RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR92 (Homo sapiens)

Ensembl gene IDs: ENSG00000243667

Ensembl transcript IDs: ENST00000295121.11, ENST00000406245.6, ENST00000409164.1, ENST00000457114.5, ENST00000468984.1, ENST00000492039.6

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTaGAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGGAGGCT +
Preference number: 1 (lower is better)
Translates to: ELALEIVYLVLLIPT*SSKSANKPRERLEA
Trigger: AGCCTCCAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR TCA 90 bp CCTTTTCACAGGCCAACCCTGAGCAATGATATCAGACCTTTTAAATaGTCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGAAAGTG +
Preference number: 1 (lower is better)
Translates to: PFHRPTLSNDIRPFK*SSICDVSALGIQKV
Trigger: CACTTTCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAAAAGGTCTGATATCATTGCTCAGGGTTGGCCTGTGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
3UTR GCA 90 bp TCAGAAAGTGGTGTGCATAGTAAAAGCTTTCATTGTAACTCACCCTaGCTAGATATGCAGAAAGCAAATTCAGTGATAAGATCTTTCCTG +
Preference number: 1 (lower is better)
Translates to: SESGVHSKSFHCNSP*LDMQKANSVIRSFL
Trigger: CAGGAAAGATCTTATCACTGAATTTGCTTTCTGCATATCTAGGCAGGGTGAGTTACAATGAAAGCTTTTACTATGCACACCACTTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
3UTR-3UTR CCA 90 bp AAAGAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGAGAGGCTGGAGGCTaGCCCAGAGGCTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KELALEIVYLVLLIPTCSREAGG*PRGLWL
Trigger: CAGCCACAAGCCTCTGGGCCAGCCTCCAGCCTCTCT...GCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR-3UTR TCA 90 bp AAAGAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCATGGTCTCGATCTCCTaGCCTTCTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: KELALEIVYLVLLIPTCSMVSIS*PSDPPA
Trigger: GGCGGGTGGATCAGAAGGTCAGGAGATCGAGACCAT...GCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR-3UTR TCA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCGATCTCCTGACCTTCTaGTCCACCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVDLLTF*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCAGAAGGTCAGGAGATC...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR CAA 90 bp TCTAACCCTCGAGCTCCATTACACGGACCCAAGCCTAAGGACCTTTaGTGTACCATTTCTATGGGAAGGCGTCACAGGGTGGAGATGTTA +
Preference number: 2 (lower is better)
Translates to: SNPRAPLHGPKPKDL*CTISMGRRHRVEML
Trigger: TAACATCTCCACCCTGTGACGCCTTCCCATAGAAATGGTACACAAAAGGTCCTTAGGCTTGGGTCCGTGTAATGGAGCTCGAGGGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457114.5
3UTR-3UTR GCA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCAGGAGTGAGCCACCGTaGCCAGCCTCAAGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVRSEPP*PASSPK
Trigger: CTTTGGACTTGAGGCTGGGCACGGTGGCTCACTCCT...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR CAA 90 bp AGAAATGGAAGGGAGAGAAAAGAACTGGCCCTGGAGATAGTTTACTaGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAG +
Preference number: 2 (lower is better)
Translates to: RNGRERKELALEIVY*VLLIPTCSSKSANK
Trigger: CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTTTCTCTCCCTTCCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR CAA 90 bp CAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTaGTTCAATGAGGGTCAGAGGACTCCAGAACCTATCTTAAATTGT +
Preference number: 2 (lower is better)
Translates to: QRLVAGVFYHQPNPA*FNEGQRTPEPILNC
Trigger: ACAATTTAAGATAGGTTCTGGAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR-3UTR CCA 90 bp AAACACTTCCAGAATGAAAAACTGATGCCAGCTTCTAACCCTCGAGCTCCATTATGTGTACCATTTCTATaGGAAGGCGTCACAGGGTGG +
Preference number: 2 (lower is better)
Translates to: KHFQNEKLMPASNPRAPLCVPFL*EGVTGW
Trigger: CCACCCTGTGACGCCTTCCCATAGAAATGGTACACA...TAATGGAGCTCGAGGGTTAGAAGCTGGCATCAGTTTTTCATTCTGGAAGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457114.5
3UTR CAA 90 bp GTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCAGGCTCTGTaGGGGTCTATCACAATGATGTTATCTAAATTTAGGCAAGGAACC +
Preference number: 2 (lower is better)
Translates to: VIRSFLETNQQPQAL*GSITMMLSKFRQGT
Trigger: GGTTCCTTGCCTAAATTTAGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
3UTR-3UTR TCA 90 bp TTTTCTCCAGATATAGATTGCTGGATATCACAGGCAAACAATGTGCAAAGGCAATCCAGAATGAAAAACTaGTGCCAGCTTCTAACCCTC +
Preference number: 2 (lower is better)
Translates to: FSPDIDCWISQANNVQRQSRMKN*CQLLTL
Trigger: GAGGGTTAGAAGCTGGCATCAGTTTTTCATTCTGGA...TTGCCTTTGCACATTGTTTGCCTGTGATATCCAGCAATCTATATCTGGAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457114.5
3UTR GCA 72 bp CTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTaGAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: LEIVYLVLLIPT*SSKSANKPRER
Trigger: CCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR-3UTR CAA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCAGAACCTATCTTAAATaGTGTGAGTGTTCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLRTYLK*CECSSG
Trigger: TCCAGAGGAACACTCACACAATTTAAGATAGGTTCT...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR-3UTR CAA 90 bp AAACACTTCCAGAATGAAAAACTGATGCCAGCTTCTAACCCTCGAGCTCCATTAAAGCCTAAGGACCTTTaGTGTACCATTTCTATGGGA +
Preference number: 3 (lower is better)
Translates to: KHFQNEKLMPASNPRAPLKPKDL*CTISMG
Trigger: TCCCATAGAAATGGTACACAAAAGGTCCTTAGGCTT...TAATGGAGCTCGAGGGTTAGAAGCTGGCATCAGTTTTTCATTCTGGAAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457114.5
3UTR TCA 72 bp GGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATaGGGGTCAGAGGACTCCAGAACCTATCTTAAATTG +
Preference number: 3 (lower is better)
Translates to: GLLSSAKSSFVQ*GSEDSRTYLKL
Trigger: CAATTTAAGATAGGTTCTGGAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR GCA 72 bp ATTGCAGAAAATAGCTACCCAAATCTAGACCAACCGTaGCGTTTTGAGAGAGAGAGATATATATATATATAT +
Preference number: 3 (lower is better)
Translates to: IAENSYPNLDQP*RFERERYIYIY
Trigger: ATATATATATATATATCTCTCTCTCTCAAAACGGCACGGTTGGTCTAGATTTGGGTAGCTATTTTCTGCAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGTCATACTTCCAGAGGTaGAGGCCGCCGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLIPTCSSKSANKPRERLSYFQR*RPPAPP
Trigger: TGGAGGCGCCGGCGGCCTTCACCTCTGGAAGTATGA...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CCA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAAGCCCCGAGAGAGGCTaGAGGCTGGCCCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRSPERG*RLAQRL
Trigger: AAGCCTCTGGGCCAGCCTCCAGCCTCTCTCGGGGCT...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGATCTCCTGACCTTCTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRDLLTF*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCAGAAGGTCAGGAGATC...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGGACGCCGGTGCCCCGTaGGAAGTTGCCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALDAGAP*EVAHGH
Trigger: GTGACCATGGGCAACTTCGCACGGGGCACCGGCGTC...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGAAGAGCTCCCTGTTCTaGGGCAGGTGTCGGACCTGC +
Preference number: 4 (lower is better)
Translates to: LLIPTCSSKSANKPRERLKSSLF*GRCRTC
Trigger: GCAGGTCCGACACCTGCCGCAGAACAGGGAGCTCTT...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGCGAAGGCCGACATGGTaGAGCCAATTTCAGCTACGG +
Preference number: 4 (lower is better)
Translates to: LLIPTCSSKSANKPRERLRRPTW*SQFQLR
Trigger: CCGTAGCTGAAATTGGCTGCACCATGTCGGCCTTCG...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGATGGTCTCGATCTCCTaGCCTTCTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALMVSIS*PSDPPA
Trigger: GGCGGGTGGATCAGAAGGTCAGGAGATCGAGACCAT...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGTCACAAATTTGGCGCTaGAGGGCACCCACTTACAGT +
Preference number: 4 (lower is better)
Translates to: LLIPTCSSKSANKPRERLSQIWR*RAPTYS
Trigger: ACTGTAAGTGGGTGCCCTGCAGCGCCAAATTTGTGA...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp AAGCCTAAGGACCTTTTGTGTACCATTTCTATGGGAAGGCGTCACAGGGTGGAGAAGAGCTCCCTGTTCTaGGGCAGGTGTCGGACCTGC +
Preference number: 4 (lower is better)
Translates to: KPKDLLCTISMGRRHRVEKSSLF*GRCRTC
Trigger: GCAGGTCCGACACCTGCCGCAGAACAGGGAGCTCTT...CTCCACCCTGTGACGCCTTCCCATAGAAATGGTACACAAAAGGTCCTTAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR TCA 90 bp ATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGTCTCGTACAGCTGAATaGCGCCGGTGCCCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: IVYLVLLIPTCSSKSANKSRTAE*RRCPVR
