RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR83 (Homo sapiens)

Ensembl gene IDs: ENSG00000123154

Ensembl transcript IDs: ENST00000418543.8, ENST00000425834.7, ENST00000546754.5, ENST00000547255.5, ENST00000547481.5, ENST00000547797.1, ENST00000548381.5, ENST00000550939.5, ENST00000551329.1, ENST00000552700.1, ENST00000553179.5

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACTGGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTaGGTGGTAGGCCAGCGACTGCACCACACCGGAACCCACAGGCAG +
Preference number: 1 (lower is better)
Translates to: ALDAASHGGQQAGLC*VVGQRLHHTGTHRQ
Trigger: CTGCCTGTGGGTTCCGGTGTGGTGCAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCCAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR TCA 90 bp TTTGGAGGACCCTGCGTGGCCCCGGAATTTGCGCACGACCTGCCCTaGTGCCACATCCCACAGAACCACCGCCTTGTCCCCGCCGCCGGA +
Preference number: 1 (lower is better)
Translates to: FGGPCVAPEFAHDLP*CHIPQNHRLVPAAG
Trigger: TCCGGCGGCGGGGACAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGTCCTCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR TCA 90 bp GTTCACCTTCCCTGCGTGGCCCCGGAATTTGCGCACGACCTGCCCTaGTGCCACATCCCACAGAACCACCGCCTTGTCCCCGCCGCCGGA +
Preference number: 1 (lower is better)
Translates to: VHLPCVAPEFAHDLP*CHIPQNHRLVPAAG
Trigger: TCCGGCGGCGGGGACAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGAAGGTGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR GCA 90 bp CTCCATCCTCTGCCTCATAGGCCTCCTCTCGCCAGCACTGGACGCTaGCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGG +
Preference number: 1 (lower is better)
Translates to: LHPLPHRPPLASTGR*LPWRSAGRALLGGR
Trigger: CCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCCAGTGCTGGCGAGAGGAGGCCTATGAGGCAGAGGATGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR GCA 90 bp TGGACTTTGGAGGACCCTGCGTGGCCCCGGAATTTGCGCACGACCTaGCCTGATGCCACATCCCACAGAACCACCGCCTTGTCCCCGCCG +
Preference number: 1 (lower is better)
Translates to: WTLEDPAWPRNLRTT*PDATSHRTTALSPP
Trigger: CGGCGGGGACAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGTCCTCCAAAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR GCA 90 bp ACCGTGTTCACCTTCCCTGCGTGGCCCCGGAATTTGCGCACGACCTaGCCTGATGCCACATCCCACAGAACCACCGCCTTGTCCCCGCCG +
Preference number: 1 (lower is better)
Translates to: TVFTFPAWPRNLRTT*PDATSHRTTALSPP
Trigger: CGGCGGGGACAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGAAGGTGAACACGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR GCA 90 bp GTGTCTCGGTCCTTGGTCCTGTTGGTGGGTCCCCTGGCTTCAGCCTaGTCCATCCTCTGCCTCATAGGCCTCCTCTCGCCAGCACTGGAC +
Preference number: 1 (lower is better)
Translates to: VSRSLVLLVGPLASA*SILCLIGLLSPALD
Trigger: GTCCAGTGCTGGCGAGAGGAGGCCTATGAGGCAGAGGATGGAGCAGGCTGAAGCCAGGGGACCCACCAACAGGACCAAGGACCGAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR CCA 90 bp CCAGGATCTCGTGGTCTGACACCTTCACACTGGACACGCCATCTCTaGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTGAGCGGC +
Preference number: 1 (lower is better)
Translates to: PGSRGLTPSHWTRHL*PHPASALAQASVSG
Trigger: GCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR GCA 90 bp GACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTaGACTGGCTCAGGCCTCCGTGAGCGGCAATCCCAACAGCGGATA +
Preference number: 1 (lower is better)
Translates to: DTFTLDTPSLASSSV*TGSGLRERQSQQRI
Trigger: TATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR CCA 90 bp CATCCACGGAGCCTGCCAGGATCTCGTGGTCTGACACCTTCACACTaGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAG +
Preference number: 1 (lower is better)
Translates to: HPRSLPGSRGLTPSH*TRHLWPHPASALAQ
Trigger: CTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGGCTCCGTGGATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR TCA 90 bp GCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCGGATACTGGAATCAATAGAGCCGGA +
Preference number: 1 (lower is better)
Translates to: AISGLIQRLHWLRPP*AAIPTADTGINRAG
Trigger: TCCGGCTCTATTGATTCCAGTATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR TCA 90 bp CCTCCACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTaGCCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGT +
Preference number: 1 (lower is better)
Translates to: PPPGPRRTPSRPQNS*PHVCHARSGSSPAC
Trigger: ACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR CCA 90 bp CGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCGATGTGGAGTCCAGGCTaGACACCAGGGTGCACTGCC +
Preference number: 2 (lower is better)
Translates to: RCLPWRSAGRALLGGRPAMWSPG*TPGCTA
Trigger: GGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACAT...CGCTGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR GCA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCACCCCTGGCTTCAGCCTaGTCCATCCTCTGCCTCATA +
Preference number: 2 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPPLASA*SILCLI
Trigger: TATGAGGCAGAGGATGGAGCAGGCTGAAGCCAGGGG...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR GCA 90 bp AGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGCCTCATCCAGCGTCTaGACTGGCTCAGGCCTCCGT +
Preference number: 2 (lower is better)
Translates to: RLDTRVHCPSRLKQVQVMASSSV*TGSGLR
Trigger: ACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGC...CATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR CCA 90 bp AGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGTTGGAGGACCCTGCGTaGCCCCGGAATTTGCGCACG +
Preference number: 2 (lower is better)
Translates to: RLDTRVHCPSRLKQVQVMLEDPA*PRNLRT
Trigger: CGTGCGCAAATTCCGGGGCCACGCAGGGTCCTCCAA...CATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR-3UTR TCA 90 bp TGTGGAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: CGVQAGHQGALPIPAEAGAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...ACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR TCA 90 bp TCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: SPSSSPVSLSRSRNVESRAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...CCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR TCA 90 bp GCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: AQQLPCVFVQEPQCGVQAAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...AGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR GCA 90 bp CAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGAGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: QQLPCVFVQEPQCGVQAGDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...TCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR GCA 90 bp ACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: TPSHWTRHLWPHPASALADTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...AGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR GCA 90 bp ACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATG +
Preference number: 2 (lower is better)
Translates to: TPSHWTRHLWPHPASALARGPGI*ARPALM
Trigger: CATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACG...AGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR GCA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGACTTTGGAGGACCCTaGGTGGCCCCGGAATTTGCG +
Preference number: 2 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCDFGGP*VAPEFA
Trigger: CGCAAATTCCGGGGCCACGCAGGGTCCTCCAAAGTC...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR-3UTR GCA 90 bp GCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACGTGTTCACCTTCCCTaGGTGGCCCCGGAATTTGCG +
Preference number: 2 (lower is better)
Translates to: AAPLCLCPGAAMWSPGWTRVHLP*VAPEFA
Trigger: CGCAAATTCCGGGGCCACGCAGGGAAGGTGAACACG...TGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR-3UTR CCA 90 bp CTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGATGTGGAGTCCAGGCTaGACACCAGGGTGCACTGCC +
Preference number: 2 (lower is better)
Translates to: LPCVFVQEPQCGVQAGHQMWSPG*TPGCTA
Trigger: GGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACAT...CTGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR CCA 90 bp GCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCACCAGGAGCCGCAATGTaGAGTCCAGGCTGGACACCA +
Preference number: 2 (lower is better)
Translates to: APLCLCPGAAMWSPGWTPPGAAM*SPGWTP
Trigger: TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGG...TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR CCA 90 bp TTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCCCAGGAGCCGCAATGTaGAGTCCAGGCTGGACACCA +
Preference number: 2 (lower is better)
Translates to: LWPLYSPSSSPVSLSRSRPGAAM*SPGWTP
Trigger: TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGG...GCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
3UTR-3UTR CCA 90 bp TCTGACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGAGGAGGCTGGACTTTaGAGGACCCTGCGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SDTFTLDTPSLASSSVCTEEAGL*RTLRGP
Trigger: GGGGCCACGCAGGGTCCTCCAAAGTCCAGCCTCCTC...AGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR CAA 90 bp TGGTTCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGGGTG +
Preference number: 2 (lower is better)
Translates to: WFLWPLYSPSSSPVS*SRSRNVESRLDTRV
Trigger: CACCCTGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
3UTR-3UTR TCA 90 bp TGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: CTRPAAPLCLCPGAAMWSAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...ACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR GCA 90 bp AGAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTAGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: RTADHMCVTLAQAAVQLVDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...TACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR GCA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTAATTTGCGCACGACCTaGCCTGATGCCACATCCCAC +
Preference number: 2 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCNLRTT*PDATSH
Trigger: GTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATT...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR GCA 90 bp CACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCACATGTGTCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATG +
Preference number: 2 (lower is better)
Translates to: HQVPEEHLPVLRTADHMCRGPGI*ARPALM
Trigger: CATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACG...ACACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR CAA 90 bp CAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTaGTATTCCTGGTTCTTATGGCCCTTGTACTCGCCCAGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: QLTTCVSRSLRQQSS*YSWFLWPLYSPSSS
Trigger: GGAGCTGCTGGGCGAGTACAAGGGCCATAAGAACCAGGAATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR CCA 90 bp TCCACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCACATGTATGTGGAGTCCAGGCTaGACACCAGGGTGCACTGCC +
Preference number: 2 (lower is better)
Translates to: STRSQKNTFPSSEQLTTCMWSPG*TPGCTA
Trigger: GGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACAT...ACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR CCA 90 bp TCCACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCACATGTGGTCCTTGGTCCTGTTaGTGGGTCCCCTGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: STRSQKNTFPSSEQLTTCGPWSC*WVPWLQ
Trigger: CTGAAGCCAGGGGACCCACCAACAGGACCAAGGACC...ACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR TCA 90 bp CCAGGATCTCGTGGTCTGACACCTTCACACTGGACACGCCATCTCTGGCCTCATCGTCCTCAGAACAGCTaGCCACATGTGTGTCACGCT +
Preference number: 2 (lower is better)
Translates to: PGSRGLTPSHWTRHLWPHRPQNS*PHVCHA
