Pregenerated sensors for WDR82 (Homo sapiens)
Ensembl gene IDs: ENSG00000164091Ensembl transcript IDs: ENST00000296490.8, ENST00000463624.1, ENST00000469000.5, ENST00000487402.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCTAGCAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTaGTGCCTTGATTTACCCCCTAGCAGCTACATATTCTTGAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VLAIHSLFLPAEQKL*CLDLPPSSYIFLSK Trigger: CTTGCTCAAGAATATGTAGCTGCTAGGGGGTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTGCTAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGATCCCCAATAGGGCTTaGGCACCTGTAGCCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPIPNRA*APVALL Trigger: CAGCAGGGCTACAGGTGCTCAAGCCCTATTGGGGAT...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGACTTTGGCTTCCCATaGAGTTGGAGGGTAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPDFGFP*SWRVEG Trigger: CCCTTCTACCCTCCAACTGCATGGGAAGCCAAAGTC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACGCTCTAAGAAGGCCATaGGCCAGCTGCAGCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: QFTAYSCPLNRNCDALIYALRRP*ASCSSS Trigger: AGATGAGCTGCAGCTGGCTCATGGCCTTCTTAGAGC...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACTCCCTTTCAGGCCCTTaGGTCTTTTTCCCACCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QFTAYSCPLNRNCDALIYSLSGP*VFFPPN Trigger: GTTGGGTGGGAAAAAGACCCAAGGGCCTGAAAGGGA...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGCTGAACAGAAATTGTaGTGCCTTGATTTACCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPAEQKL*CLDLPP Trigger: AGGGGGTAAATCAAGGCATCACAATTTCTGTTCAGC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGTTCACAGCCTATTCCTaGCCGCTGAACAGAAATTGT | + |
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Preference number: 2 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPFTAYS*PLNRNC Trigger: ACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAA...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACTTGTGCCTCAGTTTCTaGATCTGCAAGGAGTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: QFTAYSCPLNRNCDALIYLCLSF*ICKECC Trigger: GCAACACTCCTTGCAGATCCAGAAACTGAGGCACAA...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACGTGAGGGCAAGCGGCTaGGCTGCCCAAGCATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNVRASG*AAQAFQ Trigger: TTGAAATGCTTGGGCAGCTCAGCCGCTTGCCCTCAC...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACCAGGCCGGAGTGCAATaGCACGATCTCAACTCACCG | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNQAGVQ*HDLNSP Trigger: CGGTGAGTTGAGATCGTGCCATTGCACTCCGGCCTG...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACCCCCAATTCTTAAGGTaGCAAACGCCGCTGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNPQFLR*QTPLPH Trigger: GTGGGGCAGCGGCGTTTGCCACCTTAAGAATTGGGG...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR GCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACTTCAGGAGGCAGCTTTaGAACCACAGGGCCCAACGA | + |
|
Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNFRRQL*NHRAQR Trigger: TCGTTGGGCCCTGTGGTTGCAAAGCTGCCTCCTGAA...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACGGCTTCCCATGCAGTTaGAGGGTAGAAGGGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNGFPCS*RVEGMC Trigger: GCACATCCCTTCTACCCTCCAACTGCATGGGAAGCC...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR GCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACGAGATTATAGGCGCATaGCACCACGCCCGGCTAATT | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNEIIGA*HHARLI Trigger: AATTAGCCGGGCGTGGTGGCATGCGCCTATAATCTC...