RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR73 (Homo sapiens)

Ensembl gene IDs: ENSG00000177082

Ensembl transcript IDs: ENST00000398528.7, ENST00000434634.7, ENST00000558019.5, ENST00000558487.1, ENST00000558521.5, ENST00000558608.1, ENST00000559015.5, ENST00000559126.5, ENST00000559178.5, ENST00000559224.5, ENST00000559452.5, ENST00000559877.5, ENST00000559994.5, ENST00000560088.5, ENST00000560182.5, ENST00000560252.5, ENST00000560835.5, ENST00000560966.5, ENST00000561329.5, ENST00000561434.1, ENST00000561447.5

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATaGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACCCTAGGC +
Preference number: 1 (lower is better)
Translates to: RDSRSTTCRLRSLAP*RTPGANVEKTATLG
Trigger: GCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
3UTR CCA 90 bp GGAATCCTGGAGGCTTGGTCCCCAGGCCTTGAGGTGGAATCCCAGTaGCAACTCTCCCCCACAATGGACCTCAGAGCAGTGGGAGCGACG +
Preference number: 1 (lower is better)
Translates to: GILEAWSPGLEVESQ*QLSPTMDLRAVGAT
Trigger: CGTCGCTCCCACTGCTCTGAGGTCCATTGTGGGGGAGAGTTGCCACTGGGATTCCACCTCAAGGCCTGGGGACCAAGCCTCCAGGATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR GCA 90 bp ACACCTGAGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTaGAGACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAAT +
Preference number: 1 (lower is better)
Translates to: TPEVYVVFRDSRSTT*RLRSLAPWRTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR GCA 90 bp ACATCTGAGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTaGAGACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAAT +
Preference number: 1 (lower is better)
Translates to: TSEVYVVFRDSRSTT*RLRSLAPWRTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559224.5
3UTR CCA 90 bp ACTCGCAGCAGCTCTGGGTCAGGGCTAGGTACGGATACTGGGCACTaGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGA +
Preference number: 1 (lower is better)
Translates to: TRSSSGSGLGTDTGH*TELTGWQRSRGSRR
Trigger: TCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR TCA 90 bp CAGCAGCTCTGGGTCAGGGCTAGGTACGGATACTGGGCACTGGACTaGGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAG +
Preference number: 1 (lower is better)
Translates to: QQLWVRARYGYWALD*AHRMAEIPGVKKTK
Trigger: CTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR CCA 90 bp TCAGGGCTAGGTACGGATACTGGGCACTGGACTGAGCTCACAGGATaGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATCTGAG +
Preference number: 1 (lower is better)
Translates to: SGLGTDTGHWTELTG*QRSRGSRRQRRPSE
Trigger: CTCAGATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR TCA 90 bp AGCCCTGGGATTCTAAACTCGGACAAGCCAGCACTGGTTAAGGGCTaGGGGGAACCAGGCACTCAGTGCACCCAGTTTACTATTCTGTGG +
Preference number: 1 (lower is better)
Translates to: SPGILNSDKPALVKG*GEPGTQCTQFTILW
Trigger: CCACAGAATAGTAAACTGGGTGCACTGAGTGCCTGGTTCCCCTCAGCCCTTAACCAGTGCTGGCTTGTCCGAGTTTAGAATCCCAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp AGGGGAACCAGGCACTCAGTGCACCCAGTTTACTATTCTGTGGTGTaGAAAGCACAGGACTTGAGAAGCAGGTGGCACCCAGGAAAGCCT +
Preference number: 1 (lower is better)
Translates to: RGTRHSVHPVYYSVV*KAQDLRSRWHPGKP
Trigger: AGGCTTTCCTGGGTGCCACCTGCTTCTCAAGTCCTGTGCTTTCCACACCACAGAATAGTAAACTGGGTGCACTGAGTGCCTGGTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp CTCCCCCACAATGGACCTCAGAGCAGTGGGAGCGACGCAGTCCTGTaGGAAGCATTCAGGCTCAGAATCAGGAGATGTGATTATTGTCCT +
Preference number: 1 (lower is better)
Translates to: LPHNGPQSSGSDAVL*EAFRLRIRRCDYCP
Trigger: AGGACAATAATCACATCTCCTGATTCTGAGCCTGAATGCTTCCCACAGGACTGCGTCGCTCCCACTGCTCTGAGGTCCATTGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp AGAGAGTGTGAAAGACTGCTCAGTGGCTGGGGTGAGAGTCAAGTCTaGCCAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCT +
Preference number: 1 (lower is better)
Translates to: RECERLLSGWGESQV*PGANLEKSQDLERA
Trigger: AGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTGGCCAGACTTGACTCTCACCCCAGCCACTGAGCAGTCTTTCACACTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp GCTTACCTCTTATTCACTGTGTATCCCCAACACCTGAGGTGTACGTaGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCC +
Preference number: 1 (lower is better)
Translates to: AYLLFTVYPQHLRCT*SSGTPDQRPADFGA
Trigger: GGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTGTTGGGGATACACAGTGAATAAGAGGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR GCA 90 bp GTGGAGAAGACGGCCACCCTAGGCCAGAGACTCTCCTCTTTCTCATaGACAGCAATGGTGCTGACAGCTTTAATGACATCCCTTCAGCGA +
Preference number: 1 (lower is better)
Translates to: VEKTATLGQRLSSFS*TAMVLTALMTSLQR
Trigger: TCGCTGAAGGGATGTCATTAAAGCTGTCAGCACCATTGCTGTGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR TCA 90 bp CCGGACTTCAAGGAGATTCAGAAAACGTCCAGTGCAGGTGGGAAATaGATGGGAGCTAGCATTCCACCAACAAAGTCAGCCCTGGGATTC +
Preference number: 1 (lower is better)
Translates to: PDFKEIQKTSSAGGK*MGASIPPTKSALGF
