RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WFDC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000124116

Ensembl transcript IDs: ENST00000243938.9, ENST00000337205.8, ENST00000372630.2, ENST00000372632.6, ENST00000462017.5, ENST00000465935.1, ENST00000467679.5, ENST00000471401.5, ENST00000474942.5, ENST00000481847.5, ENST00000487343.5, ENST00000490877.1, ENST00000493693.5

Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGCTCTGGTCAGCGGCAGGAGGAGAAGCAGAGCAGAGAGGGCCATaGGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTC +
Preference number: 1 (lower is better)
Translates to: MLWSAAGGEAEQRGP*VPLEMSQAPGCHPL
Trigger: GAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTCTCTGCTCTGCTTCTCCTCCTGCCGCTGACCAGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR GCA 90 bp AGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATaGTCTGGTCAGCGGCAGGAGGAGAAGCAGAGCAGAGAGGGCCAT +
Preference number: 1 (lower is better)
Translates to: REAPHTHYPIQGYFP*SGQRQEEKQSREGH
Trigger: ATGGCCCTCTCTGCTCTGCTTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR TCA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGAGCAGAGAGGGCCATaGGTGCCCCTGGAAATGTCA +
Preference number: 2 (lower is better)
Translates to: STTHPLPNPGLFPMLWSAEQRGP*VPLEMS
Trigger: TGACATTTCCAGGGGCACTCATGGCCCTCTCTGCTC...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR GCA 90 bp CACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGAGAGGGCCATGAGTaGCCCTGGAAATGTCACAAG +
Preference number: 2 (lower is better)
Translates to: HHTPTTQSRAISHALVSGREGHE*PWKCHK
Trigger: CTTGTGACATTTCCAGGGGCACTCATGGCCCTCTCT...GCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR TCA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGATGTCACCCTCTCTTaGCTGCCAGGAAAAGCTTCC +
Preference number: 2 (lower is better)
Translates to: STTHPLPNPGLFPMLWSADVTLS*LPGKAS
Trigger: GGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATC...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR GCA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGAGAGAGGGCCATGAGTaGCCCTGGAAATGTCACAAG +
Preference number: 2 (lower is better)
Translates to: STTHPLPNPGLFPMLWSAREGHE*PWKCHK
Trigger: CTTGTGACATTTCCAGGGGCACTCATGGCCCTCTCT...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR GCA 90 bp CACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCTCACCCTCTCTTGACTaGCAGGAAAAGCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: HHTPTTQSRAISHALVSGSPSLD*QEKLPE
Trigger: TTCTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGA...GCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR CCA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTaGTCAGCGGCAGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGLFPML*SAAGGE
Trigger: TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAG...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR GCA 90 bp ACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCATCACCCTCTCTTGACTaGCAGGAAAAGCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: TTHPLPNPGLFPMLWSAASPSLD*QEKLPE
Trigger: TTCTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGA...TGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR CCA 90 bp CAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCACTATTTCCCATGCTCTaGTCAGCGGCAGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: QHQPLSGKRSTTHPLPNPLFPML*SAAGGE
Trigger: TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAG...TGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR-3UTR GCA 90 bp CAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCATCACCCTCTCTTGACTaGCAGGAAAAGCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: QHQPLSGKRSTTHPLPNPSPSLD*QEKLPE
Trigger: TTCTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGA...TGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR GCA 72 bp CCACACACCCACTACCCAATCCAGGGCTATTTCCCATaGTCTGGTCAGCGGCAGGAGGAGAAGCAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: PHTHYPIQGYFP*SGQRQEEKQSR
Trigger: TCTGCTCTGCTTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp CCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGAGGAGAATGTCTCCGAGGCAGGTaGGGCCACAGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLPNPGLFPMLWSAAGGECLRGR*GHSRCC
Trigger: GCAGCACCGGCTGTGGCCGCACCTGCCTCGGAGACA...TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR GCA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGTGTCTCCGAGGCAGGTaGGGCCACAGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGCLRGR*GHSRCC
Trigger: GCAGCACCGGCTGTGGCCGCACCTGCCTCGGAGACA...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR CCA 90 bp CCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGTGGGGGCAGGACTGGTaGGACACAGAAGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: PHTHYPIQGYFPCSGQRQWGQDW*DTEAAT
Trigger: TGTGGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCA...CTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp CCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGTGCGGCCACAGCCGGTaGTGCAGCATTTATGCCCCT +
Preference number: 4 (lower is better)
Translates to: PHTHYPIQGYFPCSGQRQCGHSR*CSIYAP
Trigger: AGGGGCATAAATGCTGCAGCACCGGCTGTGGCCGCA...CTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR TCA 90 bp GAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTGAGCAGAGAGGGCCATaGGTGCCCCTGGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: EGHECPWKCHKPQDVTLSEQRGP*VPLEMS
Trigger: TGACATTTCCAGGGGCACTCATGGCCCTCTCTGCTC...AGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp GAGAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTGACCACAGCCTGTGGTaGAGCACTTCTGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ERAMSAPGNVTSPRMSPSDHSLW*STSVQP
Trigger: CGGCTGAACAGAAGTGCTGCACCACAGGCTGTGGTC...AGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp CCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGACCACAGCCTGTGGTaGAGCACTTCTGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PHTHYPIQGYFPCSGQRQDHSLW*STSVQP
