Pregenerated sensors for WDR77 (Homo sapiens)
Ensembl gene IDs: ENSG00000116455Ensembl transcript IDs: ENST00000235090.10, ENST00000449340.1, ENST00000459665.1, ENST00000497278.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTaGGAAATATTTTGCCCATATTCCTTCAGACTTTCCCAGTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: LLKGNHVKGEAWKLY*EIFCPYSFRLSQFH Trigger: ATGAAACTGGGAAAGTCTGAAGGAATATGGGCAAAATATTTCTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGAAGCTGGGGAAGCACAGGAAAAATAATGGGCTACAAGACCAACACCATCCAAGAACCCAGGGATaGCCACATCCCATAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: FGKLGKHRKNNGLQDQHHPRTQG*PHPITH Trigger: GTGGGTTATGGGATGTGGGCATCCCTGGGTTCTTGG...ATGGTGTTGGTCTTGTAGCCCATTATTTTTCCTGTGCTTCCCCAGCTTCCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGCAGGCTGAGAGACGATaGCTATTAACGGCACAGATC | + |
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Preference number: 2 (lower is better) Translates to: VRSCVKPYQVLLLPQSELQAERR*LLTAQI Trigger: GATCTGTGCCGTTAATAGGCATCGTCTCTCAGCCTG...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAGCTTTACTGAGAAATATTTTGCCCATATTCCTTCAGACTTTCCCAGTTGCTTCTTCCTCAGAGTaGGCTGGGCTGCATTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: MEALLRNILPIFLQTFPVASSSE*AGLHFC Trigger: ACAAAAATGCAGCCCAGCTCACTCTGAGGAAGAAGC...AACTGGGAAAGTCTGAAGGAATATGGGCAAAATATTTCTCAGTAAAGCTTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAGCTTTACTGAGAAATATTTTGCCCATATTCCTTCAGACTTTCCCAGTTAACCGTACCAAGTCCTaGTTCTTCCTCAGAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: MEALLRNILPIFLQTFPVNRTKS*FFLRVS Trigger: GCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTT...AACTGGGAAAGTCTGAAGGAATATGGGCAAAATATTTCTCAGTAAAGCTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTGAGTCCATGACTCCTAACTaGCAATATCCACTCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: MFYSRVIMSRVKHGSFTESMTPN*QYPLHQ Trigger: TTGGTGGAGTGGATATTGCCAGTTAGGAGTCATGGA...CTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTGAGAAGACAGGCCAACAATaGCTAAACTCTTTATTTCAC | + |
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Preference number: 2 (lower is better) Translates to: MFYSRVIMSRVKHGSFTEKTGQQ*LNSLFH Trigger: GTGAAATAAAGAGTTTAGGCATTGTTGGCCTGTCTT...CTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| 3UTR-3UTR CAA 90 bp | ATGGAAGCTTTACTGAGAAATATTTTGCCCATATTCCTTCAGACTTTCCCAGTTTTTAATGGTAAGGAGTaGTGTAAAACCGTACCAAGT | + |
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Preference number: 3 (lower is better) Translates to: MEALLRNILPIFLQTFPVFNGKE*CKTVPS Trigger: ACTTGGTACGGTTTTACACAACTCCTTACCATTAAA...AACTGGGAAAGTCTGAAGGAATATGGGCAAAATATTTCTCAGTAAAGCTTCCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR GCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGCCAACTGCCGTTCCATaGAGGCGGGCGCATTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VRSCVKPYQVLLLPQSELPTAVP*RRAHLG Trigger: CCCCAAATGCGCCCGCCTGCATGGAACGGCAGTTGG...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | TCCCATAACCCACCCAGACACGGCCAATTCCTCATAGACAGCTACATAAAACCCACTGCAGCCAATCTGTaGTGCTGGCTTGGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: SHNPPRHGQFLIDSYIKPTAANL*CWLGTA Trigger: CGCTGTCCCAAGCCAGCATCACAGATTGGCTGCAGT...GGGTTTTATGTAGCTGTCTATGAGGAATTGGCCGTGTCTGGGTGGGTTATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | TCCCATAACCCACCCAGACACGGCCAATTCCTCATAGACAGCTACATAAAACCCCTGGGAGAGGTTCTGTaGGCACAACGTGGTGGACGA | + |