Trigger: TCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGA...CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp TTTAGGCAAGGAACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACGACGCCGGTGCCCCGTaGGAAGTTGCCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: FRQGTLSPSFRGSECSNHDAGAP*EVAHGH
Trigger: GTGACCATGGGCAACTTCGCACGGGGCACCGGCGTC...GTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGTTCCTTGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR GCA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGACAGGATCATCTTTTTaGCTTGGGTCCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: LLIPTCSSKSANKPRERLTGSSF*LGSHTF
Trigger: GAAGGTGTGGGACCCAAGGCAAAAAGATGATCCTGT...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CCA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGGTGCGAAGTTGCCCATaGTCACAAATTTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALVRSCP*SQIWRC
Trigger: GCAGCGCCAAATTTGTGACCATGGGCAACTTCGCAC...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR CAA 72 bp CGAGCTCCATTACACGGACCCAAGCCTAAGGACCTTTaGTGTACCATTTCTATGGGAAGGCGTCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: RAPLHGPKPKDL*CTISMGRRHRV
Trigger: CACCCTGTGACGCCTTCCCATAGAAATGGTACACAAAAGGTCCTTAGGCTTGGGTCCGTGTAATGGAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR TCA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGCAAACACCGTGTAGTTaGAGCCCTTCTGGATATGGG +
Preference number: 4 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALQTPCS*SPSGYG
Trigger: CCCATATCCAGAAGGGCTTCAACTACACGGTGTTTG...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGCACCGTTTGGTCAAATaGACTACAGACGCAGAGACC +
Preference number: 4 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALHRLVK*TTDAET
Trigger: GGTCTCTGCGTCTGTAGTTCATTTGACCAAACGGTG...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp GCAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCATACTACTTCCAGAGGTaGAGGCCGCCGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AESKFSDKIFPGDQSAASYYFQR*RPPAPP
Trigger: TGGAGGCGCCGGCGGCCTTCACCTCTGGAAGTAGTA...TGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp AAAGAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCCCATGGTCACAAATTTaGCGCTGCAGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: KELALEIVYLVLLIPTCSPWSQI*RCRAPT
Trigger: AGTGGGTGCCCTGCAGCGCCAAATTTGTGACCATGG...GCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp TTTAGGCAAGGAACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTGGATCTCGTACAGCTaGATGACGCCGGTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: FRQGTLSPSFRGSECSNHWISYS*MTPVPR
Trigger: ACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCA...GTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGTTCCTTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR TCA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGCCAACCGTGCCGTTTTaGGAGAGAGAGATATATATA +
Preference number: 4 (lower is better)
Translates to: LLIPTCSSKSANKPRERLPTVPF*EREIYI
Trigger: TATATATATCTCTCTCTCTCAAAACGGCACGGTTGG...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp TTTAGGCAAGGAACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACAAGAGCTCCCTGTTCTaGGGCAGGTGTCGGACCTGC +
Preference number: 4 (lower is better)
Translates to: FRQGTLSPSFRGSECSNHKSSLF*GRCRTC
Trigger: GCAGGTCCGACACCTGCCGCAGAACAGGGAGCTCTT...GTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGTTCCTTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp ATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGAGGAGTGAGCCACCGTaGCCAGCCTCAAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: IVYLVLLIPTCSSKSANKRSEPP*PASSPK
Trigger: CTTTGGACTTGAGGCTGGGCACGGTGGCTCACTCCT...CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAAATCTAGACCAACCGTaGCGTTTTGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRNLDQP*RFERER
Trigger: TCTCTCTCTCTCAAAACGGCACGGTTGGTCTAGATT...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCATATGGGCGATGATCTaGGGCTTCTCGAAGGCCGAC +
Preference number: 4 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLIWAMI*GFSKAD
Trigger: GTCGGCCTTCGAGAAGCCTCAGATCATCGCCCATAT...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp GAGACCAATCAGCAGCCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTTCTGGATATGGGCGATaGTCTGAGGCTTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: ETNQQPQALLGSITMMLSSGYGR*SEASRR
Trigger: CCTTCGAGAAGCCTCAGATCATCGCCCATATCCAGA...AGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp TCAGACCTTTTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGATCTCGTACAGCTGAATaGCGCCGGTGCCCCGTGCGA +
Preference number: 4 (lower is better)
Translates to: SDLLNDLVSVMLAPLGFRSRTAE*RRCPVR
Trigger: TCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGA...TCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAAAAGGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR TCA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCTGGATCTCGTACAGCTaGATGACGCCGGTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVWISYS*MTPVPR
Trigger: ACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCA...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp AAAGAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCCAGTTCCATCTCGGCTaGCAGTCACAATTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KELALEIVYLVLLIPTCSQFHLG*QSQFQV
Trigger: CACCTGAAATTGTGACTGGCAGCCGAGATGGAACTG...GCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGCTTGATTATAAGCATTaGCAAATGCCACAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLIPTCSSKSANKPRERLLDYKH*QMPQSN
Trigger: GTTGGACTGTGGCATTTGGCAATGCTTATAATCAAG...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGAAGGCTTACAGAACCTaGGACTCCCATTTCTATTCC +
Preference number: 4 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALKAYRT*DSHFYS
Trigger: GGAATAGAAATGGGAGTCGCAGGTTCTGTAAGCCTT...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGACAACGTAACATTCTaGAGAAGGCTTACAGAACCT +
Preference number: 4 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRDNVTF*RRLTEP
Trigger: AGGTTCTGTAAGCCTTCTGCAGAATGTTACGTTGTC...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
3UTR CAA 72 bp AGGGAGAGAAAAGAACTGGCCCTGGAGATAGTTTACTaGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RERKELALEIVY*VLLIPTCSSKS
Trigger: TGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTTTCTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCTCTGGATATGGGCGATaGTCTGAGGCTTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLSGYGR*SEASRR
Trigger: CCTTCGAGAAGCCTCAGATCATCGCCCATATCCAGA...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGACACACAGTAGATTTATaGGCCTTTTCTGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRHTVDL*AFSETE
Trigger: CTCTGTTTCAGAAAAGGCTCATAAATCTACTGTGTG...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp AAAGAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCACTCCAATCCAAACTTaGAATGGGCTGGGTGGACAA +
Preference number: 4 (lower is better)
Translates to: KELALEIVYLVLLIPTCSTPIQT*NGLGGQ
Trigger: TTGTCCACCCAGCCCATTTCAAGTTTGGATTGGAGT...GCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp CTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATCTTACTACTTCCAGAGGTaGAGGCCGCCGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSPSFRGSECSNHFKIVSYYFQR*RPPAPP
Trigger: TGGAGGCGCCGGCGGCCTTCACCTCTGGAAGTAGTA...AGATACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp GCAATGGCTGTAAGTAACATTTGCAGAACTTCATCTAAACACTTCCAGAATGAAGACTACTTCCAGAGGTaGAGGCCGCCGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AMAVSNICRTSSKHFQNEDYFQR*RPPAPP
Trigger: TGGAGGCGCCGGCGGCCTTCACCTCTGGAAGTAGTC...TTCATTCTGGAAGTGTTTAGATGAAGTTCTGCAAATGTTACTTACAGCCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR GCA 90 bp GCAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCACGAAGGCCGACATGGTaGAGCCAATTTCAGCTACGG +
Preference number: 4 (lower is better)
Translates to: AESKFSDKIFPGDQSAASRRPTW*SQFQLR
Trigger: CCGTAGCTGAAATTGGCTGCACCATGTCGGCCTTCG...TGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCTGCCCCGTGCGAAGTTaGCCATGGTCACAAATTTGG +
Preference number: 4 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLCPVRS*PWSQIW
Trigger: CCAAATTTGTGACCATGGGCAACTTCGCACGGGGCA...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp ACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTAAAGAGCTCCCTGTTCTaGGGCAGGTGTCGGACCTGC +
