RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WIPF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000122574

Ensembl transcript IDs: ENST00000242140.9, ENST00000409123.5

Found 422 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCCTGTACTGCAAAATGGAAGCGAGACATGGCACCTCGTTCCCTaGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTC +
Preference number: 1 (lower is better)
Translates to: FPVLQNGSETWHLVP*RLRGTVWVWGTRYF
Trigger: GAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATTTTGCAGTACAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR TCA 90 bp AGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGAGTGGCTaGGCTTGCACACATCTCCCCACAGACAGGTGCCCACCACAAGGG +
Preference number: 1 (lower is better)
Translates to: RAGPARPDLFHIQSG*ACTHLPTDRCPPQG
Trigger: CCCTTGTGGTGGGCACCTGTCTGTGGGGAGATGTGTGCAAGCTCAGCCACTCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 90 bp GTTGTCAGGCAAGGTTCTCCTTTAGCTCAGAAGGGAGCTAGGTTTTaGCTGACGGGTGGCTCCAAGGATCCTAAGATGGGGGCAGTGAGG +
Preference number: 1 (lower is better)
Translates to: VVRQGSPLAQKGARF*LTGGSKDPKMGAVR
Trigger: CCTCACTGCCCCCATCTTAGGATCCTTGGAGCCACCCGTCAGGCAAAACCTAGCTCCCTTCTGAGCTAAAGGAGAACCTTGCCTGACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CCA 90 bp GGGCCAGCCTGCAAGCAGATTCACAGTCATGGAGTGGGCACTAGGTaGAGGGACAGGGCTCTATCTGTGCTGACAAATGCCAAGATGCAA +
Preference number: 1 (lower is better)
Translates to: GPACKQIHSHGVGTR*RDRALSVLTNAKMQ
Trigger: TTGCATCTTGGCATTTGTCAGCACAGATAGAGCCCTGTCCCTCCACCTAGTGCCCACTCCATGACTGTGAATCTGCTTGCAGGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR TCA 90 bp AGCTTGCACACATCTCCCCACAGACAGGTGCCCACCACAAGGGAATaGATGTGGAGTTGTCAGGCAAGGTTCTCCTTTAGCTCAGAAGGG +
Preference number: 1 (lower is better)
Translates to: SLHTSPHRQVPTTRE*MWSCQARFSFSSEG
Trigger: CCCTTCTGAGCTAAAGGAGAACCTTGCCTGACAACTCCACATTCATTCCCTTGTGGTGGGCACCTGTCTGTGGGGAGATGTGTGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 90 bp AGTGAGGCAGATGCAGTCATGTTTGCCCACACCCTCCTGACCGGCTaGCTTTCTGGATGGCTTGGTCTGTTCATGATATACTTCAGGGGT +
Preference number: 1 (lower is better)
Translates to: SEADAVMFAHTLLTG*LSGWLGLFMIYFRG
Trigger: ACCCCTGAAGTATATCATGAACAGACCAAGCCATCCAGAAAGGCAGCCGGTCAGGAGGGTGTGGGCAAACATGACTGCATCTGCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CCA 90 bp GCAGTCATGTTTGCCCACACCCTCCTGACCGGCTGCCTTTCTGGATaGCTTGGTCTGTTCATGATATACTTCAGGGGTGAATGTGTGCGT +
Preference number: 1 (lower is better)
Translates to: AVMFAHTLLTGCLSG*LGLFMIYFRGECVR
Trigger: ACGCACACATTCACCCCTGAAGTATATCATGAACAGACCAAGCCATCCAGAAAGGCAGCCGGTCAGGAGGGTGTGGGCAAACATGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CCA 90 bp AGCACTGGCTACTTGGAGGATTATTCAGTTACAAAAGGGGCCCTGTaGTTGGCATCGGAGGGCCAAGCCCACTCTTGCCTTTACTTTGTG +
Preference number: 1 (lower is better)
Translates to: STGYLEDYSVTKGAL*LASEGQAHSCLYFV
Trigger: CACAAAGTAAAGGCAAGAGTGGGCTTGGCCCTCCGATGCCAACCACAGGGCCCCTTTTGTAACTGAATAATCCTCCAAGTAGCCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 90 bp GCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTaGATCATTGATAAGGCATTATTTGGTTTGATTTTGCAGTTAGTG +
Preference number: 1 (lower is better)
Translates to: ARHCLGVGDTLLPLS*IIDKALFGLILQLV
Trigger: CACTAACTGCAAAATCAAACCAAATAATGCCTTATCAATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 90 bp TTTACAGTCAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTaGACCAGCATGAGCTCGAAGGGTTGTGAATTCAGTGATAGGTCT +
Preference number: 1 (lower is better)
Translates to: FTVKGLNLYSAQGTQ*TSMSSKGCEFSDRS
Trigger: AGACCTATCACTGAATTCACAACCCTTCGAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTGACTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 90 bp GCCACTTCAGCCAGAGGGAAAGGGATTTACAACAATAAGAGGAGGTaGAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAG +
Preference number: 1 (lower is better)
Translates to: ATSARGKGIYNNKRR*NNGCPSLYLYLCDQ
Trigger: CTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACCTCCTCTTATTGTTGTAAATCCCTTTCCCTCTGGCTGAAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CCA 90 bp TACATCAGACAGATTCTGCCAATGCAATTGTTGTCCACAGATTCCTaGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGT +
Preference number: 1 (lower is better)
Translates to: YIRQILPMQLLSTDS*CFLLCHLLRILSTC
Trigger: ACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR GCA 90 bp GGCCATCATAACCAAGGAAGAATGGGAAGTGATTGGCATGATTGTTaGAGAATGTCAGAGTTGCTAAACTTGCTTCTATATGTAGTGGTG +
Preference number: 1 (lower is better)
Translates to: GHHNQGRMGSDWHDC*RMSELLNLLLYVVV
Trigger: CACCACTACATATAGAAGCAAGTTTAGCAACTCTGACATTCTGCAACAATCATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR GCA 90 bp GTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATaGAATTGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATC +
Preference number: 1 (lower is better)
Translates to: VPKYMRQITSDRFCQ*NCCPQIPGAFSSAI
Trigger: GATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR TCA 90 bp CTTGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTGCAAGTaGCTCTGTAGTCTGTCACATAGTATTCAGAAATGGGGAGATTAT +
Preference number: 1 (lower is better)
Translates to: LDVPHSCRIAWFNCK*LCSLSHSIQKWGDY
Trigger: ATAATCTCCCCATTTCTGAATACTATGTGACAGACTACAGAGTCACTTGCAGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CCA 90 bp GTTTTTCTCACAGGCCATCATAACCAAGGAAGAATGGGAAGTGATTaGCATGATTGTTGCAGAATGTCAGAGTTGCTAAACTTGCTTCTA +
Preference number: 1 (lower is better)
Translates to: VFLTGHHNQGRMGSD*HDCCRMSELLNLLL
Trigger: TAGAAGCAAGTTTAGCAACTCTGACATTCTGCAACAATCATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCCTGTGAGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR TCA 90 bp CCTTCTAGTTCTGTTCATTTCTTGTGGGTACTAGTACTTGAATTGTaGCTAAATTTGGCCAAAATCAATTATAACATTGGTGGGGGAAAA +
Preference number: 1 (lower is better)
Translates to: PSSSVHFLWVLVLEL*LNLAKINYNIGGGK
Trigger: TTTTCCCCCACCAATGTTATAATTGATTTTGGCCAAATTTAGTCACAATTCAAGTACTAGTACCCACAAGAAATGAACAGAACTAGAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR TCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCCTGGGATTACCTGCATaGGCCACTGCTCCTGGCCCG +
Preference number: 2 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELLGLPA*ATAPGP
Trigger: CGGGCCAGGAGCAGTGGCTCATGCAGGTAATCCCAG...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGTGTTGTTCTGCAACCTaGAACCCCAGGACCTTCGCT +
Preference number: 2 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWCCSAT*NPRTFA
Trigger: AGCGAAGGTCCTGGGGTTCCAGGTTGCAGAACAACA...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGAAAGGGGCCCTGTGGTTaGCATCGGAGGGCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRKGPCG*HRRAKP
Trigger: GGGCTTGGCCCTCCGATGCCAACCACAGGGCCCCTT...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGGGCTCTATCTGTGCTaGCAAATGCCAAGATGCAAT +
Preference number: 2 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWGLYLC*QMPRCN
Trigger: ATTGCATCTTGGCATTTGTCAGCACAGATAGAGCCC...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCAGCTTGAGCATGGGGTaGGTGGGGTCTGACATGTTG +
Preference number: 2 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELSLSMG*VGSDML
Trigger: CAACATGTCAGACCCCACCCACCCCATGCTCAAGCT...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCCTACTGGGATGGGACTaGGAACTTGGAGGGAACAGG +
Preference number: 2 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELLLGWD*ELGGNR
Trigger: CCTGTTCCCTCCAAGTTCCCAGTCCCATCCCAGTAG...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp CCACCTTGGCTCCTGCAAGCTGTATGCAAGCTGCTCCAGGAACACGTGCCCAGTCCCTTACCATTTCTGTaGCTCCTGAGGAGAATTCCT +
Preference number: 2 (lower is better)
Translates to: PPWLLQAVCKLLQEHVPSPLPFL*LLRRIP
Trigger: AGGAATTCTCCTCAGGAGGCACAGAAATGGTAAGGG...ACTGGGCACGTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR TCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTAGGACCAGCCCGGCCTaGCCTTTTCCATATTCAGAG +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGRTSPA*PFPYSE
Trigger: CTCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCT...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGAATTCCAAGCCTGTATaGCAACTGAATTACAGCTTG +
Preference number: 2 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWNSKPV*QLNYSL
Trigger: CAAGCTGTAATTCAGTTGGCATACAGGCTTGGAATT...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGTGGCACCTCGTTCCCTaGAGGCTGCGCGGCACTGTC +
Preference number: 2 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRWHLVP*RLRGTV
Trigger: GACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCA...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTAATGGAAGCGAGACATaGCACCTCGTTCCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGNGSET*HLVPWR
Trigger: CCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCCATAAAGCTGGCTACTaGGATGGGACTGGGAACTTG +
Preference number: 2 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELHKAGY*DGTGNL
Trigger: CAAGTTCCCAGTCCCATCCCAGTAGCCAGCTTTATG...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CAA 90 bp GACTTGGGCACGAGGGACACTGTAAACAGTAGGAGCACTGGCTACTaGGAGGATTATTCAGTTACAAAAGGGGCCCTGTGGTTGGCATCG +
Preference number: 2 (lower is better)
Translates to: DLGTRDTVNSRSTGY*EDYSVTKGALWLAS
Trigger: CGATGCCAACCACAGGGCCCCTTTTGTAACTGAATAATCCTCCAAGTAGCCAGTGCTCCTACTGTTTACAGTGTCCCTCGTGCCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CAA 90 bp ATGGGACTGGGAACTTGGAGGGAACAGGATGAAAGTGACAGAGACTaGGGCACGAGGGACACTGTAAACAGTAGGAGCACTGGCTACTTG +
Preference number: 2 (lower is better)
Translates to: MGLGTWREQDESDRD*GTRDTVNSRSTGYL
Trigger: CAAGTAGCCAGTGCTCCTACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCTCCAAGTTCCCAGTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGCAGGACACCACCTaGGTCGTTACTCCAGACAAC +
Preference number: 2 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFLQDTT*VVTPDN
Trigger: GTTGTCTGGAGTAACGACTCAGGTGGTGTCCTGCAG...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAACAAAAGGGGCCCTGTaGTTGGCATCGGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSTKGAL*LASEGQ
Trigger: TTGGCCCTCCGATGCCAACCACAGGGCCCCTTTTGT...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTCAGCCTCCCATGCTaGGATTACCTGCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFLSLPC*DYLHEP
Trigger: TGGCTCATGCAGGTAATCCCAGCATGGGAGGCTGAG...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CAA 90 bp ACTGGCTACTTGGAGGATTATTCAGTTACAAAAGGGGCCCTGTGGTaGGCATCGGAGGGCCAAGCCCACTCTTGCCTTTACTTTGTGATG +
Preference number: 2 (lower is better)
Translates to: TGYLEDYSVTKGALW*ASEGQAHSCLYFVM
Trigger: CATCACAAAGTAAAGGCAAGAGTGGGCTTGGCCCTCCGATGCCAACCACAGGGCCCCTTTTGTAACTGAATAATCCTCCAAGTAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTGAGCTAGGTTTTGCCTaGCGGGTGGCTCCAAGGATC +
Preference number: 2 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISELGFA*RVAPRI
Trigger: GATCCTTGGAGCCACCCGTCAGGCAAAACCTAGCTC...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAAGGGAGCTAGGTTTTaGCTGACGGGTGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSKGARF*LTGGSK
Trigger: CTTGGAGCCACCCGTCAGGCAAAACCTAGCTCCCTT...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGAATAAGAAGCCGTTGTaGATATTTATAACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWNKKPL*IFITLG
Trigger: CCCCAAAGTTATAAATATCCACAACGGCTTCTTATT...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTCCCTGTACTGCAAAATaGAAGCGAGACATGGCACCT +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGPCTAK*KRDMAP
Trigger: AGGTGCCATGTCTCGCTTCCATTTTGCAGTACAGGG...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGGGGGTGGGTGGGGTCTaGCATGTTGTTCTGCAACCT +
Preference number: 2 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRGVGGV*HVVLQP
Trigger: AGGTTGCAGAACAACATGTCAGACCCCACCCACCCC...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTACACGCTACTTCCTCTaGGCTGCATCATTGATAAGG +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGTRYFL*AASLIR
Trigger: CCTTATCAATGATGCAGCTCAGAGGAAGTAGCGTGT...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCATGTTTCATTCTGGCTTaGAAAAAGGTCCACCAAATG +
Preference number: 2 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPCFILA*KKVHQM
Trigger: CATTTGGTGGACCTTTTTTCAAGCCAGAATGAAACA...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCTCAGGGGTGAATGTGTaGGTGGGTTGTTGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFSGVNV*VGCCKA
Trigger: TGCTTTGCAACAACCCACGCACACATTCACCCCTGA...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTGAGAAAGCACAGCACTaGTGCAGGACACCACCTGAG +
Preference number: 2 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISEKAQH*CRTPPE
Trigger: CTCAGGTGGTGTCCTGCAGCAGTGCTGTGCTTTCTC...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTCAAGGGGAGATGGGATaGCACATTCCTGAGATTTCT +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGQGEMG*HIPEIS
Trigger: AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTG...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTGGCTTGGTCTGTTCATaGTATACTTCAGGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGGLVCS*YTSGVN
Trigger: ATTCACCCCTGAAGTATATCATGAACAGACCAAGCC...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGGGCACTGTCTGGGTGTaGGGGACACGCTACTTCCTC +
Preference number: 2 (lower is better)
Translates to: LICREEIPKSHKAGYWDGGTVWV*GTRYFL
Trigger: GAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCC...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CAA 90 bp CCTAGCTTCCAGGAACCTAGCCTCTTCCTTCTCAGGTCACTTTCCTaGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTGCAAGT +
Preference number: 2 (lower is better)
Translates to: PSFQEPSLFLLRSLS*MFHTVAELPGLTAS
Trigger: ACTTGCAGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAGAAGGAAGAGGCTAGGTTCCTGGAAGCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTAACTTTGGGGCTACCTaGAAACTAAGGACTCTCTAC +
Preference number: 2 (lower is better)
Translates to: REQDESDRDLGTRDTVNSNFGAT*KLRTLY
