RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR87 (Homo sapiens)

Ensembl gene IDs: ENSG00000171804

Ensembl transcript IDs: ENST00000303868.5, ENST00000447313.7, ENST00000473328.1

Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GAGGAGCCGCTGCTGGTGGACGTGAACCTCTTTACCTCTCCCAGCTaGCCCTTGCCCTGGTGCATAAGGACCCTCACCACCGTCTCACAC +
Preference number: 5 (lower is better)
Translates to: EEPLLVDVNLFTSPS*PLPWCIRTLTTVSH
Trigger: GTGTGAGACGGTGGTGAGGGTCCTTATGCACCAGGGCAAGGGCCAGCTGGGAGAGGTAAAGAGGTTCACGTCCACCAGCAGCGGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CTTGAGACCTGTCCCATTCCAGCTCCCGCTGGGGTGCATGCAGGTTaGACTGTAGGTATATTGGGGTGCCCTCTGGCCAAAGACGGGCAC +
Preference number: 5 (lower is better)
Translates to: LETCPIPAPAGVHAG*TVGILGCPLAKDGH
Trigger: GTGCCCGTCTTTGGCCAGAGGGCACCCCAATATACCTACAGTGCAACCTGCATGCACCCCAGCGGGAGCTGGAATGGGACAGGTCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CAGGCAGGCTCTTCCAGGCAAGTTCTAAGATCCCATACCGGGCAATaGCCACGGGAAGGATGGTGCGCACACAGTTCTGCCATGGGAGGG +
Preference number: 5 (lower is better)
Translates to: QAGSSRQVLRSHTGQ*PREGWCAHSSAMGG
Trigger: CCCTCCCATGGCAGAACTGTGTGCGCACCATCCTTCCCGTGGGCATTGCCCGGTATGGGATCTTAGAACTTGCCTGGAAGAGCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp AGGCAAGTTCTAAGATCCCATACCGGGCAATGCCCACGGGAAGGATaGTGCGCACACAGTTCTGCCATGGGAGGGGTACCGCACCCTGGA +
Preference number: 5 (lower is better)
Translates to: RQVLRSHTGQCPREG*CAHSSAMGGVPHPG
Trigger: TCCAGGGTGCGGTACCCCTCCCATGGCAGAACTGTGTGCGCACCATCCTTCCCGTGGGCATTGCCCGGTATGGGATCTTAGAACTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp TGGAGACCATGTGGGCTATTTGGAGGCCCGTGCCACCTAGCTCAATaGCCCAGGTCACCACTGCCCCCAGGATGCCAGACAGAAGCATCT +
Preference number: 5 (lower is better)
Translates to: WRPCGLFGGPCHLAQ*PRSPLPPGCQTEAS
Trigger: AGATGCTTCTGTCTGGCATCCTGGGGGCAGTGGTGACCTGGGTCATTGAGCTAGGTGGCACGGGCCTCCAAATAGCCCACATGGTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp GCTCTAGCCGCCGAAGCAGGCTCCCTGAAGTCAGGTTCCACTCCTTaGTTAGGCTGTCACTACCAGCTGTTAGCAGGGTGTGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: ALAAEAGSLKSGSTP*LGCHYQLLAGCGPL
Trigger: CAGAGGCCCACACCCTGCTAACAGCTGGTAGTGACAGCCTAATCAAGGAGTGGAACCTGACTTCAGGGAGCCTGCTTCGGCGGCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CAAGTTCTAAGATCCCATACCGGGCAATGCCCACGGGAAGGATGGTaGGCACACAGTTCTGCCATGGGAGGGGTACCGCACCCTGGAACT +
Preference number: 5 (lower is better)
Translates to: QVLRSHTGQCPREGW*AHSSAMGGVPHPGT
Trigger: AGTTCCAGGGTGCGGTACCCCTCCCATGGCAGAACTGTGTGCGCACCATCCTTCCCGTGGGCATTGCCCGGTATGGGATCTTAGAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TCCTGGACAAGCTCATCACCTGGCATGGAGACCATGTGGGCTATTTaGAGGCCCGTGCCACCTAGCTCAATGACCCAGGTCACCACTGCC +
Preference number: 5 (lower is better)
Translates to: SWTSSSPGMETMWAI*RPVPPSSMTQVTTA
Trigger: GGCAGTGGTGACCTGGGTCATTGAGCTAGGTGGCACGGGCCTCCAAATAGCCCACATGGTCTCCATGCCAGGTGATGAGCTTGTCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp GGCTGTCACTACCAGCTGTTAGCAGGGTGTGGGCCTCTGGTCGGCTaGGGATACAGATCACTCCTGATTGATGGGCCTGGAAACTGTGGA +
Preference number: 5 (lower is better)
Translates to: GCHYQLLAGCGPLVG*GYRSLLIDGPGNCG
Trigger: TCCACAGTTTCCAGGCCCATCAATCAGGAGTGATCTGTATCCGCAGCCGACCAGAGGCCCACACCCTGCTAACAGCTGGTAGTGACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp AGCACGATGTCCTGGACAAGCTCATCACCTGGCATGGAGACCATGTaGGCTATTTGGAGGCCCGTGCCACCTAGCTCAATGACCCAGGTC +
Preference number: 5 (lower is better)
Translates to: STMSWTSSSPGMETM*AIWRPVPPSSMTQV
Trigger: GACCTGGGTCATTGAGCTAGGTGGCACGGGCCTCCAAATAGCCCACATGGTCTCCATGCCAGGTGATGAGCTTGTCCAGGACATCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp GCAGCTGATGTTGAAGCGGCAGGGCACTTTACCCAGGGGTTTGAATaGCCGAAAGTGGTCCCCAAAGAGTCGCAGGATCAGGTCACCACA +
Preference number: 5 (lower is better)
Translates to: AADVEAAGHFTQGFE*PKVVPKESQDQVTT
Trigger: TGTGGTGACCTGATCCTGCGACTCTTTGGGGACCACTTTCGGGCATTCAAACCCCTGGGTAAAGTGCCCTGCCGCTTCAACATCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CTGGGCAAGGGCAGCGGGTTGTGTCAAATACCAGAACCTCTGAGCTaGCTGTTGCTACAAAGAGCTCCTCTTTACCTGGGTCGTAGGCCC +
Preference number: 5 (lower is better)
Translates to: LGKGSGLCQIPEPLS*LLLQRAPLYLGRRP
Trigger: GGGCCTACGACCCAGGTAAAGAGGAGCTCTTTGTAGCAACAGGCAGCTCAGAGGTTCTGGTATTTGACACAACCCGCTGCCCTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TGGGACCATTCAGCACGATGTCCTGGACAAGCTCATCACCTGGCATaGAGACCATGTGGGCTATTTGGAGGCCCGTGCCACCTAGCTCAA +
Preference number: 5 (lower is better)
Translates to: WDHSARCPGQAHHLA*RPCGLFGGPCHLAQ
Trigger: TTGAGCTAGGTGGCACGGGCCTCCAAATAGCCCACATGGTCTCCATGCCAGGTGATGAGCTTGTCCAGGACATCGTGCTGAATGGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CGAGCACAGCTGTGCTGGGAGAGCACTCTTATCACACCACTCTGGTaGCCAGAGAATATCAGTCCCTCTAGACCCCGCCCCAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: RAQLCWESTLITPLW*PENISPSRPRPKLK
Trigger: TTTCAACTTGGGGCGGGGTCTAGAGGGACTGATATTCTCTGGGCACCAGAGTGGTGTGATAAGAGTGCTCTCCCAGCACAGCTGTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp AATCGAGCACAGCTGTGCTGGGAGAGCACTCTTATCACACCACTCTaGTGCCCAGAGAATATCAGTCCCTCTAGACCCCGCCCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: NRAQLCWESTLITPL*CPENISPSRPRPKL
Trigger: CAACTTGGGGCGGGGTCTAGAGGGACTGATATTCTCTGGGCACCAGAGTGGTGTGATAAGAGTGCTCTCCCAGCACAGCTGTGCTCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GCTTCAGCCCTTCCCAAGCTAGTTCTCGGATCAGCGGGTTGGAATTaGTTGTATCATTCAGTAGCCGACGGGCTGTCTCAGAGCGTAGGG +
Preference number: 5 (lower is better)
Translates to: ASALPKLVLGSAGWN*LYHSVADGLSQSVG
Trigger: CCCTACGCTCTGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGGGCTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp CTTGGCTGGGCAAGGGCAGCGGGTTGTGTCAAATACCAGAACCTCTaGGCTGCCTGTTGCTACAAAGAGCTCCTCTTTACCTGGGTCGTA +
Preference number: 5 (lower is better)
Translates to: LGWARAAGCVKYQNL*AACCYKELLFTWVV
Trigger: TACGACCCAGGTAAAGAGGAGCTCTTTGTAGCAACAGGCAGCTCAGAGGTTCTGGTATTTGACACAACCCGCTGCCCTTGCCCAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp CTAGACGCTTCAGCCCTTCCCAAGCTAGTTCTCGGATCAGCGGGTTaGAATTGGTTGTATCATTCAGTAGCCGACGGGCTGTCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: LDASALPKLVLGSAG*NWLYHSVADGLSQS
Trigger: GCTCTGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGGGCTGAAGCGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CAGGATCAGGTCACCACAGTAGACCACGAGGATATGAAAGGAGCCTaGATGGACCATGGACTGGATGGGTGGCAATCGTTCAGTCATGGA +
Preference number: 5 (lower is better)
Translates to: QDQVTTVDHEDMKGA*MDHGLDGWQSFSHG
Trigger: TCCATGACTGAACGATTGCCACCCATCCAGTCCATGGTCCATGCAGGCTCCTTTCATATCCTCGTGGTCTACTGTGGTGACCTGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp TCCCTCCAGACAGCGTGGAGAGTGCCAGTACAGCGCCAAAGTGCATaGATTTTTCTAATCGAGCACAGCTGTGCTGGGAGAGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: SLQTAWRVPVQRQSA*IFLIEHSCAGRALL
Trigger: TAAGAGTGCTCTCCCAGCACAGCTGTGCTCGATTAGAAAAATTCATGCACTTTGGCGCTGTACTGGCACTCTCCACGCTGTCTGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp GGCGAGAGGCCGCAGTTGTACTTTGACCCCATCAAGCACAGCTTCTaGCAGGTGCACATAGTCATCCATTCCATAGGAACAGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GERPQLYFDPIKHSF*QVHIVIHSIGTEQR
Trigger: TCTCTGCTCTGTTCCTATGGAATGGATGACTATGTGCACCTGTCAGAAGCTGTGCTTGATGGGGTCAAAGTACAACTGCGGCCTCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp ACAAGCAGGTCACCCCGGTCATTTGCAAAACAGACTGGGCCAAAGTaGAGTGATGAGTCCAGAATGCCTATGAGTCTGCCATGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: TSRSPRSFAKQTGPK*SDESRMPMSLPWKS