Preference number: 4 (lower is better)
Translates to: TLSPSFRGSECSNHFKIVKSSLF*GRCRTC
Trigger: GCAGGTCCGACACCTGCCGCAGAACAGGGAGCTCTT...TACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp AAACTGATGCCAGCTTCTAACCCTCGAGCTCCATTACACGGACCCAAGCCTAAGCACAGGCAAACAATGTaGAAAGGCAATGGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: KLMPASNPRAPLHGPKPKHRQTM*KGNGCK
Trigger: CTTACAGCCATTGCCTTTGCACATTGTTTGCCTGTG...CTTAGGCTTGGGTCCGTGTAATGGAGCTCGAGGGTTAGAAGCTGGCATCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR CCA 90 bp TGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGCATAGTAAAAGCTTTCCCATGGTCACAAATTTaGCGCTGCAGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: CDVSALGIQKVVCIVKAFPWSQI*RCRAPT
Trigger: AGTGGGTGCCCTGCAGCGCCAAATTTGTGACCATGG...GAAAGCTTTTACTATGCACACCACTTTCTGAATCCCAAGGGCGCTAACATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR CCA 90 bp GGACCCAAGCCTAAGGACCTTTTGTGTACCATTTCTATGGGAAGGCGTCACAGGCAGAGGCAAAACCTTTaGTTGGATGCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GPKPKDLLCTISMGRRHRQRQNL*LDAVFS
Trigger: TGAGAACACAGCATCCAACCAAAGGTTTTGCCTCTG...CCTGTGACGCCTTCCCATAGAAATGGTACACAAAAGGTCCTTAGGCTTGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457114.5
3UTR CAA 72 bp GTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTaGTTCAATGAGGGTCAGAGGACTCCAGAACCTATC +
Preference number: 4 (lower is better)
Translates to: VAGVFYHQPNPA*FNEGQRTPEPI
Trigger: GATAGGTTCTGGAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCTTTACTTGGTGCTTCTaGTACCCACGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLFTWCF*YPRAAA
Trigger: TGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAA...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp AGCCTAAGGACCTTTTGTGTACCATTTCTATGGGAAGGCGTCACAGGGTGGAGATCCAGAATGAAAAACTaGTGCCAGCTTCTAACCCTC +
Preference number: 4 (lower is better)
Translates to: SLRTFCVPFLWEGVTGWRSRMKN*CQLLTL
Trigger: GAGGGTTAGAAGCTGGCATCAGTTTTTCATTCTGGA...TCTCCACCCTGTGACGCCTTCCCATAGAAATGGTACACAAAAGGTCCTTAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR GCA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGTAGCTAAATATCTCTaGTGTAAAGATGTTGCACCA +
Preference number: 4 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRVAKYL*CKDVAP
Trigger: TGGTGCAACATCTTTACAGCAGAGATATTTAGCTAC...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp ATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCTTCTGATACCCACGTaGAGCAGCAAGTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: IVYLVLLIPTCSSKSANKLLIPT*SSKSAN
Trigger: GTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG...CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CCA 90 bp AGCCTAAGGACCTTTTGTGTACCATTTCTATGGGAAGGCGTCACAGGGTGGAGAGGCAAAACCTTTGGTTaGATGCTGTGTTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: SLRTFCVPFLWEGVTGWRGKTFG*MLCSHV
Trigger: GACATGAGAACACAGCATCCAACCAAAGGTTTTGCC...TCTCCACCCTGTGACGCCTTCCCATAGAAATGGTACACAAAAGGTCCTTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR GCA 90 bp GTTCAATCTAATCCTACTTTACACCCACAGGTAACTTTAAAAGGAGCAGTGTGCCGAAGGCCGACATGGTaGAGCCAATTTCAGCTACGG +
Preference number: 4 (lower is better)
Translates to: VQSNPTLHPQVTLKGAVCRRPTW*SQFQLR
Trigger: CCGTAGCTGAAATTGGCTGCACCATGTCGGCCTTCG...GCACACTGCTCCTTTTAAAGTTACCTGTGGGTGTAAAGTAGGATTAGATTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp TGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGCATAGTAAAAGCTTTCTCACAAATTTGGCGCTaGAGGGCACCCACTTACAGT +
Preference number: 4 (lower is better)
Translates to: CDVSALGIQKVVCIVKAFSQIWR*RAPTYS
Trigger: ACTGTAAGTGGGTGCCCTGCAGCGCCAAATTTGTGA...GAAAGCTTTTACTATGCACACCACTTTCTGAATCCCAAGGGCGCTAACATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR GCA 90 bp TGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGCATAGTAAAAGCTTTCCAGTTCCATCTCGGCTaGCAGTCACAATTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CDVSALGIQKVVCIVKAFQFHLG*QSQFQV
Trigger: CACCTGAAATTGTGACTGGCAGCCGAGATGGAACTG...GAAAGCTTTTACTATGCACACCACTTTCTGAATCCCAAGGGCGCTAACATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp TTTAGGCAAGGAACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACCAGTTCCATCTCGGCTaGCAGTCACAATTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: FRQGTLSPSFRGSECSNHQFHLG*QSQFQV
Trigger: CACCTGAAATTGTGACTGGCAGCCGAGATGGAACTG...GTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGTTCCTTGCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp AAAGAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCATAAGCATTGCCAAATaGCACAGTCCAACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KELALEIVYLVLLIPTCSISIAK*HSPTVS
Trigger: AGAGACTGTTGGACTGTGGCATTTGGCAATGCTTAT...GCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGAAACCTTTGGTTGGATaGTGTGTTCTCATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALKPLVG*CVLMSK
Trigger: TTTTGACATGAGAACACAGCATCCAACCAAAGGTTT...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp TTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTTCTGGATATGGGCGATaGTCTGAGGCTTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LNDLVSVMLAPLGFRKWCSGYGR*SEASRR
Trigger: CCTTCGAGAAGCCTCAGATCATCGCCCATATCCAGA...ACACCACTTTCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp ATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGTACACACCCCATTTTTaGTGTTTGTCTCCCACCGTA +
Preference number: 4 (lower is better)
Translates to: IVYLVLLIPTCSSKSANKYTPHF*CLSPTV
Trigger: TACGGTGGGAGACAAACATCAAAAATGGGGTGTGTA...CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp TGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGCATAGTAAAAGCTTTCACAGGATCATCTTTTTaGCTTGGGTCCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: CDVSALGIQKVVCIVKAFTGSSF*LGSHTF
Trigger: GAAGGTGTGGGACCCAAGGCAAAAAGATGATCCTGT...GAAAGCTTTTACTATGCACACCACTTTCTGAATCCCAAGGGCGCTAACATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp GAGACCAATCAGCAGCCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTCATTGTAACTCACCCTaGCTAGATATGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: ETNQQPQALLGSITMMLSHCNSP*LDMQKA
Trigger: TGCTTTCTGCATATCTAGGCAGGGTGAGTTACAATG...AGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp ATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCAAAAACGGCAACCTaGAAACCAGACTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: IVYLVLLIPTCSSKSANKPKTAT*KPDSKH
Trigger: ATGTTTGGAGTCTGGTTTCCAGGTTGCCGTTTTTGG...CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CCA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCTCTCGAAGGCCGACATaGTGCAGCCAATTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVSRRPT*CSQFQL
Trigger: TAGCTGAAATTGGCTGCACCATGTCGGCCTTCGAGA...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CCA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCATCATCTTTTTGCCTTaGGTCCCACACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLIIFLP*VPHLHS
Trigger: ACTGTGAAGGTGTGGGACCCAAGGCAAAAAGATGAT...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CCA 90 bp TGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGCAAAACCTTTGGTTaGATGCTGTGTTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: WLGSFIISQIQLCSMRVRGKTFG*MLCSHV
Trigger: GACATGAGAACACAGCATCCAACCAAAGGTTTTGCC...TCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTATATGGGCGATGATCTaGGGCTTCTCGAAGGCCGAC +
Preference number: 4 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTIWAMI*GFSKAD
Trigger: GTCGGCCTTCGAGAAGCCTCAGATCATCGCCCATAT...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp AATCAGCAGCCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTAAATTTCAAACACCGTGTAGTTaGAGCCCTTCTGGATATGGG +
Preference number: 4 (lower is better)
Translates to: NQQPQALLGSITMMLSKFQTPCS*SPSGYG
Trigger: CCCATATCCAGAAGGGCTTCAACTACACGGTGTTTG...AAATTTAGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp CAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCAGTACACACCCCATTTTTaGTGTTTGTCTCCCACCGTA +
Preference number: 4 (lower is better)
Translates to: QKANSVIRSFLETNQQPQYTPHF*CLSPTV
Trigger: TACGGTGGGAGACAAACATCAAAAATGGGGTGTGTA...CTGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp ATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCTCAGAATCTTTCTTTaGCCGCTGAATAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: IVYLVLLIPTCSSKSANKLRIFL*PLNRVF
