Pregenerated sensors for WDR89 (Homo sapiens)
Ensembl gene IDs: ENSG00000140006Ensembl transcript IDs: ENST00000267522.7, ENST00000394942.2, ENST00000554717.1, ENST00000620954.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTAGACACATGGGGATTATGGGGATTACAATTCGAGATGAAATTTaGGTGAGGACACAGACAAACCATACCAGCCATTTATGTTATTTC | + |
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Preference number: 1 (lower is better) Translates to: PRHMGIMGITIRDEI*VRTQTNHTSHLCYF Trigger: GAAATAACATAAATGGCTGGTATGGTTTGTCTGTGTCCTCACCCAAATTTCATCTCGAATTGTAATCCCCATAATCCCCATGTGTCTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCGACTTGGTGAAAAACTaGTTAGGAGAAGAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: REASRNLQSWGNAKGKQSDLVKN*LGEEER Trigger: TCTTTCCTCTTCTCCTAACCAGTTTTTCACCAAGTC...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCACAGACGTTAGGAGGTaGAATGGCACAGGACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFTDVRR*NGTGLG Trigger: ACCAAGTCCTGTGCCATTTCACCTCCTAACGTCTGT...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCAGGCAAAAGGATAGCTaGCAGACGTTAGGAGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFRQKDS*QTLGGE Trigger: TTCACCTCCTAACGTCTGTCAGCTATCCTTTTGCCT...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTCTGTTAGTCTGGTTTTaGCCCCTGTATTTATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: QTIPAIYVISNNPLPPFLLLVWF*PLYLSS Trigger: AGAAGATAAATACAGGGGTCAAAACCAGACTAACAG...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTCTCAGATTTATGGTTTaGACAACAGGAAGAATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QTIPAIYVISNNPLPPFLLRFMV*TTGRIA Trigger: TGCTATTCTTCCTGTTGTCCAAACCATAAATCTGAG...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR CCA 72 bp | AGCATGGCCAGGGAGGCCTCAAGAAACTTACAATCATaGGGGAACGCAAAGGGGAAGCAAAGCACCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SMAREASRNLQS*GNAKGKQSTFF Trigger: GAAGAAGGTGCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCTGGCCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCGGCACCATCACGTTTTaGTTTCTTCCCCCTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: REASRNLQSWGNAKGKQSGTITF*FLPPHF Trigger: GAAATGAGGGGGAAGAAACAAAAACGTGATGGTGCC...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| 3UTR-3UTR CAA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTCCTCAGATTTATGGTTaGGACAACAGGAAGAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: QTIPAIYVISNNPLPPFLPQIYG*DNRKNS Trigger: GCTATTCTTCCTGTTGTCCAAACCATAAATCTGAGG...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCCTGAAGAGTTCAGCATaGCCAGGGAGGCCTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSLKSSA*PGRPQE Trigger: TTCTTGAGGCCTCCCTGGCCATGCTGAACTCTTCAG...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCGCCATCAGTACATGCTaGATATACACTGTCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSAISTC*IYTVTG Trigger: TCCTGTGACAGTGTATATTCAGCATGTACTGATGGC...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCCCCAGCATTTCACAGTaGCATCAGTACATGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSPSISQ*HQYMLN Trigger: ATTCAGCATGTACTGATGGCACTGTGAAATGCTGGG...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCTGCTTGGACAGTCTTTaGTGTGTCTATACCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSCLDSL*CVYTKK Trigger: CTTCTTGGTATAGACACATCAAAGACTGTCCAAGCA...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCCTGTTAGTCTGGTTTTaGCCCCTGTATTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSLLVWF*PLYLSS Trigger: AGAAGATAAATACAGGGGTCAAAACCAGACTAACAG...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCGATTACAATTCGAGATaGAATTTGGGTGAGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSDYNSR*NLGEDT Trigger: TGTGTCCTCACCCAAATTTCATCTCGAATTGTAATC...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCAGGAAAGTGTTTAATTaGCTGAAGAGTTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSRKVFN*LKSSAW Trigger: CCATGCTGAACTCTTCAGTCAATTAAACACTTTCCT...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCTTTTCCTTTCCTGCTTaGACAGTCTTTGATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSFSFPA*TVFDVS Trigger: AGACACATCAAAGACTGTCCAAGCAGGAAAGGAAAA...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCATTCGAGATGAAATTTaGGTGAGGACACAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSIRDEI*VRTQTN Trigger: GTTTGTCTGTGTCCTCACCCAAATTTCATCTCGAAT...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGACTGAAGAGTTCAGCATaGCCAGGGAGGCCTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRLKSSA*PGRPQE Trigger: TTCTTGAGGCCTCCCTGGCCATGCTGAACTCTTCAG...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGACACATGGGTCAGTCCTaGCATGCTGCAGTTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRHMGQS*HAAVHQ Trigger: TTGATGAACTGCAGCATGTCAGGACTGACCCATGTG...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAACAGACGTTAGGAGGTaGAATGGCACAGGACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGTDVRR*NGTGLG Trigger: ACCAAGTCCTGTGCCATTTCACCTCCTAACGTCTGT...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCACTGTCACAGGAATTTaGAAATCTGACTCCATTAAG | + |
