RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WIPI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157954

Ensembl transcript IDs: ENST00000288828.9, ENST00000382384.6, ENST00000401525.7, ENST00000404704.7, ENST00000465102.5, ENST00000466014.5, ENST00000471851.1, ENST00000475309.5, ENST00000479690.1, ENST00000480238.5, ENST00000484262.1, ENST00000485854.5, ENST00000488359.1, ENST00000496867.5

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACAGGGCTTCCCGTGGTCTGCAGGGAACGCACCTAGCCAGCCCTaGCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGAC +
Preference number: 1 (lower is better)
Translates to: AQGFPWSAGNAPSQP*QGHPRGSVGRGSQD
Trigger: GTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTTCCCTGCAGACCACGGGAAGCCCTGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp CTGGCCTTGCACCACAAGACGCAGGCGTGGGTCAAGGCTGCGTGCTaGCGCGGCCCTTCTCATCCCTGCTCAAGCATAGCCCACTCTGGC +
Preference number: 1 (lower is better)
Translates to: LALHHKTQAWVKAAC*RGPSHPCSSIAHSG
Trigger: GCCAGAGTGGGCTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp AGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTaGAACTGCCTCATCTTACAGTGCGGGAAGCCGAGGCTGAGCGAG +
Preference number: 1 (lower is better)
Translates to: RGSVGRGSQDVRGLL*NCLILQCGKPRLSE
Trigger: CTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp TGTTGCTGTCTCCCGCTACGACCTCTCACACAGGTAGGAAGCCCCTaGGGACAGCGGGGCCAGCGAAAGGACAGCTCAGACGGCCACCAC +
Preference number: 1 (lower is better)
Translates to: CCCLPLRPLTQVGSP*GQRGQRKDSSDGHH
Trigger: GTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCCGCAGGGGCTTCCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp CCTCTGGCCTTGCACCACAAGACGCAGGCGTGGGTCAAGGCTGCGTaGTGCCGCGGCCCTTCTCATCCCTGCTCAAGCATAGCCCACTCT +
Preference number: 1 (lower is better)
Translates to: PLALHHKTQAWVKAA*CRGPSHPCSSIAHS
Trigger: AGAGTGGGCTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp GGAGATGGAGTGCACGGTCAGGTTCTAGAGAGAGCCCTCTGGCCTTaGACCACAAGACGCAGGCGTGGGTCAAGGCTGCGTGCTGCCGCG +
Preference number: 1 (lower is better)
Translates to: GDGVHGQVLERALWP*TTRRRRGSRLRAAA
Trigger: CGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCACTCCATCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp AGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAACTaGCTCATCTTACAGTGCGGGAAGCCGAGGCTGAGCGAGGAAGAC +
Preference number: 1 (lower is better)
Translates to: SVGRGSQDVRGLLCN*LILQCGKPRLSEED
Trigger: GTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 90 bp CACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTaGGAGGAAGCCGGTGTAGGTGAGTCGGACTCCAGCGTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: HLCLMQMLCVPHTSG*EEAGVGESDSSVPC
Trigger: GCAGGGGACGCTGGAGTCCGACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 90 bp GTTCTAACGGGCAACTCAGCGGCCTCCCTCTGTCCCCGTCACTCCTaGGCATGTCTGAGGCCGCCAGTGAGGCTGGGACTCATAGGTTCG +
Preference number: 1 (lower is better)
Translates to: VLTGNSAASLCPRHS*ACLRPPVRLGLIGS
Trigger: CGAACCTATGAGTCCCAGCCTCACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAGTTGCCCGTTAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp CGTTTATTGGGTGCCCACCGCTGGCTGGGCACCGAGCTGGGCGTTTaGAGGACACGCAGTCACACAACACCTCACAACAGCCCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: RLLGAHRWLGTELGV*RTRSHTTPHNSPVR
Trigger: CCTCACAGGGCTGTTGTGAGGTGTTGTGTGACTGCGTGTCCTGCAAACGCCCAGCTCGGTGCCCAGCCAGCGGTGGGCACCCAATAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 90 bp CTCCCAGGAGATGGAGTGCACGGTCAGGTTCTAGAGAGAGCCCTCTaGCCTTGCACCACAAGACGCAGGCGTGGGTCAAGGCTGCGTGCT +
Preference number: 1 (lower is better)
Translates to: LPGDGVHGQVLERAL*PCTTRRRRGSRLRA
Trigger: AGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCACTCCATCTCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 90 bp GTTGTGTGTGCCGCACACCAGCGGCTGGGAGGAAGCCGGTGTAGGTaGGTCGGACTCCAGCGTCCCCTGCATTTAGTTTGCCGTAAAGCC +
Preference number: 1 (lower is better)
Translates to: VVCAAHQRLGGSRCR*VGLQRPLHLVCRKA
Trigger: GGCTTTACGGCAAACTAAATGCAGGGGACGCTGGAGTCCGACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 90 bp CATAGCCCACTCTGGCCTCGGCGGTCCCCACTGTCTCAGCCTGCGTaGCCGGGATCCCATTTCATCAAAGGTCCAGGACAGACAAGCAGG +
Preference number: 1 (lower is better)
Translates to: HSPLWPRRSPLSQPA*PGSHFIKGPGQTSR
Trigger: CCTGCTTGTCTGTCCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAGAGTGGGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 90 bp ACCCAACGGCAGGTGGCTGGAAAGTGGCTTCTAGCTCCCCTATGCTaGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGC +
Preference number: 1 (lower is better)
Translates to: TQRQVAGKWLLAPLC*LGTFMHAKRGGFAG
Trigger: GCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR TCA 90 bp GGACAGCGGGGCCAGCGAAAGGACAGCTCAGACGGCCACCACACTTaGGTTCTGTGCTTTCCTGGGCATGGGAGGAGCTACAAACTTTAC +
Preference number: 1 (lower is better)
Translates to: GQRGQRKDSSDGHHT*VLCFPGHGRSYKLY
Trigger: GTAAAGTTTGTAGCTCCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp TCACAGGACGTCCGAGGCCTCCTCTGCAACTGCCTCATCTTACAGTaGGGGAAGCCGAGGCTGAGCGAGGAAGACAATTCCCAGCATCTT +
Preference number: 1 (lower is better)
Translates to: SQDVRGLLCNCLILQ*GKPRLSEEDNSQHL
Trigger: AAGATGCTGGGAATTGTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 90 bp ACGGCAGGTGGCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTaGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCAC +
Preference number: 1 (lower is better)
Translates to: TAGGWKVASSSPMLA*HVHACKARRFCGLH
Trigger: GTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR TCA 90 bp GCGTTTGCAGGACACGCAGTCACACAACACCTCACAACAGCCCTGTaGGGTAGGGATGAGTCCCATGGAACGGTCCAGAAAACGCAGGCT +
Preference number: 1 (lower is better)
Translates to: AFAGHAVTQHLTTAL*GRDESHGTVQKTQA
Trigger: AGCCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAGGTGTTGTGTGACTGCGTGTCCTGCAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 90 bp GCCTCCTCTGCAACTGCCTCATCTTACAGTGCGGGAAGCCGAGGCTaGGCGAGGAAGACAATTCCCAGCATCTTCTATACTACCAATCCC +
Preference number: 1 (lower is better)
Translates to: ASSATASSYSAGSRG*ARKTIPSIFYTTNP
Trigger: GGGATTGGTAGTATAGAAGATGCTGGGAATTGTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 90 bp CCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAA +
Preference number: 1 (lower is better)
Translates to: PTQVKVHSSNAQSPL*SQCSLLPGSEVTGQ
Trigger: TTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
3UTR TCA 90 bp CGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGATATaGAAAAACCCAACGGCAGGTGGCTGGAAAGTGGCTTCTAGCTCC +
Preference number: 1 (lower is better)
Translates to: RDATVSLRTRHYVQI*KNPTAGGWKVASSS
Trigger: GGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR GCA 90 bp CAAGCAGGTTTTGAAGGAAAAGTTCAATCAGCCCACTTGCACCTCTaGCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGAG +
Preference number: 1 (lower is better)
Translates to: QAGFEGKVQSAHLHL*LMQMLCVPHTSGWE
Trigger: CTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTTTCCTTCAAAACCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp CTCAGCAAACACAGAAATCCTCTTCATTCTTCTCGACCAAGAATCTaGAGTCCTCCTCCCTCCTCTAGGGCGCACAGCTTAGCCCTGACC +
Preference number: 1 (lower is better)
Translates to: LSKHRNPLHSSRPRI*SPPPSSRAHSLALT
Trigger: GGTCAGGGCTAAGCTGTGCGCCCTAGAGGAGGGAGGAGGACTGCAGATTCTTGGTCGAGAAGAATGAAGAGGATTTCTGTGTTTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 90 bp ATGAGTGTACAGTTTGGAGTTCGGAAAATTAGCACACGTTCTGTTTaGTTCAGGGTCCCTCTCCACCTGGGTCACTGGCGCAGCAGTAAG +
Preference number: 1 (lower is better)
Translates to: MSVQFGVRKISTRSV*FRVPLHLGHWRSSK
Trigger: CTTACTGCTGCGCCAGTGACCCAGGTGGAGAGGGACCCTGAACCAAACAGAACGTGTGCTAATTTTCCGAACTCCAAACTGTACACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 90 bp CCGGGATCCCATTTCATCAAAGGTCCAGGACAGACAAGCAGGTTTTaGAGGAAAAGTTCAATCAGCCCACTTGCACCTCTGCCTAATGCA +
Preference number: 1 (lower is better)
Translates to: PGSHFIKGPGQTSRF*RKSSISPLAPLPNA
Trigger: TGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTTTCCTTCAAAACCTGCTTGTCTGTCCTGGACCTTTGATGAAATGGGATCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp AAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATaGAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTT +
Preference number: 1 (lower is better)
Translates to: KVASSSPMLAWHVHA*KARRFCGLHQTVNF
Trigger: AAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR GCA 90 bp TTCCTTTGCTCCAGCGAGTCCAGGCAACCTTTCAAGTTCATTTGCTaGCTGAAAGAAAGGTTTTTAGTATCAGAAAGAACCTCGCTGTCC +
Preference number: 1 (lower is better)
Translates to: FLCSSESRQPFKFIC*LKERFLVSERTSLS
Trigger: GGACAGCGAGGTTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGCAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 90 bp GCTTTCCTTTGCTCCAGCGAGTCCAGGCAACCTTTCAAGTTCATTTaGTGCCTGAAAGAAAGGTTTTTAGTATCAGAAAGAACCTCGCTG +
Preference number: 1 (lower is better)
Translates to: AFLCSSESRQPFKFI*CLKERFLVSERTSL
Trigger: CAGCGAGGTTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGCAAAGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CCA 90 bp CCTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGTCTGCCCAGCACACCTaGTGGGCAGCCCCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PSQPCQGHPRGSVGRGSQSAQHT*WAAPGP
Trigger: AGGCCCAGGGGCTGCCCACCAGGTGTGCTGGGCAGA...CTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR TCA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCGGAAGCCGGTGTAGGTaGGTCGGACTCCAGCGTCCC +
Preference number: 2 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCGSRCR*VGLQRP
Trigger: GGGACGCTGGAGTCCGACTCACCTACACCGGCTTCC...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR GCA 90 bp CTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGGTCCGAGGCCTCCTCTaGAACTGCCTCATCTTACAG +
Preference number: 2 (lower is better)
Translates to: LASPARATQGGVWAEGHRVRGLL*NCLILQ
Trigger: CTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGAC...CCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR GCA 90 bp TCTGGCCTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCAGTCCCAGCTGAAGTCTaGCCAGCACACCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SGLGGPHCLSLRDRDPISVPAEV*PAHLVG
Trigger: GCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGAC...TGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CAA 90 bp AGGAGATGGAGTGCACGGTCAGGTTCTAGAGAGAGCCCTCTGGCCTaGCACCACAAGACGCAGGCGTGGGTCAAGGCTGCGTGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: RRWSARSGSRESPLA*HHKTQAWVKAACCR
Trigger: GCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCACTCCATCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CAA 90 bp CACATGACGCCCTGTGAAGGACGTGGCCCAGCCGCCTACTCTCTGTaGCTGTCTCCCGCTACGACCTCTCACACAGGTAGGAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: HMTPCEGRGPAAYSL*LSPATTSHTGRKPL
Trigger: CAGGGGCTTCCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CAA 90 bp GCGTTTATTGGGTGCCCACCGCTGGCTGGGCACCGAGCTGGGCGTTaGCAGGACACGCAGTCACACAACACCTCACAACAGCCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: AFIGCPPLAGHRAGR*QDTQSHNTSQQPCE
Trigger: CTCACAGGGCTGTTGTGAGGTGTTGTGTGACTGCGTGTCCTGCAAACGCCCAGCTCGGTGCCCAGCCAGCGGTGGGCACCCAATAAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR GCA 90 bp CTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGCAGAACTGGAAATaGAGCTCACTCTTTGGTGAC +
Preference number: 2 (lower is better)
Translates to: LASPARATQGGVWAEGHRTQNWK*SSLFGD
Trigger: GTCACCAAAGAGTGAGCTGCATTTCCAGTTCTGCGT...CCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CCA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGCCAACGGCAGGTGGCTaGAAAGTGGCTTCTAGCTCC +
Preference number: 2 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWPTAGG*KVASSS
Trigger: GGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGG...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR-3UTR GCA 90 bp AAACGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: KRRENGPGGALGRSDFCPEASVL*SPGQRS
Trigger: TGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTC...GGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
3UTR-3UTR GCA 90 bp TCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCTTCTAGCTCCCCTATaGTGGCTTGGCACGTTCATG +
Preference number: 2 (lower is better)
Translates to: SRWGPREIGLLSQLKSAQLLAPL*WLGTFM
Trigger: CATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG...CTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
3UTR CAA 90 bp CGGACAGCGGGGCCAGCGAAAGGACAGCTCAGACGGCCACCACACTaGAGTTCTGTGCTTTCCTGGGCATGGGAGGAGCTACAAACTTTA +
Preference number: 2 (lower is better)
Translates to: RTAGPAKGQLRRPPH*SSVLSWAWEELQTL
Trigger: TAAAGTTTGTAGCTCCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR TCA 90 bp CTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCATCAAAGGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LGGPHCLSLRDRDPISSKAQSPL*SQCSLL
Trigger: GAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGC...CTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR GCA 90 bp CAACAGCCCTGTGAGGTAGGGATGAGTCCCATGGAACGGTCCAGAAAACGCAGGCCGCCTACTCTCTGTTaGTGTCTCCCGCTACGACCT +
Preference number: 2 (lower is better)
Translates to: QQPCEVGMSPMERSRKRRPPTLC*CLPLRP
Trigger: AGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGG...CCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CCA 90 bp AGGCCGCCAGTGAGGCTGGGACTCATAGGTTCGAGCAGAGGAAGAGGAGCTGGTACCATGACAACCATCTaGAAACAGGCGTCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: RPPVRLGLIGSSRGRGAGTMTTI*KQASQP
Trigger: AGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGT...ACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCTCACTGGCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CAA 90 bp GGAAAAGTTCAATCAGCCCACTTGCACCTCTGCCTAATGCAGATGTaGTGTGTGCCGCACACCAGCGGCTGGGAGGAAGCCGGTGTAGGT +
Preference number: 2 (lower is better)
Translates to: GKVQSAHLHLCLMQM*CVPHTSGWEEAGVG
Trigger: ACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CCA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAAGACAAAAGAGACCTaGCAAAGGAAATTTGAGTCT +
Preference number: 2 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCKTKET*QRKFES
Trigger: AGACTCAAATTTCCTTTGCCAGGTCTCTTTTGTCTT...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR GCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLEASVL*SPGQRS
Trigger: TGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTC...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
3UTR-3UTR GCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVEASVL*SPGQRS
Trigger: TGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTC...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
3UTR-3UTR GCA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGATTAATGCCACTTAAATaGCCTCGACACTTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGLMPLK*PRHFGC
Trigger: GCAGCCAAAGTGTCGAGGGCATTTAAGTGGCATTAA...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR TCA 90 bp CAACAGCCCTGTGAGGTAGGGATGAGTCCCATGGAACGGTCCAGAAAACGCAGGCAGACAAGCAGGTTTTaGAGGAAAAGTTCAATCAGC +
Preference number: 2 (lower is better)
Translates to: QQPCEVGMSPMERSRKRRQTSRF*RKSSIS
Trigger: GCTGATTGAACTTTTCCTTCAAAACCTGCTTGTCTG...CCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR GCA 90 bp AAAGTTCAATCAGCCCACTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGGGCTTGGCACGTTCATaGATGCAAAGCGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: KVQSAHLHLCLMQMLCVPGLARS*MQSEEV
Trigger: AACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCC...CGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR GCA 90 bp ATAGAAAGGCACATGACGCCCTGTGAAGGACGTGGCCCAGCCGCCTACTCTCTGCCTTTCAAGTTCATTTaGTGCCTGAAAGAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: IERHMTPCEGRGPAAYSLPFKFI*CLKERF
Trigger: AAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGG...CAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGCCTTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CCA 90 bp GTAAATAGTTTTTGCCTTTTCCCTTCTATCCGTAACTTCCACCACTCCATAGATCCAACGGCAGGTGGCTaGAAAGTGGCTTCTAGCTCC +
Preference number: 2 (lower is better)
Translates to: VNSFCLFPSIRNFHHSIDPTAGG*KVASSS
Trigger: GGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGG...ATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CAA 90 bp CGCTTTCCTTTGCTCCAGCGAGTCCAGGCAACCTTTCAAGTTCATTaGCTGCCTGAAAGAAAGGTTTTTAGTATCAGAAAGAACCTCGCT +
Preference number: 2 (lower is better)
Translates to: RFPLLQRVQATFQVH*LPERKVFSIRKNLA
Trigger: AGCGAGGTTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGCAAAGGAAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CAA 90 bp TTCCATCCAGCTCTTGGTCCCATTGTTTTAGAGATTACAGAAGGTTaGGTCCCAGAGTCCACTGAGCCCATTCACAACGTTTACAGGTTT +
Preference number: 2 (lower is better)
Translates to: FHPALGPIVLEITEG*VPESTEPIHNVYRF
Trigger: AAACCTGTAAACGTTGTGAATGGGCTCAGTGGACTCTGGGACCAAACCTTCTGTAATCTCTAAAACAATGGGACCAAGAGCTGGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR TCA 90 bp ACTGAAGTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: TEVKMMYFLSVMELDYHYAQSPL*SQCSLL
Trigger: GAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGC...GTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR-3UTR GCA 90 bp TTAATTATACAAACAAAATCGCTTTCCTTTGCTCCAGCGAGTCCAGGCAACCTTTGGCACGTTCATGCATaGAAAGCGAGGAGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: LIIQTKSLSFAPASPGNLWHVHA*KARRFC
Trigger: GCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCA...AAGGTTGCCTGGACTCGCTGGAGCAAAGGAAAGCGATTTTGTTTGTATAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp TTCCCGTGGTCTGCAGGGAACGCACCTAGCCAGCCCTaGCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGG +
Preference number: 3 (lower is better)
Translates to: FPWSAGNAPSQP*QGHPRGSVGRG
Trigger: CCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTTCCCTGCAGACCACGGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 72 bp GGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTaGAGTCTGCCCAGCACACCTGGTGGGCAGCCCCTG +
Preference number: 3 (lower is better)
Translates to: GGALGRSDFCPS*SLPSTPGGQPL
Trigger: CAGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
3UTR GCA 72 bp CTCCCGCTACGACCTCTCACACAGGTAGGAAGCCCCTaGGGACAGCGGGGCCAGCGAAAGGACAGCTCAGAC +
Preference number: 3 (lower is better)
Translates to: LPLRPLTQVGSP*GQRGQRKDSSD
Trigger: GTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCCGCAGGGGCTTCCTACCTGTGTGAGAGGTCGTAGCGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp CACCACAAGACGCAGGCGTGGGTCAAGGCTGCGTGCTaGCGCGGCCCTTCTCATCCCTGCTCAAGCATAGCC +
Preference number: 3 (lower is better)
Translates to: HHKTQAWVKAAC*RGPSHPCSSIA
Trigger: GGCTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp GTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTaGAACTGCCTCATCTTACAGTGCGGGAAGCCGAGG +
Preference number: 3 (lower is better)
Translates to: VGRGSQDVRGLL*NCLILQCGKPR
Trigger: CCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp GGTGCCCACCGCTGGCTGGGCACCGAGCTGGGCGTTTaGAGGACACGCAGTCACACAACACCTCACAACAGC +
Preference number: 3 (lower is better)
Translates to: GAHRWLGTELGV*RTRSHTTPHNS
Trigger: GCTGTTGTGAGGTGTTGTGTGACTGCGTGTCCTGCAAACGCCCAGCTCGGTGCCCAGCCAGCGGTGGGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 72 bp GCCGCACACCAGCGGCTGGGAGGAAGCCGGTGTAGGTaGGTCGGACTCCAGCGTCCCCTGCATTTAGTTTGC +
Preference number: 3 (lower is better)
Translates to: AAHQRLGGSRCR*VGLQRPLHLVC
Trigger: GCAAACTAAATGCAGGGGACGCTGGAGTCCGACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp CCCACTCTGGCCTCGGCGGTCCCCACTGTCTCAGCCTaGGTGACCGGGATCCCATTTCATCAAAGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: PTLASAVPTVSA*VTGIPFHQRSR
Trigger: CCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAGAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp CGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAACTaGCTCATCTTACAGTGCGGGAAGCCGAGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: RGSQDVRGLLCN*LILQCGKPRLS
Trigger: GCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 72 bp CTCTGGCCTCGGCGGTCCCCACTGTCTCAGCCTGCGTaGCCGGGATCCCATTTCATCAAAGGTCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: LWPRRSPLSQPA*PGSHFIKGPGQ
Trigger: CTGTCCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp GTGCACGGTCAGGTTCTAGAGAGAGCCCTCTGGCCTTaGACCACAAGACGCAGGCGTGGGTCAAGGCTGCGT +
Preference number: 3 (lower is better)
Translates to: VHGQVLERALWP*TTRRRRGSRLR
Trigger: ACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 72 bp GTTTATTGGGTGCCCACCGCTGGCTGGGCACCGAGCTaGGCGTTTGCAGGACACGCAGTCACACAACACCTC +
Preference number: 3 (lower is better)
Translates to: VYWVPTAGWAPS*AFAGHAVTQHL
Trigger: GAGGTGTTGTGTGACTGCGTGTCCTGCAAACGCCCAGCTCGGTGCCCAGCCAGCGGTGGGCACCCAATAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CAA 90 bp CTCAGCGGCCTCCCTCTGTCCCCGTCACTCCTGAGCATGTCTGAGGCCGCCAGTCAAAGCGAGGAGGTTTaGCGGGCTTCACCAAACAGT +
