RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WEE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000214102

Ensembl transcript IDs: ENST00000397541.6, ENST00000574659.5

Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGCAGCAGCTTGCTCCTaGTGTCTGGTTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHAAACS*CLVGLV
Trigger: CACCAGCCCAACCAGACAGCAGGAGCAAGCTGCTGC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTGGGGTGACTGGGCCTaGTGGGCTTCTCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHWGDWA*WASLSS
Trigger: GGAACTGAGAGAAGCCCAGCAGGCCCAGTCACCCCA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATACCATTGGTGGGCAATaGCTCTGCTCCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHTIGGQ*LCSCSH
Trigger: GTGGCTGCAGGAGCAGAGTCATTGCCCACCAATGGT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCAGAAGGGAACGCTGTaGACCTACAGAAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHQKGTL*TYRSRE
Trigger: CTCCCTGCTTCTGTAGGTTCACAGCGTTCCCTTCTG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATACCCCAGTGTCACCATaGTGGGTATATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHTPVSP*WVYPWG
Trigger: ACCCCAGGGATATACCCATCATGGTGACACTGGGGT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGCGGATATGGTGCCATaGAGCACCATTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHADMVP*STIGGQ
Trigger: TTGCCCACCAATGGTGCTGCATGGCACCATATCCGC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCCCTTGCGGATATGGTaGCATGCAGCACCATTGGTG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHPLRIW*HAAPLV
Trigger: CACCAATGGTGCTGCATGGCACCATATCCGCAAGGG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCACTTCACCCTTCTCTaGGGTTTGGCTCGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHHFTLL*GLARSL
Trigger: GAGGCTTCGAGCCAAACCCCAGAGAAGGGTGAAGTG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGCCATGCAGCACCATTaGTGGGCAATGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHAMQHH*WAMTLL
Trigger: GAGCAGAGTCATTGCCCACCAATGGTGCTGCATGGC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGATGTGTCGAGCTCATaGACGTTGCTAAGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHDVSSS*TLLRGV
Trigger: GACTCCCCTTAGCAACGTGCATGAGCTCGACACATC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCCGGAAAGTTACCCTTaGGGATATGGTGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHPESYP*GYGAMQ
Trigger: CTGCATGGCACCATATCCGCAAGGGTAACTTTCCGG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGTAAAACACATCTCTTaGCAGGCAGCCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHVKHIS*QAALPC
Trigger: GCAAGGGAGGGCTGCCTGCCAAGAGATGTGTTTTAC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATATGCAGCACCATTGGTaGGCAATGACTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHMQHHW*AMTLLL
Trigger: CAGGAGCAGAGTCATTGCCCACCAATGGTGCTGCAT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCCCTGGGATCTTTGGTaGGGAATCAGCAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHPWDLW*GISNSN
Trigger: GTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATAGTCCCTGGGATCTTTaGTGGGGAATCAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHSPWDL*WGISNS
Trigger: GCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTCGCGACGGTAGCCTaGATTTCCCTCTACCAACTA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHFATVA*ISLYQL
Trigger: TAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTGTACCCTTTGCCTCTaGATCCTGCACTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHCTLCL*ILHFTL
Trigger: AAGGGTGAAGTGCAGGATTCAGAGGCAAAGGGTACA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATACATCAAGTTTTCCCTaGAGCCTCTCCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHTSSFP*SLSPQH
Trigger: ATGCTGTGGGGAGAGGCTTCAGGGAAAACTTGATGT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATAGGAAGCTTCCCTGTTaGAGAAATCACCAACCGGCT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHRKLPC*RNHQPA
Trigger: AGCCGGTTGGTGATTTCTCCAACAGGGAAGCTTCCT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTACCCTTGCGGATATaGTGCCATGCAGCACCATTG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLPLRI*CHAAPL
Trigger: CAATGGTGCTGCATGGCACCATATCCGCAAGGGTAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGGAGAACTGTATTTCTaGCCAGAGCTGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHGELYF*PELLQK
Trigger: CTTCTGCAGCAGCTCTGGCCAGAAATACAGTTCTCC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTGTACAACGAGTCCCTaGGATCTTTGGTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHCTTSP*DLWWGI
Trigger: GATTCCCCACCAAAGATCCCAGGGACTCGTTGTACA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGGCAGGGCAAATAGATaGAGAACAACCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHGRANR*RTTTGT