Trigger: GAATCCCAGGGCTGACTTTGTTGGTGGAATGCTAGCTCCCATTCATTTCCCACCTGCACTGGACGTTTTCTGAATCTCCTTGAAGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR GCA 90 bp AGTAGTCCAGGGTGGCTCACAAAGACCACTTTGAGGCTCTTGCTCTaGTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTTCAGTAACAACA +
Preference number: 1 (lower is better)
Translates to: SSPGWLTKTTLRLLL*SLAKESPFLPSVTT
Trigger: TGTTGTTACTGAAGGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTCTTTGTGAGCCACCCTGGACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR TCA 90 bp AACACCTTTGATGCCTTAGAGGTGGTAGGAGGCCTTCTTTGGGATTaGGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTG +
Preference number: 1 (lower is better)
Translates to: NTFDALEVVGGLLWD*EDSKGNQGIALEDV
Trigger: CACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGAAGGCCTCCTACCACCTCTAAGGCATCAAAGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR TCA 90 bp CTGTTTATATCCCGTCCTCAAATATTGCTTGACTCAACCCTCTACTaGACCAGTAGTCCAGGGTGGCTCACAAAGACCACTTTGAGGCTC +
Preference number: 1 (lower is better)
Translates to: LFISRPQILLDSTLY*TSSPGWLTKTTLRL
Trigger: GAGCCTCAAAGTGGTCTTTGTGAGCCACCCTGGACTACTGGTTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGACGGGATATAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp TTCAAATTCTGGAGAAAAAGAGAGTGTGAAAGACTGCTCAGTGGCTaGGGTGAGAGTCAAGTCTGGCCAGGTGCTAATCTGGAGAAAAGC +
Preference number: 1 (lower is better)
Translates to: FKFWRKRECERLLSG*GESQVWPGANLEKS
Trigger: GCTTTTCTCCAGATTAGCACCTGGCCAGACTTGACTCTCACCCCAGCCACTGAGCAGTCTTTCACACTCTCTTTTTCTCCAGAATTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp ACTTCAAGGAGATTCAGAAAACGTCCAGTGCAGGTGGGAAATGAATaGGAGCTAGCATTCCACCAACAAAGTCAGCCCTGGGATTCTAAA +
Preference number: 1 (lower is better)
Translates to: TSRRFRKRPVQVGNE*ELAFHQQSQPWDSK
Trigger: TTTAGAATCCCAGGGCTGACTTTGTTGGTGGAATGCTAGCTCCCATTCATTTCCCACCTGCACTGGACGTTTTCTGAATCTCCTTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp CTTGAGAGGCACTATCATTCTCATTTCACCTGTCACTTCCAGACATaGGAGCAGAAAGTGAATTTCAGAACTCCATGTCCCCTCCTGCTT +
Preference number: 1 (lower is better)
Translates to: LERHYHSHFTCHFQT*EQKVNFRTPCPLLL
Trigger: AAGCAGGAGGGGACATGGAGTTCTGAAATTCACTTTCTGCTCCCATGTCTGGAAGTGACAGGTGAAATGAGAATGATAGTGCCTCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR TCA 90 bp TCAGGCTCAGAATCAGGAGATGTGATTATTGTCCTGGCTCTGTTATaGCTAATTTGGGTCTGGAATGGCCTCATCGGGGGAAAAATTGGT +
Preference number: 1 (lower is better)
Translates to: SGSESGDVIIVLALL*LIWVWNGLIGGKIG
Trigger: ACCAATTTTTCCCCCGATGAGGCCATTCCAGACCCAAATTAGTCATAACAGAGCCAGGACAATAATCACATCTCCTGATTCTGAGCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 90 bp TCTTGGGCAACCTCTTTAAATACCCTTAGCCTCCATTTTCTCATCTaGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTAT +
Preference number: 1 (lower is better)
Translates to: SWATSLNTLSLHFLI*TVDIVMVSTSLGCY
Trigger: ATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCAGATGAGAAAATGGAGGCTAAGGGTATTTAAAGAGGTTGCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR GCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTaGTTGACTCAACCCTCTACTGAACCAGTAGTCCAGGGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: GDNFKKYCLYPVLKY*LTQPSTEPVVQGGS
Trigger: TGAGCCACCCTGGACTACTGGTTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp GCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTGAAGCACAGCAGAAGCGGAGCCTCGCCCCATaGAGGACTCCGGGTGCCAAT +
Preference number: 2 (lower is better)
Translates to: AHFCRVSTSPSRPEAQQKRSLAP*RTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCG...CTTCTGCTGTGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559224.5
3UTR-3UTR GCA 90 bp CTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGGCTCAGCTGGTTGGGTaGTGGTCCCTGGGACTGCCT +
Preference number: 2 (lower is better)
Translates to: LRFSNGAHFCRVSTSPSRAQLVG*WSLGLP
Trigger: AGGCAGTCCCAGGGACCAGCACCCAACCAGCTGAGC...CCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR-3UTR GCA 90 bp CCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTGAAGCACAACGGTGCCCACTTCTaGCGGGTGTCAACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: PTVPTSAGCQQAPAGLKHNGAHF*RVSTSP
Trigger: GGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTT...GTGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR CCA 90 bp TGCAGACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGCGGAGCCTCGCCCCATaGAGGACTCCGGGTGCCAAT +
Preference number: 2 (lower is better)
Translates to: CRLRSLAPWRTPGANVEKRSLAP*RTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCG...CTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
3UTR-3UTR TCA 90 bp CTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACCCTAGGCGCTCCTCACTGTCACTaGCATCTGAGGTGTACGTGG +
Preference number: 2 (lower is better)
Translates to: LAPWRTPGANVEKTATLGAPHCH*HLRCTW
Trigger: CCACGTACACCTCAGATGTCAGTGACAGTGAGGAGC...GCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559224.5