Trigger: GTAGAGAGTCCTTAGTTTGCAGGTAGCCCCAAAGTT...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR TCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTTACTCCAGACAACAGTaGGGCAGATGCAGTCATGTT +
Preference number: 2 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISYSRQQ*GRCSHV
Trigger: AACATGACTGCATCTGCCTCACTGTTGTCTGGAGTA...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGTCGTTCCCTGGAGGCTaGGCGGCACTGTCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: MFLICREEIPKSHKAGYWSFPGG*AALSGC
Trigger: ACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGA...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTATGTCATATTTTCCATaGAAGTCCACACTCGAAGCA +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGMSYFP*KSTLEA
Trigger: TGCTTCGAGTGTGGACTTCCATGGAAAATATGACAT...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCTTTCCATATTCAGAGTaGCTGAGCTTGCACACATCT +
Preference number: 2 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFFPYSE*LSLHTS
Trigger: AGATGTGTGCAAGCTCAGCCACTCTGAATATGGAAA...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATTTTTTGTGCCCACCTTaGCTCCTGCAAGCTGTATGC +
Preference number: 2 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNFLCPP*LLQAVC
Trigger: GCATACAGCTTGCAGGAGCCAAGGTGGGCACAAAAA...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTATCTGTGCTGACAAATaGCAAGATGCAATGCAAAAA +
Preference number: 2 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGICADK*QDAMQK
Trigger: TTTTTGCATTGCATCTTGGCATTTGTCAGCACAGAT...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTACTTCCTCTGAGCTaGATCATTGATAAGGCATTA +
Preference number: 2 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFLLPLS*IIDKAL
Trigger: TAATGCCTTATCAATGATGCAGCTCAGAGGAAGTAG...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CAA 90 bp GGAAGAATGGGAAGTGATTGGCATGATTGTTGCAGAATGTCAGAGTaGCTAAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GRMGSDWHDCCRMSE*LNLLLYVVVIPGKP
Trigger: GGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTTAGCAACTCTGACATTCTGCAACAATCATGCCAATCACTTCCCATTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTAAAAATTCCCTGTACTaGAAAATGGAAGCGAGACAT +
Preference number: 2 (lower is better)
Translates to: REQDESDRDLGTRDTVNSKNSLY*KMEARH
Trigger: ATGTCTCGCTTCCATTTTGCAGTACAGGGAATTTTT...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGGAGTGGGCACTAGGTaGAGGGACAGGGCTCTATCT +
Preference number: 2 (lower is better)
Translates to: MFLICREEIPKSHKAGYWGVGTR*RDRALS
Trigger: AGATAGAGCCCTGTCCCTCCACCTAGTGCCCACTCC...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CCA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACCGGTTCAAGATGCCCTaGGTGAGATTAAAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNRFKMP*VRLKVF
Trigger: AAACACCTTTAATCTCACCCAGGGCATCTTGAACCG...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CAA 90 bp TTCCTTCTCAGGTCACTTTCCTTGATGTTCCACACAGTTGCAGAATaGCCTGGTTTAACTGCAAGTGACTCTGTAGTCTGTCACATAGTA +
Preference number: 2 (lower is better)
Translates to: FLLRSLSLMFHTVAE*PGLTASDSVVCHIV
Trigger: TACTATGTGACAGACTACAGAGTCACTTGCAGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAGAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTGATGTTCCACACAGTTaGAGAATTGCCTGGTTTAAC +
Preference number: 2 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSDVPHS*RIAWFN
Trigger: GTTAAACCAGGCAATTCTGCAACTGTGTGGAACATC...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CAA 90 bp GGTGTTTCTTCAAGGACTGTCTTATCACAAAAGCAGCTGTCTGGCTaGCCTTCTAGTTCTGTTCATTTCTTGTGGGTACTAGTACTTGAA +
Preference number: 2 (lower is better)
Translates to: GVSSRTVLSQKQLSG*PSSSVHFLWVLVLE
Trigger: TTCAAGTACTAGTACCCACAAGAAATGAACAGAACTAGAAGGCAAGCCAGACAGCTGCTTTTGTGATAAGACAGTCCTTGAAGAAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CAA 90 bp ATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGTaGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: IHETNYIRQILPMQL*STDSWCFLLCHLLR
Trigger: TCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTGATTGGCATGATTGTTaGAGAATGTCAGAGTTGCTA +
Preference number: 2 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSDWHDC*RMSELL
Trigger: TAGCAACTCTGACATTCTGCAACAATCATGCCAATC...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CAA 90 bp AAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATaGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTC +
Preference number: 2 (lower is better)
Translates to: KIHETNYIRQILPMQ*LSTDSWCFLLCHLL
Trigger: GAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR TCA 90 bp CTGTGCCTTTCCCTGGGCATATGTGGTCACTTTCTAATTTTCATCATATATGTACATTTCTGTGCCTCCTaGGGAGAATTCCTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: LCLSLGICGHFLIFIIYVHFCAS*GEFLVL
Trigger: TAAAACCAGGAATTCTCCTCAGGAGGCACAGAAATG...TACATATATGATGAAAATTAGAAAGTGACCACATATGCCCAGGGAAAGGCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGTCTGACATGTTGTTCTaGAACCTGGAACCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: MFLICREEIPKSHKAGYWSDMLF*NLEPQD
Trigger: GTCCTGGGGTTCCAGGTTGCAGAACAACATGTCAGA...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR GCA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATTCTAAGAATCGTTACTaGAATTCTTGCATCAGCTGT +
Preference number: 2 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNSKNRY*NSCISC
Trigger: ACAGCTGATGCAAGAATTGCAGTAACGATTCTTAGA...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGTCCACAGATTCCTGGTaGTTTCTCCTCTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: SSKIHETNYIRQILPMQLSTDSW*FLLCHL
Trigger: AAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGA...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR GCA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGTGGTGCTTTCTCCTCTaGCATCTTCTCAGAATTCTC +
Preference number: 2 (lower is better)
Translates to: SSKIHETNYIRQILPMQLWCFLL*HLLRIL
Trigger: GAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCA...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CCA 72 bp CTGCAAAATGGAAGCGAGACATGGCACCTCGTTCCCTaGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACA +
Preference number: 3 (lower is better)
Translates to: LQNGSETWHLVP*RLRGTVWVWGT
Trigger: TGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATTTTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 72 bp TGTGCCCACCTTGGCTCCTGCAAGCTGTATGCAAGCTaGTCCAGGAACACGTGCCCAGTTGCCTGCCATGGG +
Preference number: 3 (lower is better)
Translates to: CAHLGSCKLYAS*SRNTCPVACHG
Trigger: CCCATGGCAGGCAACTGGGCACGTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR TCA 72 bp CCAGCCCGGCCTGACCTTTTCCATATTCAGAGTGGCTaGGCTTGCACACATCTCCCCACAGACAGGTGCCCA +
Preference number: 3 (lower is better)
Translates to: PARPDLFHIQSG*ACTHLPTDRCP
Trigger: TGGGCACCTGTCTGTGGGGAGATGTGTGCAAGCTCAGCCACTCTGAATATGGAAAAGGTCAGGCCGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR TCA 72 bp CAAGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTaGCCTTTTCCATATTCAGAGTGGCTGAGCTTGCAC +
Preference number: 3 (lower is better)
Translates to: QEEGVKSRTSPA*PFPYSEWLSLH
Trigger: GTGCAAGCTCAGCCACTCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGACAACTGAATTACAGCTaGAGCATGGGGTGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRQLNYS*SMGWVG
Trigger: CCCCACCCACCCCATGCTCAAGCTGTAATTCAGTTG...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 72 bp CAAGGTTCTCCTTTAGCTCAGAAGGGAGCTAGGTTTTaGCTGACGGGTGGCTCCAAGGATCCTAAGATGGGG +
Preference number: 3 (lower is better)
Translates to: QGSPLAQKGARF*LTGGSKDPKMG
Trigger: CCCCATCTTAGGATCCTTGGAGCCACCCGTCAGGCAAAACCTAGCTCCCTTCTGAGCTAAAGGAGAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CCA 72 bp TGCAAGCAGATTCACAGTCATGGAGTGGGCACTAGGTaGAGGGACAGGGCTCTATCTGTGCTGACAAATGCC +
Preference number: 3 (lower is better)
Translates to: CKQIHSHGVGTR*RDRALSVLTNA
Trigger: GGCATTTGTCAGCACAGATAGAGCCCTGTCCCTCCACCTAGTGCCCACTCCATGACTGTGAATCTGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCACTCAGGTCACTTTCCTaGATGTTCCACACAGTTGCA +
Preference number: 3 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPLRSLS*MFHTVA
Trigger: TGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR TCA 72 bp ACATCTCCCCACAGACAGGTGCCCACCACAAGGGAATaGATGTGGAGTTGTCAGGCAAGGTTCTCCTTTAGC +
Preference number: 3 (lower is better)
Translates to: TSPHRQVPTTRE*MWSCQARFSFS
Trigger: GCTAAAGGAGAACCTTGCCTGACAACTCCACATTCATTCCCTTGTGGTGGGCACCTGTCTGTGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR TCA 72 bp ACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATaGGCTCGAAGGGTTGTGAATTCAGTGATAGGTCTC +
Preference number: 3 (lower is better)
Translates to: TFTAPKGLSAPA*ARRVVNSVIGL
Trigger: GAGACCTATCACTGAATTCACAACCCTTCGAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CCA 72 bp TTTGCCCACACCCTCCTGACCGGCTGCCTTTCTGGATaGCTTGGTCTGTTCATGATATACTTCAGGGGTGAA +
Preference number: 3 (lower is better)
Translates to: FAHTLLTGCLSG*LGLFMIYFRGE
Trigger: TTCACCCCTGAAGTATATCATGAACAGACCAAGCCATCCAGAAAGGCAGCCGGTCAGGAGGGTGTGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTGTGGGGTCTGACATGTaGTTCTGCAACCTGGAACCC +
Preference number: 3 (lower is better)
Translates to: REQDESDRDLGTRDTVNSVGSDM*FCNLEP
Trigger: GGGTTCCAGGTTGCAGAACAACATGTCAGACCCCAC...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTTTGACCCTGGCTCACTaGCTTCCATCTGGAATGAGA +
Preference number: 3 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGLTLAH*LPSGMR
Trigger: TCTCATTCCAGATGGAAGCAAGTGAGCCAGGGTCAA...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 72 bp AAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTaGACCAGCATGAGCTCGAAGGGTTGTGAATTCAGT +
Preference number: 3 (lower is better)
Translates to: KGLNLYSAQGTQ*TSMSSKGCEFS
Trigger: ACTGAATTCACAACCCTTCGAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAGAAAGTGACAGAGACTaGGGCACGAGGGACACTGTA +
Preference number: 3 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSESDRD*GTRDTV
Trigger: TACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTC...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCGGGTTCAAGCAATTCTaGTGCCTGAACCTCCCAAGT +
Preference number: 3 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFGFKQF*CLNLPS
Trigger: ACTTGGGAGGTTCAGGCACAAGAATTGCTTGAACCC...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR TCA 72 bp CCTCCCTGCCTGATTTCCTTTAAAGGGCAGCTATTTTaGGCACAGCCCAGGGATCAGTCTGTTTCCTTCTAT +
Preference number: 3 (lower is better)
Translates to: PPCLISFKGQLF*AQPRDQSVSFY
Trigger: ATAGAAGGAAACAGACTGATCCCTGGGCTGTGCTCAAAATAGCTGCCCTTTAAAGGAAATCAGGCAGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGAGCCAATAAGAAGCCGTaGTGGATATTTATAACTTTG +
Preference number: 3 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRANKKP*WIFITL
Trigger: CAAAGTTATAAATATCCACAACGGCTTCTTATTGGC...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 72 bp TGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTaGATCATTGATAAGGCATTATTTGGTTTGATTTTG +
Preference number: 3 (lower is better)
Translates to: CLGVGDTLLPLS*IIDKALFGLIL
Trigger: CAAAATCAAACCAAATAATGCCTTATCAATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CCA 72 bp CAGATTCTGCCAATGCAATTGTTGTCCACAGATTCCTaGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTC +
Preference number: 3 (lower is better)
Translates to: QILPMQLLSTDS*CFLLCHLLRIL
Trigger: GAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR CAA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGAGGAGCACTGGCTACTaGGAGGATTATTCAGTTACA +
Preference number: 3 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRRSTGY*EDYSVT
Trigger: TGTAACTGAATAATCCTCCAAGTAGCCAGTGCTCCT...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR-3UTR CAA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTGAATGTGTGCGTGGGTaGTTGCAAAGCAAATTTCTT +
Preference number: 3 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISECVRG*LQSKFL
Trigger: AAGAAATTTGCTTTGCAACAACCCACGCACACATTC...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR TCA 72 bp TGGATGGCTTGGTCTGTTCATGATATACTTCAGGGGTaGATGTGTGCGTGGGTTGTTGCAAAGCAAATTTCT +
Preference number: 3 (lower is better)
Translates to: WMAWSVHDILQG*MCAWVVAKQIS
Trigger: AGAAATTTGCTTTGCAACAACCCACGCACACATTCACCCCTGAAGTATATCATGAACAGACCAAGCCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 72 bp ATTCTGCCAATGCAATTGTTGTCCACAGATTCCTGGTaGTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCT +
Preference number: 3 (lower is better)
Translates to: ILPMQLLSTDSW*FLLCHLLRILS
Trigger: AGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR CAA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTTCGTTACTGCAATTCTaGCATCAGCTGTGGTTAGAA +
Preference number: 3 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSSLLQF*HQLWLE
Trigger: TTCTAACCACAGCTGATGCAAGAATTGCAGTAACGA...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR GCA 72 bp GAAGCCGTTGTGGATATTTATAACTTTGGGGCTACCTaGAAACTAAGGACTCTCTACAAACGGTTCAGAATC +
Preference number: 3 (lower is better)
Translates to: EAVVDIYNFGAT*KLRTLYKRFRI
Trigger: GATTCTGAACCGTTTGTAGAGAGTCCTTAGTTTGCAGGTAGCCCCAAAGTTATAAATATCCACAACGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR GCA 72 bp GGGATTTACAACAATAAGAGGAGGTGCAACAATGGCTaGCCATCTCTTTATTTGTACCTCTGTGATCAGAAG +
Preference number: 3 (lower is better)
Translates to: GIYNNKRRCNNG*PSLYLYLCDQK
Trigger: CTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACCTCCTCTTATTGTTGTAAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR GCA 72 bp GTAATCTTAAGGTCTTCTTGGTCTTTTCTGAGCCTGTaGCTTTCCCTGGGCATATGTGGTCACTTTCTAATT +
Preference number: 3 (lower is better)
Translates to: VILRSSWSFLSL*LSLGICGHFLI
Trigger: AATTAGAAAGTGACCACATATGCCCAGGGAAAGGCACAGGCTCAGAAAAGACCAAGAAGACCTTAAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CCA 72 bp ACAGGCCATCATAACCAAGGAAGAATGGGAAGTGATTaGCATGATTGTTGCAGAATGTCAGAGTTGCTAAAC +