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Preference number: 4 (lower is better) Translates to: SHNPPRHGQFLIDSYIKPLGEVL*AQRGGR Trigger: TCGTCCACCACGTTGTGCCCACAGAACCTCTCCCAG...GGGTTTTATGTAGCTGTCTATGAGGAATTGGCCGTGTCTGGGTGGGTTATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR GCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGGGTAGCCAGGCGCACTaGAGCCAATCTGTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: VRSCVKPYQVLLLPQSELGSQAH*SQSVML Trigger: CAGCATCACAGATTGGCTGCAGTGCGCCTGGCTACC...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | TCCCATAACCCACCCAGACACGGCCAATTCCTCATAGACAGCTACATAAAACCCTCTGTGATGCTGGCTTaGGACAGCGGGTATCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SHNPPRHGQFLIDSYIKPSVMLA*DSGYPR Trigger: TCTGGGATACCCGCTGTCCCAAGCCAGCATCACAGA...GGGTTTTATGTAGCTGTCTATGAGGAATTGGCCGTGTCTGGGTGGGTTATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGCTGGGAGTGTACAGCTaGGCTCAGGACACAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VRSCVKPYQVLLLPQSELLGVYS*AQDTAC Trigger: ACAAGCTGTGTCCTGAGCTCAGCTGTACACTCCCAG...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR GCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGCCAAGAACCCAGGGATaGCCACATCCCATAACCCAC | + |
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Preference number: 4 (lower is better) Translates to: VRSCVKPYQVLLLPQSELPRTQG*PHPITH Trigger: GTGGGTTATGGGATGTGGGCATCCCTGGGTTCTTGG...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGCTGGGGAAGCACAGGAAAAATAATGGGCTACAAGACCAACACCATAACCTAGACTCAAACTaGACGCCGGCCGGAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: FGKLGKHRKNNGLQDQHHNLDSN*TPAGDS Trigger: GGAGTCTCCGGCCGGCGTCCAGTTTGAGTCTAGGTT...ATGGTGTTGGTCTTGTAGCCCATTATTTTTCCTGTGCTTCCCCAGCTTCCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | TTTGGGAAGCTGGGGAAGCACAGGAAAAATAATGGGCTACAAGACCAACACCATAGGCAGCAACACAAGTaGCCTGAGCAGCATGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: FGKLGKHRKNNGLQDQHHRQQHK*PEQHEL Trigger: GAGCTCATGCTGCTCAGGTCACTTGTGTTGCTGCCT...ATGGTGTTGGTCTTGTAGCCCATTATTTTTCCTGTGCTTCCCCAGCTTCCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | ATGGAAGCTTTACTGAGAAATATTTTGCCCATATTCCTTCAGACTTTCCCAGTTAGCGCCCACTCAGGCTaGAGGCCCCGAGGAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: MEALLRNILPIFLQTFPVSAHSG*RPRGEA Trigger: CGCTTCTCCTCGGGGCCTCCAGCCTGAGTGGGCGCT...AACTGGGAAAGTCTGAAGGAATATGGGCAAAATATTTCTCAGTAAAGCTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | TCCCATAACCCACCCAGACACGGCCAATTCCTCATAGACAGCTACATAAAACCCCAAGGTCCCAAACCTTaGTGCAGATGTCTTTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SHNPPRHGQFLIDSYIKPQGPKP*CRCLCY Trigger: GTAGCAAAGACATCTGCATCAAGGTTTGGGACCTTG...GGGTTTTATGTAGCTGTCTATGAGGAATTGGCCGTGTCTGGGTGGGTTATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | TTTGGGAAGCTGGGGAAGCACAGGAAAAATAATGGGCTACAAGACCAACACCATGTCCAGCACAGCAAGTaGGCAGTCTTCACTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FGKLGKHRKNNGLQDQHHVQHSK*AVFTER Trigger: TCTCTCAGTGAAGACTGCTCACTTGCTGTGCTGGAC...ATGGTGTTGGTCTTGTAGCCCATTATTTTTCCTGTGCTTCCCCAGCTTCCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGGCTTCTTCCTCAGAGTaGGCTGGGCTGCATTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VRSCVKPYQVLLLPQSELASSSE*AGLHFC Trigger: ACAAAAATGCAGCCCAGCTCACTCTGAGGAAGAAGC...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR GCA 90 bp | TTTGGGAAGCTGGGGAAGCACAGGAAAAATAATGGGCTACAAGACCAACACCATAACCGTACCAAGTCCTaGTTCTTCCTCAGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FGKLGKHRKNNGLQDQHHNRTKS*FFLRVS Trigger: GCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTT...ATGGTGTTGGTCTTGTAGCCCATTATTTTTCCTGTGCTTCCCCAGCTTCCCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | CTAACTGGCAATATCCACTCCACCAACCCAAGAATAAATATTTACCTTAAGTTCGCAGGCGGGCGCATTTaGGGGAAGATTCCACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LTGNIHSTNPRINIYLKFAGGRI*GKIPLP