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR GCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACATCTGCAAGGAGTGTTaGCTGCATAAATGTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: QFTAYSCPLNRNCDALIYICKEC*LHKCLF Trigger: AAACAAACATTTATGCAGGCAACACTCCTTGCAGAT...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACGAAGCCATGCAAGAGTaGCTATCACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNEAMQE*LSHTHT Trigger: TGTGTGTGTGTGTGATAGTCACTCTTGCATGGCTTC...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR GCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACCTCAGTTTCTGGATCTaGAAGGAGTGTTGCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNLSFWI*KECCLH Trigger: ATGCAGGCAACACTCCTTGCAGATCCAGAAACTGAG...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACAAACTGCAAATGCTCTaGCTTCAGCACCTTATCCCC | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNKLQML*LQHLIP Trigger: GGGGATAAGGTGCTGAAGCCAGAGCATTTGCAGTTT...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACAGGGGTGGTATCATCTaGAGACTATGTACACAATTT | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNRGGII*RLCTQF Trigger: AAATTGTGTACATAGTCTTCAGATGATACCACCCCT...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACGCAGCTACATATTCTTaGGCAAGTCATAACCCTATT | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNAATYS*ASHNPI Trigger: AATAGGGTTATGACTTGCTCAAGAATATGTAGCTGC...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACAACAGTGGTAGCATTTaGGTGGCAAACTTGATTCTT | + |
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Preference number: 2 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNNSGSI*VANLIL Trigger: AAGAATCAAGTTTGCCACCCAAATGCTACCACTGTT...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGTGGCTTCCCATGCAGTaGGAGGGTAGAAGGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPWLPMQ*EGRRDV Trigger: CACATCCCTTCTACCCTCCAACTGCATGGGAAGCCA...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CAA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACCTCCCTTTCAGGCCCTaGGGTCTTTTTCCCACCCAA | + |
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Preference number: 3 (lower is better) Translates to: QFTAYSCPLNRNCDALIYLPFRP*GLFPTQ Trigger: TTGGGTGGGAAAAAGACCCAAGGGCCTGAAAGGGAG...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGAAAGGTGTACGCCTCTaGCACTTTCAGAGGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPKGVRL*HFQRNK Trigger: CTTGTTCCTCTGAAAGTGCAAGAGGCGTACACCTTT...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGCAAGTCATAACCCTATaGTGCCTCAGTTTCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPQVITL*CLSFWI Trigger: GATCCAGAAACTGAGGCACAATAGGGTTATGACTTG...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR TCA 72 bp | ATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTaGTGCCTTGATTTACCCCCTAGCAGCTACATATTC | + |
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Preference number: 3 (lower is better) Translates to: IHSLFLPAEQKL*CLDLPPSSYIF Trigger: GAATATGTAGCTGCTAGGGGGTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR GCA 72 bp | CAGCTACATATTCTTGAGCAAGTCATAACCCTATTGTaGCTCAGTTTCTGGATCTGCAAGGAGTGTTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: QLHILEQVITLL*LSFWICKECCL Trigger: CAGGCAACACTCCTTGCAGATCCAGAAACTGAGGCACAATAGGGTTATGACTTGCTCAAGAATATGTAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CAA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACCCACCGCGCCCAGCCTaGAGGTGGCATGTTTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNPPRPA*RWHVFK Trigger: TTTGAAAACATGCCACCTCAAGGCTGGGCGCGGTGG...