Preference number: 3 (lower is better)
Translates to: TGHHNQGRMGSD*HDCCRMSELLN
Trigger: GTTTAGCAACTCTGACATTCTGCAACAATCATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR CAA 90 bp CATCAGACAGATTCTGCCAATGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTTCAGAGTTGCTAAACTaGCTTCTATATGTAGTGGTG +
Preference number: 3 (lower is better)
Translates to: HQTDSANAIVVHRFLVLSSELLN*LLYVVV
Trigger: CACCACTACATATAGAAGCAAGTTTAGCAACTCTGA...AGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR GCA 72 bp TACATGAGACAAATTACATCAGACAGATTCTGCCAATaGAATTGTTGTCCACAGATTCCTGGTGCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: YMRQITSDRFCQ*NCCPQIPGAFS
Trigger: GGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CCA 72 bp GTACTAAGAGCACAATTTACTGTCCAAGCTTTCCCATaGAAGTTTCAAGCCTTTAATGAATCCCAGAGTTCC +
Preference number: 3 (lower is better)
Translates to: VLRAQFTVQAFP*KFQAFNESQSS
Trigger: GGAACTCTGGGATTCATTAAAGGCTTGAAACTTCCATGGGAAAGCTTGGACAGTAAATTGTGCTCTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR GCA 72 bp CCAAAATACATGAGACAAATTACATCAGACAGATTCTaGCAATGCAATTGTTGTCCACAGATTCCTGGTGCT +
Preference number: 3 (lower is better)
Translates to: PKYMRQITSDRF*QCNCCPQIPGA
Trigger: AGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR GCA 72 bp AACCAAGGAAGAATGGGAAGTGATTGGCATGATTGTTaGAGAATGTCAGAGTTGCTAAACTTGCTTCTATAT +
Preference number: 3 (lower is better)
Translates to: NQGRMGSDWHDC*RMSELLNLLLY
Trigger: ATATAGAAGCAAGTTTAGCAACTCTGACATTCTGCAACAATCATGCCAATCACTTCCCATTCTTCCTTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR TCA 72 bp TCCTTAACTACAATCATACACACAGTTTTGAACCTGTaGTCGTCTAAGAATCGTTACTGCAATTCTTGCATC +
Preference number: 3 (lower is better)
Translates to: SLTTIIHTVLNL*SSKNRYCNSCI
Trigger: GATGCAAGAATTGCAGTAACGATTCTTAGACGATCACAGGTTCAAAACTGTGTGTATGATTGTAGTTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR-3UTR CAA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGTGCAGAATGTCAGAGTaGCTAAACTTGCTTCTATAT +
Preference number: 3 (lower is better)
Translates to: SSKIHETNYIRQILPMQLCRMSE*LNLLLY
Trigger: ATATAGAAGCAAGTTTAGCAACTCTGACATTCTGCA...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGGCGGAGCCGGGGGCTaGACTGGACTCGAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYGGAGG*TGLELR
Trigger: CCGGAGCTCGAGTCCAGTCCAGCCCCCGGCTCCGCC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGGAGCGGGGGCGGGATaGGCGGGAGGTGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYGAGAG*AGGARE
Trigger: CTCCCTTGCACCTCCCGCCCATCCCGCCCCCGCTCC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGCAGCGGGGGTGGCGTTaGGGGAGGTGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLQRGWR*GRWRRW
Trigger: CCACCTCCGCCACCTCCCCCAACGCCACCCCCGCTG...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGCCGGGAGGTTCCCTTTaGTCAGTGGGCCGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLPGGSL*SVGRVG
Trigger: CCCCACCCGGCCCACTGACCAAAGGGAACCTCCCGG...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGACCGGCCTTCTGCGGTaGGGCCTGGAAGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLTGLLR*GLEAGG
Trigger: TCCCCCAGCTTCCAGGCCCCACCGCAGAAGGCCGGT...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGGCCCTGCCCTGTCTTaGCACCTGCTACATCCCGCT +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYGPALS*HLLHPA
Trigger: AGCGGGATGTAGCAGGTGGCAAGACAGGGCAGGGCC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAAGGGGCCCTGTGGTTaGCATCGGAGGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLKGPCG*HRRAKP
Trigger: GGGCTTGGCCCTCCGATGCCAACCACAGGGCCCCTT...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACCCATGCCTCTTCTTCTaGAGGAACGGCTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYPCLFF*RNGWEP
Trigger: GGGCTCCCAGCCGTTCCTGCAGAAGAAGAGGCATGG...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGGTCAGTGGGCCGGGTaGGGACACAAGCGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYGQWAG*GHKRSF
Trigger: AAAACTCCGCTTGTGTCCCCACCCGGCCCACTGACC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATTGGCGGAGGTGGAGGTaGTGGCGCACAGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHWRRWR*WRTGDG
Trigger: CCCGTCCCCTGTGCGCCACCACCTCCACCTCCGCCA...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCACAGCGGGGGTGGCGTTaGGGGAGGTGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPQRGWR*GRWRRW
Trigger: CCACCTCCGCCACCTCCCCCAACGCCACCCCCGCTG...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTAGAACTCTCGATCTaGGGGGCACTGCGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYLELSI*GALRSL
Trigger: CAACGACCGCAGTGCCCCGCAGATCGAGAGTTCTAA...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CCACCTTGGCTCCTGCAAGCTGTATGCAAGCTGCTCCAGGAACACGTGCCCAGTTGCGCACCGGCCTTCTaGGGTGGGGCCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PPWLLQAVCKLLQEHVPSCAPAF*GGAWKL
Trigger: CAGCTTCCAGGCCCCACCGCAGAAGGCCGGTGCGCA...ACTGGGCACGTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACAAGGGAGCTAGGTTTTaGCTGACGGGTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYKGARF*LTGGSK
Trigger: CTTGGAGCCACCCGTCAGGCAAAACCTAGCTCCCTT...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATCTGCGCGGCACTGTCTaGGTGTGGGGGACACGCTAC +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHLRGTV*VWGTRY
Trigger: GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAG...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGACAAAAGGGGCCCTGTaGTTGGCATCGGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLTKGAL*LASEGQ
Trigger: TTGGCCCTCCGATGCCAACCACAGGGCCCCTTTTGT...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACCTACTGGGATGGGACTaGGAACTTGGAGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYLLGWD*ELGGNR
Trigger: CCTGTTCCCTCCAAGTTCCCAGTCCCATCCCAGTAG...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATCCAGGGTGGGAGGTGTaGTCGCGCCTCGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHPGWEV*SRLVCL
Trigger: CAAACACACGAGGCGCGAGCACACCTCCCACCCTGG...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCGGGGCGGGAGGCTCCTaGGCATCTTGCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELGAGGS*ASCAGL
Trigger: CAGCCCTGCGCAAGATGCGCAGGAGCCTCCCGCCCC...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGATGTCATCAGAGCTCTaGCCGACTGCTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLMSSEL*PTASAW
Trigger: CCAAGCGGAAGCAGTCGGGCAGAGCTCTGATGACAT...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATTCGTTCCCTGGAGGCTaGGCGGCACTGTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHSFPGG*AALSGC
Trigger: ACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGA...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTCCAGGCTGTGGCCTaGTGGCTCTTGCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWVQAVA*WLLLES
Trigger: GCTTTCAAGCAAGAGCCAGCAGGCCACAGCCTGGAC...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTCTGACATGTTGTTCTaGAACCTGGAACCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYSDMLF*NLEPQD
Trigger: GTCCTGGGGTTCCAGGTTGCAGAACAACATGTCAGA...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGAAGCCGGGGGCTGGACTaGACTCGAGCTCCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRSRGLD*TRAPAD
Trigger: GTCGGCCGGAGCTCGAGTCCAGTCCAGCCCCCGGCT...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATTTCTGCGGTGGGGCCTaGAAGCTGGGGGATTTAGGG +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHFCGGA*KLGDLG
Trigger: CCCTAAATCCCCCAGCTTCCAGGCCCCACCGCAGAA...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACCCCTGTACTGCAAAATaGAAGCGAGACATGGCACCT +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYPCTAK*KRDMAP
Trigger: AGGTGCCATGTCTCGCTTCCATTTTGCAGTACAGGG...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGGGCTCTATCTGTGCTaGCAAATGCCAAGATGCAAT +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYGLYLC*QMPRCN
Trigger: ATTGCATCTTGGCATTTGTCAGCACAGATAGAGCCC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGTTACAGTTTGGGCTTaGTTCATTCCCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYVTVWA*FIPLEK
Trigger: CTTCTCCAGGGGAATGAATCAAGCCCAAACTGTAAC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGCAGCTGAGGCTTCACTaGCTTGTCACTAAGAACCGA +
Preference number: 4 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLQLRLH*LVTKNR
Trigger: TCGGTTCTTAGTGACAAGGCAGTGAAGCCTCAGCTG...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCGGGGCGGGCAAGGCCTaGGCACCGGCCTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFGAGKA*APAFCG
Trigger: ACCGCAGAAGGCCGGTGCGCAGGCCTTGCCCGCCCC...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CCACCTTGGCTCCTGCAAGCTGTATGCAAGCTGCTCCAGGAACACGTGCCCAGTCCATGCCTCTTCTTCTaGAGGAACGGCTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PPWLLQAVCKLLQEHVPSPCLFF*RNGWEP
Trigger: GGGCTCCCAGCCGTTCCTGCAGAAGAAGAGGCATGG...ACTGGGCACGTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGAGCAATTCTTGTGCCTaGACCTCCCAAGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWSNSCA*TSQVAG
Trigger: CCCAGCAACTTGGGAGGTTCAGGCACAAGAATTGCT...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATCGCAGGCGAGTTCCTTaGTGGATATCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHRRRVP*WISANS
Trigger: GCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCG...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGTACATCCCGCTGGCCTaGTGGTCGCAATACAGGAAA +
Preference number: 4 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWYIPLA*WSQYRK
Trigger: TTTCCTGTATTGCGACCAGCAGGCCAGCGGGATGTA...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCAAGCTCTGTGGTAGGTaGTCTCGCAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELKLCGR*SRRGCW
Trigger: CCAGCACCCCCTGCGAGATCACCTACCACAGAGCTT...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAAGGGGCGGGCAAGGCCTaGGCACCGGCCTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: CNCCPQIPGAFSSAIFSEGAGKA*APAFCG
Trigger: ACCGCAGAAGGCCGGTGCGCAGGCCTTGCCCGCCCC...TTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGCTGAACCTCCCAAGTTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWLNLPS*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCAACTTGGGAGGTTCAG...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAAGGCGGAGCCGGGGGCTaGACTGGACTCGAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: CNCCPQIPGAFSSAIFSEGGAGG*TGLELR
Trigger: CCGGAGCTCGAGTCCAGTCCAGCCCCCGGCTCCGCC...TTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCAATCCCGCTGGCCTGCTaGTCGCAATACAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPIPLAC*SQYRKA
Trigger: GGCTTTCCTGTATTGCGACCAGCAGGCCAGCGGGAT...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATGACCGGCTGCCTTTCTaGATGGCTTGGTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHDRLPF*MAWSVH
Trigger: ATGAACAGACCAAGCCATCCAGAAAGGCAGCCGGTC...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTTGGCGGGCTCCGCTTTaGGCCCCGGATACCCACAAG +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSWRAPL*APDTHK
Trigger: CTTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCCA...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAAGGCTCCTGCGCATCTTaGGCAGGGCTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CNCCPQIPGAFSSAIFSEGSCAS*AGLAGS
Trigger: GGAGCCCGCCAGCCCTGCGCAAGATGCGCAGGAGCC...TTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCCTGCCCTTCGCAAGCTaGAGGTGTCTGTGCTTACCG +
Preference number: 4 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELLPFAS*RCLCLP
Trigger: CGGTAAGCACAGACACCTCCAGCTTGCGAAGGGCAG...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTGGAGCGGGGGCGGGATaGGCGGGAGGTGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTGAGAG*AGGARE
Trigger: CTCCCTTGCACCTCCCGCCCATCCCGCCCCCGCTCC...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCGGATACCCACAAGGTaGGAGCAGAGGGAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFRIPTR*EQRERG
Trigger: CCCCCGCTCCCTCTGCTCCCACCTTGTGGGTATCCG...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCTCCCCCACCGGCCCCTaGTCGGCCATGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFSPTGP*SAMPLL
Trigger: AAGAAGAGGCATGGCCGACCAGGGGCCGGTGGGGGA...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CAA 72 bp GAGCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTaGAAATCCCCAGGAGGCCACTTCAGCCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EQGQEEQNGHQP*KSPGGHFSQRE
Trigger: TTCCCTCTGGCTGAAGTGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp CCACCTTGGCTCCTGCAAGCTGTATGCAAGCTGCTCCAGGAACACGTGCCCAGTGATGTCTCCTGCTTATaGATGGTCCCAAGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PPWLLQAVCKLLQEHVPSDVSCL*MVPREW
Trigger: CCACTCTCTTGGGACCATTCATAAGCAGGAGACATC...ACTGGGCACGTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGACTGCGGTCGTTGATCTaGGTGACTTTGCGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRLRSLI*VTLRRR
Trigger: TCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAG...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CATCAGACAGATTCTGCCAATGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTGGGGCGGGAGGCTCCTaGGCATCTTGCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HQTDSANAIVVHRFLVLSGAGGS*ASCAGL
Trigger: CAGCCCTGCGCAAGATGCGCAGGAGCCTCCCGCCCC...AGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTTGGCGGAGGTGGAGGTaGTGGCGCACAGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTWRRWR*WRTGDG
Trigger: CCCGTCCCCTGTGCGCCACCACCTCCACCTCCGCCA...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTTTGCCCACACCCTCCTaGCCGGCTGCCTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSLPTPS*PAAFLD
Trigger: ATCCAGAAAGGCAGCCGGTCAGGAGGGTGTGGGCAA...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTCCGGCCTTTCGGATCTaGCCTTCGCAAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSPAFRI*PSQAGG