3UTR-3UTR GCA 90 bp CAGGGCCAGGGCTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCGATTCTCCAACGGTaGCCACTTCTGCCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: QGQGCDSPTVPTSAGCQQAILQR*PLLPGV
Trigger: GACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGC...TTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR CCA 90 bp TGGTTGGGTGCTGGTCCCTGGGACTGCCTAATCCTGCCCCAGCATAGGAGCCCTTTGGGTGCTGGTCCCTaGGACTGCCTAATCCTGCCC +
Preference number: 2 (lower is better)
Translates to: WLGAGPWDCLILPQHRSPLGAGP*DCLILP
Trigger: GGGCAGGATTAGGCAGTCCCAGGGACCAGCACCCAA...AGGGCTCCTATGCTGGGGCAGGATTAGGCAGTCCCAGGGACCAGCACCCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559178.5
3UTR-3UTR GCA 90 bp GATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGGGCGATTCTCCAACGGTaGCCACTTCTGCCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: DGQAILQAWGPSHSQQLWAILQR*PLLPGV
Trigger: GACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGC...CCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR CCA 90 bp ATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGGGCACTCGCAGCAGCTCTaGGTCAGGGCTAGGTACGGA +
Preference number: 2 (lower is better)
Translates to: MAKQFFRPGAQVTRSSSGHSQQL*VRARYG
Trigger: TCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTG...CCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR TCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGGCACTGGTTAAGGGCTaGGGGGAACCAGGCACTCAG +
Preference number: 2 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRALVKG*GEPGTQ
Trigger: CTGAGTGCCTGGTTCCCCTCAGCCCTTAACCAGTGC...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp TCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTGAAGCAGCTCCTCACTGTCACTaGCATCATTGTCTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: SNGAHFCRVSTSPSRPEAAPHCH*HHCLLS
Trigger: GCTGAGCAGACAATGATGTCAGTGACAGTGAGGAGC...TGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR-3UTR GCA 90 bp CTGAGATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTAACGGTGCCCACTTCTaGCGGGTGTCAACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: LRWPSNSSGLGPKSLAAANGAHF*RVSTSP
Trigger: GGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTT...AGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR CCA 90 bp GGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCGTCTGCTCAGCTGGTTaGGTGCTGGTCCCTGGGACT +
Preference number: 2 (lower is better)
Translates to: GLSSQDGRDPGGQEDKDAVCSAG*VLVPGT
Trigger: AGTCCCAGGGACCAGCACCCAACCAGCTGAGCAGAC...GGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR-3UTR CCA 90 bp CAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGGGTCAGGCATTGTCTGCTCAGCTaGTTGGGTGCTGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QAILQAWGPSHSQQLWVRHCLLS*LGAGPW
Trigger: CCAGGGACCAGCACCCAACCAGCTGAGCAGACAATG...CCTGACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR CAA 90 bp GTGGAGGAGTCTCAAGAGGAATCCTGGAGGCTTGGTCCCCAGGCCTaGAGGTGGAATCCCAGTGGCAACTCTCCCCCACAATGGACCTCA +
Preference number: 2 (lower is better)
Translates to: VEESQEESWRLGPQA*RWNPSGNSPPQWTS
Trigger: TGAGGTCCATTGTGGGGGAGAGTTGCCACTGGGATTCCACCTCAAGGCCTGGGGACCAAGCCTCCAGGATTCCTCTTGAGACTCCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp GATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGGACGGATACTGGGCACTaGACTGAGCTCACAGGATGG +
Preference number: 2 (lower is better)
Translates to: DGQAILQAWGPSHSQQLWTDTGH*TELTGW
Trigger: CCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGT...CCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR TCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCGAAACTGAGGCTAAGTaGCGCTGGCAGACTTGCCCA +
Preference number: 2 (lower is better)
Translates to: QVLIWRKAKTWSELEWQAETEAK*RWQTCP
Trigger: TGGGCAAGTCTGCCAGCGTCACTTAGCCTCAGTTTC...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCACTCCTGGACTCAAGTaGTCCACCTGTCTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: QVLIWRKAKTWSELEWQATPGLK*STCLGC
Trigger: GCAGCCAAGACAGGTGGATCACTTGAGTCCAGGAGT...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCCCTCCTGCTTTTCTCTaGGCAGGACTTCCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: QVLIWRKAKTWSELEWQAPPAFL*AGLPVP
Trigger: GGGAACTGGAAGTCCTGCTCAGAGAAAAGCAGGAGG...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp GGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCACAAAGACGCCCATCTaGGCCAAGGCTGGCAATGCT +
Preference number: 2 (lower is better)
Translates to: GLSSQDGRDPGGQEDKDATKTPI*AKAGNA
Trigger: AGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTGT...GGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR GCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGCTCCTGACCGACTACTaGAAAGCCAGGAGCACCTAC +
Preference number: 2 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRLLTDY*KARSTY
