGGAACTGCTTCGACTAGATTTGCTGCCTTaGCTTTTAGTGGGTCGTCGTCTTCTCCCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: FPKELLRLDLLP*LLVGRRLLPER
Trigger: CCTTTCAGGGAGAAGACGACGACCCACTAAAAGCAAAGGCAGCAAATCTAGTCGAAGCAGTTCCTTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000542424.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp CAGAACATCTCCAGAGGAAAGTGGAACCTCAGCAGCTaGTCCAAGGTTAGCTGGTATTCCCATGGACTGAAC +
Preference number: 6 (lower is better)
Translates to: QNISRGKWNLSS*SKVSWYSHGLN
Trigger: GTTCAGTCCATGGGAATACCAGCTAACCTTGGACAAGCTGCTGAGGTTCCACTTTCCTCTGGAGATGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000535698.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS TCA 72 bp GATCCCGGACCCAATCCAGAATCTAATCTTAGATTCTaGAGGTGTCCTACCAGGAAAGCCTGTCCAGATGGA +
Preference number: 6 (lower is better)
Translates to: DPGPNPESNLRF*RCPTRKACPDG
Trigger: TCCATCTGGACAGGCTTTCCTGGTAGGACACCTTCAGAATCTAAGATTAGATTCTGGATTGGGTCCGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS TCA 72 bp CAGAGGCATGCTGAGCTCCAGATGAGCTGTGTTCACTaGACAGAGACCGCAGCTTTTCTTCTAGAGTCTTTA +
Preference number: 6 (lower is better)
Translates to: QRHAELQMSCVH*TETAAFLLESL
Trigger: TAAAGACTCTAGAAGAAAAGCTGCGGTCTCTGTTCAGTGAACACAGCTCATCTGGAGCTCAGCATGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp GTTGATGTCTGTGAAAGTGAATACTGCACTGTCTGTTaGGGAGGGGCTGTCTGCTGTATTCCCTGCACACTT +
Preference number: 6 (lower is better)
Translates to: VDVCESEYCTVC*GGAVCCIPCTL
Trigger: AAGTGTGCAGGGAATACAGCAGACAGCCCCTCCTCAACAGACAGTGCAGTATTCACTTTCACAGACATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535698.1
CDS CAA 90 bp AAATTGGTTGGTGGTAAGCAAGTACTTGTGGTAGAAGTCAGGAGTTaGCTTGGTGCAACAGCAGTAGTTGGGATGCCTGGTGTGACAGTG +
Preference number: 6 (lower is better)
Translates to: KLVGGKQVLVVEVRS*LGATAVVGMPGVTV
Trigger: CACTGTCACACCAGGCATCCCAACTACTGCTGTTGCACCAAGCAAACTCCTGACTTCTACCACAAGTACTTGCTTACCACCAACCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp TGCCATTCGGCTCTGGTTTCACCAAGGTACTCTCTGGACTACTACTaGATAGCACTGAGGACTCTGAGGTGCTGGATTCAAAATGAACAG +
Preference number: 6 (lower is better)
Translates to: CHSALVSPRYSLDYY*IALRTLRCWIQNEQ
Trigger: CTGTTCATTTTGAATCCAGCACCTCAGAGTCCTCAGTGCTATCAAGTAGTAGTCCAGAGAGTACCTTGGTGAAACCAGAGCCGAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp TTTTTCACCATCTTCCTCAGAAATCGGGTCCTCCTGCCACCAGGTTaGAATGTCACCTGTTCAGATGCACAGTTAAACTTCGCACAGCCT +
Preference number: 6 (lower is better)
Translates to: FFTIFLRNRVLLPPG*NVTCSDAQLNFAQP
Trigger: AGGCTGTGCGAAGTTTAACTGTGCATCTGAACAGGTGACATTCAAACCTGGTGGCAGGAGGACCCGATTTCTGAGGAAGATGGTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS CAA 90 bp GCTGTGTTCTGGTCAGCTAGTCTCCCAACCCGCCTTAACAGGCTTTaGTCCCAGGTATGGCAACATCTCCATTTTATTGTTTTTGGACGA +
Preference number: 6 (lower is better)
Translates to: AVFWSASLPTRLNRL*SQVWQHLHFIVFGR