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR TCA 72 bp | GATGCCTTGATTTACCCCCTAGCAGCTACATATTCTTaGGCAAGTCATAACCCTATTGTGCCTCAGTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: DALIYPLAATYS*ASHNPIVPQFL Trigger: CAGAAACTGAGGCACAATAGGGTTATGACTTGCTCAAGAATATGTAGCTGCTAGGGGGTAAATCAAGGCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| 3UTR-3UTR CAA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACTTCAAAACCAGGACTTaGGCTTCCCATGCAGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNFKTRT*ASHAVG Trigger: TCCAACTGCATGGGAAGCCAAAGTCCTGGTTTTGAA...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGTGAGGGCAAGCGGCTaGGCTGCCCAAGCATTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPVRASG*AAQAFQ Trigger: TTGAAATGCTTGGGCAGCTCAGCCGCTTGCCCTCAC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGCTCTAAGAAGGCCATaGGCCAGCTGCAGCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPALRRP*ASCSSS Trigger: AGATGAGCTGCAGCTGGCTCATGGCCTTCTTAGAGC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGCCTCTTCTTCCTGCTTaGTCGAGGGTCTTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPPLLPA*SRVFCL Trigger: CAGGCAGAAGACCCTCGACCAAGCAGGAAGAAGAGG...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGTCCTCCTCTTCTTCCTaGTTGGTCGAGGGTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPSSSSS*LVEGLL Trigger: CAGAAGACCCTCGACCAAGCAGGAAGAAGAGGAGGA...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGAGATTATAGGCGCATaGCACCACGCCCGGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPEIIGA*HHARLI Trigger: AATTAGCCGGGCGTGGTGGCATGCGCCTATAATCTC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGAGTCATAGAGCACGATaGAGTCGTCGTCGCTACTCG | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPSHRAR*SRRRYS Trigger: CGAGTAGCGACGACGACTCCATCGTGCTCTATGACT...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACCCCCAATTCTTAAGGTaGCAAACGCCGCTGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QFTAYSCPLNRNCDALIYPQFLR*QTPLPH Trigger: GTGGGGCAGCGGCGTTTGCCACCTTAAGAATTGGGG...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACTTGCCCAGGCCGGAGTaGAATGGCACGATCTCAACT | + |
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Preference number: 4 (lower is better) Translates to: QFTAYSCPLNRNCDALIYLPRPE*NGTIST Trigger: AGTTGAGATCGTGCCATTGCACTCCGGCCTGGGCAA...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGAAGCCATGCAAGAGTaGCTATCACACACACACACA | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPEAMQE*LSHTHT Trigger: TGTGTGTGTGTGTGATAGTCACTCTTGCATGGCTTC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACGACTTTGGCTTCCCATaGAGTTGGAGGGTAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: QFTAYSCPLNRNCDALIYDFGFP*SWRVEG Trigger: CCCTTCTACCCTCCAACTGCATGGGAAGCCAAAGTC...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGCTCAGTTTCTGGATCTaGAAGGAGTGTTGCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPLSFWI*KECCLH Trigger: ATGCAGGCAACACTCCTTGCAGATCCAGAAACTGAG...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGAAACTGCAAATGCTCTaGCTTCAGCACCTTATCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPKLQML*LQHLIP Trigger: GGGGATAAGGTGCTGAAGCCAGAGCATTTGCAGTTT...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGAAGGTGTACGCCTCTTaGACTTTCAGAGGAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPKVYAS*TFRGTS Trigger: ACTTGTTCCTCTGAAAGTGCAAGAGGCGTACACCTT...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGCAGCTACATATTCTTaGGCAAGTCATAACCCTATT | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPAATYS*ASHNPI Trigger: AATAGGGTTATGACTTGCTCAAGAATATGTAGCTGC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACGCTGAACAGAAATTGTaGTGCCTTGATTTACCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QFTAYSCPLNRNCDALIYAEQKL*CLDLPP Trigger: AGGGGGTAAATCAAGGCATCACAATTTCTGTTCAGC...