Trigger: GTAGGTGCTCCTGGCTTTGCAGTAGTCGGTCAGGAG...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp ATACTGGGCACTGGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAACAGCTGGTTGGGTGCTaGTCCCTGGGACTGCCTAAT +
Preference number: 2 (lower is better)
Translates to: ILGTGLSSQDGRDPGGQEQLVGC*SLGLPN
Trigger: ATTAGGCAGTCCCAGGGACCAGCACCCAACCAGCTG...TTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR-3UTR GCA 90 bp GGGCTAGGTACGGATACTGGGCACTGGACTGAGCTCACAGGATGGCAGAGATCCTCTGCATCTAGGACCTaGAGGCTACTCAGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: GLGTDTGHWTELTGWQRSSASRT*RLLSSS
Trigger: TGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGA...GGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR CCA 90 bp GTGTCTGCATCTAGGACCTGCAGGCTACTCAGCTCCTCACTGTCACTGACATCATTGGGTGCTGGTCCCTaGGACTGCCTAATCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VSASRTCRLLSSSLSLTSLGAGP*DCLILP
Trigger: GGGCAGGATTAGGCAGTCCCAGGGACCAGCACCCAA...TGATGTCAGTGACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR-3UTR CCA 90 bp GGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATCTGAGGTGTACGTaGTCTTCCGGGACTCCAGAT +
Preference number: 2 (lower is better)
Translates to: GLSSQDGRDPGGQEDKDAHLRCT*SSGTPD
Trigger: ATCTGGAGTCCCGGAAGACCACGTACACCTCAGATG...GGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559224.5
3UTR-3UTR TCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGAGATGGATGCCCTGTTaGGTCTTGGGGCACTTTCTA +
Preference number: 2 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRRWMPC*VLGHFL
Trigger: TAGAAAGTGCCCCAAGACTCAACAGGGCATCCATCT...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR GCA 90 bp TCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATCTGAGCTCTGCATCTAGGACCTaGAGGCTACTCAGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: SQDGRDPGGQEDKDAHLSSASRT*RLLSSS
Trigger: TGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGA...GCTCAGATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR CCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGTTGAACCTAGTCACCTaGGGGGACAAGTGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRLNLVT*GDKCGK
Trigger: TTTCCCACACTTGTCCCCCCAGGTGACTAGGTTCAA...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCCTCCCTATGATAGTGTaGAGACAGGGACAAAACGCT +
Preference number: 2 (lower is better)
Translates to: QVLIWRKAKTWSELEWQALPMIV*RQGQNA
Trigger: AGCGTTTTGTCCCTGTCTTCACACTATCATAGGGAG...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCCCACCTCAGCCTCTTaGATAGCTGGGACTGCAGGC +
Preference number: 2 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVAPTSAS*IAGTAG
Trigger: GCCTGCAGTCCCAGCTATTCAAGAGGCTGAGGTGGG...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR GCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGTCAGAAAACGTCCAGTaGAGGTGGGAAATGAATGGG +
Preference number: 2 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRSENVQ*RWEMNG
Trigger: CCCATTCATTTCCCACCTGCACTGGACGTTTTCTGA...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTACAGGAGAAATCCCCTaGCCGGGCGCGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCTGEIP*PGAVAH
Trigger: GTGAGCCACCGCGCCCGGCCAGGGGATTTCTCCTGT...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp GTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATGGGAACATCCTTGGCTTTaGGTCAAGTTTTGTTTTGGT +
Preference number: 2 (lower is better)
Translates to: VFRDSRSTTCRLRSLAPWEHPWL*VKFCFG
Trigger: ACCAAAACAAAACTTGACTCAAAGCCAAGGATGTTC...CCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR-3UTR TCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCTCCTCAAATATTGCTTaGCTCAACCCTCTACTGAAC +
Preference number: 2 (lower is better)
Translates to: QVLIWRKAKTWSELEWQASSNIA*LNPLLN
Trigger: GTTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGA...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCTGTCACTTCCAGACATaGGAGCAGAAAGTGAATTTC +
Preference number: 2 (lower is better)
Translates to: QVLIWRKAKTWSELEWQACHFQT*EQKVNF
Trigger: GAAATTCACTTTCTGCTCCCATGTCTGGAAGTGACA...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTTGGACCTCAGAGCAGTaGGAGCGACGCAGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCWTSEQ*ERRSPV
Trigger: CACAGGACTGCGTCGCTCCCACTGCTCTGAGGTCCA...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTACCATGGTGCCCAGGCTaGTCTCGAACTCCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLPWCPG*SRTPPG
Trigger: TCCAGGAGGAGTTCGAGATCAGCCTGGGCACCATGG...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTCCCCAGGCCTTGAGGTaGAATCCCAGTGGCAACTCT +
Preference number: 2 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCPQALR*NPSGNS
Trigger: AGAGTTGCCACTGGGATTCCACCTCAAGGCCTGGGG...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGATCTCGAACTCCTCCTaGACTCAAGCTATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVAISNSS*TQAILP