Trigger: AGCGTGACACACATGTGGTCAGCTGTTCTGAGGACG...ATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR-3UTR TCA 90 bp GAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATCAGGATCTCGTGGTCTaGCACCTTCACACTGGACAC +
Preference number: 2 (lower is better)
Translates to: EQLTTCVSRSLRQQSSLYQDLVV*HLHTGH
Trigger: GTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTG...ATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR-3UTR TCA 90 bp GAATCAATAGAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTGCACCGTGGCGCACGACCTGCCCTaGTGCCACATCCCACAGAAC +
Preference number: 2 (lower is better)
Translates to: ESIEPDRITVASSLNCTVAHDLP*CHIPQN
Trigger: GTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGC...CACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTCTATTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR TCA 90 bp TCAATAGAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTGCACCGTGTTCGCGCACGACCTGCCCTaGTGCCACATCCCACAGAAC +
Preference number: 2 (lower is better)
Translates to: SIEPDRITVASSLNCTVFAHDLP*CHIPQN
Trigger: GTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGC...GAACACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTCTATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR TCA 90 bp GCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAACCGTGTTCACCTTCTaGGAAAGTTATTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: APLCLCPGAAMWSPGWTPTVFTF*ESYCHS
Trigger: TGAGTGGCAATAACTTTCTCAGAAGGTGAACACGGT...TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR-3UTR GCA 90 bp GGAATCAATAGAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTGCACCGTGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GINRAGQDNCGLFIKLHRDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...ACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTCTATTGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR GCA 90 bp GGAATCAATAGAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTGCACCGTAATTTGCGCACGACCTaGCCTGATGCCACATCCCAC +
Preference number: 2 (lower is better)
Translates to: GINRAGQDNCGLFIKLHRNLRTT*PDATSH
Trigger: GTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATT...ACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTCTATTGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR CCA 90 bp GAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATTCCAGCTTGTATTCCTaGTTCTTATGGCCCTTGTAC +
Preference number: 2 (lower is better)
Translates to: EQLTTCVSRSLRQQSSLYSSLYS*FLWPLY
Trigger: GTACAAGGGCCATAAGAACCAGGAATACAAGCTGGA...ATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR CCA 72 bp GCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTaGGTGGTAGGCCAGCGACTGCACCACACCGGAACC +
Preference number: 3 (lower is better)
Translates to: AASHGGQQAGLC*VVGQRLHHTGT
Trigger: GGTTCCGGTGTGGTGCAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR CAA 90 bp CTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTGAGCGGCAATCCCGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGAT +
Preference number: 3 (lower is better)
Translates to: LWPHPASALAQASVSGNPAWPRN*RTTCPD
Trigger: ATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGC...GGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR GCA 72 bp CTGCCTCATAGGCCTCCTCTCGCCAGCACTGGACGCTaGCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTG +
Preference number: 3 (lower is better)
Translates to: LPHRPPLASTGR*LPWRSAGRALL
Trigger: CAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCCAGTGCTGGCGAGAGGAGGCCTATGAGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR CAA 90 bp CGCACCCTCCACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCACAGAACCACCGCCTaGTCCCCGCCGCCGGAGCAG +
Preference number: 3 (lower is better)
Translates to: RTLHQVPEEHLPVLRTADHRTTA*SPPPEQ
Trigger: CTGCTCCGGCGGCGGGGACAAGGCGGTGGTTCTGTG...GTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTGGAGGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR GCA 72 bp GAGGACCCTGCGTGGCCCCGGAATTTGCGCACGACCTaGCCTGATGCCACATCCCACAGAACCACCGCCTTG +
Preference number: 3 (lower is better)
Translates to: EDPAWPRNLRTT*PDATSHRTTAL
Trigger: CAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR-3UTR CAA 90 bp TGGGGCTGCCCACGTAGTCTGAGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCCACAGAACCACCGCCTaGTCCCCGCCGCCGGAGCAG +
Preference number: 3 (lower is better)
Translates to: WGCPRSLRRAAPSLGHSVHRTTA*SPPPEQ
Trigger: CTGCTCCGGCGGCGGGGACAAGGCGGTGGTTCTGTG...GACGCTATGACCTAAGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR TCA 72 bp GCGGCCATCCACGGAGCCTGCCAGGATCTCGTGGTCTaGCACCTTCACACTGGACACGCCATCTCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: AAIHGACQDLVV*HLHTGHAISGL
Trigger: GAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGGCTCCGTGGATGGCCGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR GCA 72 bp ACCTTCCCTGCGTGGCCCCGGAATTTGCGCACGACCTaGCCTGATGCCACATCCCACAGAACCACCGCCTTG +
Preference number: 3 (lower is better)
Translates to: TFPAWPRNLRTT*PDATSHRTTAL
Trigger: CAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR GCA 72 bp GCTGGACTTTGGAGGACCCTGCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATGCCACATCCCACAGAA +
Preference number: 3 (lower is better)
Translates to: AGLWRTLRGPGI*ARPALMPHPTE
Trigger: TTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGTCCTCCAAAGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR CCA 72 bp CGTGGTCTGACACCTTCACACTGGACACGCCATCTCTaGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: RGLTPSHWTRHL*PHPASALAQAS
Trigger: GGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR CCA 72 bp CTCACGCGGCCATCCACGGAGCCTGCCAGGATCTCGTaGTCTGACACCTTCACACTGGACACGCCATCTCTG +
Preference number: 3 (lower is better)
Translates to: LTRPSTEPARIS*SDTFTLDTPSL
Trigger: CAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGGCTCCGTGGATGGCCGCGTGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR CAA 90 bp GGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCGACTGCACCACACCAGGCAGCAGTCCAGCTaGTATTCCTGGTTCTTATGG +
Preference number: 3 (lower is better)
Translates to: GGQQAGLCWVVGQRLHHTRQQSS*YSWFLW
Trigger: CCATAAGAACCAGGAATACAAGCTGGACTGCTGCCT...GGTGTGGTGCAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR-3UTR CAA 90 bp AGGATCTCGTGGTCTGACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGAT +
Preference number: 3 (lower is better)
Translates to: RISWSDTFTLDTPSLASSAWPRN*RTTCPD
Trigger: ATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGC...GGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR-3UTR CAA 90 bp GACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCTTCTGAGAAAGTTATaGCCACTCAGAGGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: DTRVHCPSRLKQVQVMGLLLRKL*PLRGGW
Trigger: CCAGCCTCCTCTGAGTGGCAATAACTTTCTCAGAAG...CAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR TCA 72 bp GGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCGGATACTGGAATCAAT +
Preference number: 3 (lower is better)
Translates to: GLIQRLHWLRPP*AAIPTADTGIN
Trigger: ATTGATTCCAGTATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR CCA 72 bp AGCCTGCCAGGATCTCGTGGTCTGACACCTTCACACTaGACACGCCATCTCTGGCCTCATCCAGCGTCTGCA +
Preference number: 3 (lower is better)
Translates to: SLPGSRGLTPSH*TRHLWPHPASA
Trigger: TGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR TCA 72 bp GGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTaGCCACATGTGTGTCACGCTCGCTCAGGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: GPRRTPSRPQNS*PHVCHARSGSS
Trigger: ACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR CCA 72 bp TCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATTCCTaGTTCTTATGGCCCTTGTACTCGCCCAGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SRSLRQQSSLYS*FLWPLYSPSSS
Trigger: GGAGCTGCTGGGCGAGTACAAGGGCCATAAGAACCAGGAATACAAGCTGGACTGCTGCCTGAGCGAGCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
3UTR-3UTR CAA 90 bp AGAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTAAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTG +
Preference number: 3 (lower is better)
Translates to: RTADHMCVTLAQAAVQLVSSPVS*SRSRNV
Trigger: CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT...TACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR GCA 72 bp GAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTaGACCGTGTTCACCTTCCCTGCGTGGCCCCGGAAT +
Preference number: 3 (lower is better)
Translates to: EPDRITVASSLN*TVFTFPAWPRN
Trigger: ATTCCGGGGCCACGCAGGGAAGGTGAACACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
3UTR CCA 72 bp CACCTTCTGAGAAAGTTATTGCCACTCAGAGGAGGCTaGACTTTGGAGGACCCTGCGTGGCCCCGGAATTTG +
Preference number: 3 (lower is better)
Translates to: HLLRKLLPLRGG*TLEDPAWPRNL
Trigger: CAAATTCCGGGGCCACGCAGGGTCCTCCAAAGTCCAGCCTCCTCTGAGTGGCAATAACTTTCTCAGAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
3UTR-3UTR CAA 90 bp GAATCAATAGAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTGCACCGTGAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTG +
Preference number: 3 (lower is better)
Translates to: ESIEPDRITVASSLNCTVSSPVS*SRSRNV
Trigger: CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT...CACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTCTATTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
3UTR CCA 72 bp CCCTACTTTTTGGTCAGCTACGTCTCTAGAATAAGATaGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTC +
Preference number: 3 (lower is better)
Translates to: PYFLVSYVSRIR*YLKSFHVCVSV
Trigger: GACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATTCTAGAGACGTAGCTGACCAAAAAGTAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp ACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCCCGGACGCTGCCTCCCATaGCGGTCAGCAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TRVHCPSRLKQVQVMGLPGRCLP*RSAGRA
Trigger: AGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC...GGGCAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCCAGCACTGGACGCTaGCTCCCATGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPASTGR*LPWRSA
Trigger: TGCTGACCGCCATGGGAGGCAGCGTCCAGTGCTGGC...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp CACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCCGAGGAGGCTGGACTTTaGAGGACCCTGCGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HQGALPIPAEAGAGDGAAEEAGL*RTLRGP
Trigger: GGGGCCACGCAGGGTCCTCCAAAGTCCAGCCTCCTC...GGCAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR GCA 90 bp GGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCGACTGCACCACACCAACGACCCCCGGGATTaGCCAGGGCTACAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGQQAGLCWVVGQRLHHTNDPRD*PGLQPL
Trigger: GAGAGGCTGTAGCCCTGGGCAATCCCGGGGGTCGTT...GGTGTGGTGCAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR CCA 90 bp TGTGGAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTCCACGGAGCCCTGCGTaGCCCCGGAATTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: CGVQAGHQGALPIPAEAGPRSPA*PRNLRT
Trigger: CGTGCGCAAATTCCGGGGCCACGCAGGGCTCCGTGG...ACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425834.7
CDS-3UTR TCA 90 bp ACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCCCGCCCAACCAGTGCCCTaGGGGTGGCATTTTCCTACC +
Preference number: 4 (lower is better)
Translates to: TRVHCPSRLKQVQVMGLPAQPVP*GWHFPT
Trigger: GGTAGGAAAATGCCACCCTCAGGGCACTGGTTGGGC...GGGCAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp GACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGGCGCACGACCTGCCCTaGTGCCACATCCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: DTRVHCPSRLKQVQVMGLAHDLP*CHIPQN