Trigger: CGGCTGAACAGAAGTGCTGCACCACAGGCTGTGGTC...CTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGGGCCACAGCCGGTGCTaGAGCATTTATGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGGHSRC*SIYAPG
Trigger: CCCAGGGGCATAAATGCTGCAGCACCGGCTGTGGCC...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR GCA 90 bp GAGAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCAGGGCTATTTCCCATaGTCTGGTCAGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ERAMSAPGNVTSPRMSPSQGYFP*SGQRQE
Trigger: CTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTG...AGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGTGGGGGCAGGACTGGTaGGACACAGAAGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGWGQDW*DTEAAT
Trigger: TGTGGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCA...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp ATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCTGGGGGCAGGACTGGTaGGACACAGAAGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: MSAPGNVTSPRMSPSLDCWGQDW*DTEAAT
Trigger: TGTGGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCA...GCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp CCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAATGGGGGCAGGACTGGTaGGACACAGAAGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: PLEMSQAPGCHPLLTARKWGQDW*DTEAAT
Trigger: TGTGGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCA...TTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGTTTTGGGGGCAGGACTaGTGGGACACAGAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: STTHPLPNPGLFPMLWSAFWGQD*WDTEAA
Trigger: GGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCAAAA...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp ACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGAGCAGAGAGGGCCATaGGTGCCCCTGGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: TTHPLPNPGLFPMLWSAAEQRGP*VPLEMS
Trigger: TGACATTTCCAGGGGCACTCATGGCCCTCTCTGCTC...TGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp TCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGGGCCACAGCCGGTGCTaGAGCATTTATGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGKRSTTHPLPNPGLFPMGHSRC*SIYAPG
Trigger: CCCAGGGGCATAAATGCTGCAGCACCGGCTGTGGCC...CATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR GCA 90 bp CCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAATGCGGCCACAGCCGGTaGTGCAGCATTTATGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLEMSQAPGCHPLLTARKCGHSR*CSIYAP
Trigger: AGGGGCATAAATGCTGCAGCACCGGCTGTGGCCGCA...TTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR GCA 90 bp ACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGAGGAGAAGCAGACAGGGCTATTTCCCATaGTCTGGTCAGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQSRAISHALVSGRRRSRQGYFP*SGQRQE
Trigger: CTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTG...TCTGCTTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp ACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCACAGGGCTATTTCCCATaGTCTGGTCAGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TTHPLPNPGLFPMLWSAAQGYFP*SGQRQE
Trigger: CTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTG...TGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp GAGAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCAGCATTTATGCCCCTaGGGACAGGATGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: ERAMSAPGNVTSPRMSPSQHLCP*GQDASP
Trigger: TGGGGATGCATCCTGTCCCCAGGGGCATAAATGCTG...AGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR CCA 90 bp CCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAGCCCACCAGAACTTTTaGACAATCACCGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PLEMSQAPGCHPLLTARKAHQNF*TITAPP
Trigger: GGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGC...TTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp AAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGCCCACCAGAACTTTTaGACAATCACCGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: KHHTPTTQSRAISHALVSAHQNF*TITAPP
Trigger: GGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGC...GCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp CACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCGTTCATGGTCAGTTTTaGGGGCAGGACTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: HHTPTTQSRAISHALVSGVHGQF*GQDWWD
Trigger: GTCCCACCAGTCCTGCCCCCAAAACTGACCATGAAC...GCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp GAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTGAAGCGGCCACAGCCTaGCTTGCAACATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: EGHECPWKCHKPQDVTLSEAATA*LATFFS
Trigger: GGAGAAAAATGTTGCAAGTCAGGCTGTGGCCGCTTC...AGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp CCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGAAGCGGCCACAGCCTaGCTTGCAACATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PHTHYPIQGYFPCSGQRQEAATA*LATFFS
Trigger: GGAGAAAAATGTTGCAAGTCAGGCTGTGGCCGCTTC...CTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp GCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACGCCCAGAGTATCAGCTaGGGTATGAGCAGGACTAGG +
Preference number: 4 (lower is better)
Translates to: AMSAPGNVTSPRMSPSLDAQSIS*GMSRTR
Trigger: CCTAGTCCTGCTCATACCTCAGCTGATACTCTGGGC...GTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372630.2
CDS-3UTR GCA 90 bp GAGAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTAGAGAGGGCCATGAGTaGCCCTGGAAATGTCACAAG +
Preference number: 4 (lower is better)
Translates to: ERAMSAPGNVTSPRMSPSREGHE*PWKCHK
Trigger: CTTGTGACATTTCCAGGGGCACTCATGGCCCTCTCT...AGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp AGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGCAGCATTTATGCCCCTaGGGACAGGATGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SAPGNVTSPRMSPSLDCQQHLCP*GQDASP
Trigger: TGGGGATGCATCCTGTCCCCAGGGGCATAAATGCTG...CTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR CCA 90 bp GGTCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATTTTTGGGGGCAGGACTaGTGGGACACAGAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GQHQPLSGKRSTTHPLPNFWGQD*WDTEAA