Trigger: TGGGAGGATAGCTTGAGTCCAGGAGGAGTTCGAGAT...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTTGGAATACAGTGGCATaGTCACAGCTCACTGCAAAC +
Preference number: 2 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPWNTVA*SQLTAN
Trigger: GTTTGCAGTGAGCTGTGATCATGCCACTGTATTCCA...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR GCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCCAAGTAATTATGCCATaGGTTTCTTCTAACCTTCGC +
Preference number: 2 (lower is better)
Translates to: DHFEALALLFSQGVSLPAQVIMP*VSSNLR
Trigger: GCGAAGGTTAGAAGAAACGCATGGCATAATTACTTG...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR GCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGACAAGTGTGGGAAAGTaGACCTGTGTTCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVATSVGK*TCVPMR
Trigger: TCTCATGGGAACACAGGTGCACTTTCCCACACTTGT...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR GCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGACTTGGCTGCCTACATTaGTGGGATTACAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: LLSLGALSNTFDALEVVGLGCLH*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCAATGTAGGCAGCCAAG...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR GCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGAACCAGGCACTCAGTaGACCCAGTTTACTATTCTG +
Preference number: 2 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPEPGTQ*TQFTIL
Trigger: CAGAATAGTAAACTGGGTGCACTGAGTGCCTGGTTC...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR GCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCTTATACACACCAGTCTaGCATTTAAAAGGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: QVLIWRKAKTWSELEWQALYTPV*HLKGLL
Trigger: CAACAAACCTTTTAAATGGCAGACTGGTGTGTATAA...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGGAACTAGACCTTCTTaGGAGGCACTATCATTCTCA +
Preference number: 2 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPGTRPS*EALSFS
Trigger: TGAGAATGATAGTGCCTCTCAAGAAGGTCTAGTTCC...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTTGGTTTCTACCTCCCTaGGCTGTTATGAGGATCCTG +
Preference number: 2 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCWFLPP*AVMRIL
Trigger: CAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCA...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGAATACAAAAATTACCTaGGCATGGTGGTACGTGCCT +
Preference number: 2 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVANTKIT*AWWYVP
Trigger: AGGCACGTACCACCATGCCCAGGTAATTTTTGTATT...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCTCCATTTTCTCATCTaGACAGTGGACATTGTGATG +
Preference number: 2 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVALHFLI*TVDIVM
Trigger: CATCACAATGTCCACTGTCCAGATGAGAAAATGGAG...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGTGAGCCACTGTGCCTaGTCTATCTTTAAATTCCTA +
Preference number: 2 (lower is better)
Translates to: LLSLGALSNTFDALEVVGVSHCA*SIFKFL
Trigger: TAGGAATTTAAAGATAGACCAGGCACAGTGGCTCAC...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCCTGCCTCACCCTCCTaGGTAGTGGGGATTACAGGT +
Preference number: 2 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTPASPS*VVGITG
Trigger: ACCTGTAATCCCCACTACTCAGGAGGGTGAGGCAGG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR TCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTGGAAAGCACAGGACTTaGGAAGCAGGTGGCACCCAG +
Preference number: 2 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTGKHRT*EAGGTQ
Trigger: CTGGGTGCCACCTGCTTCTCAAGTCCTGTGCTTTCC...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CAA 90 bp GACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTaGACTCAACCCTCTACTGAACCAGTAGTCCAGGGTGGCTCACAA +
Preference number: 2 (lower is better)
Translates to: DNFKKYCLYPVLKYC*TQPSTEPVVQGGSQ
Trigger: TTGTGAGCCACCCTGGACTACTGGTTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGACACAGTATTAGCACTTaGCAAACGTTAGTTTTCATT +
Preference number: 2 (lower is better)
Translates to: LLSLGALSNTFDALEVVGHSIST*QTLVFI
Trigger: AATGAAAACTAACGTTTGCCAAGTGCTAATACTGTG...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTAAGGTTTGTTGTTCTTaGGCAACCTCTTTAAATACC +
Preference number: 2 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCKVCCS*ATSLNT
Trigger: GGTATTTAAAGAGGTTGCCCAAGAACAACAAACCTT...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCTAGTCTCGAACTCCTaGACTCAAGTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTLVSNS*TQVIHL
Trigger: CAGGTGGATCACTTGAGTCCAGGAGTTCGAGACTAG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTAAAATTACCTGGGCATaGTGGTACGTGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTKITWA*WYVPVI
Trigger: GATTACAGGCACGTACCACCATGCCCAGGTAATTTT...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CAA 90 bp ACTGATATTATTTCTTCAAAAACATGTTCCATGACCTCGAGTGACTaGCTAAAGCCTAGCAAGTACAGGTCACATTACAGATGTCATTGT +
Preference number: 2 (lower is better)
Translates to: TDIISSKTCSMTSSD*LKPSKYRSHYRCHC