Preference number: 3 (lower is better)
Translates to: LSGLPLSPSLLSMSEAASQSEEV*RASPNS
Trigger: ACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTG...ACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp CCTGTGAAGGACGTGGCCCAGCCGCCTACTCTCTGTTaGTGTCTCCCGCTACGACCTCTCACACAGGTAGGA +
Preference number: 3 (lower is better)
Translates to: PVKDVAQPPTLC*CLPLRPLTQVG
Trigger: TCCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 72 bp CTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTaGGAGGAAGCCGGTGTAGGTGAGTCGGACTCCAGC +
Preference number: 3 (lower is better)
Translates to: LMQMLCVPHTSG*EEAGVGESDSS
Trigger: GCTGGAGTCCGACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 72 bp GATGGAGTGCACGGTCAGGTTCTAGAGAGAGCCCTCTaGCCTTGCACCACAAGACGCAGGCGTGGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: DGVHGQVLERAL*PCTTRRRRGSR
Trigger: CCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCACTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CAA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGCTCCCCTATGCTGGCTaGGCACGTTCATGCATGCAA +
Preference number: 3 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWLPYAG*ARSCMQ
Trigger: TTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR TCA 72 bp GGCCAGCGAAAGGACAGCTCAGACGGCCACCACACTTaGGTTCTGTGCTTTCCTGGGCATGGGAGGAGCTAC +
Preference number: 3 (lower is better)
Translates to: GQRKDSSDGHHT*VLCFPGHGRSY
Trigger: GTAGCTCCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp GTCCGAGGCCTCCTCTGCAACTGCCTCATCTTACAGTaGGGGAAGCCGAGGCTGAGCGAGGAAGACAATTCC +
Preference number: 3 (lower is better)
Translates to: VRGLLCNCLILQ*GKPRLSEEDNS
Trigger: GGAATTGTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CAA 90 bp AGGCCGCCAGTGAGGCTGGGACTCATAGGTTCGAGCAGAGGAAGAGGAGCTGGTTGCCTAATGCAGATGTaGTGTGTGCCGCACACCAGC +
Preference number: 3 (lower is better)
Translates to: RPPVRLGLIGSSRGRGAGCLMQM*CVPHTS
Trigger: GCTGGTGTGCGGCACACACAACATCTGCATTAGGCA...ACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCTCACTGGCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CAA 90 bp TGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAACTGCCTCATCTTAATGCAGCTCACTCTTaGGTGACAGGAAACCCTAGC +
Preference number: 3 (lower is better)
Translates to: CGPRVTGRPRPPLQLPHLNAAHS*VTGNPS
Trigger: GCTAGGGTTTCCTGTCACCAAAGAGTGAGCTGCATT...AAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp CGGCAGGTGGCTGGAAAGTGGCTTCTAGCTCCCCTATaGTGGCTTGGCACGTTCATGCATGCAAAGCGAGGA +
Preference number: 3 (lower is better)
Translates to: RQVAGKWLLAPL*WLGTFMHAKRG
Trigger: TCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR CCA 72 bp CAGGTGGCTGGAAAGTGGCTTCTAGCTCCCCTATGCTaGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGT +
Preference number: 3 (lower is better)
Translates to: QVAGKWLLAPLC*LGTFMHAKRGG
Trigger: ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR-3UTR CAA 90 bp CTCAGCGGCCTCCCTCTGTCCCCGTCACTCCTGAGCATGTCTGAGGCCGCCAGTCAATCTCTCATCGGTTaGCTGAGGAAATTTTCTAAG +
Preference number: 3 (lower is better)
Translates to: LSGLPLSPSLLSMSEAASQSLIG*LRKFSK
Trigger: CTTAGAAAATTTCCTCAGCAAACCGATGAGAGATTG...ACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 72 bp GGACACGCAGTCACACAACACCTCACAACAGCCCTGTaGGGTAGGGATGAGTCCCATGGAACGGTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: GHAVTQHLTTAL*GRDESHGTVQK
Trigger: TTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAGGTGTTGTGTGACTGCGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp TGCAGAAGACACATTTATGTTGTAGCGTTTATTGGGTaGCCACCGCTGGCTGGGCACCGAGCTGGGCGTTTG +
Preference number: 3 (lower is better)
Translates to: CRRHIYVVAFIG*PPLAGHRAGRL
Trigger: CAAACGCCCAGCTCGGTGCCCAGCCAGCGGTGGGCACCCAATAAACGCTACAACATAAATGTGTCTTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CCA 72 bp GGCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTaGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: GWKVASSSPMLA*HVHACKARRFC
Trigger: GCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR CCA 72 bp TCCAGCTCTTCGCCCAGCGTGACCATGACAACCATCTaGAAACAGGCGTCCCAGCCTTCCTCGGTTCAAAAA +
Preference number: 3 (lower is better)
Translates to: SSSSPSVTMTTI*KQASQPSSVQK
Trigger: TTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGTCACGCTGGGCGAAGAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp TCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATaGAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACA +
Preference number: 3 (lower is better)
Translates to: SSSPMLAWHVHA*KARRFCGLHQT
Trigger: TGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR CCA 72 bp CAGTTTGGAGTTCGGAAAATTAGCACACGTTCTGTTTaGTTCAGGGTCCCTCTCCACCTGGGTCACTGGCGC +
Preference number: 3 (lower is better)
Translates to: QFGVRKISTRSV*FRVPLHLGHWR
Trigger: GCGCCAGTGACCCAGGTGGAGAGGGACCCTGAACCAAACAGAACGTGTGCTAATTTTCCGAACTCCAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 72 bp GTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: VKVHSSNAQSPL*SQCSLLPGSEV
Trigger: GACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
3UTR TCA 72 bp GCAACTGCCTCATCTTACAGTGCGGGAAGCCGAGGCTaGGCGAGGAAGACAATTCCCAGCATCTTCTATACT +
Preference number: 3 (lower is better)
Translates to: ATASSYSAGSRG*ARKTIPSIFYT
Trigger: AGTATAGAAGATGCTGGGAATTGTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR-3UTR CAA 90 bp CCTCTCCACCTGGGTCACTGGCGCAGCAGTAAGAGTTCTAACGGGCAACTCAGCACAGACAAGCAGGTTTaGAAGGAAAAGTTCAATCAG +
Preference number: 3 (lower is better)
Translates to: PLHLGHWRSSKSSNGQLSTDKQV*KEKFNQ
Trigger: CTGATTGAACTTTTCCTTCAAAACCTGCTTGTCTGT...GCTGAGTTGCCCGTTAGAACTCTTACTGCTGCGCCAGTGACCCAGGTGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp CACAGAAATCCTCTTCATTCTTCTCGACCAAGAATCTaGAGTCCTCCTCCCTCCTCTAGGGCGCACAGCTTA +
Preference number: 3 (lower is better)
Translates to: HRNPLHSSRPRI*SPPPSSRAHSL
Trigger: TAAGCTGTGCGCCCTAGAGGAGGGAGGAGGACTGCAGATTCTTGGTCGAGAAGAATGAAGAGGATTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR GCA 72 bp TTTGAAGGAAAAGTTCAATCAGCCCACTTGCACCTCTaGCTAATGCAGATGTTGTGTGTGCCGCACACCAGC +
Preference number: 3 (lower is better)
Translates to: FEGKVQSAHLHL*LMQMLCVPHTS
Trigger: GCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTTTCCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR TCA 72 bp ACGGTTTCCTTACGCACTCGGCATTATGTACAGATATaGAAAAACCCAACGGCAGGTGGCTGGAAAGTGGCT +
Preference number: 3 (lower is better)
Translates to: TVSLRTRHYVQI*KNPTAGGWKVA
Trigger: AGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTACATAATGCCGAGTGCGTAAGGAAACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR GCA 72 bp AGATCATTTAATTATACAAACAAAATCGCTTTCCTTTaGTCCAGCGAGTCCAGGCAACCTTTCAAGTTCATT +
Preference number: 3 (lower is better)
Translates to: RSFNYTNKIAFL*SSESRQPFKFI
Trigger: AATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGCAAAGGAAAGCGATTTTGTTTGTATAATTAAATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCGAGGGCGGGTCAGGCTaGACTCAGGGTCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCEGGSG*TQGRRR
Trigger: CCGGCGCCGACCCTGAGTGCAGCCTGACCCGCCCTC...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCGGGTCCCTCTCCACCTaGGTCACTGGCGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: QGHPRGSVGRGSQDVRGLGSLST*VTGAAV
Trigger: TACTGCTGCGCCAGTGACCCAGGTGGAGAGGGACCC...GAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp GCCTTGACAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCGCCAGGTTCATGGCTaGGCGCGCGGCGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALTSRPTVRDATVSLRTRRQVHG*ARGEWA
Trigger: GGCCCACTCGCCGCGCGCCCAGCCATGAACCTGGCG...CCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCAGGCGCAGGGCGCTaGCCTCGTCCTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSPGAGR*PRPPGR
Trigger: CCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGG...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCGCACCTAGCCAGCCCTaGCAGGGCCACCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: RRENGPGGALGRSDFCPSAPSQP*QGHPRG
Trigger: CCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGC...GCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp TGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAACTGCCTCATCTTGGCTCCCAGGCGCCCTaGCTGCTCCCACAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: CGPRVTGRPRPPLQLPHLGSQAP*LLPQLG
Trigger: GCCTAGCTGTGGGAGCAGGCAGGGCGCCTGGGAGCC...AAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CCTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGACTAAGGGGCAGTCGTaGGAGGCAGAGTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: PSQPCQGHPRGSVGRGSQTKGQS*EAESKI
Trigger: GATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT...CTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCGACTTCTGTCCCAGCTaGAGTCTGCCCAGCACACCT +
Preference number: 4 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCDFCPS*SLPSTP
Trigger: AGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTC...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCGGCCCTTCTCATCCCTaGTCAAGCATAGCCCACTCT +
Preference number: 4 (lower is better)
Translates to: QGHPRGSVGRGSQDVRGLGPSHP*SSIAHS
Trigger: AGAGTGGGCTATGCTTGAGCAGGGATGAGAAGGGCC...GAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CCTGCGGACAGCGGGGCCAGCGAAAGGACAGCTCAGACGGCCACCACACTTGAGAGTACCCGGTCCAGGTaGTGGGCTCCTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: PADSGASERTAQTATTLESTRSR*WAPLGV
Trigger: AACCCCCAGAGGAGCCCACCACCTGGACCGGGTACT...CTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCCGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGACCAGGCGCAGGGCGCTaGCCTCGTCCTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGPGAGR*PRPPGR
Trigger: CCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGG...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGCCAGGCGCAGGGCGCTaGCCTCGTCCTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QADPLCATPRFPYALGIMPGAGR*PRPPGR
Trigger: CCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGG...CATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR CAA 72 bp GGGTGCCCACCGCTGGCTGGGCACCGAGCTGGGCGTTaGCAGGACACGCAGTCACACAACACCTCACAACAG +
Preference number: 4 (lower is better)
Translates to: GCPPLAGHRAGR*QDTQSHNTSQQ
Trigger: CTGTTGTGAGGTGTTGTGTGACTGCGTGTCCTGCAAACGCCCAGCTCGGTGCCCAGCCAGCGGTGGGCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCAGCAGTTGTCGTTGTTaGTTGACAGCGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: QGHPRGSVGRGSQDVRGLSSCRC*LTAHTG
Trigger: GCCTGTGTGCGCTGTCAATCAACAACGACAACTGCT...GAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCCCGTCCAGCCGGTGCTaGTTCATCAGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPPSSRC*FIRAHS
Trigger: CGAGTGTGCCCTGATGAAGCAGCACCGGCTGGACGG...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCGTCAAGGCTGCGTGCTaGCGCGGCCCTTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSVKAAC*RGPSHP
Trigger: GGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGAC...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp AAACGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCGGCTCGCCAGGTTCATaGCTGGGCGCGCGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: KRRENGPGGALGRSDFCPGSPGS*LGARRV
Trigger: CACTCGCCGCGCGCCCAGCCATGAACCTGGCGAGCC...GGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp ATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCTATGGCAGGCGGACCGTaGCGAAGGCTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: IGLLSQLKSAQHTWWAAPMAGGP*RRLCPG
Trigger: ACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCAT...AGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCCTGGTGGGCAGCCCCTaGGCCTGTCACTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPLVGSP*ACHCRT
Trigger: AGTTCTGCAGTGACAGGCCCAGGGGCTGCCCACCAG...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CTCAGCGGCCTCCCTCTGTCCCCGTCACTCCTGAGCATGTCTGAGGCCGCCAGTAGCTGGTGGAGGCCATaGGCACTTTCCCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: LSGLPLSPSLLSMSEAASSWWRP*ALSRST
Trigger: GGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCT...ACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGAGCACATGACGCCCTGTaGAGGACGTGGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGAHDAL*RTWPSR
Trigger: GCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGC...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAGAGGGCGGGTCAGGCTaGACTCAGGGTCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHAEGGSG*TQGRRR
Trigger: CCGGCGCCGACCCTGAGTGCAGCCTGACCCGCCCTC...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CCTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGTGGCACGTTCATGCATaGAAAGCGAGGAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PSQPCQGHPRGSVGRGSQWHVHA*KARRFC
Trigger: GCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCA...CTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp AACGCACCTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGGCCCACTTGCACCTCTaGCTAATGCAGATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: NAPSQPCQGHPRGSVGRGAHLHL*LMQMLC
Trigger: ACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGC...CCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTCTGCCCAGCACACCTaGTGGGCAGCCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QADPLCATPRFPYALGIMSAQHT*WAAPGP
Trigger: AGGCCCAGGGGCTGCCCACCAGGTGTGCTGGGCAGA...CATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCCACTCTTGCCAAAAGTaGCTCCCAGGAGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCHSCQK*LPGDGV
Trigger: CACTCCATCTCCTGGGAGCCACTTTTGGCAAGAGTG...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GCCTTGACAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGACATGCCGTCCATGCTaGAGGCCAGGGAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: ALTSRPTVRDATVSLRTRTCRPC*RPGSRC
Trigger: GCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGT...CCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCACGCAGGGCACAGCGCTaGGGGTGCCTGCGGAACATG +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSRRAQR*GCLRNM
Trigger: CATGTTCCGCAGGCACCCTCAGCGCTGTGCCCTGCG...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR GCA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGCAAGCAGACCCACTGTaGGCGACGCCACGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWQADPL*ATPRFP
Trigger: AGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTG...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCCAGGTAGGAAGCCCCTaGGGACAGCGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVQVGSP*GQRGQR
Trigger: TCGCTGGCCCCGCTGTCCGCAGGGGCTTCCTACCTG...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCACTTTGGCTGCTGGGTaGCTTGGTTTGGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCTLAAG*LGLECR
Trigger: TCTGCATTCCAAACCAAGGCACCCAGCAGCCAAAGT...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCAGTCCAAGATCTCATTaGTCGTTTCCAGACTGCCGT +
Preference number: 4 (lower is better)
Translates to: QGHPRGSVGRGSQDVRGLSPRSH*SFPDCR
Trigger: ACGGCAGTCTGGAAACGACCAATGAGATCTTGGACT...GAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCCCAACGGCAGGTGGCTaGAAAGTGGCTTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPPTAGG*KVASSS
Trigger: GGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGG...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCATCTGCCCAGCACACCTaGTGGGCAGCCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSSAQHT*WAAPGP
Trigger: AGGCCCAGGGGCTGCCCACCAGGTGTGCTGGGCAGA...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCATCAAAGAAGCATAGCCCACTCTaGCCTCGGCGGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: LGGPHCLSLRDRDPISSKKHSPL*PRRSPL
Trigger: CAGTGGGGACCGCCGAGGCCAGAGTGGGCTATGCTT...CTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGAACCCAAGGGGGAGTGTaGGCCGAGGGTCACAGGACG +
Preference number: 4 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGTQGGV*AEGHRT
Trigger: CGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGT...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp AACGCACCTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGAGATTACAGAAGGTTTaGTCCCAGAGTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: NAPSQPCQGHPRGSVGRGRLQKV*SQSPLS
Trigger: GCTCAGTGGACTCTGGGACCAAACCTTCTGTAATCT...CCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGCGGAACATGTGGTCATaGGGTGGGGACAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKRNMWS*GGDSPG
Trigger: CCCCGGGCTGTCCCCACCCCATGACCACATGTTCCG...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484262.1
3UTR CAA 72 bp CCCTGTGAAGGACGTGGCCCAGCCGCCTACTCTCTGTaGCTGTCTCCCGCTACGACCTCTCACACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PCEGRGPAAYSL*LSPATTSHTGR
Trigger: CCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
3UTR CAA 72 bp AGTGCACGGTCAGGTTCTAGAGAGAGCCCTCTGGCCTaGCACCACAAGACGCAGGCGTGGGTCAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SARSGSRESPLA*HHKTQAWVKAA
Trigger: CGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGCGCCGTATGTCTGAGTaGCTAAGGGGCAGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWRRMSE*LRGSRE
Trigger: CTCACGACTGCCCCTTAGTCACTCAGACATACGGCG...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCGACTTCTGTCCCAGCTaGAGTCTGCCCAGCACACCT +
Preference number: 4 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSDFCPS*SLPSTP
Trigger: AGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTC...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp TGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAACTGCCTCATCTTGACGGCCACCACACTTaGGTTCTGTGCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CGPRVTGRPRPPLQLPHLDGHHT*VLCFPG
Trigger: CCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTC...AAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGGAAGCCGGTGTAGGTaGGTCGGACTCCAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRGSRCR*VGLQRP
Trigger: GGGACGCTGGAGTCCGACTCACCTACACCGGCTTCC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CTCAGCGGCCTCCCTCTGTCCCCGTCACTCCTGAGCATGTCTGAGGCCGCCAGTCAGCTCACTCTTTGGTaGCAGGAAACCCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LSGLPLSPSLLSMSEAASQLTLW*QETLAQ
Trigger: CTGAGCTAGGGTTTCCTGTCACCAAAGAGTGAGCTG...ACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGTGTCCCCGTCACTCCTaGGCATGTCTGAGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKCPRHS*ACLRPP
Trigger: TGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACA...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAGGGCGGGTCAGGCTaGACTCAGGGTCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCEGGSG*TQGRRR
Trigger: CCGGCGCCGACCCTGAGTGCAGCCTGACCCGCCCTC...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
CDS-3UTR GCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGCCGTCCAGCCGGTGCTaGTTCATCAGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKPSSRC*FIRAHS
Trigger: CGAGTGTGCCCTGATGAAGCAGCACCGGCTGGACGG...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp AAACGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCCTGCCGTCCAGCCGGTaGTGCTTCATCAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: KRRENGPGGALGRSDFCPLPSSR*CFIRAH
Trigger: GTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAG...GGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR GCA 90 bp TGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAACTGCCTCATCTTGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CGPRVTGRPRPPLQLPHLEASVL*SPGQRS
Trigger: TGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTC...AAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCGCCTACTCTCTGTTaGTGTCTCCCGCTACGACCT +
Preference number: 4 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSPPTLC*CLPLRP
Trigger: AGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGG...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCGCCAGGTTCATGGCTaGGCGCGCGGCGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSRQVHG*ARGEWA
Trigger: GGCCCACTCGCCGCGCGCCCAGCCATGAACCTGGCG...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
CDS-3UTR CCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCGCCAGGTTCATGGCTaGGCGCGCGGCGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPRQVHG*ARGEWA
Trigger: GGCCCACTCGCCGCGCGCCCAGCCATGAACCTGGCG...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
CDS-3UTR CCA 90 bp CGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCCAGTCCGAAGAATCATaGGCGGGTGCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RRENGPGGALGRSDFCPSQSEES*AGARCP
Trigger: AGGACAGCGAGCACCCGCCCATGATTCTTCGGACTG...GCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp TCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCCAACGGCAGGTGGCTaGAAAGTGGCTTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRWGPREIGLLSQLKSAQPTAGG*KVASSS