Trigger: GGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCAAAA...ATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337205.8
CDS-3UTR CCA 90 bp CCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGAGGAGAAGTTCATGGTCAGTTTTaGGGGCAGGACTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PLPNPGLFPMLWSAAGGEVHGQF*GQDWWD
Trigger: GTCCCACCAGTCCTGCCCCCAAAACTGACCATGAAC...TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp ACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGAGGAGAAGCAGAGAAGCGGCCACAGCCTaGCTTGCAACATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TQSRAISHALVSGRRRSREAATA*LATFFS
Trigger: GGAGAAAAATGTTGCAAGTCAGGCTGTGGCCGCTTC...TCTGCTTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp TCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCGAGCAGAGAGGGCCATaGGTGCCCCTGGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: SAPAFIGKEKHHTPTTQSEQRGP*VPLEMS
Trigger: TGACATTTCCAGGGGCACTCATGGCCCTCTCTGCTC...GGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp GAGAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTACACAGCTCTTGTTaGAGCCAAGCGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: ERAMSAPGNVTSPRMSPSLHSSC*SQACSI
Trigger: AATGCTGCACGCTTGGCTGCAACAAGAGCTGTGTAG...AGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR CCA 90 bp GAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTTGCATGGGTTCTTATaGGGAGGGCATTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: EGHECPWKCHKPQDVTLSLHGFL*GGHSPS
Trigger: AGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAA...AGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp CCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGCACAATTCATCACCCTaGCACAGCTCTTTGCATGGG +
Preference number: 4 (lower is better)
Translates to: PHTHYPIQGYFPCSGQRQHNSSP*HSSLHG
Trigger: CCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTG...CTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp GAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCTTTTGGGGGCAGGACTaGTGGGACACAGAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: EMSQAPGCHPLLTARKSFFWGQD*WDTEAA
Trigger: GGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCAAAA...GAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp AGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGCTATTTCCCATGCTCTaGTCAGCGGCAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SAPGNVTSPRMSPSLDCQLFPML*SAAGGE
Trigger: TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAG...CTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp GAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCGACCACAGCCTGTGGTaGAGCACTTCTGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EMSQAPGCHPLLTARKSFDHSLW*STSVQP
Trigger: CGGCTGAACAGAAGTGCTGCACCACAGGCTGTGGTC...GAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp ATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCAGAGAGGGCCATGAGTaGCCCTGGAAATGTCACAAG +
Preference number: 4 (lower is better)
Translates to: MSAPGNVTSPRMSPSLDCREGHE*PWKCHK
Trigger: CTTGTGACATTTCCAGGGGCACTCATGGCCCTCTCT...GCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp CCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAACCGCCCATGTTCTCCTaGAGTTATCCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: PLEMSQAPGCHPLLTARKPPMFS*SYPGFQ
Trigger: CTGGAATCCTGGATAACTGCAGGAGAACATGGGCGG...TTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372630.2
CDS-3UTR CCA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGTTGCATGGGTTCTTATaGGGAGGGCATTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: STTHPLPNPGLFPMLWSALHGFL*GGHSPS
Trigger: AGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAA...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp ATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCGCACAGCTCTTTGCATaGGTTCTTATGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: MSAPGNVTSPRMSPSLDCAQLFA*VLMGRA
Trigger: TGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGC...GCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGGCACAGCTCTTTGCATaGGTTCTTATGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGAQLFA*VLMGRA
Trigger: TGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGC...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp CAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCATCCGACCACAGCCTGTaGTGCAGCACTTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QHQPLSGKRSTTHPLPNPSDHSL*CSTSVQ
Trigger: CTGAACAGAAGTGCTGCACCACAGGCTGTGGTCGGA...TGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp TCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCTCCGACCACAGCCTGTaGTGCAGCACTTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SAPAFIGKEKHHTPTTQSSDHSL*CSTSVQ
Trigger: CTGAACAGAAGTGCTGCACCACAGGCTGTGGTCGGA...GGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp CCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTGCCCACCAGAACTTTTaGACAATCACCGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PLSGKRSTTHPLPNPGLFAHQNF*TITAPP
Trigger: GGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGC...AAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp CCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTTTTTGGGGGCAGGACTaGTGGGACACAGAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PLSGKRSTTHPLPNPGLFFWGQD*WDTEAA
Trigger: GGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCAAAA...AAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp TCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCGTTCATGGTCAGTTTTaGGGGCAGGACTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SAPAFIGKEKHHTPTTQSVHGQF*GQDWWD
Trigger: GTCCCACCAGTCCTGCCCCCAAAACTGACCATGAAC...GGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp ATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCCAGGTTCATGGTCAGTTTTaGGGGCAGGACTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: MSQAPGCHPLLTARKSFQVHGQF*GQDWWD