Trigger: ACAATGACATCTGTAATGTGACCTGTACTTGCTAGGCTTTAGCAAGTCACTCGAGGTCATGGAACATGTTTTTGAAGAAATAATATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTTACTATTCTGTGGTGTaGAAAGCACAGGACTTGAGA +
Preference number: 2 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTYYSVV*KAQDLR
Trigger: TCTCAAGTCCTGTGCTTTCCACACCACAGAATAGTA...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCAGTTTACTATTCTGTaGTGTGGAAAGCACAGGACT +
Preference number: 2 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTQFTIL*CGKHRT
Trigger: AGTCCTGTGCTTTCCACACCACAGAATAGTAAACTG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR GCA 72 bp GGGCCAGGGCTGCGATTCTCCAACGGTGCCCACTTCTaGCGGGTGTCAACAAGCCCCAGCCGGCCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: GPGLRFSNGAHF*RVSTSPSRPEA
Trigger: TGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR GCA 72 bp CAGACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTaGCAATGTGGAGAAGACGGCCACCCTAGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: QTSEPRPMEDSG*QCGEDGHPRPE
Trigger: CTCTGGCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
3UTR CCA 72 bp CTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTaGGTCAGGGCTAGGTACGGATACTGGGCACTGGAC +
Preference number: 3 (lower is better)
Translates to: LQAWGPSHSQQL*VRARYGYWALD
Trigger: GTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR GCA 72 bp GTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTaGAGACTTCGGAGCCTCGCCCCATGGAGGACTCCG +
Preference number: 3 (lower is better)
Translates to: VYVVFRDSRSTT*RLRSLAPWRTP
Trigger: CGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
3UTR CCA 72 bp AGCTCTGGGTCAGGGCTAGGTACGGATACTGGGCACTaGACTGAGCTCACAGGATGGCAGAGATCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: SSGSGLGTDTGH*TELTGWQRSRG
Trigger: CCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR CCA 72 bp AGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATaGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCC +
Preference number: 3 (lower is better)
Translates to: RSTTCRLRSLAP*RTPGANVEKTA
Trigger: GGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
3UTR-3UTR CAA 90 bp CTGAGATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTTGTCTGCTCAGCTGGTaGGGTGCTGGTCCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: LRWPSNSSGLGPKSLAAACLLSW*GAGPWD
Trigger: GTCCCAGGGACCAGCACCCAACCAGCTGAGCAGACA...AGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR TCA 72 bp TGGGTCAGGGCTAGGTACGGATACTGGGCACTGGACTaGGCTCACAGGATGGCAGAGATCCCGGGGGTCAAG +
Preference number: 3 (lower is better)
Translates to: WVRARYGYWALD*AHRMAEIPGVK
Trigger: CTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR CCA 72 bp TTGAGGTGGAATCCCAGTGGCAACTCTCCCCCACAATaGACCTCAGAGCAGTGGGAGCGACGCAGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: LRWNPSGNSPPQ*TSEQWERRSPV
Trigger: CACAGGACTGCGTCGCTCCCACTGCTCTGAGGTCCATTGTGGGGGAGAGTTGCCACTGGGATTCCACCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp CAGGGCCAGGGCTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAACTGTCACTGACATCATaGTCTGCTCAGCTGGTTGGG +
Preference number: 3 (lower is better)
Translates to: QGQGCDSPTVPTSAGCQQLSLTS*SAQLVG
Trigger: CCCAACCAGCTGAGCAGACAATGATGTCAGTGACAG...TTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558521.5
3UTR CCA 72 bp GGTACGGATACTGGGCACTGGACTGAGCTCACAGGATaGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGC +
Preference number: 3 (lower is better)
Translates to: GTDTGHWTELTG*QRSRGSRRQRR
Trigger: GCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
3UTR-3UTR CAA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGGAGATGGATGCCCTGTaGAGTCTTGGGGCACTTTCT +
Preference number: 3 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYREMDAL*SLGALS
Trigger: AGAAAGTGCCCCAAGACTCAACAGGGCATCCATCTC...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp TCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACGGAACATCCTTGGCTTaGAGTCAAGTTTTGTTTTGG +
Preference number: 3 (lower is better)
Translates to: SEPRPMEDSGCQCGEDGHGTSLA*SQVLFW
Trigger: CCAAAACAAAACTTGACTCAAAGCCAAGGATGTTCC...GTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR-3UTR CAA 90 bp TCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACCTGAATGGAACATCCTaGGCTTTGAGTCAAGTTTTG +
Preference number: 3 (lower is better)
Translates to: SEPRPMEDSGCQCGEDGHLNGTS*ALSQVL
Trigger: CAAAACTTGACTCAAAGCCAAGGATGTTCCATTCAG...GTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR TCA 72 bp CTGCCATCGAAACCACCAGGTGTACCGGATTATGGCTaGGCAGCTGTGAGAACATGGCTTCCTGTGGACCCT +
Preference number: 3 (lower is better)
Translates to: LPSKPPGVPDYG*AAVRTWLPVDP
Trigger: AGGGTCCACAGGAAGCCATGTTCTCACAGCTGCTCAGCCATAATCCGGTACACCTGGTGGTTTCGATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 72 bp AATAGTGGAGGAGTCTCAAGAGGAATCCTGGAGGCTTaGTCCCCAGGCCTTGAGGTGGAATCCCAGTGGCAA +