Trigger: GAATACCCTATTCAGCGGTCAAAGAAAGATTCTGAG...CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR GCA 90 bp CTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATCTTGCCCCGTGCGAAGTTaGCCATGGTCACAAATTTGG +
Preference number: 4 (lower is better)
Translates to: LSPSFRGSECSNHFKIVSCPVRS*PWSQIW
Trigger: CCAAATTTGTGACCATGGGCAACTTCGCACGGGGCA...AGATACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR GCA 90 bp AATGAAAAACTGATGCCAGCTTCTAACCCTCGAGCTCCATTACACGGACCCAAGTCTCCAGATATAGATTaGTGGATATCACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: NEKLMPASNPRAPLHGPKSPDID*WISQAN
Trigger: GTTTGCCTGTGATATCCAGCAATCTATATCTGGAGA...CTTGGGTCCGTGTAATGGAGCTCGAGGGTTAGAAGCTGGCATCAGTTTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR CCA 90 bp TCAGAAAGTGGTGTGCATAGTAAAAGCTTTCATTGTAACTCACCCTGCCTAGATTCTCGAAGGCCGACATaGTGCAGCCAATTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SESGVHSKSFHCNSPCLDSRRPT*CSQFQL
Trigger: TAGCTGAAATTGGCTGCACCATGTCGGCCTTCGAGA...ATCTAGGCAGGGTGAGTTACAATGAAAGCTTTTACTATGCACACCACTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCAGTACTCTCACCGTTTaGTCAAATGAACTACAGACG +
Preference number: 4 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLSTLTV*SNELQT
Trigger: CGTCTGTAGTTCATTTGACCAAACGGTGAGAGTACT...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CCA 90 bp GTTCAATCTAATCCTACTTTACACCCACAGGTAACTTTAAAAGGAGCAGTGTGCAGGAGCAGTGTGCACTaGCAGACTTACTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VQSNPTLHPQVTLKGAVCRSSVH*QTYYFQ
Trigger: CTGGAAGTAGTAAGTCTGCCAGTGCACACTGCTCCT...GCACACTGCTCCTTTTAAAGTTACCTGTGGGTGTAAAGTAGGATTAGATTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp TCAGACCTTTTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGAAGGAGCAGTGTGCACTaGCAGACTTACTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SDLLNDLVSVMLAPLGFRRSSVH*QTYYFQ
Trigger: CTGGAAGTAGTAAGTCTGCCAGTGCACACTGCTCCT...TCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAAAAGGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp ACCCTCGAGCTCCATTACACGGACCCAAGCCTAAGGACCTTTTGTGTACCATTTCCAGATATAGATTGCTaGATATCACAGGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: TLELHYTDPSLRTFCVPFPDIDC*ISQANN
Trigger: ATTGTTTGCCTGTGATATCCAGCAATCTATATCTGG...AAATGGTACACAAAAGGTCCTTAGGCTTGGGTCCGTGTAATGGAGCTCGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR TCA 90 bp TCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATCAAACACCGTGTAGTTaGAGCCCTTCTGGATATGGG +
Preference number: 4 (lower is better)
Translates to: SPSFRGSECSNHFKIVSDQTPCS*SPSGYG
Trigger: CCCATATCCAGAAGGGCTTCAACTACACGGTGTTTG...ATCAGATACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp ATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGTCTTTCTTTGACCGCTaGATAGGGTATTCATACTTC +
Preference number: 4 (lower is better)
Translates to: IVYLVLLIPTCSSKSANKSFFDR*IGYSYF
Trigger: GAAGTATGAATACCCTATTCAGCGGTCAAAGAAAGA...CTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp ACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATTCACAGGCCAACCCTaGGCAATGATATCAGACCTT +
Preference number: 4 (lower is better)
Translates to: TLSPSFRGSECSNHFKIVFTGQP*AMISDL
Trigger: AAGGTCTGATATCATTGCTCAGGGTTGGCCTGTGAA...TACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp GAGACCAATCAGCAGCCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTGTAGCTAAATATCTCTaGTGTAAAGATGTTGCACCA +
Preference number: 4 (lower is better)
Translates to: ETNQQPQALLGSITMMLSVAKYL*CKDVAP
Trigger: TGGTGCAACATCTTTACAGCAGAGATATTTAGCTAC...AGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATTGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp ATCTGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGCATAGTAAAAGCTTTAAAAGGAGCAGTGTaGACTGGCAGACTTACTACT +
Preference number: 4 (lower is better)
Translates to: ICDVSALGIQKVVCIVKALKGAV*TGRLTT
Trigger: AGTAGTAAGTCTGCCAGTGCACACTGCTCCTTTTAA...AGCTTTTACTATGCACACCACTTTCTGAATCCCAAGGGCGCTAACATCACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTGTGCGAAGTTGCCCATaGTCACAAATTTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTVRSCP*SQIWRC
Trigger: GCAGCGCCAAATTTGTGACCATGGGCAACTTCGCAC...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR CCA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCCAGAGGCAAAACCTTTaGTTGGATGCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVQRQNL*LDAVFS
Trigger: TGAGAACACAGCATCCAACCAAAGGTTTTGCCTCTG...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR TCA 90 bp GCAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCACACACAGTAGATTTATaGGCCTTTTCTGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: AESKFSDKIFPGDQSAASHTVDL*AFSETE
Trigger: CTCTGTTTCAGAAAAGGCTCATAAATCTACTGTGTG...TGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp TCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATTTCACAGGCCAACCCTaGGCAATGATATCAGACCTT +
Preference number: 4 (lower is better)
Translates to: SPSFRGSECSNHFKIVSDFTGQP*AMISDL
Trigger: AAGGTCTGATATCATTGCTCAGGGTTGGCCTGTGAA...ATCAGATACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp CTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATCTACAGGATCATCTTTTTaGCTTGGGTCCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: LSPSFRGSECSNHFKIVSTGSSF*LGSHTF
Trigger: GAAGGTGTGGGACCCAAGGCAAAAAGATGATCCTGT...AGATACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp CAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCAGCTTGATTATAAGCATTaGCAAATGCCACAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: QKANSVIRSFLETNQQPQLDYKH*QMPQSN
Trigger: GTTGGACTGTGGCATTTGGCAATGCTTATAATCAAG...CTGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp AATCAGCAGCCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTAAATTTATCATCTTTTTGCCTTaGGTCCCACACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: NQQPQALLGSITMMLSKFIIFLP*VPHLHS
Trigger: ACTGTGAAGGTGTGGGACCCAAGGCAAAAAGATGAT...AAATTTAGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp TTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTATCATCTTTTTGCCTTaGGTCCCACACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LNDLVSVMLAPLGFRKWCIIFLP*VPHLHS
Trigger: ACTGTGAAGGTGTGGGACCCAAGGCAAAAAGATGAT...ACACCACTTTCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp ACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTAGGCAAAACCTTTGGTTaGATGCTGTGTTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: TLSPSFRGSECSNHFKIVGKTFG*MLCSHV
Trigger: GACATGAGAACACAGCATCCAACCAAAGGTTTTGCC...TACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp GGGTCTATCACAATGATGTTATCTAAATTTAGGCAAGGAACCCTTTCCCCATCTGGCAAAACCTTTGGTTaGATGCTGTGTTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: GSITMMLSKFRQGTLSPSGKTFG*MLCSHV
Trigger: GACATGAGAACACAGCATCCAACCAAAGGTTTTGCC...AGATGGGGAAAGGGTTCCTTGCCTAAATTTAGATAACATCATTGTGATAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CCA 90 bp GGGTCTATCACAATGATGTTATCTAAATTTAGGCAAGGAACCCTTTCCCCATCTCAGAGGCAAAACCTTTaGTTGGATGCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GSITMMLSKFRQGTLSPSQRQNL*LDAVFS
Trigger: TGAGAACACAGCATCCAACCAAAGGTTTTGCCTCTG...AGATGGGGAAAGGGTTCCTTGCCTAAATTTAGATAACATCATTGTGATAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp TCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATTACACACCCCATTTTTaGTGTTTGTCTCCCACCGTA +
Preference number: 4 (lower is better)
Translates to: SPSFRGSECSNHFKIVSDYTPHF*CLSPTV
Trigger: TACGGTGGGAGACAAACATCAAAAATGGGGTGTGTA...ATCAGATACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp GTTCAATCTAATCCTACTTTACACCCACAGGTAACTTTAAAAGGAGCAGTGTGCATAAGCATTGCCAAATaGCACAGTCCAACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VQSNPTLHPQVTLKGAVCISIAK*HSPTVS
Trigger: AGAGACTGTTGGACTGTGGCATTTGGCAATGCTTAT...GCACACTGCTCCTTTTAAAGTTACCTGTGGGTGTAAAGTAGGATTAGATTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp ACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTAATAAGCATTGCCAAATaGCACAGTCCAACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TLSPSFRGSECSNHFKIVISIAK*HSPTVS
Trigger: AGAGACTGTTGGACTGTGGCATTTGGCAATGCTTAT...TACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp TCAGACCTTTTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGATTAAAAGGAGCAGTGTaGACTGGCAGACTTACTACT +