Trigger: TGTGCCTGTGGTTGTTCTCCATCTATTTGCCCTGCC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGTCATCTTCTGCCCATaGGGAATAGTAACGTACCAC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHVIFCP*GIVTYH
Trigger: GTGGTACGTTACTATTCCTCATGGGCAGAAGATGAC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTTGGGTTTGTTTATTaGTGTTGCGTGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHFGFVY*CCVAQV
Trigger: GACCTGGGCCACGCAACATCAATAAACAAACCCAAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGAACTCTTCTGGATATaGCACATAGTCTCCCATGTG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHELFWI*HIVSHV
Trigger: CACATGGGAGACTATGTGTCATATCCAGAAGAGTTC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGAAAATAACTTAACCTaGAGGTTTCGCGACGGTAGC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHENNLT*RFRDGS
Trigger: GCTACCGTCGCGAAACCTGCAGGTTAAGTTATTTTC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTGTGAAGCTGAGACTTaGCACCAAGACCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHCEAET*HQDLLL
Trigger: TAGTAACAGGTCTTGGTGGCAAGTCTCAGCTTCACA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTGTTCGGCATCAGGTTaGATCATGTTCTTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHCSASG*IMFLSR
Trigger: TCTGCTCAAGAACATGATCCAACCTGATGCCGAACA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCTTCCTCAAAGAAGCTaGGAATTCTCTCTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLPQRS*EFSLRN
Trigger: GTTCCTAAGAGAGAATTCCCAGCTTCTTTGAGGAAG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATATCAAGAGAAATTGGTaGGACCCAGAATATCAAACC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHIKRNW*DPEYQT
Trigger: GGTTTGATATTCTGGGTCTCACCAATTTCTCTTGAT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTTTCTAGCAGATCCTaGCCATCATTAACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHFSSRS*PSLTVG
Trigger: TCCAACAGTTAATGATGGTCAGGATCTGCTAGAAAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCTCGGAGCAATTAAATaGAGTTCATGTACAGAACTC +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLGAIK*SSCTEL
Trigger: GAGTTCTGTACATGAACTGCATTTAATTGCTCCGAG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCATAGAGCGCTTTATTaGATAAACACATCCATCCAG +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHHRALY*INTSIQ
Trigger: CTGGATGGATGTGTTTATGCAATAAAGCGCTCTATG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATACCATCATTAACTGTTaGAACTGTGAAGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHTIINC*NCEAET
Trigger: AGTCTCAGCTTCACAGTTCCAACAGTTAATGATGGT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTGCAGTATTCATTCTaGATGATCATGTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLQYSF*MIMWSS
Trigger: AGATGACCACATGATCATTCAGAATGAATACTGCAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTTGGCTCTTCAAAATaGTTGCCAGACTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHFGSSK*LPDLVF
Trigger: AAACACTAAGTCTGGCAATCATTTTGAAGAGCCAAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTTCAACTTCTTCTATaGCTCCAGAGGATTCACTTT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHFQLLL*LQRIHF
Trigger: AAAGTGAATCCTCTGGAGTCATAGAAGAAGTTGAAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR TCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTTGCATTCACTAAGATaGCACAAACAGAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLHSLR*HKQSLS
Trigger: TGATAAGCTCTGTTTGTGTCATCTTAGTGAATGCAA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATACGGTGTTAATTTTCTaGCTTAAGTACCACCAATCT +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHTVLIF*LKYHQS
Trigger: AGATTGGTGGTACTTAAGGCAGAAAATTAACACCGT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR GCA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCTCTTATTTTCCTCTTaGCACCAGATTGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLLFSS*HQIEEI
Trigger: TATTTCTTCAATCTGGTGGCAAGAGGAAAATAAGAG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATACCCTTCTCTGGGGTTaGGCTCGAAGCCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHTLLWG*ARSLPA
Trigger: AGCAGGGAGGCTTCGAGCCAAACCCCAGAGAAGGGT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTCACTGGGCAGCAGCTaGCTCCTGCTGTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHSLGSS*LLLSGW
Trigger: CCAACCAGACAGCAGGAGCAAGCTGCTGCCCAGTGA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCGGCTCAGCATGGTTTaGGGAGTAGAGGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHRLSMV*GVEGLS
Trigger: TGACAGCCCCTCTACTCCCAAAACCATGCTGAGCCG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTCGAGCTCATGCACGTaGCTAAGGGGAGTCCAAGGT +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHSSSCT*LRGVQG
Trigger: ACCTTGGACTCCCCTTAGCAACGTGCATGAGCTCGA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCGTAAAACACATCTCTaGGCAGGCAGCCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHRKTHL*AGSPPL
