RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR97 (Homo sapiens)

Ensembl gene IDs: ENSG00000179698

Ensembl transcript IDs: ENST00000323662.9, ENST00000525150.5, ENST00000528691.5, ENST00000529209.1, ENST00000533108.1, ENST00000534167.5

Found 969 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATaGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGCATGG +
Preference number: 1 (lower is better)
Translates to: KAAAPHAATAASASG*GRPGCGPHRAGTAW
Trigger: CCATGCGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGCCTT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp GCCTTCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTaGGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAG +
Preference number: 1 (lower is better)
Translates to: AFRRHCGFRPHAHTP*APRGPPKQAASCRK
Trigger: CTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGAAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp AGGCCACCAGTCCGGTCAGCTGTAGGTGTCAGGGTCCGCGTCCGCTaGCAGAAAGTAGCGCTGCAGGGCCGGCTGCAGGAGCCGCGGGGG +
Preference number: 1 (lower is better)
Translates to: RPPVRSAVGVRVRVR*QKVALQGRLQEPRG
Trigger: CCCCCGCGGCTCCTGCAGCCGGCCCTGCAGCGCTACTTTCTGCCAGCGGACGCGGACCCTGACACCTACAGCTGACCGGACTGGTGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp CTCAGTCTCATCGCGGACCTCGCGGACCTCTGCGGCTTGGCCTCCTaGAGCCGGAGGATGGGGTGGTACCAGTGCTCCCGCGGAGGTGGC +
Preference number: 1 (lower is better)
Translates to: LSLIADLADLCGLAS*SRRMGWYQCSRGGG
Trigger: GCCACCTCCGCGGGAGCACTGGTACCACCCCATCCTCCGGCTGCAGGAGGCCAAGCCGCAGAGGTCCGCGAGGTCCGCGATGAGACTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp AGGTGGCACCACCATGTCGGGCACCGGCGCCACCGTGTAGGGCTCTaGCGGGTGTGGGTGCGCAGCCTTCTCCTGGAGCGAACTCCGCTG +
Preference number: 1 (lower is better)
Translates to: RWHHHVGHRRHRVGL*RVWVRSLLLERTPL
Trigger: CAGCGGAGTTCGCTCCAGGAGAAGGCTGCGCACCCACACCCGCCAGAGCCCTACACGGTGGCGCCGGTGCCCGACATGGTGGTGCCACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp AGACCTGCGAGAGCCTCCCGAAGATGCCGGAGGCCGACCAGGAGGTaGCCGAGGGTATCACGGAGGCGCGTGTGGGTGCCCCAGAGACCA +
Preference number: 1 (lower is better)
Translates to: RPARASRRCRRPTRR*PRVSRRRVWVPQRP
Trigger: TGGTCTCTGGGGCACCCACACGCGCCTCCGTGATACCCTCGGGCACCTCCTGGTCGGCCTCCGGCATCTTCGGGAGGCTCTCGCAGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp AAGAAGTTGAGCGCGTCGATGGGGCCCAAGTCCAGCAGCTGCGAGTaGGACCAGTCGGTCTCCTCCAGCGGCGGCGGCTCTCCGGGCAGC +
Preference number: 1 (lower is better)
Translates to: KKLSASMGPKSSSCE*DQSVSSSGGGSPGS
Trigger: GCTGCCCGGAGAGCCGCCGCCGCTGGAGGAGACCGACTGGTCGCACTCGCAGCTGCTGGACTTGGGCCCCATCGACGCGCTCAACTTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp GTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTaGCCTAGGCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATG +
Preference number: 1 (lower is better)
Translates to: VCSVPSGWYPAMGLL*PRPATPPGTLVPTM
Trigger: CATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR TCA 90 bp AGGCAGAAGCTCTTCAGCGTCTCGGAGAGCACTCTGAGACGGAGCTaGGGGGTCCCCCAGCTGCGCTTGGGTGCCAGCATCCGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: RQKLFSVSESTLRRS*GVPQLRLGASIRWA
Trigger: GGCCCAGCGGATGCTGGCACCCAAGCGCAGCTGGGGGACCCCTCAGCTCCGTCTCAGAGTGCTCTCCGAGACGCTGAAGAGCTTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 90 bp GGAGCGAACTCCGCTGCTGCGCCCGCAGCTGCTCACAGAAGAAGTTaGGCGCGTCGATGGGGCCCAAGTCCAGCAGCTGCGAGTGCGACC +
Preference number: 1 (lower is better)
Translates to: GANSAAAPAAAHRRS*ARRWGPSPAAASAT
Trigger: GGTCGCACTCGCAGCTGCTGGACTTGGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp GCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATaGTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: AGPSNLAVPHGPAHP*SWDGGTTVSSTGLG
Trigger: TCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 90 bp ACATCCCGGGTCTCTCTCTCCACTCTGAGGGTCCCGGCACTCCACTaGTGGGACCCCCTTCCAGACTGCATGCCCAGCAGGCCAGAGCCG +
Preference number: 1 (lower is better)
Translates to: TSRVSLSTLRVPALH*WDPLPDCMPSRPEP
Trigger: CGGCTCTGGCCTGCTGGGCATGCAGTCTGGAAGGGGGTCCCAGCAGTGGAGTGCCGGGACCCTCAGAGTGGAGAGAGAGACCCGGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp CATGACGGTGCCAGGGATGAGGGTGGGTCCTGGCAACCTTGCAGCTaGGCCGCCGGGGCTCCTGGGTCCAGTCCACAGCACTCTGATCCT +
Preference number: 1 (lower is better)
Translates to: HDGARDEGGSWQPCS*AAGAPGSSPQHSDP
Trigger: AGGATCAGAGTGCTGTGGACTGGACCCAGGAGCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCCACCCTCATCCCTGGCACCGTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp AACTCCCATGACGGTGCCAGGGATGAGGGTGGGTCCTGGCAACCTTaGAGCTGCGCCGCCGGGGCTCCTGGGTCCAGTCCACAGCACTCT +
Preference number: 1 (lower is better)
Translates to: NSHDGARDEGGSWQP*SCAAGAPGSSPQHS
Trigger: AGAGTGCTGTGGACTGGACCCAGGAGCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCCACCCTCATCCCTGGCACCGTCATGGGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp TGCGGCTCCGCAGGTGAGACCACCATCAAAGGCACCTCTGAGACCTaGGAGAGCCTCCCGAAGATGCCGGAGGCCGACCAGGAGGTGCCC +
Preference number: 1 (lower is better)
Translates to: CGSAGETTIKGTSET*ESLPKMPEADQEVP
Trigger: GGGCACCTCCTGGTCGGCCTCCGGCATCTTCGGGAGGCTCTCGCAGGTCTCAGAGGTGCCTTTGATGGTGGTCTCACCTGCGGAGCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp TCACAGAAGAAGTTGAGCGCGTCGATGGGGCCCAAGTCCAGCAGCTaGGAGTGCGACCAGTCGGTCTCCTCCAGCGGCGGCGGCTCTCCG +
Preference number: 1 (lower is better)
Translates to: SQKKLSASMGPKSSS*ECDQSVSSSGGGSP
Trigger: CGGAGAGCCGCCGCCGCTGGAGGAGACCGACTGGTCGCACTCGCAGCTGCTGGACTTGGGCCCCATCGACGCGCTCAACTTCTTCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 90 bp ATGCCTTGCTGTGCACCCTACGGTGGGTGGGTGGGATCGGCACTGTaGCTCGGGGAGACTGGGAGAAGTGCTGGCCCAGGGCTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: MPCCAPYGGWVGSAL*LGETGRSAGPGLPG
Trigger: ACCTGGGAGCCCTGGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCACCGTAGGGTGCACAGCAAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp TGCGCAGCCTTCTCCTGGAGCGAACTCCGCTGCTGCGCCCGCAGCTaGTCACAGAAGAAGTTGAGCGCGTCGATGGGGCCCAAGTCCAGC +
Preference number: 1 (lower is better)
Translates to: CAAFSWSELRCCARS*SQKKLSASMGPKSS
Trigger: GCTGGACTTGGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCTCCAGGAGAAGGCTGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp TCTGGCGGGTGTGGGTGCGCAGCCTTCTCCTGGAGCGAACTCCGCTaGTGCGCCCGCAGCTGCTCACAGAAGAAGTTGAGCGCGTCGATG +
Preference number: 1 (lower is better)
Translates to: SGGCGCAAFSWSELR*CARSCSQKKLSASM
Trigger: CATCGACGCGCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCTCCAGGAGAAGGCTGCGCACCCACACCCGCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp GGCCAGAAGCTGGGATGCCTTGCTGTGCACCCTACGGTGGGTGGGTaGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCC +
Preference number: 1 (lower is better)
Translates to: GQKLGCLAVHPTVGG*DRHCDSGRLGEVLA
Trigger: GGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCACCGTAGGGTGCACAGCAAGGCATCCCAGCTTCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp GAGGAGCGGGCCAGAAGCTGGGATGCCTTGCTGTGCACCCTACGGTaGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAG +
Preference number: 1 (lower is better)
Translates to: EERARSWDALLCTLR*VGGIGTVTRGDWEK
Trigger: CTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCACCGTAGGGTGCACAGCAAGGCATCCCAGCTTCTGGCCCGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp CCATCCATTGGAGCAGCTTCCTCTGCCACTGGGTTTGGGATGGCCTaGGGCGCCACAACCACAGGGCATCCTGGCTTGCCCCTGGCTCCG +
Preference number: 1 (lower is better)
Translates to: PSIGAASSATGFGMA*GATTTGHPGLPLAP
Trigger: CGGAGCCAGGGGCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAGGAAGCTGCTCCAATGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp GGCAGGTTCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTaGGCACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCAC +
Preference number: 1 (lower is better)
Translates to: GRFSWAQQLGCPARS*APMLLGWWHHCVKH
Trigger: GTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGAACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 90 bp CCTGAAGCTCCTGGATCATGTCCTCCAGTTTCTGGTGGCAGCAAGTaGGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGGACCCAGG +
Preference number: 1 (lower is better)
Translates to: PEAPGSCPPVSGGSK*AGRPWSPGLGPGPR
Trigger: CCTGGGTCCAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAACTGGAGGACATGATCCAGGAGCTTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp TTGGGTGCCAGCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTaGGGCTCCGCAGGTGAGACCACCATCAAAGGCACCTCTGAGACC +
Preference number: 1 (lower is better)
Translates to: LGASIRWAWSSGAKE*GSAGETTIKGTSET
Trigger: GGTCTCAGAGGTGCCTTTGATGGTGGTCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGCTGGCACCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp CCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTaGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGC +
Preference number: 1 (lower is better)
Translates to: PSNLAVPHGPAHPCS*DGGTTVSSTGLGKS
Trigger: GCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp GGCTTCTCCCCCATCCATTGGAGCAGCTTCCTCTGCCACTGGGTTTaGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCC +
Preference number: 1 (lower is better)
Translates to: GFSPIHWSSFLCHWV*DGLGRHNHRASWLA
Trigger: GGCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAGGAAGCTGCTCCAATGGATGGGGGAGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp CAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATaGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: QLGCPARSCAPMLLG*WHHCVKHRPGKEQP
Trigger: TGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp TGGGCTGCAGTGCTGACCTCAGCCCGGGCAAGACAGTGGGCAGCTTaGGGTACAGCACACACATCCCGGGTCTCTCTCTCCACTCTGAGG +
Preference number: 1 (lower is better)
Translates to: WAAVLTSARARQWAA*GTAHTSRVSLSTLR
Trigger: CCTCAGAGTGGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGCTGAGGTCAGCACTGCAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp GGCACTGTTTGGGCTGCAGTGCTGACCTCAGCCCGGGCAAGACAGTaGGCAGCTTGGGGTACAGCACACACATCCCGGGTCTCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: GTVWAAVLTSARARQ*AAWGTAHTSRVSLS
Trigger: GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGCTGAGGTCAGCACTGCAGCCCAAACAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp GTGGGATCCTGCACTGCAAGTGGGAGGATGGCAGGTCCAGGGCCATaGTCGTCCTCCCTCGGAGCTGCTCCAACTGCAGCTGCAGATCCA +
Preference number: 1 (lower is better)
Translates to: VGSCTASGRMAGPGP*SSSLGAAPTAAADP
Trigger: TGGATCTGCAGCTGCAGTTGGAGCAGCTCCGAGGGAGGACGACCATGGCCCTGGACCTGCCATCCTCCCACTTGCAGTGCAGGATCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp TGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTaGACCCAGGTCATCATCTCCTTGAATAGGAAGCCCTCTGGGTCC +
Preference number: 1 (lower is better)
Translates to: WQQVRRPALESRSGP*TQVIISLNRKPSGS
Trigger: GGACCCAGAGGGCTTCCTATTCAAGGAGATGATGACCTGGGTCCAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp TCCAGCACCACATCCCGGGACTCCAGGGAGCAGGCCAGGAGCAGCTaGAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGGAGG +
Preference number: 1 (lower is better)
Translates to: SSTTSRDSREQARSS*SASITNFFCVWSWR
Trigger: CCTCCAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCCTGCTCCCTGGAGTCCCGGGATGTGGTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTaGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTT +
Preference number: 1 (lower is better)
Translates to: LGCPARSCAPMLLGW*HHCVKHRPGKEQPF
Trigger: AAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp CCCCTGGCTCCGCATTTAGCCACATCTGCTGTAGCACCGCGGAGTTaGGCACATAGCCGGGGAAGCAGATGGGCCTCAGGCAGTGCTTGT +
Preference number: 1 (lower is better)
Translates to: PLAPHLATSAVAPRS*AHSRGSRWASGSAC
Trigger: ACAAGCACTGCCTGAGGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGTGGCTAAATGCGGAGCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 90 bp TGGACCCAGGTCATCATCTCCTTGAATAGGAAGCCCTCTGGGTCCTaGAGGCCCAGCCCGTGCAGCAGCTTCTTGAGCTCTGGCCGGCAG +
Preference number: 1 (lower is better)
Translates to: WTQVIISLNRKPSGS*RPSPCSSFLSSGRQ
Trigger: CTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGGGCTGGGCCTTCAGGACCCAGAGGGCTTCCTATTCAAGGAGATGATGACCTGGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp CACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTaGAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGG +
Preference number: 1 (lower is better)
Translates to: HTPCAPRGPPKQAAS*RKKFSGLYSRCRPW
Trigger: CCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp GGGGGCTGGTCCAGGTTGAGCAAGTGTACGAGCAGGCCCTGCAGCTaGCCTTGGAGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGC +
Preference number: 1 (lower is better)
Translates to: GGWSRLSKCTSRPCS*PWRSLLMLGSSLSS
Trigger: GCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACACTTGCTCAACCTGGACCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp TCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTaGACACGGTCGACCCACGTGGTCTTCTCCAGCAGGGCCACCAAC +
Preference number: 1 (lower is better)
Translates to: SLLMLGSSLSSTCRM*TRSTHVVFSSRATN
Trigger: GTTGGTGGCCCTGCTGGAGAAGACCACGTGGGTCGACCGTGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp GTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTaGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGG +
Preference number: 1 (lower is better)
Translates to: VAPLCQAPAWERAAI*WPHNKSHRTVWGDR
Trigger: CCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTaGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCGC +
Preference number: 1 (lower is better)
Translates to: THALGMVAPLCQAPA*ERAAIWWPHNKSHR
Trigger: GCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp GTACGAGCAGGCCCTGCAGCTGGCCTTGGAGATCACTGCTCATGTTaGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACACGGTCGA +
Preference number: 1 (lower is better)
Translates to: VRAGPAAGLGDHCSC*AAVSVAPAGCAHGR
Trigger: TCGACCGTGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 90 bp ATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATaGCAGGCCCCAGAGCCAGGCGGGCTGAGGCCACCAGTCCGGTCA +
Preference number: 1 (lower is better)
Translates to: ILWTLFPMQALAKYQ*QAPEPGGLRPPVRS
Trigger: TGACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTGGGGCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp CACTATGGCGTCCAAGTCCTCCTTCGGCACCAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAGAGACAAGGCCTCGCTGCAAACAGG +
Preference number: 1 (lower is better)
Translates to: HYGVQVLLRHQVLRC*PPTMDERQGLAANR
Trigger: CCTGTTTGCAGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAGGACTTGGACGCCATAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp CCTTGGAGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTaGAGGATGTGCACACGGTCGACCCACGTGGTCTTCTCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: PWRSLLMLGSSLSST*RMCTRSTHVVFSSR
Trigger: CCTGCTGGAGAAGACCACGTGGGTCGACCGTGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 90 bp GCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTaGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGAA +
Preference number: 1 (lower is better)
Translates to: APLCQAPAWERAAIW*PHNKSHRTVWGDRE
Trigger: TTCCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp TGGTCCAGGTTGAGCAAGTGTACGAGCAGGCCCTGCAGCTGGCCTTaGAGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGC +
Preference number: 1 (lower is better)
Translates to: WSRLSKCTSRPCSWP*RSLLMLGSSLSSTC
Trigger: GCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACACTTGCTCAACCTGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 90 bp CCCGCATCTCAACACCTAGTACTTGAGCAGAAAACGTTTGCTCAGTaGCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGC +
Preference number: 1 (lower is better)
Translates to: PASQHLVLEQKTFAQ*PADGTPLWVSSALG
Trigger: GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCTCAAGTACTAGGTGTTGAGATGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR TCA 90 bp TCTTTCTGTGTCCTGACCAAAAATCAGAGGGCCTTGGCCACTCTGTaGCCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAAC +
Preference number: 1 (lower is better)
Translates to: SFCVLTKNQRALATL*PSSCRTVPAGLNPN
Trigger: GTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTCAGGACACAGAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR TCA 90 bp AGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCTAGTACTTaGGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCT +
Preference number: 1 (lower is better)
Translates to: RTRSLRSARISTPST*AENVCSVPSGWYPA
Trigger: AGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCTCAAGTACTAGGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp CTCTTTGCCAGAATAAAAGTAACGAAAGCAAGGTCTGCAAACTCCTaGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGCCC +
Preference number: 1 (lower is better)
Translates to: LFARIKVTKARSANS*SHLHRPGRLILGPP
Trigger: GGGCGGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGACCTTGCTTTCGTTACTTTTATTCTGGCAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 90 bp CCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGAAGGTGTaGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAA +
Preference number: 1 (lower is better)
Translates to: PITRATAQFGVTGKV*RSDSNQSHQEETSK
Trigger: TTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACACCTTCCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 90 bp GTCAATTCTTCTCTTTGCCAGAATAAAAGTAACGAAAGCAAGGTCTaGAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCT +
Preference number: 1 (lower is better)
Translates to: VNSSLCQNKSNESKV*KLLVSPASTRKAHP
Trigger: AGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGACCTTGCTTTCGTTACTTTTATTCTGGCAAAGAGAAGAATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCCTCCGGGAACGCTGGTaGCCACGATGGCCACCTCCG +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPALRERW*PRWPPP
Trigger: CGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAG...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR TCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTGCCCCAGAGACCACTaGCGTCTGCGATGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPACPRDH*RLRWGL
Trigger: GAGACCCCATCGCAGACGTCAGTGGTCTCTGGGGCA...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGACAGGTCTTGCGCCCTaGCAGGCCACACAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPTGLAP*QATQGR
Trigger: TCTGCCCTGTGTGGCCTGGCAGGGCGCAAGACCTGT...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGCGCACCCATGCTCTTaGGATGGTGGCACCACTGTG +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPAAHPCS*DGGTTV
Trigger: CACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCGTTGCCCTCCGACGATaGATGAGAGACAAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAVALRR*MRDKAS
Trigger: CGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAAC...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGTCCTCCAGTTTCTGGTaGCAGCAAGTGCGCAGGCCG +
Preference number: 2 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPSSSFW*QQVRRP
Trigger: CGGCCTGCGCACTTGCTGCCACCAGAAACTGGAGGA...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGAAGCCTTCCTGGCGCTaGTGCCAGGAGGGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: EARPSIVPASGYACRLKMKPSWR*CQEGGG
Trigger: GCCCCCACCCTCCTGGCAGCAGCGCCAGGAAGGCTT...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCAGCATCCGCTGGGCCTaGAGCTCCGGGGCTAAAGAG +
Preference number: 2 (lower is better)
Translates to: GTLVPTMATSARPPAPAFSIRWA*SSGAKE
Trigger: CTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGCT...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTGCTTCAGCGTCCGGATaGGGCCGTCCAGGGTGCGGC +
Preference number: 2 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSASASG*GRPGCG
Trigger: GCCGCACCCTGGACGGCCCCATCCGGACGCTGAAGC...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCAGCACCTGCAGGATGTaGACACGGTCGACCCACGTG +
Preference number: 2 (lower is better)
Translates to: GTLVPTMATSARPPAPAFSTCRM*TRSTHV
Trigger: CACGTGGGTCGACCGTGTGCACATCCTGCAGGTGCT...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCAGTCTCAGTAGCACCTaGAGGATGTGCACACGGTCG +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPASLSST*RMCTRS
Trigger: CGACCGTGTGCACATCCTGCAGGTGCTACTGAGACT...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGCCAGCTGCGCTTGGGTaGCAGCATCCGCTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGPAALG*QHPLGL
Trigger: CAGGCCCAGCGGATGCTGGCACCCAAGCGCAGCTGG...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCTTCCGCCGCCACTGTaGGTTCAGGCCGCACGCCCA +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHLPPPL*VQAARP
Trigger: TGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGAAG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATCCCCTCCGGGAACGCTaGTGCCCACGATGGCCACCT +
Preference number: 2 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDPLRER*CPRWPP
Trigger: AGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGG...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCCCCCTCCGGGAACGCTaGTGCCCACGATGGCCACCT +
Preference number: 2 (lower is better)
Translates to: PLGLGWPGAPQPQGILACPLRER*CPRWPP
Trigger: AGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGG...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGAGGTCTGCAAACTCCTaGTCTCACCTGCATCGACCC +
Preference number: 2 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPRSANS*SHLHRP
Trigger: GGGTCGATGCAGGTGAGACCAGGAGTTTGCAGACCT...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTGTCAAGCACCGGCCTaGGAAAGAGCAGCCATTTGG +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPACQAPA*ERAAIW
Trigger: CCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACA...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCAGACAGTGGGCAGCTTaGGGTACAGCACACACATCC +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPARQWAA*GTAHTS
Trigger: GGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCT...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCACAGGAATCCAGCTGCTaGTTGGAGTGCGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: AAAPHAATAASASGWGRPQESSC*LECGLR
Trigger: CCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTG...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCACTTGGAGTCCAGGTCTaGGCCCTGGACCCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: AAAPHAATAASASGWGRPLGVQV*ALDPGH
Trigger: ATGACCTGGGTCCAGGGCCCAGACCTGGACTCCAAG...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGTGCGCAGGCCGGCCTTaGAGTCCAGGTCTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGCAGRP*SPGLGP
Trigger: AGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCA...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACTCCCCCAGCTGCGCTTaGGTGCCAGCATCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHSPSCA*VPASAG
Trigger: CCCAGCGGATGCTGGCACCCAAGCGCAGCTGGGGGA...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGTGTCCCGCACGGTCCTaGGCACCCATGCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: EARPSIVPASGYACRLKMCPARS*APMLLG
Trigger: TCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACA...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGCCCTTCCAGACTGCATaGCCAGCAGGCCAGAGCCGT +
Preference number: 2 (lower is better)
Translates to: EARPSIVPASGYACRLKMPFQTA*PAGQSR
Trigger: ACGGCTCTGGCCTGCTGGGCATGCAGTCTGGAAGGG...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGAGGCCGACCAGGAGGTaGCCGAGGGTATCACGGAGG +
Preference number: 2 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGRPTRR*PRVSRR
Trigger: CCTCCGTGATACCCTCGGGCACCTCCTGGTCGGCCT...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCCGCTGGTGCCCACGATaGCCACCTCCGCCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: FAQCPADGTPLWVSSALGRWCPR*PPPPGL
Trigger: GAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCG...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCTGGGCCCAGCAACTTaGCTGTCCCGCACGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHLGPAT*LSRTVL
Trigger: CAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGAGGCTGTAGTGCAGTaGTGTGATCTCTGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPAEAVVQ*CDLCLL
Trigger: CAGCAAGCAGAGATCACACCACTGCACTACAGCCTC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCAGGTGGGATGCTGGGTaGCATGCCAGTGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVRWDAG*HASGLG
Trigger: CCCCAGCCCACTGGCATGCCACCCAGCATCCCACCT...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCGGCTCCCAGGTCCTGTaGGGACAGGGCTGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: PLGLGWPGAPQPQGILACGSQVL*GQGCWH
Trigger: GTGCCAACAGCCCTGTCCCCACAGGACCTGGGAGCC...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCCTCATCGCACACCTGTaGACCTTGGCCTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GTLVPTMATSARPPAPAFLIAHL*TLAFCS
Trigger: ACTGCAGAAGGCCAAGGTTCACAGGTGTGCGATGAG...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR TCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCGTGGGATCGGCACTGTaGCTCGGGGAGACTGGGAGA +
Preference number: 2 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVVGSAL*LGETGR
Trigger: TCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCAC...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACGGGGCTGGTCCAGGTTaGGCAAGTGTACGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHGAGPG*ASVRAG
Trigger: GCCTGCTCGTACACTTGCTCAACCTGGACCAGCCCC...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCAAAACGTTTGCTCAGTaGCCAGCGGATGGTACCCCG +
Preference number: 2 (lower is better)
Translates to: GTLVPTMATSARPPAPAFKTFAQ*PADGTP
Trigger: CGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTT...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACACAGGTCTTGCGCCCTaGCAGGCCACACAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHTGLAP*QATQGR
Trigger: TCTGCCCTGTGTGGCCTGGCAGGGCGCAAGACCTGT...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACTGTCCCGCACGGTCCTaGGCACCCATGCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHCPARS*APMLLG
Trigger: TCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACA...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCGACCCCCTTCCAGACTaGATGCCCAGCAGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: SSCWLECGLREAKAQSSSDPLPD*MPSRPE
Trigger: CTCTGGCCTGCTGGGCATGCAGTCTGGAAGGGGGTC...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CAAATACCAATGACAGGCCCCAGAGCCAGGCGGGCTGAGGCCACCAGTCCGGTCTCTGGCGGGTGTGGGTaGGCAGCCTTCTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: QIPMTGPRARRAEATSPVSGGCG*AAFSWS
Trigger: GCTCCAGGAGAAGGCTGCGCACCCACACCCGCCAGA...GACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTGGGGCCTGTCATTGGTATTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGTCAAGCACCGGCCTaGGAAAGAGCAGCCATTTGG +
Preference number: 2 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGCQAPA*ERAAIW
Trigger: CCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACA...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGCACAGGTGGGATGCTaGGTGGCATGCCAGTGGGCT +
Preference number: 2 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDAQVGC*VACQWA
Trigger: AGCCCACTGGCATGCCACCCAGCATCCCACCTGTGC...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGAGGGACAGGCACAGGTaGGATGCTGGGTGGCATGCC +
Preference number: 2 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGRDRHR*DAGWHA
Trigger: GGCATGCCACCCAGCATCCCACCTGTGCCTGTCCCT...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGTGACTCGGGGAGACTaGGAGAAGTGCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDVTRGD*EKCWPR
Trigger: CCTGGGCCAGCACTTCTCCCAGTCTCCCCGAGTCAC...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCGTAGCACCGCGGAGTTaGGCACATAGCCGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVVAPRS*AHSRGS
Trigger: GCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTAC...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCTCTCTCTCTCCACTCTaGGGGTCCCGGCACTCCACT +
Preference number: 2 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPSLSPL*GSRHST
Trigger: AGTGGAGTGCCGGGACCCTCAGAGTGGAGAGAGAGA...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACGCTCACAGAAGAAGTTaGGCGCGTCGATGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHAHRRS*ARRWGP
Trigger: TGGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGC...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGAAGCAGGCGGCATCCTaGAGAAAGAAATTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPKQAAS*RKKFSG
Trigger: TCCAGAGAATTTCTTTCTGCAGGATGCCGCCTGCTT...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCAACGAAAGCAAGGTCTaGAAACTCCTGGTCTCACCT +
Preference number: 2 (lower is better)
Translates to: PGTLVPTMATSARPPAPANESKV*KLLVSP
Trigger: AGGTGAGACCAGGAGTTTGCAGACCTTGCTTTCGTT...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCGGCCAGAAGCTGGGATaGCTTGCTGTGCACCCTACG +
Preference number: 2 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVGQKLG*LAVHPT
Trigger: CGTAGGGTGCACAGCAAGGCATCCCAGCTTCTGGCC...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGTCCTCCCTCGGAGCTaGTCCAACTGCAGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGVLPRS*SNCSCR
Trigger: TCTGCAGCTGCAGTTGGAGCAGCTCCGAGGGAGGAC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCCGCACAGTTTGGGGTaGCAGGGAAGGTGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSPHSLG*QGRCGE
Trigger: TTCTCCACACCTTCCCTGTCACCCCAAACTGTGCGG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR TCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCAAGGTCATCATCTCCTTaGATAGGAAGCCCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: AAAPHAATAASASGWGRPRSSSP*IGSPLG
Trigger: ACCCAGAGGGCTTCCTATTCAAGGAGATGATGACCT...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACGAGACAAGGCCTCGCTaGAAACAGGGACAGGCACAG +
Preference number: 2 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHETRPR*KQGQAQ
Trigger: CTGTGCCTGTCCCTGTTTGCAGCGAGGCCTTGTCTC...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CCAGGAATCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCTGGCACTGTTTGGGCTaGAGTGCTGACCTCAGCCCG +
Preference number: 2 (lower is better)
Translates to: PGIQLLVGVRAQGSQGPVWHCLG*SADLSP
Trigger: CGGGCTGAGGTCAGCACTGCAGCCCAAACAGTGCCA...GACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGTGCTCCAACTGCAGCTaGAGATCCAGACTGATGCCC +
Preference number: 2 (lower is better)
Translates to: EARPSIVPASGYACRLKMCSNCS*RSRLMP
Trigger: GGGCATCAGTCTGGATCTGCAGCTGCAGTTGGAGCA...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGCGGAGCTGCTCCAACTaGAGCTGCAGATCCAGACTG +
Preference number: 2 (lower is better)
Translates to: FLVAASAQAGLGVQVWALRSCSN*SCRSRL
Trigger: CAGTCTGGATCTGCAGCTGCAGTTGGAGCAGCTCCG...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCGCTGGTGCCCACGATaGCCACCTCCGCCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPRWCPR*PPPPGL