Trigger: TCGTCCAAAAACAATAAAATGGAGATGTTGCCATACCTGGGACAAAAGCCTGTTAAGGCGGGTTGGGAGACTAGCTGACCAGAACACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542424.1
CDS CAA 90 bp GTAGTTCTTCCTTCATGCCTTCCACTGGAAGATGGGACGTTCTCATaGCCATCACTCATACCTGAAGCAACATCTGAATGTGCACTGTCT +
Preference number: 6 (lower is better)
Translates to: VVLPSCLPLEDGTFS*PSLIPEATSECALS
Trigger: AGACAGTGCACATTCAGATGTTGCTTCAGGTATGAGTGATGGCAATGAGAACGTCCCATCTTCCAGTGGAAGGCATGAAGGAAGAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000534872.1
ENST00000535572.5
ENST00000537687.5
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp TCGTGGCGTAAGACGTTAAGCAGCAGCTTAGTTGTTTCTATCACCTaGACTCAGATGTGTGTTACGGATTCTCTGCGGCAAAAGAGAGAC +
Preference number: 6 (lower is better)
Translates to: SWRKTLSSSLVVSIT*TQMCVTDSLRQKRD
Trigger: GTCTCTCTTTTGCCGCAGAGAATCCGTAACACACATCTGAGTCAAGGTGATAGAAACAACTAAGCTGCTGCTTAACGTCTTACGCCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537603.1
CDS TCA 72 bp GCCTGTAGAATGTGCCTGTTCATGTTGGGAACCATATaGAACTGTCTGTTGGCTGCTCACTCGAGATTCTGT +
Preference number: 6 (lower is better)
Translates to: ACRMCLFMLGTI*NCLLAAHSRFC
Trigger: ACAGAATCTCGAGTGAGCAGCCAACAGACAGTTTCATATGGTTCCCAACATGAACAGGCACATTCTACAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp CTCTTCAGTGGGCACTGTAACCTCAGACTGAATTACTaGTGTGGAAATGTCATTAGGAGGGCTGCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: LFSGHCNLRLNY*CGNVIRRAACC
Trigger: GCAACAAGCAGCCCTCCTAATGACATTTCCACATCAGTAATTCAGTCTGAGGTTACAGTGCCCACTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp CTTCATGCCTTCCACTGGAAGATGGGACGTTCTCATTaGCATCACTCATACCTGAAGCAACATCTGAATGTG +
Preference number: 6 (lower is better)
Translates to: LHAFHWKMGRSH*HHSYLKQHLNV
Trigger: CACATTCAGATGTTGCTTCAGGTATGAGTGATGGCAATGAGAACGTCCCATCTTCCAGTGGAAGGCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000534872.1
ENST00000535572.5
ENST00000537687.5
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp TGGAAATGTTGGTCCTGTATGACTAAAGTTTGGAGGTaGTGTGTTGGGTCCTTCTGTCATTTGGGCACGTCT +
Preference number: 6 (lower is better)
Translates to: WKCWSCMTKVWR*CVGSFCHLGTS
Trigger: AGACGTGCCCAAATGACAGAAGGACCCAACACAGCACCTCCAAACTTTAGTCATACAGGACCAACATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp CTGATGGATTTCTGCAAATTGCTGATGTTGAAATTCTaGAAGGAGGCAGTTCCCACAGGTTGGAACTGGCCA +
Preference number: 6 (lower is better)
Translates to: LMDFCKLLMLKF*KEAVPTGWNWP
Trigger: TGGCCAGTTCCAACCTGTGGGAACTGCCTCCTTGCAGAATTTCAACATCAGCAATTTGCAGAAATCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540885.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp GCCTGTTCATGTTGGGAACCATATGAAACTGTCTGTTaGCTGCTCACTCGAGATTCTGTGAAGACAGAGGAT +
Preference number: 6 (lower is better)
Translates to: ACSCWEPYETVC*LLTRDSVKTED
Trigger: ATCCTCTGTCTTCACAGAATCTCGAGTGAGCAGCCAACAGACAGTTTCATATGGTTCCCAACATGAACAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp GGTATCTGTTTCATAGGACTTGACAGTACTGATGAGTaGTATGGAATGCCCTCATACTGTTCTGCCACCCGG +