Preference number: 4 (lower is better)
Translates to: SDLLNDLVSVMLAPLGFRLKGAV*TGRLTT
Trigger: AGTAGTAAGTCTGCCAGTGCACACTGCTCCTTTTAA...TCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAAAAGGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp AATCAGCAGCCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTAAATTTCATTGTAACTCACCCTaGCTAGATATGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: NQQPQALLGSITMMLSKFHCNSP*LDMQKA
Trigger: TGCTTTCTGCATATCTAGGCAGGGTGAGTTACAATG...AAATTTAGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp AAGGCAATGGCTGTAAGTAACATTTGCAGAACTTCATCTAAACACTTCCAGAATTACACACCCCATTTTTaGTGTTTGTCTCCCACCGTA +
Preference number: 4 (lower is better)
Translates to: KAMAVSNICRTSSKHFQNYTPHF*CLSPTV
Trigger: TACGGTGGGAGACAAACATCAAAAATGGGGTGTGTA...ATTCTGGAAGTGTTTAGATGAAGTTCTGCAAATGTTACTTACAGCCATTGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR CCA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTCAGAGGCAAAACCTTTaGTTGGATGCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTQRQNL*LDAVFS
Trigger: TGAGAACACAGCATCCAACCAAAGGTTTTGCCTCTG...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp TGTGCAAAGGCAATGGCTGTAAGTAACATTTGCAGAACTTCATCTAAACACTTCCACACAGTAGATTTATaGGCCTTTTCTGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: CAKAMAVSNICRTSSKHFHTVDL*AFSETE
Trigger: CTCTGTTTCAGAAAAGGCTCATAAATCTACTGTGTG...GAAGTGTTTAGATGAAGTTCTGCAAATGTTACTTACAGCCATTGCCTTTGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR GCA 90 bp GGGTCTATCACAATGATGTTATCTAAATTTAGGCAAGGAACCCTTTCCCCATCTAAACCTTTGGTTGGATaGTGTGTTCTCATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: GSITMMLSKFRQGTLSPSKPLVG*CVLMSK
Trigger: TTTTGACATGAGAACACAGCATCCAACCAAAGGTTT...AGATGGGGAAAGGGTTCCTTGCCTAAATTTAGATAACATCATTGTGATAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp TCAGAAAGTGGTGTGCATAGTAAAAGCTTTCATTGTAACTCACCCTGCCTAGATAAACCTTTGGTTGGATaGTGTGTTCTCATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SESGVHSKSFHCNSPCLDKPLVG*CVLMSK
Trigger: TTTTGACATGAGAACACAGCATCCAACCAAAGGTTT...ATCTAGGCAGGGTGAGTTACAATGAAAGCTTTTACTATGCACACCACTTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR TCA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTCACACAGTAGATTTATaGGCCTTTTCTGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTHTVDL*AFSETE
Trigger: CTCTGTTTCAGAAAAGGCTCATAAATCTACTGTGTG...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTCTTGATTATAAGCATTaGCAAATGCCACAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTLDYKH*QMPQSN
Trigger: GTTGGACTGTGGCATTTGGCAATGCTTATAATCAAG...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR GCA 90 bp TTTTCTCCAGATATAGATTGCTGGATATCACAGGCAAACAATGTGCAAAGGCAAAAACCTTTGGTTGGATaGTGTGTTCTCATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: FSPDIDCWISQANNVQRQKPLVG*CVLMSK
Trigger: TTTTGACATGAGAACACAGCATCCAACCAAAGGTTT...TTGCCTTTGCACATTGTTTGCCTGTGATATCCAGCAATCTATATCTGGAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR GCA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTGTAGCTAAATATCTCTaGTGTAAAGATGTTGCACCA +
Preference number: 4 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTVAKYL*CKDVAP
Trigger: TGGTGCAACATCTTTACAGCAGAGATATTTAGCTAC...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS GCA 90 bp CTTCCAACCACACTGCAGGCATCCTGGTGCCCGCTTTGGCTGGACTaGACTGGGGGTGGCAGGACGGTTGGGCGCGGAGGAACTACCCCG +
Preference number: 5 (lower is better)
Translates to: LPTTLQASWCPLWLD*TGGGRTVGRGGTTP
Trigger: CGGGGTAGTTCCTCCGCGCCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 90 bp AACCACACTGCAGGCATCCTGGTGCCCGCTTTGGCTGGACTGCACTaGGGGTGGCAGGACGGTTGGGCGCGGAGGAACTACCCCGCGGAT +
Preference number: 5 (lower is better)
Translates to: NHTAGILVPALAGLH*GWQDGWARRNYPAD
Trigger: ATCCGCGGGGTAGTTCCTCCGCGCCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 90 bp AGGTTGCCTCTTCCAACCACACTGCAGGCATCCTGGTGCCCGCTTTaGCTGGACTGCACTGGGGGTGGCAGGACGGTTGGGCGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: RLPLPTTLQASWCPL*LDCTGGGRTVGRGG
Trigger: TCCTCCGCGCCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGAGGCAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 90 bp GTCGGCGGTCAGCTTCTCTGGTCTCGCGCGGCTCAAGCCATGCTTTaGGGGACGCTGGGCGAAGGCTCTGGCAAAGAGGAATGCAGACCC +
Preference number: 5 (lower is better)
Translates to: VGGQLLWSRAAQAML*GTLGEGSGKEECRP
Trigger: GGGTCTGCATTCCTCTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTGACCGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 90 bp TGCCTCTTCCAACCACACTGCAGGCATCCTGGTGCCCGCTTTGGCTaGACTGCACTGGGGGTGGCAGGACGGTTGGGCGCGGAGGAACTA +
Preference number: 5 (lower is better)
Translates to: CLFQPHCRHPGARFG*TALGVAGRLGAEEL
Trigger: TAGTTCCTCCGCGCCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 90 bp CCTCAGTCGGCGGTCAGCTTCTCTGGTCTCGCGCGGCTCAAGCCATaGTTTGGGGGACGCTGGGCGAAGGCTCTGGCAAAGAGGAATGCA +
Preference number: 5 (lower is better)
Translates to: PQSAVSFSGLARLKP*FGGRWAKALAKRNA
Trigger: TGCATTCCTCTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTGACCGCCGACTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 90 bp AGCTTCTCTGGTCTCGCGCGGCTCAAGCCATGCTTTGGGGGACGCTaGGCGAAGGCTCTGGCAAAGAGGAATGCAGACCCCAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: SFSGLARLKPCFGGR*AKALAKRNADPRIR
Trigger: GCGGATCCTGGGGTCTGCATTCCTCTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 90 bp GTCCCCGTGCTGGATCTCGTACAGCTGAATGACGCCGGTGCCCCGTaGGAAGTTGCCCATGGTCACAAATTTGGCGCTGCAGGGCACCCA +
Preference number: 5 (lower is better)
Translates to: VPVLDLVQLNDAGAP*EVAHGHKFGAAGHP
Trigger: TGGGTGCCCTGCAGCGCCAAATTTGTGACCATGGGCAACTTCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCAGCACGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS GCA 90 bp GAATGTGTTAGGTTGCCTCTTCCAACCACACTGCAGGCATCCTGGTaGCCGCTTTGGCTGGACTGCACTGGGGGTGGCAGGACGGTTGGG +
Preference number: 5 (lower is better)
Translates to: ECVRLPLPTTLQASW*PLWLDCTGGGRTVG
Trigger: CCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGAGGCAACCTAACACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS TCA 90 bp CCCGAAGCAGCTTCAGGTCCCCGTGCTGGATCTCGTACAGCTGAATaGCGCCGGTGCCCCGTGCGAAGTTGCCCATGGTCACAAATTTGG +
Preference number: 5 (lower is better)
Translates to: PEAASGPRAGSRTAE*RRCPVRSCPWSQIW
Trigger: CCAAATTTGTGACCATGGGCAACTTCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCAGCACGGGGACCTGAAGCTGCTTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS TCA 90 bp ACCTCCCGAAGCAGCTTCAGGTCCCCGTGCTGGATCTCGTACAGCTaGATGACGCCGGTGCCCCGTGCGAAGTTGCCCATGGTCACAAAT +
Preference number: 5 (lower is better)
Translates to: TSRSSFRSPCWISYS*MTPVPRAKLPMVTN
Trigger: ATTTGTGACCATGGGCAACTTCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCAGCACGGGGACCTGAAGCTGCTTCGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 90 bp GTCGAATGTGTTAGGTTGCCTCTTCCAACCACACTGCAGGCATCCTaGTGCCCGCTTTGGCTGGACTGCACTGGGGGTGGCAGGACGGTT +
Preference number: 5 (lower is better)
Translates to: VECVRLPLPTTLQAS*CPLWLDCTGGGRTV
Trigger: AACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGAGGCAACCTAACACATTCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS TCA 90 bp ATCTCCCGAAGCAGCTTCAGGTCCCCGTGCTGGATCTCGTACAGCTaGATGACGCCGGTGCCCCGTGCGAAGTTGCCCATGGTCACAAAT +
Preference number: 5 (lower is better)
Translates to: ISRSSFRSPCWISYS*MTPVPRAKLPMVTN
Trigger: ATTTGTGACCATGGGCAACTTCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCAGCACGGGGACCTGAAGCTGCTTCGGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000409164.1
CDS CCA 90 bp CAGCTACGGCAACCGCCACACCCAGAGCCCCCAAAAACGGCAACCTaGAAACCAGACTCCAAACATTGGCAATTTGTCCCTCCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: QLRQPPHPEPPKTAT*KPDSKHWQFVPPAF
Trigger: GAAAGCGGGAGGGACAAATTGCCAATGTTTGGAGTCTGGTTTCCAGGTTGCCGTTTTTGGGGGCTCTGGGTGTGGCGGTTGCCGTAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS TCA 90 bp TTTAAAAGGAGCAGTGTGCACTGGCAGACTTACTACTTCCAGAGGTaGAGGCCGCCGGCGCCTCCAGCTGTCAGAAAGAGCTCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: FKRSSVHWQTYYFQR*RPPAPPAVRKSSLF
Trigger: GAACAGGGAGCTCTTTCTGACAGCTGGAGGCGCCGGCGGCCTTCACCTCTGGAAGTAGTAAGTCTGCCAGTGCACACTGCTCCTTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS CCA 90 bp AAGGTTTTAAATAGGAAACATTCCTCAGTCGGCGGTCAGCTTCTCTaGTCTCGCGCGGCTCAAGCCATGCTTTGGGGGACGCTGGGCGAA +