Trigger: GAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCG...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCCTTGGCCTTCTGCAGTaGGAGGATGCGGTAGTGCCT +
Preference number: 2 (lower is better)
Translates to: SSCWLECGLREAKAQSSSLGLLQ*EDAVVP
Trigger: AGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CAA 90 bp TTGGGCTGCAGTGCTGACCTCAGCCCGGGCAAGACAGTGGGCAGCTaGGGGTACAGCACACACATCCCGGGTCTCTCTCTCCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: LGCSADLSPGKTVGS*GYSTHIPGLSLHSE
Trigger: CTCAGAGTGGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGCTGAGGTCAGCACTGCAGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGCAGTCCACAGCACTCTaGTCCTCCAGTTCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: FLVAASAQAGLGVQVWALQSTAL*SSSSQE
Trigger: TTCCTGGGAACTGGAGGATCAGAGTGCTGTGGACTG...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCCAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAG +
Preference number: 2 (lower is better)
Translates to: SSCWLECGLREAKAQSSSQVLRC*PPTMDE
Trigger: CTCATCCATCGTCGGAGGGCAACATCTCAGCACCTG...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCACACCAGGCTGTGGGCTaGCCCAGGACACGTTCTCTA +
Preference number: 2 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPHQAVG*PRTRSL
Trigger: TAGAGAACGTGTCCTGGGCCAGCCCACAGCCTGGTG...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTGAGCGGGCCAGAAGCTaGGATGCCTTGCTGTGCACC +
Preference number: 2 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGERARS*DALLCT
Trigger: GGTGCACAGCAAGGCATCCCAGCTTCTGGCCCGCTC...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCAACTCCTGGTCTCACCTaGATCGACCCGGAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPTPGLT*IDPEGS
Trigger: TGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGT...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCCAGGAGCAGCTGCAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGCAGGCACAGGTGGGATaGTGGGTGGCATGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GQEQLQRQYHELLLCLVLQAQVG*WVACQW
Trigger: CCACTGGCATGCCACCCAGCATCCCACCTGTGCCTG...CAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCAGTGGGATCCTGCACTaGAAGTGGGAGGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWASGILH*KWEDGR
Trigger: CCTGCCATCCTCCCACTTGCAGTGCAGGATCCCACT...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTCCGGGGCTAAAGAGTaGGGCTCCGCAGGTGAGACC +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHSGAKE*GSAGET
Trigger: GGTCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTGATGGTACCCCGCTATaGGTCTCCTCTGCCCTAGGC +
Preference number: 2 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGDGTPL*VSSALG
Trigger: GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATC...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGATGGTACCCCGCTATaGGTCTCCTCTGCCCTAGGC +
Preference number: 2 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTDGTPL*VSSALG
Trigger: GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CAAATACCAATGACAGGCCCCAGAGCCAGGCGGGCTGAGGCCACCAGTCCGGTCCCCATGCTCTTGGGATaGTGGCACCACTGTGTCAAG +
Preference number: 2 (lower is better)
Translates to: QIPMTGPRARRAEATSPVPMLLG*WHHCVK
Trigger: CTTGACACAGTGGTGCCACCATCCCAAGAGCATGGG...GACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTGGGGCCTGTCATTGGTATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGGCCCGGGCAAGACAGTaGGCAGCTTGGGGTACAGCA +
Preference number: 2 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQARARQ*AAWGTA
Trigger: TGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGC...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCTGTGCACCCTACGGTaGGTGGGTGGGATCGGCACT +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHLCTLR*VGGIGT
Trigger: AGTGCCGATCCCACCCACCCACCGTAGGGTGCACAG...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CAA 90 bp TGTACGAGCAGGCCCTGCAGCTGGCCTTGGAGATCACTGCTCATGTaGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACACGGTCG +
Preference number: 2 (lower is better)
Translates to: CTSRPCSWPWRSLLM*GSSLSSTCRMCTRS
Trigger: CGACCGTGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCAGGTAGTGGCTCAGTaGGGAGCGGGCCAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCQVVAQ*GAGQKL
Trigger: CAGCTTCTGGCCCGCTCCTCACTGAGCCACTACCTG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCATCAAAGGCACCTCTaGGACCTGCGAGAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHHQRHL*DLREPP
Trigger: GGGAGGCTCTCGCAGGTCTCAGAGGTGCCTTTGATG...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCAAAAACGTTTGCTCAGTaGCCAGCGGATGGTACCCCG +
Preference number: 2 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPKTFAQ*PADGTP
Trigger: CGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTT...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCAAAGGGGTCAGAGGATaGTCTGCGTTGCCGCTCAGA +
Preference number: 2 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWAKGVRG*SALPLR
Trigger: TCTGAGCGGCAACGCAGAGCATCCTCTGACCCCTTT...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCCTTCCTGGCGCTGCTaGCAGGAGGGTGGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GGILQKEILWTLFPMQALPSWRC*QEGGGW
Trigger: CCAGCCCCCACCCTCCTGGCAGCAGCGCCAGGAAGG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCACCAGGCTGTGGGCTaGCCCAGGACACGTTCTCTA +
Preference number: 2 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQHQAVG*PRTRSL
Trigger: TAGAGAACGTGTCCTGGGCCAGCCCACAGCCTGGTG...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR TCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACAGGCAGAGGTTGCAGTaGGCCGAGATCACGCCATTG +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHRQRLQ*AEITPL
Trigger: CAATGGCGTGATCTCGGCTCACTGCAACCTCTGCCT...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp CAAATACCAATGACAGGCCCCAGAGCCAGGCGGGCTGAGGCCACCAGTCCGGTCGGACTTTATTCCCGATaGAGGCCTTGGCCAAATACC +
Preference number: 2 (lower is better)
Translates to: QIPMTGPRARRAEATSPVGLYSR*RPWPNT
Trigger: GGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCC...GACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTGGGGCCTGTCATTGGTATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGACTCCTGGTCTCACCTaGATCGACCCGGAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: QPFGGPITRATAQFGVTGTPGLT*IDPEGS
Trigger: TGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGT...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTTCAGTGCCCAGCGGATaGTACCCCGCTATGGGTCTC +
Preference number: 2 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCSVPSG*YPAMGL
Trigger: GAGACCCATAGCGGGGTACCATCCGCTGGGCACTGA...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTTGTCAAAGCCTTCCTaGCGCTGCTGCCAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHLSKPS*RCCQEG
Trigger: ACCCTCCTGGCAGCAGCGCCAGGAAGGCTTTGACAA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGTGGGGACAGGGCTGTTaGCACTGTTTGGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: QPFGGPITRATAQFGVTGWGQGC*HCLGCS
Trigger: ACTGCAGCCCAAACAGTGCCAACAGCCCTGTCCCCA...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACACTCTGCCACTGGGTTTaGGATGGCCTGGGGCGCCAC +
Preference number: 2 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTLCHWV*DGLGRH
Trigger: GTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAG...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCGCCGCCGGGGCTCCTaGGTCCAGTCCACAGCACTC +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLRRRGS*VQSTAL
Trigger: GAGTGCTGTGGACTGGACCCAGGAGCCCCGGCGGCG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCCGCACAGTTTGGGGTaGCAGGGAAGGTGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCPHSLG*QGRCGE
Trigger: TTCTCCACACCTTCCCTGTCACCCCAAACTGTGCGG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTAGCCACCGCACAGTTTaGGGTGACAGGGAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCSHRTV*GDREGV
Trigger: CACACCTTCCCTGTCACCCCAAACTGTGCGGTGGCT...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACAGGCTGGGGCAGAGGCTaGGACAAGGACCAACCCCAA +
Preference number: 2 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTGWGRG*DKDQPQ
Trigger: TTGGGGTTGGTCCTTGTCCCAGCCTCTGCCCCAGCC...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCAAAGCAGGCGGCATCCTaGAGAAAGAAATTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPKQAAS*RKKFSG
Trigger: TCCAGAGAATTTCTTTCTGCAGGATGCCGCCTGCTT...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACGCATTTAGCCACATCTaGTGTAGCACCGCGGAGTTG +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHAFSHI*CSTAEL
Trigger: CAACTCCGCGGTGCTACAGCAGATGTGGCTAAATGC...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGCCAGGAGCAGCTGCAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGTCCCGATGCAGGCCTTaGCCAAATACCAATGACAGG +
Preference number: 2 (lower is better)
Translates to: GQEQLQRQYHELLLCLVLSRCRP*PNTNDR
Trigger: CCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGA...CAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCTCCACACCAGGCTGTaGGCTGGCCCAGGACACGTT +
Preference number: 2 (lower is better)
Translates to: GGILQKEILWTLFPMQALLHTRL*AGPGHV
Trigger: AACGTGTCCTGGGCCAGCCCACAGCCTGGTGTGGAG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACACTGCAAGTGGGAGGATaGCAGGTCCAGGGCCATGGT +
Preference number: 2 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTLQVGG*QVQGHG
Trigger: ACCATGGCCCTGGACCTGCCATCCTCCCACTTGCAG...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGCTTGTCCCATCTCTTTaGCAGCAGTGGGATCCTGCA +
Preference number: 2 (lower is better)
Translates to: QPFGGPITRATAQFGVTGLVPSL*QQWDPA
Trigger: TGCAGGATCCCACTGCTGCCAAAGAGATGGGACAAG...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR TCA 90 bp CAAATACCAATGACAGGCCCCAGAGCCAGGCGGGCTGAGGCCACCAGTCCGGTCAACAAGTCTCTTGCCTaGTGTGTGGGTGTGATATTA +
Preference number: 2 (lower is better)
Translates to: QIPMTGPRARRAEATSPVNKSLA*CVGVIL
Trigger: TAATATCACACCCACACATCAGGCAAGAGACTTGTT...GACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTGGGGCCTGTCATTGGTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGGACTTTATTCCCGATaGAGGCCTTGGCCAAATACC +
Preference number: 2 (lower is better)
Translates to: QPFGGPITRATAQFGVTGGLYSR*RPWPNT
Trigger: GGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTTCCCGATGCAGGCCTTaGCCAAATACCAATGACAGG +
Preference number: 2 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPSRCRP*PNTNDR
Trigger: CCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGA...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGGTGACAGGGAAGGTGTaGAGAAGCGATTCTAACCAG +
Preference number: 2 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLVTGKV*RSDSNQ
Trigger: CTGGTTAGAATCGCTTCTCCACACCTTCCCTGTCAC...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTAGAGCAGCCATTTGGTaGCCCCATAACAAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCRAAIW*PHNKSH
Trigger: GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCT...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTATGCTCTTGGGATGGTaGCACCACTGTGTCAAGCAC +
Preference number: 2 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCMLLGW*HHCVKH
Trigger: GTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCTCAGGCAGTGCTTGTaGGGCTGCACGGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLLRQCL*GCTVAG
Trigger: TCCTGCCACCGTGCAGCCCCACAAGCACTGCCTGAG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp GATGAAGAAATGCAGAAACTTGGGCAGATGCCCGTAATGCTCATCCAAGAGCAAGCTATGGGTCTCCTCTaGCCTAGGCCGGCCACCCCT +
Preference number: 2 (lower is better)
Translates to: DEEMQKLGQMPVMLIQEQAMGLL*PRPATP
Trigger: AGGGGTGGCCGGCCTAGGGCAGAGGAGACCCATAGC...TTGCTCTTGGATGAGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTCTGTGCACAGGTCTTaGGCCCTGCCAGGCCACACA +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLSVHRS*ALPGHT
Trigger: TGTGTGGCCTGGCAGGGCGCAAGACCTGTGCACAGA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGAGCCACCGCACAGTTTaGGGTGACAGGGAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: GGILQKEILWTLFPMQALSHRTV*GDREGV
Trigger: CACACCTTCCCTGTCACCCCAAACTGTGCGGTGGCT...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACAAGGAACAAGTCTCTTaGCTGATGTGTGGGTGTGAT +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHKEQVS*LMCGCD
Trigger: ATCACACCCACACATCAGGCAAGAGACTTGTTCCTT...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCTTGGCCTTCTGCAGTaGGAGGATGCGGTAGTGCCT +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLLGLLQ*EDAVVP
Trigger: AGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTCCATCCACAGTTCCTaGCTTATAACTCCCATATCC +
Preference number: 2 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHSIHSS*LITPIS
Trigger: GGATATGGGAGTTATAAGCCAGGAACTGTGGATGGA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGGTCCCGGGCCACTATaGCGTCCAAGTCCTCCTTCG +
Preference number: 2 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQGPGPL*RPSPPS
Trigger: CGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACC...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTAAAGGGGTCAGAGGATaGTCTGCGTTGCCGCTCAGA +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLKGVRG*SALPLR
Trigger: TCTGAGCGGCAACGCAGAGCATCCTCTGACCCCTTT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCAGGAGGGAAATCACTaGTCAGACAACACAAAAGAC +
Preference number: 2 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCQEGNH*SDNTKD
Trigger: GTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCACACCTGTGAACCTTaGCCTTCTGCAGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLHTCEP*PSAVGG
Trigger: TCCTCCCACTGCAGAAGGCCAAGGTTCACAGGTGTG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAGCCCCAAGAACTCTGTaGACAGGTCTTGCGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRAPRTL*TGLAPC
Trigger: GCAGGGCGCAAGACCTGTGCACAGAGTTCTTGGGGC...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGATCAGTGCCCAGCGGATaGTACCCCGCTATGGGTCTC +
Preference number: 2 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRSVPSG*YPAMGL
Trigger: GAGACCCATAGCGGGGTACCATCCGCTGGGCACTGA...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGCTCCACACCAGGCTGTaGGCTGGCCCAGGACACGTT +
Preference number: 2 (lower is better)
Translates to: CGEAILTRAIKKKLVKSELHTRL*AGPGHV
Trigger: AACGTGTCCTGGGCCAGCCCACAGCCTGGTGTGGAG...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACAAGAAATGCAGAAACTTaGGCAGATGCCCGTAATGCT +
Preference number: 2 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTRNAET*ADARNA
Trigger: AGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCT...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGTCCATCCACAGTTCCTaGCTTATAACTCCCATATCC +
Preference number: 2 (lower is better)
Translates to: GGILQKEILWTLFPMQALSIHSS*LITPIS
Trigger: GGATATGGGAGTTATAAGCCAGGAACTGTGGATGGA...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTAAGGAACAAGTCTCTTaGCTGATGTGTGGGTGTGAT +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLKEQVS*LMCGCD
Trigger: ATCACACCCACACATCAGGCAAGAGACTTGTTCCTT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR TCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTAACAAGTCTCTTGCCTaGTGTGTGGGTGTGATATTA +
Preference number: 2 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLNKSLA*CVGVIL
Trigger: TAATATCACACCCACACATCAGGCAAGAGACTTGTT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CAA 90 bp ATCCACAGTTCCTGGCTTATAACTCCCATATCCCTTGTTATAATGTaGGGGAACTTAGGCCTCAGAGGCAAGACTCAGACAACAGCATCT +
Preference number: 2 (lower is better)
Translates to: IHSSWLITPISLVIM*GNLGLRGKTQTTAS
Trigger: AGATGCTGTTGTCTGAGTCTTGCCTCTGAGGCCTAAGTTCCCCAACATTATAACAAGGGATATGGGAGTTATAAGCCAGGAACTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGCAGAAAGAAATTCTCTaGACTTTATTCCCGATGCAG +
Preference number: 2 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQQKEIL*TLFPMQ
Trigger: CTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTG...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR TCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGTCAACACCTAGTACTTaGGCAGAAAACGTTTGCTCA +
Preference number: 2 (lower is better)
Translates to: CGEAILTRAIKKKLVKSESTPST*AENVCS
Trigger: TGAGCAAACGTTTTCTGCTCAAGTACTAGGTGTTGA...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGCAGAAAGAAATTCTCTaGACTTTATTCCCGATGCAG +
Preference number: 2 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEQKEIL*TLFPMQ
Trigger: CTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTG...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CAA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGTGGGTCCTGGCAACCTaGCAGCTGCGCCGCCGGGGC +
Preference number: 3 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPWVLAT*QLRRRG
Trigger: GCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCCA...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp GGCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATaGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCC +
Preference number: 3 (lower is better)
Translates to: GRPPLRERWCPR*PPPPGLRLLPS
Trigger: GGAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp CGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTaGGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCC +
Preference number: 3 (lower is better)
Translates to: RHCGFRPHAHTP*APRGPPKQAAS
Trigger: GGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp TCTGCCCTAGGCCGGCCACCCCTCCGGGAACGCTGGTaGCCACGATGGCCACCTCCGCCAGGCCTCCGGCTC +
Preference number: 3 (lower is better)
Translates to: SALGRPPLRERW*PRWPPPPGLRL
Trigger: GAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGCCTAGGGCAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp GCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATaGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGG +
Preference number: 3 (lower is better)
Translates to: APHAATAASASG*GRPGCGPHRAG
Trigger: CCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCGTCCCCCAGCTGCGCTaGGGTGCCAGCATCCGCTGG +
Preference number: 3 (lower is better)
Translates to: GTLVPTMATSARPPAPAFVPQLR*GASIRW
Trigger: CCAGCGGATGCTGGCACCCAAGCGCAGCTGGGGGAC...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp GGGCGCGGGGGCATAGGCCAGTCCAGGGGGAAAGGCTaGGGCTCCACACGCGGCAACGGCAGCTTCAGCGTC +
Preference number: 3 (lower is better)
Translates to: GRGGIGQSRGKG*GSTRGNGSFSV
Trigger: GACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGCCTTTCCCCCTGGACTGGCCTATGCCCCCGCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCGCTGGGCCCAGCAACTaGGCTGTCCCGCACGGTCCT +
Preference number: 3 (lower is better)
Translates to: GTLVPTMATSARPPAPAFAGPSN*AVPHGP
Trigger: AGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGC...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp GTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTaGCCTAGGCCGGCCACCCCTCCGGGAACGCTGGTG +
Preference number: 3 (lower is better)
Translates to: VPSGWYPAMGLL*PRPATPPGTLV
Trigger: CACCAGCGTTCCCGGAGGGGTGGCCGGCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp GCCAGGGATGAGGGTGGGTCCTGGCAACCTTGCAGCTaGGCCGCCGGGGCTCCTGGGTCCAGTCCACAGCAC +
Preference number: 3 (lower is better)
Translates to: ARDEGGSWQPCS*AAGAPGSSPQH
Trigger: GTGCTGTGGACTGGACCCAGGAGCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCCACCCTCATCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp AGCGCGTCGATGGGGCCCAAGTCCAGCAGCTGCGAGTaGGACCAGTCGGTCTCCTCCAGCGGCGGCGGCTCT +
Preference number: 3 (lower is better)
Translates to: SASMGPKSSSCE*DQSVSSSGGGS
Trigger: AGAGCCGCCGCCGCTGGAGGAGACCGACTGGTCGCACTCGCAGCTGCTGGACTTGGGCCCCATCGACGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp CCCCAGCTGCGCTTGGGTGCCAGCATCCGCTGGGCCTaGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGT +
Preference number: 3 (lower is better)
Translates to: PQLRLGASIRWA*SSGAKECGSAG
Trigger: ACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGCTGGCACCCAAGCGCAGCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCCTTCTCCCCCATCCATaGGAGCAGCTTCCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: PGTLVPTMATSARPPAPALLPHP*EQLPLP
Trigger: TGGCAGAGGAAGCTGCTCCAATGGATGGGGGAGAAG...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGCTGAGGAAGGAGAATaGCTTGAATCCGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: PGTLVPTMATSARPPAPAAEEGE*LESGRQ
Trigger: CTGCCTCCCGGATTCAAGCAATTCTCCTTCCTCAGC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CAA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTGGTGTGATCTCTGCTaGCTGCAACCTCCACCTCCT +
Preference number: 3 (lower is better)
Translates to: PGTLVPTMATSARPPAPAWCDLC*LQPPPP
Trigger: AGGAGGTGGAGGTTGCAGCAAGCAGAGATCACACCA...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp AAGTTGAGCGCGTCGATGGGGCCCAAGTCCAGCAGCTaGGAGTGCGACCAGTCGGTCTCCTCCAGCGGCGGC +
Preference number: 3 (lower is better)
Translates to: KLSASMGPKSSS*ECDQSVSSSGG
Trigger: GCCGCCGCTGGAGGAGACCGACTGGTCGCACTCGCAGCTGCTGGACTTGGGCCCCATCGACGCGCTCAACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp ACCAGGAGGTGCCCGAGGGTATCACGGAGGCGCGTGTaGGTGCCCCAGAGACCACTGACGTCTGCGATGGGG +
Preference number: 3 (lower is better)
Translates to: TRRCPRVSRRRV*VPQRPLTSAMG
Trigger: CCCCATCGCAGACGTCAGTGGTCTCTGGGGCACCCACACGCGCCTCCGTGATACCCTCGGGCACCTCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp GTCCGGTCAGCTGTAGGTGTCAGGGTCCGCGTCCGCTaGCAGAAAGTAGCGCTGCAGGGCCGGCTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: VRSAVGVRVRVR*QKVALQGRLQE
Trigger: CTCCTGCAGCCGGCCCTGCAGCGCTACTTTCTGCCAGCGGACGCGGACCCTGACACCTACAGCTGACCGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCTCTGTGCACAGGTCTaGCGCCCTGCCAGGCCACAC +
Preference number: 3 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHLCAQV*RPARPH
Trigger: GTGTGGCCTGGCAGGGCGCAAGACCTGTGCACAGAG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR TCA 72 bp TCCGCTGCTGCGCCCGCAGCTGCTCACAGAAGAAGTTaGGCGCGTCGATGGGGCCCAAGTCCAGCAGCTGCG +
Preference number: 3 (lower is better)
Translates to: SAAAPAAAHRRS*ARRWGPSPAAA
Trigger: CGCAGCTGCTGGACTTGGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCAGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTaGGAGAAGTGCTGGCCCAGGGCTCCCAGGTCCTGT +
Preference number: 3 (lower is better)
Translates to: WVGGIGTVTRGD*EKCWPRAPRSC
Trigger: ACAGGACCTGGGAGCCCTGGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TCAGTCTCATCGCGGACCTCGCGGACCTCTGCGGCTTaGCCTCCTGCAGCCGGAGGATGGGGTGGTACCAGT +
Preference number: 3 (lower is better)
Translates to: SVSSRTSRTSAA*PPAAGGWGGTS
Trigger: ACTGGTACCACCCCATCCTCCGGCTGCAGGAGGCCAAGCCGCAGAGGTCCGCGAGGTCCGCGATGAGACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCGTGGGGACAGGGCTGTaGGCACTGTTTGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: PLGLGWPGAPQPQGILACVGTGL*ALFGLQ
Trigger: CTGCAGCCCAAACAGTGCCAACAGCCCTGTCCCCAC...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 72 bp CCAGGCAGAAGCTCTTCAGCGTCTCGGAGAGCACTCTaGGACGGAGCTGAGGGGTCCCCCAGCTGCGCTTGG +
Preference number: 3 (lower is better)
Translates to: PGRSSSASRRAL*DGAEGSPSCAW
Trigger: CCAAGCGCAGCTGGGGGACCCCTCAGCTCCGTCTCAGAGTGCTCTCCGAGACGCTGAAGAGCTTCTGCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp AGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTaGGCACCCATGCTCTTGGGATGGTGGCACCACTGT +
Preference number: 3 (lower is better)
Translates to: SWAQQLGCPARS*APMLLGWWHHC
Trigger: ACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp AAGGCACCTCTGAGACCTGCGAGAGCCTCCCGAAGATaGCGGAGGCCGACCAGGAGGTGCCCGAGGGTATCA +
Preference number: 3 (lower is better)
Translates to: KAPLRPARASRR*RRPTRRCPRVS
Trigger: TGATACCCTCGGGCACCTCCTGGTCGGCCTCCGGCATCTTCGGGAGGCTCTCGCAGGTCTCAGAGGTGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp AGCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTaGGGCTCCGCAGGTGAGACCACCATCAAAGGCACC +
Preference number: 3 (lower is better)
Translates to: SIRWAWSSGAKE*GSAGETTIKGT
Trigger: GGTGCCTTTGATGGTGGTCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp TTCTCCTGGAGCGAACTCCGCTGCTGCGCCCGCAGCTaGTCACAGAAGAAGTTGAGCGCGTCGATGGGGCCC +
Preference number: 3 (lower is better)
Translates to: FSWSELRCCARS*SQKKLSASMGP
Trigger: GGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCTCCAGGAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp CCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTaGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PARSCAPMLLGW*HHCVKHRPGKE
Trigger: CTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp TTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTaGGATGGTGGCACCACTGTGTCAAGCACCGGCCTG +
Preference number: 3 (lower is better)
Translates to: LAVPHGPAHPCS*DGGTTVSSTGL
Trigger: CAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp TCTCTCTCCACTCTGAGGGTCCCGGCACTCCACTGCTaGGACCCCCTTCCAGACTGCATGCCCAGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: SLSTLRVPALHC*DPLPDCMPSRP
Trigger: TGGCCTGCTGGGCATGCAGTCTGGAAGGGGGTCCCAGCAGTGGAGTGCCGGGACCCTCAGAGTGGAGAGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TGGGCTGCAGTGCTGACCTCAGCCCGGGCAAGACAGTaGGCAGCTTGGGGTACAGCACACACATCCCGGGTC +
Preference number: 3 (lower is better)
Translates to: WAAVLTSARARQ*AAWGTAHTSRV
Trigger: GACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGCTGAGGTCAGCACTGCAGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp GCCAGAAGCTGGGATGCCTTGCTGTGCACCCTACGGTaGGTGGGTGGGATCGGCACTGTGACTCGGGGAGAC +
Preference number: 3 (lower is better)
Translates to: ARSWDALLCTLR*VGGIGTVTRGD
Trigger: GTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCACCGTAGGGTGCACAGCAAGGCATCCCAGCTTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TGGCAGCAGTGGGATCCTGCACTGCAAGTGGGAGGATaGCAGGTCCAGGGCCATGGTCGTCCTCCCTCGGAG +
Preference number: 3 (lower is better)
Translates to: WQQWDPALQVGG*QVQGHGRPPSE
Trigger: CTCCGAGGGAGGACGACCATGGCCCTGGACCTGCCATCCTCCCACTTGCAGTGCAGGATCCCACTGCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTaGCTTGCCCCTGGCTCCGCATTTAGCCACATCTGC +
Preference number: 3 (lower is better)
Translates to: WDGLGRHNHRAS*LAPGSAFSHIC
Trigger: GCAGATGTGGCTAAATGCGGAGCCAGGGGCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp CCAGTTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTaGAGTCCAGGTCTGGGCCCTGGACCCAGGTCATCA +
Preference number: 3 (lower is better)
Translates to: PVSGGSKCAGRP*SPGLGPGPRSS
Trigger: TGATGACCTGGGTCCAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTACTGTCCCAGCAGGCTaGAACCCAAACTGGGGGCCT +
Preference number: 3 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSTVPAG*NPNWGP
Trigger: AGGCCCCCAGTTTGGGTTCAAGCCTGCTGGGACAGT...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CAA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACACAGGGCATCCTGGCTaGCCCCTGGCTCCGCATTTA +
Preference number: 3 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHTGHPG*PLAPHL
Trigger: TAAATGCGGAGCCAGGGGCAAGCCAGGATGCCCTGT...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 72 bp GTACAGCACACACATCCCGGGTCTCTCTCTCCACTCTaGGGGTCCCGGCACTCCACTGCTGGGACCCCCTTC +
Preference number: 3 (lower is better)
Translates to: VQHTHPGSLSPL*GSRHSTAGTPF
Trigger: GAAGGGGGTCCCAGCAGTGGAGTGCCGGGACCCTCAGAGTGGAGAGAGAGACCCGGGATGTGTGTGCTGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp CCTGGATCATGTCCTCCAGTTTCTGGTGGCAGCAAGTaGGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: PGSCPPVSGGSK*AGRPWSPGLGP
Trigger: AGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAACTGGAGGACATGATCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp GCAGGTGAGACCACCATCAAAGGCACCTCTGAGACCTaGGAGAGCCTCCCGAAGATGCCGGAGGCCGACCAG +
Preference number: 3 (lower is better)
Translates to: AGETTIKGTSET*ESLPKMPEADQ
Trigger: CTGGTCGGCCTCCGGCATCTTCGGGAGGCTCTCGCAGGTCTCAGAGGTGCCTTTGATGGTGGTCTCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp TGTGGGTGCGCAGCCTTCTCCTGGAGCGAACTCCGCTaGTGCGCCCGCAGCTGCTCACAGAAGAAGTTGAGC +
Preference number: 3 (lower is better)
Translates to: CGCAAFSWSELR*CARSCSQKKLS
Trigger: GCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCTCCAGGAGAAGGCTGCGCACCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATaGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: CPARSCAPMLLG*WHHCVKHRPGK
Trigger: TTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp GAGGTGAAGAGGCAGGTTCAGCTGGGCCCAGCAACTTaGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTT +
Preference number: 3 (lower is better)
Translates to: EVKRQVQLGPAT*LSRTVLRTHAL
Trigger: AAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGAACCTGCCTCTTCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp GCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTATaGCGTCCAAGTCCTCCTTCGGCACCAGGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: ASTAEGLGPGPL*RPSPPSAPGAE
Trigger: CTCAGCACCTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp GTGCTGACCTCAGCCCGGGCAAGACAGTGGGCAGCTTaGGGTACAGCACACACATCCCGGGTCTCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: VLTSARARQWAA*GTAHTSRVSLS
Trigger: GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGCTGAGGTCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp CTGGGATGCCTTGCTGTGCACCCTACGGTGGGTGGGTaGGATCGGCACTGTGACTCGGGGAGACTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: LGCLAVHPTVGG*DRHCDSGRLGE
Trigger: TTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCACCGTAGGGTGCACAGCAAGGCATCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp CCATTGGAGCAGCTTCCTCTGCCACTGGGTTTGGGATaGCCTGGGGCGCCACAACCACAGGGCATCCTGGCT +
Preference number: 3 (lower is better)
Translates to: PLEQLPLPLGLG*PGAPQPQGILA
Trigger: AGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAGGAAGCTGCTCCAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp CCCATCCATTGGAGCAGCTTCCTCTGCCACTGGGTTTaGGATGGCCTGGGGCGCCACAACCACAGGGCATCC +
Preference number: 3 (lower is better)
Translates to: PIHWSSFLCHWV*DGLGRHNHRAS
Trigger: GGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAGGAAGCTGCTCCAATGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp GTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTaGACCCAGGTCATCATCTCCTTGAATAGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: VRRPALESRSGP*TQVIISLNRKP
Trigger: GGGCTTCCTATTCAAGGAGATGATGACCTGGGTCCAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACGGCCTCAGGCAGTGCTaGTGGGGCTGCACGGTGGCA +
Preference number: 3 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHGLRQC*WGCTVA
Trigger: TGCCACCGTGCAGCCCCACAAGCACTGCCTGAGGCC...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGCTCTGTGCACAGGTCTaGCGCCCTGCCAGGCCACAC +
Preference number: 3 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLLCAQV*RPARPH
Trigger: GTGTGGCCTGGCAGGGCGCAAGACCTGTGCACAGAG...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CAA 90 bp AGGCCCAGCCCGTGCAGCAGCTTCTTGAGCTCTGGCCGGCAGTGCACGGGAGAGCTAGAGAGAGGTTCCTaGTCCCATCTCTTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: RPSPCSSFLSSGRQCTGELERGS*SHLFGS