Trigger: GTCCCACCAGTCCTGCCCCCAAAACTGACCATGAAC...CTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp AAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCCTATTTCCCATGCTCTaGTCAGCGGCAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KHHTPTTQSRAISHALVSLFPML*SAAGGE
Trigger: TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAG...GCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp CAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGAAGCGGCCACAGCCTaGCTTGCAACATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QHQPLSGKRSTTHPLPNPEAATA*LATFFS
Trigger: GGAGAAAAATGTTGCAAGTCAGGCTGTGGCCGCTTC...TGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp ACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCATGTTGCAGCCAAGCGTaGAGCATTTCTTTACACCTG +
Preference number: 4 (lower is better)
Translates to: TTHPLPNPGLFPMLWSAACCSQA*SISLHL
Trigger: CAGGTGTAAAGAAATGCTGCACGCTTGGCTGCAACA...TGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR GCA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGTCACACAGCCAACAATaGACAGGCCCACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGSHSQQ*TGPPEL
Trigger: AAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp ATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCTCACACAGCCAACAATaGACAGGCCCACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: MSAPGNVTSPRMSPSLDCSHSQQ*TGPPEL
Trigger: AAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA...GCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGTCACCCTCTCTTGACTaGCAGGAAAAGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: STTHPLPNPGLFPMLWSASPSLD*QEKLPE
Trigger: TTCTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGA...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp TCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGAGAGGGCCATGAGTaGCCCTGGAAATGTCACAAG +
Preference number: 4 (lower is better)
Translates to: SAPAFIGKEKHHTPTTQSREGHE*PWKCHK
Trigger: CTTGTGACATTTCCAGGGGCACTCATGGCCCTCTCT...GGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGTTGCATGGGTTCTTATaGGGAGGGCATTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGLHGFL*GGHSPS
Trigger: AGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAA...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp AGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGACCTCACAGTCCAGTTaGGGTTCATGGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SAPGNVTSPRMSPSLDCQTSQSS*GSWSVL
Trigger: CAAAACTGACCATGAACCCCAACTGGACTGTGAGGT...CTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp CCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGAGGAGAAACCTCACAGTCCAGTTaGGGTTCATGGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PLPNPGLFPMLWSAAGGETSQSS*GSWSVL
Trigger: CAAAACTGACCATGAACCCCAACTGGACTGTGAGGT...TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGACCTCACAGTCCAGTTaGGGTTCATGGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: STTHPLPNPGLFPMLWSATSQSS*GSWSVL
Trigger: CAAAACTGACCATGAACCCCAACTGGACTGTGAGGT...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp TCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCCTATTTCCCATGCTCTaGTCAGCGGCAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SAPAFIGKEKHHTPTTQSLFPML*SAAGGE
Trigger: TTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAG...GGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp ACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGATGATGCTGAGAGTTaGGACAAGAGCTCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: TTHPLPNPGLFPMLWSAADDAES*DKSSVQ
Trigger: CTGAACTGAGCTCTTGTCCCAACTCTCAGCATCATC...TGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp GCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACGATGATGCTGAGAGTTaGGACAAGAGCTCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: AMSAPGNVTSPRMSPSLDDDAES*DKSSVQ
Trigger: CTGAACTGAGCTCTTGTCCCAACTCTCAGCATCATC...GTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372630.2
ENST00000372632.6
CDS-3UTR TCA 90 bp CCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTGTATCAGCTGAGGTATaGGCAGGACTAGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PLSGKRSTTHPLPNPGLFVSAEV*AGLGMA
Trigger: GGCCATCCCTAGTCCTGCTCATACCTCAGCTGATAC...AAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372630.2
CDS-3UTR GCA 90 bp ATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCCAGCTACACAGCTCTTGTTaGAGCCAAGCGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: MSQAPGCHPLLTARKSFQLHSSC*SQACSI
Trigger: AATGCTGCACGCTTGGCTGCAACAAGAGCTGTGTAG...CTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR GCA 90 bp ATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCCAGTCACACAGCCAACAATaGACAGGCCCACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: MSQAPGCHPLLTARKSFQSHSQQ*TGPPEL
Trigger: AAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA...CTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CCA 90 bp ATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCCAGCACAATTCATCACCCTaGCACAGCTCTTTGCATGGG +
Preference number: 4 (lower is better)
Translates to: MSQAPGCHPLLTARKSFQHNSSP*HSSLHG
Trigger: CCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTG...CTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp CCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTTCCGACCACAGCCTGTaGTGCAGCACTTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PLSGKRSTTHPLPNPGLFSDHSL*CSTSVQ
Trigger: CTGAACAGAAGTGCTGCACCACAGGCTGTGGTCGGA...AAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp GCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTTTTGCATGTTCTCCTaGAGTTATCCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: AMSAPGNVTSPRMSPSLDFCMFS*SYPGFQ
Trigger: CTGGAATCCTGGATAACTGCAGGAGAACATGCAAAA...GTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp ACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCAGGAGGAGAAGCAGAGCATTCTCCCTCTTTTaGATGTTCTCCTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: TQSRAISHALVSGRRRSRAFSLF*MFSCSY
Trigger: ATAACTGCAGGAGAACATGCAAAAGAGGGAGAATGC...TCTGCTTCTCCTCCTGCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp ATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCCAGTGTTGCAGCCAAGCGTaGAGCATTTCTTTACACCTG +