Preference number: 6 (lower is better)
Translates to: GICFIGLDSTDE*YGMPSYCSATR
Trigger: CCGGGTGGCAGAACAGTATGAGGGCATTCCATACAACTCATCAGTACTGTCAAGTCCTATGAAACAGATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS CAA 72 bp ATCTTCCTCAGAAATCGGGTCCTCCTGCCACCAGGTTaGAATGTCACCTGTTCAGATGCACAGTTAAACTTC +
Preference number: 6 (lower is better)
Translates to: IFLRNRVLLPPG*NVTCSDAQLNF
Trigger: GAAGTTTAACTGTGCATCTGAACAGGTGACATTCAAACCTGGTGGCAGGAGGACCCGATTTCTGAGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530271.6
CDS CAA 72 bp TGGTCAGCTAGTCTCCCAACCCGCCTTAACAGGCTTTaGTCCCAGGTATGGCAACATCTCCATTTTATTGTT +
Preference number: 6 (lower is better)
Translates to: WSASLPTRLNRL*SQVWQHLHFIV
Trigger: AACAATAAAATGGAGATGTTGCCATACCTGGGACAAAAGCCTGTTAAGGCGGGTTGGGAGACTAGCTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542424.1
CDS CAA 90 bp GTGACCACTGGTGTAACTGGCAAAGCAACTGTTCCTAGTGGTAAATaGGTTGGTGGTAAGCAAGTACTTGTGGTAGAAGTCAGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: VTTGVTGKATVPSGK*VGGKQVLVVEVRSL
Trigger: CAAACTCCTGACTTCTACCACAAGTACTTGCTTACCACCAACCAATTTACCACTAGGAACAGTTGCTTTGCCAGTTACACCAGTGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp TCAGCTAAAGTAGGAGTAGAAGTACTGCTGCTAAGCTaGATGCACAGCTGTGAAGCTGTGCTTGGGAATGAA +
Preference number: 6 (lower is better)
Translates to: SAKVGVEVLLLS*MHSCEAVLGNE
Trigger: TTCATTCCCAAGCACAGCTTCACAGCTGTGCATTCAGCTTAGCAGCAGTACTTCTACTCCTACTTTAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp ACTGTGATCATCTCTGGACTAAGTGTTCTTCTCAATTaGGCATCAAGATCCTCTAGAGGTTGCTGGGACTGG +
Preference number: 6 (lower is better)
Translates to: TVIISGLSVLLN*ASRSSRGCWDW
Trigger: CCAGTCCCAGCAACCTCTAGAGGATCTTGATGCTCAATTGAGAAGAACACTTAGTCCAGAGATGATCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp GTGAAATTTCAAACGTGTAGCATCTGTACTGATAGGTaGAGAAATACTAGAGAGGGGAGATCCCGGACCCAA +
Preference number: 6 (lower is better)
Translates to: VKFQTCSICTDR*RNTREGRSRTQ
Trigger: TTGGGTCCGGGATCTCCCCTCTCTAGTATTTCTGCACCTATCAGTACAGATGCTACACGTTTGAAATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS CCA 72 bp TACTACTGGAAATGTTGGTCCTGTATGACTAAAGTTTaGAGGTGCTGTGTTGGGTCCTTCTGTCATTTGGGC +
Preference number: 6 (lower is better)
Translates to: YYWKCWSCMTKV*RCCVGSFCHLG
Trigger: GCCCAAATGACAGAAGGACCCAACACAGCACCTCCAAACTTTAGTCATACAGGACCAACATTTCCAGTAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp TGGGGTAATAAAGGTGTAGAAGTAGGTCCTGCTGCTTaGGGAAGAATAGGAGTAGAAGCTATCACTGATGGA +
Preference number: 6 (lower is better)
Translates to: WGNKGVEVGPAA*GRIGVEAITDG
Trigger: TCCATCAGTGATAGCTTCTACTCCTATTCTTCCCCAAGCAGCAGGACCTACTTCTACACCTTTATTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp CCTTCAATAATTTCCTTCACTTCAGGAATTGCTACTTaGTCAAAACTGGCTGGCTTCACCCCACTGGTCACG +
Preference number: 6 (lower is better)