Trigger: GGACTTCCATGGCAGACTCATAGGCATTCTGGACTCATCACTGCACTTTGGCCCAGTCTGTTTTGCAAATGACCGGGGTGACCTGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp TGGGAGAGAGGTAACTGTACCTCAGTCTGTCCCATCAGAGGTGGATaGTGCAAAAACCACTTCCACCAGGCACCTAGTGGTTTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: WERGNCTSVCPIRGG*CKNHFHQAPSGLCW
Trigger: CCAACACAAACCACTAGGTGCCTGGTGGAAGTGGTTTTTGCAGCATCCACCTCTGATGGGACAGACTGAGGTACAGTTACCTCTCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TTCTTGGCCAGTTTCTTCCTTTTCTGGGCCAATTTCTCCGCCTCCTaGCTTAGCTTCTCCCCTCTTTGGGCCAGTGTTTCCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FLASFFLFWANFSAS*LSFSPLWASVSSFW
Trigger: CCAGAAAGAGGAAACACTGGCCCAAAGAGGGGAGAAGCTAAGCCAGGAGGCGGAGAAATTGGCCCAGAAAAGGAAGAAACTGGCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp GAGAGAGGTAACTGTACCTCAGTCTGTCCCATCAGAGGTGGATGCTaGAAAAACCACTTCCACCAGGCACCTAGTGGTTTGTGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: ERGNCTSVCPIRGGC*KNHFHQAPSGLCWS
Trigger: ACTCCAACACAAACCACTAGGTGCCTGGTGGAAGTGGTTTTTGCAGCATCCACCTCTGATGGGACAGACTGAGGTACAGTTACCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TCCCATTCTTCCTTCCATGCCTTCCAGGATTTCCTTGTCTCACCATaGACCTGTTTCCACTCATCCCAGGCCTTTTTCCAGTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SHSSFHAFQDFLVSP*TCFHSSQAFFQSCQ
Trigger: TTGGCAGGACTGGAAAAAGGCCTGGGATGAGTGGAAACAGGTCCATGGTGAGACAAGGAAATCCTGGAAGGCATGGAAGGAAGAATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TGCAGCCATTCTAAGTTTCCCTTTGAGGCAAGGTCTTTGAGCAGCTaGCACAGTCTATGGAAACCATCCCTGGAAAGCTGTTCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: CSHSKFPFEARSLSS*HSLWKPSLESCSPA
Trigger: AGCGGGAGAACAGCTTTCCAGGGATGGTTTCCATAGACTGTGCCAGCTGCTCAAAGACCTTGCCTCAAAGGGAAACTTAGAATGGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GTGACTCCAGGGCCTGTCTGTGACGGTACACAATGGCTTCATGTTTaGCCAGATGCAGCCATTCTAAGTTTCCCTTTGAGGCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: VTPGPVCDGTQWLHV*PDAAILSFPLRQGL
Trigger: AAGACCTTGCCTCAAAGGGAAACTTAGAATGGCTGCATCTGGCCAAACATGAAGCCATTGTGTACCGTCACAGACAGGCCCTGGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GTCCATGAGCTGGTAGAACTGTTCCATCCAAGCAGTGCTGTCTTTTaGATATCGCTGCTGCAGCATCCGCAAAACATGGTACAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: VHELVELFHPSSAVF*ISLLQHPQNMVQCH
Trigger: GTGGCACTGTACCATGTTTTGCGGATGCTGCAGCAGCGATATCCAAAAGACAGCACTGCTTGGATGGAACAGTTCTACCAGCTCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp TCTGGTGCCCAGAGAATATCAGTCCCTCTAGACCCCGCCCCAAGTTaGAATGCCCATAAGCCAGGCATTGTACAAAGTCCTGAGAATTTG +
Preference number: 5 (lower is better)
Translates to: SGAQRISVPLDPAPS*NAHKPGIVQSPENL
Trigger: CAAATTCTCAGGACTTTGTACAATGCCTGGCTTATGGGCATTTCAACTTGGGGCGGGGTCTAGAGGGACTGATATTCTCTGGGCACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp TGGCCAGATGCAGCCATTCTAAGTTTCCCTTTGAGGCAAGGTCTTTaGGCAGCTGGCACAGTCTATGGAAACCATCCCTGGAAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: WPDAAILSFPLRQGL*AAGTVYGNHPWKAV
Trigger: AACAGCTTTCCAGGGATGGTTTCCATAGACTGTGCCAGCTGCTCAAAGACCTTGCCTCAAAGGGAAACTTAGAATGGCTGCATCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp TGTCTACTTGAGATCCTTGTGTCTTGTGACTCCAGGGCCTGTCTGTaGCGGTACACAATGGCTTCATGTTTGGCCAGATGCAGCCATTCT +
Preference number: 5 (lower is better)
Translates to: CLLEILVSCDSRACL*RYTMASCLARCSHS
Trigger: AGAATGGCTGCATCTGGCCAAACATGAAGCCATTGTGTACCGTCACAGACAGGCCCTGGAGTCACAAGACACAAGGATCTCAAGTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp CACCACAGTAGACCACGAGGATATGAAAGGAGCCTGCATGGACCATaGACTGGATGGGTGGCAATCGTTCAGTCATGGAGAATGTTCTTT +
Preference number: 5 (lower is better)
Translates to: HHSRPRGYERSLHGP*TGWVAIVQSWRMFF
Trigger: AAAGAACATTCTCCATGACTGAACGATTGCCACCCATCCAGTCCATGGTCCATGCAGGCTCCTTTCATATCCTCGTGGTCTACTGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp AAACTATGGGCAGTTTGGCAGAAGAAAGTAATGCTGTCAATAAACTaGAGCCGGTATAGCTCCTCACCAAGCTCTAGCCGCCGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: KLWAVWQKKVMLSIN*SRYSSSPSSSRRSR
Trigger: CCTGCTTCGGCGGCTAGAGCTTGGTGAGGAGCTATACCGGCTCCAGTTTATTGACAGCATTACTTTCTTCTGCCAAACTGCCCATAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TTCCAAGACAGTTCTTCCATGTCCCATTCCAGTTCCTCCAATTCCTaGGCCAGCTCCTTTTCTTGCCAGTCCAGATTTTGTTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: FQDSSSMSHSSSSNS*ASSFSCQSRFCSLW
Trigger: CCAGAGGGAACAAAATCTGGACTGGCAAGAAAAGGAGCTGGCCCAGGAATTGGAGGAACTGGAATGGGACATGGAAGAACTGTCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp ACATCTGAGAGGCTTACGTCTGCATGTTGTTCCTTAGCTGGGATTTaGGAGAGAGGTAACTGTACCTCAGTCTGTCCCATCAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: TSERLTSACCSLAGI*ERGNCTSVCPIRGG
Trigger: TCCACCTCTGATGGGACAGACTGAGGTACAGTTACCTCTCTCCCAAATCCCAGCTAAGGAACAACATGCAGACGTAAGCCTCTCAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp AAGTTTCCCTTTGAGGCAAGGTCTTTGAGCAGCTGGCACAGTCTATaGAAACCATCCCTGGAAAGCTGTTCTCCCGCTTCCATTCGTTCT +
Preference number: 5 (lower is better)
Translates to: KFPFEARSLSSWHSL*KPSLESCSPASIRS
Trigger: AGAACGAATGGAAGCGGGAGAACAGCTTTCCAGGGATGGTTTCCATAGACTGTGCCAGCTGCTCAAAGACCTTGCCTCAAAGGGAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TCCTTGTGTCTTGTGACTCCAGGGCCTGTCTGTGACGGTACACAATaGCTTCATGTTTGGCCAGATGCAGCCATTCTAAGTTTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SLCLVTPGPVCDGTQ*LHVWPDAAILSFPL
Trigger: CAAAGGGAAACTTAGAATGGCTGCATCTGGCCAAACATGAAGCCATTGTGTACCGTCACAGACAGGCCCTGGAGTCACAAGACACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp TCTCTATGTGACAGGGTCAGGTTTTCATTCAATCTCTGCTCCACTTaGGTGGAAAGGATTTGGAGATCTGTGGCCCGCATCCCCAGTAGA +
Preference number: 5 (lower is better)
Translates to: SLCDRVRFSFNLCST*VERIWRSVARIPSR
Trigger: TCTACTGGGGATGCGGGCCACAGATCTCCAAATCCTTTCCACTCAAGTGGAGCAGAGATTGAATGAAAACCTGACCCTGTCACATAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp TTTCTCCTCTTCCTGAAGAAGCCTCTTCTCCCATTCTTCCTTCCATaGCTTCCAGGATTTCCTTGTCTCACCATGGACCTGTTTCCACTC +
Preference number: 5 (lower is better)
Translates to: FLLFLKKPLLPFFLP*LPGFPCLTMDLFPL
Trigger: GAGTGGAAACAGGTCCATGGTGAGACAAGGAAATCCTGGAAGGCATGGAAGGAAGAATGGGAGAAGAGGCTTCTTCAGGAAGAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp TTCCTGTGTATTCTGGCCCATTTGTGTTCTTCTTGGATGTGTCTCTaGTCTTCTGTGACCTGCTGTTCTTTTTCTTCCCCCTCCCGAGAC +
Preference number: 5 (lower is better)
Translates to: FLCILAHLCSSWMCL*SSVTCCSFSSPSRD
Trigger: GTCTCGGGAGGGGGAAGAAAAAGAACAGCAGGTCACAGAAGAGCAGAGACACATCCAAGAAGAACACAAATGGGCCAGAATACACAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp CACGAGGATATGAAAGGAGCCTGCATGGACCATGGACTGGATGGGTaGCAATCGTTCAGTCATGGAGAATGTTCTTTTCTCAACCATGTC +
Preference number: 5 (lower is better)
Translates to: HEDMKGACMDHGLDG*QSFSHGECSFLNHV
Trigger: GACATGGTTGAGAAAAGAACATTCTCCATGACTGAACGATTGCCACCCATCCAGTCCATGGTCCATGCAGGCTCCTTTCATATCCTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp AGACCACGAGGATATGAAAGGAGCCTGCATGGACCATGGACTGGATaGGTGGCAATCGTTCAGTCATGGAGAATGTTCTTTTCTCAACCA +
Preference number: 5 (lower is better)
Translates to: RPRGYERSLHGPWTG*VAIVQSWRMFFSQP
Trigger: TGGTTGAGAAAAGAACATTCTCCATGACTGAACGATTGCCACCCATCCAGTCCATGGTCCATGCAGGCTCCTTTCATATCCTCGTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TATGTGACAGGGTCAGGTTTTCATTCAATCTCTGCTCCACTTGAGTaGAAAGGATTTGGAGATCTGTGGCCCGCATCCCCAGTAGATGGT +
Preference number: 5 (lower is better)
Translates to: YVTGSGFHSISAPLE*KGFGDLWPASPVDG
Trigger: ACCATCTACTGGGGATGCGGGCCACAGATCTCCAAATCCTTTCCACTCAAGTGGAGCAGAGATTGAATGAAAACCTGACCCTGTCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TTTCTTTCTTCAATAGGGGGCAGATCTCCTGAAAGAGTTCCCAGCTaGGGTGCCTATCTACCAGCATCTCCTGAGCAAATGTCACTAGCT +
Preference number: 5 (lower is better)
Translates to: FLSSIGGRSPERVPS*GAYLPASPEQMSLA
