Pregenerated sensors for WFDC13 (Homo sapiens)
Ensembl gene IDs: ENSG00000168634Ensembl transcript IDs: ENST00000305479.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCCACTGTGCCTGTCCTGGGTTCATGATATGGCCATGAAGCCTTaGAGGCTGGCCCCAAGGAGGTTGCCATGCAGTGTCTGGTTGATA | + |
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Preference number: 1 (lower is better) Translates to: PPLCLSWVHDMAMKP*RLAPRRLPCSVWLI Trigger: TATCAACCAGACACTGCATGGCAACCTCCTTGGGGCCAGCCTTCAAGGCTTCATGGCCATATCATGAACCCAGGACAGGCACAGTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR TCA 90 bp | TGGACTGGAACAGTGCTGCTTGTCTCTATGCCAAAGTGGGGTTTCTaGTTCCTCTCCTCATCCCAGGAGGAAACTGTGCTGAGCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: WTGTVLLVSMPKWGF*FLSSSQEETVLSFG Trigger: TCCAAAGCTCAGCACAGTTTCCTCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACTGTTCCAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGGAGGAAACTGTGCTGAGCTTTGGAAGGGGCTCTTGCAAGTGTTGACCTTGCAGGTTAGATATTaGGCCTCCAGTTTCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: IPGGNCAELWKGLLQVLTLQVRY*ASSFLL Trigger: AAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAA...GGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATCCAAAGTGGGGTTTCTaGTTCCTCTCCTCATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYPKWGF*FLSSSQ Trigger: CTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGG...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR-3UTR GCA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTCCAAGGAGGTTGCCATaGAGTGTCTGGTTGATATTT | + |
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Preference number: 2 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGPRRLP*SVWLIF Trigger: AAATATCAACCAGACACTGCATGGCAACCTCCTTGG...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATAACTCAAAAACGATTTaGAGGTTAGATATTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYNSKTI*RLDIGP Trigger: AGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTT...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR CAA 90 bp | GAGTTTTATGGTAGATTAGCCTTTATTGCCAAACTCAAAAACGATTaGCAGGTTAGATATTGGGCCTCCAGTTTCTTGCTTCTCAATACC | + |
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Preference number: 2 (lower is better) Translates to: EFYGRLAFIAKLKND*QVRYWASSFLLLNT Trigger: GGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAATAAAGGCTAATCTACCATAAAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR TCA 72 bp | CCCCACTGTGCCTGTCCTGGGTTCATGATATGGCCATaGAGCCTTGAAGGCTGGCCCCAAGGAGGTTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: PHCACPGFMIWP*SLEGWPQGGCH Trigger: ATGGCAACCTCCTTGGGGCCAGCCTTCAAGGCTTCATGGCCATATCATGAACCCAGGACAGGCACAGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR TCA 72 bp | ACAGTGCTGCTTGTCTCTATGCCAAAGTGGGGTTTCTaGTTCCTCTCCTCATCCCAGGAGGAAACTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: TVLLVSMPKWGF*FLSSSQEETVL Trigger: CAGCACAGTTTCCTCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR-3UTR CAA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTCTGGAACAGTGCTGCTaGTCTCTATGCCAAAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGLEQCC*SLCQSG Trigger: CCCACTTTGGCATAGAGACAAGCAGCACTGTTCCAG...