Trigger: CGGGAGTGGAATCTTCCCCCAAATGCGCCCGCCTGC...GAACTTAAGGTAAATATTTATTCTTGGGTTGGTGGAGTGGATATTGCCAGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGCTGGGGAAGCACAGGAAAAATAATGGGCTACAAGACCAACACCATCACAGCTTGTACTCTTaGTGTCCACAAGGGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: FGKLGKHRKNNGLQDQHHHSLYS*CPQGRL Trigger: CAGTCTCCCTTGTGGACACCAAGAGTACAAGCTGTG...ATGGTGTTGGTCTTGTAGCCCATTATTTTTCCTGTGCTTCCCCAGCTTCCCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | ATGTTTTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTGAGAGAACACCAGCCCAGTaGCACACTGGGAGTGTACAG | + |
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Preference number: 4 (lower is better) Translates to: MFYSRVIMSRVKHGSFTERTPAQ*HTGSVQ Trigger: CTGTACACTCCCAGTGTGTCACTGGGCTGGTGTTCT...CTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGTCCATGACTCCTAACTaGCAATATCCACTCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: VRSCVKPYQVLLLPQSELSMTPN*QYPLHQ Trigger: TTGGTGGAGTGGATATTGCCAGTTAGGAGTCATGGA...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | ATGGAAGCTTTACTGAGAAATATTTTGCCCATATTCCTTCAGACTTTCCCAGTTAGCATGAGCTCGGTATaGACTCAGTACCACCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MEALLRNILPIFLQTFPVSMSSV*TQYHLL Trigger: CAGCAGGTGGTACTGAGTTCATACCGAGCTCATGCT...AACTGGGAAAGTCTGAAGGAATATGGGCAAAATATTTCTCAGTAAAGCTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR GCA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGAAGACAGGCCAACAATaGCTAAACTCTTTATTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VRSCVKPYQVLLLPQSELKTGQQ*LNSLFH Trigger: GTGAAATAAAGAGTTTAGGCATTGTTGGCCTGTCTT...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR TCA 90 bp | TTTGGGAAGCTGGGGAAGCACAGGAAAAATAATGGGCTACAAGACCAACACCATGCATGGAAGCTTTACTaGGAAATATTTTGCCCATAT | + |
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Preference number: 4 (lower is better) Translates to: FGKLGKHRKNNGLQDQHHAWKLY*EIFCPY Trigger: ATATGGGCAAAATATTTCTCAGTAAAGCTTCCATGC...ATGGTGTTGGTCTTGTAGCCCATTATTTTTCCTGTGCTTCCCCAGCTTCCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR GCA 90 bp | ATGGAAGCTTTACTGAGAAATATTTTGCCCATATTCCTTCAGACTTTCCCAGTTCAGAGTGAGCTGGGCTaGATTTTTGTGACTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: MEALLRNILPIFLQTFPVQSELG*IFVTGS Trigger: GCTTCCAGTCACAAAAATGCAGCCCAGCTCACTCTG...AACTGGGAAAGTCTGAAGGAATATGGGCAAAATATTTCTCAGTAAAGCTTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CCA 90 bp | ATGTTTTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTGAGCTCACAAAGTCTCTGTaGGCTTGGCTTCTAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: MFYSRVIMSRVKHGSFTELTKSL*AWLLNN Trigger: GTTGTTTAGAAGCCAAGCCCACAGAGACTTTGTGAG...CTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | TCCCATAACCCACCCAGACACGGCCAATTCCTCATAGACAGCTACATAAAACCCGCTACCACTGACAGCTaGTGTGCCAGAGCTCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: SHNPPRHGQFLIDSYIKPATTDS*CARAQD Trigger: GTCTTGAGCTCTGGCACACAAGCTGTCAGTGGTAGC...GGGTTTTATGTAGCTGTCTATGAGGAATTGGCCGTGTCTGGGTGGGTTATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | ATGTTTTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTGAGTGCAGGCGGGCGCATTaGGGGGAAGATTCCACTCCC | + |