Trigger: GCTGCCAAAGAGATGGGACAAGGAACCTCTCTCTAG...CTCTCCCGTGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGGGCTGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCCGTGCAGCAGCTTCTaGAGCTCTGGCCGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHPCSSF*SSGRQC
Trigger: GCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGG...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 72 bp TATCACGGAGGCGCGTGTGGGTGCCCCAGAGACCACTaGCGTCTGCGATGGGGTCTCCTGAAGCTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: YHGGACGCPRDH*RLRWGLLKLLD
Trigger: ATCCAGGAGCTTCAGGAGACCCCATCGCAGACGTCAGTGGTCTCTGGGGCACCCACACGCGCCTCCGTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp AGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATaGTCTTGGGATGGTGGCACCACTGTGTCAAGCACC +
Preference number: 3 (lower is better)
Translates to: SNLAVPHGPAHP*SWDGGTTVSST
Trigger: GGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp CCGCATTTAGCCACATCTGCTGTAGCACCGCGGAGTTaGGCACATAGCCGGGGAAGCAGATGGGCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: PHLATSAVAPRS*AHSRGSRWASG
Trigger: GCCTGAGGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGTGGCTAAATGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TTCTCCCCCATCCATTGGAGCAGCTTCCTCTGCCACTaGGTTTGGGATGGCCTGGGGCGCCACAACCACAGG +
Preference number: 3 (lower is better)
Translates to: FSPIHWSSFLCH*VWDGLGRHNHR
Trigger: CCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAGGAAGCTGCTCCAATGGATGGGGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTAGAAGCTGGGATGCCTaGCTGTGCACCCTACGGTGG +
Preference number: 3 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGRSWDA*LCTLRW
Trigger: CCACCGTAGGGTGCACAGCAAGGCATCCCAGCTTCT...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGAGATCACTGCTCATGTaGGGCAGCAGTCTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: FLVAASAQAGLGVQVWALRSLLM*GSSLSS
Trigger: GCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACGGGGGCTGGTCCAGGTaGAGCAAGTGTACGAGCAGG +
Preference number: 3 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHGGWSR*SKCTSR
Trigger: CCTGCTCGTACACTTGCTCAACCTGGACCAGCCCCC...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 72 bp CTGCAGATCCAGACTGATGCCCAGGTAGTGGCTCAGTaGGGAGCGGGCCAGAAGCTGGGATGCCTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LQIQTDAQVVAQ*GAGQKLGCLAV
Trigger: CACAGCAAGGCATCCCAGCTTCTGGCCCGCTCCTCACTGAGCCACTACCTGGGCATCAGTCTGGATCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp GGCTGGTCCAGGTTGAGCAAGTGTACGAGCAGGCCCTaGAGCTGGCCTTGGAGATCACTGCTCATGTTGGGC +
Preference number: 3 (lower is better)
Translates to: GWSRLSKCTSRP*SWPWRSLLMLG
Trigger: GCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACACTTGCTCAACCTGGACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR TCA 72 bp TGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTaGACCCAAACTGGGGGCCTTGACATCGCTAGACAC +
Preference number: 3 (lower is better)
Translates to: CDPAAAGLSQQA*TQTGGLDIARH
Trigger: GTGTCTAGCGATGTCAAGGCCCCCAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR TCA 72 bp GTCCTGACCAAAAATCAGAGGGCCTTGGCCACTCTGTaGCCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: VLTKNQRALATL*PSSCRTVPAGL
Trigger: CAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTCAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR TCA 72 bp GCACCAGGTGCTGAGATGTTGCCCTCCGACGATGGATaGGAGACAAGGCCTCGCTGCAAACAGGGACAGGCA +
Preference number: 3 (lower is better)
Translates to: APGAEMLPSDDG*ETRPRCKQGQA
Trigger: TGCCTGTCCCTGTTTGCAGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAACATCTCAGCACCTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp GTCCAAGTCCTCCTTCGGCACCAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAGAGACAAGGCCTCGCT +
Preference number: 3 (lower is better)
Translates to: VQVLLRHQVLRC*PPTMDERQGLA
Trigger: AGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAGGACTTGGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp ATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTaGACACGGTCGACCCACGTGGTCTTCTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: MLGSSLSSTCRM*TRSTHVVFSSR
Trigger: CCTGCTGGAGAAGACCACGTGGGTCGACCGTGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR GCA 72 bp GTACGAGCAGGCCCTGCAGCTGGCCTTGGAGATCACTaGTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCA +
Preference number: 3 (lower is better)
Translates to: VRAGPAAGLGDH*SCWAAVSVAPA
Trigger: TGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp GGCCCTGCAGCTGGCCTTGGAGATCACTGCTCATGTTaGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCA +
Preference number: 3 (lower is better)
Translates to: GPAAGLGDHCSC*AAVSVAPAGCA
Trigger: TGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGCCTGCCTTTGCTGTCTaGGAGATAGCCATAAAGAAG +
Preference number: 3 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGPAFAV*EIAIKK
Trigger: CTTCTTTATGGCTATCTCCAAGACAGCAAAGGCAGG...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CAA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGACAGCATCTTTCTCTTaGACCTTTTCCCACCCTCCT +
Preference number: 3 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGTASFS*TFSHPP
Trigger: AGGAGGGTGGGAAAAGGTCAAAGAGAAAGATGCTGT...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CAA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGCCTTGTCCCATCTCTTaGGCAGCAGTGGGATCCTGC +
Preference number: 3 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLPCPIS*AAVGSC
Trigger: GCAGGATCCCACTGCTGCCAAAGAGATGGGACAAGG...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTGGTGTGATCTCTGCTaGCTGCAACCTCCACCTCCT +
Preference number: 3 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHWCDLC*LQPPPP
Trigger: AGGAGGTGGAGGTTGCAGCAAGCAGAGATCACACCA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp TGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTaGAGAAAGAAATTCTCTGGACTTTATTCCCGATGC +
Preference number: 3 (lower is better)
Translates to: CAPRGPPKQAAS*RKKFSGLYSRC
Trigger: GCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp TCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTaGAGGATGTGCACACGGTCGACCCACGTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: SLLMLGSSLSST*RMCTRSTHVVF
Trigger: GAAGACCACGTGGGTCGACCGTGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp TGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTaGCCCCATAACAAGAGCCACCGCACAGTTTGGGGT +
Preference number: 3 (lower is better)
Translates to: CQAPAWERAAIW*PHNKSHRTVWG
Trigger: ACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp CTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTaGTGGCCCCATAACAAGAGCCACCGCACAGTTTGG +
Preference number: 3 (lower is better)
Translates to: LCQAPAWERAAI*WPHNKSHRTVW
Trigger: CCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp CTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTaGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAG +
Preference number: 3 (lower is better)
Translates to: LGMVAPLCQAPA*ERAAIWWPHNK
Trigger: CTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp TCCAGGTTGAGCAAGTGTACGAGCAGGCCCTGCAGCTaGCCTTGGAGATCACTGCTCATGTTGGGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: SRLSKCTSRPCS*PWRSLLMLGSS
Trigger: ACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACACTTGCTCAACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACAGGAAGGAGAATTGCTaGAATCCGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHRKENC*NPGGRG
Trigger: ACCTCTGCCTCCCGGATTCAAGCAATTCTCCTTCCT...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp TTGAGCAAGTGTACGAGCAGGCCCTGCAGCTGGCCTTaGAGATCACTGCTCATGTTGGGCAGCAGTCTCAGT +
Preference number: 3 (lower is better)
Translates to: LSKCTSRPCSWP*RSLLMLGSSLS
Trigger: ACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACACTTGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR CCA 72 bp ACAGAGTCTCGCTCTATTGCCGAGGCTGTAGTGCAGTaGTGTGATCTCTGCTTGCTGCAACCTCCACCTCCT +
Preference number: 3 (lower is better)
Translates to: TESRSIAEAVVQ*CDLCLLQPPPP
Trigger: AGGAGGTGGAGGTTGCAGCAAGCAGAGATCACACCACTGCACTACAGCCTCGGCAATAGAGCGAGACTCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp CAACACCTAGTACTTGAGCAGAAAACGTTTGCTCAGTaGCCAGCGGATGGTACCCCGCTATGGGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: QHLVLEQKTFAQ*PADGTPLWVSS
Trigger: AGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCTCAAGTACTAGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR TCA 72 bp TCTCTAAGGTCAGCCCGCATCTCAACACCTAGTACTTaGGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGG +
Preference number: 3 (lower is better)
Translates to: SLRSARISTPST*AENVCSVPSGW
Trigger: CCATCCGCTGGGCACTGAGCAAACGTTTTCTGCTCAAGTACTAGGTGTTGAGATGCGGGCTGACCTTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR-3UTR CAA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAGGCTGTTGGCACTGTTaGGGCTGCAGTGCTGACCTC +
Preference number: 3 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRGCWHC*GCSADL
Trigger: GAGGTCAGCACTGCAGCCCAAACAGTGCCAACAGCC...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
3UTR-3UTR CAA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGACAGCATCTTTCTCTTaGACCTTTTCCCACCCTCCT +
Preference number: 3 (lower is better)
Translates to: GGILQKEILWTLFPMQALTASFS*TFSHPP
Trigger: AGGAGGGTGGGAAAAGGTCAAAGAGAAAGATGCTGT...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp TCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATaGAGGCCTTGGCCAAATACCAATGACAGGCCCCAG +
Preference number: 3 (lower is better)
Translates to: SCRKKFSGLYSR*RPWPNTNDRPQ
Trigger: CTGGGGCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp TCCAAAGCAGGCGGCATCCTGCAGAAAGAAATTCTCTaGACTTTATTCCCGATGCAGGCCTTGGCCAAATAC +
Preference number: 3 (lower is better)
Translates to: SKAGGILQKEIL*TLFPMQALAKY
Trigger: GTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCTGCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CCA 72 bp AGAATAAAAGTAACGAAAGCAAGGTCTGCAAACTCCTaGTCTCACCTGCATCGACCCGGAAGGCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: RIKVTKARSANS*SHLHRPGRLIL
Trigger: CAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGACCTTGCTTTCGTTACTTTTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR GCA 72 bp TCTCTTTGCCAGAATAAAAGTAACGAAAGCAAGGTCTaGAAACTCCTGGTCTCACCTGCATCGACCCGGAAG +
Preference number: 3 (lower is better)
Translates to: SLCQNKSNESKV*KLLVSPASTRK
Trigger: CTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGACCTTGCTTTCGTTACTTTTATTCTGGCAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGCTACCTCGCCCACCTaGGCCGCCGCCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPAATSPT*AAACRS
Trigger: GGACCTGCAGGCGGCGGCGCAGGTGGGCGAGGTAGC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCCCTTCCTGGCGCTGCTaGCAGGAGGGTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAPSWRC*QEGGGW
Trigger: CCAGCCCCCACCCTCCTGGCAGCAGCGCCAGGAAGG...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCCAGAGCCAGGCGGGCTaGGGCCACCAGTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPAQSQAG*GHQSGQ
Trigger: CTGACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTG...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCCCCCATGGAGGTTGGTaGGCCTCTGCAGTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAPHGGW*ASAVGR
Trigger: CCGCCCAACTGCAGAGGCTCACCAACCTCCATGGGG...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGCCCCATGGAGGTTGGTaGGCCTCTGCAGTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGPHGGW*ASAVGR
Trigger: CCGCCCAACTGCAGAGGCTCACCAACCTCCATGGGG...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGCGTACGCGCCACAGCTaGATGCTGCTCGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGRTRHS*MLLAHR
Trigger: CCTGTGCGCGAGCAGCATGCAGCTGTGGCGCGTACG...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGAGCGTGCCGTCCGTGTaGCCCACCACTGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGSVPSV*PTTGRY
Trigger: GTACCTGCCAGTGGTGGGGCACACGGACGGCACGCT...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCCCGGCACTCCACTGCTaGGACCCCCTTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAPALHC*DPLPDC
Trigger: GCAGTCTGGAAGGGGGTCCCAGCAGTGGAGTGCCGG...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCAGTGGTTCCAGCCCATaGGTCAGGCGCGCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGSGSSP*VRRAAR
Trigger: GCGCGCGGCGCGCCTGACGCATGGGCTGGAACCACT...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCACCTGCGCCGCCGCCTaGAGGTCCCAGGTGCGTAGC +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFTCAAA*RSQVRS
Trigger: GCTACGCACCTGGGACCTGCAGGCGGCGGCGCAGGT...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCCGCAACTCGCCCCAGTaGTGGCGCACGATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPARNSPQ*WRTISQ
Trigger: CTGGGAGATCGTGCGCCAGCACTGGGGCGAGTTGCG...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAGGTGCAGCACGCTCATaGGGCAGCGCGCCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAEGAARS*GSAPRW
Trigger: CCAACGCGGCGCGCTGCCCCATGAGCGTGCTGCACC...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCGTGACTCGGGGAGACTaGGAGAAGTGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAVTRGD*EKCWPR
Trigger: CCTGGGCCAGCACTTCTCCCAGTCTCCCCGAGTCAC...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGAGCATCCGCTGGGCCTaGAGCTCCGGGGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGSIRWA*SSGAKE
Trigger: CTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGCT...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGTGGGATCGGCACTGTaGCTCGGGGAGACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPAVGSAL*LGETGR
Trigger: TCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCAC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGTGCGGCTCCGCAGGTaGGACCACCATCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPAVRLRR*DHHQRH
Trigger: GTGCCTTTGATGGTGGTCTCACCTGCGGAGCCGCAC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCAACTCTGAGACGGAGCTaGGGGGTCCCCCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: AAAPHAATAASASGWGRPTLRRS*GVPQLR
Trigger: GCGCAGCTGGGGGACCCCTCAGCTCCGTCTCAGAGT...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGTGGGATGCCTTGCTGTaGACCCTACGGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGWDALL*TLRWVG
Trigger: ACCCACCCACCGTAGGGTGCACAGCAAGGCATCCCA...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAACCAGGCCCTCGATCGTaGCCGCCTCCGGGTATGCCT +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAEPGPRS*PPPGMP
Trigger: AGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGG...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGAGCACCTGCAGGATGTaGACACGGTCGACCCACGTG +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGSTCRM*TRSTHV
Trigger: CACGTGGGTCGACCGTGTGCACATCCTGCAGGTGCT...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTCCAGCAGCTGCGAGTaGGACCAGTCGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPASSSCE*DQSVSS
Trigger: GGAGGAGACCGACTGGTCGCACTCGCAGCTGCTGGA...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCGCCCCAAGAACTCTGTaGACAGGTCTTGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAAPRTL*TGLAPC
Trigger: GCAGGGCGCAAGACCTGTGCACAGAGTTCTTGGGGC...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCAACTCGCCCCAGTGCTaGCGCACGATCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPANSPQC*RTISQE
Trigger: CTCCTGGGAGATCGTGCGCCAGCACTGGGGCGAGTT...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCAGCTTCCTCTGCCACTaGGTTTGGGATGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQASFLCH*VWDGLG
Trigger: CCCCAGGCCATCCCAAACCCAGTGGCAGAGGAAGCT...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTGCGCAGCCTTCTCCTaGAGCGAACTCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPACAAFS*SELRCC
Trigger: GCAGCAGCGGAGTTCGCTCCAGGAGAAGGCTGCGCA...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGAGCCCTGCCCACCCCCTaGTCGCTCAGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRALPTP*SLSHSR
Trigger: CCTGCTGTGGCTGAGCGAGCAGGGGGTGGGCAGGGC...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGGCCAGAGCGCCAGGCTaGTGTTCATCTCCGCAACGA +
Preference number: 4 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPARAPG*CSSPQR
Trigger: TCGTTGCGGAGATGAACAGCAGCCTGGCGCTCTGGC...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCCGTACGCGCCACAGCTaGATGCTGCTCGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFRTRHS*MLLAHR
Trigger: CCTGTGCGCGAGCAGCATGCAGCTGTGGCGCGTACG...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAAGCAGTAGGCCACGGCTaGCGCGCAGTCCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKEAVGHG*RAVLRL
Trigger: GAGCCGGAGGACTGCGCGGCAGCCGTGGCCTACTGC...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAACCGGGCCCGGGCTGTaGGCCTCCGTTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAETGPGL*ASVWKT
Trigger: TGTCTTCCAAACGGAGGCGCACAGCCCGGGCCCGGT...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCGCCCGCCTCCGGGTATaGCTGCAGGCTGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFARLRV*LQAEDG
Trigger: CCCATCTTCAGCCTGCAGGCATACCCGGAGGCGGGC...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAGCCTCCCGAAGATaGCGGAGGCCGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAERASRR*RRPTRR
Trigger: CCTCCTGGTCGGCCTCCGGCATCTTCGGGAGGCTCT...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCTGGAGCGAACTCCGCTaGTGCGCCCGCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFWSELR*CARSCS
Trigger: TGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCTCCA...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCGCTATGGGTCTCCTCTaGCCTAGGCCGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGAMGLL*PRPATP
Trigger: AGGGGTGGCCGGCCTAGGGCAGAGGAGACCCATAGC...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCCTCCAGGCGGCGCAGTaGTTCCAGCCCATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGLQAAQ*FQPMRQ
Trigger: CTGACGCATGGGCTGGAACCACTGCGCCGCCTGGAG...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAATCCGTGGGGTCGTCCTaGGGCCGGTGGTCTAATCGC +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAESVGSS*GRWSNR
Trigger: GCGATTAGACCACCGGCCCCAGGACGACCCCACGGA...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGGTGAGCCTCTGCAGTTaGGCGGAAGTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGVSLCS*AEVSDS
Trigger: GGAGTCACTGACTTCCGCCCAACTGCAGAGGCTCAC...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCACTCTGCCACTGGGTTTaGGATGGCCTGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: AAAPHAATAASASGWGRPLCHWV*DGLGRH
Trigger: GTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAG...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCTCACGGAGGCGCGTGTaGGTGCCCCAGAGACCACTG +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFSRRRV*VPQRPL
Trigger: CAGTGGTCTCTGGGGCACCCACACGCGCCTCCGTGA...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCAGCCGGAGGATGGGGTaGTACCAGTGCTCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFSRRMG*YQCSRG
Trigger: TCCGCGGGAGCACTGGTACCACCCCATCCTCCGGCT...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGAGCTTCAGCGTCCGGATaGGGCCGTCCAGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRASASG*GRPGCG
Trigger: GCCGCACCCTGGACGGCCCCATCCGGACGCTGAAGC...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGCAACGAGCAGCAGCCTaGGGTCGGGAACCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EARPSIVPASGYACRLKMQRAAA*GREPAG
Trigger: GCCTGCCGGTTCCCGACCTCAGGCTGCTGCTCGTTG...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCAGCAGCACAGGCCAGTaGTGTGGTCCGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGSSTGQ*CGPWGR
Trigger: ACGACCCCACGGACCACATCACTGGCCTGTGCTGCT...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp AGGCCCAGCCCGTGCAGCAGCTTCTTGAGCTCTGGCCGGCAGTGCACGGGAGAGGGCCTGCATGGGACCTaGGGCTGGCTGCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: RPSPCSSFLSSGRQCTGEGLHGT*GWLPHG
Trigger: TCCATGGGGCAGCCAGCCTCAGGTCCCATGCAGGCC...CTCTCCCGTGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGGGCTGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGGCCTCCAGGAGGGCTaGGCAGGCCTGCATGGGACC +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGGLQEG*AGLHGT
Trigger: GGTCCCATGCAGGCCTGCTCAGCCCTCCTGGAGGCC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAATCTTCCTTGTGCAGGTaGAGGCGGCCCGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKESSLCR*RRPAPS
Trigger: GGACGGCGCGGGCCGCCTGCACCTGCACAAGGAAGA...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGACGAGAGTCCAGGCATaGAGATCGAAGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGTRVQA*RSKVST
Trigger: CGTGCTCACCTTCGATCTGCATGCCTGGACTCTCGT...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGTGGCAACCTTGCAGCTaGGCCGCCGGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGWQPCS*AAGAPG
Trigger: CCCAGGAGCCCCGGCGGCGCAGCTGCAAGGTTGCCA...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGGGTCCTGGCAACCTTaGAGCTGCGCCGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGGSWQP*SCAAGA
Trigger: AGCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCATCCAGCAGCTGCGAGTaGGACCAGTCGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPHAATAASASGWGRPSSSCE*DQSVSS
Trigger: GGAGGAGACCGACTGGTCGCACTCGCAGCTGCTGGA...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCCCAGCCCGTGCAGCAGCTTCTTGAGCTCTGGCCGGCAGTGCACGGGAGAGGACCTCGCGGACCTCTaGGGCTTGGCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPSPCSSFLSSGRQCTGEDLADL*GLASCS
Trigger: GCTGCAGGAGGCCAAGCCGCAGAGGTCCGCGAGGTC...CTCTCCCGTGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGGGCTGGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGAGACAAGGCCTCGCTaGAAACAGGGACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPAETRPR*KQGQAQ
Trigger: CTGTGCCTGTCCCTGTTTGCAGCGAGGCCTTGTCTC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCCTCAGGCAGTGCTTGTaGGGCTGCACGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFLRQCL*GCTVAG
Trigger: TCCTGCCACCGTGCAGCCCCACAAGCACTGCCTGAG...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCGCCGCCGGGGCTCCTaGGTCCAGTCCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHRRRGS*VQSTAL
Trigger: GAGTGCTGTGGACTGGACCCAGGAGCCCCGGCGGCG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGTCCCCCAGCTGCGCTTaGGTGCCAGCATCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: EARPSIVPASGYACRLKMSPSCA*VPASAG
Trigger: CCCAGCGGATGCTGGCACCCAAGCGCAGCTGGGGGA...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAACTTCCGCCGCCACTGTaGGTTCAGGCCGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKELPPPL*VQAARP
Trigger: TGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGAAG...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCGCTGGTGCCCACGATaGCCACCTCCGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSRWCPR*PPPPGL
Trigger: GAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCCCCATGCTCTTGGGATaGTGGCACCACTGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAPMLLG*WHHCVK
Trigger: CTTGACACAGTGGTGCCACCATCCCAAGAGCATGGG...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATCAACGAGCAGCAGCCTaGGGTCGGGAACCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDQRAAA*GREPAG
Trigger: GCCTGCCGGTTCCCGACCTCAGGCTGCTGCTCGTTG...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCAGGCGGCGACCACCTaGACGGAACTGCCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSQAATT*TELPER
Trigger: GCGCTCTGGCAGTTCCGTTCAGGTGGTCGCCGCCTG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAACCACAGCCAGACGCATaGGCCTGCCTGTTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKEPQPDA*ACLLGS
Trigger: CGAGCCCAACAGGCAGGCTCATGCGTCTGGCTGTGG...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCCTCATCGCACACCTGTaGACCTTGGCCTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPALIAHL*TLAFCS
Trigger: ACTGCAGAAGGCCAAGGTTCACAGGTGTGCGATGAG...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCGGGCTCGGGGGCGGGTaGAGTGCTGACCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWAGLGGG*SADPRS
Trigger: GCTGCGAGGGTCAGCACTGCACCCGCCCCCGAGCCC...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGCCTGCAGGTCCCAGGTaGGTAGCGTCCCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGPAGPR*VASRPA
Trigger: CGCAGGACGGGACGCTACGCACCTGGGACCTGCAGG...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCAGCTACCTCGCCCACCTaGGCCGCCGCCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPATSPT*AAACRS
Trigger: GGACCTGCAGGCGGCGGCGCAGGTGGGCGAGGTAGC...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGGGACCACTAGCCCCAGCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTAGCAGTAGGCCACGGCTaGCGCGCAGTCCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LGPLAPASTAEGLGPGPLAVGHG*RAVLRL
Trigger: GAGCCGGAGGACTGCGCGGCAGCCGTGGCCTACTGC...TAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGCTGGGGCTAGTGGTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCAGGTGGCTGTACAGGTaGAGACAGCAAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGRWLYR*RQQGCG
Trigger: GCCGCAGCCTTGCTGTCTGCACCTGTACAGCCACCT...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGGGGGCACCATTCAGCTaGAGGAGCCGCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FLVAASAQAGLGVQVWALGAPFS*RSRRRR
Trigger: CCGCCTCCTGCGGCTCCTGCAGCTGAATGGTGCCCC...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGAGGTTGGTGAGCCTCTaGAGTTGGGCGGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPRLVSL*SWAEVS
Trigger: ACTGACTTCCGCCCAACTGCAGAGGCTCACCAACCT...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGGTCCCGGCACTCCACTaGTGGGACCCCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: EARPSIVPASGYACRLKMVPALH*WDPLPD
Trigger: GTCTGGAAGGGGGTCCCAGCAGTGGAGTGCCGGGAC...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAATGGCACTGTTTGGGCTaGAGTGCTGACCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAEWHCLG*SADLSP
Trigger: CGGGCTGAGGTCAGCACTGCAGCCCAAACAGTGCCA...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGGCACTGTTTGGGCTaGAGTGCTGACCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGWHCLG*SADLSP
Trigger: CGGGCTGAGGTCAGCACTGCAGCCCAAACAGTGCCA...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCGTCCTCCCTCGGAGCTaGTCCAACTGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFVLPRS*SNCSCR
Trigger: TCTGCAGCTGCAGTTGGAGCAGCTCCGAGGGAGGAC...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCCCAGGCCCTCGATCGTaGCCGCCTCCGGGTATGCCT +
Preference number: 4 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPPGPRS*PPPGMP
Trigger: AGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGG...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGATGGGGTGGTACCAGTaGTCCCGCGGAGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: EARPSIVPASGYACRLKMMGWYQ*SRGGGT
Trigger: GGTGCCACCTCCGCGGGAGCACTGGTACCACCCCAT...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAACGACTTCGTGGAGGCTaGTGCGCAGAAGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAERLRGG*CAEAAT
Trigger: TGTGGCTGCTTCTGCGCACCAGCCTCCACGAAGTCG...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGGCACGTGGAGCACCTTaGCGGGCAGTTGCGCCAACG +
Preference number: 4 (lower is better)
Translates to: EARPSIVPASGYACRLKMARGAP*RAVAPT
Trigger: CGTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGC...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACTCCAGGTGGATGCGATaGCGACAACCGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHSRWMR*RQPGPG
Trigger: GCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGA...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCTCCAGGTGGATGCGATaGCGACAACCGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVSRWMR*RQPGPG
Trigger: GCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGA...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCTGCGCAGGCCGGCCTTaGAGTCCAGGTCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLGLGWPGAPQPQGILACCAGRP*SPGLGP
Trigger: AGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCA...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCCGATGCAGGCCTTaGCCAAATACCAATGACAGG +
Preference number: 4 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQASRCRP*PNTNDR
Trigger: CCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGA...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCCCCTCCGGGAACGCTaGTGCCCACGATGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSPLRER*CPRWPP
Trigger: AGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGAGAGCAGCCATTTGGTaGCCCCATAACAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGRAAIW*PHNKSH
Trigger: GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCT...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCAGCGCACCCATGCTCTTaGGATGGTGGCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: AAAPHAATAASASGWGRPAHPCS*DGGTTV
Trigger: CACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGC...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGCCTGCGACGGCTCCGTaGAAGTCAACTCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGPATAP*KSTHSF
Trigger: AAAAGAATGAGTTGACTTTCACGGAGCCGTCGCAGG...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCTCAGCCACAGCAGGCTaGGGTTGGGCCTCAGAATTG +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFSATAG*GWASEL
Trigger: CAATTCTGAGGCCCAACCTCAGCCTGCTGTGGCTGA...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTGAGACAAGGCCTCGCTaGGGCTGGCTGCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSETRPR*GWLPHG
Trigger: TCCATGGGGCAGCCAGCCTCAGCGAGGCCTTGTCTC...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323662.9
CDS-3UTR TCA 90 bp AGGCCCAGCCCGTGCAGCAGCTTCTTGAGCTCTGGCCGGCAGTGCACGGGAGAGCGTGCAGCAGCTTCTTaGGCTCTGGCCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RPSPCSSFLSSGRQCTGERAAAS*ALAGSA
Trigger: TGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACG...CTCTCCCGTGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGGGCTGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGACCCTCCGACGATGGATaGGAGACAAGGCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRPSDDG*ETRPRC
Trigger: GCAGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGG...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGCAGCCGTCTTCCTTGTaGAGGTGCAGGCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQQPSSL*RCRRPA
Trigger: CGCGGGCCGCCTGCACCTGCACAAGGAAGACGGCTG...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCAACACCATCCGGATCTaGCAGTCAGCCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFNTIRI*QSASHT
Trigger: GGTGTGGGAGGCTGACTGGCAGATCCGGATGGTGTT...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCGTAGCGTCCCGTCCTaGGAGGCCGACAACACCAGG +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHRSVPS*EADNTR