Trigger: ACCTCCAGCTTGCGAAGGGCAGATCCGAAAGGCCGG...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAGTCCTGGCAGCGCCATaGGCCTCGGAGGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSVLAAP*ASEVLP
Trigger: AGGCAATACCTCCGAGGCGCATGGCGCTGCCAGGAC...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGTGCGCACCGGCCTTCTaGGGTGGGGCCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRCAPAF*GGAWKL
Trigger: CAGCTTCCAGGCCCCACCGCAGAAGGCCGGTGCGCA...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAAAGAGCTCTGCCCGACTaGTTCCGCTTGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQERALPD*FRLEPG
Trigger: CCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTCT...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATAACTTTGGGGCTACCTaGAAACTAAGGACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHNFGAT*KLRTLY
Trigger: GTAGAGAGTCCTTAGTTTGCAGGTAGCCCCAAAGTT...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCAGCCGGGGGCTGGACTaGACTCGAGCTCCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: KGGYLSARGCTFSSEELISRGLD*TRAPAD
Trigger: GTCGGCCGGAGCTCGAGTCCAGTCCAGCCCCCGGCT...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAAACAGATCTCCCAGGGTaGGAGGTGTGCTCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQETDLPG*EVCSRL
Trigger: GAGGCGCGAGCACACCTCCCACCCTGGGAGATCTGT...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGGAGGCGGGGCTGTCCTaGCAGCGCCATGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGEAGLS*QRHAPR
Trigger: CCGAGGCGCATGGCGCTGCCAGGACAGCCCCGCCTC...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTCCGGGAGGTTCCCTTTaGTCAGTGGGCCGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSPGGSL*SVGRVG
Trigger: CCCCACCCGGCCCACTGACCAAAGGGAACCTCCCGG...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AGGTGTTTCTTCAAGGACTGTCTTATCACAAAAGCAGCTGTCTGGCTTGCCTTCTCCCCCACCGGCCCCTaGTCGGCCATGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RCFFKDCLITKAAVWLAFSPTGP*SAMPLL
Trigger: AAGAAGAGGCATGGCCGACCAGGGGCCGGTGGGGGA...GAAGGCAAGCCAGACAGCTGCTTTTGTGATAAGACAGTCCTTGAAGAAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTGGAGTGGGCACTAGGTaGAGGGACAGGGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGGVGTR*RDRALS
Trigger: AGATAGAGCCCTGTCCCTCCACCTAGTGCCCACTCC...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGTTTCCATATTCAGAGTaGCTGAGCTTGCACACATCT +
Preference number: 4 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWFPYSE*LSLHTS
Trigger: AGATGTGTGCAAGCTCAGCCACTCTGAATATGGAAA...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CCACCTTGGCTCCTGCAAGCTGTATGCAAGCTGCTCCAGGAACACGTGCCCAGTTTGTCCACAGATTCCTaGTGCTTTCTCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PPWLLQAVCKLLQEHVPSLSTDS*CFLLCH
Trigger: ATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAA...ACTGGGCACGTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp CTCAGGTCACTTTCCTTGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTTGGCGGGCTCCGCTTTaGGCCCCGGATACCCACAAG +
Preference number: 4 (lower is better)
Translates to: LRSLSLMFHTVAELPGLTWRAPL*APDTHK
Trigger: CTTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCCA...AGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp TGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAAGGCCCTGCCCTGTCTTaGCACCTGCTACATCCCGCT +
Preference number: 4 (lower is better)
Translates to: CNCCPQIPGAFSSAIFSEGPALS*HLLHPA
Trigger: AGCGGGATGTAGCAGGTGGCAAGACAGGGCAGGGCC...TTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGCTACTTCCTCTGAGCTaGATCATTGATAAGGCATTA +
Preference number: 4 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWLLPLS*IIDKAL
Trigger: TAATGCCTTATCAATGATGCAGCTCAGAGGAAGTAG...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACCAGAGGAGGTGGGGGTaGCGGTGGCACTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNQRRWG*RWHWHV
Trigger: CACATGCCAGTGCCACCGCCACCCCCACCTCCTCTG...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTTTTTGTTGGGAAGCCTaGGAGAGGGCGCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISFCWEA*ERARGS
Trigger: GCTCCCGCGCGCCCTCTCCCAGGCTTCCCAACAAAA...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTAAATCTTCTGGCATaGTTTATATTCATCCGGAGG +
Preference number: 4 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWVNLLA*FIFIRR
Trigger: CCTCCGGATGAATATAAACCATGCCAGAAGATTTAC...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCATTCTGGGGATCTTGCTaGGGTAAATCTTCTGGCATG +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPFWGSC*GKSSGM
Trigger: CATGCCAGAAGATTTACCCCAGCAAGATCCCCAGAA...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCACCGACTGCTTCCGCTTaGAGCCAGGGACCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSPTASA*SQGPGV
Trigger: TACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGG...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCCCGACTGCTTCCGCTTaGAGCCAGGGACCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: GATMAAHLFICTSVIRSSPTASA*SQGPGV
Trigger: TACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGG...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGAGGTCTCAAGGGGAGATaGGATGCCACATTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRGLKGR*DATFLR
Trigger: TCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACC...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCAACAGGAGGAACAAAATaGCCACCAGCCCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPTGGTK*PPALEI
Trigger: GATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGT...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCAACTCGAAGTCATCAATaGTGTGCAGGCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPTRSHQ*CAGFHF
Trigger: GAAATGGAAGCCTGCACATCATTGATGACTTCGAGT...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTCTGCAGGACACCACCTaGGTCGTTACTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSLQDTT*VVTPDN
Trigger: GTTGTCTGGAGTAACGACTCAGGTGGTGTCCTGCAG...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CTCAGGTCACTTTCCTTGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTCCCTGTCTTGCCACCTaGTACATCCCGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LRSLSLMFHTVAELPGLTPCLAT*YIPLAC
Trigger: GCAGGCCAGCGGGATGTAGCAGGTGGCAAGACAGGG...AGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTGCGCCTCGGAGGTATTaGCTAGCCTGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSAPRRY*LAWERQ
Trigger: CTGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGC...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTGTCCTGGCAGCGCCATaGGCCTCGGAGGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTVLAAP*ASEVLP
Trigger: AGGCAATACCTCCGAGGCGCATGGCGCTGCCAGGAC...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CTCAGGTCACTTTCCTTGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTAGAGCTCTGCCCGACTaGTTCCGCTTGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRSLSLMFHTVAELPGLTRALPD*FRLEPG
Trigger: CCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTCT...AGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCCAAGGGGAGATGGGATaGCACATTCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELQGEMG*HIPEIS
Trigger: AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTG...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAAGCCCAAGGGACTCAGTaGACCAGCATGAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQEAQGTQ*TSMSSK
Trigger: CTTCGAGCTCATGCTGGTGCACTGAGTCCCTTGGGC...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCATGGTGCTTTCTCCTCTaGCATCTTCTCAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPWCFLL*HLLRIL
Trigger: GAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCA...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTACAGATCTCCCAGGGTaGGAGGTGTGCTCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTTDLPG*EVCSRL
Trigger: GAGGCGCGAGCACACCTCCCACCCTGGGAGATCTGT...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TCAGTTTTTCTCACAGGCCATCATAACCAAGGAAGAATGGGAAGTGATTGGCATCGGATACCCACAAGGTaGGAGCAGAGGGAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SVFLTGHHNQGRMGSDWHRIPTR*EQRERG
Trigger: CCCCCGCTCCCTCTGCTCCCACCTTGTGGGTATCCG...ATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCCTGTGAGAAAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATAAGTCTTCCACAGAATaGAACGTGAATTTAGACTCG +
Preference number: 4 (lower is better)
Translates to: CAALSGCGGHATSSELHHKSSTE*NVNLDS
Trigger: CGAGTCTAAATTCACGTTCCATTCTGTGGAAGACTT...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTGGCACTGTCTGGGTGTaGGGGACACGCTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISGTVWV*GTRYFL
Trigger: GAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCC...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCAATGGAAGCGAGACATaGCACCTCGTTCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFNGSET*HLVPWR
Trigger: CCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTGATGTCTCCTGCTTATaGATGGTCCCAAGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGDVSCL*MVPREW
Trigger: CCACTCTCTTGGGACCATTCATAAGCAGGAGACATC...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTAAGCTCTGTGGTAGGTaGTCTCGCAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTKLCGR*SRRGCW
Trigger: CCAGCACCCCCTGCGAGATCACCTACCACAGAGCTT...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTGGGGTGGGTGGGGTCTaGCATGTTGTTCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISGVGGV*HVVLQP
Trigger: AGGTTGCAGAACAACATGTCAGACCCCACCCACCCC...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTGTCAGTGAGAATATGTaGCAATGGCGGGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGVSENM*QWRGLC
Trigger: ACACAGTCCCCGCCATTGTCACATATTCTCACTGAC...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCATTACATTCAGAGACATaGGGCTTGTGTTACCTGAGA +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPLHSET*GLCYLR
Trigger: TCTCAGGTAACACAAGCCTCATGTCTCTGAATGTAA...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACCCGGCCTTTCGGATCTaGCCTTCGCAAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNPAFRI*PSQAGG
Trigger: ACCTCCAGCTTGCGAAGGGCAGATCCGAAAGGCCGG...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp TGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAAGCCCACCTTGGCTCCTaGAAGCTGTATGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: CNCCPQIPGAFSSAIFSEAHLGS*KLYASC
Trigger: GCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGGGC...TTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCTTTTGTTGGGAAGCCTaGGAGAGGGCGCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGGYLSARGCTFSSEELIFCWEA*ERARGS
Trigger: GCTCCCGCGCGCCCTCTCCCAGGCTTCCCAACAAAA...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGGAGGCGGGGCTGTCCTaGCAGCGCCATGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SSKIHETNYIRQILPMQLEAGLS*QRHAPR
Trigger: CCGAGGCGCATGGCGCTGCCAGGACAGCCCCGCCTC...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TTGCTAAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCGTTCCCTTTGGTCAGTaGGCCGGGTGGGGACACAAG +
Preference number: 4 (lower is better)
Translates to: LLNLLLYVVVIPGKPPFVVPFGQ*AGWGHK
Trigger: CTTGTGTCCCCACCCGGCCCACTGACCAAAGGGAAC...GACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTTAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGAGGCTGCCTTTCTGGATaGCTTGGTCTGTTCATGATA +
Preference number: 4 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRGCLSG*LGLFMI
Trigger: TATCATGAACAGACCAAGCCATCCAGAAAGGCAGCC...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCAATCTTAAGGTCTTCTTaGTCTTTTCTGAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPILRSS*SFLSLC
Trigger: GCACAGGCTCAGAAAAGACCAAGAAGACCTTAAGAT...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CAA 72 bp GGAACTTGGAGGGAACAGGATGAAAGTGACAGAGACTaGGGCACGAGGGACACTGTAAACAGTAGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GTWREQDESDRD*GTRDTVNSRST
Trigger: AGTGCTCCTACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCTCCAAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAACACAAGCGGAGTTTTaGTGGGGGAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSTQAEF*WGRKRE
Trigger: TTCCCTCTTCCTCCCCCATCAAAACTCCGCTTGTGT...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAAAGGGCAGCTATTTTaGGCACAGCCCAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSKGQLF*AQPRDQ
Trigger: CTGATCCCTGGGCTGTGCTCAAAATAGCTGCCCTTT...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCTACATCCCGCTGGCCTaGTGGTCGCAATACAGGAAA +
Preference number: 4 (lower is better)
Translates to: GATMAAHLFICTSVIRSSYIPLA*WSQYRK
Trigger: TTTCCTGTATTGCGACCAGCAGGCCAGCGGGATGTA...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGCCCTGTCTTGCCACCTaGTACATCCCGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGPCLAT*YIPLAC
Trigger: GCAGGCCAGCGGGATGTAGCAGGTGGCAAGACAGGG...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGGCGCCTCGGAGGTATTaGCTAGCCTGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGAPRRY*LAWERQ
Trigger: CTGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGC...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGGCTCCTGCGCATCTTaGGCAGGGCTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWGSCAS*AGLAGS
Trigger: GGAGCCCGCCAGCCCTGCGCAAGATGCGCAGGAGCC...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTTCAGGGGTGAATGTGTaGGTGGGTTGTTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSSGVNV*VGCCKA
Trigger: TGCTTTGCAACAACCCACGCACACATTCACCCCTGA...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTCTGCCCTTCGCAAGCTaGAGGTGTCTGTGCTTACCG +
Preference number: 4 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSLPFAS*RCLCLP
Trigger: CGGTAAGCACAGACACCTCCAGCTTGCGAAGGGCAG...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGATCCCGCTGGCCTGCTaGTCGCAATACAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRIPLAC*SQYRKA
Trigger: GGCTTTCCTGTATTGCGACCAGCAGGCCAGCGGGAT...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTCCTGCTACATCCCGCTaGCCTGCTGGTCGCAATACA +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTPATSR*PAGRNT