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCTCTATGCCAAAGTGGGGTTTCTGATTCCTCTCCTCATCCCAGGAGGAAACAAACTCAAAAACGATTaGCAGGTTAGATATTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: CLYAKVGFLIPLLIPGGNKLKND*QVRYWA Trigger: GGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTT...GTTTCCTCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR CCA 72 bp | ATTGCCAAACTCAAAAACGATTTGCAGGTTAGATATTaGGCCTCCAGTTTCTTGCTTCTCAATACCTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: IAKLKNDLQVRY*ASSFLLLNTFL Trigger: TAGGAAGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | CTCTTAGTCACTGATCCAACTCTATCAGGTCCTCACCACCCCCACTGTGCCTGTAAGGGTTGCTGGGTTTaGCCAGGCACTGCTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLVTDPTLSGPHHPHCACKGCWV*PGTAVR Trigger: CCTCACAGCAGTGCCTGGTCAAACCCAGCAACCCTT...ACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR GCA 90 bp | CTCTTAGTCACTGATCCAACTCTATCAGGTCCTCACCACCCCCACTGTGCCTGTTCAGGTGGTGCTACATaGCGGGGGCAAGACCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLVTDPTLSGPHHPHCACSGGAT*RGQDLG Trigger: TCCAAGGTCTTGCCCCCGGCATGTAGCACCACCTGA...ACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGAGGAAACTGTGCTGAGCTTTGGAAGGGGCTCTTGCAAGTGTTGACCTTCTGGCTCAGGTGGTaGTACATGCCGGGGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: IPGGNCAELWKGLLQVLTFWLRW*YMPGAR Trigger: TCTTGCCCCCGGCATGTAGCACCACCTGAGCCAGAA...GGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | ATCCCAGGAGGAAACTGTGCTGAGCTTTGGAAGGGGCTCTTGCAAGTGTTGACCAGTTTCTGGCTCAGGTaGTGCTACATGCCGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IPGGNCAELWKGLLQVLTSFWLR*CYMPGA Trigger: TGCCCCCGGCATGTAGCACCACCTGAGCCAGAAACT...GGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | CTCTTAGTCACTGATCCAACTCTATCAGGTCCTCACCACCCCCACTGTGCCTGTACAGCATCCCTGGACTaGAACAGTGCTGCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LLVTDPTLSGPHHPHCACTASLD*NSAACL Trigger: GAGACAAGCAGCACTGTTCCAGTCCAGGGATGCTGT...ACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | TGTGGTAGGTCCTTAAGACCACCACCAGGGCACACACAGCATCCCTGGACTGGATGCATTGTACACAGGTaGGTACAGTTTTCAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: CGRSLRPPPGHTQHPWTGCIVHR*VQFSGA Trigger: AGCACCTGAAAACTGTACTCACCTGTGTACAATGCA...TCCAGTCCAGGGATGCTGTGTGTGCCCTGGTGGTGGTCTTAAGGACCTACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | TGTGGTAGGTCCTTAAGACCACCACCAGGGCACACACAGCATCCCTGGACTGGAAAGGAGGAACAGCACTaGAATCCTTTCTCGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: CGRSLRPPPGHTQHPWTGKEEQH*NPFSQS Trigger: AGATTGCGAGAAAGGATTTCAGTGCTGTTCCTCCTT...TCCAGTCCAGGGATGCTGTGTGTGCCCTGGTGGTGGTCTTAAGGACCTACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | ATCCCAGGAGGAAACTGTGCTGAGCTTTGGAAGGGGCTCTTGCAAGTGTTGACCCAGCCTCTTAGTCACTaGTCCAACTCTATCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IPGGNCAELWKGLLQVLTQPLSH*SNSIRS Trigger: GGACCTGATAGAGTTGGATCAGTGACTAAGAGGCTG...GGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | TGTCTCTATGCCAAAGTGGGGTTTCTGATTCCTCTCCTCATCCCAGGAGGAAACCCAAAGTGGGGTTTCTaGTTCCTCTCCTCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CLYAKVGFLIPLLIPGGNPKWGF*FLSSSQ Trigger: CTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGG...GTTTCCTCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | ATCCCAGGAGGAAACTGTGCTGAGCTTTGGAAGGGGCTCTTGCAAGTGTTGACCGGGTTGTCCAGATGTTaGTGTGGTAGGTCCTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: IPGGNCAELWKGLLQVLTGLSRC*CGRSLR Trigger: TCTTAAGGACCTACCACATCAACATCTGGACAACCC...GGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | CTCTTAGTCACTGATCCAACTCTATCAGGTCCTCACCACCCCCACTGTGCCTGTAGGCATGATGACTTCTaGGCCCTTGTGTTTGATTCT | + |