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Preference number: 5 (lower is better) Translates to: MFYSRVIMSRVKHGSFTECRRAH*GEDSTP Trigger: GGGAGTGGAATCTTCCCCCAAATGCGCCCGCCTGCA...CTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAAAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | TCCCATAACCCACCCAGACACGGCCAATTCCTCATAGACAGCTACATAAAACCCAGCTCAGGACACAGCTaGTACTCTTGGTGTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: SHNPPRHGQFLIDSYIKPSSGHS*YSWCPQ Trigger: TTGTGGACACCAAGAGTACAAGCTGTGTCCTGAGCT...GGGTTTTATGTAGCTGTCTATGAGGAATTGGCCGTGTCTGGGTGGGTTATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | TCCCATAACCCACCCAGACACGGCCAATTCCTCATAGACAGCTACATAAAACCCGCAAGGTCCCAAACCTaGATGCAGATGTCTTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: SHNPPRHGQFLIDSYIKPARSQT*MQMSLL Trigger: TAGCAAAGACATCTGCATCAAGGTTTGGGACCTTGC...GGGTTTTATGTAGCTGTCTATGAGGAATTGGCCGTGTCTGGGTGGGTTATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | GTAAGGAGTTGTGTAAAACCGTACCAAGTCCTGCTTCTTCCTCAGAGTGAGCTGACACAGCTTGTACTCTaGGTGTCCACAAGGGAGACT | + |
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Preference number: 5 (lower is better) Translates to: VRSCVKPYQVLLLPQSELTQLVL*VSTRET Trigger: AGTCTCCCTTGTGGACACCAAGAGTACAAGCTGTGT...CAGCTCACTCTGAGGAAGAAGCAGGACTTGGTACGGTTTTACACAACTCCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | ATGTTTTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTGAGATCTGTGATGCTGGCTaGGGACAGCGGGTATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: MFYSRVIMSRVKHGSFTEICDAG*GQRVSQ Trigger: CTGGGATACCCGCTGTCCCAAGCCAGCATCACAGAT...CTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | CTAACTGGCAATATCCACTCCACCAACCCAAGAATAAATATTTACCTTAAGTTCTTGATGCAGATGTCTTaGCTACCACTGACAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LTGNIHSTNPRINIYLKFLMQMS*LPLTAC Trigger: ACAAGCTGTCAGTGGTAGCAAAGACATCTGCATCAA...GAACTTAAGGTAAATATTTATTCTTGGGTTGGTGGAGTGGATATTGCCAGTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | ATGTTTTACTCAAGGGTAATCATGTCAAGGGTGAAGCATGGAAGCTTTACTGAGCAGAGTAAAATTCTATaGTCCTCGCTGCATGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: MFYSRVIMSRVKHGSFTEQSKIL*SSLHER Trigger: TCTTTCATGCAGCGAGGACAATAGAATTTTACTCTG...CTCAGTAAAGCTTCCATGCTTCACCCTTGACATGATTACCCTTGAGTAAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS-3UTR CAA 90 bp | CTAACTGGCAATATCCACTCCACCAACCCAAGAATAAATATTTACCTTAAGTTCTTTAATGGTAAGGAGTaGTGTAAAACCGTACCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LTGNIHSTNPRINIYLKFFNGKE*CKTVPS Trigger: ACTTGGTACGGTTTTACACAACTCCTTACCATTAAA...GAACTTAAGGTAAATATTTATTCTTGGGTTGGTGGAGTGGATATTGCCAGTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS CCA 72 bp | AGCCTCCAACTGCCGTTCCATGCAGGCGGGCGCATTTaGGGGAAGATTCCACTCCCGGGCCGCCGGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SLQLPFHAGGRI*GKIPLPGRRGH Trigger: GTGCCCCCGGCGGCCCGGGAGTGGAATCTTCCCCCAAATGCGCCCGCCTGCATGGAACGGCAGTTGGAGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235090.10 |
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| CDS CAA 72 bp | AACCTTGATGCAGATGTCTTTGCTACCACTGACAGCTaGTGTGCCAGAGCTCAAGACACTGACTGTAGACAC | + |
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Preference number: 6 (lower is better) Translates to: NLDADVFATTDS*CARAQDTDCRH Trigger: GTGTCTACAGTCAGTGTCTTGAGCTCTGGCACACAAGCTGTCAGTGGTAGCAAAGACATCTGCATCAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000235090.10 ENST00000449340.1 ENST00000459665.1 ENST00000497278.5 |
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| CDS CAA 90 bp | AAGGTCCCAAACCTTGATGCAGATGTCTTTGCTACCACTGACAGCTaGTGTGCCAGAGCTCAAGACACTGACTGTAGACACAATGTCATC | + |
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Preference number: 6 (lower is better) Translates to: KVPNLDADVFATTDS*CARAQDTDCRHNVI Trigger: GATGACATTGTGTCTACAGTCAGTGTCTTGAGCTCTGGCACACAAGCTGTCAGTGGTAGCAAAGACATCTGCATCAAGGTTTGGGACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000235090.10 ENST00000449340.1 ENST00000459665.1 ENST00000497278.5 |
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