Trigger: GTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGC...CAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp AGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGTCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RAAPSLGHSVSRGHPRSLSYGSH*PLPAVQ
Trigger: CTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGA...CAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATG +
Preference number: 4 (lower is better)
Translates to: ESRLDTRVHCPSRLKQVQRGPGI*ARPALM
Trigger: CATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACG...CTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp CTGGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCTTCACCTTCCCTGCGTaGCCCCGGAATTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: LDAASHGGQQAGLCWVVGFTFPA*PRNLRT
Trigger: CGTGCGCAAATTCCGGGGCCACGCAGGGAAGGTGAA...GCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR TCA 90 bp TCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCG +
Preference number: 4 (lower is better)
Translates to: SHWTRHLWPHPASALAQAWLRPP*AAIPTA
Trigger: CGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCA...GGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTCTTCAACCGTTTCTaGGGCAGCTCTGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ESRLDTRVHCPSRLKQVQVFNRF*GSSGGR
Trigger: GCGGCCTCCAGAGCTGCCGCAGAAACGGTTGAAGAC...CTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp CCTGCCAGGATCTCGTGGTCTGACACCTTCACACTGGACACGCCATCTCTGGCCTCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PARISWSDTFTLDTPSLASYGSH*PLPAVQ
Trigger: CTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGA...GGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp TGGAGGACCCTGCGTGGCCCCGGAATTTGCGCACGACCTGCCCTGATGCCACATGCCTCATCCAGCGTCTaGACTGGCTCAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: WRTLRGPGICARPALMPHASSSV*TGSGLR
Trigger: ACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGC...ATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR CCA 90 bp GACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGTTCACCTTCCCTGCGTaGCCCCGGAATTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: DTRVHCPSRLKQVQVMGLFTFPA*PRNLRT
Trigger: CGTGCGCAAATTCCGGGGCCACGCAGGGAAGGTGAA...CAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp GACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGATGTGGAGTCCAGGCTaGACACCAGGGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: DTRVHCPSRLKQVQVMGLMWSPG*TPGCTA
Trigger: GGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACAT...CAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp GAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGATGTGGAGTCCAGGCTaGACACCAGGGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: ESRLDTRVHCPSRLKQVQMWSPG*TPGCTA
Trigger: GGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACAT...CTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp GAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGCCAGGAGCCGCAATGTaGAGTCCAGGCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: ESRLDTRVHCPSRLKQVQPGAAM*SPGWTP
Trigger: TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGG...CTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp TGTGGAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTCAGGCAGGGCTCTGTTaGGTGGTAGGCCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: CGVQAGHQGALPIPAEAGQAGLC*VVGQRL
Trigger: CAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTG...ACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp TGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGGACGCTGCCTCCCATaGCGGTCAGCAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: WPLYSPSSSPVSLSRSRNGRCLP*RSAGRA
Trigger: AGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC...ATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR CAA 72 bp GGCTGGACTTTGGAGGACCCTGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGATGCCACATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GWTLEDPAWPRN*RTTCPDATSHR
Trigger: TCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGTCCTCCAAAGTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR TCA 90 bp CCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGGGGCGCACGACCTGCCCTaGTGCCACATCCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: PLCLCPGAAMWSPGWTPGAHDLP*CHIPQN
Trigger: GTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGC...CCCTGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp CAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGATGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCG +
Preference number: 4 (lower is better)
Translates to: QQLPCVFVQEPQCGVQAGWLRPP*AAIPTA
Trigger: CGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCA...TCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp CCCGTCCTCAGAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCTGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCG +
Preference number: 4 (lower is better)
Translates to: PVLRTADHMCVTLAQAAVWLRPP*AAIPTA
Trigger: CGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCA...GACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTCTGAGGACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR TCA 90 bp AGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: RLDTRVHCPSRLKQVQVMAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...CATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp CACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCCCGTCCTCAGAACAGCTaGCCACATGTGTGTCACGCT +
Preference number: 4 (lower is better)
Translates to: HQGALPIPAEAGAGDGAARPQNS*PHVCHA
Trigger: AGCGTGACACACATGTGGTCAGCTGTTCTGAGGACG...GGCAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAAATTTGCGCACGACCTaGCCTGATGCCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPNLRTT*PDATSH
Trigger: GTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATT...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp AGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RAAPSLGHSVSRGHPRSLDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...CAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp TACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCGCCAGCACTGGACGCTaGCTCCCATGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: YSPSSSPVSLSRSRNVESASTGR*LPWRSA
Trigger: TGCTGACCGCCATGGGAGGCAGCGTCCAGTGCTGGC...GGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp CAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACCATCCACGGAGCCCTaGGTGGCCCCGGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: QQLPCVFVQEPQCGVQAGPSTEP*VAPEFA
Trigger: CGCAAATTCCGGGGCCACGCAGGGCTCCGTGGATGG...TCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425834.7
CDS-3UTR CCA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCACCTGCCAGGATCTCGTaGTCTGACACCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPPARIS*SDTFTL
Trigger: CAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGG...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR TCA 90 bp AGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGCGGTCTTTCCCTAGCTaGAGTGGTGTGCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: RLDTRVHCPSRLKQVQVMRSFPS*SGVLGS
Trigger: CGACCCAAGCACACCACTTCAGCTAGGGAAAGACCG...CATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp CTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATG +
Preference number: 4 (lower is better)
Translates to: LPCVFVQEPQCGVQAGHQRGPGI*ARPALM
Trigger: CATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACG...CTGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp ATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAAGCCTCATCCAGCGTCTaGACTGGCTCAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: MALVLAQQLPCVFVQEPQASSSV*TGSGLR
Trigger: ACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGC...TTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR GCA 90 bp AGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSPVSLSRSRNVESRLDTDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...GGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp CCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PLYSPSSSPVSLSRSRNVDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp TGTGGAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTCCCCTGGCTTCAGCCTaGTCCATCCTCTGCCTCATA +
Preference number: 4 (lower is better)
Translates to: CGVQAGHQGALPIPAEAGPLASA*SILCLI
Trigger: TATGAGGCAGAGGATGGAGCAGGCTGAAGCCAGGGG...ACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp TCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTGGAGGCCGCGGCTTTaGCTCAGGGAAAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SHWTRHLWPHPASALAQAWRPRL*LRESHA
Trigger: AGCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCA...GGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp ACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCCAGGAGCCGCAATGTaGAGTCCAGGCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: TLDTPSLASSSVCTGSGLPGAAM*SPGWTP
Trigger: TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGG...GAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp CGCACCCTCCACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCAGGCAGGGCTCTGTTaGGTGGTAGGCCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: RTLHQVPEEHLPVLRTADQAGLC*VVGQRL
Trigger: CAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTG...GTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTGGAGGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
3UTR CAA 72 bp TGCACCGTGTTCACCTTCCCTGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGATGCCACATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: CTVFTFPAWPRN*RTTCPDATSHR
Trigger: TCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGAAGGTGAACACGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR TCA 90 bp TGTGGAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTCAGGATCTCGTGGTCTaGCACCTTCACACTGGACAC +
Preference number: 4 (lower is better)
Translates to: CGVQAGHQGALPIPAEAGQDLVV*HLHTGH
Trigger: GTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTG...ACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGTGGGTCGCTGTCTACTaGTCCTTCATCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: AGHQGALPIPAEAGAGDGWVAVY*SFISFA
Trigger: GGCAAAGCTGATGAAGGAGCAGTAGACAGCGACCCA...CCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGTCAGCGTCTTGTCACTaGCGCACGTCAGGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ESRLDTRVHCPSRLKQVQSASCH*RTSGSN
Trigger: ATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGA...CTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp TGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATG +
Preference number: 4 (lower is better)
Translates to: CTRPAAPLCLCPGAAMWSRGPGI*ARPALM
Trigger: CATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACG...ACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp AGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCGTGTTCACCTTCCCTaGGTGGCCCCGGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: RRAAPSLGHSVSRGHPRSRVHLP*VAPEFA
Trigger: CGCAAATTCCGGGGCCACGCAGGGAAGGTGAACACG...GCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR GCA 90 bp GCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGACTTTGGAGGACCCTaGGTGGCCCCGGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: APLCLCPGAAMWSPGWTPDFGGP*VAPEFA