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Preference number: 4 (lower is better) Translates to: LLVTDPTLSGPHHPHCACRHDDF*ALVFDS Trigger: AGAATCAAACACAAGGGCTCAGAAGTCATCATGCCT...ACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR GCA 90 bp | TGTCTCTATGCCAAAGTGGGGTTTCTGATTCCTCTCCTCATCCCAGGAGGAAACCCTGGACTGGAACAGTaGTGCTTGTCTCTATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: CLYAKVGFLIPLLIPGGNPGLEQ*CLSLCQ Trigger: TTGGCATAGAGACAAGCAGCACTGTTCCAGTCCAGG...GTTTCCTCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | TGTCTCTATGCCAAAGTGGGGTTTCTGATTCCTCTCCTCATCCCAGGAGGAAACTGGGTGAGTAAGTTCTaGCCAAGGGTTGCTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: CLYAKVGFLIPLLIPGGNWVSKF*PRVAGF Trigger: AAACCCAGCAACCCTTGGCCAGAACTTACTCACCCA...GTTTCCTCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | AGTGCTGCTTGTCTCTATGCCAAAGTGGGGTTTCTGATTCCTCTCCTCATCCCAATGGTGTCAGTGGGATaGGTGAGTAAGTTCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SAACLYAKVGFLIPLLIPMVSVG*VSKFWP Trigger: TGGCCAGAACTTACTCACCCATCCCACTGACACCAT...TGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTTCAGAACACGCTGCTTaGGACTCCCAGGCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGSEHAA*DSQAPA Trigger: AGCTGGTGCCTGGGAGTCCCAAGCAGCGTGTTCTGA...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | ATTGCCAAACTCAAAAACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTTGATGGCCATGAAGCCTTaGAGGCTGGCCCCAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: IAKLKNDLQVRYWASSFLMAMKP*RLAPRR Trigger: CCTCCTTGGGGCCAGCCTTCAAGGCTTCATGGCCAT...CAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR GCA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTTACTTCAGAACACGCTaGTTGGGACTCCCAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGYFRTR*LGLPGT Trigger: GGTGCCTGGGAGTCCCAAGCAGCGTGTTCTGAAGTA...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | CTCTTAGTCACTGATCCAACTCTATCAGGTCCTCACCACCCCCACTGTGCCTGTTTGCAGGTTAGATATTaGGCCTCCAGTTTCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLVTDPTLSGPHHPHCACLQVRY*ASSFLL Trigger: AAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAA...ACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATTGTCAGTGGGATGGGTaGGTAAGTTCTGGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYCQWDG*VSSGQG Trigger: CCCTTGGCCAGAACTTACTCACCCATCCCACTGACA...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | ATCCCAGGAGGAAACTGTGCTGAGCTTTGGAAGGGGCTCTTGCAAGTGTTGACCATCGTAGAGGCAAAATaGTCTAGGAAATATGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IPGGNCAELWKGLLQVLTIVEAK*SRKYAS Trigger: TGAGGCATATTTCCTAGATCATTTTGCCTCTACGAT...GGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTAGGAGGAAACTGTGCTaGGCTTTGGAAGGGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGRRKLC*ALEGAL Trigger: AAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCT...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATCCTGTCCTGGGTTCATaGTATGGCCATGAAGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYPVLGS*YGHEAL Trigger: CAAGGCTTCATGGCCATATCATGAACCCAGGACAGG...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR GCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATGGTTTGACCAGGCACTaGTGTGAGGAGAAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYGLTRH*CEEKRR Trigger: CCTTCTCTTCTCCTCACAGCAGTGCCTGGTCAAACC...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTAACTGTGCTGAGCTTTaGAAGGGGCTCTTGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGNCAEL*KGLLQV Trigger: CACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTT...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | CTCTTAGTCACTGATCCAACTCTATCAGGTCCTCACCACCCCCACTGTGCCTGTTTGATTTTGATTTCATaGCACCTTATTGCAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LLVTDPTLSGPHHPHCACLILIS*HLIAAS Trigger: AGAGGCTGCAATAAGGTGCCATGAAATCAAAATCAA...ACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | AAAACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTTGCTTCTCAATACCTTTCATGATATGGCCATaGAGCCTTGAAGGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KTICRLDIGPPVSCFSIPFMIWP*SLEGWP Trigger: GGGCCAGCCTTCAAGGCTTCATGGCCATATCATGAA...AGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | ATTGCCAAACTCAAAAACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTTGGTCCTCTGCAGTTTCTaGCTCAGGTGGTGCTACATG | + |