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGCAATCATTCCTACTGTaGATTTTCTACCCGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPQSFLL*IFYPEK Trigger: CTTTTCCGGGTAGAAAATTCACAGTAGGAATGATTG...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACATCCCCAATAGGGCTTaGGCACCTGTAGCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNIPNRA*APVALL Trigger: CAGCAGGGCTACAGGTGCTCAAGCCCTATTGGGGAT...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGAACAGTGGTAGCATTTaGGTGGCAAACTTGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPNSGSI*VANLIL Trigger: AAGAATCAAGTTTGCCACCCAAATGCTACCACTGTT...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACCACACCAAAAATCTATaGACAGAAATGTCTAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: QFTAYSCPLNRNCDALIYHTKNL*TEMSRG Trigger: CCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTG...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACTCCCTTTCAGGCCCTTaGGTCTTTTTCCCACCCAAC | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNSLSGP*VFFPPN Trigger: GTTGGGTGGGAAAAAGACCCAAGGGCCTGAAAGGGA...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACCCTATTCCTGCCCGCTaGACAGAAATTGTGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNPIPAR*TEIVMP Trigger: AGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGG...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACTTGTGCCTCAGTTTCTaGATCTGCAAGGAGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNLCLSF*ICKECC Trigger: GCAACACTCCTTGCAGATCCAGAAACTGAGGCACAA...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACTTCACAGCCTATTCCTaGCCGCTGAACAGAAATTGT | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNFTAYS*PLNRNC Trigger: ACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAA...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACAAACATCAGTGGCTTTaGCCCCAATTCTTAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNKHQWL*PQFLRW Trigger: CCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTT...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR TCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACTTTGGGTGGCAAACTTaGTTCTTTCTAAAATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNFGWQT*FFLKFP Trigger: TGGGAATTTTAGAAAGAATCAAGTTTGCCACCCAAA...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR GCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACATCTGCAAGGAGTGTTaGCTGCATAAATGTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNICKEC*LHKCLF Trigger: AAACAAACATTTATGCAGGCAACACTCCTTGCAGAT...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CCA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACTCAAATAAACATCAGTaGCTTTGGCCCCAATTCTTA | + |
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Preference number: 4 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNSNKHQ*LWPQFL Trigger: TAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGA...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS CCA 90 bp | CGGCCGGAGCTGTGGGCTGGTAAGTCTGCGCCGCCAGGGCTCGCATaGCCTTCAGAAGCGGTCCCTGGGCTGGGCGATGACGGGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RPELWAGKSAPPGLA*PSEAVPGLGDDGSW Trigger: CCAGGACCCGTCATCGCCCAGCCCAGGGACCGCTTCTGAAGGCCATGCGAGCCCTGGCGGCGCAGACTTACCAGCCCACAGCTCCGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS CCA 90 bp | CTGCGCCGCCAGGGCTCGCATGGCCTTCAGAAGCGGTCCCTGGGCTaGGCGATGACGGGTCCTGGTGGCAGCAGGCCCTTCTTTCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: LRRQGSHGLQKRSLG*AMTGPGGSRPFFLA Trigger: TGCGAGAAAGAAGGGCCTGCTGCCACCAGGACCCGTCATCGCCCAGCCCAGGGACCGCTTCTGAAGGCCATGCGAGCCCTGGCGGCGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS TCA 90 bp | GCCAGGGCTCGCATGGCCTTCAGAAGCGGTCCCTGGGCTGGGCGATaGCGGGTCCTGGTGGCAGCAGGCCCTTCTTTCTCGCATCACCGG | + |