Trigger: AGCTAGTGACATTTGCTCAGGAGATGCTGGTAGATAGGCACCCCAGCTGGGAACTCTTTCAGGAGATCTGCCCCCTATTGAAGAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GCAGTGCTGTCTTTTGGATATCGCTGCTGCAGCATCCGCAAAACATaGTACAGTGCCACAAATGTCTCCCACAAAGGCAACTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: AVLSFGYRCCSIRKT*YSATNVSHKGNSSF
Trigger: AAAGGAAGAGTTGCCTTTGTGGGAGACATTTGTGGCACTGTACCATGTTTTGCGGATGCTGCAGCAGCGATATCCAAAAGACAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp TCACCATGGACCTGTTTCCACTCATCCCAGGCCTTTTTCCAGTCCTaGCAAGATGGTGTCCTCTCAATCATAACCAGTTTTCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SPWTCFHSSQAFFQS*QDGVLSIITSFPSC
Trigger: ACAAGAAGGAAAACTGGTTATGATTGAGAGGACACCATCTTGGCAGGACTGGAAAAAGGCCTGGGATGAGTGGAAACAGGTCCATGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TGCTCACCTGCATCCAATCTTCCATGTCCTGCAAAGAATAATGCATaGAGGAACGCAGTAACACTGGGCTCCCTTCCTCATCTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: CSPASNLPCPAKNNA*RNAVTLGSLPHLLL
Trigger: TAGAAGAAGATGAGGAAGGGAGCCCAGTGTTACTGCGTTCCTCCATGCATTATTCTTTGCAGGACATGGAAGATTGGATGCAGGTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TGTTCTTCTTCCCTTGGCATCACTTCCTTGTGTCTGATCACCTCTTaGGTCACACCTTGTATCATGTCCTCTCTAATTGCTCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: CSSSLGITSLCLITS*VTPCIMSSLIAPSW
Trigger: CCAGGAAGGAGCAATTAGAGAGGACATGATACAAGGTGTGACCCAAGAGGTGATCAGACACAAGGAAGTGATGCCAAGGGAAGAAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GACCTGTTTCCACTCATCCCAGGCCTTTTTCCAGTCCTGCCAAGATaGTGTCCTCTCAATCATAACCAGTTTTCCTTCTTGTTTGACCAC +
Preference number: 5 (lower is better)
Translates to: DLFPLIPGLFPVLPR*CPLNHNQFSFLFDH
Trigger: GTGGTCAAACAAGAAGGAAAACTGGTTATGATTGAGAGGACACCATCTTGGCAGGACTGGAAAAAGGCCTGGGATGAGTGGAAACAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GGTTTGTGTTGGAGTTCCTCAGCTTCCACGGTCCTCCTTAATATGTaGGACATAAATGGGGTCTTTAAGTCCTGTGCTTGGGACTCCAAA +
Preference number: 5 (lower is better)
Translates to: GLCWSSSASTVLLNM*DINGVFKSCAWDSK
Trigger: TTTGGAGTCCCAAGCACAGGACTTAAAGACCCCATTTATGTCCCACATATTAAGGAGGACCGTGGAAGCTGAGGAACTCCAACACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TCCATGGGGAATATCCTCCTTTGTCAATCTGGGCTAACAGTTATATaGGCATGGCTCTTGGAGAATGGGCCAAGAAGGGTAAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SMGNILLCQSGLTVI*AWLLENGPRRVRKA
Trigger: TGCCTTTCTTACCCTTCTTGGCCCATTCTCCAAGAGCCATGCCCATATAACTGTTAGCCCAGATTGACAAAGGAGGATATTCCCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS CCA 90 bp TTCCAGACCACATTCATCCATGGGGAATATCCTCCTTTGTCAATCTaGGCTAACAGTTATATGGGCATGGCTCTTGGAGAATGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: FQTTFIHGEYPPLSI*ANSYMGMALGEWAK
Trigger: CTTGGCCCATTCTCCAAGAGCCATGCCCATATAACTGTTAGCCCAGATTGACAAAGGAGGATATTCCCCATGGATGAATGTGGTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS TCA 90 bp AGTAATAGCATACACACGGCATATTTTGAGGATAGCGAGACTCTTTaGACAGTACCTGGGACCGGTCACTCAGCACAATCAGGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SNSIHTAYFEDSETL*TVPGTGHSAQSGSS
Trigger: AGAACTGCCTGATTGTGCTGAGTGACCGGTCCCAGGTACTGTTCAAAGAGTCTCGCTATCCTCAAAATATGCCGTGTGTATGCTATTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447313.7
ENST00000473328.1
CDS TCA 90 bp TGTTTGATGTCACCCAAGAGAGGGAGGCGAAGAAGTGGGCATCACTaGAGTAATAGCATACACACGGCATATTTTGAGGATAGCGAGACT +
Preference number: 5 (lower is better)
Translates to: CLMSPKRGRRRSGHH*SNSIHTAYFEDSET
Trigger: AGTCTCGCTATCCTCAAAATATGCCGTGTGTATGCTATTACTTCAGTGATGCCCACTTCTTCGCCTCCCTCTCTTGGGTGACATCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447313.7
ENST00000473328.1
CDS CCA 90 bp AAAGTCTCTTGTTTTTGGGTCAGCTGTAAGAGTGAGGTCCTAGAGTaGATTCCAATCTCAGCCATGAGGCTTAGGGTCTTGATCCTCACT +
Preference number: 5 (lower is better)
Translates to: KVSCFWVSCKSEVLE*IPISAMRLRVLILT
Trigger: AGTGAGGATCAAGACCCTAAGCCTCATGGCTGAGATTGGAATCCACTCTAGGACCTCACTCTTACAGCTGACCCAAAAACAAGAGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TCCTGGGTTATTTTCACGTATGCCTGGGCCAGTTTTCTCTCTTCCTaGGCCAACTGTCTCTCTTCTTGTGCAAGTTTCTCTTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SWVIFTYAWASFLSS*ANCLSSCASFSSSC
Trigger: ACAAGAAGAAGAGAAACTTGCACAAGAAGAGAGACAGTTGGCCCAGGAAGAGAGAAAACTGGCCCAGGCATACGTGAAAATAACCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GGGAATATCCTCCTTTGTCAATCTGGGCTAACAGTTATATGGGCATaGCTCTTGGAGAATGGGCCAAGAAGGGTAAGAAAGGCAGTCTTA +
Preference number: 5 (lower is better)
Translates to: GNILLCQSGLTVIWA*LLENGPRRVRKAVL
Trigger: TAAGACTGCCTTTCTTACCCTTCTTGGCCCATTCTCCAAGAGCCATGCCCATATAACTGTTAGCCCAGATTGACAAAGGAGGATATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS CCA 90 bp GTCCTCTCTAATTGCTCCTTCCTGGATAAAAATTGGTTTCTTCTCTaGCGGGACTACATCCCAATCAAGGTCCTCAAGCAGAACCTTACT +
Preference number: 5 (lower is better)
Translates to: VLSNCSFLDKNWFLL*RDYIPIKVLKQNLT
Trigger: AGTAAGGTTCTGCTTGAGGACCTTGATTGGGATGTAGTCCCGCCAGAGAAGAAACCAATTTTTATCCAGGAAGGAGCAATTAGAGAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp GCAAATGTCACTAGCTCAGCGTTTAGGTTTTCTGACATTTTTGTTTaGGAACCAGATATCCTCAGGGCCATAAGACGACATAGATCGTCC +
Preference number: 5 (lower is better)
Translates to: ANVTSSAFRFSDIFV*EPDILRAIRRHRSS
Trigger: GGACGATCTATGTCGTCTTATGGCCCTGAGGATATCTGGTTCCCAAACAAAAATGTCAGAAAACCTAAACGCTGAGCTAGTGACATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp ACCTTGTATCATGTCCTCTCTAATTGCTCCTTCCTGGATAAAAATTaGTTTCTTCTCTGGCGGGACTACATCCCAATCAAGGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: TLYHVLSNCSFLDKN*FLLWRDYIPIKVLK
Trigger: CTTGAGGACCTTGATTGGGATGTAGTCCCGCCAGAGAAGAAACCAATTTTTATCCAGGAAGGAGCAATTAGAGAGGACATGATACAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TGGTGGCAGGATAAAAGTATTGCATTTCCATCTCCTTGTGAGCAATaGATATCTGCTGTGCCCTCTCACTTCTGTAAGGTTCTCCTAGAA +
Preference number: 5 (lower is better)
Translates to: WWQDKSIAFPSPCEQ*ISAVPSHFCKVLLE
Trigger: TTCTAGGAGAACCTTACAGAAGTGAGAGGGCACAGCAGATATCCATTGCTCACAAGGAGATGGAAATGCAATACTTTTATCCTGCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp AAAGGGCTTTTTAGAACTCCTAGTCTTATAGCCCTGCCTTTGCCATaGGGAACTCCTCTTAAAATGGAAAGGACTCTTTCCCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: KGLFRTPSLIALPLP*GTPLKMERTLSLPL
Trigger: AAGAGGAAGGGAAAGAGTCCTTTCCATTTTAAGAGGAGTTCCTCATGGCAAAGGCAGGGCTATAAGACTAGGAGTTCTAAAAAGCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TGCCCTAGTGCACCAACACAGCACTGGTACTTCAGCAAGGAAGCATaGACCATAATATTGAGCATTGTCTCAATCATGCTATTAATGGTT +
Preference number: 5 (lower is better)
Translates to: CPSAPTQHWYFSKEA*TIILSIVSIMLLMV
Trigger: AACCATTAATAGCATGATTGAGACAATGCTCAATATTATGGTCCATGCTTCCTTGCTGAAGTACCAGTGCTGTGTTGGTGCACTAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp ATTAATGGTTATTTCACTCATCTTTCTTCCCAGCCAACTTCGGTTTaGTCCATCTGTAAGGACACTGTAGGTTACATCCTTGGAAAGTCT +
Preference number: 5 (lower is better)
Translates to: INGYFTHLSSQPTSV*SICKDTVGYILGKS
Trigger: AGACTTTCCAAGGATGTAACCTACAGTGTCCTTACAGATGGAGCAAACCGAAGTTGGCTGGGAAGAAAGATGAGTGAAATAACCATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CTTTCTCTTGAGAATCAACATCTTTTGAGAGCTTTATTACACTGGTaGTTGAAGACCATTGGGAATAGACGGATGCTTCCTCCATCTCAA +
Preference number: 5 (lower is better)
Translates to: LSLENQHLLRALLHW*LKTIGNRRMLPPSQ
Trigger: TTGAGATGGAGGAAGCATCCGTCTATTCCCAATGGTCTTCAAGCACCAGTGTAATAAAGCTCTCAAAAGATGTTGATTCTCAAGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp CTTGTCTCTTTTGTCACGTATTTTCTGCAGCCTCTTCAGGGTCAATaGAATGTGATCCTTCGAGATATCTTTCTCTTGAGAATCAACATC +
Preference number: 5 (lower is better)
Translates to: LVSFVTYFLQPLQGQ*NVILRDIFLLRINI