Trigger: TGTATTGCGACCAGCAGGCCAGCGGGATGTAGCAGG...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TCAGTTTTTCTCACAGGCCATCATAACCAAGGAAGAATGGGAAGTGATTGGCATTTCTGCGGTGGGGCCTaGAAGCTGGGGGATTTAGGG +
Preference number: 4 (lower is better)
Translates to: SVFLTGHHNQGRMGSDWHFCGGA*KLGDLG
Trigger: CCCTAAATCCCCCAGCTTCCAGGCCCCACCGCAGAA...ATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCCTGTGAGAAAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCCAGGTGTACGGCTTCTaGGGATCTTGCTGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GATMAAHLFICTSVIRSSQVYGF*GSCWGK
Trigger: TTTACCCCAGCAAGATCCCCAGAAGCCGTACACCTG...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTGATATACTTCAGGGGTaGATGTGTGCGTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSDILQG*MCAWVV
Trigger: AACAACCCACGCACACATTCACCCCTGAAGTATATC...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAGGGATGCCACATTCCTaGGATTTCTCCCTAATTGCC +
Preference number: 4 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSGMPHS*DFSLIA
Trigger: GGCAATTAGGGAGAAATCTCAGGAATGTGGCATCCC...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTCTCAGTGCACCAGCATaGGCTCGAAGGGTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISLSAPA*ARRVVN
Trigger: ATTCACAACCCTTCGAGCTCATGCTGGTGCACTGAG...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATCGCAGGCGAGTTCCTTaGTGGATATCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNRRRVP*WISANS
Trigger: GCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCG...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATATGTCATCAGAGCTCTaGCCGACTGCTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNMSSEL*PTASAW
Trigger: CCAAGCGGAAGCAGTCGGGCAGAGCTCTGATGACAT...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGGTTCCCTTTGGTCAGTaGGCCGGGTGGGGACACAAG +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGVPFGQ*AGWGHK
Trigger: CTTGTGTCCCCACCCGGCCCACTGACCAAAGGGAAC...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCAGTTTTTCTCACAGGCCATCATAACCAAGGAAGAATGGGAAGTGATTGGCATGCTGCTATTAACTCCTaGCAAAGGGGGCGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: SVFLTGHHNQGRMGSDWHAAINS*QRGRGQ
Trigger: TTGCCCGCGCCCCCTTTGCCAGGAGTTAATAGCAGC...ATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCCTGTGAGAAAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGACCGGCCTTCTGCGGTaGGGCCTGGAAGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SSKIHETNYIRQILPMQLTGLLR*GLEAGG
Trigger: TCCCCCAGCTTCCAGGCCCCACCGCAGAAGGCCGGT...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTCAGGCTGTGGCCTGCTaGCTCTTGCTTGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTQAVAC*LLLESS
Trigger: AGAGCTTTCAAGCAAGAGCCAGCAGGCCACAGCCTG...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGAGCTTGAGCATGGGGTaGGTGGGGTCTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRSLSMG*VGSDML
Trigger: CAACATGTCAGACCCCACCCACCCCATGCTCAAGCT...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTATGAGCCACTGCTCCTaGCCCGCTCTGTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISMSHCS*PALSLN
Trigger: ATTTAAGGACAGAGCGGGCCAGGAGCAGTGGCTCAT...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAACACGCTACTTCCTCTaGGCTGCATCATTGATAAGG +
Preference number: 4 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSTRYFL*AASLIR
Trigger: CCTTATCAATGATGCAGCTCAGAGGAAGTAGCGTGT...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AGAAGAGGGAGTGAAGAGCAGGACCAGCCCGGCCTGACCTTTTCCATATTCAGACTTGCCTTTACTTTGTaGTGTATTACATTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRGSEEQDQPGLTFSIFRLAFTL*CITLGS
Trigger: GCTGCCTAATGTAATACATCACAAAGTAAAGGCAAG...TCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCTGCTCTTCACTCCCTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTAGAAGGGGAGACCTCTaGGATACAACTGGTAGTTTA +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSRRGDL*DTTGSL
Trigger: TAAACTACCAGTTGTATCTCAGAGGTCTCCCCTTCT...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGCTAAGATGGGGGCAGTaGGGCACTAGGTATTTGTGG +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRLRWGQ*GTRYLW
Trigger: CCACAAATACCTAGTGCCTCACTGCCCCCATCTTAG...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCGGCTTGGTCTGTTCATaGTATACTTCAGGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFGLVCS*YTSGVN
Trigger: ATTCACCCCTGAAGTATATCATGAACAGACCAAGCC...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTTGCTTCCATCTGGAATaGGAAAGCACAGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISCFHLE*ESTALL
Trigger: CAGCAGTGCTGTGCTTTCTCATTCCAGATGGAAGCA...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTCGCGCCTCGTGTGTTTaGAGAACCTCCTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTRASCV*RTSSFF
Trigger: AAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCG...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGGGCTTCTGGGGATCTTaGTGGGGTAAATCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRGFWGS*WGKSSG
Trigger: GCCAGAAGATTTACCCCAGCAAGATCCCCAGAAGCC...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CATCAGACAGATTCTGCCAATGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTGGCTTCTGGGGATCTTaGTGGGGTAAATCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HQTDSANAIVVHRFLVLSGFWGS*WGKSSG
Trigger: GCCAGAAGATTTACCCCAGCAAGATCCCCAGAAGCC...AGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CGAAGGGTTGTGAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCTTCAAGCAATTCTTGTaGCTGAACCTCCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RRVVNSVIGLKGRWDATFFKQFL*LNLPSC
Trigger: GCAACTTGGGAGGTTCAGGCACAAGAATTGCTTGAA...GAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTCACAACCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCCCCTTACCATTTCTGTaGCTCCTGAGGAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: GATMAAHLFICTSVIRSSPLPFL*LLRRIP
Trigger: AGGAATTCTCCTCAGGAGGCACAGAAATGGTAAGGG...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGCAGAGGAGGTGGGGGTaGCGGTGGCACTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWQRRWG*RWHWHV
Trigger: CACATGCCAGTGCCACCGCCACCCCCACCTCCTCTG...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CTGTGCCTTTCCCTGGGCATATGTGGTCACTTTCTAATTTTCATCATATATGTAGGTCAGTGGGCCGGGTaGGGACACAAGCGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LCLSLGICGHFLIFIIYVGQWAG*GHKRSF
Trigger: AAAACTCCGCTTGTGTCCCCACCCGGCCCACTGACC...TACATATATGATGAAAATTAGAAAGTGACCACATATGCCCAGGGAAAGGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGGCTGCTATTAACTCCTaGCAAAGGGGGCGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGAAINS*QRGRGQ
Trigger: TTGCCCGCGCCCCCTTTGCCAGGAGTTAATAGCAGC...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAATTCTGGGGATCTTGCTaGGGTAAATCTTCTGGCATG +
Preference number: 4 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQEFWGSC*GKSSGM
Trigger: CATGCCAGAAGATTTACCCCAGCAAGATCCCCAGAA...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTGGAGCACTGGCTACTTaGAGGATTATTCAGTTACAA +
Preference number: 4 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGGALAT*RIIQLQ
Trigger: TTGTAACTGAATAATCCTCCAAGTAGCCAGTGCTCC...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTGCCTGTGCCTTTCCCTaGGCATATGTGGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSACAFP*AYVVTF
Trigger: GAAAGTGACCACATATGCCCAGGGAAAGGCACAGGC...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTTATTTTACACAACTGTaGGGGCAGTGGAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISYFTQL*GQWSGH
Trigger: GTGTCCACTCCACTGCCCTCACAGTTGTGTAAAATA...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGCCAGGGTGGGAGGTGTaGTCGCGCCTCGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSKIHETNYIRQILPMQLPGWEV*SRLVCL
Trigger: CAAACACACGAGGCGCGAGCACACCTCCCACCCTGG...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CTCAGGTCACTTTCCTTGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTCAGCTGAGGCTTCACTaGCTTGTCACTAAGAACCGA +
Preference number: 4 (lower is better)
Translates to: LRSLSLMFHTVAELPGLTQLRLH*LVTKNR
Trigger: TCGGTTCTTAGTGACAAGGCAGTGAAGCCTCAGCTG...AGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGCACCTCAGCCTCCCATaGTGGGATTACCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGHLSLP*WDYLHE
Trigger: CTCATGCAGGTAATCCCAGCATGGGAGGCTGAGGTG...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCCTCCTGCAAGCTGTATaGAAGCTGCTCCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: KGGYLSARGCTFSSEELILLQAV*KLLQEH
Trigger: GTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAG...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCAGGCGAGTTCCTTGCTaGATATCAGCCAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: KGGYLSARGCTFSSEELIRRVPC*ISANSA
Trigger: TGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCT...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTTTTTTGTGCCCACCTTaGCTCCTGCAAGCTGTATGC +
Preference number: 4 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSFLCPP*LLQAVC
Trigger: GCATACAGCTTGCAGGAGCCAAGGTGGGCACAAAAA...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp TTGCTAAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCGAGAATTTCTGCCTTTaGTGTCATCAGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LLNLLLYVVVIPGKPPFVENFCL*CHQSSA
Trigger: GGCAGAGCTCTGATGACATCAAAGGCAGAAATTCTC...GACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTTAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGCATATTCAGAGTGGCTaGGCTTGCACACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGHIQSG*ACTHLP
Trigger: GGGGAGATGTGTGCAAGCTCAGCCACTCTGAATATG...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGTACTCCAGACAACAGTaGGGCAGATGCAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRYSRQQ*GRCSHV
Trigger: AACATGACTGCATCTGCCTCACTGTTGTCTGGAGTA...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AGGTGTTTCTTCAAGGACTGTCTTATCACAAAAGCAGCTGTCTGGCTTGCCTTCGAGGCTTGTGTTACCTaGGAATTTCTGCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: RCFFKDCLITKAAVWLAFEACVT*EFLPLM
Trigger: CATCAAAGGCAGAAATTCTCAGGTAACACAAGCCTC...GAAGGCAAGCCAGACAGCTGCTTTTGTGATAAGACAGTCCTTGAAGAAACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CTGTGCCTTTCCCTGGGCATATGTGGTCACTTTCTAATTTTCATCATATATGTATTAGAACTCTCGATCTaGGGGGCACTGCGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LCLSLGICGHFLIFIIYVLELSI*GALRSL
Trigger: CAACGACCGCAGTGCCCCGCAGATCGAGAGTTCTAA...TACATATATGATGAAAATTAGAAAGTGACCACATATGCCCAGGGAAAGGCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTAATTCCAAGCCTGTATaGCAACTGAATTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: REQDESDRDLGTRDTVNSNSKPV*QLNYSL
Trigger: CAAGCTGTAATTCAGTTGGCATACAGGCTTGGAATT...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACTCCACAGATTCCTGGTaGTTTCTCCTCTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNSTDSW*FLLCHL
Trigger: AAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGA...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CTCAGGTCACTTTCCTTGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTTCTTTTCTGAGCCTGTaGCTTTCCCTGGGCATATGT +
Preference number: 4 (lower is better)
Translates to: LRSLSLMFHTVAELPGLTSFLSL*LSLGIC
Trigger: ACATATGCCCAGGGAAAGGCACAGGCTCAGAAAAGA...AGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGAGGCGAGTTCCTTGCTaGATATCAGCCAACAGCGCA +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGRRVPC*ISANSA
Trigger: TGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCT...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTATACACGTGAAACATTaGAGGAGTCACAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISIHVKH*RSHRLQ
Trigger: CTGCAGTCTGTGACTCCTCCAATGTTTCACGTGTAT...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACCATGTGTCACGGTGTTaGTGTCTCCTGCTTATGAAT +
Preference number: 4 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNHVSRC*CLLLMN
Trigger: ATTCATAAGCAGGAGACATCAACACCGTGACACATG...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGAGCTAGGTTTTGCCTaGCGGGTGGCTCCAAGGATC +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWELGFA*RVAPRI
Trigger: GATCCTTGGAGCCACCCGTCAGGCAAAACCTAGCTC...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTCATTTCTGTGCCTCCTaGGGAGAATTCCTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTHFCAS*GEFLVL
Trigger: TAAAACCAGGAATTCTCCTCAGGAGGCACAGAAATG...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CAGAAATGGGGAGATTATTGTTCGACTGAATACATGTTTTCAAAGAAACAAAGGGTCCAGGCTGTGGCCTaGTGGCTCTTGCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: QKWGDYCSTEYMFSKKQRVQAVA*WLLLES
Trigger: GCTTTCAAGCAAGAGCCAGCAGGCCACAGCCTGGAC...CCTTTGTTTCTTTGAAAACATGTATTCAGTCGAACAATAATCTCCCCATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCGATTGGCATGATTGTTaGAGAATGTCAGAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GATMAAHLFICTSVIRSSDWHDC*RMSELL
Trigger: TAGCAACTCTGACATTCTGCAACAATCATGCCAATC...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACAACAATAAGAGGAGGTaGAACAATGGCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNNNKRR*NNGCPS
Trigger: AGATGGGCAGCCATTGTTGCACCTCCTCTTATTGTT...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGCCTGCTACATCCCGCTaGCCTGCTGGTCGCAATACA +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWPATSR*PAGRNT
Trigger: TGTATTGCGACCAGCAGGCCAGCGGGATGTAGCAGG...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGCTTGATTCATTCCCCTaGAGAAGGGAATTTGACCCT +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRLDSFP*RREFDP
Trigger: AGGGTCAAATTCCCTTCTCCAGGGGAATGAATCAAG...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATGAGGAGGTGCAACAATaGCTGCCCATCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNEEVQQ*LPISLF
Trigger: AAATAAAGAGATGGGCAGCCATTGTTGCACCTCCTC...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CAA 72 bp GAGACAAATTACATCAGACAGATTCTGCCAATGCAATaGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ETNYIRQILPMQ*LSTDSWCFLLC