Translates to: PSIISFTSGIAT*SKLAGFTPLVT
Trigger: CGTGACCAGTGGGGTGAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGAAGTGAAGGAAATTATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000540360.5
CDS CAA 72 bp GATAGGACTGTAGAATGGATGCAAACAGAAGCCACGTaGGAAGAGGGAGCAATATTTGAATCTCCTGGGTAC +
Preference number: 6 (lower is better)
Translates to: DRTVEWMQTEAT*EEGAIFESPGY
Trigger: GTACCCAGGAGATTCAAATATTGCTCCCTCTTCCAACGTGGCTTCTGTTTGCATCCATTCTACAGTCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000530271.6
ENST00000537687.5
ENST00000545285.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
CDS CAA 72 bp ACTGGCTGGCTTCACCCCCTCATTTATACAATCCTTTaGAGGGCAGCAGCAGCAATGAGAATTTATGATGAC +
Preference number: 6 (lower is better)
Translates to: TGWLHPLIYTIL*RAAAAMRIYDD
Trigger: GTCATCATAAATTCTCATTGCTGCTGCTGCCCTCAAAAGGATTGTATAAATGAGGGGGTGAAGCCAGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS CAA 90 bp ATAGCACTGAGGACTCTGAGGTGCTGGATTCAAAATGAACAGACTTaGCATCTTCTGACTTATTTTTACCCTCTTTCTGGGCACCGTCTG +
Preference number: 6 (lower is better)
Translates to: IALRTLRCWIQNEQT*HLLTYFYPLSGHRL
Trigger: CAGACGGTGCCCAGAAAGAGGGTAAAAATAAGTCAGAAGATGCAAAGTCTGTTCATTTTGAATCCAGCACCTCAGAGTCCTCAGTGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp AGATGGTTCAAACATAGGATGGACCTGTATCTCACATaGCTCTCCAGTTACTCTACTGGCTGTAGTACCCAA +
Preference number: 6 (lower is better)
Translates to: RWFKHRMDLYLT*LSSYSTGCSTQ
Trigger: TTGGGTACTACAGCCAGTAGAGTAACTGGAGAGTCATGTGAGATACAGGTCCATCCTATGTTTGAACCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
CDS TCA 72 bp AAACAGAAGAAAAGTGGGGATTCTTGTAACACTGTCTaGGGCAGATGGATAAAGGGCATTGAGACGTCAGAG +
Preference number: 6 (lower is better)
Translates to: KQKKSGDSCNTV*GRWIKGIETSE
Trigger: CTCTGACGTCTCAATGCCCTTTATCCATCTGCCTCAGACAGTGTTACAAGAATCCCCACTTTTCTTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340908.9
ENST00000530271.6
ENST00000537687.5
ENST00000574679.1
ENST00000674810.1
CDS TCA 72 bp AAGAAAGGAGGTACTACTGGAAATGTTGGTCCTGTATaGCTAAAGTTTGGAGGTGCTGTGTTGGGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: KKGGTTGNVGPV*LKFGGAVLGPS
Trigger: AGAAGGACCCAACACAGCACCTCCAAACTTTAGTCATACAGGACCAACATTTCCAGTAGTACCTCCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS GCA 72 bp AAACCCACTGACAGTGAAAACCTAAGCTGTCAATGCTaGTCAGGCTGTAATTTTAGCTGGCTAGAATCGTCA +
Preference number: 6 (lower is better)
Translates to: KPTDSENLSCQC*SGCNFSWLESS
Trigger: TGACGATTCTAGCCAGCTAAAATTACAGCCTGAGCAGCATTGACAGCTTAGGTTTTCACTGTCAGTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674810.1
CDS CCA 72 bp CACTGTCAACCGTCCCATCAGATAACACAGATATACTaGGTTGCTGGTACTGTAGTTGTTGATGTTGATCTG +
Preference number: 6 (lower is better)
Translates to: HCQPSHQITQIY*VAGTVVVDVDL