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Preference number: 4 (lower is better) Translates to: IAKLKNDLQVRYWASSFLVLCSF*LRWCYM Trigger: CATGTAGCACCACCTGAGCCAGAAACTGCAGAGGAC...CAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR GCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATTTTCAGGTGCTGATATaGAGGGTGGAGGTTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYFQVLI*RVEVPR Trigger: TCTTGGAACCTCCACCCTGCATATCAGCACCTGAAA...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATCTGAGCCCTTGTGTTTaGTTCTGTTGCGCTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYLSPCV*FCCAFE Trigger: TTCAAAAGCGCAACAGAATCAAACACAAGGGCTCAG...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR GCA 90 bp | CCAAGGAGGTTGCCATGCAGTGTCTGGTTGATATTTCTCCTTGAGGTTAAATATCCAAGGAGGTTGCCATaGAGTGTCTGGTTGATATTT | + |
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Preference number: 4 (lower is better) Translates to: PRRLPCSVWLIFLLEVKYPRRLP*SVWLIF Trigger: AAATATCAACCAGACACTGCATGGCAACCTCCTTGG...ATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CCA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTTTGCCATGCAGTGTCTaGTTGATATTTCTCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGLPCSV*LIFLLE Trigger: CTCAAGGAGAAATATCAACCAGACACTGCATGGCAA...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR CAA 72 bp | AACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTaGCTTCTCAATACCTTCCTAAAGGTGGACCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: NDLQVRYWASSF*LLNTFLKVDQE Trigger: TTCTTGGTCCACCTTTAGGAAGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| 3UTR CAA 72 bp | GGTAGATTAGCCTTTATTGCCAAACTCAAAAACGATTaGCAGGTTAGATATTGGGCCTCCAGTTTCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GRLAFIAKLKND*QVRYWASSFLL Trigger: AAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAATAAAGGCTAATCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR TCA 90 bp | AAAACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTTGCTTCTCAATACCTATTCTGTTGCGCTTTTaGAATGTTTCTGATGAACAG | + |
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Preference number: 4 (lower is better) Translates to: KTICRLDIGPPVSCFSIPILLRF*NVSDEQ Trigger: CTGTTCATCAGAAACATTTCAAAAGCGCAACAGAAT...AGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | TGTGGTAGGTCCTTAAGACCACCACCAGGGCACACACAGCATCCCTGGACTGGACAAGGGTTGCTGGGTTaGACCAGGCACTGCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: CGRSLRPPPGHTQHPWTGQGLLG*TRHCCE Trigger: CTCACAGCAGTGCCTGGTCAAACCCAGCAACCCTTG...TCCAGTCCAGGGATGCTGTGTGTGCCCTGGTGGTGGTCTTAAGGACCTACCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | AGTGCTGCTTGTCTCTATGCCAAAGTGGGGTTTCTGATTCCTCTCCTCATCCCATTCAGAACACGCTGCTaGGGACTCCCAGGCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: SAACLYAKVGFLIPLLIPFRTRC*GLPGTS Trigger: GCTGGTGCCTGGGAGTCCCAAGCAGCGTGTTCTGAA...TGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | TGTGGTAGGTCCTTAAGACCACCACCAGGGCACACACAGCATCCCTGGACTGGAATGACTTCTGAGCCCTaGTGTTTGATTCTGTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: CGRSLRPPPGHTQHPWTGMTSEP*CLILLR Trigger: GCGCAACAGAATCAAACACAAGGGCTCAGAAGTCAT...TCCAGTCCAGGGATGCTGTGTGTGCCCTGGTGGTGGTCTTAAGGACCTACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | ATCCCAGGAGGAAACTGTGCTGAGCTTTGGAAGGGGCTCTTGCAAGTGTTGACCGGAAATATGCCTCAGTaGGCAGGCATGATGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: IPGGNCAELWKGLLQVLTGNMPQ*AGMMTS Trigger: AGAAGTCATCATGCCTGCCAACTGAGGCATATTTCC...GGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTCTGGCCCCAAGGAGGTaGCCATGCAGTGTCTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGLAPRR*PCSVWL Trigger: CAACCAGACACTGCATGGCAACCTCCTTGGGGCCAG...