Trigger: GCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGAGGACCAGCCCGGCCTaGCCTTTTCCATATTCAGAG +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWRTSPA*PFPYSE
Trigger: CTCTGAATATGGAAAAGGTCAGGCCGGGCTGGTCCT...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAAAAATTCCCTGTACTaGAAAATGGAAGCGAGACAT +
Preference number: 4 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSKNSLY*KMEARH
Trigger: ATGTCTCGCTTCCATTTTGCAGTACAGGGAATTTTT...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGAGAAAGCACAGCACTaGTGCAGGACACCACCTGAG +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWEKAQH*CRTPPE
Trigger: CTCAGGTGGTGTCCTGCAGCAGTGCTGTGCTTTCTC...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCTCTAAGAATCGTTACTaGAATTCTTGCATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GATMAAHLFICTSVIRSSSKNRY*NSCISC
Trigger: ACAGCTGATGCAAGAATTGCAGTAACGATTCTTAGA...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CATCAGACAGATTCTGCCAATGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTAGGTGCAACAATGGCTaGCCATCTCTTTATTTGTAC +
Preference number: 4 (lower is better)
Translates to: HQTDSANAIVVHRFLVLSRCNNG*PSLYLY
Trigger: GTACAAATAAAGAGATGGGCAGCCATTGTTGCACCT...AGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGTCTCCTGCTTATGAATaGTCCCAAGAGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LICREEIPKSHKAGYWDGSPAYE*SQESGF
Trigger: GAAGCCACTCTCTTGGGACCATTCATAAGCAGGAGA...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGCAGGCTGTGGCCTGCTaGCTCTTGCTTGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWQAVAC*LLLESS
Trigger: AGAGCTTTCAAGCAAGAGCCAGCAGGCCACAGCCTG...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AGGTGTTTCTTCAAGGACTGTCTTATCACAAAAGCAGCTGTCTGGCTTGCCTTCAAGTCTTCCACAGAATaGAACGTGAATTTAGACTCG +
Preference number: 4 (lower is better)
Translates to: RCFFKDCLITKAAVWLAFKSSTE*NVNLDS
Trigger: CGAGTCTAAATTCACGTTCCATTCTGTGGAAGACTT...GAAGGCAAGCCAGACAGCTGCTTTTGTGATAAGACAGTCCTTGAAGAAACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCCGGTTCAAGATGCCCTaGGTGAGATTAAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KGGYLSARGCTFSSEELIRFKMP*VRLKVF
Trigger: AAACACCTTTAATCTCACCCAGGGCATCTTGAACCG...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
3UTR CAA 72 bp TTCATGATATACTTCAGGGGTGAATGTGTGCGTGGGTaGTTGCAAAGCAAATTTCTTTTTCGCTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FMIYFRGECVRG*LQSKFLFRWFP
Trigger: GGGAAACCAGCGAAAAAGAAATTTGCTTTGCAACAACCCACGCACACATTCACCCCTGAAGTATATCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
3UTR CAA 72 bp ACAAATTACATCAGACAGATTCTGCCAATGCAATTGTaGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TNYIRQILPMQL*STDSWCFLLCH
Trigger: ATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATGTAATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGCCCACCACAAGGGAATaGATGTGGAGTTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWPTTRE*MWSCQA
Trigger: TGCCTGACAACTCCACATTCATTCCCTTGTGGTGGG...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTACAGTTTTGAACCTGTaGTCGTCTAAGAATCGTTAC +
Preference number: 4 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSTVLNL*SSKNRY
Trigger: GTAACGATTCTTAGACGATCACAGGTTCAAAACTGT...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp CTCAGGTCACTTTCCTTGATGTTCCACACAGTTGCAGAATTGCCTGGTTTAACTTCATACACACAGTTTTaGACCTGTGATCGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LRSLSLMFHTVAELPGLTSYTQF*TCDRLR
Trigger: TCTTAGACGATCACAGGTTCAAAACTGTGTGTATGA...AGTTAAACCAGGCAATTCTGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACTTATTTGTACCTCTGTaGTCAGAAGCAGCAATAACC +
Preference number: 4 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNLFVPL*SEAAIT
Trigger: GGTTATTGCTGCTTCTGATCACAGAGGTACAAATAA...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGCGCGCCTCGTGTGTTTaGAGAACCTCCTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWRASCV*RTSSFF
Trigger: AAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCG...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCGATGTTCCACACAGTTaGAGAATTGCCTGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: KGGYLSARGCTFSSEELIDVPHS*RIAWFN
Trigger: GTTAAACCAGGCAATTCTGCAACTGTGTGGAACATC...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp TGTACCTCTGTGATCAGAAGCAGCAATAACCAATCAGAGAACAGATTCCCCAGTGACAGATTCTGCCAATaGAATTGTTGTCCACAGATT +
Preference number: 4 (lower is better)
Translates to: CTSVIRSSNNQSENRFPSDRFCQ*NCCPQI
Trigger: AATCTGTGGACAACAATTGCATTGGCAGAATCTGTC...ACTGGGGAATCTGTTCTCTGATTGGTTATTGCTGCTTCTGATCACAGAGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGCAGGTGTACGGCTTCTaGGGATCTTGCTGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWQVYGF*GSCWGK
Trigger: TTTACCCCAGCAAGATCCCCAGAAGCCGTACACCTG...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGTGTTGTTCTGCAACCTaGAACCCCAGGACCTTCGCT +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWCCSAT*NPRTFA
Trigger: AGCGAAGGTCCTGGGGTTCCAGGTTGCAGAACAACA...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAAAATAAGAAGCCGTTGTaGATATTTATAACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQENKKPL*IFITLG
Trigger: CCCCAAAGTTATAAATATCCACAACGGCTTCTTATT...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTAGAATGGGAAGTGATTaGCATGATTGTTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: KLASICSGDSREAPFCHTRMGSD*HDCCRM
Trigger: CATTCTGCAACAATCATGCCAATCACTTCCCATTCT...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGCAGGCAGTCTACTCTaGAGGTGGAATTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWAGSLL*RWNCLC
Trigger: ACAAAGGCAATTCCACCTTCAGAGTAGACTGCCTGC...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp TCAGTTTTTCTCACAGGCCATCATAACCAAGGAAGAATGGGAAGTGATTGGCATTGTTTCATTCTGGCTTaGAAAAAGGTCCACCAAATG +
Preference number: 4 (lower is better)
Translates to: SVFLTGHHNQGRMGSDWHCFILA*KKVHQM
Trigger: CATTTGGTGGACCTTTTTTCAAGCCAGAATGAAACA...ATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCCTGTGAGAAAAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCGTGGGTACTAGTACTTaGATTGTGACTAAATTTGGC +
Preference number: 4 (lower is better)
Translates to: KGGYLSARGCTFSSEELIVGTST*IVTKFG
Trigger: GCCAAATTTAGTCACAATTCAAGTACTAGTACCCAC...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR GCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGATCTGTGCTGACAAATaGCAAGATGCAATGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRICADK*QDAMQK
Trigger: TTTTTGCATTGCATCTTGGCATTTGTCAGCACAGAT...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR GCA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGCCAGAGCTGATGACCTaGAAAAACTTCTACTTATTT +
Preference number: 4 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRPELMT*KNFYLF
Trigger: AAATAAGTAGAAGTTTTTGCAGGTCATCAGCTCTGG...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CATCAGACAGATTCTGCCAATGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTATAACCAAGGAAGAATaGGAAGTGATTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: HQTDSANAIVVHRFLVLSITKEE*EVIGMI
Trigger: AATCATGCCAATCACTTCCCATTCTTCCTTGGTTAT...AGAAAGCACCAGGAATCTGTGGACAACAATTGCATTGGCAGAATCTGTCTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGAGAATTTCTGCCTTTaGTGTCATCAGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWENFCL*CHQSSA
Trigger: GGCAGAGCTCTGATGACATCAAAGGCAGAAATTCTC...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATCATAGTATTCAGAAATaGGGAGATTATTGTTCGACT +
Preference number: 4 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNHSIQK*GDYCST
Trigger: AGTCGAACAATAATCTCCCCATTTCTGAATACTATG...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR TCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGCATGTGTCACGGTGTTaGTGTCTCCTGCTTATGAAT +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWHVSRC*CLLLMN
Trigger: ATTCATAAGCAGGAGACATCAACACCGTGACACATG...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGACTCGAAGTCATCAATaGTGTGCAGGCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWTRSHQ*CAGFHF
Trigger: GAAATGGAAGCCTGCACATCATTGATGACTTCGAGT...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CCA 90 bp CTGTGCCTTTCCCTGGGCATATGTGGTCACTTTCTAATTTTCATCATATATGTAGTAAATCTTCTGGCATaGTTTATATTCATCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LCLSLGICGHFLIFIIYVVNLLA*FIFIRR
Trigger: CCTCCGGATGAATATAAACCATGCCAGAAGATTTAC...TACATATATGATGAAAATTAGAAAGTGACCACATATGCCCAGGGAAAGGCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGGCACTAGGTATTTGTaGCAGGTATTTCACACGATG +
Preference number: 4 (lower is better)
Translates to: MFLICREEIPKSHKAGYWGTRYL*QVFHTM
Trigger: CATCGTGTGAAATACCTGCCACAAATACCTAGTGCC...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR TCA 90 bp CAGAAATGGGGAGATTATTGTTCGACTGAATACATGTTTTCAAAGAAACAAAGGATGTACTTTTTCCTCTaGGGAACTCATCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: QKWGDYCSTEYMFSKKQRMYFFL*GTHPSF
Trigger: GAAGCTAGGATGAGTTCCTCAGAGGAAAAAGTACAT...CCTTTGTTTCTTTGAAAACATGTATTCAGTCGAACAATAATCTCCCCATTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CCA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGTTCTTGCATCAGCTGTaGTTAGAAAAGGGGGATACT +
Preference number: 4 (lower is better)
Translates to: SSKIHETNYIRQILPMQLFLHQL*LEKGDT
Trigger: AGTATCCCCCTTTTCTAACCACAGCTGATGCAAGAA...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS GCA 90 bp CGTCCCGCAGCGCCCGTGCTCCAAGCGGCGCCGCTACCGCCGAGCTaGGCTCGGTGCGCCCGGCTCGCTCCCCGGCCACCGGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: RPAAPVLQAAPLPPS*ARCARLAPRPPALV
Trigger: CACCAGAGCCGGTGGCCGGGGAGCGAGCCGGGCGCACCGAGCGCAGCTCGGCGGTAGCGGCGCCGCTTGGAGCACGGGCGCTGCGGGACG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGGGGCCCTGCCCTGTCTaGCCACCTGCTACATCCCGC +
Preference number: 5 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLGPCPV*PPATSR
Trigger: GCGGGATGTAGCAGGTGGCAAGACAGGGCAGGGCCC...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACCCCGACTGCTTCCGCTaGGAGCCAGGGACCAGGTGT +
Preference number: 5 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYPDCFR*EPGTRC
Trigger: ACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGG...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS CCA 90 bp CAGCCAACAGCGCACTCCGGCCTTTCGGATCTGCCCTTCGCAAGCTaGAGGTGTCTGTGCTTACCGGGGGTGCTGATGGTGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: QPTAHSGLSDLPFAS*RCLCLPGVLMVGEG
Trigger: CCCCTCCCCCACCATCAGCACCCCCGGTAAGCACAGACACCTCCAGCTTGCGAAGGGCAGATCCGAAAGGCCGGAGTGCGCTGTTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS-3UTR CAA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCAAGGCTCCTGCGCATCTaGCGCAGGGCTGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPRLLRI*RRAGGL
Trigger: GAGCCCGCCAGCCCTGCGCAAGATGCGCAGGAGCCT...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGGACACAAGCGGAGTTTaGATGGGGGAGGAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLDTSGV*MGEEEG
Trigger: TCCCTCTTCCTCCCCCATCAAAACTCCGCTTGTGTC...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGAAAGTGACAGAGACTaGGGCACGAGGGACACTGTA +
Preference number: 5 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYESDRD*GTRDTV
Trigger: TACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATCCGCTGATGGTTTTGTaGGGAAGCCTGGGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: CAALSGCGGHATSSELHHPLMVL*GSLGEG
Trigger: GCCCTCTCCCAGGCTTCCCAACAAAACCATCAGCGG...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS GCA 90 bp GCACTGCGGTCGTTGATCTGCGTGACTTTGCGCAGGCGAGTTCCTTaGTGGATATCAGCCAACAGCGCACTCCGGCCTTTCGGATCTGCC +
Preference number: 5 (lower is better)
Translates to: ALRSLICVTLRRRVP*WISANSALRPFGSA
Trigger: GGCAGATCCGAAAGGCCGGAGTGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS-3UTR CAA 90 bp CACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACGCATGTGTCACGGTGTaGATGTCTCCTGCTTATGAA +
Preference number: 5 (lower is better)
Translates to: HLVPWRLRGTVWVWGTRYACVTV*MSPAYE
Trigger: TTCATAAGCAGGAGACATCAACACCGTGACACATGC...GTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCAGGGGCACTGCGGTCGTaGATCTGCGTGACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPGALRS*ICVTLR
Trigger: GCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCC...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGGGGCCAAGCCCACTCTaGCCTTTACTTTGTGATGTA +
Preference number: 5 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLGPSPL*PLLCDV
Trigger: TACATCACAAAGTAAAGGCAAGAGTGGGCTTGGCCC...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS TCA 90 bp GGCGGTGGCACTGGCATGTGTCACGGTGTTGATGTCTCCTGCTTATaGATGGTCCCAAGAGAGTGGCTTCTGCTCTGCAGGTGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: GGGTGMCHGVDVSCL*MVPREWLLLCRWRS
Trigger: GCTCCGCCACCTGCAGAGCAGAAGCCACTCTCTTGGGACCATTCATAAGCAGGAGACATCAACACCGTGACACATGCCAGTGCCACCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CCA 90 bp GTGGCACTGGCATGTGTCACGGTGTTGATGTCTCCTGCTTATGAATaGTCCCAAGAGAGTGGCTTCTGCTCTGCAGGTGGCGGAGCCGGG +
Preference number: 5 (lower is better)
Translates to: VALACVTVLMSPAYE*SQESGFCSAGGGAG
Trigger: CCCGGCTCCGCCACCTGCAGAGCAGAAGCCACTCTCTTGGGACCATTCATAAGCAGGAGACATCAACACCGTGACACATGCCAGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CCA 90 bp CTGCGGTCGTTGATCTGCGTGACTTTGCGCAGGCGAGTTCCTTGCTaGATATCAGCCAACAGCGCACTCCGGCCTTTCGGATCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: LRSLICVTLRRRVPC*ISANSALRPFGSAL
Trigger: AAGGGCAGATCCGAAAGGCCGGAGTGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS-3UTR CAA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCGGGGCACTGCGGTCGTaGATCTGCGTGACTTTGCGC +
Preference number: 5 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELGALRS*ICVTLR
Trigger: GCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCC...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATTCAGAGTGGCTGAGCTaGCACACATCTCCCCACAGA +