Trigger: GGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGG...CTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp GGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGCTGGTGGGCAGCCCCTaGGCCTGTCACTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GKWSRWGPREIGLLSQLKLVGSP*ACHCRT
Trigger: AGTTCTGCAGTGACAGGCCCAGGGGCTGCCCACCAG...CTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGCATGTGGTCATGGGGTaGGGACAGCCCGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRHVVMG*GQPGGL
Trigger: CAGACCCCCGGGCTGTCCCCACCCCATGACCACATG...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR TCA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCGGTCCCAGAGTCCACTaGGCCCATTCACAACGTTTA +
Preference number: 4 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPGPRVH*AHSQRL
Trigger: TAAACGTTGTGAATGGGCTCAGTGGACTCTGGGACC...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGCCCCGCTCTTGTTTATaGTCCAGAGCCGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQPRSCL*SRAGAP
Trigger: GGGTGCCCCGGCTCTGGAGCATAAACAAGAGCGGGG...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR GCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGCAGCGCACACAGGCCTaGAGGGTTTGGAGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQQRTQA*RVWRRL
Trigger: GAGACGCCTCCAAACCCTGCAGGCCTGTGTGCGCTG...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGACAGCGCACACAGGCCTaGAGGGTTTGGAGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRQRTQA*RVWRRL
Trigger: GAGACGCCTCCAAACCCTGCAGGCCTGTGTGCGCTG...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCACAGCGCACACAGGCCTaGAGGGTTTGGAGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSQRTQA*RVWRRL
Trigger: GAGACGCCTCCAAACCCTGCAGGCCTGTGTGCGCTG...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCATCAAAGGCACGGTCTCAGTGTTaGTGGAGGCGGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: LGGPHCLSLRDRDPISSKARSQC*WRRRGT
Trigger: TGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGC...CTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGCTGCCGTCCAGCCGGTaGTGCTTCATCAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: APLCWLGTFMHAKRGGFALPSSR*CFIRAH
Trigger: GTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAG...CGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGCTGCCGTCCAGCCGGTaGTGCTTCATCAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRLPSSR*CFIRAH
Trigger: GTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAG...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGCAAGCAGACCCACTGTaGGCGACGCCACGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKQADPL*ATPRFP
Trigger: AGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTG...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCTGGGTCAAGGCTGCGTaGTGCCGCGGCCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVWVKAA*CRGPSH
Trigger: ATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCA...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGACCCGGTCCAGGTGGTaGGCTCCTCTGGGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: QADPLCATPRFPYALGIMTRSRW*APLGVF
Trigger: AAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGT...CATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAGTACCCGGTCCAGGTaGTGGGCTCCTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRSTRSR*WAPLGV
Trigger: AACCCCCAGAGGAGCCCACCACCTGGACCGGGTACT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCGAGCAGATGTTTTTGTaGCCGCAGAATGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSEQMFL*PQNGRR
Trigger: CCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTC...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAACCAGGCGCAGGGCGCTaGCCTCGTCCTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEPGAGR*PRPPGR
Trigger: CCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGG...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TCTGGCCTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCACTAGCTCCCCTATGCTaGCTTGGCACGTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: SGLGGPHCLSLRDRDPISLAPLC*LGTFMH
Trigger: ATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG...TGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp ATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCTCAGGTGGCTGGAAAGTaGCTTCTAGCTCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: IGLLSQLKSAQHTWWAAPQVAGK*LLAPLC
Trigger: GCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTG...AGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCAGGTGGCTGGAAAGTaGCTTCTAGCTCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSQVAGK*LLAPLC
Trigger: GCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTG...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGCTGGTGGGCAGCCCCTaGGCCTGTCACTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQLVGSP*ACHCRT
Trigger: AGTTCTGCAGTGACAGGCCCAGGGGCTGCCCACCAG...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
3UTR CAA 72 bp CAATCAGCCCACTTGCACCTCTGCCTAATGCAGATGTaGTGTGTGCCGCACACCAGCGGCTGGGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QSAHLHLCLMQM*CVPHTSGWEEA
Trigger: GGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp ATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCTAGCAGTTGTCGTTGTTaGTTGACAGCGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: IGLLSQLKSAQHTWWAAPSSCRC*LTAHTG
Trigger: GCCTGTGTGCGCTGTCAATCAACAACGACAACTGCT...AGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAACATGCCGTCCATGCTaGAGGCCAGGGAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSTCRPC*RPGSRC
Trigger: GCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGT...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGACATGCCGTCCATGCTaGAGGCCAGGGAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRTCRPC*RPGSRC
Trigger: GCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAGCTGCGCCGTATGTCTaGGTGACTAAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSAAPYV*VTKGQS
Trigger: CGACTGCCCCTTAGTCACTCAGACATACGGCGCAGC...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWAQSPL*SQCSLL
Trigger: GAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGC...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CATCTGGAAACAGGCGTCCCAGCCTTCCTCGGTTCAAAAACCCCAGCCTGCAAACCGTCCAGCCGGTGCTaGTTCATCAGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: HLETGVPAFLGSKTPACKPSSRC*FIRAHS
Trigger: CGAGTGTGCCCTGATGAAGCAGCACCGGCTGGACGG...TTTGCAGGCTGGGGTTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGTGGTCGTTTCCAGACTaGCGTCCAGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQWSFPD*RPAGAA
Trigger: AGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCA...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGATGGTCGTTTCCAGACTaGCGTCCAGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRWSFPD*RPAGAA
Trigger: AGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCA...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTGGTCGTTTCCAGACTaGCGTCCAGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRWSFPD*RPAGAA
Trigger: AGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCA...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp TCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGACCTTTTCCTGCAGCTaGGCCGTATGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SRWGPREIGLLSQLKSAQTFSCS*AVCLSD
Trigger: GTCACTCAGACATACGGCGCAGCTGCAGGAAAAGGT...CTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR GCA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGAAGAATCATGGGCGGGTaGTCGCTGTCCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGRIMGG*SLSSSR
Trigger: CCTGGATGAGGACAGCGAGCACCCGCCCATGATTCT...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCGGCTTGGCACGTTCATaGATGCAAAGCGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RRENGPGGALGRSDFCPSGLARS*MQSEEV
Trigger: AACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCC...GCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR GCA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTGTCCCAGCTGAAGTCTaGCCAGCACACCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGVPAEV*PAHLVG
Trigger: GCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGAC...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGGGCCTCCTCTGCAACTaGCTCATCTTACAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GKWSRWGPREIGLLSQLKGLLCN*LILQCG
Trigger: CCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCC...CTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGGTAGCGTTTATTGGGTaGCCACCGCTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRVAFIG*PPLAGH
Trigger: GTGCCCAGCCAGCGGTGGGCACCCAATAAACGCTAC...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GCCTTGACAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGTGTGTAGGCTTTTCCTaGAGCTGCGCCGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: ALTSRPTVRDATVSLRTRCVGFS*SCAVCL
Trigger: CAGACATACGGCGCAGCTGCAGGAAAAGCCTACACA...CCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382384.6
CDS-3UTR GCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGAGCGCTGAGGGTGCCTaGGGAACATGTGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRSAEGA*GTCGHG
Trigger: CCCATGACCACATGTTCCGCAGGCACCCTCAGCGCT...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR CCA 90 bp ATAGAAAGGCACATGACGCCCTGTGAAGGACGTGGCCCAGCCGCCTACTCTCTGGATGGTCGCGCTCCCTaGGTACGCCAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: IERHMTPCEGRGPAAYSLDGRAP*VRQVAV
Trigger: AACTGCTACTTGGCGTACCCAGGGAGCGCGACCATC...CAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGCCTTTCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTTTGTGGCCGCAGAATaGCAGGCGGACCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRFVAAE*QADRGE
Trigger: TTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAA...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGTTTGTGGCCGCAGAATaGCAGGCGGACCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQFVAAE*QADRGE
Trigger: TTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAA...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTTTGTGGCCGCAGAATaGCAGGCGGACCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRFVAAE*QADRGE
Trigger: TTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAA...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTCTGCCCAGCACACCTaGTGGGCAGCCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLSAQHT*WAAPGP
Trigger: AGGCCCAGGGGCTGCCCACCAGGTGTGCTGGGCAGA...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGAGTTGTCGTTGTTGATTaGCAGCGCACACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGVVVVD*QRTQAC
Trigger: GCAGGCCTGTGTGCGCTGTCAATCAACAACGACAAC...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGGTTGTCGTTGTTGATTaGCAGCGCACACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GKWSRWGPREIGLLSQLKVVVVD*QRTQAC
Trigger: GCAGGCCTGTGTGCGCTGTCAATCAACAACGACAAC...CTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR TCA 90 bp CGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCGCTAAAGGACTGTCGTaGGCCGGAATCATGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RRENGPGGALGRSDFCPSAKGLS*AGIMFA
Trigger: TGCAAACATGATTCCGGCTCACGACAGTCCTTTAGC...GCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR TCA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTACATGCCGTCCATGCTaGAGGCCAGGGAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGTCRPC*RPGSRC
Trigger: GCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGT...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGAGCTGGTGGAGGCCATaGGCACTTTCCCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRSWWRP*ALSRST
Trigger: GGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCT...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAGCTGGTGGAGGCCATaGGCACTTTCCCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRSWWRP*ALSRST
Trigger: GGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGATGGTATCGAAGACCTaGACCTCTCCGATGGTCGCG +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKMVSKT*TSPMVA
Trigger: CGCGACCATCGGAGAGGTGCAGGTCTTCGATACCAT...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCAGCCGGAATCATGTTTaGAGCTCTCAAATTAATGGT +
Preference number: 4 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCSRNHV*SSQING
Trigger: ACCATTAATTTGAGAGCTGCAAACATGATTCCGGCT...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGAGGCCAGGGAGCAGATaGTCACGCACCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKRPGSR*SRTSLL
Trigger: GAGTAAAGAGGTGCGTGAGCATCTGCTCCCTGGCCT...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GCAGGTGGCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCACGGTCTCAGTGTTaGTGGAGGCGGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: AGGWKVASSSPMLAWHVHARSQC*WRRRGT
Trigger: TGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGC...ATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCACGGTCTCAGTGTTaGTGGAGGCGGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: LPYAGLARSCMQSEEVLRARSQC*WRRRGT
Trigger: TGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGC...CCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAGAATCATGGGCGGGTaGTCGCTGTCCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRRIMGG*SLSSSR
Trigger: CCTGGATGAGGACAGCGAGCACCCGCCCATGATTCT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCAAAATCGCTTTCCTTTaGTCCAGCGAGTCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPKIAFL*SSESRQ
Trigger: TTGCCTGGACTCGCTGGAGCAAAGGAAAGCGATTTT...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GCAGGTGGCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATCCCACTGTCTCAGCCTaGGTGACCGGGATCCCATTT +
Preference number: 4 (lower is better)
Translates to: AGGWKVASSSPMLAWHVHPTVSA*VTGIPF
Trigger: AAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGG...ATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSMSRML*MYRDSS
Trigger: GGAGGAGTCCCTGTACATCCACAACATTCGGGACAT...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAGATGGTCGCGCTCCCTaGGTACGCCAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSDGRAP*VRQVAV
Trigger: AACTGCTACTTGGCGTACCCAGGGAGCGCGACCATC...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTCCTGCACCTCTCCGATaGTCGCGCTCCCTGGGTACG +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCPAPLR*SRSLGT
Trigger: CGTACCCAGGGAGCGCGACCATCGGAGAGGTGCAGG...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCCCTGCACCTCTCCGATaGTCGCGCTCCCTGGGTACG +
Preference number: 4 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEAPAPLR*SRSLGT
Trigger: CGTACCCAGGGAGCGCGACCATCGGAGAGGTGCAGG...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGCCTGCACCTCTCCGATaGTCGCGCTCCCTGGGTACG +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLPAPLR*SRSLGT
Trigger: CGTACCCAGGGAGCGCGACCATCGGAGAGGTGCAGG...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCACGGTCTCAGTGTTGCTaGAGGCGGAGAGGAACATGC +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSRSQCC*RRRGTC
Trigger: GCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCG...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGGCGAAGGCTCTGCCCTaGTTGAACATTTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWAKALP*LNISVT
Trigger: AGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGC...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGATGGCAGGCGGACCGTaGCGAAGGCTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLMAGGP*RRLCPG
Trigger: ACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCAT...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGGAGCAGATGTTTTTGTaGCCGCAGAATGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKEQMFL*PQNGRR
Trigger: CCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTC...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGGAAAATGGTCCAGGTaGGGCCCTAGGGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: LPYAGLARSCMQSEEVLRGKWSR*GPREIG
Trigger: TCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC...CCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGGAAAATGGTCCAGGTaGGGCCCTAGGGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRGKWSR*GPREIG
Trigger: TCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGGGCTGCTGGGTGCCTTaGTTTGGAATGCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKGCWVP*FGMQSL
Trigger: CAGACTCTGCATTCCAAACCAAGGCACCCAGCAGCC...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCATCAAAGACCATGACAACCATCTaGAAACAGGCGTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGGPHCLSLRDRDPISSKTMTTI*KQASQP
Trigger: AGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGT...CTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCCCGCACACCAGCGGCTaGGAGGAAGCCGGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLPHTSG*EEAGVG
Trigger: ACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGG...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGTCAGCCTCTGCCTGTTaGGCTTCACAGCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: APLCWLGTFMHAKRGGFASASAC*ASQPES
Trigger: CGATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGA...CGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGATTGGAGGCGTCTCCCTaGTCGTATGCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRLEASP*SYAAPS
Trigger: TGAAGGTGCTGCATACGATCAGGGAGACGCCTCCAA...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp GCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGTTGGAGGCGTCTCCCTaGTCGTATGCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: APLCWLGTFMHAKRGGFALEASP*SYAAPS
Trigger: TGAAGGTGCTGCATACGATCAGGGAGACGCCTCCAA...CGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGTTGGAGGCGTCTCCCTaGTCGTATGCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQLEASP*SYAAPS
Trigger: TGAAGGTGCTGCATACGATCAGGGAGACGCCTCCAA...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGTTGTCGTTGTTGATTaGCAGCGCACACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRVVVVD*QRTQAC
Trigger: GCAGGCCTGTGTGCGCTGTCAATCAACAACGACAAC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CCTCTCCACCTGGGTCACTGGCGCAGCAGTAAGAGTTCTAACGGGCAACTCAGCAGGCTCTGCCCTGGTTaGACATTTCTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: PLHLGHWRSSKSSNGQLSRLCPG*TFLSLG
Trigger: CCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCT...GCTGAGTTGCCCGTTAGAACTCTTACTGCTGCGCCAGTGACCCAGGTGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGACTAAGGGGCAGTCGTaGGAGGCAGAGTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: LPYAGLARSCMQSEEVLRTKGQS*EAESKI
Trigger: GATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT...CCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCTGCGCCGTATGTCTaGGTGACTAAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LAPLCWLGTFMHAKRGGFAAPYV*VTKGQS
Trigger: CGACTGCCCCTTAGTCACTCAGACATACGGCGCAGC...AAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGAAGTCTCGTTGGGGATaGAGGCACGTAAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWKSRWG*RHVSTF
Trigger: AAAGGTACTTACGTGCCTTCATCCCCAACGAGACTT...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR TCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTGCGGGAAGCCGAGGCTaGGCGAGGAAGACAATTCCC +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPAGSRG*ARKTIP
Trigger: GGGAATTGTCTTCCTCGCTCAGCCTCGGCTTCCCGC...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGCTCACAACAGCCCTGTaGGGTAGGGATGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LPYAGLARSCMQSEEVLRLTTAL*GRDESH
Trigger: ATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAG...CCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGGTCTCCCTGATCGTATaGAGCACCTTCATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKVSLIV*STFMSR
Trigger: TCGGGACATGAAGGTGCTGCATACGATCAGGGAGAC...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCAGCGCACACAGGCCTaGAGGGTTTGGAGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSQRTQA*RVWRRL
Trigger: GAGACGCCTCCAAACCCTGCAGGCCTGTGTGCGCTG...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGAATGGTATCGAAGACCTaGACCTCTCCGATGGTCGCG +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRMVSKT*TSPMVA
Trigger: CGCGACCATCGGAGAGGTGCAGGTCTTCGATACCAT...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGATGGTATCGAAGACCTaGACCTCTCCGATGGTCGCG +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQMVSKT*TSPMVA
Trigger: CGCGACCATCGGAGAGGTGCAGGTCTTCGATACCAT...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCATGGTATCGAAGACCTaGACCTCTCCGATGGTCGCG +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVMVSKT*TSPMVA
Trigger: CGCGACCATCGGAGAGGTGCAGGTCTTCGATACCAT...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAGGCCAGGGAGCAGATaGTCACGCACCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRRPGSR*SRTSLL
Trigger: GAGTAAAGAGGTGCGTGAGCATCTGCTCCCTGGCCT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GCCTTGACAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGTCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALTSRPTVRDATVSLRTRSSLKM*TVSVLL