Trigger: CCTGGTGTTGTCGGCCTCGCAGGACGGGACGCTACG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGCCTGCAGGTCCCAGGTaGGTAGCGTCCCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQPAGPR*VASRPA
Trigger: CGCAGGACGGGACGCTACGCACCTGGGACCTGCAGG...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGAACGCGGGCGCCACCTaGACGTGGAGCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQNAGAT*TWSTLA
Trigger: CGCCAAGGTGCTCCACGTGCAGGTGGCGCCCGCGTT...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCACCGGGCCCGGGCTGTaGGCCTCCGTTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVTGPGL*ASVWKT
Trigger: TGTCTTCCAAACGGAGGCGCACAGCCCGGGCCCGGT...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAAGCTGTTCCAGGTGGATaGGATGGCGACAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKEAVPGG*DGDNRA
Trigger: GGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGC...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAGGTCTCCACTGTTGCTaGAGAAAGCCAGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAEGLHCC*RKPGPE
Trigger: CTCAGGCCCTGGCTTTCTGCAGCAACAGTGGAGACC...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCGGTCTCCACTGTTGCTaGAGAAAGCCAGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFGLHCC*RKPGPE
Trigger: CTCAGGCCCTGGCTTTCTGCAGCAACAGTGGAGACC...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGTCCCGGCACTCCACTaGTGGGACCCCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGVPALH*WDPLPD
Trigger: GTCTGGAAGGGGGTCCCAGCAGTGGAGTGCCGGGAC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCATGTACGAGCAGGCCCTaGAGCTGGCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: AAAPHAATAASASGWGRPCTSRP*SWPWRS
Trigger: TGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACA...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACAGCGAACTCCGCTGCTaGGCCCGCAGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHSELRC*ARSCSQ
Trigger: CTGTGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCT...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTGTCACCGGGCCTGTGTaGCCCACGAACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSVTGPV*PTNTIR
Trigger: CCGGATGGTGTTCGTGGGCCACACAGGCCCGGTGAC...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCCCAGCCCGTGCAGCAGCTTCTTGAGCTCTGGCCGGCAGTGCACGGGAGAGCTCCTGGCTCATCAGTaGCAGCGGAGGGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: RPSPCSSFLSSGRQCTGELLAHQ*QRRVVH
Trigger: GTGGACGACCCTCCGCTGCCACTGATGAGCCAGGAG...CTCTCCCGTGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGGGCTGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAATTGTCAAAGCCTTCCTaGCGCTGCTGCCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAELSKPS*RCCQEG
Trigger: ACCCTCCTGGCAGCAGCGCCAGGAAGGCTTTGACAA...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGCCGGCACTCCACTGCTaGGACCCCCTTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: FLVAASAQAGLGVQVWALPALHC*DPLPDC
Trigger: GCAGTCTGGAAGGGGGTCCCAGCAGTGGAGTGCCGG...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGAGTAGCACCGCGGAGTTaGGCACATAGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRVAPRS*AHSRGS
Trigger: GCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTAC...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCCCAGCCCGTGCAGCAGCTTCTTGAGCTCTGGCCGGCAGTGCACGGGAGAGGATGAGGGTGGGTCCTaGCAACCTTGCAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RPSPCSSFLSSGRQCTGEDEGGS*QPCSCA
Trigger: GGCGCAGCTGCAAGGTTGCCAGGACCCACCCTCATC...CTCTCCCGTGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGGGCTGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CCAGGAATCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCGTGCTCCCGCGGAGGTaGCACCACCATGTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PGIQLLVGVRAQGSQGPVVLPRR*HHHVGH
Trigger: GTGCCCGACATGGTGGTGCCACCTCCGCGGGAGCAC...GACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCCTGCAGCCGGAGGATaGGGTGGTACCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHPAAGG*GGTSAP
Trigger: GGGAGCACTGGTACCACCCCATCCTCCGGCTGCAGG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACAGAGCCGGGACCGCATaGGGCCCCTCAGTCTCATCG +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHRAGTA*GPSVSS
Trigger: CGATGAGACTGAGGGGCCCCATGCGGTCCCGGCTCT...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGAGGCTGGGGCAGAGGCTaGGACAAGGACCAACCCCAA +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRGWGRG*DKDQPQ
Trigger: TTGGGGTTGGTCCTTGTCCCAGCCTCTGCCCCAGCC...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTAGGTGGGATGCTGGGTaGCATGCCAGTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSRWDAG*HASGLG
Trigger: CCCCAGCCCACTGGCATGCCACCCAGCATCCCACCT...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGATCTCTCTCTCCACTCTaGGGGTCCCGGCACTCCACT +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRSLSPL*GSRHST
Trigger: AGTGGAGTGCCGGGACCCTCAGAGTGGAGAGAGAGA...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGTGGGATCGGCACTGTaGCTCGGGGAGACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDVGSAL*LGETGR
Trigger: TCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCAC...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCAAGCCCTCTGGGTCCTaGAGGCCCAGCCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTKPSGS*RPSPCS
Trigger: GCTGCACGGGCTGGGCCTTCAGGACCCAGAGGGCTT...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATTCTCGGAGAGCACTCTaGGACGGAGCTGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDSRRAL*DGAEGS
Trigger: GGACCCCTCAGCTCCGTCTCAGAGTGCTCTCCGAGA...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTAGTGGTTCCAGCCCATaGGTCAGGCGCGCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGSGSSP*VRRAAR
Trigger: GCGCGCGGCGCGCCTGACGCATGGGCTGGAACCACT...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATCCACCTGAACGGAACTaGCAGAGCGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDPPERN*QSARLL
Trigger: CAGCAGCCTGGCGCTCTGGCAGTTCCGTTCAGGTGG...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCGAGATGGTGGTTTTGTaGAAATCCCGGCGCACATCT +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPAEMVVL*KSRRTS
Trigger: AGATGTGCGCCGGGATTTGCACAAAACCACCATCTC...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGGGACCACTAGCCCCAGCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTACGTAGCGTCCCGTCCTaGGAGGCCGACAACACCAGG +
Preference number: 4 (lower is better)
Translates to: LGPLAPASTAEGLGPGPLRSVPS*EADNTR
Trigger: CCTGGTGTTGTCGGCCTCGCAGGACGGGACGCTACG...TAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGCTGGGGCTAGTGGTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCAAACGCGGGCGCCACCTaGACGTGGAGCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPNAGAT*TWSTLA
Trigger: CGCCAAGGTGCTCCACGTGCAGGTGGCGCCCGCGTT...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGTAGGCAGCGACTGGTaGGCAGGCGCGGGCAACGCG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTVGSDW*AGAGNA
Trigger: CGCGTTGCCCGCGCCTGCGCACCAGTCGCTGCCTAC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTGTAGGCAGCGACTGGTaGGCAGGCGCGGGCAACGCG +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGVGSDW*AGAGNA
Trigger: CGCGTTGCCCGCGCCTGCGCACCAGTCGCTGCCTAC...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGGCGGGCACACGCGGTaGAGCACGCTCATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTGGHTR*STLMGQ
Trigger: CTGCCCCATGAGCGTGCTGCACCGCGTGTGCCCGCC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCAAGCCTTCCTGGCGCTaGTGCCAGGAGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGKPSWR*CQEGGG
Trigger: GCCCCCACCCTCCTGGCAGCAGCGCCAGGAAGGCTT...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGACAGGTCTTGCGCCCTaGCAGGCCACACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGTGLAP*QATQGR
Trigger: TCTGCCCTGTGTGGCCTGGCAGGGCGCAAGACCTGT...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTCCTGCGCACCCATaGTCTTGGGATGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDGPAHP*SWDGGT
Trigger: GGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACC...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCCAGGCACAGGTGGGATaGTGGGTGGCATGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSCWLECGLREAKAQSSSQAQVG*WVACQW
Trigger: CCACTGGCATGCCACCCAGCATCCCACCTGTGCCTG...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCCAATGCTGTTCCAGGTaGATGCGATGGCGACAACCG +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFQCCSR*MRWRQP
Trigger: CGGTTGTCGCCATCGCATCCACCTGGAACAGCATTG...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCTCCTGGCTCATCAGTaGCAGCGGAGGGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSLLAHQ*QRRVVH
Trigger: GTGGACGACCCTCCGCTGCCACTGATGAGCCAGGAG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCGAAGTCAGTGACTCCTaGCTCATCAGTGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFEVSDS*LISGSG
Trigger: TCCGCTGCCACTGATGAGCCAGGAGTCACTGACTTC...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCCCTACGGTGGGTGGGTaGGATCGGCACTGTGACTCG +
Preference number: 4 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPPTVGG*DRHCDS
Trigger: CGAGTCACAGTGCCGATCCCACCCACCCACCGTAGG...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGTAGCACCGCGGAGTTaGGCACATAGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGVAPRS*AHSRGS
Trigger: GCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTAC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGAACCACAGGGCATCCTaGCTTGCCCCTGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: FLVAASAQAGLGVQVWALNHRAS*LAPGSA
Trigger: TGCGGAGCCAGGGGCAAGCCAGGATGCCCTGTGGTT...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GCAAGACAGTGGGCAGCTTGGGGTACAGCACACACATCCCGGGTCTCTCTCTCCCGCCGCCGGGGCTCCTaGGTCCAGTCCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: ARQWAAWGTAHTSRVSLSRRRGS*VQSTAL
Trigger: GAGTGCTGTGGACTGGACCCAGGAGCCCCGGCGGCG...GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCAGCATCCGCTGGGCCTaGAGCTCCGGGGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSCWLECGLREAKAQSSSSIRWA*SSGAKE
Trigger: CTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGCT...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTGGTGCCAGCATCCGCTaGGCCTGGAGCTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGGASIR*AWSSGA
Trigger: AGCCCCGGAGCTCCAGGCCCAGCGGATGCTGGCACC...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGGTGCCAGCATCCGCTaGGCCTGGAGCTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTGASIR*AWSSGA
Trigger: AGCCCCGGAGCTCCAGGCCCAGCGGATGCTGGCACC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGCGCAGCCTTCTCCTaGAGCGAACTCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSCAAFS*SELRCC
Trigger: GCAGCAGCGGAGTTCGCTCCAGGAGAAGGCTGCGCA...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCTCCACACCAGGCTGTaGGCTGGCCCAGGACACGTT +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHLHTRL*AGPGHV
Trigger: AACGTGTCCTGGGCCAGCCCACAGCCTGGTGTGGAG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGCATGCAGATCGAAGGTaGGCACGGCCGAGCCATAGG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGHADRR*ARPSHR
Trigger: CCTATGGCTCGGCCGTGCTCACCTTCGATCTGCATG...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCCATGCAGATCGAAGGTaGGCACGGCCGAGCCATAGG +
Preference number: 4 (lower is better)
Translates to: SSCWLECGLREAKAQSSSHADRR*ARPSHR
Trigger: CCTATGGCTCGGCCGTGCTCACCTTCGATCTGCATG...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGCGCCTTCGAGATCCGTaGGGTGGCTGTACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGRLRDP*GGCTGA
Trigger: TGCACCTGTACAGCCACCTCACGGATCTCGAAGGCG...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCGCCTTCGAGATCCGTaGGGTGGCTGTACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSRLRDP*GGCTGA
Trigger: TGCACCTGTACAGCCACCTCACGGATCTCGAAGGCG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGCAGAAAGCCAGGGCCTaGGGGGCACCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQQKARA*GAPFSC
Trigger: GCAGCTGAATGGTGCCCCTCAGGCCCTGGCTTTCTG...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp CCAGGAATCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGGTAGTGGCTCAGTaGGGAGCGGGCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PGIQLLVGVRAQGSQGPVQVVAQ*GAGQKL
Trigger: CAGCTTCTGGCCCGCTCCTCACTGAGCCACTACCTG...GACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGGTGCGGCTCCGCAGGTaGGACCACCATCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQVRLRR*DHHQRH
Trigger: GTGCCTTTGATGGTGGTCTCACCTGCGGAGCCGCAC...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp CTGGGACCACTAGCCCCAGCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTAGCCTTGGCCACTCTGTaGCCCAGCAGCTGCAGGACT +
Preference number: 4 (lower is better)
Translates to: LGPLAPASTAEGLGPGPLALATL*PSSCRT
Trigger: AGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGC...TAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGCTGGGGCTAGTGGTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACACCTGCGCCGCCGCCTaGAGGTCCCAGGTGCGTAGC +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHTCAAA*RSQVRS
Trigger: GCTACGCACCTGGGACCTGCAGGCGGCGGCGCAGGT...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGGCGGGCACACGCGGTaGAGCACGCTCATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGGGHTR*STLMGQ
Trigger: CTGCCCCATGAGCGTGCTGCACCGCGTGTGCCCGCC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCCACCCGAAGACACAATaGTGTTCCAGGTGGATGCGA +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGHPKTQ*CSRWMR
Trigger: TCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTG...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACAGCAGCAGGAGAAGGTaGGCAGCAGGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHSSRRR*AAGSGS
Trigger: AGAGCCTGAGCCTGCTGCGCACCTTCTCCTGCTGCT...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAACCAGGTCTCCACTGTTaGTGCAGAAAGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKEPGLHC*CRKPGP
Trigger: AGGCCCTGGCTTTCTGCAGCAACAGTGGAGACCTGG...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGGGACCACTAGCCCCAGCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTACCCTTCCAGACTGCATaGCCAGCAGGCCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LGPLAPASTAEGLGPGPLPFQTA*PAGQSR
Trigger: ACGGCTCTGGCCTGCTGGGCATGCAGTCTGGAAGGG...TAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGCTGGGGCTAGTGGTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCTGGGATGCCTTGCTGTaGACCCTACGGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PLGLGWPGAPQPQGILACWDALL*TLRWVG
Trigger: ACCCACCCACCGTAGGGTGCACAGCAAGGCATCCCA...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGGCCAGAAGCTGGGATaGCTTGCTGTGCACCCTACG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGGQKLG*LAVHPT
Trigger: CGTAGGGTGCACAGCAAGGCATCCCAGCTTCTGGCC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAACAGCGAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCGCATTTAGCCACATCTaGTGTAGCACCGCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PTARPGPRSCPPPGMPAGAFSHI*CSTAEL
Trigger: CAACTCCGCGGTGCTACAGCAGATGTGGCTAAATGC...GCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGTCCCAGGAATCCAGCTaGTGGTTGGAGTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGSQESS*WLECGL
Trigger: GAGCCCGCACTCCAACCAGCAGCTGGATTCCTGGGA...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCTCCCAGGAATCCAGCTaGTGGTTGGAGTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVSQESS*WLECGL
Trigger: GAGCCCGCACTCCAACCAGCAGCTGGATTCCTGGGA...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCAGGAGCAGCTGCAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGTGGCAACCTTGCAGCTaGGCCGCCGGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQEQLQRQYHELLLCLVLWQPCS*AAGAPG
Trigger: CCCAGGAGCCCCGGCGGCGCAGCTGCAAGGTTGCCA...CAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCAGGAGCAGCTGCAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGGGGTCCTGGCAACCTTaGAGCTGCGCCGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQEQLQRQYHELLLCLVLGSWQP*SCAAGA
Trigger: AGCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCC...CAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCGCCCGCCTCCGGGTATaGCTGCAGGCTGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWAARLRV*LQAEDG
Trigger: CCCATCTTCAGCCTGCAGGCATACCCGGAGGCGGGC...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCAGGCCGACCAGGAGGTaGCCGAGGGTATCACGGAGG +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGRPTRR*PRVSRR
Trigger: CCTCCGTGATACCCTCGGGCACCTCCTGGTCGGCCT...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCAGAGCCTCCCGAAGATaGCGGAGGCCGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTRASRR*RRPTRR
Trigger: CCTCCTGGTCGGCCTCCGGCATCTTCGGGAGGCTCT...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATCTGGCGGGTGTGGGTaGGCAGCCTTCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPSGGCG*AAFSWS
Trigger: GCTCCAGGAGAAGGCTGCGCACCCACACCCGCCAGA...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCTCCAGGGGGAAAGGCTaGGGCTCCACACGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGSRGKG*GSTRGN
Trigger: GTTGCCGCGTGTGGAGCCGCAGCCTTTCCCCCTGGA...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGACAGGTCTTGCGCCCTaGCAGGCCACACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQTGLAP*QATQGR
Trigger: TCTGCCCTGTGTGGCCTGGCAGGGCGCAAGACCTGT...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCACTTTCCCCTGCCTTTaGTGTCTTGGAGATAGCCAT +
Preference number: 4 (lower is better)
Translates to: PGTLVPTMATSARPPAPATFPCL*CLGDSH
Trigger: ATGGCTATCTCCAAGACAGCAAAGGCAGGGGAAAGT...GGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTCAGCGTCCGGATGGGGCCGTCCAGGGTGCGGCCCGCACAGAGCCGGGACCGACTTTCCCCTGCCTTTaGTGTCTTGGAGATAGCCAT +
Preference number: 4 (lower is better)
Translates to: LQRPDGAVQGAARTEPGPTFPCL*CLGDSH
Trigger: ATGGCTATCTCCAAGACAGCAAAGGCAGGGGAAAGT...CGGTCCCGGCTCTGTGCGGGCCGCACCCTGGACGGCCCCATCCGGACGCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCCAGCGCAGGACGTGGTaGGGAGGAACCGGCGCCACA +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTQRRTW*GGTGAT
Trigger: TGTGGCGCCGGTTCCTCCCCACCACGTCCTGCGCTG...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCGTCACCGGGCCTGTGTaGCCCACGAACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTVTGPV*PTNTIR
Trigger: CCGGATGGTGTTCGTGGGCCACACAGGCCCGGTGAC...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACGTAGGTAGCGCTGTCTaGGTCCTCAAAGCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHVGSAV*VLKARG
Trigger: ACCGCGGGCTTTGAGGACCCAGACAGCGCTACCTAC...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGTCGTCCTGGGGCCGGTaGTCTAATCGCGGACTGTCG +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQSSWGR*SNRGLS
Trigger: CGACAGTCCGCGATTAGACCACCGGCCCCAGGACGA...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGAGGCTGGCTGCCCCATaGAGGTTGGTGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQRLAAP*RLVSLC
Trigger: GCAGAGGCTCACCAACCTCCATGGGGCAGCCAGCCT...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAACTTGTCCCATCTCTTTaGCAGCAGTGGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAELVPSL*QQWDPA
Trigger: TGCAGGATCCCACTGCTGCCAAAGAGATGGGACAAG...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGTCCTCCAGTTTCTGGTaGCAGCAAGTGCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGSSSFW*QQVRRP
Trigger: CGGCCTGCGCACTTGCTGCCACCAGAAACTGGAGGA...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACTCAGTGCCCAGCGGATaGTACCCCGCTATGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHSVPSG*YPAMGL
Trigger: GAGACCCATAGCGGGGTACCATCCGCTGGGCACTGA...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGCGCACCCATGCTCTTaGGATGGTGGCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGAHPCS*DGGTTV
Trigger: CACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCCTGGGCCCAGCAACTTaGCTGTCCCGCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTLGPAT*LSRTVL
Trigger: CAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAG...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGGCACAGGTGGGATGCTaGGTGGCATGCCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQAQVGC*VACQWA
Trigger: AGCCCACTGGCATGCCACCCAGCATCCCACCTGTGC...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCACAGAAAGCCAGGGCCTaGGGGGCACCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPQKARA*GAPFSC
Trigger: GCAGCTGAATGGTGCCCCTCAGGCCCTGGCTTTCTG...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGAAGCCCTCTGGGTCCTaGAGGCCCAGCCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLKPSGS*RPSPCS
Trigger: GCTGCACGGGCTGGGCCTTCAGGACCCAGAGGGCTT...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCATTTGCCACTGTTGGCTaGTGGTCAAAAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AAAPHAATAASASGWGRPFATVG*WSKRAG
Trigger: TCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAA...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCCTTCGTGGAGGCTGGTaGGCAGAAGCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGLRGGW*AEAATA
Trigger: GGCTGTGGCTGCTTCTGCGCACCAGCCTCCACGAAG...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAGGAATCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCAGCGTCTCCTGTaGCCAGCCGTCTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGIQLLVGVRAQGSQGPVQQRLL*PAVFLV
Trigger: CACAAGGAAGACGGCTGGGCACAGGAGACGCTGCTG...GACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCACCACCTGAACGGAACTaGCAGAGCGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPPPERN*QSARLL
Trigger: CAGCAGCCTGGCGCTCTGGCAGTTCCGTTCAGGTGG...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCAGGAAGCTGTCACCATTaGCTCTACTTCCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: AAAPHAATAASASGWGRPGSCHH*LYFLAV
Trigger: TACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCC...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GCAAGACAGTGGGCAGCTTGGGGTACAGCACACACATCCCGGGTCTCTCTCTCCCGCAGGCCACAGAGCTaGAGCGCAACTCGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: ARQWAAWGTAHTSRVSLSRRPQS*SATRPS
Trigger: ACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCG...GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTCTCAGCAGTCCAGATaGGAACGGTGCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSSQQSR*ERCSPG
Trigger: GCCTGGACTGCACCGTTCGCATCTGGACTGCTGAGA...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCCTCGCTGAGGCTGGCTaGCCCATGGAGGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTLAEAG*PMEVGE
Trigger: CTCACCAACCTCCATGGGGCAGCCAGCCTCAGCGAG...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323662.9
CDS-3UTR GCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGACAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAG +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRQVLRC*PPTMDE
Trigger: CTCATCCATCGTCGGAGGGCAACATCTCAGCACCTG...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAAAGCCTTCCTGGCGCTaGTGCCAGGAGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERKPSWR*CQEGGG
Trigger: GCCCCCACCCTCCTGGCAGCAGCGCCAGGAAGGCTT...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCGACCCCCTTCCAGACTaGATGCCCAGCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTDPLPD*MPSRPE
Trigger: CTCTGGCCTGCTGGGCATGCAGTCTGGAAGGGGGTC...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCGGAGCTGCTCCAACTaGAGCTGCAGATCCAGACTG +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSRSCSN*SCRSRL
Trigger: CAGTCTGGATCTGCAGCTGCAGTTGGAGCAGCTCCG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATCGGAGCTGCTCCAACTaGAGCTGCAGATCCAGACTG +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDRSCSN*SCRSRL
Trigger: CAGTCTGGATCTGCAGCTGCAGTTGGAGCAGCTCCG...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGAGTGGGATCCTGCACTaGAAGTGGGAGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGSGILH*KWEDGR
Trigger: CCTGCCATCCTCCCACTTGCAGTGCAGGATCCCACT...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCAGTGGGATCCTGCACTaGAAGTGGGAGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLGLGWPGAPQPQGILACSGILH*KWEDGR
Trigger: CCTGCCATCCTCCCACTTGCAGTGCAGGATCCCACT...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCCAGTGCTTGTGGGGCTaGACGGTGGCAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPQCLWG*TVAGKK
Trigger: CTTCTTTCCTGCCACCGTGCAGCCCCACAAGCACTG...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGCAGGCCAGGAGCAGCTaGAGCGCCAGTATCACGAAC +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQQARSS*SASITN
Trigger: GTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCCTG...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CAAATACCAATGACAGGCCCCAGAGCCAGGCGGGCTGAGGCCACCAGTCCGGTCGGCACCTCTGAGACCTaGGAGAGCCTCCCGAAGATG +
Preference number: 4 (lower is better)
Translates to: QIPMTGPRARRAEATSPVGTSET*ESLPKM
Trigger: CATCTTCGGGAGGCTCTCGCAGGTCTCAGAGGTGCC...GACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTGGGGCCTGTCATTGGTATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCAGCTGCGCTTGGGTaGCAGCATCCGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQPAALG*QHPLGL
Trigger: CAGGCCCAGCGGATGCTGGCACCCAAGCGCAGCTGG...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACGGCGCCACCTGCACGTaGAGCACCTTGGCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHGATCT*STLAGS
Trigger: ACTGCCCGCCAAGGTGCTCCACGTGCAGGTGGCGCC...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCGCGTAGGCAGCGACTaGTGCGCAGGCGCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCRVGSD*CAGAGN
Trigger: GTTGCCCGCGCCTGCGCACCAGTCGCTGCCTACGCG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCAACTCGCCCCAGTGCTaGCGCACGATCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWANSPQC*RTISQE
Trigger: CTCCTGGGAGATCGTGCGCCAGCACTGGGGCGAGTT...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCTCGTCCTGGGGCCGGTaGTCTAATCGCGGACTGTCG +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGSSWGR*SNRGLS
Trigger: CGACAGTCCGCGATTAGACCACCGGCCCCAGGACGA...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCAGGCTGGCTGCCCCATaGAGGTTGGTGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGRLAAP*RLVSLC
Trigger: GCAGAGGCTCACCAACCTCCATGGGGCAGCCAGCCT...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGTTGCCCTCCGACGATaGATGAGAGACAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGVALRR*MRDKAS
Trigger: CGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAAC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGAAGACAGTGGGCAGCTTaGGGTACAGCACACACATCC +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRRQWAA*GTAHTS
Trigger: GGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCT...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACTGGGGACAGGGCTGTTaGCACTGTTTGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHWGQGC*HCLGCS
Trigger: ACTGCAGCCCAAACAGTGCCAACAGCCCTGTCCCCA...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCCTGTGCACCCTACGGTaGGTGGGTGGGATCGGCACT +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGLCTLR*VGGIGT
Trigger: AGTGCCGATCCCACCCACCCACCGTAGGGTGCACAG...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCGAGCGGGCCAGAAGCTaGGATGCCTTGCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWAERARS*DALLCT
Trigger: GGTGCACAGCAAGGCATCCCAGCTTCTGGCCCGCTC...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCAACCACAGGGCATCCTaGCTTGCCCCTGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTNHRAS*LAPGSA
Trigger: TGCGGAGCCAGGGGCAAGCCAGGATGCCCTGTGGTT...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTGAAGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTCCTTCGGCACCAGCAGGAATCCAGCTGCTaGTTGGAGTGCGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LKVSVPGHYGVQVLLRHQQESSC*LECGLR
Trigger: CCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTG...CTGGTGCCGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCCACGGTCGACCCACGTaGTCTTCTCCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTHGRPT*SSPAGP
Trigger: TGGCCCTGCTGGAGAAGACCACGTGGGTCGACCGTG...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGACGGACCTCTGCGGCTTaGCCTCCTGCAGCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERRTSAA*PPAAGG
Trigger: TCCTCCGGCTGCAGGAGGCCAAGCCGCAGAGGTCCG...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGCCCCTCCGGGAACGCTaGTGCCCACGATGGCCACCT +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGPLRER*CPRWPP
Trigger: AGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGG...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGAGCCACCGCACAGTTTaGGGTGACAGGGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGSHRTV*GDREGV
Trigger: CACACCTTCCCTGTCACCCCAAACTGTGCGGTGGCT...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGACGGCTCCAGCAGCAGTaGGCTCACTATGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERRLQQQ*AHYAPG
Trigger: ACCGGGCGCATAGTGAGCTCACTGCTGCTGGAGCCG...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCCAGGTAGTGGCTCAGTaGGGAGCGGGCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTQVVAQ*GAGQKL
Trigger: CAGCTTCTGGCCCGCTCCTCACTGAGCCACTACCTG...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGGGGCTGGTCCAGGTTaGGCAAGTGTACGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTGAGPG*ASVRAG
Trigger: GCCTGCTCGTACACTTGCTCAACCTGGACCAGCCCC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCTGCCCCAGAGACCACTaGCGTCTGCGATGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTCPRDH*RLRWGL
Trigger: GAGACCCCATCGCAGACGTCAGTGGTCTCTGGGGCA...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGCCTTGGCCACTCTGTaGCCCAGCAGCTGCAGGACT +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTALATL*PSSCRT
Trigger: AGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGAAAAAGGGCAGGACCTaGGACGGCTCCGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: FLVAASAQAGLGVQVWALKKGRT*DGSVKV
Trigger: GACTTTCACGGAGCCGTCGCAGGTCCTGCCCTTTTT...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTACGAGAGTCCAGGCATaGAGATCGAAGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSTRVQA*RSKVST
Trigger: CGTGCTCACCTTCGATCTGCATGCCTGGACTCTCGT...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCCCCACACCTTCACGGTaGTGTCCCGGGAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTPTPSR*CPGKLS
Trigger: TGACAGCTTCCCGGGACAGCACCGTGAAGGTGTGGG...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGCAGTGAGCTCACTATaGGCCCGGTGGCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGAVSSL*ARWPPT
Trigger: TGTCGGCGGCCACCGGGCGCATAGTGAGCTCACTGC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGACGCAGGCCACAGAGCTaGAGCGCAACTCGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERRRPQS*SATRPS
Trigger: ACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCG...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAAGCGTGCCGTCCGTGTaGCCCACCACTGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERSVPSV*PTTGRY
Trigger: GTACCTGCCAGTGGTGGGGCACACGGACGGCACGCT...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCTCCAGATGCGAACGGTaGAGTCCAGGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGSRCER*SPGWSR