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Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSTVTGI*KSDSIK Trigger: CTTAATGGAGTCAGATTTGCAAATTCCTGTGACAGT...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCTTGGTGCACAGAGGATaGTATTTTCATACTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSLVHRG*YFHTLF Trigger: AAAGAGAGTATGAAAATAGCATCCTCTGTGCACCAA...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGAGAACAGGTTTTTCTCTaGCTACTCGAGCATCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGREQVFL*LLEHPS Trigger: GCTGGGATGCTCGAGTAGCCAGAGAAAAACCTGTTC...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCCTCAAGAAACTTACAATCATGGGGGAACGCAAAGGGGAAGCAAAGCCTCAGATTTATGGTTTaGACAACAGGAAGAATAGCA | + |
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Preference number: 4 (lower is better) Translates to: REASRNLQSWGNAKGKQSLRFMV*TTGRIA Trigger: TGCTATTCTTCCTGTTGTCCAAACCATAAATCTGAG...GCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGAAGGCAAAAGGATAGCTaGCAGACGTTAGGAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRRQKDS*QTLGGE Trigger: TTCACCTCCTAACGTCTGTCAGCTATCCTTTTGCCT...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGGCAAAAGGATAGCTaGCAGACGTTAGGAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGRQKDS*QTLGGE Trigger: TTCACCTCCTAACGTCTGTCAGCTATCCTTTTGCCT...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGAGCCATCAGTACATGCTaGATATACACTGTCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRAISTC*IYTVTG Trigger: TCCTGTGACAGTGTATATTCAGCATGTACTGATGGC...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCGAACAGGTTTTTCTCTaGCTACTCGAGCATCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFEQVFL*LLEHPS Trigger: GCTGGGATGCTCGAGTAGCCAGAGAAAAACCTGTTC...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGATGCTTGGACAGTCTTTaGTGTGTCTATACCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGCLDSL*CVYTKK Trigger: CTTCTTGGTATAGACACATCAAAGACTGTCCAAGCA...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAGAGATGAAATTTGGGTaGGGACACAGACAAACCATA | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGEMKFG*GHRQTI Trigger: TATGGTTTGTCTGTGTCCTCACCCAAATTTCATCTC...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAAGTGTTTAATTGACTaGAGAGTTCAGCATGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGKCLID*RVQHGQ Trigger: CTGGCCATGCTGAACTCTTCAGTCAATTAAACACTT...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGATCAGTCCTGACATGCTaGAGTTCATCAAATGAATCC | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGSVLTC*SSSNES Trigger: GGATTCATTTGATGAACTGCAGCATGTCAGGACTGA...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCACTCGTACTCGTTGGTaGACAGAGGATGCTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFTRTRW*TEDAIF Trigger: GAAAATAGCATCCTCTGTGCACCAACGAGTACGAGT...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTACTCGTACTCGTTGGTaGACAGAGGATGCTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: QTIPAIYVISNNPLPPFLTRTRW*TEDAIF Trigger: GAAAATAGCATCCTCTGTGCACCAACGAGTACGAGT...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGATTTTCCTTTCCTGCTTaGACAGTCTTTGATGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRFSFPA*TVFDVS Trigger: AGACACATCAAAGACTGTCCAAGCAGGAAAGGAAAA...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGAGACTTGGTGAAAAACTaGTTAGGAGAAGAGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRDLVKN*LGEEER Trigger: TCTTTCCTCTTCTCCTAACCAGTTTTTCACCAAGTC...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGAATTCGAGATGAAATTTaGGTGAGGACACAGACAAAC | + |
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Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRIRDEI*VRTQTN Trigger: GTTTGTCTGTGTCCTCACCCAAATTTCATCTCGAAT...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTAAGTGTTTAATTGACTaGAGAGTTCAGCATGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QTIPAIYVISNNPLPPFLKCLID*RVQHGQ Trigger: CTGGCCATGCTGAACTCTTCAGTCAATTAAACACTT...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAGTTCCTCCAATAACATaGAATGTGTCTGTCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGVPPIT*NVSVFS Trigger: TGAAAAGACAGACACATTGCATGTTATTGGAGGAAC...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTTCAGTCCTGACATGCTaGAGTTCATCAAATGAATCC | + |