Preference number: 4 (lower is better)
Translates to: MSQAPGCHPLLTARKSFQCCSQA*SISLHL
Trigger: CAGGTGTAAAGAAATGCTGCACGCTTGGCTGCAACA...CTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR GCA 90 bp GAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCTCACACAGCCAACAATaGACAGGCCCACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: EMSQAPGCHPLLTARKSFSHSQQ*TGPPEL
Trigger: AAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA...GAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp CCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTAGAGAGGGCCATGAGTaGCCCTGGAAATGTCACAAG +
Preference number: 4 (lower is better)
Translates to: PLSGKRSTTHPLPNPGLFREGHE*PWKCHK
Trigger: CTTGTGACATTTCCAGGGGCACTCATGGCCCTCTCT...AAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR GCA 90 bp ATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCTTTTGCATGTTCTCCTaGAGTTATCCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: MSAPGNVTSPRMSPSLDCFCMFS*SYPGFQ
Trigger: CTGGAATCCTGGATAACTGCAGGAGAACATGCAAAA...GCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp TCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGTTTTGCATGTTCTCCTaGAGTTATCCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SGKRSTTHPLPNPGLFPMFCMFS*SYPGFQ
Trigger: CTGGAATCCTGGATAACTGCAGGAGAACATGCAAAA...CATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR GCA 90 bp CAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGCATTCTCCCTCTTTTaGATGTTCTCCTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: QHQPLSGKRSTTHPLPNPAFSLF*MFSCSY
Trigger: ATAACTGCAGGAGAACATGCAAAAGAGGGAGAATGC...TGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CCA 90 bp CCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTACCTCACAGTCCAGTTaGGGTTCATGGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PLSGKRSTTHPLPNPGLFTSQSS*GSWSVL
Trigger: CAAAACTGACCATGAACCCCAACTGGACTGTGAGGT...AAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
3UTR CAA 72 bp CTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTaGACTGCCAGGAAAAGCTTCCAGAATTACCAAAGA +
Preference number: 4 (lower is better)
Translates to: LEMSQAPGCHPL*TARKSFQNYQR
Trigger: TCTTTGGTAATTCTGGAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: STTHPLPNPGLFPMLWSAGPPEL*DNHRPA
Trigger: GGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCC...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGGPPEL*DNHRPA
Trigger: GGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCC...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp CACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCGGTTCATGGTCAGTTTaGGGGGCAGGACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: HHTPTTQSRAISHALVSGGSWSV*GAGLVG
Trigger: TCCCACCAGTCCTGCCCCCAAAACTGACCATGAACC...GCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp GAGAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCCCTGGCACAGCTCTTaGCATGGGTTCTTATGGGGA +
Preference number: 5 (lower is better)
Translates to: ERAMSAPGNVTSPRMSPSPWHSS*HGFLWG
Trigger: TCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGG...AGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CAA 90 bp GGTCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: GQHQPLSGKRSTTHPLPNGPPEL*DNHRPA
Trigger: GGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCC...ATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337205.8
CDS-3UTR CAA 90 bp GCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACGGTTCATGGTCAGTTTaGGGGGCAGGACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: AMSAPGNVTSPRMSPSLDGSWSV*GAGLVG
Trigger: TCCCACCAGTCCTGCCCCCAAAACTGACCATGAACC...GTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp AGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGCCCTGGCACAGCTCTTaGCATGGGTTCTTATGGGGA +
Preference number: 5 (lower is better)
Translates to: STTHPLPNPGLFPMLWSAPWHSS*HGFLWG
Trigger: TCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGG...CGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CAA 90 bp GAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTCGGCCACAGCCTGACTaGCAACATTTTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: EGHECPWKCHKPQDVTLSRPQPD*QHFSPA
Trigger: AGCTGGAGAAAAATGTTGCAAGTCAGGCTGTGGCCG...AGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp ATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCGGTTCATGGTCAGTTTaGGGGGCAGGACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: MSAPGNVTSPRMSPSLDCGSWSV*GAGLVG
Trigger: TCCCACCAGTCCTGCCCCCAAAACTGACCATGAACC...GCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS CCA 90 bp CCTGTGGTGCAGCACTTCTGTTCAGCCGGACACAATTCATCACCCTaGCACAGCTCTTTGCATGGGTTCTTATGGGGAGGGCATTCTCCC +
Preference number: 5 (lower is better)
Translates to: PVVQHFCSAGHNSSP*HSSLHGFLWGGHSP
Trigger: GGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCCGGCTGAACAGAAGTGCTGCACCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
ENST00000465935.1
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
ENST00000493693.5
CDS CCA 90 bp AGGGCACCGGGATCTCTAATTCGGAATCAGACCTCACAGTCCAGTTaGGGTTCATGGTCAGTTTTGGGGGCAGGACTGGTGGGACACAGA +
Preference number: 5 (lower is better)
Translates to: RAPGSLIRNQTSQSS*GSWSVLGAGLVGHR
Trigger: TCTGTGTCCCACCAGTCCTGCCCCCAAAACTGACCATGAACCCCAACTGGACTGTGAGGTCTGATTCCGAATTAGAGATCCCGGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
ENST00000462017.5
ENST00000471401.5
ENST00000474942.5
ENST00000481847.5
ENST00000487343.5
ENST00000493693.5
CDS-3UTR CAA 90 bp CCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTATTTGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: PLSGKRSTTHPLPNPGLFGPPEL*DNHRPA
Trigger: GGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCC...AAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp AGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGCGGCCACAGCCTGACTaGCAACATTTTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SAPGNVTSPRMSPSLDCQRPQPD*QHFSPA