Trigger: CCTGCTCCAGCCTGGACTGCACCGTTCGCATCTGGA...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGCAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAG +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGQVLRC*PPTMDE
Trigger: CTCATCCATCGTCGGAGGGCAACATCTCAGCACCTG...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTGGCCTTGGAGATCACTaGTCATGTTGGGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSGLGDH*SCWAAV
Trigger: GACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCC...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCGGCCTTGGAGATCACTaGTCATGTTGGGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVGLGDH*SCWAAV
Trigger: GACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCC...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCCAGCTGCGCTTGGGTaGCAGCATCCGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCPAALG*QHPLGL
Trigger: CAGGCCCAGCGGATGCTGGCACCCAAGCGCAGCTGG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAAGCGAACTCCGCTGCTaGGCCCGCAGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERSELRC*ARSCSQ
Trigger: CTGTGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCT...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTCCAGGGGGAAAGGCTaGGGCTCCACACGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHSRGKG*GSTRGN
Trigger: GTTGCCGCGTGTGGAGCCGCAGCCTTTCCCCCTGGA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGCTATGGGTCTCCTCTaGCCTAGGCCGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGAMGLL*PRPATP
Trigger: AGGGGTGGCCGGCCTAGGGCAGAGGAGACCCATAGC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCGCCCCAAGAACTCTGTaGACAGGTCTTGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGAPRTL*TGLAPC
Trigger: GCAGGGCGCAAGACCTGTGCACAGAGTTCTTGGGGC...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCAGCGCAGGACGTGGTaGGGAGGAACCGGCGCCACA +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCQRRTW*GGTGAT
Trigger: TGTGGCGCCGGTTCCTCCCCACCACGTCCTGCGCTG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCACGTGGAGCACCTTaGCGGGCAGTTGCGCCAACG +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERARGAP*RAVAPT
Trigger: CGTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGC...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCTCGAGATCCGTGAGGTaGCTGTACAGGTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVSRSVR*LYRCRQ
Trigger: CTGTCTGCACCTGTACAGCCACCTCACGGATCTCGA...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCGTAGGTAGCGCTGTCTaGGTCCTCAAAGCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTVGSAV*VLKARG
Trigger: ACCGCGGGCTTTGAGGACCCAGACAGCGCTACCTAC...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCCACAGGCCAGTGATGTaGTCCGTGGGGTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTHRPVM*SVGSSW
Trigger: CCAGGACGACCCCACGGACCACATCACTGGCCTGTG...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCGTCGTCCACCACGTCTaGGGCCTTCCGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGVVHHV*GLPAHL
Trigger: AAGATGTGCCGGAAGGCCCCAGACGTGGTGGACGAC...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTGCCCGGGCAAGACAGTaGGCAGCTTGGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGARARQ*AAWGTA
Trigger: TGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGC...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCCTGCAAGTGGGAGGATaGCAGGTCCAGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGLQVGG*QVQGHG
Trigger: ACCATGGCCCTGGACCTGCCATCCTCCCACTTGCAG...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAATCTCTTTGGCAGCAGTaGGATCCTGCACTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKESLWQQ*DPALQV
Trigger: CACTTGCAGTGCAGGATCCCACTGCTGCCAAAGAGA...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCAGCTTCCTCTGCCACTaGGTTTGGGATGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGSFLCH*VWDGLG
Trigger: CCCCAGGCCATCCCAAACCCAGTGGCAGAGGAAGCT...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTCACGGTCGACCCACGTaGTCTTCTCCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGHGRPT*SSPAGP
Trigger: TGGCCCTGCTGGAGAAGACCACGTGGGTCGACCGTG...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTCCCTGCAGCTGGCCTTaGAGATCACTGCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSPCSWP*RSLLML
Trigger: CAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGG...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTTGCGCAGGCCGGCCTTaGAGTCCAGGTCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCCAGRP*SPGLGP
Trigger: AGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCA...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCTCCTCCAGTTTCTGGTaGCAGCAAGTGCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGSSSFW*QQVRRP
Trigger: CGGCCTGCGCACTTGCTGCCACCAGAAACTGGAGGA...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACATGTCCTCCAGTTTCTaGTGGCAGCAAGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHMSSSF*WQQVRR
Trigger: CCTGCGCACTTGCTGCCACCAGAAACTGGAGGACAT...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCGGACCTCTGCGGCTTaGCCTCCTGCAGCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPRTSAA*PPAAGG
Trigger: TCCTCCGGCTGCAGGAGGCCAAGCCGCAGAGGTCCG...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCAGGGTCCGCGTCCGCTaGCAGAAAGTAGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTRVRVR*QKVALQ
Trigger: CTGCAGCGCTACTTTCTGCCAGCGGACGCGGACCCT...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCTCAGTGCCCAGCGGATaGTACCCCGCTATGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGSVPSG*YPAMGL
Trigger: GAGACCCATAGCGGGGTACCATCCGCTGGGCACTGA...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCCACCAGGCTGTGGGCTaGCCCAGGACACGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGHQAVG*PRTRSL
Trigger: TAGAGAACGTGTCCTGGGCCAGCCCACAGCCTGGTG...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GAGGCCAGGCCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGCTGAAGATGATGCTCTTGGGATGGTaGCACCACTGTGTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: EARPSIVPASGYACRLKMMLLGW*HHCVKH
Trigger: GTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT...CATCTTCAGCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGACTGGGCCCAGCAACTTaGCTGTCCCGCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERLGPAT*LSRTVL
Trigger: CAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAG...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CAA 72 bp AGTGCTGACCTCAGCCCGGGCAAGACAGTGGGCAGCTaGGGGTACAGCACACACATCCCGGGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SADLSPGKTVGS*GYSTHIPGLSL
Trigger: GAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGCTGAGGTCAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCAGCAGGCATACAGTTTaGGCGTGGGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWASRHTV*AWGSST
Trigger: TGTGCTGCTGCCCCACGCTCAAACTGTATGCCTGCT...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGAGAGATGGTGGTTTTGTaGAAATCCCGGCGCACATCT +
Preference number: 4 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVREMVVL*KSRRTS
Trigger: AGATGTGCGCCGGGATTTGCACAAAACCACCATCTC...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGGCCACAGCTGCATGCTaGTCGCGCACAGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQATAAC*SRTGTA
Trigger: TGCTGTCCCTGTGCGCGAGCAGCATGCAGCTGTGGC...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCCAGGAGCAGCTGCAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGGCCACAGCTGCATGCTaGTCGCGCACAGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GQEQLQRQYHELLLCLVLATAAC*SRTGTA
Trigger: TGCTGTCCCTGTGCGCGAGCAGCATGCAGCTGTGGC...CAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACCACCCGAAGACACAATaGTGTTCCAGGTGGATGCGA +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHHPKTQ*CSRWMR
Trigger: TCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTG...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACACCTTCCTGGCGCTGCTaGCAGGAGGGTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTPSWRC*QEGGGW
Trigger: CCAGCCCCCACCCTCCTGGCAGCAGCGCCAGGAAGG...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGCCCTTCCAGACTGCATaGCCAGCAGGCCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLPFQTA*PAGQSR
Trigger: ACGGCTCTGGCCTGCTGGGCATGCAGTCTGGAAGGG...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGACCCCCTTCCAGACTaGATGCCCAGCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERDPLPD*MPSRPE
Trigger: CTCTGGCCTGCTGGGCATGCAGTCTGGAAGGGGGTC...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCAGCACCTGCAGGATGTaGACACGGTCGACCCACGTG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTSTCRM*TRSTHV
Trigger: CACGTGGGTCGACCGTGTGCACATCCTGCAGGTGCT...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTCTGGTGGCAGCAAGTaGGCAGGCCGGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHSGGSK*AGRPWS
Trigger: ACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGGCACCTCTGAGACCTaGGAGAGCCTCCCGAAGATG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTGTSET*ESLPKM
Trigger: CATCTTCGGGAGGCTCTCGCAGGTCTCAGAGGTGCC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGTCCGGGGCTAAAGAGTaGGGCTCCGCAGGTGAGACC +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLSGAKE*GSAGET
Trigger: GGTCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGA...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGCCCAAGTCCAGCAGCTaGGAGTGCGACCAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLPKSSS*ECDQSV
Trigger: GACCGACTGGTCGCACTCGCAGCTGCTGGACTTGGG...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCACTCCTGGTCTCACCTaGATCGACCCGGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGTPGLT*IDPEGS
Trigger: TGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGT...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGTGTCCCGCACGGTCCTaGGCACCCATGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLCPARS*APMLLG
Trigger: TCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACA...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCGGCAGGACTTTCCCCTaGCTTTGCTGTCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: SSCWLECGLREAKAQSSSGRTFP*LCCLGD
Trigger: ATCTCCAAGACAGCAAAGGCAGGGGAAAGTCCTGCC...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGGGACCACTAGCCCCAGCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTAGGTGTGATCTCTGCTTaGTGCAACCTCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGPLAPASTAEGLGPGPLGVISA*CNLHLL
Trigger: CAGGAGGTGGAGGTTGCAGCAAGCAGAGATCACACC...TAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGCTGGGGCTAGTGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACAGGCTTTGCCACTGTTaGCTGCTGGTCAAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHRLCHC*LLVKKG
Trigger: GCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCT...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGGGTCCCGGGCCACTATaGCGTCCAAGTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLGPGPL*RPSPPS
Trigger: CGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACC...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCTCTCTTTGGCAGCAGTaGGATCCTGCACTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVSLWQQ*DPALQV
Trigger: CACTTGCAGTGCAGGATCCCACTGCTGCCAAAGAGA...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGACTCAGGCAGTGCTTGTaGGGCTGCACGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERLRQCL*GCTVAG
Trigger: TCCTGCCACCGTGCAGCCCCACAAGCACTGCCTGAG...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GCAAGACAGTGGGCAGCTTGGGGTACAGCACACACATCCCGGGTCTCTCTCTCCAGCCGGGGAAGCAGATaGGCCTCAGGCAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARQWAAWGTAHTSRVSLSSRGSR*ASGSAC
Trigger: ACAAGCACTGCCTGAGGCCCATCTGCTTCCCCGGCT...GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCCACTGGGTTTGGGATaGCCTGGGGCGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHPLGLG*PGAPQP
Trigger: TGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTCAGGAATCCAGCTGCTaGTTGGAGTGCGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGQESSC*LECGLR
Trigger: CCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTG...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAAATGCAGAAACTTaGGCAGATGCCCGTAATGCT +
Preference number: 4 (lower is better)
Translates to: PTRRAHPGALQSRRHPAERNAET*ADARNA
Trigger: AGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCT...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTCTTGGAGTCCAGGTCTaGGCCCTGGACCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGLGVQV*ALDPGH
Trigger: ATGACCTGGGTCCAGGGCCCAGACCTGGACTCCAAG...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTAGAGCCGGGACCGCATaGGGCCCCTCAGTCTCATCG +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPRAGTA*GPSVSS
Trigger: CGATGAGACTGAGGGGCCCCATGCGGTCCCGGCTCT...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTCTGGTGGCAGCAAGTGCGCAGGCCGGCCTTGGAGTCCAGGTCTGGGCCCTGTCCCGATGCAGGCCTTaGCCAAATACCAATGACAGG +
Preference number: 4 (lower is better)
Translates to: FLVAASAQAGLGVQVWALSRCRP*PNTNDR
Trigger: CCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGA...CAGGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GCAAGACAGTGGGCAGCTTGGGGTACAGCACACACATCCCGGGTCTCTCTCTCCCACCAGGCTGTGGGCTaGCCCAGGACACGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ARQWAAWGTAHTSRVSLSHQAVG*PRTRSL
Trigger: TAGAGAACGTGTCCTGGGCCAGCCCACAGCCTGGTG...GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGACTCCACACCAGGCTGTaGGCTGGCCCAGGACACGTT +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERLHTRL*AGPGHV
Trigger: AACGTGTCCTGGGCCAGCCCACAGCCTGGTGTGGAG...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTAGAGCAGCCATTTGGTaGCCCCATAACAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSRAAIW*PHNKSH
Trigger: GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCT...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCCTTGGCCTTCTGCAGTaGGAGGATGCGGTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGLGLLQ*EDAVVP
Trigger: AGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCAAAATCAGAGGGCCTTaGCCACTCTGTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPKIRGP*PLCDPA
Trigger: TGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTT...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCCAGGAGCAGCTGCAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGAGGGACAGGCACAGGTaGGATGCTGGGTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: GQEQLQRQYHELLLCLVLRDRHR*DAGWHA
Trigger: GGCATGCCACCCAGCATCCCACCTGTGCCTGTCCCT...CAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCACAGTCCACAGCACTCTaGTCCTCCAGTTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPQSTAL*SSSSQE
Trigger: TTCCTGGGAACTGGAGGATCAGAGTGCTGTGGACTG...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTTCTCGGAGAGCACTCTaGGACGGAGCTGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPSRRAL*DGAEGS
Trigger: GGACCCCTCAGCTCCGTCTCAGAGTGCTCTCCGAGA...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCTCACAGAAGAAGTTaGGCGCGTCGATGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERAHRRS*ARRWGP
Trigger: TGGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGC...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGGCTCACAGAAGAAGTTaGGCGCGTCGATGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQAHRRS*ARRWGP
Trigger: TGGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGC...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCCTCATCGCACACCTGTaGACCTTGGCCTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTLIAHL*TLAFCS
Trigger: ACTGCAGAAGGCCAAGGTTCACAGGTGTGCGATGAG...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTTCGTGGAGGCTGGTaGGCAGAAGCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPLRGGW*AEAATA
Trigger: GGCTGTGGCTGCTTCTGCGCACCAGCCTCCACGAAG...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GCAAGACAGTGGGCAGCTTGGGGTACAGCACACACATCCCGGGTCTCTCTCTCCTCTCAGCAGTCCAGATaGGAACGGTGCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARQWAAWGTAHTSRVSLSSQQSR*ERCSPG
Trigger: GCCTGGACTGCACCGTTCGCATCTGGACTGCTGAGA...GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGAAGCTGGGATGCCTTaGTGTGCACCCTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGEAGMP*CAPYGG
Trigger: CCCACCGTAGGGTGCACAGCAAGGCATCCCAGCTTC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACGAAGCTGGGATGCCTTaGTGTGCACCCTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHEAGMP*CAPYGG
Trigger: CCCACCGTAGGGTGCACAGCAAGGCATCCCAGCTTC...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCTGCTCCAACTGCAGCTaGAGATCCAGACTGATGCCC +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGCSNCS*RSRLMP
Trigger: GGGCATCAGTCTGGATCTGCAGCTGCAGTTGGAGCA...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCGGACTTTATTCCCGATaGAGGCCTTGGCCAAATACC +
Preference number: 4 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPGLYSR*RPWPNT
Trigger: GGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCC...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAAAAGCAGGCGGCATCCTaGAGAAAGAAATTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKEKQAAS*RKKFSG
Trigger: TCCAGAGAATTTCTTTCTGCAGGATGCCGCCTGCTT...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGATCTGTGCACAGGTCTTaGGCCCTGCCAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERSVHRS*ALPGHT
Trigger: TGTGTGGCCTGGCAGGGCGCAAGACCTGTGCACAGA...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTTCACTATGCGCCCGGTaGCCGCCGACAGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPSLCAR*PPTGGR
Trigger: TCTACCTCCTGTCGGCGGCCACCGGGCGCATAGTGA...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCACTGTGCGCCTCCGTTTaGAAGACAGTCTTCGACGAG +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPLCASV*KTVFDE
Trigger: CTCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAG...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCACAGGCCAGTGATGTaGTCCGTGGGGTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPHRPVM*SVGSSW
Trigger: CCAGGACGACCCCACGGACCACATCACTGGCCTGTG...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGTCGTCCACCACGTCTaGGGCCTTCCGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGVVHHV*GLPAHL
Trigger: AAGATGTGCCGGAAGGCCCCAGACGTGGTGGACGAC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCAAGACAGTGGGCAGCTTaGGGTACAGCACACACATCC +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPRQWAA*GTAHTS
Trigger: GGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCT...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTGCCCGGGCAAGACAGTaGGCAGCTTGGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPARARQ*AAWGTA
Trigger: TGCTGTACCCCAAGCTGCCCACTGTCTTGCCCGGGC...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTGTGACTCGGGGAGACTaGGAGAAGTGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPVTRGD*EKCWPR
Trigger: CCTGGGCCAGCACTTCTCCCAGTCTCCCCGAGTCAC...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGACTGCAAGTGGGAGGATaGCAGGTCCAGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERLQVGG*QVQGHG
Trigger: ACCATGGCCCTGGACCTGCCATCCTCCCACTTGCAG...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCCACTGGGTTTGGGATaGCCTGGGGCGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCPLGLG*PGAPQP
Trigger: TGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCAATCCAGCTGCTGGTTaGAGTGCGGGCTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTNPAAG*SAGSGK
Trigger: CTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATT...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTGATGAGGGTGGGTCCTaGCAACCTTGCAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPDEGGS*QPCSCA
Trigger: GGCGCAGCTGCAAGGTTGCCAGGACCCACCCTCATC...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGATCACTGCTCATGTTaGGCAGCAGTCTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDDHCSC*AAVSVA
Trigger: TGCTACTGAGACTGCTGCCCAACATGAGCAGTGATC...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCCCCTGCAGCTGGCCTTaGAGATCACTGCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: FAQCPADGTPLWVSSALGPCSWP*RSLLML
Trigger: CAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGG...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCGCTGGTGCCCACGATaGCCACCTCCGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALRWCPR*PPPPGL
Trigger: GAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCAGGTCTGCAAACTCCTaGTCTCACCTGCATCGACCC +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTRSANS*SHLHRP
Trigger: GGGTCGATGCAGGTGAGACCAGGAGTTTGCAGACCT...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCGTGACAGGGAAGGTGTaGAGAAGCGATTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: PLGLGWPGAPQPQGILACVTGKV*RSDSNQ
Trigger: CTGGTTAGAATCGCTTCTCCACACCTTCCCTGTCAC...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTAGCCACCGCACAGTTTaGGGTGACAGGGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGSHRTV*GDREGV
Trigger: CACACCTTCCCTGTCACCCCAAACTGTGCGGTGGCT...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGAAAGAGCAGCCATTTaGTGGCCCCATAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDERAAI*WPHNKS
Trigger: GCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTC...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CAA 72 bp AGGCCCTGCAGCTGGCCTTGGAGATCACTGCTCATGTaGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: RPCSWPWRSLLM*GSSLSSTCRMC
Trigger: GCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCAGGCGGCGACCACCTaGACGGAACTGCCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALQAATT*TELPER
Trigger: GCGCTCTGGCAGTTCCGTTCAGGTGGTCGCCGCCTG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCCTCAAAGCCCGCGGTaGCGCGTCTGCCTAGCGCAC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALPQSPR*RVCLAH
Trigger: GTGCGCTAGGCAGACGCGTCACCGCGGGCTTTGAGG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTTGGGCGGAAGTCAGTaGCTCCTGGCTCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHLGGSQ*LLAHQW
Trigger: CCACTGATGAGCCAGGAGTCACTGACTTCCGCCCAA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGGCTGCAGATCCAGACTaGTGCCCAGGTAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLAADPD*CPGSGS
Trigger: TGAGCCACTACCTGGGCATCAGTCTGGATCTGCAGC...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCATCAAAGGCACCTCTaGGACCTGCGAGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPHQRHL*DLREPP
Trigger: GGGAGGCTCTCGCAGGTCTCAGAGGTGCCTTTGATG...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCGGGCTCGGGGGCGGGTaGAGTGCTGACCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGGLGGG*SADPRS
Trigger: GCTGCGAGGGTCAGCACTGCACCCGCCCCCGAGCCC...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGTTGGCGCGGACCAGGTaGCCAGCCCTGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALLARTR*PALVSS
Trigger: GCTGCTGACCAGGGCTGGGCACCTGGTCCGCGCCAA...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTAGCAGCAGGAGAAGGTaGGCAGCAGGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCSSRRR*AAGSGS
Trigger: AGAGCCTGAGCCTGCTGCGCACCTTCTCCTGCTGCT...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCAGGTCTCCACTGTTaGTGCAGAAAGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQPGLHC*CRKPGP
Trigger: AGGCCCTGGCTTTCTGCAGCAACAGTGGAGACCTGG...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCAGCATTTAGCCACATCTaGTGTAGCACCGCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPAFSHI*CSTAEL
Trigger: CAACTCCGCGGTGCTACAGCAGATGTGGCTAAATGC...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTGTACGAGCAGGCCCTaGAGCTGGCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHCTSRP*SWPWRS
Trigger: TGATCTCCAAGGCCAGCTGCAGGGCCTGCTCGTACA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCAGGCCAGGAGCAGCTaGAGCGCCAGTATCACGAAC +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCQARSS*SASITN
Trigger: GTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCCTG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGTGCTGCGCCCGCAGCTaGTCACAGAAGAAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGCCARS*SQKKLS
Trigger: GCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCA...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CCACTGGGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTGCAAGCAGGCGGCATCCTaGAGAAAGAAATTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLGLGWPGAPQPQGILACKQAAS*RKKFSG
Trigger: TCCAGAGAATTTCTTTCTGCAGGATGCCGCCTGCTT...GCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTTCTGTGCACAGGTCTTaGGCCCTGCCAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCSVHRS*ALPGHT
Trigger: TGTGTGGCCTGGCAGGGCGCAAGACCTGTGCACAGA...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGTTGCCCTCCGACGATaGATGAGAGACAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGVALRR*MRDKAS
Trigger: CGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAAC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCACTTGTCCCATCTCTTTaGCAGCAGTGGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: GTTVSSTGLGKSSHLVAPLVPSL*QQWDPA
Trigger: TGCAGGATCCCACTGCTGCCAAAGAGATGGGACAAG...TGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTCTTGGAGTCCAGGTCTaGGCCCTGGACCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCLGVQV*ALDPGH
Trigger: ATGACCTGGGTCCAGGGCCCAGACCTGGACTCCAAG...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGTGCTCCCGCGGAGGTaGCACCACCATGTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALVLPRR*HHHVGH
Trigger: GTGCCCGACATGGTGGTGCCACCTCCGCGGGAGCAC...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCCAGAAAGAAATTCTCTaGACTTTATTCCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: GTLVPTMATSARPPAPAFQKEIL*TLFPMQ
Trigger: CTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTG...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAATCCATCCACAGTTCCTaGCTTATAACTCCCATATCC +
Preference number: 4 (lower is better)
Translates to: HAVRTPGPSKAGGILQKESIHSS*LITPIS
Trigger: GGATATGGGAGTTATAAGCCAGGAACTGTGGATGGA...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCCCTGCGACGGCTCCGTaGAAGTCAACTCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTPATAP*KSTHSF
Trigger: AAAAGAATGAGTTGACTTTCACGGAGCCGTCGCAGG...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCCACAGCCAGACGCATaGGCCTGCCTGTTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALPQPDA*ACLLGS
Trigger: CGAGCCCAACAGGCAGGCTCATGCGTCTGGCTGTGG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGCAGTCCACAGCACTCTaGTCCTCCAGTTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGQSTAL*SSSSQE
Trigger: TTCCTGGGAACTGGAGGATCAGAGTGCTGTGGACTG...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCCGCACAGTTTGGGGTaGCAGGGAAGGTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPPHSLG*QGRCGE
Trigger: TTCTCCACACCTTCCCTGTCACCCCAAACTGTGCGG...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTTGTAGTGCAGTGGTGTaGTCTCTGCTTGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGCSAVV*SLLAAT
Trigger: GGTTGCAGCAAGCAGAGATCACACCACTGCACTACA...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACAAAAAGGGCAGGACCTaGGACGGCTCCGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHKKGRT*DGSVKV
Trigger: GACTTTCACGGAGCCGTCGCAGGTCCTGCCCTTTTT...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTAACACCATCCGGATCTaGCAGTCAGCCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPNTIRI*QSASHT
Trigger: GGTGTGGGAGGCTGACTGGCAGATCCGGATGGTGTT...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTTGGCGCGGACCAGGTaGCCAGCCCTGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLLARTR*PALVSS
Trigger: GCTGCTGACCAGGGCTGGGCACCTGGTCCGCGCCAA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAAGGTTGGTGAGCCTCTaGAGTTGGGCGGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERRLVSL*SWAEVS
Trigger: ACTGACTTCCGCCCAACTGCAGAGGCTCACCAACCT...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGACCTCGCGGACCTCTaGGGCTTGGCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLDLADL*GLASCS
Trigger: GCTGCAGGAGGCCAAGCCGCAGAGGTCCGCGAGGTC...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCTCCGGGAACGCTGGTaGCCACGATGGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLLRERW*PRWPPP
Trigger: CGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACAGGTCCTGCGCACCCATaGTCTTGGGATGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTGPAHP*SWDGGT
Trigger: GGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACC...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACATGTCCCGCACGGTCCTaGGCACCCATGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTCPARS*APMLLG
Trigger: TCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACA...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCGATCACTGCTCATGTTaGGCAGCAGTCTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWADHCSC*AAVSVA
Trigger: TGCTACTGAGACTGCTGCCCAACATGAGCAGTGATC...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGTGTCAAGCACCGGCCTaGGAAAGAGCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGCQAPA*ERAAIW
Trigger: CCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACA...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCACACCTGTGAACCTTaGCCTTCTGCAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHHTCEP*PSAVGG
Trigger: TCCTCCCACTGCAGAAGGCCAAGGTTCACAGGTGTG...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCCAGGAGCAGCTGCAGCGCCAGTATCACGAACTTCTTCTGTGTCTGGTCCTGCACACCTGTGAACCTTaGCCTTCTGCAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GQEQLQRQYHELLLCLVLHTCEP*PSAVGG
Trigger: TCCTCCCACTGCAGAAGGCCAAGGTTCACAGGTGTG...CAGGACCAGACACAGAAGAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCTGAGCAGGCCTGCATaGGACCTGAGGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALLSRPA*DLRLAA
Trigger: GGCAGCCAGCCTCAGGTCCCATGCAGGCCTGCTCAG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTACTCATTCTTTTCGGTaGGCAGCCCAGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPTHSFR*AAQGLG
Trigger: TCCCAGACCCTGGGCTGCTCACCGAAAAGAATGAGT...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGAACAAGTCTCTTGCCTaGTGTGTGGGTGTGATATTA +
Preference number: 4 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGNKSLA*CVGVIL
Trigger: TAATATCACACCCACACATCAGGCAAGAGACTTGTT...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCGCGGGGTCAGGCTTTaGCACTGTTGGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALRGVRL*HCWLLV
Trigger: GACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCTGTTCCAGGTGGATaGGATGGCGACAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALAVPGG*DGDNRA
Trigger: GGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGC...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTAGGCCGACCAGGAGGTaGCCGAGGGTATCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLRPTRR*PRVSRR