Preference number: 5 (lower is better)
Translates to: CAALSGCGGHATSSELHHSEWLS*HTSPHR
Trigger: TCTGTGGGGAGATGTGTGCAAGCTCAGCCACTCTGA...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS TCA 90 bp CAGAGGAGGTGGGGGTGGCGGTGGCACTGGCATGTGTCACGGTGTTaGTGTCTCCTGCTTATGAATGGTCCCAAGAGAGTGGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: QRRWGWRWHWHVSRC*CLLLMNGPKRVASA
Trigger: AGCAGAAGCCACTCTCTTGGGACCATTCATAAGCAGGAGACATCAACACCGTGACACATGCCAGTGCCACCGCCACCCCCACCTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS TCA 90 bp TTAGACTCGAAGTCATCAATGATGTGCAGGCTTCCATTTCGCAGTTaGCCTCCAGGCTGCTGCGTCGGGGTCCAGGCTGTGGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LDSKSSMMCRLPFRS*PPGCCVGVQAVACW
Trigger: CCAGCAGGCCACAGCCTGGACCCCGACGCAGCAGCCTGGAGGTCAACTGCGAAATGGAAGCCTGCACATCATTGATGACTTCGAGTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CCA 90 bp CTGGTCGCAATACAGGAAAGCCACCAGCAAACAGATCTCCCAGGGTaGGAGGTGTGCTCGCGCCTCGTGTGTTTGCAGAACCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LVAIQESHQQTDLPG*EVCSRLVCLQNLLL
Trigger: AAGGAGGAGGTTCTGCAAACACACGAGGCGCGAGCACACCTCCCACCCTGGGAGATCTGTTTGCTGGTGGCTTTCCTGTATTGCGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS-3UTR CAA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGGCAGCGGGGGTGGCGTaGGGGGAGGTGGCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRAAGVA*GEVAEV
Trigger: CACCTCCGCCACCTCCCCCAACGCCACCCCCGCTGC...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCGCAGCGGGGGTGGCGTaGGGGGAGGTGGCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: KGGYLSARGCTFSSEELIAAGVA*GEVAEV
Trigger: CACCTCCGCCACCTCCCCCAACGCCACCCCCGCTGC...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS GCA 90 bp GTTCCTTTAGAACTCTCGATCTGCGGGGCACTGCGGTCGTTGATCTaGGTGACTTTGCGCAGGCGAGTTCCTTGCTGGATATCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: VPLELSICGALRSLI*VTLRRRVPCWISAN
Trigger: GTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGATCGAGAGTTCTAAAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 90 bp ATACAGGAAAGCCACCAGCAAACAGATCTCCCAGGGTGGGAGGTGTaGTCGCGCCTCGTGTGTTTGCAGAACCTCCTCCTTCTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: IQESHQQTDLPGWEV*SRLVCLQNLLLLCW
Trigger: CCAACAAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGAGCACACCTCCCACCCTGGGAGATCTGTTTGCTGGTGGCTTTCCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 90 bp TACCTGAGAATTTCTGCCTTTGATGTCATCAGAGCTCTGCCCGACTaGTTCCGCTTGGAGCCAGGGACCAGGTGTACGGCTTCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: YLRISAFDVIRALPD*FRLEPGTRCTASGD
Trigger: ATCCCCAGAAGCCGTACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTCTGATGACATCAAAGGCAGAAATTCTCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp AGGTGTTTCTTCAAGGACTGTCTTATCACAAAAGCAGCTGTCTGGCTTGCCTTCGGGCCCTGCCCTGTCTaGCCACCTGCTACATCCCGC +
Preference number: 5 (lower is better)
Translates to: RCFFKDCLITKAAVWLAFGPCPV*PPATSR
Trigger: GCGGGATGTAGCAGGTGGCAAGACAGGGCAGGGCCC...GAAGGCAAGCCAGACAGCTGCTTTTGTGATAAGACAGTCCTTGAAGAAACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTTGCGCCTCGGAGGTATaGCCTAGCCTGGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: REQDESDRDLGTRDTVNSCASEV*PSLGEA
Trigger: TGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGCA...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCGTGGGGTCTGACATGTaGTTCTGCAACCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELVGSDM*FCNLEP
Trigger: GGGTTCCAGGTTGCAGAACAACATGTCAGACCCCAC...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGTGTTACAGTTTGGGCTaGATTCATTCCCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWCYSLG*IHSPGE
Trigger: TTCTCCAGGGGAATGAATCAAGCCCAAACTGTAACA...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TCCCTGGAGGCTGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGTGCCTGGCTAATTTTTaGTATTTGAGTAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: SLEAARHCLGVGDTLLPLCLANF*YLSRQG
Trigger: ACCCTGTCTACTCAAATACAAAAAATTAGCCAGGCA...CAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCAGCCTCCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AATGGAAGCGAGACATGGCACCTCGTTCCCTGGAGGCTGCGCGGCACTGTCTGGAATACACGTGAAACATaGGAGGAGTCACAGACTGCA +
Preference number: 5 (lower is better)
Translates to: NGSETWHLVPWRLRGTVWNTRET*EESQTA
Trigger: TGCAGTCTGTGACTCCTCCAATGTTTCACGTGTATT...CCAGACAGTGCCGCGCAGCCTCCAGGGAACGAGGTGCCATGTCTCGCTTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTGGGCCGCTGATGGTTTaGTTGGGAAGCCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: REQDESDRDLGTRDTVNSGPLMV*LGSLGE
Trigger: CTCTCCCAGGCTTCCCAACAAAACCATCAGCGGCCC...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTGCGCAGGCGAGTTCCTaGCTGGATATCAGCCAACAG +
Preference number: 5 (lower is better)
Translates to: REQDESDRDLGTRDTVNSAQASS*LDISQQ
Trigger: CTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGC...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCGGGCCGCTGATGGTTTaGTTGGGAAGCCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: GATMAAHLFICTSVIRSSGPLMV*LGSLGE
Trigger: CTCTCCCAGGCTTCCCAACAAAACCATCAGCGGCCC...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp CTTTTTCATGTCATATTTTCCATGGAAGTCCACACTCGAAGCAAGGGCAGAAGGCTGGCGGGCTCCGCTTaGAGCCCCGGATACCCACAA +
Preference number: 5 (lower is better)
Translates to: LFHVIFSMEVHTRSKGRRLAGSA*SPGYPQ
Trigger: TTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCCAG...CCTTCTGCCCTTGCTTCGAGTGTGGACTTCCATGGAAAATATGACATGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGAGGCTCCTGCGCATCTaGCGCAGGGCTGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LICREEIPKSHKAGYWDGRLLRI*RRAGGL
Trigger: GAGCCCGCCAGCCCTGCGCAAGATGCGCAGGAGCCT...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATAAGGTGGAATTGCCTTaGTCTAGGGTCTTCTTAATC +
Preference number: 5 (lower is better)
Translates to: CAALSGCGGHATSSELHHKVELP*SRVFLI
Trigger: GATTAAGAAGACCCTAGACAAAGGCAATTCCACCTT...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp CCACCTTGGCTCCTGCAAGCTGTATGCAAGCTGCTCCAGGAACACGTGCCCAGTCACACAGTTGCAGAATaGCCTGGTTTAACTGCAAGT +
Preference number: 5 (lower is better)
Translates to: PPWLLQAVCKLLQEHVPSHTVAE*PGLTAS
Trigger: ACTTGCAGTTAAACCAGGCAATTCTGCAACTGTGTG...ACTGGGCACGTGTTCCTGGAGCAGCTTGCATACAGCTTGCAGGAGCCAAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS GCA 90 bp AAACAGATCTCCCAGGGTGGGAGGTGTGCTCGCGCCTCGTGTGTTTaGAGAACCTCCTCCTTCTTTGTTGGTTCCTTTAGAACTCTCGAT +
Preference number: 5 (lower is better)
Translates to: KQISQGGRCARASCV*RTSSFFVGSFRTLD
Trigger: ATCGAGAGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGAGCACACCTCCCACCCTGGGAGATCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS-3UTR CAA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCCTGGCGGGCTCCGCTTaGAGCCCCGGATACCCACAA +
Preference number: 5 (lower is better)
Translates to: KGGYLSARGCTFSSEELILAGSA*SPGYPQ
Trigger: TTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCCAG...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCGGAATGAATGTGGAGTaGTCAGGCAAGGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELGMNVE*SGKVLL
Trigger: AAGGAGAACCTTGCCTGACAACTCCACATTCATTCC...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp CAAGGGGTTAAACCTTTACAGCGCCCAAGGGACTCAGTGCACCAGCATGAGCTCACTCTGAAGGTGGAATaGCCTTTGTCTAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QGVKPLQRPRDSVHQHELTLKVE*PLSRVF
Trigger: GAAGACCCTAGACAAAGGCAATTCCACCTTCAGAGT...GAGCTCATGCTGGTGCACTGAGTCCCTTGGGCGCTGTAAAGGTTTAACCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAATCGCGCCTCGTGTGTTaGCAGAACCTCCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQESRLVC*QNLLLL
Trigger: AAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGA...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATCCGCTGATGGTTTTGTaGGGAAGCCTGGGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNPLMVL*GSLGEG
Trigger: GCCCTCTCCCAGGCTTCCCAACAAAACCATCAGCGG...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAAGTGGCCTGCTGGCTCTaGCTTGAAAGCTCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQEVACWL*LESSVV
Trigger: TACCACAGAGCTTTCAAGCAAGAGCCAGCAGGCCAC...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TGCGCGGCACTGTCTGGGTGTGGGGGACACGCTACTTCCTCTGAGCTGCATCATGCCAATAAGAAGCCGTaGTGGATATTTATAACTTTG +
Preference number: 5 (lower is better)
Translates to: CAALSGCGGHATSSELHHANKKP*WIFITL
Trigger: CAAAGTTATAAATATCCACAACGGCTTCTTATTGGC...ATGATGCAGCTCAGAGGAAGTAGCGTGTCCCCCACACCCAGACAGTGCCGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AGGGAACAGGATGAAAGTGACAGAGACTTGGGCACGAGGGACACTGTAAACAGTCCTGGAGAAGGGAATTaGACCCTGGCTCACTTGCTT +
Preference number: 5 (lower is better)
Translates to: REQDESDRDLGTRDTVNSPGEGN*TLAHLL
Trigger: AAGCAAGTGAGCCAGGGTCAAATTCCCTTCTCCAGG...ACTGTTTACAGTGTCCCTCGTGCCCAAGTCTCTGTCACTTTCATCCTGTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCATGCCCATCTCTTTATTaGTACCTCTGTGATCAGAAG +
Preference number: 5 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPCPSLY*YLCDQK
Trigger: CTTCTGATCACAGAGGTACAAATAAAGAGATGGGCA...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp AAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCACACTAATGGCCACCAGCCCTaGAAATCCCCAGGAGGCCAC +
Preference number: 5 (lower is better)
Translates to: KLASICSGDSREAPFCHTNGHQP*KSPGGH
Trigger: GTGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATT...AGTGTGACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTTTGATCTGCGTGACTTaGCGCAGGCGAGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISLICVT*RRRVPC
Trigger: GCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAA...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp GCAAGGACAGGAGGAACAAAATGGCCACCAGCCCTTGAAATCCCCAGGAGGCCATCAGAGTTGCTAAACTaGCTTCTATATGTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: ARTGGTKWPPALEIPRRPSELLN*LLYVVV
Trigger: CACCACTACATATAGAAGCAAGTTTAGCAACTCTGA...TGGCCTCCTGGGGATTTCAAGGGCTGGTGGCCATTTTGTTCCTCCTGTCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp ATGTTTTTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGACCGGGAGGTTCCCTTaGGTCAGTGGGCCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: MFLICREEIPKSHKAGYWTGRFP*VSGPGG
Trigger: CCCACCCGGCCCACTGACCAAAGGGAACCTCCCGGT...CCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGACCGGGAGGTTCCCTTaGGTCAGTGGGCCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SSKIHETNYIRQILPMQLTGRFP*VSGPGG
Trigger: CCCACCCGGCCCACTGACCAAAGGGAACCTCCCGGT...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATGTGGCCTGCTGGCTCTaGCTTGAAAGCTCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNVACWL*LESSVV
Trigger: TACCACAGAGCTTTCAAGCAAGAGCCAGCAGGCCAC...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp AACATCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCATTGACCCTGGCTCACTaGCTTCCATCTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: NIRGQAASKNTFPLPTGSLTLAH*LPSGMR
Trigger: TCTCATTCCAGATGGAAGCAAGTGAGCCAGGGTCAA...TGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TCAGGGGTCAGGCAGCAAGCAAAAACACATTTCCACTCCCTACAGGATCAAGAAGGGTTCAAGCAATTCTaGTGCCTGAACCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: SGVRQQAKTHFHSLQDQEGFKQF*CLNLPS
Trigger: ACTTGGGAGGTTCAGGCACAAGAATTGCTTGAACCC...TTCTTGATCCTGTAGGGAGTGGAAATGTGTTTTTGCTTGCTGCCTGACCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TCAGTTTTTCTCACAGGCCATCATAACCAAGGAAGAATGGGAAGTGATTGGCATTCGCGCCTCGTGTGTTaGCAGAACCTCCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SVFLTGHHNQGRMGSDWHSRLVC*QNLLLL
Trigger: AAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGA...ATGCCAATCACTTCCCATTCTTCCTTGGTTATGATGGCCTGTGAGAAAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp AAAGGGGGATACTTATCTGCTAGAGGATGTACTTTTTCCTCTGAGGAACTCATCGACACAAGCGGAGTTTaGATGGGGGAGGAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: KGGYLSARGCTFSSEELIDTSGV*MGEEEG
Trigger: TCCCTCTTCCTCCCCCATCAAAACTCCGCTTGTGTC...GATGAGTTCCTCAGAGGAAAAAGTACATCCTCTAGCAGATAAGTATCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGCCCGACTGCTTCCGCTaGGAGCCAGGGACCAGGTGT +
Preference number: 5 (lower is better)
Translates to: SSKIHETNYIRQILPMQLPDCFR*EPGTRC
Trigger: ACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGG...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GGCGGGGACTGTGTGACTCAGATGTCTCTAAGTCTGAGTTTACAGTCAAGGGGTGAATGTGTGCGTGGGTaGTTGCAAAGCAAATTTCTT +
Preference number: 5 (lower is better)
Translates to: GGDCVTQMSLSLSLQSRGECVRG*LQSKFL
Trigger: AAGAAATTTGCTTTGCAACAACCCACGCACACATTC...ACCCCTTGACTGTAAACTCAGACTTAGAGACATCTGAGTCACACAGTCCCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGTGCGCCTCGGAGGTATaGCCTAGCCTGGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SSKIHETNYIRQILPMQLCASEV*PSLGEA
Trigger: TGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGCA...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS TCA 90 bp GAGAATTCCTGGTTTTACATTCAGAGACATGAGGCTTGTGTTACCTaGGAATTTCTGCCTTTGATGTCATCAGAGCTCTGCCCGACTGCT +
Preference number: 5 (lower is better)
Translates to: ENSWFYIQRHEACVT*EFLPLMSSELCPTA
Trigger: AGCAGTCGGGCAGAGCTCTGATGACATCAAAGGCAGAAATTCTCAGGTAACACAAGCCTCATGTCTCTGAATGTAAAACCAGGAATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATGCATGTGTCACGGTGTaGATGTCTCCTGCTTATGAA +
Preference number: 5 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNACVTV*MSPAYE
Trigger: TTCATAAGCAGGAGACATCAACACCGTGACACATGC...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GAATTCAGTGATAGGTCTCAAGGGGAGATGGGATGCCACATTCCTGAGATTTCTAGGAGCACTGGCTACTaGGAGGATTATTCAGTTACA +
Preference number: 5 (lower is better)
Translates to: EFSDRSQGEMGCHIPEISRSTGY*EDYSVT
Trigger: TGTAACTGAATAATCCTCCAAGTAGCCAGTGCTCCT...AGAAATCTCAGGAATGTGGCATCCCATCTCCCCTTGAGACCTATCACTGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TTGCTAAACTTGCTTCTATATGTAGTGGTGATTCCAGGGAAGCCCCCTTTTGTCAAGCAGCTGTCTGGCTaGCCTTCTAGTTCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: LLNLLLYVVVIPGKPPFVKQLSG*PSSSVH