Trigger: CGCAAATTCCGGGGCCACGCAGGGTCCTCCAAAGTC...TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR CCA 90 bp ATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGGAGGCCGCGGCTTTaGCTCAGGGAAAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: MALVLAQQLPCVFVQEPQWRPRL*LRESHA
Trigger: AGCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCA...TTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp GGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGACACGCCATCTCTaGCCTCATCCAGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GPCTRPAAPLCLCPGAAMWTRHL*PHPASA
Trigger: TGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCA...CATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp TACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCCCAGGAGCCGCAATGTaGAGTCCAGGCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: YSPSSSPVSLSRSRNVESPGAAM*SPGWTP
Trigger: TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGG...GGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTCCAGGAGCCGCAATGTaGAGTCCAGGCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCPGAAM*SPGWTP
Trigger: TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGG...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp TTCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCTCCTCTCGCCAGCACTaGACGCTGCCTCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: FLWPLYSPSSSPVSLSRSSSRQH*TLPPMA
Trigger: CGCCATGGGAGGCAGCGTCCAGTGCTGGCGAGAGGA...GCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTCCTTGGTCCTGTTGGTaGGTCCCCTGGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCPWSCW*VPWLQP
Trigger: AGGCTGAAGCCAGGGGACCCACCAACAGGACCAAGG...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp CCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGCTGTGTCTCGGTCCTTaGTCCTGTTGGTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLYSPSSSPVSLSRSRNVLCLGP*SCWWVP
Trigger: GGGGACCCACCAACAGGACCAAGGACCGAGACACAG...CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp TGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATCGGTCTTTCCCTAGCTaGAGTGGTGTGCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: WPLYSPSSSPVSLSRSRNRSFPS*SGVLGS
Trigger: CGACCCAAGCACACCACTTCAGCTAGGGAAAGACCG...ATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR TCA 90 bp TCTGACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGCGCACGACCTGCCCTaGTGCCACATCCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: SDTFTLDTPSLASSSVCTAHDLP*CHIPQN
Trigger: GTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGC...AGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp TGGGGCTGCCCACGTAGTCTGAGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: WGCPRSLRRAAPSLGHSVAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...GACGCTATGACCTAAGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp ACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTCCTCAGAACAGCTaGCCACATGTGTGTCACGCT +
Preference number: 4 (lower is better)
Translates to: TLDTPSLASSSVCTGSGLRPQNS*PHVCHA
Trigger: AGCGTGACACACATGTGGTCAGCTGTTCTGAGGACG...GAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR GCA 90 bp TGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTGAGCGGCAATCCCAACTGGGTCGCTGTCTACTaGTCCTTCATCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: WPHPASALAQASVSGNPNWVAVY*SFISFA
Trigger: GGCAAAGCTGATGAAGGAGCAGTAGACAGCGACCCA...GTTGGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp CACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCCCCAGGACTCCTTCCTTaGAGCCTTAAATCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: HQGALPIPAEAGAGDGAAPGLLP*SLKSVF
Trigger: AAAGACCGATTTAAGGCTGCAAGGAAGGAGTCCTGG...GGCAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp ACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCCCCCAGGACTCCTTCCTTaGAGCCTTAAATCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TRVHCPSRLKQVQVMGLPPGLLP*SLKSVF
Trigger: AAAGACCGATTTAAGGCTGCAAGGAAGGAGTCCTGG...GGGCAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp TTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGGTCTTCAACCGTTTCTaGGGCAGCTCTGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LYSPSSSPVSLSRSRNVEVFNRF*GSSGGR
Trigger: GCGGCCTCCAGAGCTGCCGCAGAAACGGTTGAAGAC...CTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp CCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGGGAATTTGCGCACGACCTaGCCTGATGCCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: PLCLCPGAAMWSPGWTPGNLRTT*PDATSH
Trigger: GTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATT...CCCTGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATTCCTGGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ADHMCVTLAQAAVQLVFLDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...CAGGAATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAAGAGGCATTCCGTCTTaGAATTCCGGCATTAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPRGIPS*NSGIKR
Trigger: CCTCTTAATGCCGGAATTCCAAGACGGAATGCCTCT...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR CCA 90 bp TCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGAAGTGGTGTGCTTaGGTCGCTGTCTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSSSPVSLSRSRNVESRLKWCA*VAVYCS
Trigger: GGAGCAGTAGACAGCGACCCAAGCACACCACTTCAG...CCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp CTGAGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGTGGACACGCCATCTCTaGCCTCATCCAGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LRRAAPSLGHSVSRGHPRWTRHL*PHPASA
Trigger: TGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCA...CCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCTTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp TCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCCTGCCAGGATCTCGTaGTCTGACACCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: SPSSSPVSLSRSRNVESRPARIS*SDTFTL
Trigger: CAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGG...CCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp TCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCATGTGGAGTCCAGGCTaGACACCAGGGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SYGPCTRPAAPLCLCPGAMWSPG*TPGCTA
Trigger: GGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACAT...GGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp GACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGTATTCCTGGTTCTTATaGCCCTTGTACTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DTRVHCPSRLKQVQVMGLYSWFL*PLYSPS
Trigger: GCTGGGCGAGTACAAGGGCCATAAGAACCAGGAATA...CAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp GAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATTCCTCTCGCCAGCACTaGACGCTGCCTCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: EQLTTCVSRSLRQQSSLYSSRQH*TLPPMA
Trigger: CGCCATGGGAGGCAGCGTCCAGTGCTGGCGAGAGGA...ATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp TGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTGGTCCTTGGTCCTGTTaGTGGGTCCCCTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CTRPAAPLCLCPGAAMWSGPWSC*WVPWLQ
Trigger: CTGAAGCCAGGGGACCCACCAACAGGACCAAGGACC...ACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp TCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCCTGTGTCTCGGTCCTTaGTCCTGTTGGTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SYGPCTRPAAPLCLCPGALCLGP*SCWWVP
Trigger: GGGGACCCACCAACAGGACCAAGGACCGAGACACAG...GGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp AGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCCGTCTTCATAGCCCGTaGGACGCCAGTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SSPVSLSRSRNVESRLDTRLHSP*DASVTF
Trigger: AAAGGTGACACTGGCGTCTCACGGGCTATGAAGACG...GGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTCGTCTTCATAGCCCGTaGGACGCCAGTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCRLHSP*DASVTF
Trigger: AAAGGTGACACTGGCGTCTCACGGGCTATGAAGACG...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp TCCACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCACATGTGCGCACGACCTGCCCTaGTGCCACATCCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: STRSQKNTFPSSEQLTTCAHDLP*CHIPQN
Trigger: GTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGC...ACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp AGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCCAGGATCTCGTGGTCTaGCACCTTCACACTGGACAC +
Preference number: 4 (lower is better)
Translates to: SSPVSLSRSRNVESRLDTQDLVV*HLHTGH
Trigger: GTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTG...GGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp AGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACCAGGATCTCGTGGTCTaGCACCTTCACACTGGACAC +
Preference number: 4 (lower is better)
Translates to: SSSPVSLSRSRNVESRLDQDLVV*HLHTGH
Trigger: GTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTG...GTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTCTCCTTCATCAGCTTTaGCAACTCTCGGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: AQQLPCVFVQEPQCGVQALLHQL*QLSELG
Trigger: TCCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAG...AGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATG +
Preference number: 4 (lower is better)
Translates to: EQLTTCVSRSLRQQSSLYRGPGI*ARPALM
Trigger: CATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACG...ATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp GCTGACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATTCCTGCGTGTTCACCTTCCCTaGGTGGCCCCGGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: ADHMCVTLAQAAVQLVFLRVHLP*VAPEFA
Trigger: CGCAAATTCCGGGGCCACGCAGGGAAGGTGAACACG...CAGGAATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR GCA 90 bp AACACCTTCCCGTCCTCAGAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGGCCTGCTCCATCCTCTaGCTCATAGGCCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: NTFPSSEQLTTCVSRSLRACSIL*LIGLLS
Trigger: CGAGAGGAGGCCTATGAGGCAGAGGATGGAGCAGGC...CCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp CCTGGTTCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGCCTGCTCCATCCTCTaGCTCATAGGCCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PGSYGPCTRPAAPLCLCPACSIL*LIGLLS
Trigger: CGAGAGGAGGCCTATGAGGCAGAGGATGGAGCAGGC...TGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp TGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCCCTGGCTTCAGCCTaGTCCATCCTCTGCCTCATA +
Preference number: 4 (lower is better)
Translates to: CTRPAAPLCLCPGAAMWSPLASA*SILCLI
Trigger: TATGAGGCAGAGGATGGAGCAGGCTGAAGCCAGGGG...ACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp CCTGCCAGGATCTCGTGGTCTGACACCTTCACACTGGACACGCCATCTCTGGCCCTGACACCTTCACACTaGACACGCCATCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PARISWSDTFTLDTPSLALTPSH*TRHLWP
Trigger: AGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAG...GGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp CCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGCCTGCCAGGATCTCGTaGTCTGACACCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: PLYSPSSSPVSLSRSRNVPARIS*SDTFTL
Trigger: CAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGG...CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp TCAGGCCTCCGTGAGCGGCAATCCCAACAGCGGATACTGGAATCAATAGAGCCGGGTCCTTGGTCCTGTTaGTGGGTCCCCTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGLRERQSQQRILESIEPGPWSC*WVPWLQ
Trigger: CTGAAGCCAGGGGACCCACCAACAGGACCAAGGACC...CGGCTCTATTGATTCCAGTATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR GCA 90 bp TGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATCTAGCTGAAGTGGTGTaGTTGGGTCGCTGTCTACTG +
Preference number: 4 (lower is better)