Trigger: CAGCAACACTGAGACCGTGCACATCTTCAAACTCGA...CCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCTGCCGTCCAGCCGGTaGTGCTTCATCAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSLPSSR*CFIRAH
Trigger: GTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAG...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp AAACGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCCTTCTAGCTCCCCTATaGTGGCTTGGCACGTTCATG +
Preference number: 4 (lower is better)
Translates to: KRRENGPGGALGRSDFCPLLAPL*WLGTFM
Trigger: CATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG...GGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR GCA 90 bp GGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAGTCCCAGCTGAAGTCTaGCCAGCACACCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTFMHAKRGGFAGFTKQLVPAEV*PAHLVG
Trigger: GCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGAC...TAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCATGCCTCATCTTACAGTaGGGGAAGCCGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHACLILQ*GKPRLS
Trigger: GCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCA...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp ATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCTACCCTCCACAATGGCTaGTCAGCAAACACAGAAATC +
Preference number: 4 (lower is better)
Translates to: IGLLSQLKSAQHTWWAAPTLHNG*SANTEI
Trigger: GATTTCTGTGTTTGCTGAGCAGCCATTGTGGAGGGT...AGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCGGCTTTTCCTGCAGCTaGGCCGTATGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVGFSCS*AVCLSD
Trigger: GTCACTCAGACATACGGCGCAGCTGCAGGAAAAGCC...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382384.6
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGTGGCCACTAGGCTGCTaGAGAACAATCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: SRWGPREIGLLSQLKSAQWPLGC*RTISLQ
Trigger: TTGTAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCA...CTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp CTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCATCAAAGATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGGPHCLSLRDRDPISSKMSRML*MYRDSS
Trigger: GGAGGAGTCCCTGTACATCCACAACATTCGGGACAT...CTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAGATGGTCGCGCTCCCTaGGTACGCCAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHADGRAP*VRQVAV
Trigger: AACTGCTACTTGGCGTACCCAGGGAGCGCGACCATC...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGAGCAGATGTTTTTGTaGCCGCAGAATGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQREQMFL*PQNGRR
Trigger: CCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCACAGGTGGCTGGAAAGTaGCTTCTAGCTCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSQVAGK*LLAPLC
Trigger: GCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTG...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp AGGCCGCCAGTGAGGCTGGGACTCATAGGTTCGAGCAGAGGAAGAGGAGCTGGTCTGGGTGCCTTGGTTTaGAATGCAGAGTCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: RPPVRLGLIGSSRGRGAGLGALV*NAESEV
Trigger: TACCTCAGACTCTGCATTCCAAACCAAGGCACCCAG...ACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCTCACTGGCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCACAAGACGCAGGCGTaGGTCAAGGCTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSHKTQA*VKAACC
Trigger: GCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTG...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCGCACAGGGCTTCCCGTaGTCTGCAGGGAACGCACCT +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLAQGFP*SAGNAP
Trigger: AGGTGCGTTCCCTGCAGACCACGGGAAGCCCTGTGC...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCATTGGAGGCGTCTCCCTaGTCGTATGCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHALEASP*SYAAPS
Trigger: TGAAGGTGCTGCATACGATCAGGGAGACGCCTCCAA...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTGTTGTCGTTGTTGATTaGCAGCGCACACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGVVVVD*QRTQAC
Trigger: GCAGGCCTGTGTGCGCTGTCAATCAACAACGACAAC...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGAGCAGTTGTCGTTGTTaGTTGACAGCGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQSSCRC*LTAHTG
Trigger: GCCTGTGTGCGCTGTCAATCAACAACGACAACTGCT...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGAGGCTCTGCCCTGGTTaGACATTTCTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRRLCPG*TFLSLG
Trigger: CCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCT...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTACTAAGGGGCAGTCGTaGGAGGCAGAGTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGTKGQS*EAESKI
Trigger: GATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGGCTGCGCCGTATGTCTaGGTGACTAAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLAAPYV*VTKGQS
Trigger: CGACTGCCCCTTAGTCACTCAGACATACGGCGCAGC...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: APLCWLGTFMHAKRGGFAAQSPL*SQCSLL
Trigger: GAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGC...CGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRAQSPL*SQCSLL
Trigger: GAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGC...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVAQSPL*SQCSLL
Trigger: GAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGC...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp AAAGTTCAATCAGCCCACTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCCCCGCTCTTGTTTATaGTCCAGAGCCGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: KVQSAHLHLCLMQMLCVPPRSCL*SRAGAP
Trigger: GGGTGCCCCGGCTCTGGAGCATAAACAAGAGCGGGG...CGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAACCGTCCAGCCGGTGCTaGTTCATCAGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEPSSRC*FIRAHS
Trigger: CGAGTGTGCCCTGATGAAGCAGCACCGGCTGGACGG...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCTGGTCGTTTCCAGACTaGCGTCCAGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVWSFPD*RPAGAA
Trigger: AGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCA...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGAGGCTTGGCACGTTCATaGATGCAAAGCGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRGLARS*MQSEEV
Trigger: AACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCC...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTCCTCGACACTTTGGCTaGTGGGTGCCTTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGPRHFG*WVPWFG
Trigger: TCCAAACCAAGGCACCCAGCAGCCAAAGTGTCGAGG...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTTAATGCCACTTAAATaGCCTCGACACTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWLMPLK*PRHFGC
Trigger: GCAGCCAAAGTGTCGAGGGCATTTAAGTGGCATTAA...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGTCTCGACCAAGAATCTaGAGTCCTCCTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APLCWLGTFMHAKRGGFASRPRI*SPPPSS
Trigger: AGAGGAGGGAGGAGGACTGCAGATTCTTGGTCGAGA...CGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGGGTGGTGGGCTCCTCTaGGGGTTTTTCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRGGGLL*GFFFHS
Trigger: ACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACC...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGAGGTGGTGGGCTCCTCTaGGGGTTTTTCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRGGGLL*GFFFHS
Trigger: ACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACC...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGGTGGTGGGCTCCTCTaGGGGTTTTTCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRGGGLL*GFFFHS
Trigger: ACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTACCCGGTCCAGGTGGTaGGCTCCTCTGGGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCTRSRW*APLGVF
Trigger: AAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGT...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAAGTACCCGGTCCAGGTaGTGGGCTCCTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCESTRSR*WAPLGV
Trigger: AACCCCCAGAGGAGCCCACCACCTGGACCGGGTACT...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGGCGAAGGCTCTGCCCTaGTTGAACATTTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKAKALP*LNISVT
Trigger: AGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGC...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCTTTGTGGCCGCAGAATaGCAGGCGGACCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVFVAAE*QADRGE
Trigger: TTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAA...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTTTTGTGGCCGCAGAATaGCAGGCGGACCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSFVAAE*QADRGE
Trigger: TTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAA...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp AAACGGAGGGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCTCCCCTATGCTGGCTTaGCACGTTCATGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: KRRENGPGGALGRSDFCPSPMLA*HVHACK
Trigger: TTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGA...GGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGCCTGCGGAACATGTaGTCATGGGGTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLCLRNM*SWGGDS
Trigger: GCTGTCCCCACCCCATGACCACATGTTCCGCAGGCA...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR TCA 90 bp CTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCTAAAGGACTGTCGTaGGCCGGAATCATGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LPYAGLARSCMQSEEVLRAKGLS*AGIMFA
Trigger: TGCAAACATGATTCCGGCTCACGACAGTCCTTTAGC...CCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAGCTAAAGGACTGTCGTaGGCCGGAATCATGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSAKGLS*AGIMFA
Trigger: TGCAAACATGATTCCGGCTCACGACAGTCCTTTAGC...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGATCACAGTCTCGAGTTTaGAGATGTGCACGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRSQSRV*RCARSQ
Trigger: CTGAGACCGTGCACATCTTCAAACTCGAGACTGTGA...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCAGCTGGTGGAGGCCATaGGCACTTTCCCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVSWWRP*ALSRST
Trigger: GGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCT...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGAGCTGGTGGAGGCCATaGGCACTTTCCCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLSWWRP*ALSRST
Trigger: GGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCT...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTACGCCGTATGTCTGAGTaGCTAAGGGGCAGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: GTFMHAKRGGFAGFTKQLRRMSE*LRGSRE
Trigger: CTCACGACTGCCCCTTAGTCACTCAGACATACGGCG...TAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCCGCCGTATGTCTGAGTaGCTAAGGGGCAGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEARRMSE*LRGSRE
Trigger: CTCACGACTGCCCCTTAGTCACTCAGACATACGGCG...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAGACTTCTGTCCCAGCTaGAGTCTGCCCAGCACACCT +
Preference number: 4 (lower is better)
Translates to: GTFMHAKRGGFAGFTKQLDFCPS*SLPSTP
Trigger: AGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTC...TAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GCAGGTGGCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATCGATGGCCACTAGGCTaGTGGAGAACAATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: AGGWKVASSSPMLAWHVHRWPLG*WRTISL
Trigger: TAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCATCG...ATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCCGATGGCCACTAGGCTaGTGGAGAACAATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVRWPLG*WRTISL
Trigger: TAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCATCG...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGCGATGGCCACTAGGCTaGTGGAGAACAATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRRWPLG*WRTISL
Trigger: TAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCATCG...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCACGATGGCCACTAGGCTaGTGGAGAACAATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSRWPLG*WRTISL
Trigger: TAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCATCG...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAGTCTCCCTGATCGTATaGAGCACCTTCATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHAVSLIV*STFMSR
Trigger: TCGGGACATGAAGGTGCTGCATACGATCAGGGAGAC...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTATGGTATCGAAGACCTaGACCTCTCCGATGGTCGCG +
Preference number: 4 (lower is better)
Translates to: LAPLCWLGTFMHAKRGGFMVSKT*TSPMVA
Trigger: CGCGACCATCGGAGAGGTGCAGGTCTTCGATACCAT...AAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGAAGTTTAGTTCCACTTaGGTCAAAGGCCAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LPYAGLARSCMQSEEVLRKFSST*VKGQCR
Trigger: GCGGCACTGGCCTTTGACGCAAGTGGAACTAAACTT...CCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAAGTTTAGTTCCACTTaGGTCAAAGGCCAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRKFSST*VKGQCR
Trigger: GCGGCACTGGCCTTTGACGCAAGTGGAACTAAACTT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTAGGCCAGGGAGCAGATaGTCACGCACCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: LAPLCWLGTFMHAKRGGFRPGSR*SRTSLL
Trigger: GAGTAAAGAGGTGCGTGAGCATCTGCTCCCTGGCCT...AAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTGCACGGTCTCAGTGTTaGTGGAGGCGGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPARSQC*WRRRGT
Trigger: TGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGC...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAGTAAGTACCTTTTCCTaGAGCTGCGCCGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSVSTFS*SCAVCL
Trigger: CAGACATACGGCGCAGCTGCAGGAAAAGGTACTTAC...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR GCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTAGAATCATGGGCGGGTaGTCGCTGTCCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPRIMGG*SLSSSR
Trigger: CCTGGATGAGGACAGCGAGCACCCGCCCATGATTCT...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLEASVL*SPGQRS
Trigger: TGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTC...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCTGGCACGTTCATGCATaGAAAGCGAGGAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVWHVHA*KARRFC
Trigger: GCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCA...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGAACGCAGAACTGGAAATaGAGCTCACTCTTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGTQNWK*SSLFGD
Trigger: GTCACCAAAGAGTGAGCTGCATTTCCAGTTCTGCGT...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQMSRML*MYRDSS
Trigger: GGAGGAGTCCCTGTACATCCACAACATTCGGGACAT...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRMSRML*MYRDSS
Trigger: GGAGGAGTCCCTGTACATCCACAACATTCGGGACAT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSMSRML*MYRDSS
Trigger: GGAGGAGTCCCTGTACATCCACAACATTCGGGACAT...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCGATGGTCGCGCTCCCTaGGTACGCCAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLDGRAP*VRQVAV
Trigger: AACTGCTACTTGGCGTACCCAGGGAGCGCGACCATC...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCGGTCTCAGTGTTGCTaGAGGCGGAGAGGAACATGC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSRSQCC*RRRGTC
Trigger: GCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCG...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCGGTCTCAGTGTTGCTaGAGGCGGAGAGGAACATGC +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPRSQCC*RRRGTC
Trigger: GCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCG...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAACCCGGTCCAGGTGGTaGGCTCCTCTGGGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCETRSRW*APLGVF
Trigger: AAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGT...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCGAAGGCTCTGCCCTaGTTGAACATTTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LPYAGLARSCMQSEEVLRAKALP*LNISVT
Trigger: AGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGC...CCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAGCGAAGGCTCTGCCCTaGTTGAACATTTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSAKALP*LNISVT
Trigger: AGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGC...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTATGGCAGGCGGACCGTaGCGAAGGCTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVMAGGP*RRLCPG
Trigger: ACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCAT...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCAGTCCGAAGAATCATaGGCGGGTGCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVQSEES*AGARCP
Trigger: AGGACAGCGAGCACCCGCCCATGATTCTTCGGACTG...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTCAGTCCGAAGAATCATaGGCGGGTGCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCQSEES*AGARCP
Trigger: AGGACAGCGAGCACCCGCCCATGATTCTTCGGACTG...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCCAACGGCAGGTGGCTaGAAAGTGGCTTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVPTAGG*KVASSS
Trigger: GGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGG...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAGTTCTGTGCTTTCCTaGGCATGGGAGGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRSSVLS*AWEELQ
Trigger: TTGTAGCTCCTCCCATGCCCAGGAAAGCACAGAACT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCTAGAGAGAGCCCTCTaGCCTTGCACCACAAGACGC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSLERAL*PCTTRR
Trigger: GCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTCTAG...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp GGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAGTGGCTCCCAGGAGATaGAGTGCACGGTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GTFMHAKRGGFAGFTKQLVAPRR*SARSGS
Trigger: AGAACCTGACCGTGCACTCCATCTCCTGGGAGCCAC...TAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTCAGCGGCCTCCCTCTGTCCCCGTCACTCCTGAGCATGTCTGAGGCCGCCAGTAAGACAAAAGAGACCTaGCAAAGGAAATTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LSGLPLSPSLLSMSEAASKTKET*QRKFES
Trigger: AGACTCAAATTTCCTTTGCCAGGTCTCTTTTGTCTT...ACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp TCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGGTTCCATCCAGCTCTTaGTCCCATTGTTTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SRWGPREIGLLSQLKSAQVPSSS*SHCFRD
Trigger: ATCTCTAAAACAATGGGACCAAGAGCTGGATGGAAC...CTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAAACAAACACCTGCCTaGGCGACACGCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEAKQTPA*ATRRAQ
Trigger: CTGTGCCCTGCGTGTCGCCCAGGCAGGTGTTTGTTT...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR TCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTCAGCCTCTGCCTGTTaGGCTTCACAGCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLSASAC*ASQPES
Trigger: CGATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGA...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTTCAGCCTCTGCCTGTTaGGCTTCACAGCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPSASAC*ASQPES
Trigger: CGATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGA...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCGTTGTCGTTGTTGATTaGCAGCGCACACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVVVVVD*QRTQAC
Trigger: GCAGGCCTGTGTGCGCTGTCAATCAACAACGACAAC...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CATCTGGAAACAGGCGTCCCAGCCTTCCTCGGTTCAAAAACCCCAGCCTGCAAATCACAGTCTCGAGTTTaGAGATGTGCACGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HLETGVPAFLGSKTPACKSQSRV*RCARSQ
Trigger: CTGAGACCGTGCACATCTTCAAACTCGAGACTGTGA...TTTGCAGGCTGGGGTTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCACTAAGGGGCAGTCGTaGGAGGCAGAGTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVTKGQS*EAESKI
Trigger: GATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTACTAAGGGGCAGTCGTaGGAGGCAGAGTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPTKGQS*EAESKI
Trigger: GATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAAGTCTCGTTGGGGATaGAGGCACGTAAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRKSRWG*RHVSTF
Trigger: AAAGGTACTTACGTGCCTTCATCCCCAACGAGACTT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR GCA 90 bp ATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCTAGCCGGAATCATGTTTaGAGCTCTCAAATTAATGGT +
Preference number: 4 (lower is better)
Translates to: IGLLSQLKSAQHTWWAAPSRNHV*SSQING
Trigger: ACCATTAATTTGAGAGCTGCAAACATGATTCCGGCT...AGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAAGGCCAGGGAGCAGATaGTCACGCACCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: GTFMHAKRGGFAGFTKQLRPGSR*SRTSLL
Trigger: GAGTAAAGAGGTGCGTGAGCATCTGCTCCCTGGCCT...TAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCATGAACGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGATCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DPLCATPRFPYALGIMYRSSLKM*TVSVLL
Trigger: CAGCAACACTGAGACCGTGCACATCTTCAAACTCGA...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRSSLKM*TVSVLL