Trigger: GATGTTGATTCTCAAGAGAAAGATATCTCGAAGGATCACATTGCATTGACCCTGAAGAGGCTGCAGAAAATACGTGACAAAAGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 90 bp GACACTTCTTCCTCCAAAGTCACTTCTTCCTCATCCTTGTACTGTTaGTCCTTGGACTTAGATGATAACATATTTTCCCAGACTTGTTTC +
Preference number: 5 (lower is better)
Translates to: DTSSSKVTSSSSLYC*SLDLDDNIFSQTCF
Trigger: GAAACAAGTCTGGGAAAATATGTTATCATCTAAGTCCAAGGAGCAACAGTACAAGGATGAGGAAGAAGTGACTTTGGAGGAAGAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TATCTTTCTCTTGAGAATCAACATCTTTTGAGAGCTTTATTACACTaGTGCTTGAAGACCATTGGGAATAGACGGATGCTTCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: YLSLENQHLLRALLH*CLKTIGNRRMLPPS
Trigger: AGATGGAGGAAGCATCCGTCTATTCCCAATGGTCTTCAAGCACCAGTGTAATAAAGCTCTCAAAAGATGTTGATTCTCAAGAGAAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 90 bp TTTCTTTCCTTCTGGACAGCTTTCCTCCCTTGCTTAGGTGACTTCTaGAAGGTTTTCTTCTCTTCTTTCTTTGATATTTCTTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: FLSFWTAFLPCLGDF*KVFFSSFFDISFPM
Trigger: CATGGGAAAAGAAATATCAAAGAAAGAAGAGAAGAAAACCTTTCAGAAGTCACCTAAGCAAGGGAGGAAAGCTGTCCAGAAGGAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 90 bp TTCCCATCACTTCTCTTTCTTTATCCATTGTCCCTAAGAATTTCCTaGGTATTTCAACTACTGTGGCCTTTTTATCTTCCCAGGATATTT +
Preference number: 5 (lower is better)
Translates to: FPSLLFLYPLSLRIS*VFQLLWPFYLPRIF
Trigger: AAATATCCTGGGAAGATAAAAAGGCCACAGTAGTTGAAATACCCAGGAAATTCTTAGGGACAATGGATAAAGAAAGAGAAGTGATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GCGGATGTTGCGAGAGGACTCCGCCCACAGAACGGTTaGCCCCCAACCCCGCAGCCGGCGGACTTCCCGAGG +
Preference number: 6 (lower is better)
Translates to: ADVARGLRPQNG*PPTPQPADFPR
Trigger: CCTCGGGAAGTCCGCCGGCTGCGGGGTTGGGGGCCAACCGTTCTGTGGGCGGAGTCCTCTCGCAACATCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303868.5
CDS CAA 72 bp GGCGGATGTTGCGAGAGGACTCCGCCCACAGAACGGTaGGCCCCCAACCCCGCAGCCGGCGGACTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: GGCCERTPPTER*APNPAAGGLPE
Trigger: CTCGGGAAGTCCGCCGGCTGCGGGGTTGGGGGCCAACCGTTCTGTGGGCGGAGTCCTCTCGCAACATCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303868.5
CDS GCA 72 bp CTAGGGGCAGCAACTAAGAAGCTACCTGGCGGATGTTaGGAGAGGACTCCGCCCACAGAACGGTTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: LGAATKKLPGGC*ERTPPTERLAP
Trigger: GGGGGCCAACCGTTCTGTGGGCGGAGTCCTCTCGCAACATCCGCCAGGTAGCTTCTTAGTTGCTGCCCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303868.5
CDS GCA 72 bp GCGACAGGATTCCCGACAAGGGACGGGTACGGCGTGTaGACTCAGGAGCTCCTAGAGCTAGGGGCAGCAACT +
Preference number: 6 (lower is better)
Translates to: ATGFPTRDGYGV*TQELLELGAAT
Trigger: AGTTGCTGCCCCTAGCTCTAGGAGCTCCTGAGTGCACACGCCGTACCCGTCCCTTGTCGGGAATCCTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303868.5
ENST00000447313.7
ENST00000473328.1
CDS GCA 72 bp CGTCCCTCCATGATGAGCCATCTCCAGCGGTTGACCTaGGGCCAGATATTCCAGAGGCTCCCCGCCCTTGGA +
Preference number: 6 (lower is better)
Translates to: RPSMMSHLQRLT*GQIFQRLPALG
Trigger: TCCAAGGGCGGGGAGCCTCTGGAATATCTGGCCGCAGGTCAACCGCTGGAGATGGCTCATCATGGAGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp AGATCCCATACCGGGCAATGCCCACGGGAAGGATGGTaGGCACACAGTTCTGCCATGGGAGGGGTACCGCAC +
Preference number: 6 (lower is better)
Translates to: RSHTGQCPREGW*AHSSAMGGVPH
Trigger: GTGCGGTACCCCTCCCATGGCAGAACTGTGTGCGCACCATCCTTCCCGTGGGCATTGCCCGGTATGGGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp TGTGGGCTATTTGGAGGCCCGTGCCACCTAGCTCAATaGCCCAGGTCACCACTGCCCCCAGGATGCCAGACA +
Preference number: 6 (lower is better)
Translates to: CGLFGGPCHLAQ*PRSPLPPGCQT
Trigger: TGTCTGGCATCCTGGGGGCAGTGGTGACCTGGGTCATTGAGCTAGGTGGCACGGGCCTCCAAATAGCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CTGCTGGTGGACGTGAACCTCTTTACCTCTCCCAGCTaGCCCTTGCCCTGGTGCATAAGGACCCTCACCACC +
Preference number: 6 (lower is better)
Translates to: LLVDVNLFTSPS*PLPWCIRTLTT
Trigger: GGTGGTGAGGGTCCTTATGCACCAGGGCAAGGGCCAGCTGGGAGAGGTAAAGAGGTTCACGTCCACCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CTAAGATCCCATACCGGGCAATGCCCACGGGAAGGATaGTGCGCACACAGTTCTGCCATGGGAGGGGTACCG +
Preference number: 6 (lower is better)
Translates to: LRSHTGQCPREG*CAHSSAMGGVP
Trigger: CGGTACCCCTCCCATGGCAGAACTGTGTGCGCACCATCCTTCCCGTGGGCATTGCCCGGTATGGGATCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp CCCGCTGGGGTGCATGCAGGTTGCACTGTAGGTATATaGGGGTGCCCTCTGGCCAAAGACGGGCACGAATCA +
Preference number: 6 (lower is better)
Translates to: PAGVHAGCTVGI*GCPLAKDGHES
Trigger: TGATTCGTGCCCGTCTTTGGCCAGAGGGCACCCCAATATACCTACAGTGCAACCTGCATGCACCCCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp CTGTCCCATTCCAGCTCCCGCTGGGGTGCATGCAGGTaGCACTGTAGGTATATTGGGGTGCCCTCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: LSHSSSRWGACR*HCRYIGVPSGQ
Trigger: TTGGCCAGAGGGCACCCCAATATACCTACAGTGCAACCTGCATGCACCCCAGCGGGAGCTGGAATGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp ATAGATCGTCCCTCCATGATGAGCCATCTCCAGCGGTaGACCTGCGGCCAGATATTCCAGAGGCTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: IDRPSMMSHLQR*TCGQIFQRLPA
Trigger: GGCGGGGAGCCTCTGGAATATCTGGCCGCAGGTCAACCGCTGGAGATGGCTCATCATGGAGGGACGATCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TACCAGCTGTTAGCAGGGTGTGGGCCTCTGGTCGGCTaGGGATACAGATCACTCCTGATTGATGGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: YQLLAGCGPLVG*GYRSLLIDGPG
Trigger: TCCAGGCCCATCAATCAGGAGTGATCTGTATCCGCAGCCGACCAGAGGCCCACACCCTGCTAACAGCTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp CTGTGCTGGGAGAGCACTCTTATCACACCACTCTGGTaGCCAGAGAATATCAGTCCCTCTAGACCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: LCWESTLITPLW*PENISPSRPRP
Trigger: GGGGCGGGGTCTAGAGGGACTGATATTCTCTGGGCACCAGAGTGGTGTGATAAGAGTGCTCTCCCAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TGTCCCATTCCAGCTCCCGCTGGGGTGCATGCAGGTTaGACTGTAGGTATATTGGGGTGCCCTCTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: CPIPAPAGVHAG*TVGILGCPLAK
Trigger: TTTGGCCAGAGGGCACCCCAATATACCTACAGTGCAACCTGCATGCACCCCAGCGGGAGCTGGAATGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp AGCTCATCACCTGGCATGGAGACCATGTGGGCTATTTaGAGGCCCGTGCCACCTAGCTCAATGACCCAGGTC +
Preference number: 6 (lower is better)
Translates to: SSSPGMETMWAI*RPVPPSSMTQV
Trigger: GACCTGGGTCATTGAGCTAGGTGGCACGGGCCTCCAAATAGCCCACATGGTCTCCATGCCAGGTGATGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TCAGCACGATGTCCTGGACAAGCTCATCACCTGGCATaGAGACCATGTGGGCTATTTGGAGGCCCGTGCCAC +
Preference number: 6 (lower is better)
Translates to: SARCPGQAHHLA*RPCGLFGGPCH
Trigger: GTGGCACGGGCCTCCAAATAGCCCACATGGTCTCCATGCCAGGTGATGAGCTTGTCCAGGACATCGTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp AGGAGGGAGCCACTGGGACCATTCAGCACGATGTCCTaGACAAGCTCATCACCTGGCATGGAGACCATGTGG +
Preference number: 6 (lower is better)
Translates to: RREPLGPFSTMS*TSSSPGMETMW
Trigger: CCACATGGTCTCCATGCCAGGTGATGAGCTTGTCCAGGACATCGTGCTGAATGGTCCCAGTGGCTCCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp ATTCCAGCTCCCGCTGGGGTGCATGCAGGTTGCACTGTAGGTATATaGGGGTGCCCTCTGGCCAAAGACGGGCACGAATCACTGAATTGG +
Preference number: 6 (lower is better)
Translates to: IPAPAGVHAGCTVGI*GCPLAKDGHESLNW
Trigger: CCAATTCAGTGATTCGTGCCCGTCTTTGGCCAGAGGGCACCCCAATATACCTACAGTGCAACCTGCATGCACCCCAGCGGGAGCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp GTTGAAGCGGCAGGGCACTTTACCCAGGGGTTTGAATaGCCGAAAGTGGTCCCCAAAGAGTCGCAGGATCAG +
Preference number: 6 (lower is better)
Translates to: VEAAGHFTQGFE*PKVVPKESQDQ
Trigger: CTGATCCTGCGACTCTTTGGGGACCACTTTCGGGCATTCAAACCCCTGGGTAAAGTGCCCTGCCGCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TCTTCCAGGCAAGTTCTAAGATCCCATACCGGGCAATaGCCACGGGAAGGATGGTGCGCACACAGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SSRQVLRSHTGQ*PREGWCAHSSA