Translates to: WPLYSPSSSPVSLSRSRNLAEVV*LGRCLL
Trigger: CAGTAGACAGCGACCCAAGCACACCACTTCAGCTAG...ATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR GCA 90 bp CCTGCCAGGATCTCGTGGTCTGACACCTTCACACTGGACACGCCATCTCTGGCCCTAGCTGAAGTGGTGTaGTTGGGTCGCTGTCTACTG +
Preference number: 4 (lower is better)
Translates to: PARISWSDTFTLDTPSLALAEVV*LGRCLL
Trigger: CAGTAGACAGCGACCCAAGCACACCACTTCAGCTAG...GGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp CCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGTCAGCGTCTTGTCACTaGCGCACGTCAGGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: PLYSPSSSPVSLSRSRNVSASCH*RTSGSN
Trigger: ATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGA...CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp CCACGTAGTCTGAGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCAATTTGCGCACGACCTaGCCTGATGCCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: PRSLRRAAPSLGHSVSRGNLRTT*PDATSH
Trigger: GTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATT...GCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCTTCTCAGACTACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp GGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCGACTGCACCACACCTTCTATTTATTAATTTaGAGACCCAGCCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GGQQAGLCWVVGQRLHHTFYLLI*RPSPSP
Trigger: AGGGGAGGGGCTGGGTCTGCAAATTAATAAATAGAA...GGTGTGGTGCAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp TCTGACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTTGGACACGCCATCTCTaGCCTCATCCAGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SDTFTLDTPSLASSSVCTWTRHL*PHPASA
Trigger: TGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCA...AGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp TCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCCTGACACCTTCACACTaGACACGCCATCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SYGPCTRPAAPLCLCPGALTPSH*TRHLWP
Trigger: AGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAG...GGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp AGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGTATTCCTGGTTCTTATaGCCCTTGTACTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RAAPSLGHSVSRGHPRSLYSWFL*PLYSPS
Trigger: GCTGGGCGAGTACAAGGGCCATAAGAACCAGGAATA...CAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp CACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCACATGTGTCCTTGGTCCTGTTGGTaGGTCCCCTGGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HQVPEEHLPVLRTADHMCPWSCW*VPWLQP
Trigger: AGGCTGAAGCCAGGGGACCCACCAACAGGACCAAGG...ACACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp GAATCAATAGAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTGCACCGTGTCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ESIEPDRITVASSLNCTVSYGSH*PLPAVQ
Trigger: CTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGA...CACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTCTATTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp TTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCAGCGTCTTGTCACTaGCGCACGTCAGGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LYSPSSSPVSLSRSRNVESASCH*RTSGSN
Trigger: ATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGA...CTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp GCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACATATTCCTGGTTCTTATaGCCCTTGTACTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAPLCLCPGAAMWSPGWTYSWFL*PLYSPS
Trigger: GCTGGGCGAGTACAAGGGCCATAAGAACCAGGAATA...TGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCSYGSH*PLPAVQ
Trigger: CTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp ATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAAGCCTCTTCATTAAACTaGACCGTGTTCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: MALVLAQQLPCVFVQEPQASSLN*TVFTFP
Trigger: AGGGAAGGTGAACACGGTGCAGTTTAATGAAGAGGC...TTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR GCA 90 bp GCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGCCATTCTATTTATTAATTTaGAGACCCAGCCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AAPSLGHSVSRGHPRSLPFYLLI*RPSPSP
Trigger: AGGGGAGGGGCTGGGTCTGCAAATTAATAAATAGAA...TGGCAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR CCA 90 bp GCGGCAATCCCAACAGCGGATACTGGAATCAATAGAGCCGGACAGGATAACTGTTGGAGGCCGCGGCTTTaGCTCAGGGAAAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: AAIPTADTGINRAGQDNCWRPRL*LRESHA
Trigger: AGCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCA...ACAGTTATCCTGTCCGGCTCTATTGATTCCAGTATCCGCTGTTGGGATTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp AGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGTCCAGCTTGTATTCCTaGTTCTTATGGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: RAAPSLGHSVSRGHPRSLSSLYS*FLWPLY
Trigger: GTACAAGGGCCATAAGAACCAGGAATACAAGCTGGA...CAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGGACGCTGCCTCCCATaGCGGTCAGCAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCGRCLP*RSAGRA
Trigger: AGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp CTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGCCCTCCCCTACTTTTTaGTCAGCTACGTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LPCVFVQEPQCGVQAGHQPSPTF*SATSLE
Trigger: TTCTAGAGACGTAGCTGACCAAAAAGTAGGGGAGGG...CTGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp ATAGAGCCGGACAGGATAACTGTGGCCTCTTCATTAAACTGCACCGTGTTCACCTTGGAGGACCCTGCGTaGCCCCGGAATTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: IEPDRITVASSLNCTVFTLEDPA*PRNLRT
Trigger: CGTGCGCAAATTCCGGGGCCACGCAGGGTCCTCCAA...GGTGAACACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGGCTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR TCA 90 bp CCACGTAGTCTGAGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCATGAGTAGCTTCATGTaGGACTTGCCCGGCATTAAG +
Preference number: 4 (lower is better)
Translates to: PRSLRRAAPSLGHSVSRGMSSFM*DLPGIK
Trigger: CTTAATGCCGGGCAAGTCTCACATGAAGCTACTCAT...GCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCTTCTCAGACTACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCWLRPP*AAIPTA
Trigger: CGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR TCA 90 bp AGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCGTGTTCACCTTCTaGGAAAGTTATTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: SSSPVSLSRSRNVESRLDTVFTF*ESYCHS
Trigger: TGAGTGGCAATAACTTTCTCAGAAGGTGAACACGGT...GTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR GCA 90 bp TTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGGCCTCTTCATTAAACTaGACCGTGTTCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LYSPSSSPVSLSRSRNVEASSLN*TVFTFP
Trigger: AGGGAAGGTGAACACGGTGCAGTTTAATGAAGAGGC...CTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCCAGCACTGGACGCTaGCTCCCATGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCASTGR*LPWRSA
Trigger: TGCTGACCGCCATGGGAGGCAGCGTCCAGTGCTGGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp CGCACCCTCCACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACTCCAGCTTGTATTCCTaGTTCTTATGGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: RTLHQVPEEHLPVLRTADSSLYS*FLWPLY
Trigger: GTACAAGGGCCATAAGAACCAGGAATACAAGCTGGA...GTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTGGAGGGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTCCTCTCGCCAGCACTaGACGCTGCCTCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCSSRQH*TLPPMA
Trigger: CGCCATGGGAGGCAGCGTCCAGTGCTGGCGAGAGGA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp TCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCCCCTCCCCTACTTTTTaGTCAGCTACGTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SYGPCTRPAAPLCLCPGAPSPTF*SATSLE
Trigger: TTCTAGAGACGTAGCTGACCAAAAAGTAGGGGAGGG...GGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCGCACGACCTGCCCTaGTGCCACATCCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCAHDLP*CHIPQN
Trigger: GTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTAACGACCCCCGGGATTaGCCAGGGCTACAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCNDPRD*PGLQPL
Trigger: GAGAGGCTGTAGCCCTGGGCAATCCCGGGGGTCGTT...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRGPGI*ARPALM
Trigger: CATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCCTCATCCAGCGTCTaGACTGGCTCAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCASSSV*TGSGLR
Trigger: ACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGACACCAGGGTGCACTaGCCATCCCGGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCDTRVH*PSRLKQ
Trigger: CTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp TCTGACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTAGAGGCATTCCGTCTTaGAATTCCGGCATTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SDTFTLDTPSLASSSVCTRGIPS*NSGIKR
Trigger: CCTCTTAATGCCGGAATTCCAAGACGGAATGCCTCT...AGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCAGGCAGGGCTCTGTTaGGTGGTAGGCCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCQAGLC*VVGQRL
Trigger: CAGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCCCAACCAGTGCCCTaGGGGTGGCATTTTCCTACC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCAQPVP*GWHFPT
Trigger: GGTAGGAAAATGCCACCCTCAGGGCACTGGTTGGGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCTGCCCACGTAGTCTaGGAAGAGCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCAAHVV*EELPHP
Trigger: AGGATGGGGCAGCTCTTCTCAGACTACGTGGGCAGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp GCGGCAATCCCAACAGCGGATACTGGAATCAATAGAGCCGGACAGGATAACTGTCTCCTTCATCAGCTTTaGCAACTCTCGGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: AAIPTADTGINRAGQDNCLLHQL*QLSELG
Trigger: TCCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAG...ACAGTTATCCTGTCCGGCTCTATTGATTCCAGTATCCGCTGTTGGGATTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGTCTTCAACCGTTTCTaGGGCAGCTCTGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCVFNRF*GSSGGR
Trigger: GCGGCCTCCAGAGCTGCCGCAGAAACGGTTGAAGAC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCGTGTTCACCTTCCCTaGGTGGCCCCGGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRVHLP*VAPEFA
Trigger: CGCAAATTCCGGGGCCACGCAGGGAAGGTGAACACG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCCTGCTCCATCCTCTaGCTCATAGGCCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCACSIL*LIGLLS
Trigger: CGAGAGGAGGCCTATGAGGCAGAGGATGGAGCAGGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTGGAGGCCGCGGCTTTaGCTCAGGGAAAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCWRPRL*LRESHA
Trigger: AGCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTTCACCTTCCCTGCGTaGCCCCGGAATTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCFTFPA*PRNLRT
Trigger: CGTGCGCAAATTCCGGGGCCACGCAGGGAAGGTGAA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTATGTGGAGTCCAGGCTaGACACCAGGGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCMWSPG*TPGCTA
Trigger: GGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACAT...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCCAGGAGCCGCAATGTaGAGTCCAGGCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCPGAAM*SPGWTP
Trigger: TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCCTTGGTCCTGTTGGTaGGTCCCCTGGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCPWSCW*VPWLQP
Trigger: AGGCTGAAGCCAGGGGACCCACCAACAGGACCAAGG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGGTCCTTGGTCCTGTTaGTGGGTCCCCTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCGPWSC*WVPWLQ