Trigger: CAGCAACACTGAGACCGTGCACATCTTCAAACTCGA...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCCGTCCAGCCGGTGCTaGTTCATCAGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVPSSRC*FIRAHS
Trigger: CGAGTGTGCCCTGATGAAGCAGCACCGGCTGGACGG...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTTGGTCGTTTCCAGACTaGCGTCCAGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLRSKFIAAMHKVLCEASWSFPD*RPAGAA
Trigger: AGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCA...ACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEEASVL*SPGQRS
Trigger: TGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTC...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCGGCTTTTCCTGCAGCTaGGCCGTATGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEAGFSCS*AVCLSD
Trigger: GTCACTCAGACATACGGCGCAGCTGCAGGAAAAGCC...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382384.6
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTGGCTTTTCCTGCAGCTaGGCCGTATGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSGFSCS*AVCLSD
Trigger: GTCACTCAGACATACGGCGCAGCTGCAGGAAAAGCC...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382384.6
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTCAAAAACAAACACCTaGCTGGGCGACACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLSKTNT*LGDTQG
Trigger: GCCCTGCGTGTCGCCCAGGCAGGTGTTTGTTTTTGA...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGCCACAGGCAGAATCTaGGCTCAAAAACAAACACCT +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRATGRI*AQKQTP
Trigger: AGGTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR CCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTGGCCACTAGGCTGCTaGAGAACAATCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRWPLGC*RTISLQ
Trigger: TTGTAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCA...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTGGTGGTGGGCTCCTCTaGGGGTTTTTCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LAPLCWLGTFMHAKRGGFGGGLL*GFFFHS
Trigger: ACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACC...AAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAAAAGTACCCGGTCCAGGTaGTGGGCTCCTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: ACKARRFCGLHQTVNFGKSTRSR*WAPLGV
Trigger: AACCCCCAGAGGAGCCCACCACCTGGACCGGGTACT...TTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAGCGAAGGCTCTGCCCTaGTTGAACATTTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHAAKALP*LNISVT
Trigger: AGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGC...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCGAGCAGATGTTTTTGTaGCCGCAGAATGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLEQMFL*PQNGRR
Trigger: CCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTC...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGTCCAAGATCTCATTaGTCGTTTCCAGACTGCCGT +
Preference number: 4 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSSPRSH*SFPDCR
Trigger: ACGGCAGTCTGGAAACGACCAATGAGATCTTGGACT...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAGTCCAAGATCTCATTaGTCGTTTCCAGACTGCCGT +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVSPRSH*SFPDCR
Trigger: ACGGCAGTCTGGAAACGACCAATGAGATCTTGGACT...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAACAGTCCGAAGAATCATaGGCGGGTGCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEQSEES*AGARCP
Trigger: AGGACAGCGAGCACCCGCCCATGATTCTTCGGACTG...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTCCCCTATGCTGGCTTaGCACGTTCATGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGSPMLA*HVHACK
Trigger: TTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGA...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTCTCCACCTGGGTCACTaGCGCAGCAGTAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCLHLGH*RSSKSS
Trigger: AGAACTCTTACTGCTGCGCCAGTGACCCAGGTGGAG...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCAGCAGTTGTCGTTGTTaGTTGACAGCGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLSSCRC*LTAHTG
Trigger: GCCTGTGTGCGCTGTCAATCAACAACGACAACTGCT...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCAGGCTCTGCCCTGGTTaGACATTTCTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLRLCPG*TFLSLG
Trigger: CCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCT...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCAGGCTCTGCCCTGGTTaGACATTTCTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVRLCPG*TFLSLG
Trigger: CCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCT...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGAGGCTCTGCCCTGGTTaGACATTTCTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLRLCPG*TFLSLG
Trigger: CCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCT...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTGCTGCGCCGTATGTCTaGGTGACTAAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVAAPYV*VTKGQS
Trigger: CGACTGCCCCTTAGTCACTCAGACATACGGCGCAGC...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGCACGGTCTCAGTGTTaGTGGAGGCGGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: RLRSKFIAAMHKVLCEASARSQC*WRRRGT
Trigger: TGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGC...ACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTGGCTTGGCACGTTCATaGATGCAAAGCGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPGLARS*MQSEEV
Trigger: AACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCC...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp TCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCCTTTCAAGTTCATTTaGTGCCTGAAAGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SRWGPREIGLLSQLKSAQPFKFI*CLKERF
Trigger: AAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGG...CTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp TCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGAGGGTAAATAGTTTTTaGCTTTTCCCTTCTATCCGT +
Preference number: 4 (lower is better)
Translates to: SRWGPREIGLLSQLKSAQRVNSF*LFPSIR
Trigger: ACGGATAGAAGGGAAAAGGCAAAAACTATTTACCCT...CTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTTGCAGATGTTGTGTGTaGCGCACACCAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVCRCCV*RTPAAG
Trigger: CCCAGCCGCTGGTGTGCGGCACACACAACATCTGCA...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTTGTGTAGGCTTTTCCTaGAGCTGCGCCGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCCVGFS*SCAVCL
Trigger: CAGACATACGGCGCAGCTGCAGGAAAAGCCTACACA...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382384.6
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACAATCTTCGCCAGGTTCATGGCTaGGCGCGCGGCGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VKMMYFLSVMELDYHYNLRQVHG*ARGEWA
Trigger: GGCCCACTCGCCGCGCGCCCAGCCATGAACCTGGCG...AAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGATGGTCGCGCTCCCTaGGTACGCCAAGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RLRSKFIAAMHKVLCEASDGRAP*VRQVAV
Trigger: AACTGCTACTTGGCGTACCCAGGGAGCGCGACCATC...ACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCGGTGGTGGGCTCCTCTaGGGGTTTTTCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEAGGGLL*GFFFHS
Trigger: ACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACC...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGAGCAGATGTTTTTGTaGCCGCAGAATGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEEQMFL*PQNGRR
Trigger: CCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTC...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCCTAGCTCCCCTATGCTaGCTTGGCACGTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEALAPLC*LGTFMH
Trigger: ATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCCTAGCTCCCCTATGCTaGCTTGGCACGTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLLAPLC*LGTFMH
Trigger: ATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTAGCACACGTTCTGTTTaGTTCAGGGTCCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPSTRSV*FRVPLH
Trigger: GTGGAGAGGGACCCTGAACCAAACAGAACGTGTGCT...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCAGGGTCTTGATTCGCTaGAGCCTCAGGAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLRVLIR*SLRSIS
Trigger: GGAAATGCTCCTGAGGCTCCAGCGAATCAAGACCCT...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCATCTCCACATGGCTATaGCCACAGGCAGAATCTGCG +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLISTWL*PQAESA
Trigger: CGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGAT...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR TCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAAGCAGTTGTCGTTGTTaGTTGACAGCGCACACAGGC +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCESSCRC*LTAHTG
Trigger: GCCTGTGTGCGCTGTCAATCAACAACGACAACTGCT...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTGCTAAAGGACTGTCGTaGGCCGGAATCATGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSAKGLS*AGIMFA
Trigger: TGCAAACATGATTCCGGCTCACGACAGTCCTTTAGC...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCTCACAGTCTCGAGTTTaGAGATGTGCACGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVSQSRV*RCARSQ
Trigger: CTGAGACCGTGCACATCTTCAAACTCGAGACTGTGA...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp ATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCACGCCGTATGTCTGAGTaGCTAAGGGGCAGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: MHAKRGGFAGFTKQLILARRMSE*LRGSRE
Trigger: CTCACGACTGCCCCTTAGTCACTCAGACATACGGCG...TGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp GCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAAACTGTCTCAGCCTGCGTaGCCGGGATCCCATTTCATC +
Preference number: 4 (lower is better)
Translates to: ACKARRFCGLHQTVNFGKLSQPA*PGSHFI
Trigger: GATGAAATGGGATCCCGGTCACGCAGGCTGAGACAG...TTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGACAATCTCTCTACAATaGACACATCTTCCGTATCGG +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRTISLQ*THLPYR
Trigger: CCGATACGGAAGATGTGTGCATTGTAGAGAGATTGT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTCGATGGCCACTAGGCTaGTGGAGAACAATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCRWPLG*WRTISL
Trigger: TAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCATCG...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGTCTCCCTGATCGTATaGAGCACCTTCATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEVSLIV*STFMSR
Trigger: TCGGGACATGAAGGTGCTGCATACGATCAGGGAGAC...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTAAGTTTAGTTCCACTTaGGTCAAAGGCCAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCKFSST*VKGQCR
Trigger: GCGGCACTGGCCTTTGACGCAAGTGGAACTAAACTT...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTTCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LAPLCWLGTFMHAKRGGFSSLKM*TVSVLL
Trigger: CAGCAACACTGAGACCGTGCACATCTTCAAACTCGA...AAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTAGAATCATGGGCGGGTaGTCGCTGTCCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVRIMGG*SLSSSR
Trigger: CCTGGATGAGGACAGCGAGCACCCGCCCATGATTCT...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAAAGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ACKARRFCGLHQTVNFGKEASVL*SPGQRS
Trigger: TGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTC...TTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTTGGCACGTTCATGCATaGAAAGCGAGGAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSWHVHA*KARRFC
Trigger: GCAAAACCTCCTCGCTTTGCATGCATGAACGTGCCA...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCGGTCTCAGTGTTGCTaGAGGCGGAGAGGAACATGC +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVRSQCC*RRRGTC
Trigger: GCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCG...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCGGATCTTCTGAATTGTaGCTAGCGAGCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVGSSEL*LASRCF
Trigger: AAAACATCTGCTCGCTAGCCACAATTCAGAAGATCC...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGGGATCTTCTGAATTGTaGCTAGCGAGCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRGSSEL*LASRCF
Trigger: AAAACATCTGCTCGCTAGCCACAATTCAGAAGATCC...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGGTGAACATCTCCACATaGCTATGGCCACAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLVNIST*LWPQAE
Trigger: TTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCAC...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR TCA 90 bp GCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAAATCAGCCTCTGCCTGTTaGGCTTCACAGCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: ACKARRFCGLHQTVNFGKSASAC*ASQPES
Trigger: CGATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGA...TTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTTCAGCCTCTGCCTGTTaGGCTTCACAGCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVSASAC*ASQPES
Trigger: CGATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGA...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTTTGGAGGCGTCTCCCTaGTCGTATGCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVLEASP*SYAAPS
Trigger: TGAAGGTGCTGCATACGATCAGGGAGACGCCTCCAA...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp CGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGCACAAAGTCCTCTGTaGAGCCAGTGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RLRSKFIAAMHKVLCEASAQSPL*SQCSLL
Trigger: GAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGC...ACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR TCA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCACAGACAAGCAGGTTTTaGAGGAAAAGTTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHAQTSRF*RKSSIS
Trigger: GCTGATTGAACTTTTCCTTCAAAACCTGCTTGTCTG...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTAGGGAAGTACATGCGTaGACATCTCCACATGGCTAT +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPREVHA*TSPHGY
Trigger: ATAGCCATGTGGAGATGTTCACGCATGTACTTCCCT...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR GCA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAGCCGGAATCATGTTTaGAGCTCTCAAATTAATGGT +
Preference number: 4 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRSRNHV*SSQING
Trigger: ACCATTAATTTGAGAGCTGCAAACATGATTCCGGCT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTTGTGTAGGCTTTTCCTaGAGCTGCGCCGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: RLRSKFIAAMHKVLCEASCVGFS*SCAVCL
Trigger: CAGACATACGGCGCAGCTGCAGGAAAAGCCTACACA...ACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382384.6
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp ACTGAAGTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACATGGCAGGCGGACCGTaGCGAAGGCTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TEVKMMYFLSVMELDYHYMAGGP*RRLCPG
Trigger: ACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCAT...GTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCAGTCCAAGATCTCATTaGTCGTTTCCAGACTGCCGT +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLSPRSH*SFPDCR
Trigger: ACGGCAGTCTGGAAACGACCAATGAGATCTTGGACT...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCAGTCCAAGATCTCATTaGTCGTTTCCAGACTGCCGT +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVSPRSH*SFPDCR
Trigger: ACGGCAGTCTGGAAACGACCAATGAGATCTTGGACT...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTGTCTCCCTGATCGTATaGAGCACCTTCATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVVSLIV*STFMSR
Trigger: TCGGGACATGAAGGTGCTGCATACGATCAGGGAGAC...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp ATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCACTTCTAGCTCCCCTATaGTGGCTTGGCACGTTCATG +
Preference number: 4 (lower is better)
Translates to: MHAKRGGFAGFTKQLILALLAPL*WLGTFM
Trigger: CATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG...TGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp ACTGAAGTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACGTCCCAGCTGAAGTCTaGCCAGCACACCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TEVKMMYFLSVMELDYHYVPAEV*PAHLVG
Trigger: GCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGAC...GTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAATGGCCACTAGGCTGCTaGAGAACAATCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEWPLGC*RTISLQ
Trigger: TTGTAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCA...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp GTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACAATCTTCCTGCACCTCTCCGATaGTCGCGCTCCCTGGGTACG +
Preference number: 4 (lower is better)
Translates to: VKMMYFLSVMELDYHYNLPAPLR*SRSLGT
Trigger: CGTACCCAGGGAGCGCGACCATCGGAGAGGTGCAGG...AAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp ATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAGCTAAAGGACTGTCGTaGGCCGGAATCATGTTTGCA +
Preference number: 4 (lower is better)
Translates to: MHAKRGGFAGFTKQLILAAKGLS*AGIMFA
Trigger: TGCAAACATGATTCCGGCTCACGACAGTCCTTTAGC...TGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp GCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAAATCACAGTCTCGAGTTTaGAGATGTGCACGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ACKARRFCGLHQTVNFGKSQSRV*RCARSQ
Trigger: CTGAGACCGTGCACATCTTCAAACTCGAGACTGTGA...TTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGACAATCTCTCTACAATaGACACATCTTCCGTATCGG +
Preference number: 4 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLTISLQ*THLPYR
Trigger: CCGATACGGAAGATGTGTGCATTGTAGAGAGATTGT...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTACAATCTCTCTACAATaGACACATCTTCCGTATCGG +
Preference number: 4 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSTISLQ*THLPYR
Trigger: CCGATACGGAAGATGTGTGCATTGTAGAGAGATTGT...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCACAATCTCTCTACAATaGACACATCTTCCGTATCGG +
Preference number: 4 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLTISLQ*THLPYR
Trigger: CCGATACGGAAGATGTGTGCATTGTAGAGAGATTGT...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAAAAAGTTTAGTTCCACTTaGGTCAAAGGCCAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ACKARRFCGLHQTVNFGKKFSST*VKGQCR
Trigger: GCGGCACTGGCCTTTGACGCAAGTGGAACTAAACTT...TTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR GCA 90 bp CGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTTCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RLRSKFIAAMHKVLCEASSSLKM*TVSVLL
Trigger: CAGCAACACTGAGACCGTGCACATCTTCAAACTCGA...ACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTGTAAGTACCTTTTCCTaGAGCTGCGCCGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVVSTFS*SCAVCL
Trigger: CAGACATACGGCGCAGCTGCAGGAAAAGGTACTTAC...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTGGATCTTCTGAATTGTaGCTAGCGAGCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPGSSEL*LASRCF
Trigger: AAAACATCTGCTCGCTAGCCACAATTCAGAAGATCC...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGGATCTTCTGAATTGTaGCTAGCGAGCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCGSSEL*LASRCF
Trigger: AAAACATCTGCTCGCTAGCCACAATTCAGAAGATCC...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp ATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCATCCCCTATGCTGGCTTaGCACGTTCATGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: MHAKRGGFAGFTKQLILASPMLA*HVHACK
Trigger: TTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGA...TGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CCA 90 bp GTAAATAGTTTTTGCCTTTTCCCTTCTATCCGTAACTTCCACCACTCCATAGATTGGGCAACGGGAAAGTaGAGGCGGGTAACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VNSFCLFPSIRNFHHSIDWATGK*RRVTLH
Trigger: GTGGAGGGTTACCCGCCTCCACTTTCCCGTTGCCCA...ATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR TCA 90 bp GTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACAATCTTGCTGCGCCGTATGTCTaGGTGACTAAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: VKMMYFLSVMELDYHYNLAAPYV*VTKGQS
Trigger: CGACTGCCCCTTAGTCACTCAGACATACGGCGCAGC...AAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR TCA 90 bp CGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTATCTTCCGTATCGGCTaGAATCACAAAGGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RLRSKFIAAMHKVLCEASIFRIG*NHKGKY
Trigger: GTACTTCCCTTTGTGATTTCAGCCGATACGGAAGAT...ACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484262.1
CDS-3UTR GCA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAACAATCTCTCTACAATaGACACATCTTCCGTATCGG +
Preference number: 4 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCETISLQ*THLPYR
Trigger: CCGATACGGAAGATGTGTGCATTGTAGAGAGATTGT...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp TGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCAGCCGGAATCATGTTTaGAGCTCTCAAATTAATGGT +
Preference number: 4 (lower is better)
Translates to: CHPLPRLRSKFIAAMHKVSRNHV*SSQING
Trigger: ACCATTAATTTGAGAGCTGCAAACATGATTCCGGCT...GACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTTGGCCACTAGGCTGCTaGAGAACAATCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVWPLGC*RTISLQ