Trigger: CCTCCGTGATACCCTCGGGCACCTCCTGGTCGGCCT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTATGGGGTGGTACCAGTaGTCCCGCGGAGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLMGWYQ*SRGGGT
Trigger: GGTGCCACCTCCGCGGGAGCACTGGTACCACCCCAT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTAAAACGTTTGCTCAGTaGCCAGCGGATGGTACCCCG +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPKTFAQ*PADGTP
Trigger: CGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTT...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTAAAGGGGTCAGAGGATaGTCTGCGTTGCCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCKGVRG*SALPLR
Trigger: TCTGAGCGGCAACGCAGAGCATCCTCTGACCCCTTT...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp CTGGGACCACTAGCCCCAGCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTACAGGAGGGAAATCACTaGTCAGACAACACAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LGPLAPASTAEGLGPGPLQEGNH*SDNTKD
Trigger: GTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTG...TAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGCTGGGGCTAGTGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp CCAGGAATCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCAAGGAACAAGTCTCTTaGCTGATGTGTGGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: PGIQLLVGVRAQGSQGPVKEQVS*LMCGCD
Trigger: ATCACACCCACACATCAGGCAAGAGACTTGTTCCTT...GACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTGGTGTGATCTCTGCTTaGTGCAACCTCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCGVISA*CNLHLL
Trigger: CAGGAGGTGGAGGTTGCAGCAAGCAGAGATCACACC...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAAGGCTTTGCCACTGTTaGCTGCTGGTCAAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: THALGMVAPLCQAPAWERRLCHC*LLVKKG
Trigger: GCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCT...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCAAGCAGCGCAGGACGTaGTGGGGAGGAACCGGCGCC +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGKQRRT*WGGTGA
Trigger: GGCGCCGGTTCCTCCCCACCACGTCCTGCGCTGCTT...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCGGCGCCACCTGCACGTaGAGCACCTTGGCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGGATCT*STLAGS
Trigger: ACTGCCCGCCAAGGTGCTCCACGTGCAGGTGGCGCC...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCGCGTAGGCAGCGACTaGTGCGCAGGCGCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRRVGSD*CAGAGN
Trigger: GTTGCCCGCGCCTGCGCACCAGTCGCTGCCTACGCG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCCTACGGTGGGTGGGTaGGATCGGCACTGTGACTCG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALPTVGG*DRHCDS
Trigger: CGAGTCACAGTGCCGATCCCACCCACCCACCGTAGG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTATGTCCTCCAGTTTCTaGTGGCAGCAAGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPMSSSF*WQQVRR
Trigger: CCTGCGCACTTGCTGCCACCAGAAACTGGAGGACAT...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTAGCCGGAGGATGGGGTaGTACCAGTGCTCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLSRRMG*YQCSRG
Trigger: TCCGCGGGAGCACTGGTACCACCCCATCCTCCGGCT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACATGCTCTTGGGATGGTaGCACCACTGTGTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHMLLGW*HHCVKH
Trigger: GTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
3UTR CAA 72 bp GCAGGAAAGAAGCCCCTGAGGCTAGAGAGAGGTTCCTaGTCCCATCTCTTTGGCAGCAGTGGGATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: AGKKPLRLERGS*SHLFGSSGILH
Trigger: GTGCAGGATCCCACTGCTGCCAAAGAGATGGGACAAGGAACCTCTCTCTAGCCTCAGGGGCTTCTTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCCGGCTCCAGCAGCAGTaGGCTCACTATGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGRLQQQ*AHYAPG
Trigger: ACCGGGCGCATAGTGAGCTCACTGCTGCTGGAGCCG...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGGGTATGCCTGCAGGCTaGAGATGGGGAACAACTTTT +
Preference number: 4 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLGMPAG*RWGTTF
Trigger: AAAAGTTGTTCCCCATCTTCAGCCTGCAGGCATACC...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGGGCTGGTCCAGGTTaGGCAAGTGTACGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLGAGPG*ASVRAG
Trigger: GCCTGCTCGTACACTTGCTCAACCTGGACCAGCCCC...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCATCAAAGGCACCTCTaGGACCTGCGAGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALHQRHL*DLREPP
Trigger: GGGAGGCTCTCGCAGGTCTCAGAGGTGCCTTTGATG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGAGCCAGGCGGGCTaGGGCCACCAGTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRQSQAG*GHQSGQ
Trigger: CTGACCGGACTGGTGGCCTCAGCCCGCCTGGCTCTG...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CCAGGAATCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCTCAACACCTAGTACTTaGGCAGAAAACGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGIQLLVGVRAQGSQGPVSTPST*AENVCS
Trigger: TGAGCAAACGTTTTCTGCTCAAGTACTAGGTGTTGA...GACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCAGCAGCGTCTCCTGTaGCCAGCCGTCTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALQQRLL*PAVFLV
Trigger: CACAAGGAAGACGGCTGGGCACAGGAGACGCTGCTG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAGAGCGCCAGGCTaGTGTTCATCTCCGCAACGA +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALARAPG*CSSPQR
Trigger: TCGTTGCGGAGATGAACAGCAGCCTGGCGCTCTGGC...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGAGGTGGCTGTACAGGTaGAGACAGCAAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALRWLYR*RQQGCG
Trigger: GCCGCAGCCTTGCTGTCTGCACCTGTACAGCCACCT...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCCGCAACTCGCCCCAGTaGTGGCGCACGATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGRNSPQ*WRTISQ
Trigger: CTGGGAGATCGTGCGCCAGCACTGGGGCGAGTTGCG...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGGGGGCACCATTCAGCTaGAGGAGCCGCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRGAPFS*RSRRRR
Trigger: CCGCCTCCTGCGGCTCCTGCAGCTGAATGGTGCCCC...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACATGCTGCGCCCGCAGCTaGTCACAGAAGAAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTCCARS*SQKKLS
Trigger: GCTCAACTTCTTCTGTGAGCAGCTGCGGGCGCAGCA...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCTGGAGCGAACTCCGCTaGTGCGCCCGCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGWSELR*CARSCS
Trigger: TGAGCAGCTGCGGGCGCAGCAGCGGAGTTCGCTCCA...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCTCCGGGAACGCTGGTaGCCACGATGGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRLRERW*PRWPPP
Trigger: CGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACATGGGGACAGGGCTGTTaGCACTGTTTGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTWGQGC*HCLGCS
Trigger: ACTGCAGCCCAAACAGTGCCAACAGCCCTGTCCCCA...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCTTCCGCCGCCACTGTaGGTTCAGGCCGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRLPPPL*VQAARP
Trigger: TGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGAAG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTAAAATCAGAGGGCCTTaGCCACTCTGTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPKIRGP*PLCDPA
Trigger: TGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTT...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GATGAAGAAATGCAGAAACTTGGGCAGATGCCCGTAATGCTCATCCAAGAGCAAGGCCCCCACCCAGAGTaGGAAAGGAGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DEEMQKLGQMPVMLIQEQGPHPE*ERRASR
Trigger: CCTGGAGGCCCTCCTTTCCCACTCTGGGTGGGGGCC...TTGCTCTTGGATGAGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACCTCAAAGCCCGCGGTaGCGCGTCTGCCTAGCGCAC +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRPQSPR*RVCLAH
Trigger: GTGCGCTAGGCAGACGCGTCACCGCGGGCTTTGAGG...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCTGCAGATCCAGACTaGTGCCCAGGTAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALAADPD*CPGSGS
Trigger: TGAGCCACTACCTGGGCATCAGTCTGGATCTGCAGC...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTACCAGGTCTGGTAGATaGAGAAATGCAGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGTRSGR*RNAETW
Trigger: CCAAGTTTCTGCATTTCTTCATCTACCAGACCTGGT...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGCCGTCTTCCTTGTaGAGGTGCAGGCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRQPSSL*RCRRPA
Trigger: CGCGGGCCGCCTGCACCTGCACAAGGAAGACGGCTG...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGGCCCTGCCCACCCCCTaGTCGCTCAGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEALPTP*SLSHSR
Trigger: CCTGCTGTGGCTGAGCGAGCAGGGGGTGGGCAGGGC...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGCAGTGAGCTCACTATaGGCCCGGTGGCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQAVSSL*ARWPPT
Trigger: TGTCGGCGGCCACCGGGCGCATAGTGAGCTCACTGC...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTCCAGATGCGAACGGTaGAGTCCAGGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLSRCER*SPGWSR
Trigger: CCTGCTCCAGCCTGGACTGCACCGTTCGCATCTGGA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCAGTGCTTGTGGGGCTaGACGGTGGCAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALQCLWG*TVAGKK
Trigger: CTTCTTTCCTGCCACCGTGCAGCCCCACAAGCACTG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCTCTGGTGGCAGCAAGTaGGCAGGCCGGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGSGGSK*AGRPWS
Trigger: ACTCCAAGGCCGGCCTGCGCACTTGCTGCCACCAGA...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACAAAAACGTTTGCTCAGTaGCCAGCGGATGGTACCCCG +
Preference number: 4 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTKTFAQ*PADGTP
Trigger: CGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTT...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGAACGAAAGCAAGGTCTaGAAACTCCTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQNESKV*KLLVSP
Trigger: AGGTGAGACCAGGAGTTTGCAGACCTTGCTTTCGTT...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCGACTTCGTGGAGGCTaGTGCGCAGAAGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLRLRGG*CAEAAT
Trigger: TGTGGCTGCTTCTGCGCACCAGCCTCCACGAAGTCG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGCTCCAGGCGGCGCAGTaGTTCCAGCCCATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQLQAAQ*FQPMRQ
Trigger: CTGACGCATGGGCTGGAACCACTGCGCCGCCTGGAG...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGGGTGCAGCACGCTCATaGGGCAGCGCGCCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEGAARS*GSAPRW
Trigger: CCAACGCGGCGCGCTGCCCCATGAGCGTGCTGCACC...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGTGAGCCTCTGCAGTTaGGCGGAAGTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALVSLCS*AEVSDS
Trigger: GGAGTCACTGACTTCCGCCCAACTGCAGAGGCTCAC...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GATGAAGAAATGCAGAAACTTGGGCAGATGCCCGTAATGCTCATCCAAGAGCAAGGCTCCCAGGTCCTGTaGGGACAGGGCTGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: DEEMQKLGQMPVMLIQEQGSQVL*GQGCWH
Trigger: GTGCCAACAGCCCTGTCCCCACAGGACCTGGGAGCC...TTGCTCTTGGATGAGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCTCTGCCACTGGGTTTaGGATGGCCTGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRLCHWV*DGLGRH
Trigger: GTGGCGCCCCAGGCCATCCCAAACCCAGTGGCAGAG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCAGAAATGCAGAAACTTaGGCAGATGCCCGTAATGCT +
Preference number: 4 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTRNAET*ADARNA
Trigger: AGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCT...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTCCAGGTCTGGGCCCTaGACCCAGGTCATCATCTCC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLSRSGP*TQVIIS
Trigger: GGAGATGATGACCTGGGTCCAGGGCCCAGACCTGGA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGTCACGGAGGCGCGTGTaGGTGCCCCAGAGACCACTG +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQSRRRV*VPQRPL
Trigger: CAGTGGTCTCTGGGGCACCCACACGCGCCTCCGTGA...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCCTGCAGCCGGAGGATaGGGTGGTACCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRPAAGG*GGTSAP
Trigger: GGGAGCACTGGTACCACCCCATCCTCCGGCTGCAGG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTGTGACAGGGAAGGTGTaGAGAAGCGATTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPVTGKV*RSDSNQ
Trigger: CTGGTTAGAATCGCTTCTCCACACCTTCCCTGTCAC...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTGAAAGAGCAGCCATTTaGTGGCCCCATAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCERAAI*WPHNKS
Trigger: GCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTC...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGACTCTGAGACGGAGCTaGGGGGTCCCCCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSETLRRS*GVPQLR
Trigger: GCGCAGCTGGGGGACCCCTCAGCTCCGTCTCAGAGT...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCCCCACACCTTCACGGTaGTGTCCCGGGAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGPTPSR*CPGKLS
Trigger: TGACAGCTTCCCGGGACAGCACCGTGAAGGTGTGGG...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCGTCCTCCCTCGGAGCTaGTCCAACTGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGVLPRS*SNCSCR
Trigger: TCTGCAGCTGCAGTTGGAGCAGCTCCGAGGGAGGAC...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GATGAAGAAATGCAGAAACTTGGGCAGATGCCCGTAATGCTCATCCAAGAGCAATCCGGGGCTAAAGAGTaGGGCTCCGCAGGTGAGACC +
Preference number: 4 (lower is better)
Translates to: DEEMQKLGQMPVMLIQEQSGAKE*GSAGET
Trigger: GGTCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGA...TTGCTCTTGGATGAGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGCCCAAGTCCAGCAGCTaGGAGTGCGACCAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQPKSSS*ECDQSV
Trigger: GACCGACTGGTCGCACTCGCAGCTGCTGGACTTGGG...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTAACGAAAGCAAGGTCTaGAAACTCCTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPNESKV*KLLVSP
Trigger: AGGTGAGACCAGGAGTTTGCAGACCTTGCTTTCGTT...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGAAGCAGCGCAGGACGTaGTGGGGAGGAACCGGCGCC +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEKQRRT*WGGTGA
Trigger: GGCGCCGGTTCCTCCCCACCACGTCCTGCGCTGCTT...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGTCGAGATCCGTGAGGTaGCTGTACAGGTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALSRSVR*LYRCRQ
Trigger: CTGTCTGCACCTGTACAGCCACCTCACGGATCTCGA...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCGTGTGCCCCACCACTaGCAGGTACCGGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLRVPHH*QVPVLV
Trigger: AACAAGAACCGGTACCTGCCAGTGGTGGGGCACACG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAGGCTCCCAGGTCCTGTaGGGACAGGGCTGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRGSQVL*GQGCWH
Trigger: GTGCCAACAGCCCTGTCCCCACAGGACCTGGGAGCC...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCGATGGTACCCCGCTATaGGTCTCCTCTGCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGDGTPL*VSSALG
Trigger: GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATC...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGTGTCAAGCACCGGCCTaGGAAAGAGCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALCQAPA*ERAAIW
Trigger: CCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTGACA...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCCCATGCTCTTGGGATaGTGGCACCACTGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALPMLLG*WHHCVK
Trigger: CTTGACACAGTGGTGCCACCATCCCAAGAGCATGGG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGTCTCTCTCTCCACTCTaGGGGTCCCGGCACTCCACT +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRSLSPL*GSRHST
Trigger: AGTGGAGTGCCGGGACCCTCAGAGTGGAGAGAGAGA...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGATGCCCCAGAGACCACTaGCGTCTGCGATGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRCPRDH*RLRWGL
Trigger: GAGACCCCATCGCAGACGTCAGTGGTCTCTGGGGCA...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCTGGAGCAGCTTCCTCTaGCACTGGGTTTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGWSSFL*HWVWDG
Trigger: GCCATCCCAAACCCAGTGGCAGAGGAAGCTGCTCCA...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTAGTCTCAGTAGCACCTaGAGGATGTGCACACGGTCG +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLSLSST*RMCTRS
Trigger: CGACCGTGTGCACATCCTGCAGGTGCTACTGAGACT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTTTTCCACGACTTCGTaGAGGCTGGTGCGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLFSTTS*RLVRRS
Trigger: GCTTCTGCGCACCAGCCTCCACGAAGTCGTGGAAAA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTCCAGGTCCGAGATGGTaGTTTTGTGCAAATCCCGGC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLPGPRW*FCANPG
Trigger: GCCGGGATTTGCACAAAACCACCATCTCGGACCTGG...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGATCACTATGCGCCCGGTaGCCGCCGACAGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRSLCAR*PPTGGR
Trigger: TCTACCTCCTGTCGGCGGCCACCGGGCGCATAGTGA...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACTGTGCACCCTACGGTaGGTGGGTGGGATCGGCACT +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRLCTLR*VGGIGT
Trigger: AGTGCCGATCCCACCCACCCACCGTAGGGTGCACAG...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAGAGCGGGCCAGAAGCTaGGATGCCTTGCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRERARS*DALLCT
Trigger: GGTGCACAGCAAGGCATCCCAGCTTCTGGCCCGCTC...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGAGCCGGGGAAGCAGATaGGCCTCAGGCAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQSRGSR*ASGSAC
Trigger: ACAAGCACTGCCTGAGGCCCATCTGCTTCCCCGGCT...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCCTTGGCCTTCTGCAGTaGGAGGATGCGGTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGLGLLQ*EDAVVP
Trigger: AGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGAGGCTGTAGTGCAGTaGTGTGATCTCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALEAVVQ*CDLCLL
Trigger: CAGCAAGCAGAGATCACACCACTGCACTACAGCCTC...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGAGCAGCACAGGCCAGTaGTGTGGTCCGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSESSTGQ*CGPWGR
Trigger: ACGACCCCACGGACCACATCACTGGCCTGTGCTGCT...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGAGCAGGCATACAGTTTaGGCGTGGGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRSRHTV*AWGSST
Trigger: TGTGCTGCTGCCCCACGCTCAAACTGTATGCCTGCT...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGTTGGGCGGAAGTCAGTaGCTCCTGGCTCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQLGGSQ*LLAHQW
Trigger: CCACTGATGAGCCAGGAGTCACTGACTTCCGCCCAA...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGCGTGCAGCAGCTTCTTaGGCTCTGGCCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSERAAAS*ALAGSA
Trigger: TGCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACG...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTTCAACACCTAGTACTTaGGCAGAAAACGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCSTPST*AENVCS
Trigger: TGAGCAAACGTTTTCTGCTCAAGTACTAGGTGTTGA...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGCCGCACAGTTTGGGGTaGCAGGGAAGGTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQPHSLG*QGRCGE
Trigger: TTCTCCACACCTTCCCTGTCACCCCAAACTGTGCGG...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGGAAGCTGTCACCATTaGCTCTACTTCCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALGSCHH*LYFLAV
Trigger: TACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCC...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAGGCCAGAAGCTGGGATaGCTTGCTGTGCACCCTACG +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRGQKLG*LAVHPT
Trigger: CGTAGGGTGCACAGCAAGGCATCCCAGCTTCTGGCC...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGTGGAGCAGCTTCCTCTaGCACTGGGTTTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQWSSFL*HWVWDG
Trigger: GCCATCCCAAACCCAGTGGCAGAGGAAGCTGCTCCA...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCGTGTGCCCCACCACTaGCAGGTACCGGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRRVPHH*QVPVLV
Trigger: AACAAGAACCGGTACCTGCCAGTGGTGGGGCACACG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCCTGTGCGCCTCCGTTTaGAAGACAGTCTTCGACGAG +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGLCASV*KTVFDE
Trigger: CTCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAG...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCCAATGCTGTTCCAGGTaGATGCGATGGCGACAACCG +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGQCCSR*MRWRQP
Trigger: CGGTTGTCGCCATCGCATCCACCTGGAACAGCATTG...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGGGTCCCGGGCCACTATaGCGTCCAAGTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEGPGPL*RPSPPS
Trigger: CGAAGGAGGACTTGGACGCCATAGTGGCCCGGGACC...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGTTGTCAAAGCCTTCCTaGCGCTGCTGCCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQLSKPS*RCCQEG
Trigger: ACCCTCCTGGCAGCAGCGCCAGGAAGGCTTTGACAA...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGATCCAGGTCTGGGCCCTaGACCCAGGTCATCATCTCC +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRSRSGP*TQVIIS
Trigger: GGAGATGATGACCTGGGTCCAGGGCCCAGACCTGGA...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GATGAAGAAATGCAGAAACTTGGGCAGATGCCCGTAATGCTCATCCAAGAGCAAACTCATTCTTTTCGGTaGGCAGCCCAGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: DEEMQKLGQMPVMLIQEQTHSFR*AAQGLG
Trigger: TCCCAGACCCTGGGCTGCTCACCGAAAAGAATGAGT...TTGCTCTTGGATGAGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR TCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTAGGTCATCATCTCCTTaGATAGGAAGCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLRSSSP*IGSPLG
Trigger: ACCCAGAGGGCTTCCTATTCAAGGAGATGATGACCT...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTTTGCCACTGTTGGCTaGTGGTCAAAAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLFATVG*WSKRAG
Trigger: TCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGTGCTCCAACTGCAGCTaGAGATCCAGACTGATGCCC +
Preference number: 4 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQCSNCS*RSRLMP
Trigger: GGGCATCAGTCTGGATCTGCAGCTGCAGTTGGAGCA...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGAAAGGGGTCAGAGGATaGTCTGCGTTGCCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRKGVRG*SALPLR
Trigger: TCTGAGCGGCAACGCAGAGCATCCTCTGACCCCTTT...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGGATGGTACCCCGCTATaGGTCTCCTCTGCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEDGTPL*VSSALG
Trigger: GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATC...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGTATGATATCTGTCATTaGTTTCCATCCACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QPFGGPITRATAQFGVTGYDICH*FPSTVP
Trigger: AGGAACTGTGGATGGAAACCAATGACAGATATCATA...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCGAGGCTGTAGTGCAGTaGTGTGATCTCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGEAVVQ*CDLCLL
Trigger: CAGCAAGCAGAGATCACACCACTGCACTACAGCCTC...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGACCAGGTCTGGTAGATaGAGAAATGCAGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: GGILQKEILWTLFPMQALTRSGR*RNAETW
Trigger: CCAAGTTTCTGCATTTCTTCATCTACCAGACCTGGT...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCAGGTCATCATCTCCTTaGATAGGAAGCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGRSSSP*IGSPLG
Trigger: ACCCAGAGGGCTTCCTATTCAAGGAGATGATGACCT...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAAGTCTCAGTAGCACCTaGAGGATGTGCACACGGTCG +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRSLSST*RMCTRS
Trigger: CGACCGTGTGCACATCCTGCAGGTGCTACTGAGACT...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGGGCAGGACTTTCCCCTaGCTTTGCTGTCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRGRTFP*LCCLGD
Trigger: ATCTCCAAGACAGCAAAGGCAGGGGAAAGTCCTGCC...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACCAGGTCCGAGATGGTaGTTTTGTGCAAATCCCGGC +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRPGPRW*FCANPG
Trigger: GCCGGGATTTGCACAAAACCACCATCTCGGACCTGG...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGAATCCAGCTGCTGGTTaGAGTGCGGGCTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSENPAAG*SAGSGK
Trigger: CTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATT...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAAGGTCTGCAAACTCCTaGTCTCACCTGCATCGACCC +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRRSANS*SHLHRP
Trigger: GGGTCGATGCAGGTGAGACCAGGAGTTTGCAGACCT...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTCCATCCACAGTTCCTaGCTTATAACTCCCATATCC +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLSIHSS*LITPIS
Trigger: GGATATGGGAGTTATAAGCCAGGAACTGTGGATGGA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAGGTATGCCTGCAGGCTaGAGATGGGGAACAACTTTT +
Preference number: 4 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRGMPAG*RWGTTF
Trigger: AAAAGTTGTTCCCCATCTTCAGCCTGCAGGCATACC...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCAGGAGGGAAATCACTaGTCAGACAACACAAAAGAC +
Preference number: 4 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRQEGNH*SDNTKD
Trigger: GTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR TCA 90 bp GATGAAGAAATGCAGAAACTTGGGCAGATGCCCGTAATGCTCATCCAAGAGCAAAACAAGTCTCTTGCCTaGTGTGTGGGTGTGATATTA +
Preference number: 4 (lower is better)
Translates to: DEEMQKLGQMPVMLIQEQNKSLA*CVGVIL
Trigger: TAATATCACACCCACACATCAGGCAAGAGACTTGTT...TTGCTCTTGGATGAGCATTACGGGCATCTGCCCAAGTTTCTGCATTTCTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CCA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTTATGATATCTGTCATTaGTTTCCATCCACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLYDICH*FPSTVP
Trigger: AGGAACTGTGGATGGAAACCAATGACAGATATCATA...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR GCA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGAAGGAACAAGTCTCTTaGCTGATGTGTGGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEKEQVS*LMCGCD
Trigger: ATCACACCCACACATCAGGCAAGAGACTTGTTCCTT...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp CGGCCCGCGCCGTCCAGCACCACGAAGCGTCCACCCACCGGGTCCTaGGCCACCGAGCGCAGCCCGGCTGCCACCTCCAGGCGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: RPAPSSTTKRPPTGS*ATERSPAATSRRRS
Trigger: ACTGCGCCGCCTGGAGGTGGCAGCCGGGCTGCGCTCGGTGGCGCAGGACCCGGTGGGTGGACGCTTCGTGGTGCTGGACGGCGCGGGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp GAGCCGTCGGCGCACGCGCACACGAGGCGCGTAGGCAGCGACTGGTaGGCAGGCGCGGGCAACGCGGGCGCCACCTGCACGTGGAGCACC +
Preference number: 5 (lower is better)
Translates to: EPSAHAHTRRVGSDW*AGAGNAGATCTWST
Trigger: GGTGCTCCACGTGCAGGTGGCGCCCGCGTTGCCCGCGCCTGCGCACCAGTCGCTGCCTACGCGCCTCGTGTGCGCGTGCGCCGACGGCTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GCCGGCCACCCCTCCGGGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCGGTTGGGCCTCAGAATaGCCAGCCCCGCGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: AGHPSGNAGAHDGHLRQAGWASE*PAPRGP
Trigger: GGGGCCCCGCGGGGCTGGCAATTCTGAGGCCCAACC...GGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCCCGGAGGGGTGGCCGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp TGCAGCACGCTCATGGGGCAGCGCGCCGCGTTGGCGCGGACCAGGTaGCCAGCCCTGGTCAGCAGCCACAGCGCCTCGCGCGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CSTLMGQRAALARTR*PALVSSHSASRGRQ
Trigger: CTGCCTGCCGCGCGAGGCGCTGTGGCTGCTGACCAGGGCTGGGCACCTGGTCCGCGCCAACGCGGCGCGCTGCCCCATGAGCGTGCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 90 bp GAAGCGTCCACCCACCGGGTCCTGCGCCACCGAGCGCAGCCCGGCTaGCACCTCCAGGCGGCGCAGTGGTTCCAGCCCATGCGTCAGGCG +
Preference number: 5 (lower is better)
Translates to: EASTHRVLRHRAQPG*HLQAAQWFQPMRQA
Trigger: CGCCTGACGCATGGGCTGGAACCACTGCGCCGCCTGGAGGTGGCAGCCGGGCTGCGCTCGGTGGCGCAGGACCCGGTGGGTGGACGCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp GCGCCAACGGCGAGTAGAGCTCGCGTACGCGCCACAGCTGCATGCTaGTCGCGCACAGGGACAGCACCGGCCAGCCCGGGCGCACCGGCG +
Preference number: 5 (lower is better)
Translates to: APTASRARVRATAAC*SRTGTAPASPGAPA
Trigger: CGCCGGTGCGCCCGGGCTGGCCGGTGCTGTCCCTGTGCGCGAGCAGCATGCAGCTGTGGCGCGTACGCGAGCTCTACTCGCCGTTGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGGGCCTCAGGCAGTGCTaGTGGGGCTGCACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGGLRQC*WGCTVA
Trigger: TGCCACCGTGCAGCCCCACAAGCACTGCCTGAGGCC...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp CGGCTGCCGCGCAGTCCTCCGGCTCCAGCAGCAGTGAGCTCACTATaGGCCCGGTGGCCGCCGACAGGAGGTAGACCGAGCCGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: RLPRSPPAPAAVSSL*ARWPPTGGRPSRRR
Trigger: GCGCCGACGGCTCGGTCTACCTCCTGTCGGCGGCCACCGGGCGCATAGTGAGCTCACTGCTGCTGGAGCCGGAGGACTGCGCGGCAGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp CGCAGCCCGGCTGCCACCTCCAGGCGGCGCAGTGGTTCCAGCCCATaGGTCAGGCGCGCCGCGCGCAGCTCGGCTCTCTTCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RSPAATSRRRSGSSP*VRRAARSSALFSFS
Trigger: GGAAAAGGAGAAGAGAGCCGAGCTGCGCGCGGCGCGCCTGACGCATGGGCTGGAACCACTGCGCCGCCTGGAGGTGGCAGCCGGGCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp CCAGCGCTACCTCGCCCACCTGCGCCGCCGCCTGCAGGTCCCAGGTaGGTAGCGTCCCGTCCTGCGAGGCCGACAACACCAGGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: PALPRPPAPPPAGPR*VASRPARPTTPGSC
Trigger: ACACGACCCTGGTGTTGTCGGCCTCGCAGGACGGGACGCTACGCACCTGGGACCTGCAGGCGGCGGCGCAGGTGGGCGAGGTAGCGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp GACAGCTTGTCCTGGCCCCAGAAGCCCAGCGCTACCTCGCCCACCTaGGCCGCCGCCTGCAGGTCCCAGGTGCGTAGCGTCCCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DSLSWPQKPSATSPT*AAACRSQVRSVPSC
Trigger: GCAGGACGGGACGCTACGCACCTGGGACCTGCAGGCGGCGGCGCAGGTGGGCGAGGTAGCGCTGGGCTTCTGGGGCCAGGACAAGCTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp GTTGCGCCAACGGCGAGTAGAGCTCGCGTACGCGCCACAGCTGCATaGTGCTCGCGCACAGGGACAGCACCGGCCAGCCCGGGCGCACCG +
Preference number: 5 (lower is better)
Translates to: VAPTASRARVRATAA*CSRTGTAPASPGAP
Trigger: CGGTGCGCCCGGGCTGGCCGGTGCTGTCCCTGTGCGCGAGCAGCATGCAGCTGTGGCGCGTACGCGAGCTCTACTCGCCGTTGGCGCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGGTGGGGACAGGGCTGTaGGCACTGTTTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGVGTGL*ALFGLQ
Trigger: CTGCAGCCCAAACAGTGCCAACAGCCCTGTCCCCAC...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp CGGACAGGCGCCAGCAGCGTCTCCTGTGCCCAGCCGTCTTCCTTGTaGAGGTGCAGGCGGCCCGCGCCGTCCAGCACCACGAAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: RTGASSVSCAQPSSL*RCRRPAPSSTTKRP
Trigger: TGGACGCTTCGTGGTGCTGGACGGCGCGGGCCGCCTGCACCTGCACAAGGAAGACGGCTGGGCACAGGAGACGCTGCTGGCGCCTGTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp GCCACAGCCAGACGCATGAGCCTGCCTGTTGGGCTCGGGGGCGGGTaGAGTGCTGACCCTCGCAGCACCAGGCGGCGACCACCTGAACGG +
Preference number: 5 (lower is better)
Translates to: ATARRMSLPVGLGGG*SADPRSTRRRPPER
Trigger: CCGTTCAGGTGGTCGCCGCCTGGTGCTGCGAGGGTCAGCACTGCACCCGCCCCCGAGCCCAACAGGCAGGCTCATGCGTCTGGCTGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GCATCCGCTGGGCCTGGAGCTCCGGGGCTAAAGAGTGCGGCTCCGCAGGTGAGATGGGTCCTGGCAACCTaGCAGCTGCGCCGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: ASAGPGAPGLKSAAPQVRWVLAT*QLRRRG