Trigger: GGCAGAACTGTGTGCGCACCATCCTTCCCGTGGGCATTGCCCGGTATGGGATCTTAGAACTTGCCTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CAGGGCACTTTACCCAGGGGTTTGAATGCCCGAAAGTaGTCCCCAAAGAGTCGCAGGATCAGGTCACCACAG +
Preference number: 6 (lower is better)
Translates to: QGTLPRGLNARK*SPKSRRIRSPQ
Trigger: CTGTGGTGACCTGATCCTGCGACTCTTTGGGGACCACTTTCGGGCATTCAAACCCCTGGGTAAAGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TCCTGGACAAGCTCATCACCTGGCATGGAGACCATGTaGGCTATTTGGAGGCCCGTGCCACCTAGCTCAATG +
Preference number: 6 (lower is better)
Translates to: SWTSSSPGMETM*AIWRPVPPSSM
Trigger: CATTGAGCTAGGTGGCACGGGCCTCCAAATAGCCCACATGGTCTCCATGCCAGGTGATGAGCTTGTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CAGCTGTGCTGGGAGAGCACTCTTATCACACCACTCTaGTGCCCAGAGAATATCAGTCCCTCTAGACCCCGC +
Preference number: 6 (lower is better)
Translates to: QLCWESTLITPL*CPENISPSRPR
Trigger: GCGGGGTCTAGAGGGACTGATATTCTCTGGGCACCAGAGTGGTGTGATAAGAGTGCTCTCCCAGCACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp CTGATGTTGAAGCGGCAGGGCACTTTACCCAGGGGTTaGAATGCCCGAAAGTGGTCCCCAAAGAGTCGCAGG +
Preference number: 6 (lower is better)
Translates to: LMLKRQGTLPRG*NARKWSPKSRR
Trigger: CCTGCGACTCTTTGGGGACCACTTTCGGGCATTCAAACCCCTGGGTAAAGTGCCCTGCCGCTTCAACATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp TCAGCCCTTCCCAAGCTAGTTCTCGGATCAGCGGGTTGGAATTGGTaGTATCATTCAGTAGCCGACGGGCTGTCTCAGAGCGTAGGGCTG +
Preference number: 6 (lower is better)
Translates to: SALPKLVLGSAGWNW*YHSVADGLSQSVGL
Trigger: CAGCCCTACGCTCTGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp CGCTTCAGCCCTTCCCAAGCTAGTTCTCGGATCAGCGGGTTGGAATaGGTTGTATCATTCAGTAGCCGACGGGCTGTCTCAGAGCGTAGG +
Preference number: 6 (lower is better)
Translates to: RFSPSQASSRISGLE*VVSFSSRRAVSERR
Trigger: CCTACGCTCTGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGGGCTGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp GGGGAAGACATCACCGTCAGACTCCCTTGGCCCTCCTaGGGACTGTTGCTTAAAAACCTGCGACAGGATTCC +
Preference number: 6 (lower is better)
Translates to: GEDITVRLPWPS*GLLLKNLRQDS
Trigger: GGAATCCTGTCGCAGGTTTTTAAGCAACAGTCCTCAGGAGGGCCAAGGGAGTCTGACGGTGATGTCTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303868.5
ENST00000447313.7
ENST00000473328.1
CDS TCA 72 bp GCCGAAGCAGGCTCCCTGAAGTCAGGTTCCACTCCTTaGTTAGGCTGTCACTACCAGCTGTTAGCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: AEAGSLKSGSTP*LGCHYQLLAGC
Trigger: ACACCCTGCTAACAGCTGGTAGTGACAGCCTAATCAAGGAGTGGAACCTGACTTCAGGGAGCCTGCTTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp GGGGTGCATGCAGGTTGCACTGTAGGTATATTGGGGTaGCCTCTGGCCAAAGACGGGCACGAATCACTGAAT +
Preference number: 6 (lower is better)
Translates to: GVHAGCTVGILG*PLAKDGHESLN
Trigger: ATTCAGTGATTCGTGCCCGTCTTTGGCCAGAGGGCACCCCAATATACCTACAGTGCAACCTGCATGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp CTGCTGAGAATGCTGGCGAGAGGCCGCAGTTGTACTTaGACCCCATCAAGCACAGCTTCTGACAGGTGCACA +
Preference number: 6 (lower is better)
Translates to: LLRMLARGRSCT*TPSSTASDRCT
Trigger: TGTGCACCTGTCAGAAGCTGTGCTTGATGGGGTCAAAGTACAACTGCGGCCTCTCGCCAGCATTCTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp CCTAGACGCTTCAGCCCTTCCCAAGCTAGTTCTCGGATCAGCGGGTaGGAATTGGTTGTATCATTCAGTAGCCGACGGGCTGTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: PRRFSPSQASSRISG*ELVVSFSSRRAVSE
Trigger: CTCTGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGGGCTGAAGCGTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp GTCACCACAGTAGACCACGAGGATATGAAAGGAGCCTaGATGGACCATGGACTGGATGGGTGGCAATCGTTC +
Preference number: 6 (lower is better)
Translates to: VTTVDHEDMKGA*MDHGLDGWQSF
Trigger: GAACGATTGCCACCCATCCAGTCCATGGTCCATGCAGGCTCCTTTCATATCCTCGTGGTCTACTGTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TGCCCTCTGGCCAAAGACGGGCACGAATCACTGAATTaGGGATATAGCAGTCAGGGGCAAAAAGCCATTCCC +
Preference number: 6 (lower is better)
Translates to: CPLAKDGHESLN*GYSSQGQKAIP
Trigger: GGGAATGGCTTTTTGCCCCTGACTGCTATATCCCCAATTCAGTGATTCGTGCCCGTCTTTGGCCAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TCAGCCCTTCCCAAGCTAGTTCTCGGATCAGCGGGTTaGAATTGGTTGTATCATTCAGTAGCCGACGGGCTG +
Preference number: 6 (lower is better)
Translates to: SALPKLVLGSAG*NWLYHSVADGL
Trigger: CAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp CCCAAGCTAGTTCTCGGATCAGCGGGTTGGAATTGGTaGTATCATTCAGTAGCCGACGGGCTGTCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: PKLVLGSAGWNW*YHSVADGLSQS
Trigger: GCTCTGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp GCAAGGGCAGCGGGTTGTGTCAAATACCAGAACCTCTaGGCTGCCTGTTGCTACAAAGAGCTCCTCTTTACC +
Preference number: 6 (lower is better)
Translates to: ARAAGCVKYQNL*AACCYKELLFT
Trigger: GGTAAAGAGGAGCTCTTTGTAGCAACAGGCAGCTCAGAGGTTCTGGTATTTGACACAACCCGCTGCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp GAGATCCTTGTGTCTTGTGACTCCAGGGCCTGTCTGTaGCGGTACACAATGGCTTCATGTTTGGCCAGATGC +
Preference number: 6 (lower is better)
Translates to: EILVSCDSRACL*RYTMASCLARC
Trigger: GCATCTGGCCAAACATGAAGCCATTGTGTACCGTCACAGACAGGCCCTGGAGTCACAAGACACAAGGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp GGTAACTGTACCTCAGTCTGTCCCATCAGAGGTGGATaGTGCAAAAACCACTTCCACCAGGCACCTAGTGGT +
Preference number: 6 (lower is better)
Translates to: GNCTSVCPIRGG*CKNHFHQAPSG
Trigger: ACCACTAGGTGCCTGGTGGAAGTGGTTTTTGCAGCATCCACCTCTGATGGGACAGACTGAGGTACAGTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp AGACCACGAGGATATGAAAGGAGCCTGCATGGACCATaGACTGGATGGGTGGCAATCGTTCAGTCATGGAGA +
Preference number: 6 (lower is better)
Translates to: RPRGYERSLHGP*TGWVAIVQSWR
Trigger: TCTCCATGACTGAACGATTGCCACCCATCCAGTCCATGGTCCATGCAGGCTCCTTTCATATCCTCGTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CTTCCCAAGCTAGTTCTCGGATCAGCGGGTTGGAATTaGTTGTATCATTCAGTAGCCGACGGGCTGTCTCAG +
Preference number: 6 (lower is better)
Translates to: LPKLVLGSAGWN*LYHSVADGLSQ
Trigger: CTGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TGGCTATGCTTTTTGACCCCTGCTTGGCCTCGTCTTTaGCCTTTGCTGGGCTTGATGGCCACTTCAGATTCT +
Preference number: 6 (lower is better)
Translates to: WLCFLTPAWPRL*PLLGLMATSDS
Trigger: AGAATCTGAAGTGGCCATCAAGCCCAGCAAAGGCCAAAGACGAGGCCAAGCAGGGGTCAAAAAGCATAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TTTGAGGCAAGGTCTTTGAGCAGCTGGCACAGTCTATaGAAACCATCCCTGGAAAGCTGTTCTCCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: FEARSLSSWHSL*KPSLESCSPAS
Trigger: GGAAGCGGGAGAACAGCTTTCCAGGGATGGTTTCCATAGACTGTGCCAGCTGCTCAAAGACCTTGCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp ACTGTGGAGTGGATGGCCCTGCTGGAGGCTCCAAACTaGGATTTCCCCAGCTTGGTTTCCAGCATAGAGAAA +
Preference number: 6 (lower is better)
Translates to: TVEWMALLEAPN*DFPSLVSSIEK
Trigger: TTTCTCTATGCTGGAAACCAAGCTGGGGAAATCCAAGTTTGGAGCCTCCAGCAGGGCCATCCACTCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp CCTTCCCAAGCTAGTTCTCGGATCAGCGGGTTGGAATaGGTTGTATCATTCAGTAGCCGACGGGCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: PSQASSRISGLE*VVSFSSRRAVS
Trigger: TGAGACAGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TTCAGCCCTTCCCAAGCTAGTTCTCGGATCAGCGGGTaGGAATTGGTTGTATCATTCAGTAGCCGACGGGCT +
Preference number: 6 (lower is better)
Translates to: FSPSQASSRISG*ELVVSFSSRRA
Trigger: AGCCCGTCGGCTACTGAATGATACAACCAATTCCAACCCGCTGATCCGAGAACTAGCTTGGGAAGGGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TTGGCTATGCTTTTTGACCCCTGCTTGGCCTCGTCTTaGGCCTTTGCTGGGCTTGATGGCCACTTCAGATTC +
Preference number: 6 (lower is better)
Translates to: LAMLFDPCLASS*AFAGLDGHFRF