Trigger: CTGAAGCCAGGGGACCCACCAACAGGACCAAGGACC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCTGTGTCTCGGTCCTTaGTCCTGTTGGTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCLCLGP*SCWWVP
Trigger: GGGGACCCACCAACAGGACCAAGGACCGAGACACAG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCGGTCTTTCCCTAGCTaGAGTGGTGTGCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRSFPS*SGVLGS
Trigger: CGACCCAAGCACACCACTTCAGCTAGGGAAAGACCG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCCCCTGGCTTCAGCCTaGTCCATCCTCTGCCTCATA +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCPLASA*SILCLI
Trigger: TATGAGGCAGAGGATGGAGCAGGCTGAAGCCAGGGG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTGGACACGCCATCTCTaGCCTCATCCAGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCWTRHL*PHPASA
Trigger: TGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp CCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATTCCTGGTTCTTCCAGCTTGTATTCCTaGTTCTTATGGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PHVCHARSGSSPACIPGSSSLYS*FLWPLY
Trigger: GTACAAGGGCCATAAGAACCAGGAATACAAGCTGGA...AGAACCAGGAATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCGTCTTCATAGCCCGTaGGACGCCAGTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRLHSP*DASVTF
Trigger: AAAGGTGACACTGGCGTCTCACGGGCTATGAAGACG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR TCA 90 bp ACTGCACCGTGTTCACCTTCTGAGAAAGTTATTGCCACTCAGAGGAGGCTGGACATGAGTAGCTTCATGTaGGACTTGCCCGGCATTAAG +
Preference number: 4 (lower is better)
Translates to: TAPCSPSEKVIATQRRLDMSSFM*DLPGIK
Trigger: CTTAATGCCGGGCAAGTCTCACATGAAGCTACTCAT...GTCCAGCCTCCTCTGAGTGGCAATAACTTTCTCAGAAGGTGAACACGGTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCAGGATCTCGTGGTCTaGCACCTTCACACTGGACAC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCQDLVV*HLHTGH
Trigger: GTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCGTCCTCAGAACAGCTaGCCACATGTGTGTCACGCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRPQNS*PHVCHA
Trigger: AGCGTGACACACATGTGGTCAGCTGTTCTGAGGACG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTAATTTGCGCACGACCTaGCCTGATGCCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCNLRTT*PDATSH
Trigger: GTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATT...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCTGAAGTGGTGTGCTTaGGTCGCTGTCTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCLKWCA*VAVYCS
Trigger: GGAGCAGTAGACAGCGACCCAAGCACACCACTTCAG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCTGACACCTTCACACTaGACACGCCATCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCLTPSH*TRHLWP
Trigger: AGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCCTGCCAGGATCTCGTaGTCTGACACCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCPARIS*SDTFTL
Trigger: CAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCTCCTTCATCAGCTTTaGCAACTCTCGGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCLLHQL*QLSELG
Trigger: TCCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTGGGTCGCTGTCTACTaGTCCTTCATCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCWVAVY*SFISFA
Trigger: GGCAAAGCTGATGAAGGAGCAGTAGACAGCGACCCA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCTAGCTGAAGTGGTGTaGTTGGGTCGCTGTCTACTG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCLAEVV*LGRCLL
Trigger: CAGTAGACAGCGACCCAAGCACACCACTTCAGCTAG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTCAGCGTCTTGTCACTaGCGCACGTCAGGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCSASCH*RTSGSN
Trigger: ATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTATTCCTGGTTCTTATaGCCCTTGTACTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCYSWFL*PLYSPS
Trigger: GCTGGGCGAGTACAAGGGCCATAAGAACCAGGAATA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR TCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTATGAGTAGCTTCATGTaGGACTTGCCCGGCATTAAG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCMSSFM*DLPGIK
Trigger: CTTAATGCCGGGCAAGTCTCACATGAAGCTACTCAT...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCCAGGACTCCTTCCTTaGAGCCTTAAATCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCPGLLP*SLKSVF
Trigger: AAAGACCGATTTAAGGCTGCAAGGAAGGAGTCCTGG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCCTCTTCATTAAACTaGACCGTGTTCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCASSLN*TVFTFP
Trigger: AGGGAAGGTGAACACGGTGCAGTTTAATGAAGAGGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTAGAGGCATTCCGTCTTaGAATTCCGGCATTAAGAGG +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRGIPS*NSGIKR
Trigger: CCTCTTAATGCCGGAATTCCAAGACGGAATGCCTCT...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCCCTCCCCTACTTTTTaGTCAGCTACGTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCPSPTF*SATSLE
Trigger: TTCTAGAGACGTAGCTGACCAAAAAGTAGGGGAGGG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTCCAGCTTGTATTCCTaGTTCTTATGGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCSSLYS*FLWPLY
Trigger: GTACAAGGGCCATAAGAACCAGGAATACAAGCTGGA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR GCA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTTTCTATTTATTAATTTaGAGACCCAGCCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCFYLLI*RPSPSP
Trigger: AGGGGAGGGGCTGGGTCTGCAAATTAATAAATAGAA...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS GCA 90 bp GGCCATCCACGGAGCCCTGCGTGGCCCCGGAATTTGCGCACGACCTaGCCTGATGCCACATCCCACAGAACCACCGCCTTGTCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: GHPRSPAWPRNLRTT*PDATSHRTTALSPP
Trigger: CGGCGGGGACAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGCTCCGTGGATGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000547255.5
CDS-3UTR CAA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGAT +
Preference number: 5 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPAWPRN*RTTCPD
Trigger: ATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGC...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS GCA 90 bp GCTCGCACTGCCCCCTGCCCGCAGTCCAGCGTCTTCAACCGTTTCTaGGGCAGCTCTGGAGGCCGCGGCTTTGGCTCAGGGAAAGCCATG +
Preference number: 5 (lower is better)
Translates to: ARTAPCPQSSVFNRF*GSSGGRGFGSGKAM
Trigger: CATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCAGAGCTGCCGCAGAAACGGTTGAAGACGCTGGACTGCGGGCAGGGGGCAGTGCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000547255.5
ENST00000547481.5
ENST00000548381.5
ENST00000550939.5
ENST00000551329.1
ENST00000553179.5
CDS-3UTR CAA 90 bp GAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGCAGGCAGGGCTCTGTaGGGTGGTAGGCCAGCGACT +
Preference number: 5 (lower is better)
Translates to: ESRLDTRVHCPSRLKQVQAGRAL*GGRPAT
Trigger: AGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGC...CTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp GCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCACACAGAACCACCGCCTaGTCCCCGCCGCCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: APLCLCPGAAMWSPGWTPHRTTA*SPPPEQ
Trigger: CTGCTCCGGCGGCGGGGACAAGGCGGTGGTTCTGTG...TGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTCACAGAACCACCGCCTaGTCCCCGCCGCCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCHRTTA*SPPPEQ
Trigger: CTGCTCCGGCGGCGGGGACAAGGCGGTGGTTCTGTG...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS GCA 90 bp CCTGAGGGTGGCATTTTCCTACCTTCCTGTAACGACCCCCGGGATTaGCCAGGGCTACAGCCTCTCTCCCGTGAGCCTCCAGACCGCGCC +
Preference number: 5 (lower is better)
Translates to: PEGGIFLPSCNDPRD*PGLQPLSREPPDRA
Trigger: GGCGCGGTCTGGAGGCTCACGGGAGAGAGGCTGTAGCCCTGGGCAATCCCGGGGGTCGTTACAGGAAGGTAGGAAAATGCCACCCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546754.5
CDS-3UTR CAA 90 bp GGACGCTGCCTCCCATGGCGGTCAGCAGGCAGGGCTCTGTTGGGTGGTAGGCCAGCTGAAGTGGTGTGCTaGGGTCGCTGTCTACTGCTC +
Preference number: 5 (lower is better)
Translates to: GRCLPWRSAGRALLGGRPAEVVC*GRCLLL
Trigger: GAGCAGTAGACAGCGACCCAAGCACACCACTTCAGC...TGGCCTACCACCCAACAGAGCCCTGCCTGCTGACCGCCATGGGAGGCAGCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR CAA 90 bp TCTTATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCCACAGAACCACCGCCTaGTCCCCGCCGCCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SYGPCTRPAAPLCLCPGAHRTTA*SPPPEQ
Trigger: CTGCTCCGGCGGCGGGGACAAGGCGGTGGTTCTGTG...GGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCATAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CAA 90 bp ACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGGGGCTGCCCAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTG +
Preference number: 5 (lower is better)
Translates to: TRVHCPSRLKQVQVMGLPSSPVS*SRSRNV
Trigger: CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT...GGGCAGCCCCATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp AGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCAGGTGATGCGGTCCTTGGTCCTGTaGGTGGGTCCCCTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RLDTRVHCPSRLKQVQVMRSLVL*VGPLAS
Trigger: TGAAGCCAGGGGACCCACCAACAGGACCAAGGACCG...CATCACCTGCACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp AGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGAGAGGAGGCTGGACTTaGGAGGACCCTGCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: RAAPSLGHSVSRGHPRSLRGGWT*EDPAWP
Trigger: GGGCCACGCAGGGTCCTCCAAAGTCCAGCCTCCTCT...CAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS GCA 90 bp CCAGCGGGAACCTTGACTACACTCACATGGCTCCAGGCAGCCCTGTaGCTTCCCAGCCCAGTGGGCCTGCTCTTCCAGTGCACAGGAGTG +
Preference number: 5 (lower is better)
Translates to: PAGTLTTLTWLQAAL*LPSPVGLLFQCTGV
Trigger: CACTCCTGTGCACTGGAAGAGCAGGCCCACTGGGCTGGGAAGGCACAGGGCTGCCTGGAGCCATGTGAGTGTAGTCAAGGTTCCCGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552700.1
CDS-3UTR CAA 90 bp ATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAACTGGAGGCCGCGGCTTaGGCTCAGGGAAAGCCATGC +
Preference number: 5 (lower is better)
Translates to: MALVLAQQLPCVFVQEPQLEAAA*AQGKPC
Trigger: GCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCAG...TTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CAA 90 bp AGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGAT +
Preference number: 5 (lower is better)
Translates to: SSPVSLSRSRNVESRLDTAWPRN*RTTCPD
Trigger: ATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGC...GGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS TCA 90 bp GCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCGGATACGGACAGGATAACTGTGGCC +
Preference number: 5 (lower is better)
Translates to: AISGLIQRLHWLRPP*AAIPTADTDRITVA
Trigger: GGCCACAGTTATCCTGTCCGTATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547481.5
CDS GCA 90 bp GCAGCGTCCCCCGAAGCGGGTTCCACAGCTTCAGCGTCTTGTCACTaGCGCACGTCAGGCAGTAATTGCCATCCACTGGGGAACACCAGG +
Preference number: 5 (lower is better)
Translates to: AASPEAGSTASASCH*RTSGSNCHPLGNTR
Trigger: CCTGGTGTTCCCCAGTGGATGGCAATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGAAGCTGTGGAACCCGCTTCGGGGGACGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS CCA 90 bp ACCACGCCCTGCCTGCCAGGATCTCGTGGTCTGACACCTTCACACTaGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TTPCLPGSRGLTPSH*TRHLWPHPASALAQ
Trigger: CTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGGCAGGGCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547797.1
CDS CCA 90 bp CAGCGTCTTGTCACTGCCGCACGTCAGGCAGTAATTGCCATCCACTaGGGAACACCAGGCGGGGGTTACTGGGCCGTCGATCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QRLVTAARQAVIAIH*GTPGGGYWAVDLRR