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Preference number: 4 (lower is better) Translates to: QTIPAIYVISNNPLPPFLSVLTC*SSSNES Trigger: GGATTCATTTGATGAACTGCAGCATGTCAGGACTGA...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGATTGGTGCACAGAGGATaGTATTTTCATACTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGLVHRG*YFHTLF Trigger: AAAGAGAGTATGAAAATAGCATCCTCTGTGCACCAA...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCGTTCAAACGTGTAACTaGTTCATCAGTGTCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFVQTCN*FISVQM Trigger: CATCTGGACACTGATGAACCAGTTACACGTTTGAAC...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR TCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCGATTACAATTCGAGATaGAATTTGGGTGAGGACACA | + |
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Preference number: 4 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFDYNSR*NLGEDT Trigger: TGTGTCCTCACCCAAATTTCATCTCGAATTGTAATC...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGATTATCCTCAGATTTATaGTTTGGACAACAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: RGKRKAQVILRFMVWTTGLSSDL*FGQQEE Trigger: TTCTTCCTGTTGTCCAAACCATAAATCTGAGGATAA...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGATTATCCTCAGATTTATaGTTTGGACAACAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GKRKAQVILRFMVWTTGRLSSDL*FGQQEE Trigger: TTCTTCCTGTTGTCCAAACCATAAATCTGAGGATAA...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCGACTTGGTGAAAAACTaGTTAGGAGAAGAGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFDLVKN*LGEEER Trigger: TCTTTCCTCTTCTCCTAACCAGTTTTTCACCAAGTC...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTACTGTCACAGGAATTTaGAAATCTGACTCCATTAAG | + |
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Preference number: 4 (lower is better) Translates to: QTIPAIYVISNNPLPPFLTVTGI*KSDSIK Trigger: CTTAATGGAGTCAGATTTGCAAATTCCTGTGACAGT...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR GCA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCGTTCCTCCAATAACATaGAATGTGTCTGTCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFVPPIT*NVSVFS Trigger: TGAAAAGACAGACACATTGCATGTTATTGGAGGAAC...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS CCA 90 bp | GAAGAGTTCAGCATGGCCAGGGAGGCCTCAAGAAACTTACAATCATaGGGGAACGCAAAGGGGAAGCAAAGCACCTTCTTCACAAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: EEFSMAREASRNLQS*GNAKGKQSTFFTRL Trigger: AAGCCTTGTGAAGAAGGTGCTTTGCTTCCCCTTTGCGTTCCCCCATGATTGTAAGTTTCTTGAGGCCTCCCTGGCCATGCTGAACTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAAGAATGAACTCGTACTCGTaGGTGCACAGAGGATGCTAT | + |
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Preference number: 5 (lower is better) Translates to: GKRKAQVILRFMVWTTGRMNSYS*VHRGCY Trigger: ATAGCATCCTCTGTGCACCAACGAGTACGAGTTCAT...TCTTCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGAGGCACCATCACGTTTTaGTTTCTTCCCCCTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: RGKRKAQVILRFMVWTTGGTITF*FLPPHF Trigger: GAAATGAGGGGGAAGAAACAAAAACGTGATGGTGCC...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGACTGCTTGGACAGTCTTaGATGTGTCTATACCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RGKRKAQVILRFMVWTTGLLGQS*MCLYQE Trigger: TTCTTGGTATAGACACATCAAAGACTGTCCAAGCAG...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CAA 90 bp | CAAACCATACCAGCCATTTATGTTATTTCTAATAACCCACTGCCCCCATTTCTTATGAACTCGTACTCGTaGGTGCACAGAGGATGCTAT | + |
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Preference number: 5 (lower is better) Translates to: QTIPAIYVISNNPLPPFLMNSYS*VHRGCY Trigger: ATAGCATCCTCTGTGCACCAACGAGTACGAGTTCAT...AAGAAATGGGGGCAGTGGGTTATTAGAAATAACATAAATGGCTGGTATGGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAAAGAGAAAAGCCCAGGTTATCCTCAGATTTATGGTTTGGACAACAGGACCTCAGATTTATGGTTaGGACAACAGGAAGAATAGC | + |
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Preference number: 5 (lower is better) Translates to: RGKRKAQVILRFMVWTTGPQIYG*DNRKNS Trigger: GCTATTCTTCCTGTTGTCCAAACCATAAATCTGAGG...TCCTGTTGTCCAAACCATAAATCTGAGGATAACCTGGGCTTTTCTCTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS-3UTR CAA 90 bp | CAATGTACTGAAGATTTTAAGCAGCATGAGGCACCATCACGTTTTTGTTTCTTCCTGCTTGGACAGTCTTaGATGTGTCTATACCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: QCTEDFKQHEAPSRFCFFLLGQS*MCLYQE Trigger: TTCTTGGTATAGACACATCAAAGACTGTCCAAGCAG...GAAGAAACAAAAACGTGATGGTGCCTCATGCTGCTTAAAATCTTCAGTACATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394942.2 ENST00000620954.2 |
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| CDS TCA 72 bp | AGCATCCCAGCATTTCACAGTGCCATCAGTACATGCTaGATATACACTGTCACAGGAATTTGCAAATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SIPAFHSAISTC*IYTVTGICKSD Trigger: GTCAGATTTGCAAATTCCTGTGACAGTGTATATTCAGCATGTACTGATGGCACTGTGAAATGCTGGGATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267522.7 ENST00000394942.2 ENST00000554717.1 ENST00000620954.2 |
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