Trigger: GAATCTGAAGTGGCCATCAAGCCCAGCAAAGGCCAAAGACGAGGCCAAGCAGGGGTCAAAAAGCATAGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TGCTGCAAAAACCACTTCCACCAGGCACCTAGTGGTTaGTGTTGGAGTTCCTCAGCTTCCACGGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: CCKNHFHQAPSG*CWSSSASTVLL
Trigger: AAGGAGGACCGTGGAAGCTGAGGAACTCCAACACAAACCACTAGGTGCCTGGTGGAAGTGGTTTTTGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp TGCTTGAAGACCATTGGGAATAGACGGATGCTTCCTCCATCTCAATaGGTGCGGCCTCAGTCCCACTTTCATCCTCTAAGAGGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: CLKTIGNRRMLPPSQ*VRPQSHFHPLRGLA
Trigger: AGCCAGGCCTCTTAGAGGATGAAAGTGGGACTGAGGCCGCACCAATTGAGATGGAGGAAGCATCCGTCTATTCCCAATGGTCTTCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp AGAGGTGGATGCTGCAAAAACCACTTCCACCAGGCACCTAGTGGTTaGTGTTGGAGTTCCTCAGCTTCCACGGTCCTCCTTAATATGTGG +
Preference number: 6 (lower is better)
Translates to: RGGCCKNHFHQAPSG*CWSSSASTVLLNMW
Trigger: CCACATATTAAGGAGGACCGTGGAAGCTGAGGAACTCCAACACAAACCACTAGGTGCCTGGTGGAAGTGGTTTTTGCAGCATCCACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp ACAGCGTGGAGAGTGCCAGTACAGCGCCAAAGTGCATaGATTTTTCTAATCGAGCACAGCTGTGCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: TAWRVPVQRQSA*IFLIEHSCAGR
Trigger: TCTCCCAGCACAGCTGTGCTCGATTAGAAAAATTCATGCACTTTGGCGCTGTACTGGCACTCTCCACGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TCACCCCGGTCATTTGCAAAACAGACTGGGCCAAAGTaGAGTGATGAGTCCAGAATGCCTATGAGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: SPRSFAKQTGPK*SDESRMPMSLP
Trigger: TGGCAGACTCATAGGCATTCTGGACTCATCACTGCACTTTGGCCCAGTCTGTTTTGCAAATGACCGGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp AACTGTACCTCAGTCTGTCCCATCAGAGGTGGATGCTaGAAAAACCACTTCCACCAGGCACCTAGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: NCTSVCPIRGGC*KNHFHQAPSGL
Trigger: CAAACCACTAGGTGCCTGGTGGAAGTGGTTTTTGCAGCATCCACCTCTGATGGGACAGACTGAGGTACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GGGTCAGGTTTTCATTCAATCTCTGCTCCACTTGAGTaGAAAGGATTTGGAGATCTGTGGCCCGCATCCCCA +
Preference number: 6 (lower is better)
Translates to: GSGFHSISAPLE*KGFGDLWPASP
Trigger: TGGGGATGCGGGCCACAGATCTCCAAATCCTTTCCACTCAAGTGGAGCAGAGATTGAATGAAAACCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TCCTTCCATGCCTTCCAGGATTTCCTTGTCTCACCATaGACCTGTTTCCACTCATCCCAGGCCTTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: SFHAFQDFLVSP*TCFHSSQAFFQ
Trigger: CTGGAAAAAGGCCTGGGATGAGTGGAAACAGGTCCATGGTGAGACAAGGAAATCCTGGAAGGCATGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GGGCCTGTCTGTGACGGTACACAATGGCTTCATGTTTaGCCAGATGCAGCCATTCTAAGTTTCCCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: GPVCDGTQWLHV*PDAAILSFPLR
Trigger: CCTCAAAGGGAAACTTAGAATGGCTGCATCTGGCCAAACATGAAGCCATTGTGTACCGTCACAGACAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CTTGTGACTCCAGGGCCTGTCTGTGACGGTACACAATaGCTTCATGTTTGGCCAGATGCAGCCATTCTAAGT +
Preference number: 6 (lower is better)
Translates to: LVTPGPVCDGTQ*LHVWPDAAILS
Trigger: ACTTAGAATGGCTGCATCTGGCCAAACATGAAGCCATTGTGTACCGTCACAGACAGGCCCTGGAGTCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TGCTTTTTGACCCCTGCTTGGCCTCGTCTTTGGCCTTaGCTGGGCTTGATGGCCACTTCAGATTCTTCAGAA +
Preference number: 6 (lower is better)
Translates to: CFLTPAWPRLWP*LGLMATSDSSE
Trigger: TTCTGAAGAATCTGAAGTGGCCATCAAGCCCAGCAAAGGCCAAAGACGAGGCCAAGCAGGGGTCAAAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp TTGGCCAGATGCAGCCATTCTAAGTTTCCCTTTGAGGCAAGGTCTTaGAGCAGCTGGCACAGTCTATGGAAACCATCCCTGGAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: LARCSHSKFPFEARS*SSWHSLWKPSLESC
Trigger: ACAGCTTTCCAGGGATGGTTTCCATAGACTGTGCCAGCTGCTCAAAGACCTTGCCTCAAAGGGAAACTTAGAATGGCTGCATCTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp CAGAGAATATCAGTCCCTCTAGACCCCGCCCCAAGTTaGAATGCCCATAAGCCAGGCATTGTACAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: QRISVPLDPAPS*NAHKPGIVQSP
Trigger: AGGACTTTGTACAATGCCTGGCTTATGGGCATTTCAACTTGGGGCGGGGTCTAGAGGGACTGATATTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp GACAGGGTCAGGTTTTCATTCAATCTCTGCTCCACTTaGGTGGAAAGGATTTGGAGATCTGTGGCCCGCATC +
Preference number: 6 (lower is better)
Translates to: DRVRFSFNLCST*VERIWRSVARI
Trigger: GATGCGGGCCACAGATCTCCAAATCCTTTCCACTCAAGTGGAGCAGAGATTGAATGAAAACCTGACCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp ACCTTACTTTCTTTCTTCAATAGGGGGCAGATCTCCTaGAAGAGTTCCCAGCTGGGGTGCCTATCTACCAGC +
Preference number: 6 (lower is better)
Translates to: TLLSFFNRGQIS*KSSQLGCLSTS
Trigger: GCTGGTAGATAGGCACCCCAGCTGGGAACTCTTTCAGGAGATCTGCCCCCTATTGAAGAAAGAAAGTAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TGTTCCATCCAAGCAGTGCTGTCTTTTGGATATCGCTaGTGCAGCATCCGCAAAACATGGTACAGTGCCACA +
Preference number: 6 (lower is better)
Translates to: CSIQAVLSFGYR*CSIRKTWYSAT
Trigger: TGTGGCACTGTACCATGTTTTGCGGATGCTGCAGCAGCGATATCCAAAAGACAGCACTGCTTGGATGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp AGGCTTACGTCTGCATGTTGTTCCTTAGCTGGGATTTaGGAGAGAGGTAACTGTACCTCAGTCTGTCCCATC +
Preference number: 6 (lower is better)
Translates to: RLTSACCSLAGI*ERGNCTSVCPI
Trigger: GATGGGACAGACTGAGGTACAGTTACCTCTCTCCCAAATCCCAGCTAAGGAACAACATGCAGACGTAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp ACCATTGGGAATAGACGGATGCTTCCTCCATCTCAATaGGTGCGGCCTCAGTCCCACTTTCATCCTCTAAGA +
Preference number: 6 (lower is better)
Translates to: TIGNRRMLPPSQ*VRPQSHFHPLR
Trigger: TCTTAGAGGATGAAAGTGGGACTGAGGCCGCACCAATTGAGATGGAGGAAGCATCCGTCTATTCCCAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TCAGCTCGGGCTCGTTTCCTGTGTATTCTGGCCCATTaGTGTTCTTCTTGGATGTGTCTCTGCTCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SARARFLCILAH*CSSWMCLCSSV
Trigger: CACAGAAGAGCAGAGACACATCCAAGAAGAACACAAATGGGCCAGAATACACAGGAAACGAGCCCGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp GGTATTTTGGACTCATGGACTGTCTACTTGAGATCCTaGTGTCTTGTGACTCCAGGGCCTGTCTGTGACGGT +
Preference number: 6 (lower is better)
Translates to: GILDSWTVYLRS*CLVTPGPVCDG
Trigger: ACCGTCACAGACAGGCCCTGGAGTCACAAGACACAAGGATCTCAAGTAGACAGTCCATGAGTCCAAAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp GCTGGTAGAACTGTTCCATCCAAGCAGTGCTGTCTTTaGGATATCGCTGCTGCAGCATCCGCAAAACATGGT +
Preference number: 6 (lower is better)
Translates to: AGRTVPSKQCCL*DIAAAASAKHG
Trigger: ACCATGTTTTGCGGATGCTGCAGCAGCGATATCCAAAAGACAGCACTGCTTGGATGGAACAGTTCTACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp TGTATTACTTATAGCTCTTACCCTGCTGTGCCAGAAAAAGAATTCTaGAGACCTGTCCCATTCCAGCTCCCGCTGGGGTGCATGCAGGTT +
Preference number: 6 (lower is better)
Translates to: CITYSSYPAVPEKEF*RPVPFQLPLGCMQV
Trigger: AACCTGCATGCACCCCAGCGGGAGCTGGAATGGGACAGGTCTCAAGAATTCTTTTTCTGGCACAGCAGGGTAAGAGCTATAAGTAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp CCGCAGTTGTACTTTGACCCCATCAAGCACAGCTTCTaGCAGGTGCACATAGTCATCCATTCCATAGGAACA +
Preference number: 6 (lower is better)
Translates to: PQLYFDPIKHSF*QVHIVIHSIGT
Trigger: TGTTCCTATGGAATGGATGACTATGTGCACCTGTCAGAAGCTGTGCTTGATGGGGTCAAAGTACAACTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp CCAAAGTGCATGAATTTTTCTAATCGAGCACAGCTGTaGTGGGAGAGCACTCTTATCACACCACTCTGGTGC +
Preference number: 6 (lower is better)
Translates to: PKCMNFSNRAQL*WESTLITPLWC
Trigger: GCACCAGAGTGGTGTGATAAGAGTGCTCTCCCAGCACAGCTGTGCTCGATTAGAAAAATTCATGCACTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp ATATCGCTGCTGCAGCATCCGCAAAACATGGTACAGTaGCACAAATGTCTCCCACAAAGGCAACTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: ISLLQHPQNMVQ*HKCLPQRQLFL
Trigger: AAGGAAGAGTTGCCTTTGTGGGAGACATTTGTGGCACTGTACCATGTTTTGCGGATGCTGCAGCAGCGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TCCATCCAAGCAGTGCTGTCTTTTGGATATCGCTGCTaGAGCATCCGCAAAACATGGTACAGTGCCACAAAT +
Preference number: 6 (lower is better)