Trigger: CAAGGGAGGGCTGCCTGCCAAGAGATGTGTTTTACG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTGCCATGCAGCACCATaGGTGGGCAATGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHCHAAP*VGNDSA
Trigger: AGCAGAGTCATTGCCCACCAATGGTGCTGCATGGCA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGGCGTTTTGTGCTTCTaGATCCTGTGTGGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHGVLCF*ILCGSQ
Trigger: CTGGGACCCACACAGGATCAAGAAGCACAAAACGCC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGAGTCCCTGGGATCTTaGGTGGGGAATCAGCAACAG +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHESLGS*VGNQQQ
Trigger: CTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATAAGGAAGCTTCCCTGTaGGAGAAATCACCAACCGGC +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHKEASL*EKSPTG
Trigger: GCCGGTTGGTGATTTCTCCAACAGGGAAGCTTCCTT...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTCCGGAAAGTTACCCTaGCGGATATGGTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHSGKLP*RIWCHA
Trigger: TGCATGGCACCATATCCGCAAGGGTAACTTTCCGGA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCTCCCACCAGGCGTTTaGTGCTTCTTGATCCTGTGT +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLPPGV*CFLILC
Trigger: ACACAGGATCAAGAAGCACAAAACGCCTGGTGGGAG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCTGTTCGGCATCAGGTaGGATCATGTTCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLFGIR*DHVLEQ
Trigger: CTGCTCAAGAACATGATCCAACCTGATGCCGAACAG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGTTTGTTTATTGATGTaGCGTGGCCCAGGTCACCAA +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHVCLLM*RGPGHQ
Trigger: TTGGTGACCTGGGCCACGCAACATCAATAAACAAAC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGTGCCGGTAATCCTCTaGCAAAATCTCATTAGCCAG +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHVPVIL*QNLISQ
Trigger: CTGGCTAATGAGATTTTGCAAGAGGATTACCGGCAC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATGGTTGGATCATGTTCTaGAGCAGACTGGAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHGWIMF*SRLEKL
Trigger: AAGCTTTTCCAGTCTGCTCAAGAACATGATCCAACC...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATCTCCCCACAGCATTTTaGTTCTGCAAGTTAACAACC +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHLPTAF*FCKLTT
Trigger: GGTTGTTAACTTGCAGAACAAAAATGCTGTGGGGAG...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS-3UTR CAA 90 bp ACGAGTCCCTGGGATCTTTGGTGGGGAATCAGCAACAGCAACCTCGTAATCCATTCTTCCACTTTGGGTTaGTTTATTGATGTTGCGTGG +
Preference number: 5 (lower is better)
Translates to: TSPWDLWWGISNSNLVIHSSTLG*FIDVAW
Trigger: CCACGCAACATCAATAAACAAACCCAAAGTGGAAGA...ATGGATTACGAGGTTGCTGTTGCTGATTCCCCACCAAAGATCCCAGGGACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS TCA 90 bp CTCGGAGCAATTAAATGCAGTTCATGTACAGAACTCTTCTGGATATaGCACATAGTCTCCCATGTGTTACCAAATACTAGTGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: LGAIKCSSCTELFWI*HIVSHVLPNTSEKI
Trigger: AATTTTCTCACTAGTATTTGGTAACACATGGGAGACTATGTGTCATATCCAGAAGAGTTCTGTACATGAACTGCATTTAATTGCTCCGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS CAA 72 bp AAGTTACCCTTGCGGATATGGTGCCATGCAGCACCATaGGTGGGCAATGACTCTGCTCCTGCAGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: KLPLRIWCHAAP*VGNDSAPAATA
Trigger: TGCAGTGGCTGCAGGAGCAGAGTCATTGCCCACCAATGGTGCTGCATGGCACCATATCCGCAAGGGTAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS CAA 90 bp ACGTCCGGAAAGTTACCCTTGCGGATATGGTGCCATGCAGCACCATaGGTGGGCAATGACTCTGCTCCTGCAGCCACTGCAATTGTTAAT +
Preference number: 6 (lower is better)
Translates to: TSGKLPLRIWCHAAP*VGNDSAPAATAIVN
Trigger: ATTAACAATTGCAGTGGCTGCAGGAGCAGAGTCATTGCCCACCAATGGTGCTGCATGGCACCATATCCGCAAGGGTAACTTTCCGGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS CAA 72 bp TTGTCTTTTTCCGAAGATGTGTCGAGCTCATGCACGTaGCTAAGGGGAGTCCAAGGTGGTGTACCCTTTGCC +
Preference number: 6 (lower is better)
Translates to: LSFSEDVSSSCT*LRGVQGGVPFA
Trigger: GGCAAAGGGTACACCACCTTGGACTCCCCTTAGCAACGTGCATGAGCTCGACACATCTTCGGAAAAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS GCA 72 bp CTTTCTTTGTCTTTTTCCGAAGATGTGTCGAGCTCATaGACGTTGCTAAGGGGAGTCCAAGGTGGTGTACCC +
Preference number: 6 (lower is better)
Translates to: LSLSFSEDVSSS*TLLRGVQGGVP
Trigger: GGGTACACCACCTTGGACTCCCCTTAGCAACGTGCATGAGCTCGACACATCTTCGGAAAAAGACAAAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5
CDS TCA 72 bp ATTAAATGCAGTTCATGTACAGAACTCTTCTGGATATaGCACATAGTCTCCCATGTGTTACCAAATACTAGT +
Preference number: 6 (lower is better)
Translates to: IKCSSCTELFWI*HIVSHVLPNTS
Trigger: ACTAGTATTTGGTAACACATGGGAGACTATGTGTCATATCCAGAAGAGTTCTGTACATGAACTGCATTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397541.6
ENST00000574659.5