Preference number: 5 (lower is better)
Translates to: KVLNRKHSSVGGQLL*SRAAQAMLWGTLGE
Trigger: TTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTGACCGCCGACTGAGGAATGTTTCCTATTTAAAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS-3UTR CAA 90 bp TGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGACCCATGGTCACAAATTaGGCGCTGCAGGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: WLGSFIISQIQLCSMRVRPMVTN*ALQGTH
Trigger: GTGGGTGCCCTGCAGCGCCAAATTTGTGACCATGGG...TCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGACTACACACCCCATTTTaGATGTTTGTCTCCCACCGT +
Preference number: 5 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRLHTPF*MFVSHR
Trigger: ACGGTGGGAGACAAACATCAAAAATGGGGTGTGTAG...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGACTGGAGATAGTTTACTaGGTGCTTCTGATACCCACG +
Preference number: 5 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRLEIVY*VLLIPT
Trigger: CGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAG...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS TCA 90 bp GGCCTTTTCAATCATTCACATCCCTGGGAATACCAGGCACTCAGCTaGTGCCTGTCGAATGTGTTAGGTTGCCTCTTCCAACCACACTGC +
Preference number: 5 (lower is better)
Translates to: GLFNHSHPWEYQALS*CLSNVLGCLFQPHC
Trigger: GCAGTGTGGTTGGAAGAGGCAACCTAACACATTCGACAGGCATCAGCTGAGTGCCTGGTATTCCCAGGGATGTGAATGATTGAAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 90 bp TCTAATCCTACTTTACACCCACAGGTAACTTTAAAAGGAGCAGTGTaGACTGGCAGACTTACTACTTCCAGAGGTGAAGGCCGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: SNPTLHPQVTLKGAV*TGRLTTSRGEGRRR
Trigger: GCGCCGGCGGCCTTCACCTCTGGAAGTAGTAAGTCTGCCAGTGCACACTGCTCCTTTTAAAGTTACCTGTGGGTGTAAAGTAGGATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp CTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGAGAGGCTGCCACATTTAATAGGTTaGGCCTTTTCAATCTCCCGA +
Preference number: 5 (lower is better)
Translates to: LLIPTCSSKSANKPRERLPHLIG*AFSISR
Trigger: TCGGGAGATTGAAAAGGCCAAACCTATTAAATGTGG...CAGCCTCTCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp CTGATGCCAGCTTCTAACCCTCGAGCTCCATTACACGGACCCAAGCCTAAGGACAGGCAAAACCTTTGGTaGGATGCTGTGTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: LMPASNPRAPLHGPKPKDRQNLW*DAVFSC
Trigger: ACATGAGAACACAGCATCCAACCAAAGGTTTTGCCT...GTCCTTAGGCTTGGGTCCGTGTAATGGAGCTCGAGGGTTAGAAGCTGGCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR CAA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCGTGCCCCGTGCGAAGTaGCCCATGGTCACAAATTTG +
Preference number: 5 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLVPRAK*PMVTNL
Trigger: CAAATTTGTGACCATGGGCAACTTCGCACGGGGCAC...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGGTCCAACAGTCTCTCTaGTTTTCTCCTTGTACAGGT +
Preference number: 5 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALVQQSL*FSPCTG
Trigger: ACCTGTACAAGGAGAAAACAAGAGAGACTGTTGGAC...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp CTGGCCCAGAGGCTTGTGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGAGGCAAAACCTTTGGTaGGATGCTGTGTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: LAQRLVAGVFYHQPNPALRQNLW*DAVFSC
Trigger: ACATGAGAACACAGCATCCAACCAAAGGTTTTGCCT...CAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCACAAGCCTCTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCGGCTGGCCCAGAGGCTaGTGGCTGGGGTCTTTTATC +
Preference number: 5 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVGWPRG*WLGSFI
Trigger: GATAAAAGACCCCAGCCACAAGCCTCTGGGCCAGCC...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS CCA 90 bp CAGAGACCCCTTTTATCTGGACTCCAATCCAAACTTGAAATGGGCTaGGTGGACAACGTAACATTCTGCAGAAGGCTTACAGAACCTGCG +
Preference number: 5 (lower is better)
Translates to: QRPLLSGLQSKLEMG*VDNVTFCRRLTEPA
Trigger: CGCAGGTTCTGTAAGCCTTCTGCAGAATGTTACGTTGTCCACCCAGCCCATTTCAAGTTTGGATTGGAGTCCAGATAAAAGGGGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000492039.6
CDS-3UTR CAA 90 bp TCAGACCTTTTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGACCCATGGTCACAAATTaGGCGCTGCAGGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: SDLLNDLVSVMLAPLGFRPMVTN*ALQGTH
Trigger: GTGGGTGCCCTGCAGCGCCAAATTTGTGACCATGGG...TCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAAAAGGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR CAA 90 bp TGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGCATAGTAAAAGCTTTCGTGCCCCGTGCGAAGTaGCCCATGGTCACAAATTTG +
Preference number: 5 (lower is better)
Translates to: CDVSALGIQKVVCIVKAFVPRAK*PMVTNL
Trigger: CAAATTTGTGACCATGGGCAACTTCGCACGGGGCAC...GAAAGCTTTTACTATGCACACCACTTTCTGAATCCCAAGGGCGCTAACATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409164.1
CDS-3UTR CAA 90 bp CTTGGTGCTTCTGATACCCACGTGCAGCAGCAAGTCAGCAAACAAGCCCCGAGATCTCTTGTTTTCTCCTaGTACAGGTTCCATATTAGC +
Preference number: 5 (lower is better)
Translates to: LGASDTHVQQQVSKQAPRSLVFS*YRFHIS
Trigger: GCTAATATGGAACCTGTACAAGGAGAAAACAAGAGA...TCTCGGGGCTTGTTTGCTGACTTGCTGCTGCACGTGGGTATCAGAAGCACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp CTGATGCCAGCTTCTAACCCTCGAGCTCCATTACACGGACCCAAGCCTAAGGACTTCTCCAGATATAGATaGCTGGATATCACAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LMPASNPRAPLHGPKPKDFSRYR*LDITGK
Trigger: TTTGCCTGTGATATCCAGCAATCTATATCTGGAGAA...GTCCTTAGGCTTGGGTCCGTGTAATGGAGCTCGAGGGTTAGAAGCTGGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS TCA 90 bp ACTACAGACGCAGAGACCCCTTTTATCTGGACTCCAATCCAAACTTaGAATGGGCTGGGTGGACAACGTAACATTCTGCAGAAGGCTTAC +
Preference number: 5 (lower is better)
Translates to: TTDAETPFIWTPIQT*NGLGGQRNILQKAY
Trigger: GTAAGCCTTCTGCAGAATGTTACGTTGTCCACCCAGCCCATTTCAAGTTTGGATTGGAGTCCAGATAAAAGGGGTCTCTGCGTCTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000492039.6
CDS GCA 90 bp CTCCAATCCAAACTTGAAATGGGCTGGGTGGACAACGTAACATTCTaGAGAAGGCTTACAGAACCTGCGACTCCCATTTCTATTCCCTCA +
Preference number: 5 (lower is better)
Translates to: LQSKLEMGWVDNVTF*RRLTEPATPISIPS
Trigger: TGAGGGAATAGAAATGGGAGTCGCAGGTTCTGTAAGCCTTCTGCAGAATGTTACGTTGTCCACCCAGCCCATTTCAAGTTTGGATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000492039.6
CDS-3UTR CAA 90 bp TGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGACTCCAATCCAAACTaGAAATGGGCTGGGTGGACA +
Preference number: 5 (lower is better)
Translates to: WLGSFIISQIQLCSMRVRDSNPN*KWAGWT
Trigger: TGTCCACCCAGCCCATTTCAAGTTTGGATTGGAGTC...TCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp CAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCAGCAGCCTCAGGCTCTGTaGGGGTCTATCACAATGATG +
Preference number: 5 (lower is better)
Translates to: QKANSVIRSFLETNQQPQQPQAL*GSITMM
Trigger: CATCATTGTGATAGACCCCAACAGAGCCTGAGGCTG...CTGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp GACCCAAGCCTAAGGACCTTTTGTGTACCATTTCTATGGGAAGGCGTCACAGGGAAGCCTAAGGACCTTTaGTGTACCATTTCTATGGGA +
Preference number: 5 (lower is better)
Translates to: DPSLRTFCVPFLWEGVTGKPKDL*CTISMG
Trigger: TCCCATAGAAATGGTACACAAAAGGTCCTTAGGCTT...CCCTGTGACGCCTTCCCATAGAAATGGTACACAAAAGGTCCTTAGGCTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR CAA 90 bp GGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAGGACTCAACAGGATCATCTTTTaGCCTTGGGTCCCACACCTT +
Preference number: 5 (lower is better)
Translates to: GSFIISQIQLCSMRVRGLNRIIF*PWVPHL
Trigger: AAGGTGTGGGACCCAAGGCAAAAAGATGATCCTGTT...GAGTCCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp GCAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCAGTGATGTTAGCGCCCTaGGGATTCAGAAAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: AESKFSDKIFPGDQSAASVMLAP*GFRKWC
Trigger: ACACCACTTTCTGAATCCCAAGGGCGCTAACATCAC...TGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp TTTAGGCAAGGAACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACCTACACACCCCATTTTaGATGTTTGTCTCCCACCGT +
Preference number: 5 (lower is better)
Translates to: FRQGTLSPSFRGSECSNHLHTPF*MFVSHR
Trigger: ACGGTGGGAGACAAACATCAAAAATGGGGTGTGTAG...GTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGTTCCTTGCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCCAGCCAAATCCAGCTTaGTTCAATGAGGGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVQPNPA*FNEGQR
Trigger: CCTCTGACCCTCATTGAACAAAGCTGGATTTGGCTG...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp AATCAGCAGCCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTAAATTTCAGCCTCAGGCTCTGTaGGGGTCTATCACAATGATG +