Trigger: GCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCCA...TCTCACCTGCGGAGCCGCACTCTTTAGCCCCGGAGCTCCAGGCCCAGCGGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS TCA 90 bp GCAGTAGGCCACGGCTGCCGCGCAGTCCTCCGGCTCCAGCAGCAGTaGGCTCACTATGCGCCCGGTGGCCGCCGACAGGAGGTAGACCGA +
Preference number: 5 (lower is better)
Translates to: AVGHGCRAVLRLQQQ*AHYAPGGRRQEVDR
Trigger: TCGGTCTACCTCCTGTCGGCGGCCACCGGGCGCATAGTGAGCTCACTGCTGCTGGAGCCGGAGGACTGCGCGGCAGCCGTGGCCTACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp GCACCGACAGCGTGCCGTCCGTGTGCCCCACCACTGGCAGGTACCTaGGAGTGGGAAGAGCCTGTTGGCGCGGACCCTGCCGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: APTACRPCAPPLAGT*EWEEPVGADPAAPS
Trigger: GGAAGGAGCGGCAGGGTCCGCGCCAACAGGCTCTTCCCACTCGCAGGTACCTGCCAGTGGTGGGGCACACGGACGGCACGCTGTCGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528691.5
CDS-3UTR CAA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGCTTCTCCCCCATCCATaGGAGCAGCTTCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGLLPHP*EQLPLP
Trigger: TGGCAGAGGAAGCTGCTCCAATGGATGGGGGAGAAG...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGCAGGCTTTGCCACTGTaGGCTGCTGGTCAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGQALPL*AAGQKG
Trigger: CCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTG...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGGTGGCACCACGCCCAGCCGTCTTCCTaGTGCAGGTGCAGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LGCPARSCAPMLLGWWHHAQPSS*CRCRRP
Trigger: GGGCCGCCTGCACCTGCACAAGGAAGACGGCTGGGC...GTGGTGCCACCATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAGTGGGGACAGGGCTGTaGGCACTGTTTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PTRRAHPGALQSRRHPAEVGTGL*ALFGLQ
Trigger: CTGCAGCCCAAACAGTGCCAACAGCCCTGTCCCCAC...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAGGGGGCTGGTCCAGGTaGAGCAAGTGTACGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PTRRAHPGALQSRRHPAEGGWSR*SKCTSR
Trigger: CCTGCTCGTACACTTGCTCAACCTGGACCAGCCCCC...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCAGCTGGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTGTCCCCCAGCTGCGCTaGGGTGCCAGCATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SAGPSNLAVPHGPAHPCSVPQLR*GASIRW
Trigger: CCAGCGGATGCTGGCACCCAAGCGCAGCTGGGGGAC...AGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp ACCTGCGCCGCCGCCTGCAGGTCCCAGGTGCGTAGCGTCCCGTCCTaGGAGGCCGACAACACCAGGGTCGTGTTCGGGAGCACAGTCATA +
Preference number: 5 (lower is better)
Translates to: TCAAACRSQVRSVPS*EADNTRVVFGSTVI
Trigger: TATGACTGTGCTCCCGAACACGACCCTGGTGTTGTCGGCCTCGCAGGACGGGACGCTACGCACCTGGGACCTGCAGGCGGCGGCGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp TGCCTAGCGCACAGAGCGCCACGGCCGGGTAGCAGCAGGAGAAGGTaGGCAGCAGGCTCAGGCTCTCTTCGGCATAGGGGAAGACGCGCC +
Preference number: 5 (lower is better)
Translates to: CLAHRAPRPGSSRRR*AAGSGSLRHRGRRA
Trigger: GGCGCGTCTTCCCCTATGCCGAAGAGAGCCTGAGCCTGCTGCGCACCTTCTCCTGCTGCTACCCGGCCGTGGCGCTCTGTGCGCTAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 90 bp TTCAGGGTCAGGAACCGGAGCTGGGCGGTGGCTGGGCTTCACCCATaGTGCCCCCTCACCAGTGATGTGGTCCGTGGGGTCGTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: FRVRNRSWAVAGLHP*CPLTSDVVRGVVLG
Trigger: CCCCAGGACGACCCCACGGACCACATCACTGGTGAGGGGGCAGCATGGGTGAAGCCCAGCCACCGCCCAGCTCCGGTTCCTGACCCTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 90 bp CCCGCACCCACCGGTTCTTGTTCTTCCAGGCGCAGGCCACAGAGCTaGAGCGCAACTCGCCCCAGTGCTGGCGCACGATCTCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PAPTGSCSSRRRPQS*SATRPSAGARSPRR
Trigger: CCTCCTGGGAGATCGTGCGCCAGCACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCGCCTGGAAGAACAAGAACCGGTGGGTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528691.5
CDS-3UTR CAA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAATGCACGTGGAGCACCTaGGCGGGCAGTTGCGCCAAC +
Preference number: 5 (lower is better)
Translates to: HAVRTPGPSKAGGILQKECTWST*AGSCAN
Trigger: GTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGCA...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CCCACACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAGGCTGTTGGCACTGTTaGGGCTGCAGTGCTGACCTC +
Preference number: 5 (lower is better)
Translates to: PTRRAHPGALQSRRHPAEGCWHC*GCSADL
Trigger: GAGGTCAGCACTGCAGCCCAAACAGTGCCAACAGCC...TTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCTGGGTCCTGGCAACCTaGCAGCTGCGCCGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTWVLAT*QLRRRG
Trigger: GCCCCGGCGGCGCAGCTGCAAGGTTGCCAGGACCCA...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCCGCCGCCACTGTGGGTTCAGGCCGCACGCCCACACGCCGTGCGCACCCCGGGAGATCACTGCTCATGTaGGGCAGCAGTCTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: SAATVGSGRTPTRRAHPGRSLLM*GSSLSS
Trigger: GCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT...CCCGGGGTGCGCACGGCGTGTGGGCGTGCGGCCTGAACCCACAGTGGCGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GCTGCGGCTCCACACGCGGCAACGGCAGCTTCAGCGTCCGGATGGGGCCGTCCATGCTCACAGAAGAAGTaGAGCGCGTCGATGGGGCCC +
Preference number: 5 (lower is better)
Translates to: AAAPHAATAASASGWGRPCSQKK*SASMGP
Trigger: GGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGCA...TGGACGGCCCCATCCGGACGCTGAAGCTGCCGTTGCCGCGTGTGGAGCCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCGCGGACCTCTGCGGCTaGGCCTCCTGCAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: FAQCPADGTPLWVSSALGADLCG*ASCSRR
Trigger: CCTCCGGCTGCAGGAGGCCAAGCCGCAGAGGTCCGC...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCACTGTCCCAGCAGGCTaGAACCCAAACTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: GTLVPTMATSARPPAPAFTVPAG*NPNWGP
Trigger: AGGCCCCCAGTTTGGGTTCAAGCCTGCTGGGACAGT...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 90 bp GCTGGCGCACGATCTCCCAGGAGGAGAAGGCGCCTTCGAGATCCGTaGGGTGGCTGTACAGGTGCAGACAGCAAGGCTGCGGCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: AGARSPRRRRRLRDP*GGCTGADSKAAAQG
Trigger: CCCCTGCGCCGCAGCCTTGCTGTCTGCACCTGTACAGCCACCTCACGGATCTCGAAGGCGCCTTCTCCTCCTGGGAGATCGTGCGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 90 bp GGCAGAGGCGGGATCCCAGCGCCAGCACCAGGTCTCCACTGTTGCTaGAGAAAGCCAGGGCCTGAGGGGCACCATTCAGCTGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GRGGIPAPAPGLHCC*RKPGPEGHHSAAGA
Trigger: GGCTCCTGCAGCTGAATGGTGCCCCTCAGGCCCTGGCTTTCTGCAGCAACAGTGGAGACCTGGTGCTGGCGCTGGGATCCCGCCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000534167.5
CDS CCA 90 bp TTCCAGGCGCAGGCCACAGAGCTGCAGCGCAACTCGCCCCAGTGCTaGCGCACGATCTCCCAGGAGGAGAAGGCGCCTTCGAGATCCGTG +
Preference number: 5 (lower is better)
Translates to: FQAQATELQRNSPQC*RTISQEEKAPSRSV
Trigger: CACGGATCTCGAAGGCGCCTTCTCCTCCTGGGAGATCGTGCGCCAGCACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCGCCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS-3UTR CAA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGGCGCGGGGTCAGGCTTaGCCACTGTTGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGARGQA*PLLAAG
Trigger: ACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCGC...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCTCGTCGCGCGGGGTCAGGCTTaGCCACTGTTGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LLVGVRAQGSQGPVQLLVARGQA*PLLAAG
Trigger: ACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCGC...GACGAGGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTGGTTGGGCCTCAGAATaGCCAGCCCCGCGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGGWASE*PAPRGP
Trigger: GGGGCCCCGCGGGGCTGGCAATTCTGAGGCCCAACC...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCACGCGCCGGGACAGCTaGTCCTGGCCCCAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTTRRDS*SWPQKP
Trigger: GGGCTTCTGGGGCCAGGACAAGCTGTCCCGGCGCGT...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGCCGAGCCCTTCCGGACCAAGCCCCTCCCCTAGGGACTTTCAGGCTAAAGGGGTGCACGTGGAGCACCTaGGCGGGCAGTTGCGCCAAC +
Preference number: 5 (lower is better)
Translates to: GRALPDQAPPLGTFRLKGCTWST*AGSCAN
Trigger: GTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGCA...CCCCTTTAGCCTGAAAGTCCCTAGGGGAGGGGCTTGGTCCGGAAGGGCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATCCGTGCAGCAGCTTCTaGAGCTCTGGCCGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDPCSSF*SSGRQC
Trigger: GCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGG...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGTGCGCAGGCCGGCCTaGGAGTCCAGGTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTVRRPA*ESRSGP
Trigger: GGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCAC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 90 bp CCCTCGATCGTGCCCGCCTCCGGGTATGCCTGCAGGGTAGCATGCTaGGGCCCTGCTCCCATGTCACACCCAAGCCAGCCCCTACCTTCT +
Preference number: 5 (lower is better)
Translates to: PSIVPASGYACRVAC*GPAPMSHPSQPLPS
Trigger: AGAAGGTAGGGGCTGGCTTGGGTGTGACATGGGAGCAGGGCCTCAGCATGCTACCCTGCAGGCATACCCGGAGGCGGGCACGATCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525150.5
ENST00000528691.5
ENST00000529209.1
CDS GCA 90 bp AGTGCTGACCCTCGCAGCACCAGGCGGCGACCACCTGAACGGAACTaGCAGAGCGCCAGGCTGCTGTTCATCTCCGCAACGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SADPRSTRRRPPERN*QSARLLFISATSSS
Trigger: GCTGCTGCTCGTTGCGGAGATGAACAGCAGCCTGGCGCTCTGGCAGTTCCGTTCAGGTGGTCGCCGCCTGGTGCTGCGAGGGTCAGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp TTCTTCCAGGCGCAGGCCACAGAGCTGCAGCGCAACTCGCCCCAGTaGTGGCGCACGATCTCCCAGGAGGAGAAGGCGCCTTCGAGATCC +
Preference number: 5 (lower is better)
Translates to: FFQAQATELQRNSPQ*WRTISQEEKAPSRS
Trigger: GGATCTCGAAGGCGCCTTCTCCTCCTGGGAGATCGTGCGCCAGCACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCGCCTGGAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 90 bp CTGGCAGGTACCGGTTCTTGTTCTTCCAGGCGCAGGCCACAGAGCTaGAGCGCAACTCGCCCCAGTGCTGGCGCACGATCTCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LAGTGSCSSRRRPQS*SATRPSAGARSPRR
Trigger: CCTCCTGGGAGATCGTGCGCCAGCACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCGCCTGGAAGAACAAGAACCGGTACCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 90 bp GGTTTGGGATGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTaGCCCTGGCTGCAGAGGGGCAAGAGATGGTGCCTGATGGGTTGC +
Preference number: 5 (lower is better)
Translates to: GLGWPGAPQPQGILA*PWLQRGKRWCLMGC
Trigger: GCAACCCATCAGGCACCATCTCTTGCCCCTCTGCAGCCAGGGGCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCATCCCAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000529209.1
CDS GCA 90 bp GGCGGCCTGGCCTTTGGCAGGGGAGCTACTGACCCGAAGACACAATaGTGTTCCAGGTGGATGCGATGGCGACAACCGGGCCCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GGLAFGRGATDPKTQ*CSRWMRWRQPGPGC
Trigger: ACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTCAGTAGCTCCCCTGCCAAAGGCCAGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS-3UTR CAA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGTGCGCAGGCCGGCCTaGGAGTCCAGGTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: THALGMVAPLCQAPAWERVRRPA*ESRSGP
Trigger: GGGCCCAGACCTGGACTCCAAGGCCGGCCTGCGCAC...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACGCGGACCTCTGCGGCTaGGCCTCCTGCAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHADLCG*ASCSRR
Trigger: CCTCCGGCTGCAGGAGGCCAAGCCGCAGAGGTCCGC...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 90 bp GGCGGGCTAAGGAGGACCCACCCCACCTCCTTCGGCACCAGGTGCTaGGATGTTGCCCTCCGACGATGGATGAGAGACAAGGCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: GGLRRTHPTSFGTRC*DVALRRWMRDKASL
Trigger: CAGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAGGTGGGGTGGGTCCTCCTTAGCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 90 bp ATAGCCGTCACCGGGCCTGTGTGGCCCACGAACACCATCCGGATCTaGCAGTCAGCCTCCCACACCTTCACGGTGCTGTCCCGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: IAVTGPVWPTNTIRI*QSASHTFTVLSREA
Trigger: AGCTTCCCGGGACAGCACCGTGAAGGTGTGGGAGGCTGACTGGCAGATCCGGATGGTGTTCGTGGGCCACACAGGCCCGGTGACGGCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp CACCGTCAGGTCCCCACCCGAAGACACAATGCTGTTCCAGGTGGATaGGATGGCGACAACCGGGCCCGGGCTGTGCGCCTCCGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: HRQVPTRRHNAVPGG*DGDNRARAVRLRLE
Trigger: TTCCAAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTGGGGACCTGACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323662.9
ENST00000533108.1
ENST00000534167.5
CDS GCA 90 bp AGGGTTCAGGGATCAGCCTGCTCTTCCTTGAGCCTTGCTATGTGCTaGCCGGGCAACCATGGGGATCCCAGGCCTGCCCCAGGGCTGACG +
Preference number: 5 (lower is better)
Translates to: RVQGSACSSLSLAMC*PGNHGDPRPAPGLT
Trigger: CGTCAGCCCTGGGGCAGGCCTGGGATCCCCATGGTTGCCCGGGCAGCACATAGCAAGGCTCAAGGAAGAGCAGGCTGATCCCTGAACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS-3UTR CAA 90 bp ACATCTGCTGTAGCACCGCGGAGTTGGGCACATAGCCGGGGAAGCAGATGGGCCCACCTTGGCGGGCAGTaGCGCCAACGGCGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: TSAVAPRSWAHSRGSRWAHLGGQ*RQRRVE
Trigger: CTCTACTCGCCGTTGGCGCAACTGCCCGCCAAGGTG...GGCCCATCTGCTTCCCCGGCTATGTGCCCAACTCCGCGGTGCTACAGCAGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp GGGCCCAGCAACTTGGCTGTCCCGCACGGTCCTGCGCACCCATGCTCTTGGGATGAGCAGGCATACAGTTaGAGCGTGGGGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GPSNLAVPHGPAHPCSWDEQAYS*SVGQQH
Trigger: GTGCTGCTGCCCCACGCTCAAACTGTATGCCTGCTC...ATCCCAAGAGCATGGGTGCGCAGGACCGTGCGGGACAGCCAAGTTGCTGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCCTAGAGAGAGGTTCCTaGTCCCATCTCTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: GTLVPTMATSARPPAPAFLERGS*SHLFGS
Trigger: GCTGCCAAAGAGATGGGACAAGGAACCTCTCTCTAG...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CACGCCGTGCGCACCCCGGGGCCCTCCAAAGCAGGCGGCATCCTGCAGAAAGAAGCCCTGCAGCTGGCCTaGGAGATCACTGCTCATGTT +
Preference number: 5 (lower is better)
Translates to: HAVRTPGPSKAGGILQKEALQLA*EITAHV
Trigger: AACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGC...TTCTTTCTGCAGGATGCCGCCTGCTTTGGAGGGCCCCGGGGTGCGCACGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGAACGCTGGTGCCCACGATGGCCACCTCCGCCAGGCCTCCGGCTCCTGCCTTCCAGGTCATCATCTCCTaGAATAGGAAGCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GTLVPTMATSARPPAPAFQVIIS*NRKPSG
Trigger: CCCAGAGGGCTTCCTATTCAAGGAGATGATGACCTG...GAAGGCAGGAGCCGGAGGCCTGGCGGAGGTGGCCATCGTGGGCACCAGCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGGTCCCCCAGCTGCGCTaGGGTGCCAGCATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQVPQLR*GASIRW
Trigger: CCAGCGGATGCTGGCACCCAAGCGCAGCTGGGGGAC...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGCTGGGCCCAGCAACTaGGCTGTCCCGCACGGTCCT +
Preference number: 5 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTAGPSN*AVPHGP
Trigger: AGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCACTGTCCCAGCAGGCTaGAACCCAAACTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: SSCWLECGLREAKAQSSSTVPAG*NPNWGP
Trigger: AGGCCCCCAGTTTGGGTTCAAGCCTGCTGGGACAGT...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS TCA 90 bp AATCCCGGCGCACATCTACGAGAGTCCAGGCATGCAGATCGAAGGTaGGCACGGCCGAGCCATAGGCCGCGAAGCAGCGCAGGACGTGGT +
Preference number: 5 (lower is better)
Translates to: NPGAHLRESRHADRR*ARPSHRPRSSAGRG
Trigger: ACCACGTCCTGCGCTGCTTCGCGGCCTATGGCTCGGCCGTGCTCACCTTCGATCTGCATGCCTGGACTCTCGTAGATGTGCGCCGGGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 90 bp TGCCCCATGGAGGTTGGTGAGCCTCTGCAGTTGGGCGGAAGTCAGTaGCTCCTGGCTCATCAGTGGCAGCGGAGGGTCGTCCACCACGTC +
Preference number: 5 (lower is better)
Translates to: CPMEVGEPLQLGGSQ*LLAHQWQRRVVHHV
Trigger: GACGTGGTGGACGACCCTCCGCTGCCACTGATGAGCCAGGAGTCACTGACTTCCGCCCAACTGCAGAGGCTCACCAACCTCCATGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000534167.5
CDS GCA 90 bp ATGCTGTTCCAGGTGGATGCGATGGCGACAACCGGGCCCGGGCTGTaGGCCTCCGTTTGGAAGACAGTCTTCGACGAGAGCCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: MLFQVDAMATTGPGL*ASVWKTVFDESHSS
Trigger: GCTGGAGTGGCTCTCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 90 bp GCAGGGGAGCTACTGACCCGAAGACACAATGCTGTTCCAGGTGGATaGGATGGCGACAACCGGGCCCGGGCTGTGCGCCTCCGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: AGELLTRRHNAVPGG*DGDNRARAVRLRLE
Trigger: TTCCAAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTCAGTAGCTCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 90 bp GTCCTGAGTCAGGGTTCAGGGATCAGCCTGCTCTTCCTTGAGCCTTaGTATGTGCTGCCCGGGCAACCATGGGGATCCCAGGCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: VLSQGSGISLLFLEP*YVLPGQPWGSQACP
Trigger: GGGGCAGGCCTGGGATCCCCATGGTTGCCCGGGCAGCACATAGCAAGGCTCAAGGAAGAGCAGGCTGATCCCTGAACCCTGACTCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS-3UTR CAA 90 bp CCAGGAATCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCGAGCAGGCATACAGTTaGAGCGTGGGGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: PGIQLLVGVRAQGSQGPVEQAYS*SVGQQH
Trigger: GTGCTGCTGCCCCACGCTCAAACTGTATGCCTGCTC...GACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp TCCAGCTGCTGGTTGGAGTGCGGGCTCAGGGAAGCCAAGGCCCAGTCCAGCTCCCCTTGTCCCATCTCTTaGGCAGCAGTGGGATCCTGC +
Preference number: 5 (lower is better)
Translates to: SSCWLECGLREAKAQSSSPCPIS*AAVGSC
Trigger: GCAGGATCCCACTGCTGCCAAAGAGATGGGACAAGG...GGAGCTGGACTGGGCCTTGGCTTCCCTGAGCCCGCACTCCAACCAGCAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp CTGGGACCACTAGCCCCAGCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTAACAGGGCATCCTGGCTaGCCCCTGGCTCCGCATTTA +
Preference number: 5 (lower is better)
Translates to: LGPLAPASTAEGLGPGPLTGHPG*PLAPHL
Trigger: TAAATGCGGAGCCAGGGGCAAGCCAGGATGCCCTGT...TAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGCTGGGGCTAGTGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCCCGTGCAGCAGCTTCTaGAGCTCTGGCCGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTPCSSF*SSGRQC
Trigger: GCACTGCCGGCCAGAGCTCAAGAAGCTGCTGCACGG...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp ATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGAGCAGGCTGGGCCCAGCAACTaGGCTGTCCCGCACGGTCCT +
Preference number: 5 (lower is better)
Translates to: MLLGWWHHCVKHRPGKEQAGPSN*AVPHGP
Trigger: AGGACCGTGCGGGACAGCCAAGTTGCTGGGCCCAGC...CTGCTCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 90 bp CGAGCTTTCTCTGGGAGGCGAGCTGAGTCGGGGATCCGAGGCTGCTaGCCTCCGCATTTAGCCACATCTGCTGTAGCACCGCGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: RAFSGRRAESGIRGC*PPHLATSAVAPRSW
Trigger: CCAACTCCGCGGTGCTACAGCAGATGTGGCTAAATGCGGAGGTCAGCAGCCTCGGATCCCCGACTCAGCTCGCCTCCCAGAGAAAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000529209.1
CDS GCA 90 bp TTTGGAAGACAGTCTTCGACGAGAGCCACTCCAGCACCGACAGCGTaGCGTCCGTGTGCCCCACCACTGGCAGGTACCTGCGAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: FGRQSSTRATPAPTA*RPCAPPLAGTCEWE
Trigger: TTCCCACTCGCAGGTACCTGCCAGTGGTGGGGCACACGGACGGCACGCTGTCGGTGCTGGAGTGGCTCTCGTCGAAGACTGTCTTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528691.5
CDS-3UTR CAA 90 bp GACCAAAAATCAGAGGGCCTTGGCCACTCTGTGACCCAGCAGCTGCAGGACTGTGGCCTCAGGCAGTGCTaGTGGGGCTGCACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: DQKSEGLGHSVTQQLQDCGLRQC*WGCTVA
Trigger: TGCCACCGTGCAGCCCCACAAGCACTGCCTGAGGCC...ACAGTCCTGCAGCTGCTGGGTCACAGAGTGGCCAAGGCCCTCTGATTTTTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCGAATCCAGCTGCTGGTaGGAGTGCGGGCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: FAQCPADGTPLWVSSALGESSCW*ECGLRE
Trigger: TTCCCTGAGCCCGCACTCCAACCAGCAGCTGGATTC...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 90 bp CGTCCAAGTCCTGAGTCAGGGTTCAGGGATCAGCCTGCTCTTCCTTaGGCCTTGCTATGTGCTGCCCGGGCAACCATGGGGATCCCAGGC +
Preference number: 5 (lower is better)
Translates to: RPSPESGFRDQPALP*ALLCAARATMGIPG
Trigger: GCCTGGGATCCCCATGGTTGCCCGGGCAGCACATAGCAAGGCTCAAGGAAGAGCAGGCTGATCCCTGAACCCTGACTCAGGACTTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 90 bp CACTATGGCGTCCAAGTCCTCCTTCGGCACCAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAGAGACAAGGCCTCGCTGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: HYGVQVLLRHQVLRC*PPTMDERQGLAEAG
Trigger: GCCAGCCTCAGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAGGACTTGGACGCCATAGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323662.9
CDS GCA 90 bp AAGGAGGACCCACCCCACCTCCTTCGGCACCAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAGAGACAAGGCCTCGCTGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: KEDPPHLLRHQVLRC*PPTMDERQGLAANR
Trigger: CCTGTTTGCAGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAGGTGGGGTGGGTCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS-3UTR CAA 90 bp CAGCCATTTGGTGGCCCCATAACAAGAGCCACCGCACAGTTTGGGGTGACAGGGGGCAGGTACCGGTTCTaGTTCTTCCAGGCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: QPFGGPITRATAQFGVTGGRYRF*FFQAQA
Trigger: GGCCTGCGCCTGGAAGAACAAGAACCGGTACCTGCC...CCCTGTCACCCCAAACTGTGCGGTGGCTCTTGTTATGGGGCCACCAAATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCGGCTGTTGGCACTGTTaGGGCTGCAGTGCTGACCTC +
Preference number: 5 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTGCWHC*GCSADL
Trigger: GAGGTCAGCACTGCAGCCCAAACAGTGCCAACAGCC...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCAGATCACTGCTCATGTaGGGCAGCAGTCTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPRSLLM*GSSLSS
Trigger: GCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTCTGTGCACAGGTCTaGCGCCCTGCCAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPLCAQV*RPARPH
Trigger: GTGTGGCCTGGCAGGGCGCAAGACCTGTGCACAGAG...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp CGAACACCATCCGGATCTGCCAGTCAGCCTCCCACACCTTCACGGTaGTGTCCCGGGAAGCTGTCACCATTGCCTCTACTTCCTCGCAGT +
Preference number: 5 (lower is better)
Translates to: RTPSGSASQPPTPSR*CPGKLSPLPLLPRS
Trigger: ACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCCCGGGACAGCACCGTGAAGGTGTGGGAGGCTGACTGGCAGATCCGGATGGTGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp TTTGGAAGACAGTCTTCGACGAGAGCCACTCCAGCACCGACAGCGTaGCGTCCGTGTGCCCCACCACTGGCAGGTACCGGTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: FGRQSSTRATPAPTA*RPCAPPLAGTGSCS
Trigger: AGAACAAGAACCGGTACCTGCCAGTGGTGGGGCACACGGACGGCACGCTGTCGGTGCTGGAGTGGCTCTCGTCGAAGACTGTCTTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000533108.1
ENST00000534167.5
CDS-3UTR CAA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGCACAGCAGGCTGAGGTaGGGCCTCAGAATTGCCAGC +
Preference number: 5 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLHSRLR*GLRIAS
Trigger: GCTGGCAATTCTGAGGCCCAACCTCAGCCTGCTGTG...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCACAGCAGGCTGAGGTaGGGCCTCAGAATTGCCAGC +
Preference number: 5 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHHSRLR*GLRIAS
Trigger: GCTGGCAATTCTGAGGCCCAACCTCAGCCTGCTGTG...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCGGGAAGCTGTCACCATaGCCTCTACTTCCTCGCAGT +
Preference number: 5 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTGKLSP*PLLPRS
Trigger: ACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCCC...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTGGCAGGTACCGGTTCTaGTTCTTCCAGGCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPGRYRF*FFQAQA
Trigger: GGCCTGCGCCTGGAAGAACAAGAACCGGTACCTGCC...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp ACCCATGCTCTTGGGATGGTGGCACCACTGTGTCAAGCACCGGCCTGGGAAAGATGCGCACCCATGCTCTaGGGATGGTGGCACCACTGT +
Preference number: 5 (lower is better)
Translates to: THALGMVAPLCQAPAWERCAPML*GWWHHC
Trigger: ACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCA...TCTTTCCCAGGCCGGTGCTTGACACAGTGGTGCCACCATCCCAAGAGCATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACTGCGCACCCATGCTCTaGGGATGGTGGCACCACTGT +
Preference number: 5 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHCAPML*GWWHHC
Trigger: ACAGTGGTGCCACCATCCCAAGAGCATGGGTGCGCA...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp AAGGGAAACCTGGAGAAGTGCTGGCTTCTAGGGGCCCTGACACCCTaGAAGCTCCTTACAGGACTTGGCCCCAGCCCTGGGACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: KGNLEKCWLLGALTP*KLLTGLGPSPGTRK
Trigger: CTTTCTTGTCCCAGGGCTGGGGCCAAGTCCTGTAAGGAGCTTGCAGGGTGTCAGGGCCCCTAGAAGCCAGCACTTCTCCAGGTTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS-3UTR CAA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCTCCGAGATGGTGGTTTaGTGCAAATCCCGGCGCACA +
Preference number: 5 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTSEMVV*CKSRRT
Trigger: TGTGCGCCGGGATTTGCACAAAACCACCATCTCGGA...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACGCTGTGCGCCTCCGTTaGGAAGACAGTCTTCGACGA +
Preference number: 5 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHAVRLR*EDSLRR
Trigger: TCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAGC...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CAAGCACCGGCCTGGGAAAGAGCAGCCATTTGGTGGCCCCATAACAAGAGCCACCCTTGTCCCATCTCTTaGGCAGCAGTGGGATCCTGC +
Preference number: 5 (lower is better)
Translates to: QAPAWERAAIWWPHNKSHPCPIS*AAVGSC
Trigger: GCAGGATCCCACTGCTGCCAAAGAGATGGGACAAGG...GTGGCTCTTGTTATGGGGCCACCAAATGGCTGCTCTTTCCCAGGCCGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp AGCAGAAAACGTTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTTGCTCACAGAAGAAGTaGAGCGCGTCGATGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SRKRLLSAQRMVPRYGSPCSQKK*SASMGP
Trigger: GGGCCCCATCGACGCGCTCAACTTCTTCTGTGAGCA...AGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAACGTTTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TGGGTGGGTGGGATCGGCACTGTGACTCGGGGAGACTGGGAGAAGTGCTGGCCCACAGCATCTTTCTCTTaGACCTTTTCCCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: WVGGIGTVTRGDWEKCWPTASFS*TFSHPP
Trigger: AGGAGGGTGGGAAAAGGTCAAAGAGAAAGATGCTGT...GGGCCAGCACTTCTCCCAGTCTCCCCGAGTCACAGTGCCGATCCCACCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS GCA 90 bp AGCCTCCCACACCTTCACGGTGCTGTCCCGGGAAGCTGTCACCATTaGCTCTACTTCCTCGCAGTAAGCCAGGTCCGAGATGGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SLPHLHGAVPGSCHH*LYFLAVSQVRDGGF
Trigger: AAAACCACCATCTCGGACCTGGCTTACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCCCGGGACAGCACCGTGAAGGTGTGGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CACTCTGTGACCCAGCAGCTGCAGGACTGTCCCAGCAGGCTTGAACCCAAACTGTCCGAGATGGTGGTTTaGTGCAAATCCCGGCGCACA +
Preference number: 5 (lower is better)
Translates to: HSVTQQLQDCPSRLEPKLSEMVV*CKSRRT
Trigger: TGTGCGCCGGGATTTGCACAAAACCACCATCTCGGA...CAGTTTGGGTTCAAGCCTGCTGGGACAGTCCTGCAGCTGCTGGGTCACAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GTCTGCAAACTCCTGGTCTCACCTGCATCGACCCGGAAGGCTCATCCTGGGACCCTAGAGAGAGGTTCCTaGTCCCATCTCTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: VCKLLVSPASTRKAHPGTLERGS*SHLFGS
Trigger: GCTGCCAAAGAGATGGGACAAGGAACCTCTCTCTAG...GGTCCCAGGATGAGCCTTCCGGGTCGATGCAGGTGAGACCAGGAGTTTGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp CTTGGCCTTCTGCAGTGGGAGGATGCGGTAGTGCCTGGAGGTGAAGAGGCAGGTCAGGTCATCATCTCCTaGAATAGGAAGCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LGLLQWEDAVVPGGEEAGQVIIS*NRKPSG
Trigger: CCCAGAGGGCTTCCTATTCAAGGAGATGATGACCTG...ACCTGCCTCTTCACCTCCAGGCACTACCGCATCCTCCCACTGCAGAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GCAAGACAGTGGGCAGCTTGGGGTACAGCACACACATCCCGGGTCTCTCTCTCCAGGAAGGAGAATTGCTaGAATCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ARQWAAWGTAHTSRVSLSRKENC*NPGGRG
Trigger: ACCTCTGCCTCCCGGATTCAAGCAATTCTCCTTCCT...GGAGAGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCACTGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS TCA 90 bp ACAGATGGCAGGAGAACCCTGAGATACCAGGGGCGAGGCCCTCAGTaGGCATCAGCTCTGACAAACGAGAAGGGAAACCTGGAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TDGRRTLRYQGRGPQ*ASALTNEKGNLEKC
Trigger: GCACTTCTCCAGGTTTCCCTTCTCGTTTGTCAGAGCTGATGCTCACTGAGGGCCTCGCCCCTGGTATCTCAGGGTTCTCCTGCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS-3UTR CAA 90 bp GGCTGTGGGCTGGCCCAGGACACGTTCTCTAAGGTCAGCCCGCATCTCAACACCCCTGCCTTTGCTGTCTaGGAGATAGCCATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GCGLAQDTFSKVSPHLNTPAFAV*EIAIKK
Trigger: CTTCTTTATGGCTATCTCCAAGACAGCAAAGGCAGG...GGTGTTGAGATGCGGGCTGACCTTAGAGAACGTGTCCTGGGCCAGCCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TTTGCTCAGTGCCCAGCGGATGGTACCCCGCTATGGGTCTCCTCTGCCCTAGGCACAGCATCTTTCTCTTaGACCTTTTCCCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: FAQCPADGTPLWVSSALGTASFS*TFSHPP
Trigger: AGGAGGGTGGGAAAAGGTCAAAGAGAAAGATGCTGT...GCCTAGGGCAGAGGAGACCCATAGCGGGGTACCATCCGCTGGGCACTGAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 90 bp GTCAGGCTTTGCCACTGTTGGCTGCTGGTCAAAAAGGGCAGGACCTaGGACGGCTCCGTGAAAGTCAACTCATTCTTTTCGGTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VRLCHCWLLVKKGRT*DGSVKVNSFFSVSS
Trigger: GCTGCTCACCGAAAAGAATGAGTTGACTTTCACGGAGCCGTCGCAGGTCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp AAGTCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGAACGCGCCGGGACAGCTaGTCCTGGCCCCAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: KSEATDTGGKSLLRQHKRTRRDS*SWPQKP
Trigger: GGGCTTCTGGGGCCAGGACAAGCTGTCCCGGCGCGT...TCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGAGAAGCTGGGATGCCTaGCTGTGCACCCTACGGTGG +
Preference number: 5 (lower is better)
Translates to: GGILQKEILWTLFPMQALRSWDA*LCTLRW
Trigger: CCACCGTAGGGTGCACAGCAAGGCATCCCAGCTTCT...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp AGATCACTGCTCATGTTGGGCAGCAGTCTCAGTAGCACCTGCAGGATGTGCACAGCCCTGCAGCTGGCCTaGGAGATCACTGCTCATGTT +
Preference number: 5 (lower is better)
Translates to: RSLLMLGSSLSSTCRMCTALQLA*EITAHV
Trigger: AACATGAGCAGTGATCTCCAAGGCCAGCTGCAGGGC...TGTGCACATCCTGCAGGTGCTACTGAGACTGCTGCCCAACATGAGCAGTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGCACCTTGGCGGGCAGTaGCGCCAACGGCGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQHLGGQ*RQRRVE
Trigger: CTCTACTCGCCGTTGGCGCAACTGCCCGCCAAGGTG...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp GGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGCTTCTCCCCCATCCATaGGAGCAGCTTCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GGILQKEILWTLFPMQALLLPHP*EQLPLP
Trigger: TGGCAGAGGAAGCTGCTCCAATGGATGGGGGAGAAG...CAAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGCTCTGTGCACAGGTCTaGCGCCCTGCCAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQLCAQV*RPARPH
Trigger: GTGTGGCCTGGCAGGGCGCAAGACCTGTGCACAGAG...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGGGGGGCTGGTCCAGGTaGAGCAAGTGTACGAGCAGG +
Preference number: 5 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRGGWSR*SKCTSR
Trigger: CCTGCTCGTACACTTGCTCAACCTGGACCAGCCCCC...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCAGGGCTCAGGCAGGCTaGTATCAACTCCAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGRAQAG*YQLQRA
Trigger: GGCCCTCTGGAGTTGATACAAGCCTGCCTGAGCCCT...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534167.5
CDS-3UTR CAA 90 bp AGGCGGCATCCTGCAGAAAGAAATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGGAAGCTGTCACCATaGCCTCTACTTCCTCGCAGT +
Preference number: 5 (lower is better)