Trigger: CCTCCTGAGATCGACGGCCCAGTAACCCCCGCCTGGTGTTCCCCAGTGGATGGCAATTACTGCCTGACGTGCGGCAGTGACAAGACGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS-3UTR CAA 90 bp TGTGGAGTCCAGGCTGGACACCAGGGTGCACTGCCCATCCCGGCTGAAGCAGGTGCTCCTTCATCAGCTTaGCCAACTCTCGGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: CGVQAGHQGALPIPAEAGAPSSA*PTLGAR
Trigger: CCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAGC...ACCTGCTTCAGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp CCACGTAGTCTGAGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCTGGAGGCCGCGGCTTaGGCTCAGGGAAAGCCATGC +
Preference number: 5 (lower is better)
Translates to: PRSLRRAAPSLGHSVSRGLEAAA*AQGKPC
Trigger: GCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCAG...GCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCTTCTCAGACTACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp AGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGCACAGCTTCAGCGTCTaGTCACTGCCGCACGTCAGG +
Preference number: 5 (lower is better)
Translates to: RAAPSLGHSVSRGHPRSLHSFSV*SLPHVR
Trigger: CCTGACGTGCGGCAGTGACAAGACGCTGAAGCTGTG...CAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp GCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTCACAGCTTCAGCGTCTaGTCACTGCCGCACGTCAGG +
Preference number: 5 (lower is better)
Translates to: AQQLPCVFVQEPQCGVQAHSFSV*SLPHVR
Trigger: CCTGACGTGCGGCAGTGACAAGACGCTGAAGCTGTG...AGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp GACCACATGTGTGTCACGCTCGCTCAGGCAGCAGTCCAGCTTGTATTCCTGGTTCACAGAACCACCGCCTaGTCCCCGCCGCCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: DHMCVTLAQAAVQLVFLVHRTTA*SPPPEQ
Trigger: CTGCTCCGGCGGCGGGGACAAGGCGGTGGTTCTGTG...AACCAGGAATACAAGCTGGACTGCTGCCTGAGCGAGCGTGACACACATGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp TGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGAT +
Preference number: 5 (lower is better)
Translates to: CTRPAAPLCLCPGAAMWSAWPRN*RTTCPD
Trigger: ATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGC...ACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp ACACCTTCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGAT +
Preference number: 5 (lower is better)
Translates to: TPSHWTRHLWPHPASALAAWPRN*RTTCPD
Trigger: ATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGC...AGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp TACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCCGGTCCTTGGTCCTGTaGGTGGGTCCCCTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: YSPSSSPVSLSRSRNVESRSLVL*VGPLAS
Trigger: TGAAGCCAGGGGACCCACCAACAGGACCAAGGACCG...GGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS TCA 90 bp GGTTACTGGGCCGTCGATCTCAGGAGGCGGGAGGAGGACCCGGAATaGAGACGAAGGCGCTCACCATTAAATCGTACGGCTCGCACTGCC +
Preference number: 5 (lower is better)
Translates to: GYWAVDLRRREEDPE*RRRRSPLNRTARTA
Trigger: GGCAGTGCGAGCCGTACGATTTAATGGTGAGCGCCTTCGTCTTCATTCCGGGTCCTCCTCCCGCCTCCTGAGATCGACGGCCCAGTAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS GCA 90 bp AGACGAAGGCGCTCACCATTAAATCGTACGGCTCGCACTGCCCCCTaGCCGCAGTCCAGCGTCTTCAACCGTTTCTGCGGCAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: RRRRSPLNRTARTAP*PQSSVFNRFCGSSG
Trigger: TCCAGAGCTGCCGCAGAAACGGTTGAAGACGCTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGATTTAATGGTGAGCGCCTTCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS GCA 90 bp TCCACAGCTTCAGCGTCTTGTCACTGCCGCACGTCAGGCAGTAATTaGCATCCACTGGGGAACACCAGGCGGGGGTTACTGGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: STASASCHCRTSGSN*HPLGNTRRGLLGRR
Trigger: TCGACGGCCCAGTAACCCCCGCCTGGTGTTCCCCAGTGGATGGCAATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGAAGCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS-3UTR CAA 90 bp GGCTCAGGCCTCCGTGAGCGGCAATCCCAACAGCGGATACTGGAATCAATAGAGCTGGAGGCCGCGGCTTaGGCTCAGGGAAAGCCATGC +
Preference number: 5 (lower is better)
Translates to: GSGLRERQSQQRILESIELEAAA*AQGKPC
Trigger: GCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCAG...CTCTATTGATTCCAGTATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp GCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTG +
Preference number: 5 (lower is better)
Translates to: AQQLPCVFVQEPQCGVQASSPVS*SRSRNV
Trigger: CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT...AGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp TCACACTGGACACGCCATCTCTGGCCTCATCCAGCGTCTGCACTGGCTCAGGCCAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTG +
Preference number: 5 (lower is better)
Translates to: SHWTRHLWPHPASALAQASSPVS*SRSRNV
Trigger: CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT...GGCCTGAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp AGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGAGCCTGAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTG +
Preference number: 5 (lower is better)
Translates to: RAAPSLGHSVSRGHPRSLSSPVS*SRSRNV
Trigger: CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT...CAGGCTCCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp GGCTCAGGCCTCCGTGAGCGGCAATCCCAACAGCGGATACTGGAATCAATAGAGGCAGGCAGGGCTCTGTaGGGTGGTAGGCCAGCGACT +
Preference number: 5 (lower is better)
Translates to: GSGLRERQSQQRILESIEAGRAL*GGRPAT
Trigger: AGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGC...CTCTATTGATTCCAGTATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS GCA 90 bp GGAATGAAGACGAAGGCGCTCACCATTAAATCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAGCGTCTTCAACCGTTTCTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GMKTKALTIKSYGSH*PLPAVQRLQPFLRQ
Trigger: CTGCCGCAGAAACGGTTGAAGACGCTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGATTTAATGGTGAGCGCCTTCGTCTTCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS-3UTR CAA 90 bp TGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGCTCCTTCATCAGCTTaGCCAACTCTCGGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: WPLYSPSSSPVSLSRSRNAPSSA*PTLGAR
Trigger: CCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAGC...ATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548381.5
CDS-3UTR CAA 90 bp TACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCGAGCAGAGACTACTGTaGTCAAAGGAGCCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: YSPSSSPVSLSRSRNVESEQRLL*SKEPAA
Trigger: TGCGGCCGGCTCCTTTGACAACAGTAGTCTCTGCTC...GGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000547481.5
CDS-3UTR CAA 90 bp CTGAGAAGAGCTGCCCCATCCTTAGGTCATAGCGTCTCACGCGGCCATCCACGGGAGCAGAGACTACTGTaGTCAAAGGAGCCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: LRRAAPSLGHSVSRGHPREQRLL*SKEPAA
Trigger: TGCGGCCGGCTCCTTTGACAACAGTAGTCTCTGCTC...CCGTGGATGGCCGCGTGAGACGCTATGACCTAAGGATGGGGCAGCTCTTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547481.5
CDS GCA 90 bp CGTCAGGCAGTAATTGCCATCCACATTAAATCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAGCGTCTTCAACCGTTTCTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RQAVIAIHIKSYGSH*PLPAVQRLQPFLRQ
Trigger: CTGCCGCAGAAACGGTTGAAGACGCTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGATTTAATGTGGATGGCAATTACTGCCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418543.8
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp TCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGGAGCAGAGACTACTGTaGTCAAAGGAGCTCGTAGCC +
Preference number: 5 (lower is better)
Translates to: SPSSSPVSLSRSRNVESREQRLL*SKELVA
Trigger: GGCTACGAGCTCCTTTGACAACAGTAGTCTCTGCTC...CCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp CTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGGAGCAGAGACTACTGTaGTCAAAGGAGCTCGTAGCC +
Preference number: 5 (lower is better)
Translates to: LPCVFVQEPQCGVQAGHQEQRLL*SKELVA
Trigger: GGCTACGAGCTCCTTTGACAACAGTAGTCTCTGCTC...CTGGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCACAGAACCACCGCCTaGTCCCCGCCGCCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCHRTTA*SPPPEQ
Trigger: CTGCTCCGGCGGCGGGGACAAGGCGGTGGTTCTGTG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp AGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTGGAGTCCAGGCTGGACACCAGGCAGCAGTCCAGCTaGTATTCCTGGTTCTTATGG +
Preference number: 5 (lower is better)
Translates to: SSPVSLSRSRNVESRLDTRQQSS*YSWFLW
Trigger: CCATAAGAACCAGGAATACAAGCTGGACTGCTGCCT...GGTGTCCAGCCTGGACTCCACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CAA 90 bp TGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATAGGCAGCAGTCCAGCTaGTATTCCTGGTTCTTATGG +
Preference number: 5 (lower is better)
Translates to: WPLYSPSSSPVSLSRSRNRQQSS*YSWFLW
Trigger: CCATAAGAACCAGGAATACAAGCTGGACTGCTGCCT...ATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CAA 90 bp ATGGCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAAAGGCAGCAGTCCAGCTaGTATTCCTGGTTCTTATGG +
Preference number: 5 (lower is better)
Translates to: MALVLAQQLPCVFVQEPQRQQSS*YSWFLW
Trigger: CCATAAGAACCAGGAATACAAGCTGGACTGCTGCCT...TTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425834.7
ENST00000547481.5
ENST00000548381.5
CDS-3UTR CAA 90 bp GCCCTTGTACTCGCCCAGCAGCTCCCCTGTGTCTTTGTCCAGGAGCCGCAATGTCTTCTGAGAAAGTTATaGCCACTCAGAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: ALVLAQQLPCVFVQEPQCLLRKL*PLRGGW
Trigger: CCAGCCTCCTCTGAGTGGCAATAACTTTCTCAGAAG...ACATTGCGGCTCCTGGACAAAGACACAGGGGAGCTGCTGGGCGAGTACAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553179.5
CDS-3UTR CAA 90 bp GCGGCAATCCCAACAGCGGATACTGGAATCAATAGAGCCGGACAGGATAACTGTCACAGCTTCAGCGTCTaGTCACTGCCGCACGTCAGG +
Preference number: 5 (lower is better)
Translates to: AAIPTADTGINRAGQDNCHSFSV*SLPHVR
Trigger: CCTGACGTGCGGCAGTGACAAGACGCTGAAGCTGTG...ACAGTTATCCTGTCCGGCTCTATTGATTCCAGTATCCGCTGTTGGGATTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCTGGAGGCCGCGGCTTaGGCTCAGGGAAAGCCATGC +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCLEAAA*AQGKPC
Trigger: GCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCAG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGAT +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCAWPRN*RTTCPD
Trigger: ATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCAGGCAGGGCTCTGTaGGGTGGTAGGCCAGCGACT +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCAGRAL*GGRPAT
Trigger: AGTCGCTGGCCTACCACCCAACAGAGCCCTGCCTGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp CACCTTCCCGTCCTCAGAACAGCTGACCACATGTGTGTCACGCTCGCTCAGGCACTTCTATTTATTAATTaGCAGACCCAGCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: HLPVLRTADHMCVTLAQALLFIN*QTQPLP
Trigger: GGGGAGGGGCTGGGTCTGCAAATTAATAAATAGAAG...TGCCTGAGCGAGCGTGACACACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCGGTCCTTGGTCCTGTaGGTGGGTCCCCTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRSLVL*VGPLAS
Trigger: TGAAGCCAGGGGACCCACCAACAGGACCAAGGACCG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCACAGCTTCAGCGTCTaGTCACTGCCGCACGTCAGG +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCHSFSV*SLPHVR
Trigger: CCTGACGTGCGGCAGTGACAAGACGCTGAAGCTGTG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CAA 90 bp CACCAGGTCCCAGAAGAACACCTTCCCGTCCTCAGAACAGCTGACCACATGTGTCTTCTATTTATTAATTaGCAGACCCAGCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: HQVPEEHLPVLRTADHMCLLFIN*QTQPLP
Trigger: GGGGAGGGGCTGGGTCTGCAAATTAATAAATAGAAG...ACACATGTGGTCAGCTGTTCTGAGGACGGGAAGGTGTTCTTCTGGGACCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000548381.5
CDS CCA 90 bp GTAGCTTCATGTGAGACTTGCCCGGCATTAAGAGGCATTCCGTCTTaGAATTCCGGCATTAAGAGGCATTCCGTCTTCATAGCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: VASCETCPALRGIPS*NSGIKRHSVFIARE
Trigger: CTCACGGGCTATGAAGACGGAATGCCTCTTAATGCCGGAATTCCAAGACGGAATGCCTCTTAATGCCGGGCAAGTCTCACATGAAGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000548381.5