Preference number: 5 (lower is better)
Translates to: NQQPQALLGSITMMLSKFQPQAL*GSITMM
Trigger: CATCATTGTGATAGACCCCAACAGAGCCTGAGGCTG...AAATTTAGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGGCTGCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp CCTCAGGCTCTGTTGGGGTCTATCACAATGATGTTATCTAAATTTAGGCAAGGAGTGATGTTAGCGCCCTaGGGATTCAGAAAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: PQALLGSITMMLSKFRQGVMLAP*GFRKWC
Trigger: ACACCACTTTCTGAATCCCAAGGGCGCTAACATCAC...TCCTTGCCTAAATTTAGATAACATCATTGTGATAGACCCCAACAGAGCCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp CAGAAAGCAAATTCAGTGATAAGATCTTTCCTGGAGACCAATCAGCAGCCTCAGGTCCAACAGTCTCTCTaGTTTTCTCCTTGTACAGGT +
Preference number: 5 (lower is better)
Translates to: QKANSVIRSFLETNQQPQVQQSL*FSPCTG
Trigger: ACCTGTACAAGGAGAAAACAAGAGAGACTGTTGGAC...CTGAGGCTGCTGATTGGTCTCCAGGAAAGATCTTATCACTGAATTTGCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp TTTAGGCAAGGAACCCTTTCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACAGGCAAAACCTTTGGTaGGATGCTGTGTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: FRQGTLSPSFRGSECSNHRQNLW*DAVFSC
Trigger: ACATGAGAACACAGCATCCAACCAAAGGTTTTGCCT...GTGATTAGAACACTCACTGCCTCTAAAAGATGGGGAAAGGGTTCCTTGCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp TGGCTGGGGTCTTTTATCATCAGCCAAATCCAGCTTTGTTCAATGAGGGTCAGAACCAACCGTGCCGTTTaGAGAGAGAGAGATATATAT +
Preference number: 5 (lower is better)
Translates to: WLGSFIISQIQLCSMRVRTNRAV*RERDIY
Trigger: ATATATATCTCTCTCTCTCAAAACGGCACGGTTGGT...TCTGACCCTCATTGAACAAAGCTGGATTTGGCTGATGATAAAAGACCCCAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp AAAGAACTGGCCCTGGAGATAGTTTACTTGGTGCTTCTGATACCCACGTGCAGCAAAACCCCTACAATCTaGTACATTTCACCATCACTT +
Preference number: 5 (lower is better)
Translates to: KELALEIVYLVLLIPTCSKTPTI*YISPSL
Trigger: AAGTGATGGTGAAATGTACAAGATTGTAGGGGTTTT...GCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp GTTCAATCTAATCCTACTTTACACCCACAGGTAACTTTAAAAGGAGCAGTGTGCAACAGGATCATCTTTTaGCCTTGGGTCCCACACCTT +
Preference number: 5 (lower is better)
Translates to: VQSNPTLHPQVTLKGAVCNRIIF*PWVPHL
Trigger: AAGGTGTGGGACCCAAGGCAAAAAGATGATCCTGTT...GCACACTGCTCCTTTTAAAGTTACCTGTGGGTGTAAAGTAGGATTAGATTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp TTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTAACAGGATCATCTTTTaGCCTTGGGTCCCACACCTT +
Preference number: 5 (lower is better)
Translates to: LNDLVSVMLAPLGFRKWCNRIIF*PWVPHL
Trigger: AAGGTGTGGGACCCAAGGCAAAAAGATGATCCTGTT...ACACCACTTTCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS TCA 90 bp TTTATTGAGCTTTGTAACGATCAGTACTCTCACCGTTTGGTCAAATaGACTACAGACGCAGAGACCCCTTTTATCTGGACTCCAATCCAA +
Preference number: 5 (lower is better)
Translates to: FIELCNDQYSHRLVK*TTDAETPFIWTPIQ
Trigger: TTGGATTGGAGTCCAGATAAAAGGGGTCTCTGCGTCTGTAGTTCATTTGACCAAACGGTGAGAGTACTGATCGTTACAAAGCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp ATCTGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGCATAGTAAAAGCTTCTGCTGTAAAGATGTaGCACCAAATGTTCCACATT +
Preference number: 5 (lower is better)
Translates to: ICDVSALGIQKVVCIVKASAVKM*HQMFHI
Trigger: AATGTGGAACATTTGGTGCAACATCTTTACAGCAGA...AGCTTTTACTATGCACACCACTTTCTGAATCCCAAGGGCGCTAACATCACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp TTAAATGATCTAGTATCTGTGATGTTAGCGCCCTTGGGATTCAGAAAGTGGTGTGTCCAACAGTCTCTCTaGTTTTCTCCTTGTACAGGT +
Preference number: 5 (lower is better)
Translates to: LNDLVSVMLAPLGFRKWCVQQSL*FSPCTG
Trigger: ACCTGTACAAGGAGAAAACAAGAGAGACTGTTGGAC...ACACCACTTTCTGAATCCCAAGGGCGCTAACATCACAGATACTAGATCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp TTTTCTCCAGATATAGATTGCTGGATATCACAGGCAAACAATGTGCAAAGGCAACTACACACCCCATTTTaGATGTTTGTCTCCCACCGT +
Preference number: 5 (lower is better)
Translates to: FSPDIDCWISQANNVQRQLHTPF*MFVSHR
Trigger: ACGGTGGGAGACAAACATCAAAAATGGGGTGTGTAG...TTGCCTTTGCACATTGTTTGCCTGTGATATCCAGCAATCTATATCTGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457114.5
CDS-3UTR CAA 90 bp GGGTCTATCACAATGATGTTATCTAAATTTAGGCAAGGAACCCTTTCCCCATCTAGGCAAAACCTTTGGTaGGATGCTGTGTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: GSITMMLSKFRQGTLSPSRQNLW*DAVFSC
Trigger: ACATGAGAACACAGCATCCAACCAAAGGTTTTGCCT...AGATGGGGAAAGGGTTCCTTGCCTAAATTTAGATAACATCATTGTGATAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp GACTCCAGAACCTATCTTAAATTGTGTGAGTGTTCCTCTGGAAGGTTTCAAGTCTCTGCTGTAAAGATGTaGCACCAAATGTTCCACATT +
Preference number: 5 (lower is better)
Translates to: DSRTYLKLCECSSGRFQVSAVKM*HQMFHI
Trigger: AATGTGGAACATTTGGTGCAACATCTTTACAGCAGA...GACTTGAAACCTTCCAGAGGAACACTCACACAATTTAAGATAGGTTCTGGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS-3UTR CAA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTCTACACACCCCATTTTaGATGTTTGTCTCCCACCGT +
Preference number: 5 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTLHTPF*MFVSHR
Trigger: ACGGTGGGAGACAAACATCAAAAATGGGGTGTGTAG...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp GTTCAATCTAATCCTACTTTACACCCACAGGTAACTTTAAAAGGAGCAGTGTGCTCTCTTGTTTTCTCCTaGTACAGGTTCCATATTAGC +
Preference number: 5 (lower is better)
Translates to: VQSNPTLHPQVTLKGAVCSLVFS*YRFHIS
Trigger: GCTAATATGGAACCTGTACAAGGAGAAAACAAGAGA...GCACACTGCTCCTTTTAAAGTTACCTGTGGGTGTAAAGTAGGATTAGATTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp TCCCCATCTTTTAGAGGCAGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATTCTGCTGTAAAGATGTaGCACCAAATGTTCCACATT +
Preference number: 5 (lower is better)
Translates to: SPSFRGSECSNHFKIVSDSAVKM*HQMFHI
Trigger: AATGTGGAACATTTGGTGCAACATCTTTACAGCAGA...ATCAGATACTATCTTGAAGTGATTAGAACACTCACTGCCTCTAAAAGATGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS-3UTR CAA 90 bp AGTGAGTGTTCTAATCACTTCAAGATAGTATCTGATAAAAGTCTTGGGCCAACTTCTCTTGTTTTCTCCTaGTACAGGTTCCATATTAGC +
Preference number: 5 (lower is better)
Translates to: SECSNHFKIVSDKSLGPTSLVFS*YRFHIS
Trigger: GCTAATATGGAACCTGTACAAGGAGAAAACAAGAGA...AGTTGGCCCAAGACTTTTATCAGATACTATCTTGAAGTGATTAGAACACTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS CCA 72 bp GCAGGCATCCTGGTGCCCGCTTTGGCTGGACTGCACTaGGGGTGGCAGGACGGTTGGGCGCGGAGGAACTAC +
Preference number: 6 (lower is better)
Translates to: AGILVPALAGLH*GWQDGWARRNY
Trigger: GTAGTTCCTCCGCGCCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 72 bp CAACCACACTGCAGGCATCCTGGTGCCCGCTTTGGCTaGACTGCACTGGGGGTGGCAGGACGGTTGGGCGCG +
Preference number: 6 (lower is better)
Translates to: QPHCRHPGARFG*TALGVAGRLGA
Trigger: CGCGCCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 72 bp GCGGTCAGCTTCTCTGGTCTCGCGCGGCTCAAGCCATaGTTTGGGGGACGCTGGGCGAAGGCTCTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: AVSFSGLARLKP*FGGRWAKALAK
Trigger: CTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTGACCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 72 bp GGTCTCGCGCGGCTCAAGCCATGCTTTGGGGGACGCTaGGCGAAGGCTCTGGCAAAGAGGAATGCAGACCCC +
Preference number: 6 (lower is better)
Translates to: GLARLKPCFGGR*AKALAKRNADP
Trigger: GGGGTCTGCATTCCTCTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 72 bp AGGTTGCCTCTTCCAACCACACTGCAGGCATCCTGGTaGCCGCTTTGGCTGGACTGCACTGGGGGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: RLPLPTTLQASW*PLWLDCTGGGR
Trigger: CCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGAGGCAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 72 bp GCTTTGGCTGGACTGCACTGGGGGTGGCAGGACGGTTaGGCGCGGAGGAACTACCCCGCGGATGAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: ALAGLHWGWQDG*ARRNYPADEKK
Trigger: TTTCTTCTCATCCGCGGGGTAGTTCCTCCGCGCCCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CAA 72 bp TCTTCCAACCACACTGCAGGCATCCTGGTGCCCGCTTaGGCTGGACTGCACTGGGGGTGGCAGGACGGTTGG +
Preference number: 6 (lower is better)
Translates to: SSNHTAGILVPA*AGLHWGWQDGW
Trigger: CCAACCGTCCTGCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CAA 90 bp AGTCGGCGGTCAGCTTCTCTGGTCTCGCGCGGCTCAAGCCATGCTTaGGGGGACGCTGGGCGAAGGCTCTGGCAAAGAGGAATGCAGACC +
Preference number: 6 (lower is better)
Translates to: SRRSASLVSRGSSHA*GDAGRRLWQRGMQT
Trigger: GGTCTGCATTCCTCTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTGACCGCCGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS TCA 72 bp GCTTCAGGTCCCCGTGCTGGATCTCGTACAGCTGAATaGCGCCGGTGCCCCGTGCGAAGTTGCCCATGGTCA +