Preference number: 3 (lower is better)
Translates to: NSGGVSRGILEA*SPGLEVESQWQ
Trigger: TTGCCACTGGGATTCCACCTCAAGGCCTGGGGACCAAGCCTCCAGGATTCCTCTTGAGACTCCTCCACTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCAAAAGCAAATGTCTCTaGAACCTAGTCACCTGGGGG +
Preference number: 3 (lower is better)
Translates to: QVLIWRKAKTWSELEWQAKSKCL*NLVTWG
Trigger: CCCCCAGGTGACTAGGTTCAAGAGACATTTGCTTTT...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR GCA 72 bp TTCTCAGAGGCCTGGATCCACGAAAAACTCCGCACCTaGCATCGAAACCACCAGGTGTACCGGATTATGGCT +
Preference number: 3 (lower is better)
Translates to: FSEAWIHEKLRT*HRNHQVYRIMA
Trigger: AGCCATAATCCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGCCTCTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTTCCCACCTCAGCCTCTaGAATAGCTGGGACTGCAGG +
Preference number: 3 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPSHLSL*NSWDCR
Trigger: CCTGCAGTCCCAGCTATTCAAGAGGCTGAGGTGGGA...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 72 bp GCCACCAAAAGCAAATGTCTCTTGAACCTAGTCACCTaGGGGGACAAGTGTGGGAAAGTGCACCTGTGTTCC +
Preference number: 3 (lower is better)
Translates to: ATKSKCLLNLVT*GDKCGKVHLCS
Trigger: GGAACACAGGTGCACTTTCCCACACTTGTCCCCCCAGGTGACTAGGTTCAAGAGACATTTGCTTTTGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 72 bp AGGCACTCAGTGCACCCAGTTTACTATTCTGTGGTGTaGAAAGCACAGGACTTGAGAAGCAGGTGGCACCCA +
Preference number: 3 (lower is better)
Translates to: RHSVHPVYYSVV*KAQDLRSRWHP
Trigger: TGGGTGCCACCTGCTTCTCAAGTCCTGTGCTTTCCACACCACAGAATAGTAAACTGGGTGCACTGAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 72 bp TTATTCACTGTGTATCCCCAACACCTGAGGTGTACGTaGTCTTCCGGGACTCCAGATCAACGACCTGCAGAC +
Preference number: 3 (lower is better)
Translates to: LFTVYPQHLRCT*SSGTPDQRPAD
Trigger: GTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTGTTGGGGATACACAGTGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR-3UTR CAA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGTGACGCTGGCAGACTaGCCCAAGGCCACACAGCTG +
Preference number: 3 (lower is better)
Translates to: PTQEEQKSCFAISLIATRVTLAD*PKATQL
Trigger: CAGCTGTGTGGCCTTGGGCAAGTCTGCCAGCGTCAC...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 72 bp TGGAGAAAAAGAGAGTGTGAAAGACTGCTCAGTGGCTaGGGTGAGAGTCAAGTCTGGCCAGGTGCTAATCTG +
Preference number: 3 (lower is better)
Translates to: WRKRECERLLSG*GESQVWPGANL
Trigger: CAGATTAGCACCTGGCCAGACTTGACTCTCACCCCAGCCACTGAGCAGTCTTTCACACTCTCTTTTTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCTCATCGGGGGAAAAATaGGTGACAACTTTAAGAAAT +
Preference number: 3 (lower is better)
Translates to: QVLIWRKAKTWSELEWQASSGEK*VTTLRN
Trigger: ATTTCTTAAAGTTGTCACCAATTTTTCCCCCGATGA...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CCA 72 bp AGATTCAGAAAACGTCCAGTGCAGGTGGGAAATGAATaGGAGCTAGCATTCCACCAACAAAGTCAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: RFRKRPVQVGNE*ELAFHQQSQPW
Trigger: CCAGGGCTGACTTTGTTGGTGGAATGCTAGCTCCCATTCATTTCCCACCTGCACTGGACGTTTTCTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTATGGAAAGCACAGGACTaGAGAAGCAGGTGGCACCCA +
Preference number: 3 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLWKAQD*RSRWHP
Trigger: TGGGTGCCACCTGCTTCTCAAGTCCTGTGCTTTCCA...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp GTGTATCCCCAACACCTGAGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGAACATTACAGATGTCATaGTCTTGTAAGGTGGACAAG +
Preference number: 3 (lower is better)
Translates to: VYPQHLRCTWSSGTPDQRTLQMS*SCKVDK
Trigger: CTTGTCCACCTTACAAGACAATGACATCTGTAATGT...TCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTGTTGGGGATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR TCA 72 bp AAGGAGATTCAGAAAACGTCCAGTGCAGGTGGGAAATaGATGGGAGCTAGCATTCCACCAACAAAGTCAGCC +
Preference number: 3 (lower is better)
Translates to: KEIQKTSSAGGK*MGASIPPTKSA
Trigger: GGCTGACTTTGTTGGTGGAATGCTAGCTCCCATTCATTTCCCACCTGCACTGGACGTTTTCTGAATCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR TCA 72 bp GCACCAGTGTCTTCTATGATGAGATGGATGCCCTGTTaGGTCTTGGGGCACTTTCTAACACCTTTGATGCCT +
Preference number: 3 (lower is better)
Translates to: APVSSMMRWMPC*VLGHFLTPLMP
Trigger: AGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAGGGCATCCATCTCATCATAGAAGACACTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR TCA 72 bp GAATCAGGAGATGTGATTATTGTCCTGGCTCTGTTATaGCTAATTTGGGTCTGGAATGGCCTCATCGGGGGA +
Preference number: 3 (lower is better)
Translates to: ESGDVIIVLALL*LIWVWNGLIGG
Trigger: TCCCCCGATGAGGCCATTCCAGACCCAAATTAGTCATAACAGAGCCAGGACAATAATCACATCTCCTGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGTCCTCAAATATTGCTaGACTCAACCCTCTACTGAA +
Preference number: 3 (lower is better)
Translates to: LLSLGALSNTFDALEVVGVLKYC*TQPSTE