ENST00000553179.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCTCCTTCATCAGCTTaGCCAACTCTCGGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCAPSSA*PTLGAR
Trigger: CCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGCTGAAGTGGTGTGCTaGGGTCGCTGTCTACTGCTC +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCAEVVC*GRCLLL
Trigger: GAGCAGTAGACAGCGACCCAAGCACACCACTTCAGC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTGAGCAGAGACTACTGTaGTCAAAGGAGCCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCEQRLL*SKEPAA
Trigger: TGCGGCCGGCTCCTTTGACAACAGTAGTCTCTGCTC...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418543.8
ENST00000425834.7
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTAGCTCCCCTGTGTCTTaGTCCAGGAGCCGCAATGTG +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCSSPVS*SRSRNV
Trigger: CACATTGCGGCTCCTGGACAAAGACACAGGGGAGCT...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTAGGCAGCAGTCCAGCTaGTATTCCTGGTTCTTATGG +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCRQQSS*YSWFLW
Trigger: CCATAAGAACCAGGAATACAAGCTGGACTGCTGCCT...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS-3UTR CAA 90 bp AATAAGATGGTATCTGAAGTCCTTCCATGTCTGTGTCTCGGTCCTTGGTCCTGTCTTCTATTTATTAATTaGCAGACCCAGCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: NKMVSEVLPCLCLGPWSCLLFIN*QTQPLP
Trigger: GGGGAGGGGCTGGGTCTGCAAATTAATAAATAGAAG...ACAGGACCAAGGACCGAGACACAGACATGGAAGGACTTCAGATACCATCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418543.8
ENST00000425834.7
ENST00000548381.5
CDS GCA 72 bp GCCCCCTGCCCGCAGTCCAGCGTCTTCAACCGTTTCTaGGGCAGCTCTGGAGGCCGCGGCTTTGGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: APCPQSSVFNRF*GSSGGRGFGSG
Trigger: CCCTGAGCCAAAGCCGCGGCCTCCAGAGCTGCCGCAGAAACGGTTGAAGACGCTGGACTGCGGGCAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000547255.5
ENST00000547481.5
ENST00000548381.5
ENST00000550939.5
ENST00000551329.1
ENST00000553179.5
CDS CAA 72 bp CGCGGCCATCCACGGAGCCCTGCGTGGCCCCGGAATTaGCGCACGACCTGCCCTGATGCCACATCCCACAGA +
Preference number: 6 (lower is better)
Translates to: RGHPRSPAWPRN*RTTCPDATSHR
Trigger: TCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGCTCCGTGGATGGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000547255.5
CDS GCA 72 bp CGGAGCCCTGCGTGGCCCCGGAATTTGCGCACGACCTaGCCTGATGCCACATCCCACAGAACCACCGCCTTG +
Preference number: 6 (lower is better)
Translates to: RSPAWPRNLRTT*PDATSHRTTAL
Trigger: CAAGGCGGTGGTTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000547255.5
CDS GCA 72 bp GCGGCCATCCACGGAGCCCTGCGTGGCCCCGGAATTTaGGCACGACCTGCCCTGATGCCACATCCCACAGAA +
Preference number: 6 (lower is better)
Translates to: AAIHGALRGPGI*ARPALMPHPTE
Trigger: TTCTGTGGGATGTGGCATCAGGGCAGGTCGTGCGCAAATTCCGGGGCCACGCAGGGCTCCGTGGATGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425834.7
ENST00000547255.5
CDS CCA 72 bp ATTGCCATCCACTGGGGAACACCAGGCGGGGGTTACTaGGCCGTCGATCTCAGGAGGCGGGAGGAGGACCCG +
Preference number: 6 (lower is better)
Translates to: IAIHWGTPGGGY*AVDLRRREEDP
Trigger: CGGGTCCTCCTCCCGCCTCCTGAGATCGACGGCCCAGTAACCCCCGCCTGGTGTTCCCCAGTGGATGGCAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS TCA 72 bp GCACCACCACGCCCTGCCTGCCAGGATCTCGTGGTCTaGCACCTTCACACTGGACACGCCATCTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: APPRPACQDLVV*HLHTGHAISGL
Trigger: GAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGGCAGGGCGTGGTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547797.1
CDS CAA 72 bp ACCGCCTTGTCCCCGCCGCCGGAGCAGAGACTACTGTaGTCAAAGGAGCTCGTAGCCGTGGCCGCTGTACGT +
Preference number: 6 (lower is better)
Translates to: TALSPPPEQRLL*SKELVAVAAVR
Trigger: ACGTACAGCGGCCACGGCTACGAGCTCCTTTGACAACAGTAGTCTCTGCTCCGGCGGCGGGGACAAGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000548381.5
ENST00000553179.5
CDS CAA 90 bp CGGCCATCCACGGAGCTGCAGGAGAGGGTAGATCCAGCGGGAACCTaGACTACACTCACATGGCTCCAGGCAGCCCTGTGCCTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: RPSTELQERVDPAGT*TTLTWLQAALCLPS
Trigger: GCTGGGAAGGCACAGGGCTGCCTGGAGCCATGTGAGTGTAGTCAAGGTTCCCGCTGGATCTACCCTCTCCTGCAGCTCCGTGGATGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552700.1
CDS TCA 72 bp GGCCTCATCCAGCGTCTGCACTGGCTCAGGCCTCCGTaGGCGGCAATCCCAACAGCGGATACGGACAGGATA +
Preference number: 6 (lower is better)
Translates to: GLIQRLHWLRPP*AAIPTADTDRI
Trigger: TATCCTGTCCGTATCCGCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAGACGCTGGATGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547481.5
CDS CCA 72 bp GCAGTCCAGCGTCTTCAACCGTTTCTGCGGCAGCTCTaGAGGCCGCGGCTTTGGCTCAGGGAAAGCCATGCT +
Preference number: 6 (lower is better)
Translates to: AVQRLQPFLRQL*RPRLWLRESHA
Trigger: AGCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCAGAGCTGCCGCAGAAACGGTTGAAGACGCTGGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000547255.5
ENST00000547481.5
ENST00000548381.5
ENST00000550939.5
ENST00000551329.1
ENST00000553179.5
CDS CCA 72 bp GTCACTGCCGCACGTCAGGCAGTAATTGCCATCCACTaGGGAACACCAGGCGGGGGTTACTGGGCCGTCGAT +
Preference number: 6 (lower is better)
Translates to: VTAARQAVIAIH*GTPGGGYWAVD
Trigger: ATCGACGGCCCAGTAACCCCCGCCTGGTGTTCCCCAGTGGATGGCAATTACTGCCTGACGTGCGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS CAA 72 bp TCAACCGTTTCTGCGGCAGCTCTGGAGGCCGCGGCTTaGGCTCAGGGAAAGCCATGCTCCCAGGACTCCTTC +
Preference number: 6 (lower is better)
Translates to: STVSAAALEAAA*AQGKPCSQDSF
Trigger: GAAGGAGTCCTGGGAGCATGGCTTTCCCTGAGCCAAAGCCGCGGCCTCCAGAGCTGCCGCAGAAACGGTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000547255.5
ENST00000547481.5
ENST00000548381.5
ENST00000550939.5
ENST00000551329.1
ENST00000553179.5
CDS GCA 72 bp CCCGAAGCGGGTTCCACAGCTTCAGCGTCTTGTCACTaGCGCACGTCAGGCAGTAATTGCCATCCACTGGGG +
Preference number: 6 (lower is better)
Translates to: PEAGSTASASCH*RTSGSNCHPLG
Trigger: CCCCAGTGGATGGCAATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGAAGCTGTGGAACCCGCTTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS CAA 72 bp ACGGAGCTGCAGGAGAGGGTAGATCCAGCGGGAACCTaGACTACACTCACATGGCTCCAGGCAGCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: TELQERVDPAGT*TTLTWLQAALC
Trigger: GCACAGGGCTGCCTGGAGCCATGTGAGTGTAGTCAAGGTTCCCGCTGGATCTACCCTCTCCTGCAGCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552700.1
CDS GCA 72 bp ACGAAGGCGCTCACCATTAAATCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAGCGTCTTCAACCGTTT +
Preference number: 6 (lower is better)
Translates to: TKALTIKSYGSH*PLPAVQRLQPF
Trigger: AAACGGTTGAAGACGCTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGATTTAATGGTGAGCGCCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS GCA 72 bp TCAGCGTCTTGTCACTGCCGCACGTCAGGCAGTAATTaGCATCCACTGGGGAACACCAGGCGGGGGTTACTG +
Preference number: 6 (lower is better)
Translates to: SASCHCRTSGSN*HPLGNTRRGLL
Trigger: CAGTAACCCCCGCCTGGTGTTCCCCAGTGGATGGCAATTACTGCCTGACGTGCGGCAGTGACAAGACGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546754.5
ENST00000547255.5
ENST00000550939.5
ENST00000551329.1
CDS CCA 72 bp TGCCTGCCAGGATCTCGTGGTCTGACACCTTCACACTaGACACGCCATCTCTGGCCTCATCCAGCGTCTGCA +
Preference number: 6 (lower is better)
Translates to: CLPGSRGLTPSH*TRHLWPHPASA
Trigger: TGCAGACGCTGGATGAGGCCAGAGATGGCGTGTCCAGTGTGAAGGTGTCAGACCACGAGATCCTGGCAGGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547797.1
CDS GCA 72 bp GTAATTGCCATCCACATTAAATCGTACGGCTCGCACTaGCCCCTGCCCGCAGTCCAGCGTCTTCAACCGTTT +
Preference number: 6 (lower is better)
Translates to: VIAIHIKSYGSH*PLPAVQRLQPF
Trigger: AAACGGTTGAAGACGCTGGACTGCGGGCAGGGGGCAGTGCGAGCCGTACGATTTAATGTGGATGGCAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418543.8
ENST00000547481.5
ENST00000548381.5
ENST00000553179.5
CDS CAA 72 bp GTGCTTGGGTCGCTGTCTACTGCTCCTTCATCAGCTTaGCCAACTCTCGGAGCTCGGAGGACACGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: VLGSLSTAPSSA*PTLGARRTRSK
Trigger: TTTGCTTCGTGTCCTCCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAGCAGTAGACAGCGACCCAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000548381.5
ENST00000553179.5
CDS CAA 90 bp GCCTGCTCTTCCAGTGCACAGGAGTGGAATTCTGAAGCTCTGGCCTaGAGACTCAGGCCCAGGGCCAATTACGTCCTACTCCATCATTTC +
Preference number: 6 (lower is better)
Translates to: ACSSSAQEWNSEALA*RLRPRANYVLLHHF
Trigger: GAAATGATGGAGTAGGACGTAATTGGCCCTGGGCCTGAGTCTCAAGGCCAGAGCTTCAGAATTCCACTCCTGTGCACTGGAAGAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552700.1
CDS GCA 72 bp TGCTTGGGTCGCTGTCTACTGCTCCTTCATCAGCTTTaGCAACTCTCGGAGCTCGGAGGACACGAAGCAAAT +
Preference number: 6 (lower is better)
Translates to: CLGRCLLLLHQL*QLSELGGHEAN
Trigger: ATTTGCTTCGTGTCCTCCGAGCTCCGAGAGTTGGCAAAGCTGATGAAGGAGCAGTAGACAGCGACCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000548381.5
ENST00000553179.5
CDS GCA 72 bp GATACGGACAGGATAACTGTGGCCTCTTCATTAAACTaGACCGTGTTCACCTTCCCTGCGTGGCCCCGGAAT +
Preference number: 6 (lower is better)
Translates to: DTDRITVASSLN*TVFTFPAWPRN
Trigger: ATTCCGGGGCCACGCAGGGAAGGTGAACACGGTGCAGTTTAATGAAGAGGCCACAGTTATCCTGTCCGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547481.5
CDS CCA 72 bp TGTGAGACTTGCCCGGCATTAAGAGGCATTCCGTCTTaGAATTCCGGCATTAAGAGGCATTCCGTCTTCATA +
Preference number: 6 (lower is better)
Translates to: CETCPALRGIPS*NSGIKRHSVFI
Trigger: TATGAAGACGGAATGCCTCTTAATGCCGGAATTCCAAGACGGAATGCCTCTTAATGCCGGGCAAGTCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418543.8
ENST00000546754.5
ENST00000548381.5
ENST00000553179.5
CDS CAA 72 bp TTCCGGGTTCATCATTTTGGCATTTCGGTGATCGGGTaGGAACTATTGAAGCCCGCTTTCAGGTTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: FRVHHFGISVIG*ELLKPAFRFFS
Trigger: GGAAAAGAACCTGAAAGCGGGCTTCAATAGTTCCAACCCGATCACCGAAATGCCAAAATGATGAACCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547255.5
CDS CCA 72 bp CCTACTTCCTGTTTATCACTTCCGGGTTCATCATTTTaGCATTTCGGTGATCGGGTTGGAACTATTGAAGCC +
Preference number: 6 (lower is better)
Translates to: PTSCLSLPGSSF*HFGDRVGTIEA
Trigger: GGCTTCAATAGTTCCAACCCGATCACCGAAATGCCAAAATGATGAACCCGGAAGTGATAAACAGGAAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547255.5
CDS CAA 72 bp TCTGTACGGAAAATTCCGCGCCTTAGAAACCCACGCTaGGGTGTAACCTTATTATTGTTCTTCCTGACCTAC +
Preference number: 6 (lower is better)
Translates to: SVRKIPRLRNPR*GVTLLLFFLTY
Trigger: GTAGGTCAGGAAGAACAATAATAAGGTTACACCCAAGCGTGGGTTTCTAAGGCGCGGAATTTTCCGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547255.5
CDS CAA 90 bp AAAATTCCGCGCCTTAGAAACCCACGCTTGGGTGTAACCTTATTATaGTTCTTCCTGACCTACTTCCTGTTTATCACTTCCGGGTTCATC +
Preference number: 6 (lower is better)
Translates to: KIPRLRNPRLGVTLL*FFLTYFLFITSGFI
Trigger: GATGAACCCGGAAGTGATAAACAGGAAGTAGGTCAGGAAGAACAATAATAAGGTTACACCCAAGCGTGGGTTTCTAAGGCGCGGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547255.5
CDS CAA 72 bp CGCCTTAGAAACCCACGCTTGGGTGTAACCTTATTATaGTTCTTCCTGACCTACTTCCTGTTTATCACTTCC +
Preference number: 6 (lower is better)
Translates to: RLRNPRLGVTLL*FFLTYFLFITS
Trigger: GGAAGTGATAAACAGGAAGTAGGTCAGGAAGAACAATAATAAGGTTACACCCAAGCGTGGGTTTCTAAGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547255.5
CDS CAA 90 bp TTAAATCGGTCTGTACGGAAAATTCCGCGCCTTAGAAACCCACGCTaGGGTGTAACCTTATTATTGTTCTTCCTGACCTACTTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: LNRSVRKIPRLRNPR*GVTLLLFFLTYFLF
Trigger: AAACAGGAAGTAGGTCAGGAAGAACAATAATAAGGTTACACCCAAGCGTGGGTTTCTAAGGCGCGGAATTTTCCGTACAGACCGATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547255.5