Trigger: TTGTAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCA...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp TTAATTATACAAACAAAATCGCTTTCCTTTGCTCCAGCGAGTCCAGGCAACCTTAAGTTTAGTTCCACTTaGGTCAAAGGCCAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LIIQTKSLSFAPASPGNLKFSST*VKGQCR
Trigger: GCGGCACTGGCCTTTGACGCAAGTGGAACTAAACTT...AAGGTTGCCTGGACTCGCTGGAGCAAAGGAAAGCGATTTTGTTTGTATAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp GTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACAATCTTGTCCGAGGCCTCCTCTaGAACTGCCTCATCTTACAG +
Preference number: 4 (lower is better)
Translates to: VKMMYFLSVMELDYHYNLVRGLL*NCLILQ
Trigger: CTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGAC...AAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTGGATCTTCTGAATTGTaGCTAGCGAGCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVGSSEL*LASRCF
Trigger: AAAACATCTGCTCGCTAGCCACAATTCAGAAGATCC...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR GCA 90 bp GTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACAATCTTACCTTTTCCTGCAGCTaGGCCGTATGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: VKMMYFLSVMELDYHYNLTFSCS*AVCLSD
Trigger: GTCACTCAGACATACGGCGCAGCTGCAGGAAAAGGT...AAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CCA 90 bp GTAAATAGTTTTTGCCTTTTCCCTTCTATCCGTAACTTCCACCACTCCATAGATGGTAACCCTCCACAATaGCTGCTCAGCAAACACAGA +
Preference number: 4 (lower is better)
Translates to: VNSFCLFPSIRNFHHSIDGNPPQ*LLSKHR
Trigger: TCTGTGTTTGCTGAGCAGCCATTGTGGAGGGTTACC...ATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CCA 90 bp GTAAATAGTTTTTGCCTTTTCCCTTCTATCCGTAACTTCCACCACTCCATAGATTGGCCACTAGGCTGCTaGAGAACAATCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: VNSFCLFPSIRNFHHSIDWPLGC*RTISLQ
Trigger: TTGTAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCA...ATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR GCA 90 bp ACTGAAGTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACTCAAAAACCCCAGCCTaGAAAGGCAGGGTAAATAGT +
Preference number: 4 (lower is better)
Translates to: TEVKMMYFLSVMELDYHYSKTPA*KGRVNS
Trigger: ACTATTTACCCTGCCTTTGCAGGCTGGGGTTTTTGA...GTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS GCA 90 bp GCTGCCTGTGGGAGAAGCTCATCTGCTGGGGCCCATCCTCCTCACTaGCGAGCCTGGATGCGGAGGTGCTCGCTCCATGGCCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: AACGRSSSAGAHPPH*RAWMRRCSLHGQLR
Trigger: CCGGAGCTGGCCATGGAGCGAGCACCTCCGCATCCAGGCTCGGCAGTGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 90 bp CCGTCCAGCCGGTGCTGCTTCATCAGGGCACACTCGCCGCCCTCCTaGGGGTCCAGGTTGTACATGTACAGGTACCCGTCGGCGGCACCC +
Preference number: 5 (lower is better)
Translates to: PSSRCCFIRAHSPPS*GSRLYMYRYPSAAP
Trigger: GGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAGCAGCACCGGCTGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000471851.1
ENST00000484262.1
CDS-3UTR CAA 90 bp CAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCTGCACGGTCTCAGTGTaGCTGGAGGCGGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: QGHPRGSVGRGSQDVRGLCTVSV*LEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCA...GAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS GCA 90 bp GTCTCCACACAGGGCAGCCCTGCGGGCAGTACACACTGGCTGCCCTaGGGCAACAGAGCCAGCACACCACTCACCACACAGGACGCCAGG +
Preference number: 5 (lower is better)
Translates to: VSTQGSPAGSTHWLP*GNRASTPLTTQDAR
Trigger: CCTGGCGTCCTGTGTGGTGAGTGGTGTGCTGGCTCTGTTGCCGCAGGGCAGCCAGTGTGTACTGCCCGCAGGGCTGCCCTGTGTGGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS GCA 90 bp GAAGCTCATCTGCTGGGGCCCATCCTCCTCACTGCCGAGCCTGGATaGGGAGGTGCTCGCTCCATGGCCAGCTCCGGGGTCTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: EAHLLGPILLTAEPG*GGARSMASSGVFTG
Trigger: GCCAGTGAAGACCCCGGAGCTGGCCATGGAGCGAGCACCTCCGCATCCAGGCTCGGCAGTGAGGAGGATGGGCCCCAGCAGATGAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 90 bp CAGGGCACAGCGCTGAGGGTGCCTGCGGAACATGTGGTCATGGGGTaGGGACAGCCCGGGGGTCTGAGGGTCTTGATTCGCTGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: QGTALRVPAEHVVMG*GQPGGLRVLIRWSL
Trigger: GAGGCTCCAGCGAATCAAGACCCTCAGACCCCCGGGCTGTCCCCACCCCATGACCACATGTTCCGCAGGCACCCTCAGCGCTGTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS CCA 90 bp GGGAGAAGCTCATCTGCTGGGGCCCATCCTCCTCACTGCCGAGCCTaGATGCGGAGGTGCTCGCTCCATGGCCAGCTCCGGGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GRSSSAGAHPPHCRA*MRRCSLHGQLRGLH
Trigger: GTGAAGACCCCGGAGCTGGCCATGGAGCGAGCACCTCCGCATCCAGGCTCGGCAGTGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 90 bp TCTGCTGGGGCCCATCCTCCTCACTGCCGAGCCTGGATGCGGAGGTaGTCGCTCCATGGCCAGCTCCGGGGTCTTCACTGGCTAACGATG +
Preference number: 5 (lower is better)
Translates to: SAGAHPPHCRAWMRR*SLHGQLRGLHWLTM
Trigger: CATCGTTAGCCAGTGAAGACCCCGGAGCTGGCCATGGAGCGAGCACCTCCGCATCCAGGCTCGGCAGTGAGGAGGATGGGCCCCAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 90 bp GAGGGCTCTGTCTACCCTGCGTGCTGCCTGTGGGAGAAGCTCATCTaGTGGGGCCCATCCTCCTCACTGCCGAGCCTGGATGCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: EGSVYPACCLWEKLI*WGPSSSLPSLDAEV
Trigger: CACCTCCGCATCCAGGCTCGGCAGTGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGCACGCAGGGTAGACAGAGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 90 bp TGGGCCCTCCATGCCCTACGCGAGGGCTCTGTCTACCCTGCGTGCTaGCTGTGGGAGAAGCTCATCTGCTGGGGCCCATCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: WALHALREGSVYPAC*LWEKLICWGPSSSL
Trigger: CAGTGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGCACGCAGGGTAGACAGAGCCCTCGCGTAGGGCATGGAGGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 90 bp ACCTGGGCCCTCCATGCCCTACGCGAGGGCTCTGTCTACCCTGCGTaGTGCCTGTGGGAGAAGCTCATCTGCTGGGGCCCATCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TWALHALREGSVYPA*CLWEKLICWGPSSS
Trigger: TGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGCACGCAGGGTAGACAGAGCCCTCGCGTAGGGCATGGAGGGCCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 90 bp CAGCTCAGCGTCTCCACACAGGGCAGCCCTGCGGGCAGTACACACTaGCTGCCCTGCGGCAACAGAGCCAGCACACCACTCACCACACAG +
Preference number: 5 (lower is better)
Translates to: QLSVSTQGSPAGSTH*LPCGNRASTPLTTQ
Trigger: CTGTGTGGTGAGTGGTGTGCTGGCTCTGTTGCCGCAGGGCAGCCAGTGTGTACTGCCCGCAGGGCTGCCCTGTGTGGAGACGCTGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS CCA 90 bp CTCCATGCCCTACGCGAGGGCTCTGTCTACCCTGCGTGCTGCCTGTaGGAGAAGCTCATCTGCTGGGGCCCATCCTCCTCACTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: LHALREGSVYPACCL*EKLICWGPSSSLPS
Trigger: GCTCGGCAGTGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGCACGCAGGGTAGACAGAGCCCTCGCGTAGGGCATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 90 bp AGGGAAGAAAGCGACACAGCTCAGCGTCTCCACACAGGGCAGCCCTaGGGGCAGTACACACTGGCTGCCCTGCGGCAACAGAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: REESDTAQRLHTGQP*GQYTLAALRQQSQH
Trigger: GTGCTGGCTCTGTTGCCGCAGGGCAGCCAGTGTGTACTGCCCGCAGGGCTGCCCTGTGTGGAGACGCTGAGCTGTGTCGCTTTCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS CCA 90 bp CCATGGCCAGCTCCGGGGTCTTCACTGGCTAACGATGTCAGAGGGTaGGCGGGTCCGTGCTTACCTCTCATCCCGGCAGCAAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: PWPAPGSSLANDVRG*AGPCLPLIPAASGD
Trigger: GTCCCCACTTGCTGCCGGGATGAGAGGTAAGCACGGACCCGCCCACCCTCTGACATCGTTAGCCAGTGAAGACCCCGGAGCTGGCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 90 bp GAGGTCACAGGTCAAGTTCAGTCAGTCCGAAGAATCATGGGCGGGTaGTCGCTGTCCTCATCCAGGCGCAGGGCGCTGGCCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: EVTGQVQSVRRIMGG*SLSSSRRRALASSS
Trigger: GGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000471851.1
ENST00000479690.1
ENST00000484262.1
CDS CCA 90 bp CCGGGTCAGAGGTCACAGGTCAAGTTCAGTCAGTCCGAAGAATCATaGGCGGGTGCTCGCTGTCCTCATCCAGGCGCAGGGCGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PGQRSQVKFSQSEES*AGARCPHPGAGRWP
Trigger: AGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000471851.1
ENST00000479690.1
ENST00000484262.1
CDS CCA 90 bp TGGATGCGGAGGTGCTCGCTCCATGGCCAGCTCCGGGGTCTTCACTaGCTAACGATGTCAGAGGGTGGGCGGGTCCGTGCTTACCTCTCA +
Preference number: 5 (lower is better)
Translates to: WMRRCSLHGQLRGLH*LTMSEGGRVRAYLS
Trigger: TGAGAGGTAAGCACGGACCCGCCCACCCTCTGACATCGTTAGCCAGTGAAGACCCCGGAGCTGGCCATGGAGCGAGCACCTCCGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS-3UTR CAA 90 bp AACGCACCTAGCCAGCCCTGCCAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGAAGGCTCTGCCCTGGTaGAACATTTCTGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: NAPSQPCQGHPRGSVGRGKALPW*NISVTW
Trigger: CCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTT...CCCTCGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp CACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTCTGCGTTCAATCAGCCCACTaGCACCTCTGCCTAATGCAG +
Preference number: 5 (lower is better)
Translates to: HPRGSVGRGSQDVRGLLCVQSAH*HLCLMQ
Trigger: CTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAAC...GCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS TCA 90 bp GGCCGCAGAATGGCAGGCGGACCGTGGCGAAGGCTCTGCCCTGGTTaGACATTTCTGTCACTTGGGAAGGCAGGTAGCTGGTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GRRMAGGPWRRLCPG*TFLSLGKAGSWWRP
Trigger: TGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000471851.1
ENST00000484262.1
CDS TCA 90 bp CCGCAGCAGATCCAGAAGCAGAATGAGCCAGACCTACTCTGCTACTaGGAAGAGAGCAGTGGGGCTGGGCGCGGGGCACCCGCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: PQQIQKQNEPDLLCY*EESSGAGRGAPACS
Trigger: ACTACAGGCGGGTGCCCCGCGCCCAGCCCCACTGCTCTCTTCTCAGTAGCAGAGTAGGTCTGGCTCATTCTGCTTCTGGATCTGCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 90 bp GTGGCACACTGCAAGCTCCGCTCACTCTCGGGCAGTACACGCCTGTaGCCTGACAAGTGGGTGGCTGTCTTTGCTTCTCCCGGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: VAHCKLRSLSGSTRL*PDKWVAVFASPGAG
Trigger: ACCAGCTCCGGGAGAAGCAAAGACAGCCACCCACTTGTCAGGCCACAGGCGTGTACTGCCCGAGAGTGAGCGGAGCTTGCAGTGTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS-3UTR CAA 90 bp CAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCCTGAAGCAGTTCTTTTaGACTCCAGGTTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: QGHPRGSVGRGSQDVRGLLKQFF*TPGSIQ
Trigger: CTGGATGGAACCTGGAGTCAAAAAGAACTGCTTCAG...GAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS GCA 90 bp CATGGCTATGGCCACAGGCAGAATCTGCGCTCAAAAACAAACACCTaGCTGGGCGACACGCAGGGCACAGCGCTGAGGGTGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: HGYGHRQNLRSKTNT*LGDTQGTALRVPAE
Trigger: TTCCGCAGGCACCCTCAGCGCTGTGCCCTGCGTGTCGCCCAGGCAGGTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGCCATAGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS CCA 90 bp CATGAGCACTTTCCCGAAGTACCCGGTCCAGGTGGTGGGCTCCTCTaGGGGTCTGGAAGGAAAGGCCACCAGACACATGAAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: HEHFPEVPGPGGGLL*GSGRKGHQTHEAAP
Trigger: GGGTGCAGCTTCATGTGTCTGGTGGCCTTTCCTTCCAGACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS-3UTR CAA 90 bp ATAGAAAGGCACATGACGCCCTGTGAAGGACGTGGCCCAGCCGCCTACTCTCTGGCCGCCTACTCTCTGTaGCTGTCTCCCGCTACGACC +
Preference number: 5 (lower is better)
Translates to: IERHMTPCEGRGPAAYSLAAYSL*LSPATT
Trigger: GGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGC...CAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGCCTTTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp TCTGGCCTCGGCGGTCCCCACTGTCTCAGCCTGCGTGACCGGGATCCCATTTCATGCCTAATGCAGATGTaGTGTGTGCCGCACACCAGC +
Preference number: 5 (lower is better)
Translates to: SGLGGPHCLSLRDRDPISCLMQM*CVPHTS
Trigger: GCTGGTGTGCGGCACACACAACATCTGCATTAGGCA...TGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS TCA 90 bp CGGTCTCAGTGTTGCTGGAGGCGGAGAGGAACATGCCGTCCATGCTaGAGGCCAGGGAGCAGATGCTCACGCACCTCTTTACTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RSQCCWRRRGTCRPC*RPGSRCSRTSLLLS
Trigger: GGAGAGGAGTAAAGAGGTGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
ENST00000488359.1
CDS-3UTR CAA 90 bp CTCAGCGGCCTCCCTCTGTCCCCGTCACTCCTGAGCATGTCTGAGGCCGCCAGTTTCATGTCCCGAATGTaGTGGATGTACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: LSGLPLSPSLLSMSEAASFMSRM*WMYRDS
Trigger: GGAGTCCCTGTACATCCACAACATTCGGGACATGAA...ACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCCAAAGCGAGGAGGTTTaGCGGGCTTCACCAAACAGT +
Preference number: 5 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPQSEEV*RASPNS
Trigger: ACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTG...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp GCCTTGACAAGCAGACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCTCCCCTATGCTGGCTaGGCACGTTCATGCATGCAA +
Preference number: 5 (lower is better)
Translates to: ALTSRPTVRDATVSLRTRLPYAG*ARSCMQ
Trigger: TTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG...CCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTGAGAGCCCTCTGGCCTaGCACCACAAGACGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGESPLA*HHKTQA
Trigger: CGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTC...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS GCA 90 bp TTTCTACTACAAATGTGGACCAGCTCTCCCGTCCCAGTGGCACACTaGAAGCTCCGCTCACTCTCGGGCAGTACACGCCTGTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: FLLQMWTSSPVPVAH*KLRSLSGSTRLWPD
Trigger: GTCAGGCCACAGGCGTGTACTGCCCGAGAGTGAGCGGAGCTTGCAGTGTGCCACTGGGACGGGAGAGCTGGTCCACATTTGTAGTAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 90 bp TCCGCTCACTCTCGGGCAGTACACGCCTGTGGCCTGACAAGTGGGTaGCTGTCTTTGCTTCTCCCGGAGCTGGTAAGTATAGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: SAHSRAVHACGLTSG*LSLLLPELVSIGPC
Trigger: GCAAGGTCCTATACTTACCAGCTCCGGGAGAAGCAAAGACAGCCACCCACTTGTCAGGCCACAGGCGTGTACTGCCCGAGAGTGAGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 90 bp AAGCTCCGCTCACTCTCGGGCAGTACACGCCTGTGGCCTGACAAGTaGGTGGCTGTCTTTGCTTCTCCCGGAGCTGGTAAGTATAGGACC +
Preference number: 5 (lower is better)
Translates to: KLRSLSGSTRLWPDK*VAVFASPGAGKYRT
Trigger: GGTCCTATACTTACCAGCTCCGGGAGAAGCAAAGACAGCCACCCACTTGTCAGGCCACAGGCGTGTACTGCCCGAGAGTGAGCGGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 90 bp TCAGGCTTCAGGGAGGAGCTACAGCCTTTGGCCACGGACAAGACGTaGCAGCTGACCACACATCCCCTTTGCAAGGGTGTGAGGACGTCT +
Preference number: 5 (lower is better)
Translates to: SGFREELQPLATDKT*QLTTHPLCKGVRTS
Trigger: AGACGTCCTCACACCCTTGCAAAGGGGATGTGTGGTCAGCTGCCACGTCTTGTCCGTGGCCAAAGGCTGTAGCTCCTCCCTGAAGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS-3UTR CAA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCTTCATGTCCCGAATGTaGTGGATGTACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPFMSRM*WMYRDS
Trigger: GGAGTCCCTGTACATCCACAACATTCGGGACATGAA...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGTGCACGGTCTCAGTGTaGCTGGAGGCGGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQCTVSV*LEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCA...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp GATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCCCCAAGGCTCTGCCCTGGTaGAACATTTCTGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: DRTSVPAEVCPAHLVGSPKALPW*NISVTW
Trigger: CCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTT...GGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGGAGTCCAAGATCTCATaGGTCGTTTCCAGACTGCCG +
Preference number: 5 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWESKIS*VVSRLP
Trigger: CGGCAGTCTGGAAACGACCAATGAGATCTTGGACTC...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp GGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGTGGGCAGCTGTAGGCAAGTCTCGTaGGGGATGAAGGCACGTAAG +
Preference number: 5 (lower is better)
Translates to: GDRTSVPAEVCPAHLVGSCRQVS*GMKARK
Trigger: CTTACGTGCCTTCATCCCCAACGAGACTTGCCTACA...GCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CAA 90 bp CAGGGCCACCCAAGGGGGAGTGTGGGCCGAGGGTCACAGGACGTCCGAGGCCTCACAGACAAGCAGGTTTaGAAGGAAAAGTTCAATCAG +
Preference number: 5 (lower is better)
Translates to: QGHPRGSVGRGSQDVRGLTDKQV*KEKFNQ
Trigger: CTGATTGAACTTTTCCTTCAAAACCTGCTTGTCTGT...GAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGTGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS CCA 90 bp CAGAGTCCAAGATCTCATTGGTCGTTTCCAGACTGCCGTCCAGCCTaGAGGGAAGAAAGCGACACAGCTCAGCGTCTCCACACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: QSPRSHWSFPDCRPA*REESDTAQRLHTGQ
Trigger: CTGCCCTGTGTGGAGACGCTGAGCTGTGTCGCTTTCTTCCCTCCAGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS-3UTR CAA 90 bp CTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTATCCCGTCCCCGCTCTaGTTTATGCTCCAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LLAPLCWLGTFMHAKRGGIPSPL*FMLQSR
Trigger: CCGGCTCTGGAGCATAAACAAGAGCGGGGACGGGAT...ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CAA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGTCCTGGGGGTCCAGGTaGTACATGTACAGGTACCCG +
Preference number: 5 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQSWGSR*YMYRYP
Trigger: CGGGTACCTGTACATGTACAACCTGGACCCCCAGGA...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCCTGGGGGTCCAGGTaGTACATGTACAGGTACCCG +
Preference number: 5 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRSWGSR*YMYRYP
Trigger: CGGGTACCTGTACATGTACAACCTGGACCCCCAGGA...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS GCA 90 bp AGTCGTGAGAGGCAGAGTCCAAGATCTCATTGGTCGTTTCCAGACTaGCGTCCAGCCTGGAGGGAAGAAAGCGACACAGCTCAGCGTCTC +
Preference number: 5 (lower is better)
Translates to: SRERQSPRSHWSFPD*RPAWREESDTAQRL
Trigger: GAGACGCTGAGCTGTGTCGCTTTCTTCCCTCCAGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS-3UTR CAA 90 bp ATAGAAAGGCACATGACGCCCTGTGAAGGACGTGGCCCAGCCGCCTACTCTCTGATCAGCCTCTGCCTGTaGAGCTTCACAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: IERHMTPCEGRGPAAYSLISLCL*SFTARI
Trigger: GATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGAT...CAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGCCTTTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGAGCGAGCAGATGTTTTaGTGGCCGCAGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRSEQMF*WPQNGR
Trigger: CCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp GGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGGCGGGATCTTCTGAATaGTGGCTAGCGAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: GKWSRWGPREIGLLSQLKAGSSE*WLASRC
Trigger: ACATCTGCTCGCTAGCCACAATTCAGAAGATCCCGC...CTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CAA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCATCCTGGGGGTCCAGGTaGTACATGTACAGGTACCCG +
Preference number: 5 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHASWGSR*YMYRYP
Trigger: CGGGTACCTGTACATGTACAACCTGGACCCCCAGGA...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp GGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGGAGTCCAAGATCTCATaGGTCGTTTCCAGACTGCCG +
Preference number: 5 (lower is better)
Translates to: GKWSRWGPREIGLLSQLKESKIS*VVSRLP
Trigger: CGGCAGTCTGGAAACGACCAATGAGATCTTGGACTC...CTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CAA 90 bp CTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCACACCAGCGGCTGGGACAAAGCGAGGAGGTTTaGCGGGCTTCACCAAACAGT +
Preference number: 5 (lower is better)
Translates to: LAPLPNADVVCAAHQRLGQSEEV*RASPNS
Trigger: ACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTG...TCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGACAGCTAGGGACGTGTaGTCCTGGTTGAAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRTARDV*SWLKLA
Trigger: CGCCAACTTCAACCAGGACAACACGTCCCTAGCTGT...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382384.6
ENST00000401525.7
CDS TCA 90 bp GGTCGTCTGTGTAGGCTTTTCCTGCAGCTGCGCCGTATGTCTGAGTaGCTAAGGGGCAGTCGTGAGAGGCAGAGTCCAAGATCTCATTGG +
Preference number: 5 (lower is better)
Translates to: GRLCRLFLQLRRMSE*LRGSRERQSPRSHW
Trigger: CCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAAAAGCCTACACAGACGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382384.6
ENST00000404704.7
ENST00000484262.1
CDS GCA 90 bp GGCTCCTCTGGGGGTTTTTCTTTCACAGTCTCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTGGAGGCGGAGAGGAACATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GSSGGFSFTVSSLKM*TVSVLLEAERNMPS
Trigger: GGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
CDS GCA 90 bp TACATGCGTGAACATCTCCACATGGCTATGGCCACAGGCAGAATCTaGGCTCAAAAACAAACACCTGCCTGGGCGACACGCAGGGCACAG +
Preference number: 5 (lower is better)
Translates to: YMREHLHMAMATGRI*AQKQTPAWATRRAQ
Trigger: CTGTGCCCTGCGTGTCGCCCAGGCAGGTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCACGCATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS CCA 90 bp GGCGTCTCCCTGATCGTATGCAGCACCTTCATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCCAGGCATACTATCAGCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GVSLIVCSTFMSRML*MYRDSSRHTISLCL
Trigger: CAGGCAGAGGCTGATAGTATGCCTGGAGGAGTCCCTGTACATCCACAACATTCGGGACATGAAGGTGCTGCATACGATCAGGGAGACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000465102.5
ENST00000466014.5
ENST00000475309.5
ENST00000484262.1
ENST00000496867.5