Preference number: 6 (lower is better)
Translates to: ASGPRAGSRTAE*RRCPVRSCPWS
Trigger: TGACCATGGGCAACTTCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCAGCACGGGGACCTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS TCA 72 bp AGCAGCTTCAGGTCCCCGTGCTGGATCTCGTACAGCTaGATGACGCCGGTGCCCCGTGCGAAGTTGCCCATG +
Preference number: 6 (lower is better)
Translates to: SSFRSPCWISYS*MTPVPRAKLPM
Trigger: CATGGGCAACTTCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCAGCACGGGGACCTGAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS CCA 72 bp CAGCTTCTCTGGTCTCGCGCGGCTCAAGCCATGCTTTaGGGGACGCTGGGCGAAGGCTCTGGCAAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: QLLWSRAAQAML*GTLGEGSGKEE
Trigger: TTCCTCTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CCA 72 bp GTTAGGTTGCCTCTTCCAACCACACTGCAGGCATCCTaGTGCCCGCTTTGGCTGGACTGCACTGGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: VRLPLPTTLQAS*CPLWLDCTGGG
Trigger: GCCACCCCCAGTGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGAGGCAACCTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CAA 72 bp TCAGCTTCTCTGGTCTCGCGCGGCTCAAGCCATGCTTaGGGGGACGCTGGGCGAAGGCTCTGGCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: SASLVSRGSSHA*GDAGRRLWQRG
Trigger: TCCTCTTTGCCAGAGCCTTCGCCCAGCGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 72 bp CCGGCGCCTCCAGCTGTCAGAAAGAGCTCCCTGTTCTaGGGCAGGTGTCGGACCTGCCACACAGTAGATTTA +
Preference number: 6 (lower is better)
Translates to: PAPPAVRKSSLF*GRCRTCHTVDL
Trigger: TAAATCTACTGTGTGGCAGGTCCGACACCTGCCGCAGAACAGGGAGCTCTTTCTGACAGCTGGAGGCGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295121.11
ENST00000406245.6
ENST00000409164.1
ENST00000457114.5
ENST00000492039.6
CDS CCA 72 bp CGGTGCCCCGTGCGAAGTTGCCCATGGTCACAAATTTaGCGCTGCAGGGCACCCACTTACAGTCAAACACCG +
Preference number: 6 (lower is better)
Translates to: RCPVRSCPWSQI*RCRAPTYSQTP
Trigger: CGGTGTTTGACTGTAAGTGGGTGCCCTGCAGCGCCAAATTTGTGACCATGGGCAACTTCGCACGGGGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS CAA 72 bp CCGGTGCCCCGTGCGAAGTTGCCCATGGTCACAAATTaGGCGCTGCAGGGCACCCACTTACAGTCAAACACC +
Preference number: 6 (lower is better)
Translates to: PVPRAKLPMVTN*ALQGTHLQSNT
Trigger: GGTGTTTGACTGTAAGTGGGTGCCCTGCAGCGCCAAATTTGTGACCATGGGCAACTTCGCACGGGGCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS GCA 72 bp CTGGATCTCGTACAGCTGAATGACGCCGGTGCCCCGTaGGAAGTTGCCCATGGTCACAAATTTGGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: LDLVQLNDAGAP*EVAHGHKFGAA
Trigger: TGCAGCGCCAAATTTGTGACCATGGGCAACTTCGCACGGGGCACCGGCGTCATTCAGCTGTACGAGATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS CCA 72 bp AATAGGAAACATTCCTCAGTCGGCGGTCAGCTTCTCTaGTCTCGCGCGGCTCAAGCCATGCTTTGGGGGACG +
Preference number: 6 (lower is better)
Translates to: NRKHSSVGGQLL*SRAAQAMLWGT
Trigger: CGTCCCCCAAAGCATGGCTTGAGCCGCGCGAGACCAGAGAAGCTGACCGCCGACTGAGGAATGTTTCCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 72 bp CTGTCGAATGTGTTAGGTTGCCTCTTCCAACCACACTaGAGGCATCCTGGTGCCCGCTTTGGCTGGACTGCA +
Preference number: 6 (lower is better)
Translates to: LSNVLGCLFQPH*RHPGARFGWTA
Trigger: TGCAGTCCAGCCAAAGCGGGCACCAGGATGCCTGCAGTGTGGTTGGAAGAGGCAACCTAACACATTCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 72 bp CCCGTGCGAAGTTGCCCATGGTCACAAATTTGGCGCTaGAGGGCACCCACTTACAGTCAAACACCGTGTAGT +
Preference number: 6 (lower is better)
Translates to: PVRSCPWSQIWR*RAPTYSQTPCS
Trigger: ACTACACGGTGTTTGACTGTAAGTGGGTGCCCTGCAGCGCCAAATTTGTGACCATGGGCAACTTCGCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295121.11
ENST00000409164.1
ENST00000468984.1
CDS CCA 72 bp CAACCGCCACACCCAGAGCCCCCAAAAACGGCAACCTaGAAACCAGACTCCAAACATTGGCAATTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: QPPHPEPPKTAT*KPDSKHWQFVP
Trigger: AGGGACAAATTGCCAATGTTTGGAGTCTGGTTTCCAGGTTGCCGTTTTTGGGGGCTCTGGGTGTGGCGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468984.1
ENST00000492039.6
CDS CCA 72 bp AGGTTCCATATTAGCAACAGGATCATCTTTTTGCCTTaGGTCCCACACCTTCACAGTTCCATCTCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: RFHISNRIIFLP*VPHLHSSISAA
Trigger: GGCAGCCGAGATGGAACTGTGAAGGTGTGGGACCCAAGGCAAAAAGATGATCCTGTTGCTAATATGGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295121.11
ENST00000406245.6
ENST00000409164.1
ENST00000492039.6
CDS TCA 72 bp GCAGAGACCCCTTTTATCTGGACTCCAATCCAAACTTaGAATGGGCTGGGTGGACAACGTAACATTCTGCAG +
Preference number: 6 (lower is better)
Translates to: AETPFIWTPIQT*NGLGGQRNILQ
Trigger: CTGCAGAATGTTACGTTGTCCACCCAGCCCATTTCAAGTTTGGATTGGAGTCCAGATAAAAGGGGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000492039.6
CDS TCA 72 bp AATCATTCACATCCCTGGGAATACCAGGCACTCAGCTaGTGCCTGTCGAATGTGTTAGGTTGCCTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: NHSHPWEYQALS*CLSNVLGCLFQ
Trigger: TTGGAAGAGGCAACCTAACACATTCGACAGGCATCAGCTGAGTGCCTGGTATTCCCAGGGATGTGAATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS GCA 72 bp AAACTTGAAATGGGCTGGGTGGACAACGTAACATTCTaGAGAAGGCTTACAGAACCTGCGACTCCCATTTCT +
Preference number: 6 (lower is better)
Translates to: KLEMGWVDNVTF*RRLTEPATPIS
Trigger: AGAAATGGGAGTCGCAGGTTCTGTAAGCCTTCTGCAGAATGTTACGTTGTCCACCCAGCCCATTTCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000492039.6
CDS GCA 72 bp ACTTTACACCCACAGGTAACTTTAAAAGGAGCAGTGTaGACTGGCAGACTTACTACTTCCAGAGGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: TLHPQVTLKGAV*TGRLTTSRGEG
Trigger: GCCTTCACCTCTGGAAGTAGTAAGTCTGCCAGTGCACACTGCTCCTTTTAAAGTTACCTGTGGGTGTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000409164.1
CDS TCA 72 bp CTTTGTAACGATCAGTACTCTCACCGTTTGGTCAAATaGACTACAGACGCAGAGACCCCTTTTATCTGGACT +
Preference number: 6 (lower is better)
Translates to: LCNDQYSHRLVK*TTDAETPFIWT
Trigger: AGTCCAGATAAAAGGGGTCTCTGCGTCTGTAGTTCATTTGACCAAACGGTGAGAGTACTGATCGTTACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS CCA 72 bp CTTTTATCTGGACTCCAATCCAAACTTGAAATGGGCTaGGTGGACAACGTAACATTCTGCAGAAGGCTTACA +
Preference number: 6 (lower is better)
Translates to: LLSGLQSKLEMG*VDNVTFCRRLT
Trigger: TGTAAGCCTTCTGCAGAATGTTACGTTGTCCACCCAGCCCATTTCAAGTTTGGATTGGAGTCCAGATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000492039.6
CDS CAA 90 bp AGCATTGCCAAATGCCACAGTCCAACAGTCTCTCTTGTTTTCTCCTaGTACAGGTTCCATATTAGCAACAGGATCATCTTTTTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: SIAKCHSPTVSLVFS*YRFHISNRIIFLPW
Trigger: CCAAGGCAAAAAGATGATCCTGTTGCTAATATGGAACCTGTACAAGGAGAAAACAAGAGAGACTGTTGGACTGTGGCATTTGGCAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295121.11
ENST00000406245.6
ENST00000409164.1
ENST00000492039.6
CDS CAA 72 bp AAAGATGTTGCACCAAATGTTCCACATTTAATAGGTTaGGCCTTTTCAATCTCCCGAAGCAGCTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: KDVAPNVPHLIG*AFSISRSSFRS
Trigger: GGACCTGAAGCTGCTTCGGGAGATTGAAAAGGCCAAACCTATTAAATGTGGAACATTTGGTGCAACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295121.11
ENST00000409164.1
CDS CCA 72 bp TTATTGAGCTTTGTAACGATCAGTACTCTCACCGTTTaGTCAAATGAACTACAGACGCAGAGACCCCTTTTA +
Preference number: 6 (lower is better)
Translates to: LLSFVTISTLTV*SNELQTQRPLL
Trigger: TAAAAGGGGTCTCTGCGTCTGTAGTTCATTTGACCAAACGGTGAGAGTACTGATCGTTACAAAGCTCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295121.11
CDS CAA 72 bp AAATGCCACAGTCCAACAGTCTCTCTTGTTTTCTCCTaGTACAGGTTCCATATTAGCAACAGGATCATCTTT +
Preference number: 6 (lower is better)
Translates to: KCHSPTVSLVFS*YRFHISNRIIF
Trigger: AAAGATGATCCTGTTGCTAATATGGAACCTGTACAAGGAGAAAACAAGAGAGACTGTTGGACTGTGGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295121.11
ENST00000406245.6
ENST00000409164.1
ENST00000492039.6
CDS CAA 72 bp AAAGATGTTGCACCAAATGTTCCACATTTAATAGGTTaGGCCTTTTCAATCATTCACATCCCTGGGAATACC +
Preference number: 6 (lower is better)
Translates to: KDVAPNVPHLIG*AFSIIHIPGNT
Trigger: GGTATTCCCAGGGATGTGAATGATTGAAAAGGCCAAACCTATTAAATGTGGAACATTTGGTGCAACATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468984.1
CDS CAA 72 bp AAAGATGTTGCACCAAATGTTCCACATTTAATAGGTTaGGCCTTTTCAATAGTCAAACACCGTGTAGTTGAA +
Preference number: 6 (lower is better)
Translates to: KDVAPNVPHLIG*AFSIVKHRVVE
Trigger: TTCAACTACACGGTGTTTGACTATTGAAAAGGCCAAACCTATTAAATGTGGAACATTTGGTGCAACATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406245.6
ENST00000492039.6