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Preference number: 5 (lower is better) Translates to: ARARMAFRSGPWAGR*RVLVAAGPSFSHHR Trigger: CCGGTGATGCGAGAAAGAAGGGCCTGCTGCCACCAGGACCCGTCATCGCCCAGCCCAGGGACCGCTTCTGAAGGCCATGCGAGCCCTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS CCA 90 bp | GCATGGCCTTCAGAAGCGGTCCCTGGGCTGGGCGATGACGGGTCCTaGTGGCAGCAGGCCCTTCTTTCTCGCATCACCGGGCATTACGCG | + |
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Preference number: 5 (lower is better) Translates to: AWPSEAVPGLGDDGS*WQQALLSRITGHYA Trigger: CGCGTAATGCCCGGTGATGCGAGAAAGAAGGGCCTGCTGCCACCAGGACCCGTCATCGCCCAGCCCAGGGACCGCTTCTGAAGGCCATGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS CCA 90 bp | AATTATGTTTCCGTTCTCCAGCGCTGGGCACCGCGGCCGGAGCTGTaGGCTGGTAAGTCTGCGCCGCCAGGGCTCGCATGGCCTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: NYVSVLQRWAPRPEL*AGKSAPPGLAWPSE Trigger: TTCTGAAGGCCATGCGAGCCCTGGCGGCGCAGACTTACCAGCCCACAGCTCCGGCCGCGGTGCCCAGCGCTGGAGAACGGAAACATAATT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS-3UTR CAA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGTCCTCTTCTTCCTGCTaGGTCGAGGGTCTTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPSSSSC*VEGLLP Trigger: AGGCAGAAGACCCTCGACCAAGCAGGAAGAAGAGGA...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CAA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGCTCCCTTTCAGGCCCTaGGGTCTTTTTCCCACCCAA | + |
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Preference number: 5 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPLPFRP*GLFPTQ Trigger: TTGGGTGGGAAAAAGACCCAAGGGCCTGAAAGGGAG...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CAA 90 bp | CTGTCAAATAAACATCAGTGGCTTTGGCCCCAATTCTTAAGGTGGCAAACGCCGGGAGTTTTGCTGTTGTaGCCCAGGCCGGAGTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: LSNKHQWLWPQFLRWQTPGVLLL*PRPECN Trigger: ATTGCACTCCGGCCTGGGCAACAACAGCAAAACTCC...CGGCGTTTGCCACCTTAAGAATTGGGGCCAAAGCCACTGATGTTTATTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CAA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACTTCAAAACCAGGACTTaGGCTTCCCATGCAGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: QFTAYSCPLNRNCDALIYFKTRT*ASHAVG Trigger: TCCAACTGCATGGGAAGCCAAAGTCCTGGTTTTGAA...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CAA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACAAAGGTGTACGCCTCTaGCACTTTCAGAGGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: QFTAYSCPLNRNCDALIYKGVRL*HFQRNK Trigger: CTTGTTCCTCTGAAAGTGCAAGAGGCGTACACCTTT...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS-3UTR CAA 90 bp | CAATTCACAGCCTATTCCTGCCCGCTGAACAGAAATTGTGATGCCTTGATTTACAGAAATTGTGATGCCTaGATTTACCCCCTAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: QFTAYSCPLNRNCDALIYRNCDA*IYPLAA Trigger: AGCTGCTAGGGGGTAAATCAAGGCATCACAATTTCT...GTAAATCAAGGCATCACAATTTCTGTTCAGCGGGCAGGAATAGGCTGTGAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS TCA 90 bp | CTTAAAGAAAAATATGTGGCTGTTGAGCTAACAGACTTAAAGAGGTaGGCAGCCATGGCAGTTAAACTGAAGATCAGGTTGAACCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LKEKYVAVELTDLKR*AAMAVKLKIRLNPG Trigger: GCCAGGGTTCAACCTGATCTTCAGTTTAACTGCCATGGCTGCTCACCTCTTTAAGTCTGTTAGCTCAACAGCCACATATTTTTCTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487402.1 |
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| CDS-3UTR CAA 90 bp | TATGTAAACACACCAAAAATCTATGCACAGAAATGTCTAGGGGGAACATTTAACCAAGTCATAACCCTATaGTGCCTCAGTTTCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: YVNTPKIYAQKCLGGTFNQVITL*CLSFWI Trigger: GATCCAGAAACTGAGGCACAATAGGGTTATGACTTG...GTTAAATGTTCCCCCTAGACATTTCTGTGCATAGATTTTTGGTGTGTTTACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296490.8 |