CDS-3UTR CAA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAATCAGCCTCTGCCTGTaGAGCTTCACAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSISLCL*SFTARI
Trigger: GATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGAT...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGATCAGCCTCTGCCTGTaGAGCTTCACAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRISLCL*SFTARI
Trigger: GATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGAT...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGCACGGTCTCAGTGTaGCTGGAGGCGGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLCTVSV*LEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCA...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGCGGGATCTTCTGAATaGTGGCTAGCGAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRAGSSE*WLASRC
Trigger: ACATCTGCTCGCTAGCCACAATTCAGAAGATCCCGC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCGAGTCCAAGATCTCATaGGTCGTTTCCAGACTGCCG +
Preference number: 5 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVESKIS*VVSRLP
Trigger: CGGCAGTCTGGAAACGACCAATGAGATCTTGGACTC...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAGAGTCCAAGATCTCATaGGTCGTTTCCAGACTGCCG +
Preference number: 5 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSESKIS*VVSRLP
Trigger: CGGCAGTCTGGAAACGACCAATGAGATCTTGGACTC...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGGAGTCCAAGATCTCATaGGTCGTTTCCAGACTGCCG +
Preference number: 5 (lower is better)
Translates to: AMHKVLCEASVLCSPGQRESKIS*VVSRLP
Trigger: CGGCAGTCTGGAAACGACCAATGAGATCTTGGACTC...CCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp GCTGGAAAGTGGCTTCTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCATGGCTGCTGGGTGCCTaGGTTTGGAATGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: AGKWLLAPLCWLGTFMHAWLLGA*VWNAES
Trigger: AGACTCTGCATTCCAAACCAAGGCACCCAGCAGCCA...TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS TCA 90 bp AGGTGGTGGGCTCCTCTGGGGGTTTTTCTTTCACAGTCTCGAGTTTaGAGATGTGCACGGTCTCAGTGTTGCTGGAGGCGGAGAGGAACA +
Preference number: 5 (lower is better)
Translates to: RWWAPLGVFLSQSRV*RCARSQCCWRRRGT
Trigger: TGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
CDS TCA 90 bp TATGTTCCTTCAAACATTCCCGTGGCGAGGAGCTCAGCACTGCTCTaGACGCCGCAGCAGATCCAGAAGCAGAATGAGCCAGACCTACTC +
Preference number: 5 (lower is better)
Translates to: YVPSNIPVARSSALL*TPQQIQKQNEPDLL
Trigger: GAGTAGGTCTGGCTCATTCTGCTTCTGGATCTGCTGCGGCGTTCAGAGCAGTGCTGAGCTCCTCGCCACGGGAATGTTTGAAGGAACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 90 bp TTCTGTATTTTCTACTACAAATGTGGACCAGCTCTCCCGTCCCAGTaGCACACTGCAAGCTCCGCTCACTCTCGGGCAGTACACGCCTGT +
Preference number: 5 (lower is better)
Translates to: FCIFYYKCGPALPSQ*HTASSAHSRAVHAC
Trigger: ACAGGCGTGTACTGCCCGAGAGTGAGCGGAGCTTGCAGTGTGCCACTGGGACGGGAGAGCTGGTCCACATTTGTAGTAGAAAATACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS-3UTR CAA 90 bp GACCCACTGTGCGCGACGCCACGGTTTCCTTACGCACTCGGCATTATGTACAGATTCATGTCCCGAATGTaGTGGATGTACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: DPLCATPRFPYALGIMYRFMSRM*WMYRDS
Trigger: GGAGTCCCTGTACATCCACAACATTCGGGACATGAA...TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp ACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTTCATGTCCCGAATGTaGTGGATGTACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: TKSSVKPVFSAPRVRGHRFMSRM*WMYRDS
Trigger: GGAGTCCCTGTACATCCACAACATTCGGGACATGAA...CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp GGAAAATGGTCCAGGTGGGGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTTCACAGTCTCGAGTTaGAAGATGTGCACGGTCTCA +
Preference number: 5 (lower is better)
Translates to: GKWSRWGPREIGLLSQLKFTVSS*KMCTVS
Trigger: TGAGACCGTGCACATCTTCAAACTCGAGACTGTGAA...CTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CAA 90 bp GTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCAAGTTCACAGTCTCGAGTTaGAAGATGTGCACGGTCTCA +
Preference number: 5 (lower is better)
Translates to: VLCEASVLCSPGQRSQVKFTVSS*KMCTVS
Trigger: TGAGACCGTGCACATCTTCAAACTCGAGACTGTGAA...CTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCTCCTGGGGGTCCAGGTaGTACATGTACAGGTACCCG +
Preference number: 5 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEASWGSR*YMYRYP
Trigger: CGGGTACCTGTACATGTACAACCTGGACCCCCAGGA...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTTCCTGGGGGTCCAGGTaGTACATGTACAGGTACCCG +
Preference number: 5 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCSWGSR*YMYRYP
Trigger: CGGGTACCTGTACATGTACAACCTGGACCCCCAGGA...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAATGCCCTCGACACTTaGGCTGCTGGGTGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEANALDT*AAGCLG
Trigger: ACCAAGGCACCCAGCAGCCAAAGTGTCGAGGGCATT...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp CAACAGCCCTGTGAGGTAGGGATGAGTCCCATGGAACGGTCCAGAAAACGCAGGGAGATTACAGAAGGTTaGGTCCCAGAGTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: QQPCEVGMSPMERSRKRREITEG*VPESTE
Trigger: CTCAGTGGACTCTGGGACCAAACCTTCTGTAATCTC...CCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS TCA 90 bp AAGGCACGTAAGTACCTTTTCCTGCAGCTGCGCCGTATGTCTGAGTaGCTAAGGGGCAGTCGTGAGAGGCAGAGTCCAAGATCTCATTGG +
Preference number: 5 (lower is better)
Translates to: KARKYLFLQLRRMSE*LRGSRERQSPRSHW
Trigger: CCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000401525.7
ENST00000466014.5
ENST00000471851.1
ENST00000479690.1
CDS GCA 90 bp TTTTCTATGTTCCTTCAAACATTCCCGTGGCGAGGAGCTCAGCACTaGTCTGAACGCCGCAGCAGATCCAGAAGCAGAATGAGCCAGACC +
Preference number: 5 (lower is better)
Translates to: FSMFLQTFPWRGAQH*SERRSRSRSRMSQT
Trigger: GGTCTGGCTCATTCTGCTTCTGGATCTGCTGCGGCGTTCAGAGCAGTGCTGAGCTCCTCGCCACGGGAATGTTTGAAGGAACATAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS GCA 90 bp CTTCTTTCTGACAACAGCAAGCGACCTTCATTCAAAAGGAACAGATaGAAGCGTCTGCCACAAATGGGGAGATGGTGGCAGGGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: LLSDNSKRPSFKRNR*KRLPQMGRWWQGRG
Trigger: CCCCCGACCCTGCCACCATCTCCCCATTTGTGGCAGACGCTTGCATCTGTTCCTTTTGAATGAAGGTCGCTTGCTGTTGTCAGAAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485854.5
CDS CCA 90 bp GGCGTCTCCCTGATCGTATGCAGCACCTTCATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCCAGGCATACTATCAGCCTCATGTTG +
Preference number: 5 (lower is better)
Translates to: GVSLIVCSTFMSRML*MYRDSSRHTISLML
Trigger: CAACATGAGGCTGATAGTATGCCTGGAGGAGTCCCTGTACATCCACAACATTCGGGACATGAAGGTGCTGCATACGATCAGGGAGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480238.5
CDS-3UTR CAA 90 bp AAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCTTCACAGTCTCGAGTTaGAAGATGTGCACGGTCTCA +
Preference number: 5 (lower is better)
Translates to: KVLCEASVLCSPGQRSQVFTVSS*KMCTVS
Trigger: TGAGACCGTGCACATCTTCAAACTCGAGACTGTGAA...GACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCATTCACAGTCTCGAGTTaGAAGATGTGCACGGTCTCA +
Preference number: 5 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSFTVSS*KMCTVS
Trigger: TGAGACCGTGCACATCTTCAAACTCGAGACTGTGAA...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CACAAAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGTTCACAGTCTCGAGTTaGAAGATGTGCACGGTCTCA +
Preference number: 5 (lower is better)
Translates to: HKVLCEASVLCSPGQRSQFTVSS*KMCTVS
Trigger: TGAGACCGTGCACATCTTCAAACTCGAGACTGTGAA...CTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCAGCGAGCAGATGTTTTaGTGGCCGCAGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLSEQMF*WPQNGR
Trigger: CCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGCGAGCAGATGTTTTaGTGGCCGCAGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEASEQMF*WPQNGR
Trigger: CCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTAGCGAGCAGATGTTTTaGTGGCCGCAGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSSEQMF*WPQNGR
Trigger: CCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CTAGCTCCCCTATGCTGGCTTGGCACGTTCATGCATGCAAAGCGAGGAGGTTTTTGTAGGCAAGTCTCGTaGGGGATGAAGGCACGTAAG +
Preference number: 5 (lower is better)
Translates to: LAPLCWLGTFMHAKRGGFCRQVS*GMKARK
Trigger: CTTACGTGCCTTCATCCCCAACGAGACTTGCCTACA...AAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CAA 90 bp CCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCCTCCCCTATGCTGGCTaGGCACGTTCATGCATGCAA +
Preference number: 5 (lower is better)
Translates to: PRLRSKFIAAMHKVLCEALPYAG*ARSCMQ
Trigger: TTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG...GGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp GGCCCTAGGGAGATCGGACTTCTGTCCCAGCTGAAGTCTGCCCAGCACACCTGGACCTTTCAAGTTCATTaGCTGCCTGAAAGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: GPREIGLLSQLKSAQHTWTFQVH*LPERKV
Trigger: AACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGT...CCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp AAGTCCTCTGTGAAGCCAGTGTTCTCTGCTCCCCGGGTCAGAGGTCACAGGTCACAACGTTTACAGGTTTaGTTTCCTATCCCCCACGCT +
Preference number: 5 (lower is better)
Translates to: KSSVKPVFSAPRVRGHRSQRLQV*FPIPHA
Trigger: AGCGTGGGGGATAGGAAACAAAACCTGTAAACGTTG...TGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGACAGCTAGGGACGTGTaGTCCTGGTTGAAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLTARDV*SWLKLA
Trigger: CGCCAACTTCAACCAGGACAACACGTCCCTAGCTGT...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382384.6
ENST00000401525.7
CDS GCA 90 bp TTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCACAGGTCAAGTTCAGTCAGTCCGAA +
Preference number: 5 (lower is better)
Translates to: FIAAMHKVLCEASVL*SPGQRSQVKFSQSE
Trigger: TTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000471851.1
ENST00000479690.1
ENST00000484262.1
CDS GCA 90 bp GCGGTTGTATTGCTGAGCCAAGTCAGGATGCCAGGGACACCACAGTaGTCCTCTTCAGGAAAAAGCCACACTTTAGAGAGCTATTCGAGC +
Preference number: 5 (lower is better)
Translates to: AVVLLSQVRMPGTPQ*SSSGKSHTLESYSS
Trigger: GCTCGAATAGCTCTCTAAAGTGTGGCTTTTTCCTGAAGAGGAGCACTGTGGTGTCCCTGGCATCCTGACTTGGCTCAGCAATACAACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS-3UTR CAA 90 bp ATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCATGCACGGTCTCAGTGTaGCTGGAGGCGGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: MHAKRGGFAGFTKQLILACTVSV*LEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCA...TGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAAGCGAGCAGATGTTTTaGTGGCCGCAGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCESEQMF*WPQNGR
Trigger: CCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCGCGGGATCTTCTGAATaGTGGCTAGCGAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: HPLPRLRSKFIAAMHKVLAGSSE*WLASRC
Trigger: ACATCTGCTCGCTAGCCACAATTCAGAAGATCCCGC...GAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp TCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGGCGGGATCTTCTGAATaGTGGCTAGCGAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: SSPPTQVKVHSSNAQSPLAGSSE*WLASRC
Trigger: ACATCTGCTCGCTAGCCACAATTCAGAAGATCCCGC...CAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTTTCATGTCCCGAATGTaGTGGATGTACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: PLPRLRSKFIAAMHKVLCFMSRM*WMYRDS
Trigger: GGAGTCCCTGTACATCCACAACATTCGGGACATGAA...ACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTAAGGCTCTGCCCTGGTaGAACATTTCTGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: PSSPPTQVKVHSSNAQSPKALPW*NISVTW
Trigger: CCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTT...AGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CTGCCATCCTCTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTAAGGCTCTGCCCTGGTaGAACATTTCTGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: LPSSPPTQVKVHSSNAQSKALPW*NISVTW
Trigger: CCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTT...ACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS-3UTR CAA 90 bp CTCCCCCGACTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAACAAAGCGAGGAGGTTTaGCGGGCTTCACCAAACAGT +
Preference number: 5 (lower is better)
Translates to: LPRLRSKFIAAMHKVLCEQSEEV*RASPNS
Trigger: ACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTG...TTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp AAAGTTCAATCAGCCCACTTGCACCTCTGCCTAATGCAGATGTTGTGTGTGCCGCAAAATCGCTTTCCTTaGCTCCAGCGAGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KVQSAHLHLCLMQMLCVPQNRFP*LQRVQA
Trigger: TGCCTGGACTCGCTGGAGCAAAGGAAAGCGATTTTG...CGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS TCA 90 bp ACACATCTTCCGTATCGGCTGAAATCACAAAGGGAAGTACATGCGTaGACATCTCCACATGGCTATGGCCACAGGCAGAATCTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: THLPYRLKSQREVHA*TSPHGYGHRQNLRS
Trigger: TGAGCGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCACGCATGTACTTCCCTTTGTGATTTCAGCCGATACGGAAGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS GCA 90 bp ATGCACACATCTTCCGTATCGGCTGAAATCACAAAGGGAAGTACATaGGTGAACATCTCCACATGGCTATGGCCACAGGCAGAATCTGCG +
Preference number: 5 (lower is better)
Translates to: MHTSSVSAEITKGST*VNISTWLWPQAESA
Trigger: CGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCACGCATGTACTTCCCTTTGTGATTTCAGCCGATACGGAAGATGTGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS CCA 90 bp GAAATCACAAAGGGAAGTACATGCGTGAACATCTCCACATGGCTATaGCCACAGGCAGAATCTGCGCTCAAAAACAAACACCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: EITKGSTCVNISTWL*PQAESALKNKHLPG
Trigger: CCCAGGCAGGTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCACGCATGTACTTCCCTTTGTGATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS-3UTR CAA 90 bp ATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCACTCCCCTATGCTGGCTaGGCACGTTCATGCATGCAA +
Preference number: 5 (lower is better)
Translates to: MHAKRGGFAGFTKQLILALPYAG*ARSCMQ
Trigger: TTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAG...TGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS CCA 90 bp TCGGCTGAAATCACAAAGGGAAGTACATGCGTGAACATCTCCACATaGCTATGGCCACAGGCAGAATCTGCGCTCAAAAACAAACACCTG +
Preference number: 5 (lower is better)
Translates to: SAEITKGSTCVNIST*LWPQAESALKNKHL
Trigger: CAGGTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCACGCATGTACTTCCCTTTGTGATTTCAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS-3UTR CAA 90 bp ATGCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAGCGGGATCTTCTGAATaGTGGCTAGCGAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: MHAKRGGFAGFTKQLILAAGSSE*WLASRC
Trigger: ACATCTGCTCGCTAGCCACAATTCAGAAGATCCCGC...TGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS TCA 90 bp TTAGTTCCACTTGCGTCAAAGGCCAGTGCCGCTAAAGGACTGTCGTaGGCCGGAATCATGTTTGCAGCTCTCAAATTAATGGTATCGAAG +
Preference number: 5 (lower is better)
Translates to: LVPLASKASAAKGLS*AGIMFAALKLMVSK
Trigger: CTTCGATACCATTAATTTGAGAGCTGCAAACATGATTCCGGCTCACGACAGTCCTTTAGCGGCACTGGCCTTTGACGCAAGTGGAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000465102.5
ENST00000466014.5
ENST00000480238.5
ENST00000484262.1
ENST00000488359.1
ENST00000496867.5
CDS TCA 90 bp AAGCAAAATCATATCCAAATCAAAGTAAAGGTCATCGGTGGCCAATaGAGAGCGGAGAAAACGGAGGCGGGAGAACAGACGCGACCTCAA +
Preference number: 5 (lower is better)
Translates to: KQNHIQIKVKVIGGQ*RAEKTEAGEQTRPQ
Trigger: TTGAGGTCGCGTCTGTTCTCCCGCCTCCGTTTTCTCCGCTCTTCATTGGCCACCGATGACCTTTACTTTGATTTGGATATGATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS-3UTR CAA 90 bp CTCAGGTCAAAGTTCATAGCAGCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTAAGGCTCTGCCCTGGTaGAACATTTCTGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: LRSKFIAAMHKVLCEASVKALPW*NISVTW
Trigger: CCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTT...AACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000484262.1
CDS TCA 90 bp GCTGGAGAACAATCTCTCTACAATGCACACATCTTCCGTATCGGCTaGAATCACAAAGGGAAGTACATGCGTGAACATCTCCACATGGCT +
Preference number: 5 (lower is better)
Translates to: AGEQSLYNAHIFRIG*NHKGKYMREHLHMA
Trigger: AGCCATGTGGAGATGTTCACGCATGTACTTCCCTTTGTGATTTCAGCCGATACGGAAGATGTGTGCATTGTAGAGAGATTGTTCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS-3UTR CAA 90 bp GTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACAATCTTATCCCGTCCCCGCTCTaGTTTATGCTCCAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: VKMMYFLSVMELDYHYNLIPSPL*FMLQSR
Trigger: CCGGCTCTGGAGCATAAACAAGAGCGGGGACGGGAT...AAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288828.9
ENST00000401525.7
CDS-3UTR CAA 90 bp GTGAAAATGATGTATTTCCTCAGCGTTATGGAGTTAGACTACCACTACAATCTTTGCACGGTCTCAGTGTaGCTGGAGGCGGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: VKMMYFLSVMELDYHYNLCTVSV*LEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCA...AAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
CDS-3UTR CAA 90 bp GCATGCAAAGCGAGGAGGTTTTGCGGGCTTCACCAAACAGTTAATTTTGGCAAACAATCTCTCATCGGTTaGCTGAGGAAATTTTCTAAG +
Preference number: 5 (lower is better)
Translates to: ACKARRFCGLHQTVNFGKQSLIG*LRKFSK
Trigger: CTTAGAAAATTTCCTCAGCAAACCGATGAGAGATTG...TTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS-3UTR CAA 90 bp GTAAATAGTTTTTGCCTTTTCCCTTCTATCCGTAACTTCCACCACTCCATAGATAATGCAGCTCACTCTTaGGTGACAGGAAACCCTAGC +
Preference number: 5 (lower is better)
Translates to: VNSFCLFPSIRNFHHSIDNAAHS*VTGNPS
Trigger: GCTAGGGTTTCCTGTCACCAAAGAGTGAGCTGCATT...ATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288828.9
CDS TCA 90 bp ACACGAAAGACAAAGGTTCCTTTCAGTCAGTTCTGTTGCTGGATTTaGATGGTGAGTTTAGGAACCAAACTCCTAGGTAAAGTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: TRKTKVPFSQFCCWI*MVSLGTKLLGKVKE
Trigger: CTCTTTCACTTTACCTAGGAGTTTGGTTCCTAAACTCACCATTCAAATCCAGCAACAGAACTGACTGAAAGGAACCTTTGTCTTTCGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 90 bp GATAACATAAAACTGAAATCCAAATACAACCTCCAGAATCCATTCTaGACATTCACGTACTTTACCTCTTTACTCCTCTCCGAAACTCAA +
Preference number: 5 (lower is better)
Translates to: DNIKLKSKYNLQNPF*TFTYFTSLLLSETQ
Trigger: TTGAGTTTCGGAGAGGAGTAAAGAGGTAAAGTACGTGAATGTCCAGAATGGATTCTGGAGGTTGTATTTGGATTTCAGTTTTATGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465102.5
CDS CCA 72 bp GCGGGTGCTCGCTGTCCTCATCCAGGCGCAGGGCGCTaGCCTCGTCCTCCAGGCAGGCGCCACCCACAGCAC +
Preference number: 6 (lower is better)
Translates to: AGARCPHPGAGR*PRPPGRRHPQH
Trigger: GTGCTGTGGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000471851.1
ENST00000479690.1
ENST00000484262.1
CDS GCA 72 bp CTGCTGGGGCCCATCCTCCTCACTGCCGAGCCTGGATaGGGAGGTGCTCGCTCCATGGCCAGCTCCGGGGTC +
Preference number: 6 (lower is better)
Translates to: LLGPILLTAEPG*GGARSMASSGV
Trigger: GACCCCGGAGCTGGCCATGGAGCGAGCACCTCCGCATCCAGGCTCGGCAGTGAGGAGGATGGGCCCCAGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 72 bp TCAACCGCCGCCTCATCCCGTCCCCGCTCTTGTTTATaGTCCAGAGCCGGGGCACCCGGTACGCCTGCGCGG +
Preference number: 6 (lower is better)
Translates to: STAASSRPRSCL*SRAGAPGTPAR
Trigger: CCGCGCAGGCGTACCGGGTGCCCCGGCTCTGGAGCATAAACAAGAGCGGGGACGGGATGAGGCGGCGGTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401525.7
CDS CAA 72 bp CCTGGGATCAACCGCCGCCTCATCCCGTCCCCGCTCTaGTTTATGCTCCAGAGCCGGGGCACCCGGTACGCC +
Preference number: 6 (lower is better)
Translates to: PGINRRLIPSPL*FMLQSRGTRYA
Trigger: GGCGTACCGGGTGCCCCGGCTCTGGAGCATAAACAAGAGCGGGGACGGGATGAGGCGGCGGTTGATCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401525.7
CDS TCA 72 bp CAAACACCTGCCTGGGCGACACGCAGGGCACAGCGCTaGGGGTGCCTGCGGAACATGTGGTCATGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: QTPAWATRRAQR*GCLRNMWSWGG
Trigger: CCCACCCCATGACCACATGTTCCGCAGGCACCCTCAGCGCTGTGCCCTGCGTGTCGCCCAGGCAGGTGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS GCA 72 bp CAGGGCAGCCCTGCGGGCAGTACACACTGGCTGCCCTaGGGCAACAGAGCCAGCACACCACTCACCACACAG +
Preference number: 6 (lower is better)
Translates to: QGSPAGSTHWLP*GNRASTPLTTQ
Trigger: CTGTGTGGTGAGTGGTGTGCTGGCTCTGTTGCCGCAGGGCAGCCAGTGTGTACTGCCCGCAGGGCTGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS GCA 72 bp AGCGACACAGCTCAGCGTCTCCACACAGGGCAGCCCTaGGGGCAGTACACACTGGCTGCCCTGCGGCAACAG +
Preference number: 6 (lower is better)
Translates to: SDTAQRLHTGQP*GQYTLAALRQQ
Trigger: CTGTTGCCGCAGGGCAGCCAGTGTGTACTGCCCGCAGGGCTGCCCTGTGTGGAGACGCTGAGCTGTGTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS CCA 72 bp GTCTCCACACAGGGCAGCCCTGCGGGCAGTACACACTaGCTGCCCTGCGGCAACAGAGCCAGCACACCACTC +
Preference number: 6 (lower is better)
Translates to: VSTQGSPAGSTH*LPCGNRASTPL
Trigger: GAGTGGTGTGCTGGCTCTGTTGCCGCAGGGCAGCCAGTGTGTACTGCCCGCAGGGCTGCCCTGTGTGGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS CCA 72 bp GCGCTGAGGGTGCCTGCGGAACATGTGGTCATGGGGTaGGGACAGCCCGGGGGTCTGAGGGTCTTGATTCGC +
Preference number: 6 (lower is better)
Translates to: ALRVPAEHVVMG*GQPGGLRVLIR
Trigger: GCGAATCAAGACCCTCAGACCCCCGGGCTGTCCCCACCCCATGACCACATGTTCCGCAGGCACCCTCAGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS GCA 72 bp CTCCATGCCCTACGCGAGGGCTCTGTCTACCCTGCGTaGTGCCTGTGGGAGAAGCTCATCTGCTGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: LHALREGSVYPA*CLWEKLICWGP