Trigger: CAGATCAACATCAACAACTACAGTACCAGCAACCCAGTATATCTGTGTTATCTGATGGGACGGTTGACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CCA 72 bp AATGCCTATTTGCTGTGGCATGGAAGACGCAGGAATTaGTTGTTTGAACTCTCCTTCCAATTTCTGAGAACC +
Preference number: 6 (lower is better)
Translates to: NAYLLWHGRRRN*LFELSFQFLRT
Trigger: GGTTCTCAGAAATTGGAAGGAGAGTTCAAACAACCAATTCCTGCGTCTTCCATGCCACAGCAAATAGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000534872.1
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp GGTGTAACTGGCAAAGCAACTGTTCCTAGTGGTAAATaGGTTGGTGGTAAGCAAGTACTTGTGGTAGAAGTC +
Preference number: 6 (lower is better)
Translates to: GVTGKATVPSGK*VGGKQVLVVEV
Trigger: GACTTCTACCACAAGTACTTGCTTACCACCAACCAATTTACCACTAGGAACAGTTGCTTTGCCAGTTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp CTTCTCTTTCTTTGGTATCACAGCAGGAAGAACAGCTaGTTCCAAATCCATAAAAGGAGGAGATGCCACTGG +
Preference number: 6 (lower is better)
Translates to: LLFLWYHSRKNS*FQIHKRRRCHW
Trigger: CCAGTGGCATCTCCTCCTTTTATGGATTTGGAACAAGCTGTTCTTCCTGCTGTGATACCAAAGAAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp GATGTGAAGGCTCTGACAGTTCAGGCTTCTCTTTCTTaGGTATCACAGCAGGAAGAACAGCTTGTTCCAAAT +
Preference number: 6 (lower is better)
Translates to: DVKALTVQASLS*VSQQEEQLVPN
Trigger: ATTTGGAACAAGCTGTTCTTCCTGCTGTGATACCAAAGAAAGAGAAGCCTGAACTGTCAGAGCCTTCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS TCA 72 bp TGCAGGAGCAACCTGAGAGACTCCCTGAGTACTCTGTaGATCGAAAAGATAACTCAAATCTCGGTAGTAATA +
Preference number: 6 (lower is better)
Translates to: CRSNLRDSLSTL*IEKITQISVVI
Trigger: TATTACTACCGAGATTTGAGTTATCTTTTCGATTCACAGAGTACTCAGGGAGTCTCTCAGGTTGCTCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545055.1
CDS CCA 72 bp GACTACTACTTGATAGCACTGAGGACTCTGAGGTGCTaGATTCAAAATGAACAGACTTTGCATCTTCTGACT +
Preference number: 6 (lower is better)
Translates to: DYYLIALRTLRC*IQNEQTLHLLT
Trigger: AGTCAGAAGATGCAAAGTCTGTTCATTTTGAATCCAGCACCTCAGAGTCCTCAGTGCTATCAAGTAGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp ACACTAGCCATGCTTCCCCAACTCTCAGACAGGAATTaGCTCTACTCAGCCAACAACAGATTTATTCTAGAT +
Preference number: 6 (lower is better)
Translates to: TLAMLPQLSDRN*LYSANNRFILD
Trigger: ATCTAGAATAAATCTGTTGTTGGCTGAGTAGAGCAAATTCCTGTCTGAGAGTTGGGGAAGCATGGCTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS TCA 72 bp TTGGCAATATGTGGAGACATTTCTGGTTGTCACAACTaGGGGAGATTGCTGCTACTAGTATTTAGGAGGTAT +
Preference number: 6 (lower is better)
Translates to: LAICGDISGCHN*GRLLLLVFRRY
Trigger: ATACCTCCTAAATACTAGTAGCAGCAATCTCCCTCAGTTGTGACAACCAGAAATGTCTCCACATATTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674810.1
CDS CAA 90 bp TCTTGTTTAACACTAGCCATGCTTCCCCAACTCTCAGACAGGAATTaGCTCTACTCAGCCAACAACAGATTTATTCTAGATGGACAAAAC +
Preference number: 6 (lower is better)
Translates to: SCLTLAMLPQLSDRN*LYSANNRFILDGQN
Trigger: GTTTTGTCCATCTAGAATAAATCTGTTGTTGGCTGAGTAGAGCAAATTCCTGTCTGAGAGTTGGGGAAGCATGGCTAGTGTTAAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS CCA 72 bp TTTGCTCTACTCAGCCAACAACAGATTTATTCTAGATaGACAAAACTGCATGCCCAACAGCAGGAAAACTAT +