Translates to: RRHPAERNSLDFIPDAGLGKLSP*PLLPRS
Trigger: ACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCCC...AAGGCCTGCATCGGGAATAAAGTCCAGAGAATTTCTTTCTGCAGGATGCCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp AATTCTCTGGACTTTATTCCCGATGCAGGCCTTGGCCAAATACCAATGACAGGCGCTGTGCGCCTCCGTTaGGAAGACAGTCTTCGACGA +
Preference number: 5 (lower is better)
Translates to: NSLDFIPDAGLGQIPMTGAVRLR*EDSLRR
Trigger: TCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAGC...GCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCCAGAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGACAGGGCATCCTGGCTaGCCCCTGGCTCCGCATTTA +
Preference number: 5 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRTGHPG*PLAPHL
Trigger: TAAATGCGGAGCCAGGGGCAAGCCAGGATGCCCTGT...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp ATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGGTGTAAAAGCCGGCAGGCTTTGCCACTGTaGGCTGCTGGTCAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: IQEGNHCSDNTKDRCKSRQALPL*AAGQKG
Trigger: CCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTG...CCGGCTTTTACACCTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TCAGAGGCTACAGATACAGGAGGGAAATCACTGCTCAGACAACACAAAAGACAGAGGAAGGAGAATTGCTaGAATCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SEATDTGGKSLLRQHKRQRKENC*NPGGRG
Trigger: ACCTCTGCCTCCCGGATTCAAGCAATTCTCCTTCCT...CTGTCTTTTGTGTTGTCTGAGCAGTGATTTCCCTCCTGTATCTGTAGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGGCTGAGGAAGGAGAATaGCTTGAATCCGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEAEEGE*LESGRQ
Trigger: CTGCCTCCCGGATTCAAGCAATTCTCCTTCCTCAGC...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS-3UTR CAA 90 bp TGTGGAGAAGCGATTCTAACCAGAGCCATCAAGAAGAAACTAGTAAAGTCAGAGTGGTGTGATCTCTGCTaGCTGCAACCTCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: CGEAILTRAIKKKLVKSEWCDLC*LQPPPP
Trigger: AGGAGGTGGAGGTTGCAGCAAGCAGAGATCACACCA...CTCTGACTTTACTAGTTTCTTCTTGATGGCTCTGGTTAGAATCGCTTCTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 90 bp CCCGGGCGCACCGGCGCCAGCAGACGGCCCACGCGCCGGGACAGCTaGTCCTGGCCCCAGAAGCCCAGCGCTACCTCGCCCACCTGCGCC +
Preference number: 6 (lower is better)
Translates to: PGRTGASRRPTRRDS*SWPQKPSATSPTCA
Trigger: GGCGCAGGTGGGCGAGGTAGCGCTGGGCTTCTGGGGCCAGGACAAGCTGTCCCGGCGCGTGGGCCGTCTGCTGGCGCCGGTGCGCCCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp GCGCACGCGCACACGAGGCGCGTAGGCAGCGACTGGTaGGCAGGCGCGGGCAACGCGGGCGCCACCTGCACG +
Preference number: 6 (lower is better)
Translates to: AHAHTRRVGSDW*AGAGNAGATCT
Trigger: CGTGCAGGTGGCGCCCGCGTTGCCCGCGCCTGCGCACCAGTCGCTGCCTACGCGCCTCGTGTGCGCGTGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CCA 72 bp CGAGCGCAGCCCGGCTGCCACCTCCAGGCGGCGCAGTaGTTCCAGCCCATGCGTCAGGCGCGCCGCGCGCAG +
Preference number: 6 (lower is better)
Translates to: RAQPGCHLQAAQ*FQPMRQARRAQ
Trigger: CTGCGCGCGGCGCGCCTGACGCATGGGCTGGAACCACTGCGCCGCCTGGAGGTGGCAGCCGGGCTGCGCTCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CCA 72 bp TCGGCGCACGCGCACACGAGGCGCGTAGGCAGCGACTaGTGCGCAGGCGCGGGCAACGCGGGCGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: SAHAHTRRVGSD*CAGAGNAGATC
Trigger: GCAGGTGGCGCCCGCGTTGCCCGCGCCTGCGCACCAGTCGCTGCCTACGCGCCTCGTGTGCGCGTGCGCCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CCA 72 bp CGCGGTGCAGCACGCTCATGGGGCAGCGCGCCGCGTTaGCGCGGACCAGGTGCCCAGCCCTGGTCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: RGAARSWGSAPR*RGPGAQPWSAA
Trigger: GGCTGCTGACCAGGGCTGGGCACCTGGTCCGCGCCAACGCGGCGCGCTGCCCCATGAGCGTGCTGCACCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 72 bp ACCCACCGGGTCCTGCGCCACCGAGCGCAGCCCGGCTaGCACCTCCAGGCGGCGCAGTGGTTCCAGCCCATG +
Preference number: 6 (lower is better)
Translates to: THRVLRHRAQPG*HLQAAQWFQPM
Trigger: CATGGGCTGGAACCACTGCGCCGCCTGGAGGTGGCAGCCGGGCTGCGCTCGGTGGCGCAGGACCCGGTGGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp CCGTCCAGCACCACGAAGCGTCCACCCACCGGGTCCTaGGCCACCGAGCGCAGCCCGGCTGCCACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PSSTTKRPPTGS*ATERSPAATSR
Trigger: CCTGGAGGTGGCAGCCGGGCTGCGCTCGGTGGCGCAGGACCCGGTGGGTGGACGCTTCGTGGTGCTGGACGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CCA 72 bp TGCGCAGGCGCGGGCAACGCGGGCGCCACCTGCACGTaGAGCACCTTGGCGGGCAGTTGCGCCAACGGCGAG +
Preference number: 6 (lower is better)
Translates to: CAGAGNAGATCT*STLAGSCANGE
Trigger: CTCGCCGTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGCAGGTGGCGCCCGCGTTGCCCGCGCCTGCGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp GCTGCCACCTCCAGGCGGCGCAGTGGTTCCAGCCCATaGGTCAGGCGCGCCGCGCGCAGCTCGGCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: AATSRRRSGSSP*VRRAARSSALF
Trigger: GAAGAGAGCCGAGCTGCGCGCGGCGCGCCTGACGCATGGGCTGGAACCACTGCGCCGCCTGGAGGTGGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp AAGCCCAGCGCTACCTCGCCCACCTGCGCCGCCGCCTaGAGGTCCCAGGTGCGTAGCGTCCCGTCCTGCGAG +
Preference number: 6 (lower is better)
Translates to: KPSATSPTCAAA*RSQVRSVPSCE
Trigger: CTCGCAGGACGGGACGCTACGCACCTGGGACCTGCAGGCGGCGGCGCAGGTGGGCGAGGTAGCGCTGGGCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp GACTGGTGCGCAGGCGCGGGCAACGCGGGCGCCACCTaGACGTGGAGCACCTTGGCGGGCAGTTGCGCCAAC +
Preference number: 6 (lower is better)
Translates to: DWCAGAGNAGAT*TWSTLAGSCAN
Trigger: GTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGCAGGTGGCGCCCGCGTTGCCCGCGCCTGCGCACCAGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CCA 72 bp GCCAGCAGACGGCCCACGCGCCGGGACAGCTTGTCCTaGCCCCAGAAGCCCAGCGCTACCTCGCCCACCTGC +
Preference number: 6 (lower is better)
Translates to: ASRRPTRRDSLS*PQKPSATSPTC
Trigger: GCAGGTGGGCGAGGTAGCGCTGGGCTTCTGGGGCCAGGACAAGCTGTCCCGGCGCGTGGGCCGTCTGCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 72 bp GGCGCCAGCAGCGTCTCCTGTGCCCAGCCGTCTTCCTaGTGCAGGTGCAGGCGGCCCGCGCCGTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: GASSVSCAQPSS*CRCRRPAPSST
Trigger: GGTGCTGGACGGCGCGGGCCGCCTGCACCTGCACAAGGAAGACGGCTGGGCACAGGAGACGCTGCTGGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 72 bp CACGGCTGCCGCGCAGTCCTCCGGCTCCAGCAGCAGTaGGCTCACTATGCGCCCGGTGGCCGCCGACAGGAG +
Preference number: 6 (lower is better)
Translates to: HGCRAVLRLQQQ*AHYAPGGRRQE
Trigger: CTCCTGTCGGCGGCCACCGGGCGCATAGTGAGCTCACTGCTGCTGGAGCCGGAGGACTGCGCGGCAGCCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000534167.5
CDS GCA 72 bp GCCAGCAGCGTCTCCTGTGCCCAGCCGTCTTCCTTGTaGAGGTGCAGGCGGCCCGCGCCGTCCAGCACCACG +
Preference number: 6 (lower is better)
Translates to: ASSVSCAQPSSL*RCRRPAPSSTT
Trigger: CGTGGTGCTGGACGGCGCGGGCCGCCTGCACCTGCACAAGGAAGACGGCTGGGCACAGGAGACGCTGCTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp GCGAGTAGAGCTCGCGTACGCGCCACAGCTGCATGCTaGTCGCGCACAGGGACAGCACCGGCCAGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: ASRARVRATAAC*SRTGTAPASPG
Trigger: GCCCGGGCTGGCCGGTGCTGTCCCTGTGCGCGAGCAGCATGCAGCTGTGGCGCGTACGCGAGCTCTACTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp TACCTGCGAGTGGGAAGAGCCTGTTGGCGCGGACCCTaGCGCTCCTTCCGCCCGCCAGACCCTCGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: YLRVGRACWRGP*RSFRPPDPRRL
Trigger: GAGCCGGCGAGGGTCTGGCGGGCGGAAGGAGCGGCAGGGTCCGCGCCAACAGGCTCTTCCCACTCGCAGGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528691.5
CDS CCA 72 bp CGGGCAACGCGGGCGCCACCTGCACGTGGAGCACCTTaGCGGGCAGTTGCGCCAACGGCGAGTAGAGCTCGC +
Preference number: 6 (lower is better)
Translates to: RATRAPPARGAP*RAVAPTASRAR
Trigger: GCGAGCTCTACTCGCCGTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGCAGGTGGCGCCCGCGTTGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 90 bp AGCCGGACAGGCGCCAGCAGCGTCTCCTGTGCCCAGCCGTCTTCCTaGTGCAGGTGCAGGCGGCCCGCGCCGTCCAGCACCACGAAGCGT +
Preference number: 6 (lower is better)
Translates to: SRTGASSVSCAQPSS*CRCRRPAPSSTTKR
Trigger: ACGCTTCGTGGTGCTGGACGGCGCGGGCCGCCTGCACCTGCACAAGGAAGACGGCTGGGCACAGGAGACGCTGCTGGCGCCTGTCCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp AGACGCATGAGCCTGCCTGTTGGGCTCGGGGGCGGGTaGAGTGCTGACCCTCGCAGCACCAGGCGGCGACCA +
Preference number: 6 (lower is better)
Translates to: RRMSLPVGLGGG*SADPRSTRRRP
Trigger: TGGTCGCCGCCTGGTGCTGCGAGGGTCAGCACTGCACCCGCCCCCGAGCCCAACAGGCAGGCTCATGCGTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp GCCGCCTGCAGGTCCCAGGTGCGTAGCGTCCCGTCCTaGGAGGCCGACAACACCAGGGTCGTGTTCGGGAGC +
Preference number: 6 (lower is better)
Translates to: AACRSQVRSVPS*EADNTRVVFGS
Trigger: GCTCCCGAACACGACCCTGGTGTTGTCGGCCTCGCAGGACGGGACGCTACGCACCTGGGACCTGCAGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CCA 72 bp CGGGCGCGGGCGCGCGGGGTCAGGCTTTGCCACTGTTaGCTGCTGGTCAAAAAGGGCAGGACCTGCGACGGC +
Preference number: 6 (lower is better)
Translates to: RARARGVRLCHC*LLVKKGRTCDG
Trigger: GCCGTCGCAGGTCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCGCGCCCGCGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 72 bp GCGGGCGCGGGCGCGCGGGGTCAGGCTTTGCCACTGTaGGCTGCTGGTCAAAAAGGGCAGGACCTGCGACGG +
Preference number: 6 (lower is better)
Translates to: AGAGARGQALPL*AAGQKGQDLRR
Trigger: CCGTCGCAGGTCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCGCGCCCGCGCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 72 bp CCACAGCCGGCGGGCGCGGGCGCGCGGGGTCAGGCTTaGCCACTGTTGGCTGCTGGTCAAAAAGGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: PQPAGAGARGQA*PLLAAGQKGQD
Trigger: GTCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCGCGCCCGCGCCCGCCGGCTGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 72 bp GGGCGCCACCTGCACGTGGAGCACCTTGGCGGGCAGTaGCGCCAACGGCGAGTAGAGCTCGCGTACGCGCCA +
Preference number: 6 (lower is better)
Translates to: GRHLHVEHLGGQ*RQRRVELAYAP
Trigger: TGGCGCGTACGCGAGCTCTACTCGCCGTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGCAGGTGGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 90 bp CCACAGCCGGCGGGCGCGGGCGCGCGGGGTCAGGCTTTGCCACTGTaGGCTGCTGGTCAAAAAGGGCAGGACCTGCGACGGCTCCGTGAA +
Preference number: 6 (lower is better)
Translates to: PQPAGAGARGQALPL*AAGQKGQDLRRLRE
Trigger: TTCACGGAGCCGTCGCAGGTCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCGCGCCCGCGCCCGCCGGCTGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 90 bp GGGCAACGCGGGCGCCACCTGCACGTGGAGCACCTTGGCGGGCAGTaGCGCCAACGGCGAGTAGAGCTCGCGTACGCGCCACAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: GQRGRHLHVEHLGGQ*RQRRVELAYAPQLH
Trigger: ATGCAGCTGTGGCGCGTACGCGAGCTCTACTCGCCGTTGGCGCAACTGCCCGCCAAGGTGCTCCACGTGCAGGTGGCGCCCGCGTTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp CGCGGGCGCGCGGGGTCAGGCTTTGCCACTGTTGGCTaGTGGTCAAAAAGGGCAGGACCTGCGACGGCTCCG +
Preference number: 6 (lower is better)
Translates to: RGRAGSGFATVG*WSKRAGPATAP
Trigger: CGGAGCCGTCGCAGGTCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCAAAGCCTGACCCCGCGCGCCCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp CGCAGTCCTCCGGCTCCAGCAGCAGTGAGCTCACTATaGGCCCGGTGGCCGCCGACAGGAGGTAGACCGAGC +
Preference number: 6 (lower is better)
Translates to: RSPPAPAAVSSL*ARWPPTGGRPS
Trigger: GCTCGGTCTACCTCCTGTCGGCGGCCACCGGGCGCATAGTGAGCTCACTGCTGCTGGAGCCGGAGGACTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp GCGCAGGCCACAGAGCTGCAGCGCAACTCGCCCCAGTaGTGGCGCACGATCTCCCAGGAGGAGAAGGCGCCT +
Preference number: 6 (lower is better)
Translates to: AQATELQRNSPQ*WRTISQEEKAP
Trigger: AGGCGCCTTCTCCTCCTGGGAGATCGTGCGCCAGCACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS CCA 72 bp GCCCCCTCACCAGTGATGTGGTCCGTGGGGTCGTCCTaGGGCCGGTGGTCTAATCGCGGACTGTCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: APSPVMWSVGSS*GRWSNRGLSPR
Trigger: CCTGGGCGACAGTCCGCGATTAGACCACCGGCCCCAGGACGACCCCACGGACCACATCACTGGTGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CCA 72 bp CGTCCGTGTGCCCCACCACTGGCAGGTACCTGCGAGTaGGAAGAGCCTGTTGGCGCGGACCCTGCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: RPCAPPLAGTCE*EEPVGADPAAP
Trigger: AGGAGCGGCAGGGTCCGCGCCAACAGGCTCTTCCCACTCGCAGGTACCTGCCAGTGGTGGGGCACACGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528691.5
CDS GCA 72 bp TGGCCTGGGGCGCCACAACCACAGGGCATCCTGGCTTaGCCCTGGCTGCAGAGGGGCAAGAGATGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: WPGAPQPQGILA*PWLQRGKRWCL
Trigger: CAGGCACCATCTCTTGCCCCTCTGCAGCCAGGGGCAAGCCAGGATGCCCTGTGGTTGTGGCGCCCCAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000529209.1
CDS GCA 72 bp AACCGGAGCTGGGCGGTGGCTGGGCTTCACCCATGCTaGCCCCTCACCAGTGATGTGGTCCGTGGGGTCGTC +
Preference number: 6 (lower is better)
Translates to: NRSWAVAGLHPC*PLTSDVVRGVV
Trigger: GACGACCCCACGGACCACATCACTGGTGAGGGGGCAGCATGGGTGAAGCCCAGCCACCGCCCAGCTCCGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 72 bp GGCGGGATCCCAGCGCCAGCACCAGGTCTCCACTGTTaGTGCAGAAAGCCAGGGCCGCAGGAGGCGGTTCTC +
Preference number: 6 (lower is better)
Translates to: GGIPAPAPGLHC*CRKPGPQEAVL
Trigger: GAGAACCGCCTCCTGCGGCCCTGGCTTTCTGCAGCAACAGTGGAGACCTGGTGCTGGCGCTGGGATCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533108.1
CDS CCA 72 bp CGGCTCTCTTCTCCTTTTCCACGACTTCGTGGAGGCTaGTGCGCAGAAGCAGCCACAGCCGGCGGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: RLSSPFPRLRGG*CAEAATAGGRG
Trigger: CCCGCGCCCGCCGGCTGTGGCTGCTTCTGCGCACCAGCCTCCACGAAGTCGTGGAAAAGGAGAAGAGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp CCTCGCAGCACCAGGCGGCGACCACCTGAACGGAACTaGCAGAGCGCCAGGCTGCTGTTCATCTCCGCAACG +
Preference number: 6 (lower is better)
Translates to: PRSTRRRPPERN*QSARLLFISAT
Trigger: CGTTGCGGAGATGAACAGCAGCCTGGCGCTCTGGCAGTTCCGTTCAGGTGGTCGCCGCCTGGTGCTGCGAGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp GTCCCCACCCGAAGACACAATGCTGTTCCAGGTGGATaGGATGGCGACAACCGGGCCCGGGCTGTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: VPTRRHNAVPGG*DGDNRARAVRL
Trigger: GAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323662.9
ENST00000533108.1
ENST00000534167.5
CDS GCA 72 bp AGGGCTGAGCAGGCCTGCATGGGACCTGAGGCTGGCTaGCCCATGGAGGTTGGTGAGCCTCTGCAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: RAEQACMGPEAG*PMEVGEPLQLG
Trigger: GCCCAACTGCAGAGGCTCACCAACCTCCATGGGGCAGCCAGCCTCAGGTCCCATGCAGGCCTGCTCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525150.5
ENST00000528691.5
ENST00000534167.5
CDS GCA 72 bp GGGATCCCAGCGCCAGCACCAGGTCTCCACTGTTGCTaGAGAAAGCCAGGGCCGCAGGAGGCGGTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: GIPAPAPGLHCC*RKPGPQEAVLS
Trigger: GCTGAGAACCGCCTCCTGCGGCCCTGGCTTTCTGCAGCAACAGTGGAGACCTGGTGCTGGCGCTGGGATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533108.1
CDS CCA 72 bp CCAGTGATGTGGTCCGTGGGGTCGTCCTGGGGCCGGTaGTCTAATCGCGGACTGTCGCCCAGGCCAAACTGC +
Preference number: 6 (lower is better)
Translates to: PVMWSVGSSWGR*SNRGLSPRPNC
Trigger: GCAGTTTGGCCTGGGCGACAGTCCGCGATTAGACCACCGGCCCCAGGACGACCCCACGGACCACATCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS CCA 72 bp TTCCTTGAGCCTTGCTATGTGCTGCCCGGGCAACCATaGGGATCCCAGGCCTGCCCCAGGGCTGACGGCTGG +
Preference number: 6 (lower is better)
Translates to: FLEPCYVLPGQP*GSQACPRADGW
Trigger: CCAGCCGTCAGCCCTGGGGCAGGCCTGGGATCCCCATGGTTGCCCGGGCAGCACATAGCAAGGCTCAAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CAA 72 bp CCAACCCCAAACGGGTGTGCCAGGGCTCAGGCAGGCTaGTATCAACTCCAGAGGGCCCCACACCGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PTPNGCARAQAG*YQLQRAPHRQA
Trigger: GGCCTGGCGGTGTGGGGCCCTCTGGAGTTGATACAAGCCTGCCTGAGCCCTGGCACACCCGTTTGGGGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525150.5
ENST00000528691.5
ENST00000534167.5
CDS CAA 72 bp AGGCGGGATCCCAGCGCCAGCACCAGGTCTCCACTGTaGCTGCAGAAAGCCAGGGCCGCAGGAGGCGGTTCT +
Preference number: 6 (lower is better)
Translates to: RRDPSASTRSPL*LQKARAAGGGS
Trigger: AGAACCGCCTCCTGCGGCCCTGGCTTTCTGCAGCAACAGTGGAGACCTGGTGCTGGCGCTGGGATCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533108.1
CDS CAA 90 bp GGTGGATGCGATGGCGACAACCGGGCCCGGGCTGTGCGCCTCCGTTaGGAAGACAGTCTTCGACGAGAGCCACTCCAGCACCGACAGCGT +
Preference number: 6 (lower is better)
Translates to: GGCDGDNRARAVRLR*EDSLRREPLQHRQR
Trigger: ACGCTGTCGGTGCTGGAGTGGCTCTCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS TCA 72 bp CAGGTGACAGTGCCAGGAATATGCTGGGGGAGGGGCTaGGGCCTGCCTGGGCACCTGGTGTACGTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: QVTVPGICWGRG*GLPGHLVYVRV
Trigger: CACCCTCACGTACACCAGGTGCCCAGGCAGGCCTCAGCCCCTCCCCCAGCATATTCCTGGCACTGTCACCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS GCA 72 bp ACCGGGCCTGTGTGGCCCACGAACACCATCCGGATCTaGCAGTCAGCCTCCCACACCTTCACGGTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: TGPVWPTNTIRI*QSASHTFTVLS
Trigger: GGACAGCACCGTGAAGGTGTGGGAGGCTGACTGGCAGATCCGGATGGTGTTCGTGGGCCACACAGGCCCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS GCA 72 bp CAGGTGGATGCGATGGCGACAACCGGGCCCGGGCTGTaGGCCTCCGTTTGGAAGACAGTCTTCGACGAGAGC +
Preference number: 6 (lower is better)
Translates to: QVDAMATTGPGL*ASVWKTVFDES
Trigger: GCTCTCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 72 bp GCCAGGGCCGCAGGAGGCGGTTCTCAGCAGTCCAGATaGGAACGGTGCAGTCCAGGCTGGAGCAGGCATACA +
Preference number: 6 (lower is better)
Translates to: ARAAGGGSQQSR*ERCSPGWSRHT
Trigger: TGTATGCCTGCTCCAGCCTGGACTGCACCGTTCGCATCTGGACTGCTGAGAACCGCCTCCTGCGGCCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533108.1
CDS CCA 72 bp TCAGGTCCCCACCCGAAGACACAATGCTGTTCCAGGTaGATGCGATGGCGACAACCGGGCCCGGGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: SGPHPKTQCCSR*MRWRQPGPGCA
Trigger: CGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTGGGGACCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323662.9
ENST00000533108.1
ENST00000534167.5
CDS CAA 72 bp GATGGCGACAACCGGGCCCGGGCTGTGCGCCTCCGTTaGGAAGACAGTCTTCGACGAGAGCCACTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: DGDNRARAVRLR*EDSLRREPLQH
Trigger: GTGCTGGAGTGGCTCTCGTCGAAGACTGTCTTCCAAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS CAA 90 bp CTGAGCAGGCCTGCATGGGACCTGAGGCTGGCTGCCCCATGGAGGTaGGTGAGCCTCTGCAGTTGGGCGGAAGTCAGTGACTCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LSRPAWDLRLAAPWR*VSLCSWAEVSDSWL
Trigger: GAGCCAGGAGTCACTGACTTCCGCCCAACTGCAGAGGCTCACCAACCTCCATGGGGCAGCCAGCCTCAGGTCCCATGCAGGCCTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525150.5
ENST00000528691.5
ENST00000534167.5
CDS TCA 72 bp CTGCCCCTTGCCTCGAGCTTTCTCTGGGAGGCGAGCTaGGTCGGGGATCCGAGGCTGCTGACCTCCGCATTT +
Preference number: 6 (lower is better)
Translates to: LPLASSFLWEAS*VGDPRLLTSAF
Trigger: AAATGCGGAGGTCAGCAGCCTCGGATCCCCGACTCAGCTCGCCTCCCAGAGAAAGCTCGAGGCAAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000529209.1
CDS GCA 72 bp ACCGGTTCTTGTTCTTCCAGGCGCAGGCCACAGAGCTaGAGCGCAACTCGCCCCAGTGCTGGCGCACGATCT +
Preference number: 6 (lower is better)
Translates to: TGSCSSRRRPQS*SATRPSAGARS
Trigger: AGATCGTGCGCCAGCACTGGGGCGAGTTGCGCTGCAGCTCTGTGGCCTGCGCCTGGAAGAACAAGAACCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 72 bp GAGAGCCACTCCAGCACCGACAGCGTGCCGTCCGTGTaGCCCACCACTGGCAGGTACCGGTTCTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: ESHSSTDSVPSV*PTTGRYRFLFF
Trigger: GAAGAACAAGAACCGGTACCTGCCAGTGGTGGGGCACACGGACGGCACGCTGTCGGTGCTGGAGTGGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000533108.1
ENST00000534167.5
CDS GCA 72 bp GCAGGAGCCGCAGGAGGCGGTTCTCAGCAGTCCAGATaGGAACGGTGCAGTCCAGGCTGGAGCAGGCATACA +
Preference number: 6 (lower is better)
Translates to: AGAAGGGSQQSR*ERCSPGWSRHT
Trigger: TGTATGCCTGCTCCAGCCTGGACTGCACCGTTCGCATCTGGACTGCTGAGAACCGCCTCCTGCGGCTCCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000534167.5
CDS GCA 72 bp CTACTGACCCGAAGACACAATGCTGTTCCAGGTGGATaGGATGGCGACAACCGGGCCCGGGCTGTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: LLTRRHNAVPGG*DGDNRARAVRL
Trigger: GAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTCAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 72 bp GGATCAGCCTGCTCTTCCTTGAGCCTTGCTATGTGCTaGCCGGGCAACCATGGGGATCCCAGGCCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: GSACSSLSLAMC*PGNHGDPRPAP
Trigger: TGGGGCAGGCCTGGGATCCCCATGGTTGCCCGGGCAGCACATAGCAAGGCTCAAGGAAGAGCAGGCTGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CCA 72 bp TCCCAGGAGGAGAAGGCGCCTTCGAGATCCGTGAGGTaGCTGTACAGGTGCAGACAGCAAGGCTGCGGCGCA +
Preference number: 6 (lower is better)
Translates to: SQEEKAPSRSVR*LYRCRQQGCGA
Trigger: TGCGCCGCAGCCTTGCTGTCTGCACCTGTACAGCCACCTCACGGATCTCGAAGGCGCCTTCTCCTCCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS CCA 72 bp CACCCGAAGACACAATGCTGTTCCAGGTGGATGCGATaGCGACAACCGGGCCCGGGCTGTGCGCCTCCGTTT +
Preference number: 6 (lower is better)
Translates to: HPKTQCCSRWMR*RQPGPGCAPPF
Trigger: AAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323662.9
ENST00000533108.1
ENST00000534167.5
CDS CCA 72 bp GACCCGAAGACACAATGCTGTTCCAGGTGGATGCGATaGCGACAACCGGGCCCGGGCTGTGCGCCTCCGTTT +
Preference number: 6 (lower is better)
Translates to: DPKTQCCSRWMR*RQPGPGCAPPF
Trigger: AAACGGAGGCGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CCA 72 bp GGAGCTACTGACCCGAAGACACAATGCTGTTCCAGGTaGATGCGATGGCGACAACCGGGCCCGGGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: GATDPKTQCCSR*MRWRQPGPGCA
Trigger: CGCACAGCCCGGGCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTCAGTAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CAA 90 bp TGGATGAGAGACAAGGCCTCGCTGAGGCTGGCTGCCCCATGGAGGTaGGTGAGCCTCTGCAGTTGGGCGGAAGTCAGTGACTCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: WMRDKASLRLAAPWR*VSLCSWAEVSDSWL
Trigger: GAGCCAGGAGTCACTGACTTCCGCCCAACTGCAGAGGCTCACCAACCTCCATGGGGCAGCCAGCCTCAGCGAGGCCTTGTCTCTCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323662.9
CDS TCA 72 bp GCACATCTACGAGAGTCCAGGCATGCAGATCGAAGGTaGGCACGGCCGAGCCATAGGCCGCGAAGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: AHLRESRHADRR*ARPSHRPRSSA
Trigger: TGCGCTGCTTCGCGGCCTATGGCTCGGCCGTGCTCACCTTCGATCTGCATGCCTGGACTCTCGTAGATGTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 72 bp CGATCTCCCAGGAGGAGAAGGCGCCTTCGAGATCCGTaGGGTGGCTGTACAGGTGCAGACAGCAAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: RSPRRRRRLRDP*GGCTGADSKAA
Trigger: CGCAGCCTTGCTGTCTGCACCTGTACAGCCACCTCACGGATCTCGAAGGCGCCTTCTCCTCCTGGGAGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS TCA 72 bp GAGGTTGGTGAGCCTCTGCAGTTGGGCGGAAGTCAGTaGCTCCTGGCTCATCAGTGGCAGCGGAGGGTCGTC +
Preference number: 6 (lower is better)
Translates to: EVGEPLQLGGSQ*LLAHQWQRRVV
Trigger: GACGACCCTCCGCTGCCACTGATGAGCCAGGAGTCACTGACTTCCGCCCAACTGCAGAGGCTCACCAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323662.9
ENST00000525150.5
ENST00000528691.5
ENST00000533108.1
ENST00000534167.5
CDS TCA 72 bp TCTGGGAGGCGAGCTGAGTCGGGGATCCGAGGCTGCTaGCCTCCGCATTTAGCCACATCTGCTGTAGCACCG +
Preference number: 6 (lower is better)
Translates to: SGRRAESGIRGC*PPHLATSAVAP
Trigger: CGGTGCTACAGCAGATGTGGCTAAATGCGGAGGTCAGCAGCCTCGGATCCCCGACTCAGCTCGCCTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000529209.1
CDS TCA 72 bp GCTCTGTGGCGGCCTGGCCTTTGGCAGGGGAGCTACTaGCCCGAAGACACAATGCTGTTCCAGGTGGATGCG +
Preference number: 6 (lower is better)
Translates to: ALWRPGLWQGSY*PEDTMLFQVDA
Trigger: CGCATCCACCTGGAACAGCATTGTGTCTTCGGGTCAGTAGCTCCCCTGCCAAAGGCCAGGCCGCCACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 72 bp CCACCCCACCTCCTTCGGCACCAGGTGCTGAGATGTTaGCCTCCGACGATGGATGAGAGACAAGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: PPHLLRHQVLRC*PPTMDERQGLA
Trigger: AGCGAGGCCTTGTCTCTCATCCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAGGTGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CCA 72 bp ATGAGAGACAAGGCCTCGCTGAGGCTGGCTGCCCCATaGAGGTTGGTGAGCCTCTGCAGTTGGGCGGAAGTC +
Preference number: 6 (lower is better)
Translates to: MRDKASLRLAAP*RLVSLCSWAEV
Trigger: GACTTCCGCCCAACTGCAGAGGCTCACCAACCTCCATGGGGCAGCCAGCCTCAGCGAGGCCTTGTCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323662.9
CDS CCA 72 bp TGCTGGAGGTGGGCACAGCAGGGAATGCTGAGGACCTaGATTCCCCAGCCTGGACACCACCCTTGGTCACCT +
Preference number: 6 (lower is better)
Translates to: CWRWAQQGMLRT*IPQPGHHPWSP
Trigger: AGGTGACCAAGGGTGGTGTCCAGGCTGGGGAATCCAGGTCCTCAGCATTCCCTGCTGTGCCCACCTCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS CCA 72 bp AGCAGGGACAAGGCCTTCTCCACTCAGTCCAGCCAGTaGGCTCTGGTGAGGAGCAGAGGTAGGAGACCCCAG +
Preference number: 6 (lower is better)
Translates to: SRDKAFSTQSSQ*ALVRSRGRRPQ
Trigger: CTGGGGTCTCCTACCTCTGCTCCTCACCAGAGCCCACTGGCTGGACTGAGTGGAGAAGGCCTTGTCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528691.5
CDS CAA 72 bp CGAACGGTGCAGTCCAGGCTGGAGCAGGCATACAGTTaGAGCGTGGGGCAGCAGCACAGGCCAGTGATGTGG +
Preference number: 6 (lower is better)
Translates to: RTVQSRLEQAYS*SVGQQHRPVMW
Trigger: CCACATCACTGGCCTGTGCTGCTGCCCCACGCTCAAACTGTATGCCTGCTCCAGCCTGGACTGCACCGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323662.9
ENST00000533108.1
ENST00000534167.5
CDS CAA 90 bp GCAGGGAATGCTGAGGACCTGGATTCCCCAGCCTGGACACCACCCTaGGTCACCTGTATAACCTCTCAGAGCCCCTCAGCCGCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: AGNAEDLDSPAWTPP*VTCITSQSPSAASP
Trigger: TGGACTGGCGGCTGAGGGGCTCTGAGAGGTTATACAGGTGACCAAGGGTGGTGTCCAGGCTGGGGAATCCAGGTCCTCAGCATTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS TCA 72 bp AGTCCAGCTCTGCCTGCCAGGCCTCCGAGAGCTGGCTaGGCTAGCAACCCCTACTCTCAACACAGATGGCAG +
Preference number: 6 (lower is better)
Translates to: SPALPARPPRAG*ASNPYSQHRWQ
Trigger: CTGCCATCTGTGTTGAGAGTAGGGGTTGCTAGCTCAGCCAGCTCTCGGAGGCCTGGCAGGCAGAGCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS TCA 72 bp AGGTCTCGGTCCCGGGCCACTATGGCGTCCAAGTCCTaGGTCAGGGTTCAGGGATCAGCCTGCTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: RSRSRATMASKS*VRVQGSACSSL
Trigger: CAAGGAAGAGCAGGCTGATCCCTGAACCCTGACTCAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 72 bp GCCTTTGGCAGGGGAGCTACTGACCCGAAGACACAATaGTGTTCCAGGTGGATGCGATGGCGACAACCGGGC +
Preference number: 6 (lower is better)
Translates to: AFGRGATDPKTQ*CSRWMRWRQPG
Trigger: GCCCGGTTGTCGCCATCGCATCCACCTGGAACAGCATTGTGTCTTCGGGTCAGTAGCTCCCCTGCCAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS GCA 72 bp GCAGAGGCTGGGACAAGGACCAACCCCAAACGGGTGTaGCAGGGCTCAGGCAGGCTTGTATCAACTCCAGAG +
Preference number: 6 (lower is better)
Translates to: AEAGTRTNPKRV*QGSGRLVSTPE
Trigger: CTCTGGAGTTGATACAAGCCTGCCTGAGCCCTGGCACACCCGTTTGGGGTTGGTCCTTGTCCCAGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525150.5
ENST00000528691.5
ENST00000534167.5
CDS GCA 72 bp CAGGGTTCAGGGATCAGCCTGCTCTTCCTTGAGCCTTaGTATGTGCTGCCCGGGCAACCATGGGGATCCCAG +
Preference number: 6 (lower is better)
Translates to: QGSGISLLFLEP*YVLPGQPWGSQ
Trigger: CTGGGATCCCCATGGTTGCCCGGGCAGCACATAGCAAGGCTCAAGGAAGAGCAGGCTGATCCCTGAACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CCA 72 bp GCCTCAACTGCTGAAGGTCTCGGTCCCGGGCCACTATaGCGTCCAAGTCCTGAGTCAGGGTTCAGGGATCAG +
Preference number: 6 (lower is better)
Translates to: ASTAEGLGPGPL*RPSPESGFRDQ
Trigger: CTGATCCCTGAACCCTGACTCAGGACTTGGACGCCATAGTGGCCCGGGACCGAGACCTTCAGCAGTTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525150.5
ENST00000528691.5
CDS CAA 72 bp GCTGAGGACCTGGATTCCCCAGCCTGGACACCACCCTaGGTCACCTGTATAACCTCTCAGAGCCCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: AEDLDSPAWTPP*VTCITSQSPSA
Trigger: GGCTGAGGGGCTCTGAGAGGTTATACAGGTGACCAAGGGTGGTGTCCAGGCTGGGGAATCCAGGTCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS CCA 72 bp GCGTGGGAGGCTACAGCCTGGCCCTCTGGTTGTAGGTaGGCATGGCCCTTGGGTCAGATTTGGACACAAAGA +
Preference number: 6 (lower is better)
Translates to: AWEATAWPSGCR*AWPLGQIWTQR
Trigger: TCTTTGTGTCCAAATCTGACCCAAGGGCCATGCCCACCTACAACCAGAGGGCCAGGCTGTAGCCTCCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS CAA 90 bp CAGCCTCCCACACCTTCACGGTGCTGTCCCGGGAAGCTGTCACCATaGCCTCTACTTCCTCGCAGTAAGCCAGGTCCGAGATGGTGGTTT +
Preference number: 6 (lower is better)
Translates to: QPPTPSRCCPGKLSP*PLLPRSKPGPRWWF
Trigger: AAACCACCATCTCGGACCTGGCTTACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCCCGGGACAGCACCGTGAAGGTGTGGGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 90 bp TGCACGGTGGCAGGAAAGAAGCCCCTGAGGCTAGAGAGAGGTTCCTaGTCCCATCTCTTTGGCAGCAGTGGGATCTGGGATGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: CTVAGKKPLRLERGS*SHLFGSSGIWDALL
Trigger: CAGCAAGGCATCCCAGATCCCACTGCTGCCAAAGAGATGGGACAAGGAACCTCTCTCTAGCCTCAGGGGCTTCTTTCCTGCCACCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525150.5
CDS TCA 72 bp GATACCAGGGGCGAGGCCCTCAGTGAGCATCAGCTCTaGCAAACGAGAAGGGAAACCTGGAGAAGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: DTRGEALSEHQL*QTRRETWRSAG
Trigger: GCCAGCACTTCTCCAGGTTTCCCTTCTCGTTTGTCAGAGCTGATGCTCACTGAGGGCCTCGCCCCTGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS GCA 72 bp CACCTTCACGGTGCTGTCCCGGGAAGCTGTCACCATTaGCTCTACTTCCTCGCAGTAAGCCAGGTCCGAGAT +
Preference number: 6 (lower is better)
Translates to: HLHGAVPGSCHH*LYFLAVSQVRD
Trigger: ATCTCGGACCTGGCTTACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCCCGGGACAGCACCGTGAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CAA 72 bp ACACCTTCACGGTGCTGTCCCGGGAAGCTGTCACCATaGCCTCTACTTCCTCGCAGTAAGCCAGGTCCGAGA +
Preference number: 6 (lower is better)
Translates to: TPSRCCPGKLSP*PLLPRSKPGPR
Trigger: TCTCGGACCTGGCTTACTGCGAGGAAGTAGAGGCAATGGTGACAGCTTCCCGGGACAGCACCGTGAAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS TCA 72 bp AGGAGAACCCTGAGATACCAGGGGCGAGGCCCTCAGTaGGCATCAGCTCTGACAAACGAGAAGGGAAACCTG +
Preference number: 6 (lower is better)
Translates to: RRTLRYQGRGPQ*ASALTNEKGNL
Trigger: CAGGTTTCCCTTCTCGTTTGTCAGAGCTGATGCTCACTGAGGGCCTCGCCCCTGGTATCTCAGGGTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS CCA 72 bp TGCCTGATGTCAGCTCCCAGAGCAGCAAGGAGCCTGTaGCCACAAACACAGCTGTACTGGAACAGGGCTAGA +
Preference number: 6 (lower is better)
Translates to: CLMSAPRAARSL*PQTQLYWNRAR
Trigger: TCTAGCCCTGTTCCAGTACAGCTGTGTTTGTGGCCACAGGCTCCTTGCTGCTCTGGGAGCTGACATCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529209.1
CDS CAA 72 bp GCAGGAAAGAAGCCCCTGAGGCTAGAGAGAGGTTCCTaGTCCCATCTCTTTGGCAGCAGTGGGATCTGGGAT +
Preference number: 6 (lower is better)
Translates to: AGKKPLRLERGS*SHLFGSSGIWD
Trigger: ATCCCAGATCCCACTGCTGCCAAAGAGATGGGACAAGGAACCTCTCTCTAGCCTCAGGGGCTTCTTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525150.5
CDS GCA 72 bp TGCCACTGTTGGCTGCTGGTCAAAAAGGGCAGGACCTaGGACGGCTCCGTGAAAGTCAACTCATTCTTTTCG +
Preference number: 6 (lower is better)
Translates to: CHCWLLVKKGRT*DGSVKVNSFFS
Trigger: CGAAAAGAATGAGTTGACTTTCACGGAGCCGTCGCAGGTCCTGCCCTTTTTGACCAGCAGCCAACAGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323662.9
ENST00000534167.5
CDS CCA 72 bp GAGGCTACAGCCTGGCCCTCTGGTTGTAGGTGGGCATaGCCCTTGGGTCAGATTTGGACACAAAGATTTGTA +
Preference number: 6 (lower is better)
Translates to: EATAWPSGCRWA*PLGQIWTQRFV
Trigger: TACAAATCTTTGTGTCCAAATCTGACCCAAGGGCCATGCCCACCTACAACCAGAGGGCCAGGCTGTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529209.1