Trigger: AGCTGGAGAAAAATGTTGCAAGTCAGGCTGTGGCCG...CTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp CACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCGACCTCACAGTCCAGTaGGGGTTCATGGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: HHTPTTQSRAISHALVSGDLTVQ*GFMVSF
Trigger: AAAACTGACCATGAACCCCAACTGGACTGTGAGGTC...GCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp GAGGGCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTGACCTCACAGTCCAGTaGGGGTTCATGGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: EGHECPWKCHKPQDVTLSDLTVQ*GFMVSF
Trigger: AAAACTGACCATGAACCCCAACTGGACTGTGAGGTC...AGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp CACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCGGCGGCATTCTCCCTCTTTaGCATGTTCTCCTGCAGTTA +
Preference number: 5 (lower is better)
Translates to: HHTPTTQSRAISHALVSGGILPL*HVLLQL
Trigger: TAACTGCAGGAGAACATGCAAAAGAGGGAGAATGCC...GCCGCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CAA 90 bp AAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCCGGCCACAGCCTGACTaGCAACATTTTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: KHHTPTTQSRAISHALVSRPQPD*QHFSPA
Trigger: AGCTGGAGAAAAATGTTGCAAGTCAGGCTGTGGCCG...GCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp GAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCGGTTCATGGTCAGTTTaGGGGGCAGGACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: EMSQAPGCHPLLTARKSFGSWSV*GAGLVG
Trigger: TCCCACCAGTCCTGCCCCCAAAACTGACCATGAACC...GAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp GCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACGACCTCACAGTCCAGTaGGGGTTCATGGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: AMSAPGNVTSPRMSPSLDDLTVQ*GFMVSF
Trigger: AAAACTGACCATGAACCCCAACTGGACTGTGAGGTC...GTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
CDS-3UTR CAA 90 bp CACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCAGGGCTAGAGGTGTACACCTaGCCCAGAGTATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: HQPLSGKRSTTHPLPNPGLEVYT*PRVSAE
Trigger: CTCAGCTGATACTCTGGGCAAGGTGTACACCTCTAG...CCCTGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372630.2
ENST00000372632.6
CDS GCA 90 bp ATCCCAGAGGCAATGTCAGAGAGTATGCCCAGATTTTGCCCCTCATaGCAACATACCCTTAGGAATGTCTCGGCAGATCCGACCACAGCC +
Preference number: 5 (lower is better)
Translates to: IPEAMSESMPRFCPS*QHTLRNVSADPTTA
Trigger: GGCTGTGGTCGGATCTGCCGAGACATTCCTAAGGGTATGTTGGCATGAGGGGCAAAATCTGGGCATACTCTCTGACATTGCCTCTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465935.1
CDS-3UTR CAA 90 bp GCCATGAGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACGGCATTCTCCCTCTTTaGCATGTTCTCCTGCAGTTA +
Preference number: 5 (lower is better)
Translates to: AMSAPGNVTSPRMSPSLDGILPL*HVLLQL
Trigger: TAACTGCAGGAGAACATGCAAAAGAGGGAGAATGCC...GTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACTCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CAA 90 bp AGTGCCCCTGGAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGGCATTCTCCCTCTTTaGCATGTTCTCCTGCAGTTA +
Preference number: 5 (lower is better)
Translates to: SAPGNVTSPRMSPSLDCQGILPL*HVLLQL
Trigger: TAACTGCAGGAGAACATGCAAAAGAGGGAGAATGCC...CTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTCCAGGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS-3UTR CAA 90 bp AGAGGTCAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCGACCTCACAGTCCAGTaGGGGTTCATGGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: RGQHQPLSGKRSTTHPLPDLTVQ*GFMVSF
Trigger: AAAACTGACCATGAACCCCAACTGGACTGTGAGGTC...GGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337205.8
CDS GCA 90 bp ACTTCTGTTCAGCCGGACACAATTCATCACCCTGGCACAGCTCTTTaGATGGGTTCTTATGGGGAGGGCATTCTCCCTCTTTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: TSVQPDTIHHPGTAL*MGSYGEGILPLLKA
Trigger: GGCCTTCAAAAGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCCGGCTGAACAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000465935.1
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
ENST00000493693.5
CDS-3UTR CAA 90 bp GAAATGTCACAAGCCCCAGGATGTCACCCTCTCTTGACTGCCAGGAAAAGCTTCCTAGAGGTGTACACCTaGCCCAGAGTATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: EMSQAPGCHPLLTARKSFLEVYT*PRVSAE
Trigger: CTCAGCTGATACTCTGGGCAAGGTGTACACCTCTAG...GAAGCTTTTCCTGGCAGTCAAGAGAGGGTGACATCCTGGGGCTTGTGACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372630.2
ENST00000372632.6
CDS GCA 90 bp CTTCCATCTATCCCAGAGGCAATGTCAGAGAGTATGCCCAGATTTTaGCCCTCATGCCAACATACCCTTAGGAATGTCTCGGCAGATCCG +
Preference number: 5 (lower is better)
Translates to: LPSIPEAMSESMPRF*PSCQHTLRNVSADP
Trigger: CGGATCTGCCGAGACATTCCTAAGGGTATGTTGGCATGAGGGGCAAAATCTGGGCATACTCTCTGACATTGCCTCTGGGATAGATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465935.1
CDS GCA 90 bp ACTTCTGTTCAGCCGGACACAATTCATCACCCTGGCACAGCTCTTTaGATGGGTTCTTATGGGGAGGGCATTCTCCCTCTTTTGCATGTT +
Preference number: 5 (lower is better)
Translates to: TSVQPDTIHHPGTAL*MGSYGEGILPLLHV
Trigger: AACATGCAAAAGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCCGGCTGAACAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS CCA 90 bp GGACACAATTCATCACCCTGGCACAGCTCTTTGCATGGGTTCTTATaGGGAGGGCATTCTCCCTCTTTTGCATGTTCTCCTGCAGTTATC +
Preference number: 5 (lower is better)
Translates to: GHNSSPWHSSLHGFL*GGHSPSFACSPAVI
Trigger: GATAACTGCAGGAGAACATGCAAAAGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS CCA 90 bp AGAAGTACTCTAGGCAAGGGAGACTTCCAGAGGCAACCTAGAAGGTaGGAAGCTCTCTACTTCCATCTATCCCAGAGGCAATGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: RSTLGKGDFQRQPRR*EALYFHLSQRQCQR
Trigger: TCTCTGACATTGCCTCTGGGATAGATGGAAGTAGAGAGCTTCCCACCTTCTAGGTTGCCTCTGGAAGTCTCCCTTGCCTAGAGTACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465935.1
CDS CCA 90 bp GCTGTCTGCAACATCATGAAGCCTGAATGGGCTCACTTTTCTCTATaGCTCCTCATCTTGTCCATGCTTCTCCACACACCTTCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: AVCNIMKPEWAHFSL*LLILSMLLHTPSGN
Trigger: GTTCCCTGAAGGTGTGTGGAGAAGCATGGACAAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS-3UTR CAA 90 bp AAGCACCACACACCCACTACCCAATCCAGGGCTATTTCCCATGCTCTGGTCAGCCCTTTTCAAACAGGATaGTTTCCGAATAACCCTAGG +