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTAGTTCTGGCCAAGGGTaGCTGGGTTTGACCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGSSGQG*LGLTRH Trigger: GTGCCTGGTCAAACCCAGCAACCCTTGGCCAGAACT...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | CTCTTAGTCACTGATCCAACTCTATCAGGTCCTCACCACCCCCACTGTGCCTGTGAGAGTTCTAGCCCTTaGATTTTGATTTCATGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LLVTDPTLSGPHHPHCACESSSP*ILISWH Trigger: GTGCCATGAAATCAAAATCAAAGGGCTAGAACTCTC...ACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTCGCAATCTTCCTGCATaGTACACAGGTGAGTACAGT | + |
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Preference number: 5 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGRNLPA*YTGEYS Trigger: ACTGTACTCACCTGTGTACAATGCAGGAAGATTGCG...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | ATTGCCAAACTCAAAAACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTTGCTGGAACAGTGCTGCTaGTCTCTATGCCAAAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: IAKLKNDLQVRYWASSFLLEQCC*SLCQSG Trigger: CCCACTTTGGCATAGAGACAAGCAGCACTGTTCCAG...CAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | GATTTCATGGCACCTTATTGCAGCCTCTTAGTCACTGATCCAACTCTATCAGGTCCATGCAGTGTCTGGTaGATATTTCTCCTTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: DFMAPYCSLLVTDPTLSGPCSVW*IFLLEV Trigger: AACCTCAAGGAGAAATATCAACCAGACACTGCATGG...ACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | AAAACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTTGCTTCTCAATACCTAAACTCAAAAACGATTaGCAGGTTAGATATTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: KTICRLDIGPPVSCFSIPKLKND*QVRYWA Trigger: GGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTT...AGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS-3UTR CAA 90 bp | AAAACGATTTGCAGGTTAGATATTGGGCCTCCAGTTTCTTGCTTCTCAATACCTTCTAGCCCTTTGATTTaGATTTCATGGCACCTTATT | + |
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Preference number: 5 (lower is better) Translates to: KTICRLDIGPPVSCFSIPSSPLI*ISWHLI Trigger: AATAAGGTGCCATGAAATCAAAATCAAAGGGCTAGA...AGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS CCA 72 bp | GGCTTCATGGTGTCAGTGGGATGGGTGAGTAAGTTCTaGCCAAGGGTTGCTGGGTTTGACCAGGCACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GFMVSVGWVSKF*PRVAGFDQALL Trigger: CAGCAGTGCCTGGTCAAACCCAGCAACCCTTGGCCAGAACTTACTCACCCATCCCACTGACACCATGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS TCA 72 bp | AATCCTTTCTCGCAATCTTCCTGCATTGTACACAGGTaGGTACAGTTTTCAGGTGCTGATATGCAGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: NPFSQSSCIVHR*VQFSGADMQGG Trigger: TCCACCCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTACAATGCAGGAAGATTGCGAGAAAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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| CDS TCA 72 bp | GATGAACAGACTATCCCACAGAAGGAGGAACAGCACTaGAATCCTTTCTCGCAATCTTCCTGCATTGTACAC | + |
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Preference number: 6 (lower is better) Translates to: DEQTIPQKEEQH*NPFSQSSCIVH Trigger: GTGTACAATGCAGGAAGATTGCGAGAAAGGATTTCAGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305479.3 |
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