Translates to: SIQAVLSFGYRC*SIRKTWYSATN
Trigger: ATTTGTGGCACTGTACCATGTTTTGCGGATGCTGCAGCAGCGATATCCAAAAGACAGCACTGCTTGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GGATATGAAAGGAGCCTGCATGGACCATGGACTGGATaGGTGGCAATCGTTCAGTCATGGAGAATGTTCTTT +
Preference number: 6 (lower is better)
Translates to: GYERSLHGPWTG*VAIVQSWRMFF
Trigger: AAAGAACATTCTCCATGACTGAACGATTGCCACCCATCCAGTCCATGGTCCATGCAGGCTCCTTTCATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp AAGTGCATGAATTTTTCTAATCGAGCACAGCTGTGCTaGGAGAGCACTCTTATCACACCACTCTGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: KCMNFSNRAQLC*ESTLITPLWCP
Trigger: TGGGCACCAGAGTGGTGTGATAAGAGTGCTCTCCCAGCACAGCTGTGCTCGATTAGAAAAATTCATGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GCATCCAATCTTCCATGTCCTGCAAAGAATAATGCATaGAGGAACGCAGTAACACTGGGCTCCCTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: ASNLPCPAKNNA*RNAVTLGSLPH
Trigger: ATGAGGAAGGGAGCCCAGTGTTACTGCGTTCCTCCATGCATTATTCTTTGCAGGACATGGAAGATTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TGTTTTTGGGTCAGCTGTAAGAGTGAGGTCCTAGAGTaGATTCCAATCTCAGCCATGAGGCTTAGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: CFWVSCKSEVLE*IPISAMRLRVL
Trigger: CAAGACCCTAAGCCTCATGGCTGAGATTGGAATCCACTCTAGGACCTCACTCTTACAGCTGACCCAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CCACTCATCCCAGGCCTTTTTCCAGTCCTGCCAAGATaGTGTCCTCTCAATCATAACCAGTTTTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PLIPGLFPVLPR*CPLNHNQFSFL
Trigger: CAAGAAGGAAAACTGGTTATGATTGAGAGGACACCATCTTGGCAGGACTGGAAAAAGGCCTGGGATGAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp TCTTTTGGATATCGCTGCTGCAGCATCCGCAAAACATaGTACAGTGCCACAAATGTCTCCCACAAAGGCAAC +
Preference number: 6 (lower is better)
Translates to: SFGYRCCSIRKT*YSATNVSHKGN
Trigger: GTTGCCTTTGTGGGAGACATTTGTGGCACTGTACCATGTTTTGCGGATGCTGCAGCAGCGATATCCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp CTGGTAGAACTGTTCCATCCAAGCAGTGCTGTCTTTTaGATATCGCTGCTGCAGCATCCGCAAAACATGGTA +
Preference number: 6 (lower is better)
Translates to: LVELFHPSSAVF*ISLLQHPQNMV
Trigger: TACCATGTTTTGCGGATGCTGCAGCAGCGATATCCAAAAGACAGCACTGCTTGGATGGAACAGTTCTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp TCACTTTCAGGTATTTTGGACTCATGGACTGTCTACTTGAGATCCTaGTGTCTTGTGACTCCAGGGCCTGTCTGTGACGGTACACAATGG +
Preference number: 6 (lower is better)
Translates to: SLSGILDSWTVYLRS*CLVTPGPVCDGTQW
Trigger: CCATTGTGTACCGTCACAGACAGGCCCTGGAGTCACAAGACACAAGGATCTCAAGTAGACAGTCCATGAGTCCAAAATACCTGAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp GAAGAAGTGGGCATCACTGAAGTAATAGCATACACACGGCATATTTaGAGGATAGCGAGACTCTTTGAACAGTACCTGGGACCGGTCACT +
Preference number: 6 (lower is better)
Translates to: EEVGITEVIAYTRHI*RIARLFEQYLGPVT
Trigger: AGTGACCGGTCCCAGGTACTGTTCAAAGAGTCTCGCTATCCTCAAAATATGCCGTGTGTATGCTATTACTTCAGTGATGCCCACTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447313.7
ENST00000473328.1
CDS TCA 72 bp TGGTATGAAAGGCTTAGGGACTTCCAGTACTTCATCTaGTATGCTCATAAAGGAAAGGCGAGTCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: WYERLRDFQYFI*YAHKGKASQQG
Trigger: GCCCTGCTGACTCGCCTTTCCTTTATGAGCATATCAGATGAAGTACTGGAAGTCCCTAAGCCTTTCATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp ATACACACGGCATATTTTGAGGATAGCGAGACTCTTTaGACAGTACCTGGGACCGGTCACTCAGCACAATCA +
Preference number: 6 (lower is better)
Translates to: IHTAYFEDSETL*TVPGTGHSAQS
Trigger: TGATTGTGCTGAGTGACCGGTCCCAGGTACTGTTCAAAGAGTCTCGCTATCCTCAAAATATGCCGTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447313.7
ENST00000473328.1
CDS TCA 72 bp TCACCCAAGAGAGGGAGGCGAAGAAGTGGGCATCACTaGAGTAATAGCATACACACGGCATATTTTGAGGAT +
Preference number: 6 (lower is better)
Translates to: SPKRGRRRSGHH*SNSIHTAYFED
Trigger: ATCCTCAAAATATGCCGTGTGTATGCTATTACTTCAGTGATGCCCACTTCTTCGCCTCCCTCTCTTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447313.7
ENST00000473328.1
CDS TCA 72 bp CTTCATCCATGCTACAGCTTGTATTTCTTTTGTGTTTaGTGTCACCCAAGAGAGGGAGGCGAAGAAGTGGGC +
Preference number: 6 (lower is better)
Translates to: LHPCYSLYFFCV*CHPREGGEEVG
Trigger: GCCCACTTCTTCGCCTCCCTCTCTTGGGTGACATCAAACACAAAAGAAATACAAGCTGTAGCATGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447313.7
CDS GCA 72 bp ACCTGTTTCCACTCATCCCAGGCCTTTTTCCAGTCCTaGCAAGATGGTGTCCTCTCAATCATAACCAGTTTT +
Preference number: 6 (lower is better)
Translates to: TCFHSSQAFFQS*QDGVLSIITSF
Trigger: AAAACTGGTTATGATTGAGAGGACACCATCTTGGCAGGACTGGAAAAAGGCCTGGGATGAGTGGAAACAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GAGGCAAAGATTTGCCCTAGTGCACCAACACAGCACTaGTACTTCAGCAAGGAAGCATGGACCATAATATTG +
Preference number: 6 (lower is better)
Translates to: EAKICPSAPTQH*YFSKEAWTIIL
Trigger: CAATATTATGGTCCATGCTTCCTTGCTGAAGTACCAGTGCTGTGTTGGTGCACTAGGGCAAATCTTTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp ATCTGCTGCTGCATCTCCCGAAAAGTCTCTTGTTTTTaGGTCAGCTGTAAGAGTGAGGTCCTAGAGTGGATT +
Preference number: 6 (lower is better)
Translates to: ICCCISRKVSCF*VSCKSEVLEWI
Trigger: AATCCACTCTAGGACCTCACTCTTACAGCTGACCCAAAAACAAGAGACTTTTCGGGAGATGCAGCAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp CACTTCCTTGTGTCTGATCACCTCTTGGGTCACACCTaGTATCATGTCCTCTCTAATTGCTCCTTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: HFLVSDHLLGHT*YHVLSNCSFLD
Trigger: ATCCAGGAAGGAGCAATTAGAGAGGACATGATACAAGGTGTGACCCAAGAGGTGATCAGACACAAGGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TCGTTTCCTGTGTATTCTGGCCCATTTGTGTTCTTCTaGGATGTGTCTCTGCTCTTCTGTGACCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: SFPVYSGPFVFF*DVSLLFCDLLF
Trigger: GAACAGCAGGTCACAGAAGAGCAGAGACACATCCAAGAAGAACACAAATGGGCCAGAATACACAGGAAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TCACTTTCAGGTATTTTGGACTCATGGACTGTCTACTaGAGATCCTTGTGTCTTGTGACTCCAGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: SLSGILDSWTVY*RSLCLVTPGPV
Trigger: GACAGGCCCTGGAGTCACAAGACACAAGGATCTCAAGTAGACAGTCCATGAGTCCAAAATACCTGAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp CCTTGGCATCACTTCCTTGTGTCTGATCACCTCTTGGGTCACACCTaGTATCATGTCCTCTCTAATTGCTCCTTCCTGGATAAAAATTGG +
Preference number: 6 (lower is better)
Translates to: PWHHFLVSDHLLGHT*YHVLSNCSFLDKNW
Trigger: CCAATTTTTATCCAGGAAGGAGCAATTAGAGAGGACATGATACAAGGTGTGACCCAAGAGGTGATCAGACACAAGGAAGTGATGCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp CCTGGGTATTTCAACTACTGTGGCCTTTTTATCTTCCCAGGATATTaGTTTCTCCGGCACTGGCACTGGTGTTTTCTCTTTCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: PGYFNYCGLFIFPGY*FLRHWHWCFLFHLQ
Trigger: CTGGAGATGAAAGAGAAAACACCAGTGCCAGTGCCGGAGAAACAAATATCCTGGGAAGATAAAAAGGCCACAGTAGTTGAAATACCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp ATCCTCCTTTGTCAATCTGGGCTAACAGTTATATGGGCATGGCTCTaGGAGAATGGGCCAAGAAGGGTAAGAAAGGCAGTCTTACTTGTA +
Preference number: 6 (lower is better)
Translates to: ILLCQSGLTVIWAWL*ENGPRRVRKAVLLV
Trigger: TACAAGTAAGACTGCCTTTCTTACCCTTCTTGGCCCATTCTCCAAGAGCCATGCCCATATAACTGTTAGCCCAGATTGACAAAGGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS CAA 90 bp GATTTCTGGTTCCAGACCACATTCATCCATGGGGAATATCCTCCTTaGTCAATCTGGGCTAACAGTTATATGGGCATGGCTCTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: DFWFQTTFIHGEYPP*SIWANSYMGMALGE
Trigger: TTCTCCAAGAGCCATGCCCATATAACTGTTAGCCCAGATTGACAAAGGAGGATATTCCCCATGGATGAATGTGGTCTGGAACCAGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS CCA 72 bp AATTGCTCCTTCCTGGATAAAAATTGGTTTCTTCTCTaGCGGGACTACATCCCAATCAAGGTCCTCAAGCAG +
Preference number: 6 (lower is better)
Translates to: NCSFLDKNWFLL*RDYIPIKVLKQ