Preference number: 5 (lower is better)
Translates to: KHHTPTTQSRAISHALVSPFQTG*FPNNPR
Trigger: CCTAGGGTTATTCGGAAACAATCCTGTTTGAAAAGG...GCTGACCAGAGCATGGGAAATAGCCCTGGATTGGGTAGTGGGTGTGTGGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS-3UTR CAA 90 bp CAGCACCAGCCTTTATCGGGAAAGAGAAGCACCACACACCCACTACCCAATCCACCTTTTCAAACAGGATaGTTTCCGAATAACCCTAGG +
Preference number: 5 (lower is better)
Translates to: QHQPLSGKRSTTHPLPNPPFQTG*FPNNPR
Trigger: CCTAGGGTTATTCGGAAACAATCCTGTTTGAAAAGG...TGGATTGGGTAGTGGGTGTGTGGTGCTTCTCTTTCCCGATAAAGGCTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243938.9
ENST00000337205.8
CDS TCA 90 bp CAAGTCCGGGATTCTTCTATCTGCTGTCTGCAACATCATGAAGCCTaGATGGGCTCACTTTTCTCTATGGCTCCTCATCTTGTCCATGCT +
Preference number: 5 (lower is better)
Translates to: QVRDSSICCLQHHEA*MGSLFSMAPHLVHA
Trigger: AGCATGGACAAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGCAGATAGAAGAATCCCGGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS GCA 90 bp GAAGCTCTCTACTTCCATCTATCCCAGAGGCAATGTCAGAGAGTATaGCCAGATTTTGCCCCTCATGCCAACATACCCTTAGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: EALYFHLSQRQCQRV*PDFAPHANIPLGMS
Trigger: AGACATTCCTAAGGGTATGTTGGCATGAGGGGCAAAATCTGGGCATACTCTCTGACATTGCCTCTGGGATAGATGGAAGTAGAGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465935.1
CDS GCA 90 bp AGCCTGAATGGGCTCACTTTTCTCTATGGCTCCTCATCTTGTCCATaGTTCTCCACACACCTTCAGGGAACATATTTCCTCCACAACTCA +
Preference number: 5 (lower is better)
Translates to: SLNGLTFLYGSSSCP*FSTHLQGTYFLHNS
Trigger: TGAGTTGTGGAGGAAATATGTTCCCTGAAGGTGTGTGGAGAAGCATGGACAAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS CCA 90 bp TCCGGGATTCTTCTATCTGCTGTCTGCAACATCATGAAGCCTGAATaGGCTCACTTTTCTCTATGGCTCCTCATCTTGTCCATGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SGILLSAVCNIMKPE*AHFSLWLLILSMLL
Trigger: GAGAAGCATGGACAAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGCAGATAGAAGAATCCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS TCA 90 bp TTTCAGTCAAGTCCGGGATTCTTCTATCTGCTGTCTGCAACATCATaGAGCCTGAATGGGCTCACTTTTCTCTATGGCTCCTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: FQSSPGFFYLLSATS*SLNGLTFLYGSSSC
Trigger: ACAAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGCAGATAGAAGAATCCCGGACTTGACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS GCA 90 bp CCTTCAGATATTTCAGTCAAGTCCGGGATTCTTCTATCTGCTGTCTaGAACATCATGAAGCCTGAATGGGCTCACTTTTCTCTATGGCTC +
Preference number: 5 (lower is better)
Translates to: PSDISVKSGILLSAV*NIMKPEWAHFSLWL
Trigger: GAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGCAGATAGAAGAATCCCGGACTTGACTGAAATATCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS GCA 72 bp CACCGCCCCGCCCTCCCTCAATGTCTCCGAGGCAGGTaGGGCCACAGCCGGTGCTGCAGCATTTATGCCCCT +
Preference number: 6 (lower is better)
Translates to: HRPALPQCLRGR*GHSRCCSIYAP
Trigger: AGGGGCATAAATGCTGCAGCACCGGCTGTGGCCGCACCTGCCTCGGAGACATTGAGGGAGGGCGGGGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
CDS GCA 72 bp CCTCAATGTCTCCGAGGCAGGTGCGGCCACAGCCGGTaGTGCAGCATTTATGCCCCTGGGGACAGGATGCAT +
Preference number: 6 (lower is better)
Translates to: PQCLRGRCGHSR*CSIYAPGDRMH
Trigger: ATGCATCCTGTCCCCAGGGGCATAAATGCTGCAGCACCGGCTGTGGCCGCACCTGCCTCGGAGACATTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
CDS CCA 72 bp GTGCGGCCACAGCCGGTGCTGCAGCATTTATGCCCCTaGGGACAGGATGCATCCCCATCACACAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: VRPQPVLQHLCP*GQDASPSHSSS
Trigger: TGAGGAGCTGTGTGATGGGGATGCATCCTGTCCCCAGGGGCATAAATGCTGCAGCACCGGCTGTGGCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
CDS CCA 72 bp CACACAGCCAACAATGCACAGGCCCACCAGAACTTTTaGACAATCACCGCCCCGCCCTCCCTCAATGTCTCC +
Preference number: 6 (lower is better)
Translates to: HTANNAQAHQNF*TITAPPSLNVS
Trigger: GGAGACATTGAGGGAGGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
CDS CAA 90 bp ATTCGGAATCAGACCTCACAGTCCAGTTGGGGTTCATGGTCAGTTTaGGGGGCAGGACTGGTGGGACACAGAAGCGGCCACAGCCTGACT +
Preference number: 6 (lower is better)
Translates to: IRNQTSQSSWGSWSV*GAGLVGHRSGHSLT
Trigger: AGTCAGGCTGTGGCCGCTTCTGTGTCCCACCAGTCCTGCCCCCAAAACTGACCATGAACCCCAACTGGACTGTGAGGTCTGATTCCGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
ENST00000462017.5
ENST00000467679.5
ENST00000471401.5
ENST00000474942.5
ENST00000481847.5
ENST00000487343.5
ENST00000493693.5
CDS CCA 72 bp CACACAGCCAACAATGCACAGGCCCACCAGAACTTTTaGACAATCACCGCCCCGCCCATGTTCTCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: HTANNAQAHQNF*TITAPPMFSCS
Trigger: ACTGCAGGAGAACATGGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372630.2
CDS CAA 72 bp TCACACAGCCAACAATGCACAGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCCCTCCCTCAATGTCTC +
Preference number: 6 (lower is better)
Translates to: SHSQQCTGPPEL*DNHRPALPQCL
Trigger: GAGACATTGAGGGAGGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
CDS CAA 72 bp TCACACAGCCAACAATGCACAGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCCCATGTTCTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SHSQQCTGPPEL*DNHRPAHVLLQ
Trigger: CTGCAGGAGAACATGGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372630.2
CDS CCA 72 bp CACACAGCCAACAATGCACAGGCCCACCAGAACTTTTaGACAATCACCGCCCCGCCAAGGCCTCTAAGTGTA +
Preference number: 6 (lower is better)
Translates to: HTANNAQAHQNF*TITAPPRPLSV
Trigger: TACACTTAGAGGCCTTGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471401.5
CDS CAA 72 bp TCACACAGCCAACAATGCACAGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCCCTCTACCCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: SHSQQCTGPPEL*DNHRPALYPFP
Trigger: TGGAAAAGGGTAGAGGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474942.5
CDS CAA 72 bp TCACACAGCCAACAATGCACAGGCCCACCAGAACTTTaGGACAATCACCGCCCCGCCAAGGCCTCTAAGTGT +
Preference number: 6 (lower is better)
Translates to: SHSQQCTGPPEL*DNHRPAKASKC
Trigger: ACACTTAGAGGCCTTGGCGGGGCGGTGATTGTCCAAAAGTTCTGGTGGGCCTGTGCATTGTTGGCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471401.5