Trigger: ATGAACAGAACTAGAAGGCAAGCCAGACAGCTGCTT...GACAAAAGGGGGCTTCCCTGGAATCACCACTACATATAGAAGCAAGTTTAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATCTCAGGTCACTTTCCTaGATGTTCCACACAGTTGCA +
Preference number: 5 (lower is better)
Translates to: ATMAAHLFICTSVIRSSNLRSLS*MFHTVA
Trigger: TGCAACTGTGTGGAACATCAAGGAAAGTGACCTGAG...ATTGCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAATCTTAAGGTCTTCTaGGTCTTTTCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: GATMAAHLFICTSVIRSSNLKVF*VFSEPV
Trigger: CACAGGCTCAGAAAAGACCAAGAAGACCTTAAGATT...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp CAGAAATGGGGAGATTATTGTTCGACTGAATACATGTTTTCAAAGAAACAAAGGGCGCAGGCGAGTTCCTaGCTGGATATCAGCCAACAG +
Preference number: 5 (lower is better)
Translates to: QKWGDYCSTEYMFSKKQRAQASS*LDISQQ
Trigger: CTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGC...CCTTTGTTTCTTTGAAAACATGTATTCAGTCGAACAATAATCTCCCCATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp ATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATTCTCTCTACCTGTTAACGAACCTCCTCCTTCTTaGTTGGTTCCTTTAGAACTC +
Preference number: 5 (lower is better)
Translates to: IPGAFSSAIFSEFSLPVNEPPPS*LVPLEL
Trigger: GAGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTTC...GTTAACAGGTAGAGAGAATTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp GGTGCAACAATGGCTGCCCATCTCTTTATTTGTACCTCTGTGATCAGAAGCAGCAGTTCTGTTCATTTCTaGTGGGTACTAGTACTTGAA +
Preference number: 5 (lower is better)
Translates to: GATMAAHLFICTSVIRSSSSVHF*WVLVLE
Trigger: TTCAAGTACTAGTACCCACAAGAAATGAACAGAACT...GCTGCTTCTGATCACAGAGGTACAAATAAAGAGATGGGCAGCCATTGTTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp TTAATCTGTAGGGAAGAAATACCAAAATCTCATAAAGCTGGCTACTGGGATGGGGAACCTCCTCCTTCTTaGTTGGTTCCTTTAGAACTC +
Preference number: 5 (lower is better)
Translates to: LICREEIPKSHKAGYWDGEPPPS*LVPLEL
Trigger: GAGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTTC...CCCATCCCAGTAGCCAGCTTTATGAGATTTTGGTATTTCTTCCCTACAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242140.9
CDS-3UTR CAA 90 bp TGCAATTGTTGTCCACAGATTCCTGGTGCTTTCTCCTCTGCCATCTTCTCAGAATGCAGAATGTCAGAGTaGCTAAACTTGCTTCTATAT +
Preference number: 5 (lower is better)
Translates to: CNCCPQIPGAFSSAIFSECRMSE*LNLLLY
Trigger: ATATAGAAGCAAGTTTAGCAACTCTGACATTCTGCA...TTCTGAGAAGATGGCAGAGGAGAAAGCACCAGGAATCTGTGGACAACAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS-3UTR CAA 90 bp AGTTCCAAAATACATGAGACAAATTACATCAGACAGATTCTGCCAATGCAATTGTCGTTACTGCAATTCTaGCATCAGCTGTGGTTAGAA +
Preference number: 5 (lower is better)
Translates to: SSKIHETNYIRQILPMQLSLLQF*HQLWLE
Trigger: TTCTAACCACAGCTGATGCAAGAATTGCAGTAACGA...CAATTGCATTGGCAGAATCTGTCTGATGTAATTTGTCTCATGTATTTTGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS GCA 72 bp CTCCAAGCGGCGCCGCTACCGCCGAGCTGCGCTCGGTaGGCCCGGCTCGCTCCCCGGCCACCGGCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: LQAAPLPPSCAR*ARLAPRPPALV
Trigger: CACCAGAGCCGGTGGCCGGGGAGCGAGCCGGGCGCACCGAGCGCAGCTCGGCGGTAGCGGCGCCGCTTGGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5
CDS CAA 90 bp GCGGGAGGCTCCTGCGCATCTTGCGCAGGGCTGGCGGGCTCCGCTTaGAGCCCCGGATACCCACAAGGTGGGAGCAGAGGGAGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: AGGSCASCAGLAGSA*SPGYPQGGSRGSGG
Trigger: GCCCCCGCTCCCTCTGCTCCCACCTTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCCAGCCCTGCGCAAGATGCGCAGGAGCCTCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp GGGCGAGGCGGGGCTGTCCTGGCAGCGCCATGCGCCTCGGAGGTATaGCCTAGCCTGGGAGAGGCAGGCGGGATAAGCGGGCCGCTGATG +
Preference number: 6 (lower is better)
Translates to: GRGGAVLAAPCASEV*PSLGEAGGISGPLM
Trigger: CATCAGCGGCCCGCTTATCCCGCCTGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGCATGGCGCTGCCAGGACAGCCCCGCCTCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 72 bp ACGTTGGGGCGAGGCGGGGCTGTCCTGGCAGCGCCATaGGCCTCGGAGGTATTGCCTAGCCTGGGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: TLGRGGAVLAAP*ASEVLPSLGEA
Trigger: TGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGCATGGCGCTGCCAGGACAGCCCCGCCTCGCCCCAACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp GAGGCAGGCGGGATAAGCGGGCCGCTGATGGTTTTGTaGGGAAGCCTGGGAGAGGGCGCGCGGGAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: EAGGISGPLMVL*GSLGEGAREPG
Trigger: CCCTGGCTCCCGCGCGCCCTCTCCCAGGCTTCCCAACAAAACCATCAGCGGCCCGCTTATCCCGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp GGGGCTGTCCTGGCAGCGCCATGCGCCTCGGAGGTATaGCCTAGCCTGGGAGAGGCAGGCGGGATAAGCGGG +
Preference number: 6 (lower is better)
Translates to: GAVLAAPCASEV*PSLGEAGGISG
Trigger: CCCGCTTATCCCGCCTGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGCATGGCGCTGCCAGGACAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS TCA 72 bp CCTGCGCATCTTGCGCAGGGCTGGCGGGCTCCGCTTTaGGCCCCGGATACCCACAAGGTGGGAGCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: PAHLAQGWRAPL*APDTHKVGAEG
Trigger: TCCCTCTGCTCCCACCTTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCCAGCCCTGCGCAAGATGCGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp TCCTGCGCATCTTGCGCAGGGCTGGCGGGCTCCGCTTaGAGCCCCGGATACCCACAAGGTGGGAGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SCASCAGLAGSA*SPGYPQGGSRG
Trigger: CCCTCTGCTCCCACCTTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCCAGCCCTGCGCAAGATGCGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp CCTCCAGGCTGCTGCGTCGGGGTCCAGGCTGTGGCCTGCTGGCTCTaGCTTGAAAGCTCTGTGGTAGGTGATCTCGCAGGGGGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PPGCCVGVQAVACWL*LESSVVGDLAGGAG
Trigger: TCCAGCACCCCCTGCGAGATCACCTACCACAGAGCTTTCAAGCAAGAGCCAGCAGGCCACAGCCTGGACCCCGACGCAGCAGCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp TGCTGCGTCGGGGTCCAGGCTGTGGCCTGCTGGCTCTaGCTTGAAAGCTCTGTGGTAGGTGATCTCGCAGGG +
Preference number: 6 (lower is better)
Translates to: CCVGVQAVACWL*LESSVVGDLAG
Trigger: CCCTGCGAGATCACCTACCACAGAGCTTTCAAGCAAGAGCCAGCAGGCCACAGCCTGGACCCCGACGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CCA 72 bp AACCACCGGGAGGTTCCCTTTGGTCAGTGGGCCGGGTaGGGACACAAGCGGAGTTTTGATGGGGGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: NHREVPFGQWAG*GHKRSFDGGGR
Trigger: TCTTCCTCCCCCATCAAAACTCCGCTTGTGTCCCCACCCGGCCCACTGACCAAAGGGAACCTCCCGGTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp GGCACTGCGGTCGTTGATCTGCGTGACTTTGCGCAGGCGAGTTCCTaGCTGGATATCAGCCAACAGCGCACTCCGGCCTTTCGGATCTGC +
Preference number: 6 (lower is better)
Translates to: GTAVVDLRDFAQASS*LDISQQRTPAFRIC
Trigger: GCAGATCCGAAAGGCCGGAGTGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 72 bp AGCCACCAGCAAACAGATCTCCCAGGGTGGGAGGTGTaGTCGCGCCTCGTGTGTTTGCAGAACCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: SHQQTDLPGWEV*SRLVCLQNLLL
Trigger: AAGGAGGAGGTTCTGCAAACACACGAGGCGCGAGCACACCTCCCACCCTGGGAGATCTGTTTGCTGGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 72 bp CTGCCCTGTCTTGCCACCTGCTACATCCCGCTGGCCTaGTGGTCGCAATACAGGAAAGCCACCAGCAAACAG +
Preference number: 6 (lower is better)
Translates to: LPCLATCYIPLA*WSQYRKATSKQ
Trigger: CTGTTTGCTGGTGGCTTTCCTGTATTGCGACCAGCAGGCCAGCGGGATGTAGCAGGTGGCAAGACAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp GCAGAGGAGGTGGGGGTGGCGGTGGCACTGGCATGTGTCACGGTGTaGATGTCTCCTGCTTATGAATGGTCCCAAGAGAGTGGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: AEEVGVAVALACVTV*MSPAYEWSQESGFC
Trigger: GCAGAAGCCACTCTCTTGGGACCATTCATAAGCAGGAGACATCAACACCGTGACACATGCCAGTGCCACCGCCACCCCCACCTCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp GAACTCTCGATCTGCGGGGCACTGCGGTCGTTGATCTGCGTGACTTaGCGCAGGCGAGTTCCTTGCTGGATATCAGCCAACAGCGCACTC +
Preference number: 6 (lower is better)
Translates to: ELSICGALRSLICVT*RRRVPCWISANSAL
Trigger: GAGTGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGATCGAGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp ATTTCTGCCTTTGATGTCATCAGAGCTCTGCCCGACTGCTTCCGCTaGGAGCCAGGGACCAGGTGTACGGCTTCTGGGGATCTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: ISAFDVIRALPDCFR*EPGTRCTASGDLAG
Trigger: CCCAGCAAGATCCCCAGAAGCCGTACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTCTGATGACATCAAAGGCAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 72 bp GAACTCTCGATCTGCGGGGCACTGCGGTCGTTGATCTaGGTGACTTTGCGCAGGCGAGTTCCTTGCTGGATA +
Preference number: 6 (lower is better)
Translates to: ELSICGALRSLI*VTLRRRVPCWI
Trigger: TATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGATCGAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CCA 72 bp CCCTGTCTTGCCACCTGCTACATCCCGCTGGCCTGCTaGTCGCAATACAGGAAAGCCACCAGCAAACAGATC +
Preference number: 6 (lower is better)
Translates to: PCLATCYIPLAC*SQYRKATSKQI
Trigger: GATCTGTTTGCTGGTGGCTTTCCTGTATTGCGACCAGCAGGCCAGCGGGATGTAGCAGGTGGCAAGACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp ATCTGCGGGGCACTGCGGTCGTTGATCTGCGTGACTTaGCGCAGGCGAGTTCCTTGCTGGATATCAGCCAAC +
Preference number: 6 (lower is better)
Translates to: ICGALRSLICVT*RRRVPCWISAN
Trigger: GTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp CCTTTAGAACTCTCGATCTGCGGGGCACTGCGGTCGTaGATCTGCGTGACTTTGCGCAGGCGAGTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: PLELSICGALRS*ICVTLRRRVPC
Trigger: GCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGATCGAGAGTTCTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp TTTGATGTCATCAGAGCTCTGCCCGACTGCTTCCGCTaGGAGCCAGGGACCAGGTGTACGGCTTCTGGGGAT +
Preference number: 6 (lower is better)
Translates to: FDVIRALPDCFR*EPGTRCTASGD
Trigger: ATCCCCAGAAGCCGTACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTCTGATGACATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp TTTAGACTCGAAGTCATCAATGATGTGCAGGCTTCCATTTCGCAGTaGACCTCCAGGCTGCTGCGTCGGGGTCCAGGCTGTGGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: FRLEVINDVQASISQ*TSRLLRRGPGCGLL
Trigger: CAGCAGGCCACAGCCTGGACCCCGACGCAGCAGCCTGGAGGTCAACTGCGAAATGGAAGCCTGCACATCATTGATGACTTCGAGTCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS TCA 72 bp TGGGGGTGGCGGTGGCACTGGCATGTGTCACGGTGTTaGTGTCTCCTGCTTATGAATGGTCCCAAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: WGWRWHWHVSRC*CLLLMNGPKRV
Trigger: CACTCTCTTGGGACCATTCATAAGCAGGAGACATCAACACCGTGACACATGCCAGTGCCACCGCCACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS TCA 72 bp AAGTCATCAATGATGTGCAGGCTTCCATTTCGCAGTTaGCCTCCAGGCTGCTGCGTCGGGGTCCAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: KSSMMCRLPFRS*PPGCCVGVQAV
Trigger: CACAGCCTGGACCCCGACGCAGCAGCCTGGAGGTCAACTGCGAAATGGAAGCCTGCACATCATTGATGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 72 bp TCGTTGATCTGCGTGACTTTGCGCAGGCGAGTTCCTTaGTGGATATCAGCCAACAGCGCACTCCGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SLICVTLRRRVP*WISANSALRPF
Trigger: GAAAGGCCGGAGTGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 72 bp ATTTCTGCCTTTGATGTCATCAGAGCTCTGCCCGACTaGTTCCGCTTGGAGCCAGGGACCAGGTGTACGGCT +
Preference number: 6 (lower is better)
Translates to: ISAFDVIRALPD*FRLEPGTRCTA
Trigger: AGCCGTACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTCTGATGACATCAAAGGCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CCA 72 bp TTGATCTGCGTGACTTTGCGCAGGCGAGTTCCTTGCTaGATATCAGCCAACAGCGCACTCCGGCCTTTCGGA +
Preference number: 6 (lower is better)
Translates to: LICVTLRRRVPC*ISANSALRPFG
Trigger: TCCGAAAGGCCGGAGTGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp GTCGTTGATCTGCGTGACTTTGCGCAGGCGAGTTCCTaGCTGGATATCAGCCAACAGCGCACTCCGGCCTTT +
Preference number: 6 (lower is better)
Translates to: VVDLRDFAQASS*LDISQQRTPAF
Trigger: AAAGGCCGGAGTGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp GAAGTCATCAATGATGTGCAGGCTTCCATTTCGCAGTaGACCTCCAGGCTGCTGCGTCGGGGTCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: EVINDVQASISQ*TSRLLRRGPGC
Trigger: ACAGCCTGGACCCCGACGCAGCAGCCTGGAGGTCAACTGCGAAATGGAAGCCTGCACATCATTGATGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS GCA 72 bp TCCCAGGGTGGGAGGTGTGCTCGCGCCTCGTGTGTTTaGAGAACCTCCTCCTTCTTTGTTGGTTCCTTTAGA +
Preference number: 6 (lower is better)
Translates to: SQGGRCARASCV*RTSSFFVGSFR
Trigger: TCTAAAGGAACCAACAAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGAGCACACCTCCCACCCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CCA 72 bp GCATGTGTCACGGTGTTGATGTCTCCTGCTTATGAATaGTCCCAAGAGAGTGGCTTCTGCTCTGCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: ACVTVLMSPAYE*SQESGFCSAGG
Trigger: GCCACCTGCAGAGCAGAAGCCACTCTCTTGGGACCATTCATAAGCAGGAGACATCAACACCGTGACACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 72 bp CTCGCGCCTCGTGTGTTTGCAGAACCTCCTCCTTCTTaGTTGGTTCCTTTAGAACTCTCGATCTGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: LAPRVFAEPPPS*LVPLELSICGA
Trigger: TGCCCCGCAGATCGAGAGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS CAA 90 bp TTGTTGGTTCCTTTAGAACTCTCGATCTGCGGGGCACTGCGGTCGTaGATCTGCGTGACTTTGCGCAGGCGAGTTCCTTGCTGGATATCA +
Preference number: 6 (lower is better)
Translates to: LLVPLELSICGALRS*ICVTLRRRVPCWIS
Trigger: TGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGATCGAGAGTTCTAAAGGAACCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS TCA 72 bp ACTGGCATGTGTCACGGTGTTGATGTCTCCTGCTTATaGATGGTCCCAAGAGAGTGGCTTCTGCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: TGMCHGVDVSCL*MVPREWLLLCR
Trigger: CCTGCAGAGCAGAAGCCACTCTCTTGGGACCATTCATAAGCAGGAGACATCAACACCGTGACACATGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242140.9
ENST00000409123.5
CDS TCA 72 bp TGGTTTTACATTCAGAGACATGAGGCTTGTGTTACCTaGGAATTTCTGCCTTTGATGTCATCAGAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: WFYIQRHEACVT*EFLPLMSSELC
Trigger: GCAGAGCTCTGATGACATCAAAGGCAGAAATTCTCAGGTAACACAAGCCTCATGTCTCTGAATGTAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409123.5