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| CDS CCA 72 bp | TCCGTTCTCCAGCGCTGGGCACCGCGGCCGGAGCTGTaGGCTGGTAAGTCTGCGCCGCCAGGGCTCGCATGG | + |
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Preference number: 6 (lower is better) Translates to: SVLQRWAPRPEL*AGKSAPPGLAW Trigger: CCATGCGAGCCCTGGCGGCGCAGACTTACCAGCCCACAGCTCCGGCCGCGGTGCCCAGCGCTGGAGAACGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS CCA 72 bp | CAGGGCTCGCATGGCCTTCAGAAGCGGTCCCTGGGCTaGGCGATGACGGGTCCTGGTGGCAGCAGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QGSHGLQKRSLG*AMTGPGGSRPF Trigger: GAAGGGCCTGCTGCCACCAGGACCCGTCATCGCCCAGCCCAGGGACCGCTTCTGAAGGCCATGCGAGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS TCA 72 bp | CTCTTTGGTCTGTGCTGGGCCACCGGAGGGAGGCACTaGGACTCGGGCCCAGGGCCTCCGCCGCACTCACTT | + |
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Preference number: 6 (lower is better) Translates to: LFGLCWATGGRH*DSGPGPPPHSL Trigger: AAGTGAGTGCGGCGGAGGCCCTGGGCCCGAGTCTCAGTGCCTCCCTCCGGTGGCCCAGCACAGACCAAAGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469000.5 |
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| CDS CCA 72 bp | CTGTGGGCTGGTAAGTCTGCGCCGCCAGGGCTCGCATaGCCTTCAGAAGCGGTCCCTGGGCTGGGCGATGAC | + |
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Preference number: 6 (lower is better) Translates to: LWAGKSAPPGLA*PSEAVPGLGDD Trigger: GTCATCGCCCAGCCCAGGGACCGCTTCTGAAGGCCATGCGAGCCCTGGCGGCGCAGACTTACCAGCCCACAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS TCA 72 bp | CGCATGGCCTTCAGAAGCGGTCCCTGGGCTGGGCGATaGCGGGTCCTGGTGGCAGCAGGCCCTTCTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RMAFRSGPWAGR*RVLVAAGPSFS Trigger: CGAGAAAGAAGGGCCTGCTGCCACCAGGACCCGTCATCGCCCAGCCCAGGGACCGCTTCTGAAGGCCATGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463624.1 |
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| CDS GCA 72 bp | TTGAAAGCATCGAGTCATCCCAGGGGTTCACAGGGGTaGTTTCTAATAAGAGGGCATTTAACTTGGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LKASSHPRGSQG*FLIRGHLTWEG Trigger: CCCCTCCCAAGTTAAATGCCCTCTTATTAGAAAGCACCCCTGTGAACCCCTGGGATGACTCGATGCTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487402.1 |
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| CDS TCA 72 bp | AAATATGTGGCTGTTGAGCTAACAGACTTAAAGAGGTaGGCAGCCATGGCAGTTAAACTGAAGATCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: KYVAVELTDLKR*AAMAVKLKIRL Trigger: CAACCTGATCTTCAGTTTAACTGCCATGGCTGCTCACCTCTTTAAGTCTGTTAGCTCAACAGCCACATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487402.1 |
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| CDS CAA 72 bp | GTTCTCCATCAGTATGTTGACCCACCCTCAACTCATTaGAACATTCTTCAATTGGACACACAAATTACAATG | + |
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Preference number: 6 (lower is better) Translates to: VLHQYVDPPSTH*NILQLDTQITM Trigger: CATTGTAATTTGTGTGTCCAATTGAAGAATGTTCAAATGAGTTGAGGGTGGGTCAACATACTGATGGAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487402.1 |
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| CDS CAA 90 bp | TTGTCTAGAGTTCTCCATCAGTATGTTGACCCACCCTCAACTCATTaGAACATTCTTCAATTGGACACACAAATTACAATGAAAATAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSRVLHQYVDPPSTH*NILQLDTQITMKIN Trigger: GTTTATTTTCATTGTAATTTGTGTGTCCAATTGAAGAATGTTCAAATGAGTTGAGGGTGGGTCAACATACTGATGGAGAACTCTAGACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487402.1 |
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