Trigger: CTGCTTGAGGACCTTGATTGGGATGTAGTCCCGCCAGAGAAGAAACCAATTTTTATCCAGGAAGGAGCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp AATATCCTCCTTTGTCAATCTGGGCTAACAGTTATATaGGCATGGCTCTTGGAGAATGGGCCAAGAAGGGTA +
Preference number: 6 (lower is better)
Translates to: NILLCQSGLTVI*AWLLENGPRRV
Trigger: TACCCTTCTTGGCCCATTCTCCAAGAGCCATGCCCATATAACTGTTAGCCCAGATTGACAAAGGAGGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS CAA 72 bp GAGTGGATTCCAATCTCAGCCATGAGGCTTAGGGTCTaGATCCTCACTCTTTCATCCTTGTCCATTAATCCT +
Preference number: 6 (lower is better)
Translates to: EWIPISAMRLRV*ILTLSSLSINP
Trigger: AGGATTAATGGACAAGGATGAAAGAGTGAGGATCAAGACCCTAAGCCTCATGGCTGAGATTGGAATCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp TCTTCATCCATGCTACAGCTTGTATTTCTTTTGTGTTaGATGTCACCCAAGAGAGGGAGGCGAAGAAGTGGG +
Preference number: 6 (lower is better)
Translates to: SSSMLQLVFLLC*MSPKRGRRRSG
Trigger: CCCACTTCTTCGCCTCCCTCTCTTGGGTGACATCAAACACAAAAGAAATACAAGCTGTAGCATGGATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447313.7
CDS CAA 72 bp TTCCAGACCACATTCATCCATGGGGAATATCCTCCTTaGTCAATCTGGGCTAACAGTTATATGGGCATGGCT +
Preference number: 6 (lower is better)
Translates to: FQTTFIHGEYPP*SIWANSYMGMA
Trigger: AGCCATGCCCATATAACTGTTAGCCCAGATTGACAAAGGAGGATATTCCCCATGGATGAATGTGGTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS CAA 90 bp CAGTTTAGGAAACCTGCGTTTATCCTTAAAATCCCAGAAGTCCTTTaGAAACATCAGTGCCAGGGTTTGTTTTTCCACAGAGGCATGGGC +
Preference number: 6 (lower is better)
Translates to: QFRKPAFILKIPEVL*KHQCQGLFFHRGMG
Trigger: GCCCATGCCTCTGTGGAAAAACAAACCCTGGCACTGATGTTTCAAAAGGACTTCTGGGATTTTAAGGATAAACGCAGGTTTCCTAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp CCTCCTTCCTCTTCATCATCCAGTATGACTTCTGAATaGTTTCTGGCCAATTTGCTCTCTTCCTCAGTCATT +
Preference number: 6 (lower is better)
Translates to: PPSSSSSSMTSE*FLANLLSSSVI
Trigger: AATGACTGAGGAAGAGAGCAAATTGGCCAGAAAGCATTCAGAAGTCATACTGGATGATGAAGAGGAAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GCACCAACACAGCACTGGTACTTCAGCAAGGAAGCATaGACCATAATATTGAGCATTGTCTCAATCATGCTA +
Preference number: 6 (lower is better)
Translates to: APTQHWYFSKEA*TIILSIVSIML
Trigger: TAGCATGATTGAGACAATGCTCAATATTATGGTCCATGCTTCCTTGCTGAAGTACCAGTGCTGTGTTGGTGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp GGCATCACTGAAGTAATAGCATACACACGGCATATTTaGAGGATAGCGAGACTCTTTGAACAGTACCTGGGA +
Preference number: 6 (lower is better)
Translates to: GITEVIAYTRHI*RIARLFEQYLG
Trigger: TCCCAGGTACTGTTCAAAGAGTCTCGCTATCCTCAAAATATGCCGTGTGTATGCTATTACTTCAGTGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447313.7
ENST00000473328.1
CDS CAA 72 bp GTAAGAAAGGCAGTCTTACTTGTATTTCTTTTGTGTTaGATGTCACCCAAGAGAGGGAGGCGAAGAAGTGGG +
Preference number: 6 (lower is better)
Translates to: VRKAVLLVFLLC*MSPKRGRRRSG
Trigger: CCCACTTCTTCGCCTCCCTCTCTTGGGTGACATCAAACACAAAAGAAATACAAGTAAGACTGCCTTTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473328.1
CDS TCA 72 bp TATTCCTCCTTCCTCTTCATCATCCAGTATGACTTCTaGATGCTTTCTGGCCAATTTGCTCTCTTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: YSSFLFIIQYDF*MLSGQFALFLS
Trigger: ACTGAGGAAGAGAGCAAATTGGCCAGAAAGCATTCAGAAGTCATACTGGATGATGAAGAGGAAGGAGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp TTTAGAACTCCTAGTCTTATAGCCCTGCCTTTGCCATaGGGAACTCCTCTTAAAATGGAAAGGACTCTTTCC +
Preference number: 6 (lower is better)
Translates to: FRTPSLIALPLP*GTPLKMERTLS
Trigger: GGAAAGAGTCCTTTCCATTTTAAGAGGAGTTCCTCATGGCAAAGGCAGGGCTATAAGACTAGGAGTTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp GTTCTTTGTGAGTTCTTCCATGCTGTTGATCCATCTTTCCCTTTTTaGGGCCAGTTTCATCTTCTTCTCAATCAATTGCTCCCTTTTCCG +
Preference number: 6 (lower is better)
Translates to: VLCEFFHAVDPSFPF*GQFHLLLNQLLPFP
Trigger: CGGAAAAGGGAGCAATTGATTGAGAAGAAGATGAAACTGGCCCAAAAAAGGGAAAGATGGATCAACAGCATGGAAGAACTCACAAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp GAGAATCAACATCTTTTGAGAGCTTTATTACACTGGTaGTTGAAGACCATTGGGAATAGACGGATGCTTCCT +
Preference number: 6 (lower is better)
Translates to: ENQHLLRALLHW*LKTIGNRRMLP
Trigger: AGGAAGCATCCGTCTATTCCCAATGGTCTTCAAGCACCAGTGTAATAAAGCTCTCAAAAGATGTTGATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TTTGTCACGTATTTTCTGCAGCCTCTTCAGGGTCAATaGAATGTGATCCTTCGAGATATCTTTCTCTTGAGA +
Preference number: 6 (lower is better)
Translates to: FVTYFLQPLQGQ*NVILRDIFLLR
Trigger: TCTCAAGAGAAAGATATCTCGAAGGATCACATTGCATTGACCCTGAAGAGGCTGCAGAAAATACGTGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS GCA 72 bp TCCTCCAAAGTCACTTCTTCCTCATCCTTGTACTGTTaGTCCTTGGACTTAGATGATAACATATTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SSKVTSSSSLYC*SLDLDDNIFSQ
Trigger: CTGGGAAAATATGTTATCATCTAAGTCCAAGGAGCAACAGTACAAGGATGAGGAAGAAGTGACTTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CCA 72 bp GATAAAAGTATTGCATTTCCATCTCCTTGTGAGCAATaGATATCTGCTGTGCCCTCTCACTTCTGTAAGGTT +
Preference number: 6 (lower is better)
Translates to: DKSIAFPSPCEQ*ISAVPSHFCKV
Trigger: AACCTTACAGAAGTGAGAGGGCACAGCAGATATCCATTGCTCACAAGGAGATGGAAATGCAATACTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp AATCAACATCTTTTGAGAGCTTTATTACACTGGTGCTaGAAGACCATTGGGAATAGACGGATGCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: NQHLLRALLHWC*KTIGNRRMLPP
Trigger: TGGAGGAAGCATCCGTCTATTCCCAATGGTCTTCAAGCACCAGTGTAATAAAGCTCTCAAAAGATGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp TCTCTTGAGAATCAACATCTTTTGAGAGCTTTATTACACTGGTGCTaGAAGACCATTGGGAATAGACGGATGCTTCCTCCATCTCAATTG +
Preference number: 6 (lower is better)
Translates to: SLENQHLLRALLHWC*KTIGNRRMLPPSQL
Trigger: CAATTGAGATGGAGGAAGCATCCGTCTATTCCCAATGGTCTTCAAGCACCAGTGTAATAAAGCTCTCAAAAGATGTTGATTCTCAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp CCAACACAGCACTGGTACTTCAGCAAGGAAGCATGGACCATAATATaGAGCATTGTCTCAATCATGCTATTAATGGTTATTTCACTCATC +
Preference number: 6 (lower is better)
Translates to: PTQHWYFSKEAWTII*SIVSIMLLMVISLI
Trigger: GATGAGTGAAATAACCATTAATAGCATGATTGAGACAATGCTCAATATTATGGTCCATGCTTCCTTGCTGAAGTACCAGTGCTGTGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS TCA 72 bp GTGTCAGCTTCTCCTCTACCTGAGCCAGTATCTTGTTaGACATTCCCAATTTGTTCTTTACTTGCACTAATT +
Preference number: 6 (lower is better)
Translates to: VSASPLPEPVSC*TFPICSLLALI
Trigger: AATTAGTGCAAGTAAAGAACAAATTGGGAATGTTCAACAAGATACTGGCTCAGGTAGAGGAGAAGCTGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp ACTTGGAAAAATGTCTCTGGTGGCAGGATAAAAGTATaGCATTTCCATCTCCTTGTGAGCAATGGATATCTG +
Preference number: 6 (lower is better)
Translates to: TWKNVSGGRIKV*HFHLLVSNGYL
Trigger: CAGATATCCATTGCTCACAAGGAGATGGAAATGCAATACTTTTATCCTGCCACCAGAGACATTTTTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 72 bp AAACCTGCGTTTATCCTTAAAATCCCAGAAGTCCTTTaGAAACATCAGTGCCAGGGTTTGTTTTTCCACAGA +
Preference number: 6 (lower is better)
Translates to: KPAFILKIPEVL*KHQCQGLFFHR
Trigger: TCTGTGGAAAAACAAACCCTGGCACTGATGTTTCAAAAGGACTTCTGGGATTTTAAGGATAAACGCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp TCATCTTTAGTCAGTTCTGATCGTTTTTCAGAAAAATCCCACTCTTaGATATCCAGCTTACTCTGTTCTATACTCAACCTGCGCTCCTTA +
Preference number: 6 (lower is better)
Translates to: SSLVSSDRFSEKSHS*ISSLLCSILNLRSL
Trigger: TAAGGAGCGCAGGTTGAGTATAGAACAGAGTAAGCTGGATATCAAAGAGTGGGATTTTTCTGAAAAACGATCAGAACTGACTAAAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7
CDS CAA 90 bp CAATGTGATCCTTCGAGATATCTTTCTCTTGAGAATCAACATCTTTaGAGAGCTTTATTACACTGGTGCTTGAAGACCATTGGGAATAGA +
Preference number: 6 (lower is better)
Translates to: QCDPSRYLSLENQHL*RALLHWCLKTIGNR
Trigger: TCTATTCCCAATGGTCTTCAAGCACCAGTGTAATAAAGCTCTCAAAAGATGTTGATTCTCAAGAGAAAGATATCTCGAAGGATCACATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303868.5
ENST00000447313.7