Preference number: 6 (lower is better)
Translates to: FALLSQQQIYSR*TKLHAQQQENY
Trigger: ATAGTTTTCCTGCTGTTGGGCATGCAGTTTTGTCCATCTAGAATAAATCTGTTGTTGGCTGAGTAGAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS CCA 72 bp TTTCCTTCACTTCAGGAATTGCTACTTTGTCAAAACTaGCTGGCTTCACCCCCTCATTTATACAATCCTTTT +
Preference number: 6 (lower is better)
Translates to: FPSLQELLLCQN*LASPPHLYNPF
Trigger: AAAAGGATTGTATAAATGAGGGGGTGAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGAAGTGAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675631.1
CDS CAA 72 bp TCATTGTTCACCATAATTGTTGCTATCTCCTCGGGGTaGTCACCATCTAGGTCAAATTTGAATGTAACCATT +
Preference number: 6 (lower is better)
Translates to: SLFTIIVAISSG*SPSRSNLNVTI
Trigger: AATGGTTACATTCAAATTTGACCTAGATGGTGACAACCCCGAGGAGATAGCAACAATTATGGTGAACAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp AGAATAAAGTCATTGTTCACCATAATTGTTGCTATCTCCTCGGGGTaGTCACCATCTAGGTCAAATTTGAATGTAACCATTTTCCTATTA +
Preference number: 6 (lower is better)
Translates to: RIKSLFTIIVAISSG*SPSRSNLNVTIFLL
Trigger: TAATAGGAAAATGGTTACATTCAAATTTGACCTAGATGGTGACAACCCCGAGGAGATAGCAACAATTATGGTGAACAATGACTTTATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000535572.5
ENST00000537687.5
ENST00000545055.1
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 90 bp TTTGTATTCCTAAATAATGCTGGGTCAACCATACATTACATACACTaGCATTTTCACTACTGGTTGAAAATAACGTGCATAGAAGTCGTG +
Preference number: 6 (lower is better)
Translates to: FVFLNNAGSTIHYIH*HFHYWLKITCIEVV
Trigger: CACGACTTCTATGCACGTTATTTTCAACCAGTAGTGAAAATGCAAGTGTATGTAATGTATGGTTGACCCAGCATTATTTAGGAATACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674810.1
CDS TCA 72 bp AGCATTTCATCAGCTTTTTCAATAATTTCTCGCACTTaGTCCACAAACGACTCTCTCTCTATTGCTAGAATA +
Preference number: 6 (lower is better)
Translates to: SISSAFSIISRT*STNDSLSIARI
Trigger: TATTCTAGCAATAGAGAGAGAGTCGTTTGTGGATCAAGTGCGAGAAATTATTGAAAAAGCTGATGAAATGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000315939.11
ENST00000340908.9
ENST00000530271.6
ENST00000534872.1
ENST00000535572.5
ENST00000537687.5
ENST00000674810.1
ENST00000675236.1
ENST00000675631.1
ENST00000676347.1
CDS CAA 72 bp ACCATACATTACATACACTTGCATTTTCACTACTGGTaGAAAATAACGTGCATAGAAGTCGTGATTGTGAAG +
Preference number: 6 (lower is better)
Translates to: TIHYIHLHFHYW*KITCIEVVIVK
Trigger: CTTCACAATCACGACTTCTATGCACGTTATTTTCAACCAGTAGTGAAAATGCAAGTGTATGTAATGTATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674810.1
CDS CAA 72 bp CTAAATAATGCTGGGTCAACCATACATTACATACACTaGCATTTTCACTACTGGTTGAAAATAACGTGCATA +
Preference number: 6 (lower is better)
Translates to: LNNAGSTIHYIH*HFHYWLKITCI
Trigger: TATGCACGTTATTTTCAACCAGTAGTGAAAATGCAAGTGTATGTAATGTATGGTTGACCCAGCATTATTTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674810.1