CDS CCA 72 bp CAGCACTTCTGTTCAGCCGGACACAATTCATCACCCTaGCACAGCTCTTTGCATGGGTTCTTATGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: QHFCSAGHNSSP*HSSLHGFLWGG
Trigger: CCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCCGGCTGAACAGAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
ENST00000465935.1
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
ENST00000493693.5
CDS CCA 72 bp AAGTGGACATCTCTCGCCAGGGACCAGGTACCAGGGTaGGTGTCCTCTTCCAAAGAAGCTCCAGACAAATCA +
Preference number: 6 (lower is better)
Translates to: KWTSLARDQVPG*VSSSKEAPDKS
Trigger: TGATTTGTCTGGAGCTTCTTTGGAAGAGGACACCCACCCTGGTACCTGGTCCCTGGCGAGAGATGTCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS CAA 72 bp TCAGCCGGACACAATTCATCACCCTGGCACAGCTCTTaGCATGGGTTCTTATGGGGAGGGCATTCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: SAGHNSSPWHSS*HGFLWGGHSPS
Trigger: AGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCCGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
ENST00000465935.1
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
ENST00000493693.5
CDS CCA 72 bp GGATCTCTAATTCGGAATCAGACCTCACAGTCCAGTTaGGGTTCATGGTCAGTTTTGGGGGCAGGACTGGTG +
Preference number: 6 (lower is better)
Translates to: GSLIRNQTSQSS*GSWSVLGAGLV
Trigger: CACCAGTCCTGCCCCCAAAACTGACCATGAACCCCAACTGGACTGTGAGGTCTGATTCCGAATTAGAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372630.2
ENST00000372632.6
ENST00000462017.5
ENST00000471401.5
ENST00000474942.5
ENST00000481847.5
ENST00000487343.5
ENST00000493693.5
CDS CAA 90 bp CACTTCTGTTCAGCCGGACACAATTCATCACCCTGGCACAGCTCTTaGCATGGGTTCTTATGGGGAGGGCATTCTCCCTCTTTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: HFCSAGHNSSPWHSS*HGFLWGGHSPSFEG
Trigger: GCCTTCAAAAGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCCGGCTGAACAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000465935.1
ENST00000467679.5
ENST00000487343.5
ENST00000490877.1
ENST00000493693.5
CDS CAA 90 bp CACTTCTGTTCAGCCGGACACAATTCATCACCCTGGCACAGCTCTTaGCATGGGTTCTTATGGGGAGGGCATTCTCCCTCTTTTGCATGT +
Preference number: 6 (lower is better)
Translates to: HFCSAGHNSSPWHSS*HGFLWGGHSPSFAC
Trigger: ACATGCAAAAGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGAATTGTGTCCGGCTGAACAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS GCA 72 bp GCAATGTCAGAGAGTATGCCCAGATTTTGCCCCTCATaGCAACATACCCTTAGGAATGTCTCGGCAGATCCG +
Preference number: 6 (lower is better)
Translates to: AMSESMPRFCPS*QHTLRNVSADP
Trigger: CGGATCTGCCGAGACATTCCTAAGGGTATGTTGGCATGAGGGGCAAAATCTGGGCATACTCTCTGACATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465935.1
CDS CCA 72 bp TCATCACCCTGGCACAGCTCTTTGCATGGGTTCTTATaGGGAGGGCATTCTCCCTCTTTTGCATGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: SSPWHSSLHGFL*GGHSPSFACSP
Trigger: AGGAGAACATGCAAAAGAGGGAGAATGCCCTCCCCATAAGAACCCATGCAAAGAGCTGTGCCAGGGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243938.9
ENST00000337205.8
ENST00000372632.6
CDS GCA 72 bp ATCCCAGAGGCAATGTCAGAGAGTATGCCCAGATTTTaGCCCTCATGCCAACATACCCTTAGGAATGTCTCG +
Preference number: 6 (lower is better)
Translates to: IPEAMSESMPRF*PSCQHTLRNVS
Trigger: CGAGACATTCCTAAGGGTATGTTGGCATGAGGGGCAAAATCTGGGCATACTCTCTGACATTGCCTCTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465935.1
CDS TCA 72 bp AGTCCGGGATTCTTCTATCTGCTGTCTGCAACATCATaGAGCCTGAATGGGCTCACTTTTCTCTATGGCTCC +
Preference number: 6 (lower is better)
Translates to: SPGFFYLLSATS*SLNGLTFLYGS
Trigger: GGAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGCAGATAGAAGAATCCCGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS CAA 72 bp CCTGAATGGGCTCACTTTTCTCTATGGCTCCTCATCTaGTCCATGCTTCTCCACACACCTTCAGGGAACATA +
Preference number: 6 (lower is better)
Translates to: PEWAHFSLWLLI*SMLLHTPSGNI
Trigger: TATGTTCCCTGAAGGTGTGTGGAGAAGCATGGACAAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS CAA 90 bp ATCATGAAGCCTGAATGGGCTCACTTTTCTCTATGGCTCCTCATCTaGTCCATGCTTCTCCACACACCTTCAGGGAACATATTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: IMKPEWAHFSLWLLI*SMLLHTPSGNIFPP
Trigger: TGGAGGAAATATGTTCCCTGAAGGTGTGTGGAGAAGCATGGACAAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS GCA 72 bp TACTTCCATCTATCCCAGAGGCAATGTCAGAGAGTATaGCCAGATTTTGCCCCTCATGCCAACATACCCTTA +
Preference number: 6 (lower is better)
Translates to: YFHLSQRQCQRV*PDFAPHANIPL
Trigger: TAAGGGTATGTTGGCATGAGGGGCAAAATCTGGGCATACTCTCTGACATTGCCTCTGGGATAGATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465935.1
CDS TCA 72 bp GATTCTTCTATCTGCTGTCTGCAACATCATGAAGCCTaGATGGGCTCACTTTTCTCTATGGCTCCTCATCTT +
Preference number: 6 (lower is better)
Translates to: DSSICCLQHHEA*MGSLFSMAPHL
Trigger: AAGATGAGGAGCCATAGAGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGCAGATAGAAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS GCA 72 bp ATTTCAGTCAAGTCCGGGATTCTTCTATCTGCTGTCTaGAACATCATGAAGCCTGAATGGGCTCACTTTTCT +
Preference number: 6 (lower is better)
Translates to: ISVKSGILLSAV*NIMKPEWAHFS
Trigger: AGAAAAGTGAGCCCATTCAGGCTTCATGATGTTGCAGACAGCAGATAGAAGAATCCCGGACTTGACTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS CAA 90 bp AAAGCATTGGTAAGAATTTATTTACAACTGTTCATTATAGAGATGTaGATGTCCCGAGCAATAGTGGTCATGATCCCTAGATGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: KALVRIYLQLFIIEM*MSRAIVVMIPRCGG
Trigger: TCCTCCACATCTAGGGATCATGACCACTATTGCTCGGGACATCAACATCTCTATAATGAACAGTTGTAAATAAATTCTTACCAATGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS CAA 72 bp GTAAGAATTTATTTACAACTGTTCATTATAGAGATGTaGATGTCCCGAGCAATAGTGGTCATGATCCCTAGA +
Preference number: 6 (lower is better)
Translates to: VRIYLQLFIIEM*MSRAIVVMIPR
Trigger: TCTAGGGATCATGACCACTATTGCTCGGGACATCAACATCTCTATAATGAACAGTTGTAAATAAATTCTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481847.5
CDS TCA 72 bp TTTACTGTAACATTTACTGACGTTTACCTTGTGCCATaGACATCTTATTTGATCCTCACAATTATCCCCATT +
Preference number: 6 (lower is better)
Translates to: FTVTFTDVYLVP*TSYLILTIIPI
Trigger: AATGGGGATAATTGTGAGGATCAAATAAGATGTTCATGGCACAAGGTAAACGTCAGTAAATGTTACAGTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465935.1