Trigger: TGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGCACGCAGGGTAGACAGAGCCCTCGCGTAGGGCATGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 72 bp TCACGGAGCTTCCTCTGGGAGGTGTCGGGGGAGGGGTaGTCAGGCTTCAGGGAGGAGCTACAGCCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: SRSFLWEVSGEG*SGFREELQPLA
Trigger: GGCCAAAGGCTGTAGCTCCTCCCTGAAGCCTGAGCACCCCTCCCCCGACACCTCCCAGAGGAAGCTCCGTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp AGGTGCTCGCTCCATGGCCAGCTCCGGGGTCTTCACTaGCTAACGATGTCAGAGGGTGGGCGGGTCCGTGCT +
Preference number: 6 (lower is better)
Translates to: RCSLHGQLRGLH*LTMSEGGRVRA
Trigger: AGCACGGACCCGCCCACCCTCTGACATCGTTAGCCAGTGAAGACCCCGGAGCTGGCCATGGAGCGAGCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp GGAAAGGCCACCAGACACATGAAGCTGCACCCTCCCTaGGGGGACGGCCACCCCCTACTCACACAGACGCAC +
Preference number: 6 (lower is better)
Translates to: GKATRHMKLHPP*GDGHPLLTQTH
Trigger: GTGCGTCTGTGTGAGTAGGGGGTGGCCGTCCCCCCAGGGAGGGTGCAGCTTCATGTGTCTGGTGGCCTTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CAA 90 bp TGCTGCTTCATCAGGGCACACTCGCCGCCCTCCTGGGGGTCCAGGTaGTACATGTACAGGTACCCGTCGGCGGCACCCACCAACAACCGC +
Preference number: 6 (lower is better)
Translates to: CCFIRAHSPPSWGSR*YMYRYPSAAPTNNR
Trigger: GCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000471851.1
ENST00000484262.1
CDS TCA 72 bp GCTCCGCTCACTCTCGGGCAGTACACGCCTGTGGCCTaGCAAGTGGGTGGCTGTCTTTGCTTCTCCCGGAGC +
Preference number: 6 (lower is better)
Translates to: APLTLGQYTPVA*QVGGCLCFSRS
Trigger: GCTCCGGGAGAAGCAAAGACAGCCACCCACTTGTCAGGCCACAGGCGTGTACTGCCCGAGAGTGAGCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS GCA 72 bp GGTCAAGTTCAGTCAGTCCGAAGAATCATGGGCGGGTaGTCGCTGTCCTCATCCAGGCGCAGGGCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: GQVQSVRRIMGG*SLSSSRRRALA
Trigger: GGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000471851.1
ENST00000479690.1
ENST00000484262.1
CDS GCA 72 bp GTCTACCCTGCGTGCTGCCTGTGGGAGAAGCTCATCTaGTGGGGCCCATCCTCCTCACTGCCGAGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: VYPACCLWEKLI*WGPSSSLPSLD
Trigger: ATCCAGGCTCGGCAGTGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGCACGCAGGGTAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp CGGTGCTGCTTCATCAGGGCACACTCGCCGCCCTCCTaGGGGTCCAGGTTGTACATGTACAGGTACCCGTCG +
Preference number: 6 (lower is better)
Translates to: RCCFIRAHSPPS*GSRLYMYRYPS
Trigger: CGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAGCAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000471851.1
ENST00000484262.1
CDS CCA 72 bp GCTCCGGGGTCTTCACTGGCTAACGATGTCAGAGGGTaGGCGGGTCCGTGCTTACCTCTCATCCCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: APGSSLANDVRG*AGPCLPLIPAA
Trigger: TGCTGCCGGGATGAGAGGTAAGCACGGACCCGCCCACCCTCTGACATCGTTAGCCAGTGAAGACCCCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp CTACGCGAGGGCTCTGTCTACCCTGCGTGCTGCCTGTaGGAGAAGCTCATCTGCTGGGGCCCATCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LREGSVYPACCL*EKLICWGPSSS
Trigger: TGAGGAGGATGGGCCCCAGCAGATGAGCTTCTCCCACAGGCAGCACGCAGGGTAGACAGAGCCCTCGCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS GCA 72 bp GGCCACAGGCAGAATCTGCGCTCAAAAACAAACACCTaGCTGGGCGACACGCAGGGCACAGCGCTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: GHRQNLRSKTNT*LGDTQGTALRV
Trigger: CACCCTCAGCGCTGTGCCCTGCGTGTCGCCCAGGCAGGTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS GCA 72 bp CAAATGTGGACCAGCTCTCCCGTCCCAGTGGCACACTaGAAGCTCCGCTCACTCTCGGGCAGTACACGCCTG +
Preference number: 6 (lower is better)
Translates to: QMWTSSPVPVAH*KLRSLSGSTRL
Trigger: CAGGCGTGTACTGCCCGAGAGTGAGCGGAGCTTGCAGTGTGCCACTGGGACGGGAGAGCTGGTCCACATTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS TCA 72 bp ATCCAGAAGCAGAATGAGCCAGACCTACTCTGCTACTaGGAAGAGAGCAGTGGGGCTGGGCGCGGGGCACCC +
Preference number: 6 (lower is better)
Translates to: IQKQNEPDLLCY*EESSGAGRGAP
Trigger: GGGTGCCCCGCGCCCAGCCCCACTGCTCTCTTCTCAGTAGCAGAGTAGGTCTGGCTCATTCTGCTTCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 72 bp TGCAAGCTCCGCTCACTCTCGGGCAGTACACGCCTGTaGCCTGACAAGTGGGTGGCTGTCTTTGCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: CKLRSLSGSTRL*PDKWVAVFASP
Trigger: GGGAGAAGCAAAGACAGCCACCCACTTGTCAGGCCACAGGCGTGTACTGCCCGAGAGTGAGCGGAGCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS GCA 72 bp TCACTGGCTAACGATGTCAGAGGGTGGGCGGGTCCGTaGTTACCTCTCATCCCGGCAGCAAGTGGGGACAAA +
Preference number: 6 (lower is better)
Translates to: SLANDVRGWAGP*LPLIPAASGDK
Trigger: TTTGTCCCCACTTGCTGCCGGGATGAGAGGTAAGCACGGACCCGCCCACCCTCTGACATCGTTAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp AGGGGCAGTCGTGAGAGGCAGAGTCCAAGATCTCATTaGTCGTTTCCAGACTGCCGTCCAGCCGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RGSRERQSPRSH*SFPDCRPAGAA
Trigger: AGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000471851.1
ENST00000484262.1
CDS CCA 72 bp AGGTCACAGGTCAAGTTCAGTCAGTCCGAAGAATCATaGGCGGGTGCTCGCTGTCCTCATCCAGGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: RSQVKFSQSEES*AGARCPHPGAG
Trigger: CCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000471851.1
ENST00000479690.1
ENST00000484262.1
CDS CCA 72 bp TCACTCTCGGGCAGTACACGCCTGTGGCCTGACAAGTaGGTGGCTGTCTTTGCTTCTCCCGGAGCTGGTAAG +
Preference number: 6 (lower is better)
Translates to: SLSGSTRLWPDK*VAVFASPGAGK
Trigger: CTTACCAGCTCCGGGAGAAGCAAAGACAGCCACCCACTTGTCAGGCCACAGGCGTGTACTGCCCGAGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 72 bp TTTCCCGAAGTACCCGGTCCAGGTGGTGGGCTCCTCTaGGGGTCTGGAAGGAAAGGCCACCAGACACATGAA +
Preference number: 6 (lower is better)
Translates to: FPEVPGPGGGLL*GSGRKGHQTHE
Trigger: TTCATGTGTCTGGTGGCCTTTCCTTCCAGACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS TCA 72 bp GCGCACACAGGCCTGCAGGGTTTGGAGGCGTCTCCCTaGTCGTATGCAGCACCTTCATGTCCCGAATGTTGT +
Preference number: 6 (lower is better)
Translates to: AHTGLQGLEASP*SYAAPSCPECC
Trigger: ACAACATTCGGGACATGAAGGTGCTGCATACGATCAGGGAGACGCCTCCAAACCCTGCAGGCCTGTGTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000465102.5
ENST00000466014.5
ENST00000475309.5
ENST00000480238.5
ENST00000484262.1
ENST00000496867.5
CDS TCA 72 bp TGTTGCTGGAGGCGGAGAGGAACATGCCGTCCATGCTaGAGGCCAGGGAGCAGATGCTCACGCACCTCTTTA +
Preference number: 6 (lower is better)
Translates to: CCWRRRGTCRPC*RPGSRCSRTSL
Trigger: TAAAGAGGTGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
ENST00000488359.1
CDS TCA 72 bp TGTCGTGAGGGGAACCTGAGGAGAGGCCATCTTCACTaGCAAAAGGATGTCCACCTGGGCCCTCCATGCCCT +
Preference number: 6 (lower is better)
Translates to: CREGNLRRGHLH*QKDVHLGPPCP
Trigger: AGGGCATGGAGGGCCCAGGTGGACATCCTTTTGTCAGTGAAGATGGCCTCTCCTCAGGTTCCCCTCACGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp AGGGGCAGTCGTGAGAGGCAGAGTCCAAGATCTCATTaGTCGTTTCCAGACTGCCGTCCAGCCTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: RGSRERQSPRSH*SFPDCRPAWRE
Trigger: TTCCCTCCAGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS CCA 72 bp GGACGGCCACCCCCTACTCACACAGACGCACAGCTCTaGAGCCGACAGCAAAAGTCTCCATTCTTCACAGGA +
Preference number: 6 (lower is better)
Translates to: GRPPPTHTDAQL*SRQQKSPFFTG
Trigger: TCCTGTGAAGAATGGAGACTTTTGCTGTCGGCTCCAGAGCTGTGCGTCTGTGTGAGTAGGGGGTGGCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp AGATCTCATTGGTCGTTTCCAGACTGCCGTCCAGCCTaGAGGGAAGAAAGCGACACAGCTCAGCGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: RSHWSFPDCRPA*REESDTAQRLH
Trigger: GTGGAGACGCTGAGCTGTGTCGCTTTCTTCCCTCCAGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS CCA 72 bp TCTCGGGCAGTACACGCCTGTGGCCTGACAAGTGGGTaGCTGTCTTTGCTTCTCCCGGAGCTGGTAAGTATA +
Preference number: 6 (lower is better)
Translates to: SRAVHACGLTSG*LSLLLPELVSI
Trigger: TATACTTACCAGCTCCGGGAGAAGCAAAGACAGCCACCCACTTGTCAGGCCACAGGCGTGTACTGCCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 72 bp TTCTACTACAAATGTGGACCAGCTCTCCCGTCCCAGTaGCACACTGCAAGCTCCGCTCACTCTCGGGCAGTA +
Preference number: 6 (lower is better)
Translates to: FYYKCGPALPSQ*HTASSAHSRAV
Trigger: TACTGCCCGAGAGTGAGCGGAGCTTGCAGTGTGCCACTGGGACGGGAGAGCTGGTCCACATTTGTAGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CAA 90 bp GGAGGCGTCTCCCTGATCGTATGCAGCACCTTCATGTCCCGAATGTaGTGGATGTACAGGGACTCCTCCAGGCATACTATCAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: GGVSLIVCSTFMSRM*WMYRDSSRHTISLC
Trigger: GCAGAGGCTGATAGTATGCCTGGAGGAGTCCCTGTACATCCACAACATTCGGGACATGAAGGTGCTGCATACGATCAGGGAGACGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000465102.5
ENST00000466014.5
ENST00000475309.5
ENST00000484262.1
ENST00000496867.5
CDS CAA 90 bp CAGGTGGTGGGCTCCTCTGGGGGTTTTTCTTTCACAGTCTCGAGTTaGAAGATGTGCACGGTCTCAGTGTTGCTGGAGGCGGAGAGGAAC +
Preference number: 6 (lower is better)
Translates to: QVVGSSGGFSFTVSS*KMCTVSVLLEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
CDS GCA 72 bp AGGCAGAGTCCAAGATCTCATTGGTCGTTTCCAGACTaGCGTCCAGCCTGGAGGGAAGAAAGCGACACAGCT +
Preference number: 6 (lower is better)
Translates to: RQSPRSHWSFPD*RPAWREESDTA
Trigger: AGCTGTGTCGCTTTCTTCCCTCCAGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS GCA 72 bp GAACATCTCCACATGGCTATGGCCACAGGCAGAATCTaGGCTCAAAAACAAACACCTGCCTGGGCGACACGC +
Preference number: 6 (lower is better)
Translates to: EHLHMAMATGRI*AQKQTPAWATR
Trigger: GCGTGTCGCCCAGGCAGGTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS GCA 72 bp GAAAGGCATCTCACCAAATTAATGGTATCGAAGACCTaGACCTCTCCGATGGTCGCGCTCCCTGGGTACGCC +
Preference number: 6 (lower is better)
Translates to: ERHLTKLMVSKT*TSPMVALPGYA
Trigger: GGCGTACCCAGGGAGCGCGACCATCGGAGAGGTGCAGGTCTTCGATACCATTAATTTGGTGAGATGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS GCA 72 bp TTCCTTCAAACATTCCCGTGGCGAGGAGCTCAGCACTaGTCTGAACGCCGCAGCAGATCCAGAAGCAGAATG +
Preference number: 6 (lower is better)
Translates to: FLQTFPWRGAQH*SERRSRSRSRM
Trigger: CATTCTGCTTCTGGATCTGCTGCGGCGTTCAGAGCAGTGCTGAGCTCCTCGCCACGGGAATGTTTGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CAA 90 bp GGAGGCGTCTCCCTGATCGTATGCAGCACCTTCATGTCCCGAATGTaGTGGATGTACAGGGACTCCTCCAGGCATACTATCAGCCTCATG +
Preference number: 6 (lower is better)
Translates to: GGVSLIVCSTFMSRM*WMYRDSSRHTISLM
Trigger: CATGAGGCTGATAGTATGCCTGGAGGAGTCCCTGTACATCCACAACATTCGGGACATGAAGGTGCTGCATACGATCAGGGAGACGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480238.5
CDS TCA 72 bp GCTCCTCTGGGGGTTTTTCTTTCACAGTCTCGAGTTTaGAGATGTGCACGGTCTCAGTGTTGCTGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: APLGVFLSQSRV*RCARSQCCWRR
Trigger: CCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
CDS TCA 72 bp AAGTACCTTTTCCTGCAGCTGCGCCGTATGTCTGAGTaGCTAAGGGGCAGTCGTGAGAGGCAGAGTCCAAGA +
Preference number: 6 (lower is better)
Translates to: KYLFLQLRRMSE*LRGSRERQSPR
Trigger: TCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAAAAGGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288828.9
ENST00000401525.7
ENST00000466014.5
ENST00000471851.1
ENST00000479690.1
CDS TCA 72 bp AGGACCTTGCCTCTAAGGTGGCTGTGTGAACAGAACTaGAAAAGTCTGTGGACGCCTTGGCACCAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: RTLPLRWLCEQN*KSLWTPWHQCS
Trigger: GGAGCACTGGTGCCAAGGCGTCCACAGACTTTTTCAGTTCTGTTCACACAGCCACCTTAGAGGCAAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS GCA 72 bp ATGTTTGCAGCTCTCAAATTAATGGTATCGAAGACCTaGACCTCTCCGATGGTCGCGCTCCCTGGGTACGCC +
Preference number: 6 (lower is better)
Translates to: MFAALKLMVSKT*TSPMVALPGYA
Trigger: GGCGTACCCAGGGAGCGCGACCATCGGAGAGGTGCAGGTCTTCGATACCATTAATTTGAGAGCTGCAAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000465102.5
ENST00000466014.5
ENST00000480238.5
ENST00000484262.1
ENST00000488359.1
ENST00000496867.5
CDS GCA 72 bp GCAATGCACAAAGTCCTCTGTGAAGCCAGTGTTCTCTaGTCCCCGGGTCAGAGGTCACAGGTCAAGTTCAGT +
Preference number: 6 (lower is better)
Translates to: AMHKVLCEASVL*SPGQRSQVKFS
Trigger: ACTGAACTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000471851.1
ENST00000479690.1
ENST00000484262.1
CDS GCA 72 bp ATGCACACATCTTCCGTATCGGGCGCCATCCTGCAGTaGGACACCACTTCAAATGGAACGGGCCATAAACAC +
Preference number: 6 (lower is better)
Translates to: MHTSSVSGAILQ*DTTSNGTGHKH
Trigger: GTGTTTATGGCCCGTTCCATTTGAAGTGGTGTCGCACTGCAGGATGGCGCCCGATACGGAAGATGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485854.5
CDS CCA 72 bp ATTCTTGTGGAAGCCGTCCATGTCTCTGCTTACCCGTaGGAAGGTAAGAGACGAGCCATTCACCCTAGTGGG +
Preference number: 6 (lower is better)
Translates to: ILVEAVHVSAYP*EGKRRAIHPSG
Trigger: CCCACTAGGGTGAATGGCTCGTCTCTTACCTTCCCACGGGTAAGCAGAGACATGGACGGCTTCCACAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CAA 72 bp GGCTCCTCTGGGGGTTTTTCTTTCACAGTCTCGAGTTaGAAGATGTGCACGGTCTCAGTGTTGCTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: GSSGGFSFTVSS*KMCTVSVLLEA
Trigger: CGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
CDS CAA 90 bp CAAAGGCCAGTGCCGCTAAAGGACTGTCGTGAGCCGGAATCATGTTaGCAGCTCTCTGAAAAAGGGACACCAATAAAGAGTGGCCACCGC +
Preference number: 6 (lower is better)
Translates to: QRPVPLKDCREPESC*QLSEKGTPIKSGHR
Trigger: GCGGTGGCCACTCTTTATTGGTGTCCCTTTTTCAGAGAGCTGCAAACATGATTCCGGCTCACGACAGTCCTTTAGCGGCACTGGCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS TCA 72 bp CGCTCCCTGGGTACGCCAAGTAGCAGTTGTCGTTGTTaGTTGACAGCGCACACAGGCCTCAAACTTGAAAGT +
Preference number: 6 (lower is better)
Translates to: RSLGTPSSSCRC*LTAHTGLKLES
Trigger: ACTTTCAAGTTTGAGGCCTGTGTGCGCTGTCAATCAACAACGACAACTGCTACTTGGCGTACCCAGGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488359.1
CDS GCA 72 bp GGGGGTTTTTCTTTCACAGTCTCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTGGAGGCGGAGAGGAAC +
Preference number: 6 (lower is better)
Translates to: GGFSFTVSSLKM*TVSVLLEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000466014.5
ENST00000484262.1
CDS GCA 72 bp TTGCTGAGCCAAGTCAGGATGCCAGGGACACCACAGTaGTCCTCTTCAGGAAAAAGCCACACTTTAGAGAGC +
Preference number: 6 (lower is better)
Translates to: LLSQVRMPGTPQ*SSSGKSHTLES
Trigger: GCTCTCTAAAGTGTGGCTTTTTCCTGAAGAGGAGCACTGTGGTGTCCCTGGCATCCTGACTTGGCTCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 72 bp CTGATCGTATGCAGCACCTTCATGTCCCGAATGTTGTaGATGTACAGGGACTCCTCCAGGCATACTATCAGC +
Preference number: 6 (lower is better)
Translates to: LIVCSTFMSRML*MYRDSSRHTIS
Trigger: GCTGATAGTATGCCTGGAGGAGTCCCTGTACATCCACAACATTCGGGACATGAAGGTGCTGCATACGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000465102.5
ENST00000466014.5
ENST00000475309.5
ENST00000480238.5
ENST00000484262.1
ENST00000496867.5
CDS CCA 72 bp TTACCCGGTGACCCAGCCGGGCTAGAAATGCTCGTGTaGAATTCTCCTGGGGGTTCTACTTGTTTGTTCATA +
Preference number: 6 (lower is better)
Translates to: LPGDPAGLEMLV*NSPGGSTCLFI
Trigger: TATGAACAAACAAGTAGAACCCCCAGGAGAATTCCACACGAGCATTTCTAGCCCGGCTGGGTCACCGGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465102.5
CDS CAA 72 bp TCCCTGATCGTATGCAGCACCTTCATGTCCCGAATGTaGTGGATGTACAGGGACTCCTCCAGGCATACTATC +
Preference number: 6 (lower is better)
Translates to: SLIVCSTFMSRM*WMYRDSSRHTI
Trigger: GATAGTATGCCTGGAGGAGTCCCTGTACATCCACAACATTCGGGACATGAAGGTGCTGCATACGATCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000288828.9
ENST00000382384.6
ENST00000401525.7
ENST00000404704.7
ENST00000465102.5
ENST00000466014.5
ENST00000475309.5
ENST00000480238.5
ENST00000484262.1
ENST00000496867.5
CDS TCA 72 bp CCGTATCGGCTGAAATCACAAAGGGAAGTACATGCGTaGACATCTCCACATGGCTATGGCCACAGGCAGAAT +
Preference number: 6 (lower is better)
Translates to: PYRLKSQREVHA*TSPHGYGHRQN
Trigger: ATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCACGCATGTACTTCCCTTTGTGATTTCAGCCGATACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS TCA 72 bp CATATCCAAATCAAAGTAAAGGTCATCGGTGGCCAATaGAGAGCGGAGAAAACGGAGGCGGGAGAACAGACG +
Preference number: 6 (lower is better)
Translates to: HIQIKVKVIGGQ*RAEKTEAGEQT
Trigger: CGTCTGTTCTCCCGCCTCCGTTTTCTCCGCTCTTCATTGGCCACCGATGACCTTTACTTTGATTTGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS GCA 72 bp ACTCACTTTTCTTTCACAGTCTCGAGTTTGAAGATGTaGACGGTCTCAGTGTTGCTGGAGGCGGAGAGGAAC +
Preference number: 6 (lower is better)
Translates to: THFSFTVSSLKM*TVSVLLEAERN
Trigger: GTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488359.1
CDS CCA 72 bp CTCCTCTGGACATTTCTGTATTTTCTACTACAAATGTaGACCAGCTCTCCCGTCCCAGTGGCACACTGCAAG +
Preference number: 6 (lower is better)
Translates to: LLWTFLYFLLQM*TSSPVPVAHCK
Trigger: CTTGCAGTGTGCCACTGGGACGGGAGAGCTGGTCCACATTTGTAGTAGAAAATACAGAAATGTCCAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS TCA 72 bp AACACCATTACGGTCCAAACAAATGCCAAACCCACTTaGTTTACTGGGGCTGGGCATCCAAGGAAATGCTGC +
Preference number: 6 (lower is better)
Translates to: NTITVQTNAKPT*FTGAGHPRKCC
Trigger: GCAGCATTTCCTTGGATGCCCAGCCCCAGTAAATCAAGTGGGTTTGGCATTTGTTTGGACCGTAATGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CCA 72 bp AAGGGAAGTACATGCGTGAACATCTCCACATGGCTATaGCCACAGGCAGAATCTGCGCTCAAAAACAAACAC +
Preference number: 6 (lower is better)
Translates to: KGSTCVNISTWL*PQAESALKNKH
Trigger: GTGTTTGTTTTTGAGCGCAGATTCTGCCTGTGGCCATAGCCATGTGGAGATGTTCACGCATGTACTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS CAA 72 bp GTGCCGCTAAAGGACTGTCGTGAGCCGGAATCATGTTaGCAGCTCTCTGAAAAAGGGACACCAATAAAGAGT +
Preference number: 6 (lower is better)
Translates to: VPLKDCREPESC*QLSEKGTPIKS
Trigger: ACTCTTTATTGGTGTCCCTTTTTCAGAGAGCTGCAAACATGATTCCGGCTCACGACAGTCCTTTAGCGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS CAA 72 bp CCCCTCATGCTACACATTCATTGCGATAATAAATTCTaGTGGAAGCCGTCCATGTCTCTGCTTACCCGTGGG +
Preference number: 6 (lower is better)
Translates to: PLMLHIHCDNKF*WKPSMSLLTRG
Trigger: CCCACGGGTAAGCAGAGACATGGACGGCTTCCACAAGAATTTATTATCGCAATGAATGTGTAGCATGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS CCA 72 bp CTCATGCTACACATTCATTGCGATAATAAATTCTTGTaGAAGCCGTCCATGTCTCTGCTTACCCGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: LMLHIHCDNKFL*KPSMSLLTRGK
Trigger: CTTCCCACGGGTAAGCAGAGACATGGACGGCTTCCACAAGAATTTATTATCGCAATGAATGTGTAGCATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471851.1
CDS TCA 72 bp CAATCTCTCTACAATGCACACATCTTCCGTATCGGCTaGAATCACAAAGGGAAGTACATGCGTGAACATCTC +
Preference number: 6 (lower is better)
Translates to: QSLYNAHIFRIG*NHKGKYMREHL
Trigger: GAGATGTTCACGCATGTACTTCCCTTTGTGATTTCAGCCGATACGGAAGATGTGTGCATTGTAGAGAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475309.5
ENST00000484262.1
CDS CCA 72 bp TGTGGTCACATGACCAGCATCAGTAGGAAGGCAGCTTaGTTTGGGATCAATACTTTTAAAATCTGTCTCATC +
Preference number: 6 (lower is better)
Translates to: CGHMTSISRKAA*FGINTFKICLI
Trigger: GATGAGACAGATTTTAAAAGTATTGATCCCAAACCAAGCTGCCTTCCTACTGATGCTGGTCATGTGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488359.1
CDS CAA 90 bp GGGCTAGAAATGCTCGTGTGGAATTCTCCTGGGGGTTCTACTTGTTaGTTCATAGATAACATAAAACTGAAATCCAAATACAACCTCCAG +
Preference number: 6 (lower is better)
Translates to: GLEMLVWNSPGGSTC*FIDNIKLKSKYNLQ
Trigger: CTGGAGGTTGTATTTGGATTTCAGTTTTATGTTATCTATGAACAAACAAGTAGAACCCCCAGGAGAATTCCACACGAGCATTTCTAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465102.5
CDS TCA 72 bp TTGCTTTTACCAGAAAGCTGTCATAAACCTTCTTTCTaGCAACAGCAAGCGACCTTCATTCAAAAGGAACAG +
Preference number: 6 (lower is better)
Translates to: LLLPESCHKPSF*QQQATFIQKEQ
Trigger: CTGTTCCTTTTGAATGAAGGTCGCTTGCTGTTGTCAGAAAGAAGGTTTATGACAGCTTTCTGGTAAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485854.5
CDS CCA 72 bp AAACTGAAATCCAAATACAACCTCCAGAATCCATTCTaGACATTCACGTACTTTACCTCTTTACTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: KLKSKYNLQNPF*TFTYFTSLLLS
Trigger: GGAGAGGAGTAAAGAGGTAAAGTACGTGAATGTCCAGAATGGATTCTGGAGGTTGTATTTGGATTTCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465102.5
CDS GCA 72 bp ATTCATCACGCCGTGGCAACTTTAATCTCGTCTATCTaGACACGTTTTTACATGAAGAGTTTTACATGGAAA +
Preference number: 6 (lower is better)
Translates to: IHHAVATLISSI*TRFYMKSFTWK
Trigger: TTTCCATGTAAAACTCTTCATGTAAAAACGTGTGCAGATAGACGAGATTAAAGTTGCCACGGCGTGATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479690.1
CDS CAA 72 bp ATGCTCGTGTGGAATTCTCCTGGGGGTTCTACTTGTTaGTTCATAGATAACATAAAACTGAAATCCAAATAC +
Preference number: 6 (lower is better)
Translates to: MLVWNSPGGSTC*FIDNIKLKSKY
Trigger: GTATTTGGATTTCAGTTTTATGTTATCTATGAACAAACAAGTAGAACCCCCAGGAGAATTCCACACGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465102.5
CDS CAA 90 bp AAATACACTGAAATGTGTTCAGACTGGCTGGATAGAATTCTGTCTTaGCTTTTTCACATTTCATCACTGTCTGGGTTCTTTACTGTTATG +
Preference number: 6 (lower is better)
Translates to: KYTEMCSDWLDRILS*LFHISSLSGFFTVM
Trigger: CATAACAGTAAAGAACCCAGACAGTGATGAAATGTGAAAAAGCAAAGACAGAATTCTATCCAGCCAGTCTGAACACATTTCAGTGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475309.5
CDS TCA 72 bp CAAGTGTTTTTGAACTTAGACAAATGTCATGCAGAGTaGAAAAGGATAAATTATACCCATAGTAGGATCCCA +
Preference number: 6 (lower is better)
Translates to: QVFLNLDKCHAE*KRINYTHSRIP
Trigger: TGGGATCCTACTATGGGTATAATTTATCCTTTTTCACTCTGCATGACATTTGTCTAAGTTCAAAAACACTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475309.5