Trigger: TTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGAC...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR-3UTR CAA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTACCACTTTGAGGCTCTaGCTCTGCTCTTTAGCCAAG +
Preference number: 3 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTTTLRL*LCSLAK
Trigger: CTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGT...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR TCA 72 bp GTCATTAAACTTTCTCTTCTGGGAACTAGACCTTCTTaGGAGGCACTATCATTCTCATTTCACCTGTCACTT +
Preference number: 3 (lower is better)
Translates to: VIKLSLLGTRPS*EALSFSFHLSL
Trigger: AAGTGACAGGTGAAATGAGAATGATAGTGCCTCTCAAGAAGGTCTAGTTCCCAGAAGAGAAAGTTTAATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR GCA 72 bp TTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTaGTTGACTCAACCCTCTACTGAACCAGTAGTCCAG +
Preference number: 3 (lower is better)
Translates to: FKKYCLYPVLKY*LTQPSTEPVVQ
Trigger: CTGGACTACTGGTTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACATCTGAGCCAAGGCTaGCAATGCTGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FGASPHGGLRVPMWRRRPHLSQG*QCWAQG
Trigger: GCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATG...TGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS-3UTR GCA 90 bp CTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACCCTAGGCATGGAGGACTCCGGGTaGCAATGTGGAGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: LAPWRTPGANVEKTATLGMEDSG*QCGEDG
Trigger: GCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCAT...GCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
CDS-3UTR GCA 90 bp CGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTAACGGTGCCCACTTCTaGCGGGTGTCAACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RFSNGAHFCRVSTSPSRPNGAHF*RVSTSP
Trigger: GGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTT...AGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR GCA 90 bp GCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTGAAGCACAGCAGAAGGCGATTCTCCAACGGTaGCCACTTCTGCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AHFCRVSTSPSRPEAQQKAILQR*PLLPGV
Trigger: GACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGC...CTTCTGCTGTGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp TACGTGGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCGGAGCCTCGCCCCATaGAGGACTCCGGGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: YVVFRDSRSTTCRLRSLARSLAP*RTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCG...GGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
CDS-3UTR CCA 90 bp GGGCTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCACTCGCAGCAGCTCTaGGTCAGGGCTAGGTACGGA +
Preference number: 4 (lower is better)
Translates to: GLRFSNGAHFCRVSTSPSHSQQL*VRARYG
Trigger: TCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTG...GCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR TCA 90 bp CCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTGAAGCACTGTATCCCCAACACCTaGGGTGTACGTGGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PTVPTSAGCQQAPAGLKHCIPNT*GVRGLP
Trigger: CGGAAGACCACGTACACCTCAGGTGTTGGGGATACA...GTGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR GCA 90 bp GTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATGGGCGATTCTCCAACGGTaGCCACTTCTGCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VFRDSRSTTCRLRSLAPWAILQR*PLLPGV
Trigger: GACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGC...CCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS-3UTR GCA 90 bp CAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGGGTCAGGGCTCAGCTGGTTGGGTaGTGGTCCCTGGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: QAILQAWGPSHSQQLWVRAQLVG*WSLGLP
Trigger: AGGCAGTCCCAGGGACCAGCACCCAACCAGCTGAGC...CCTGACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR CCA 90 bp ACTCGCAGCAGCTCTGGGTCAGGGCTAGGTACGGATACTGGGCACTGGACTGAGCATCTGAGCCAAGGCTaGCAATGCTGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TRSSSGSGLGTDTGHWTEHLSQG*QCWAQG
Trigger: GCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATG...CTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp CTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGGCAATTCTTCAGGCCTaGGGCCCAAGTCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: LRFSNGAHFCRVSTSPSRAILQA*GPSHSQ
Trigger: CTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGC...CCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGACAGGAGAAATCCCCTaGCCGGGCGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRTGEIP*PGAVAH
Trigger: GTGAGCCACCGCGCCCGGCCAGGGGATTTCTCCTGT...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GGGCTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCAGCTGGTTGGGTGCTaGTCCCTGGGACTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: GLRFSNGAHFCRVSTSPSQLVGC*SLGLPN
Trigger: ATTAGGCAGTCCCAGGGACCAGCACCCAACCAGCTG...GCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR CCA 90 bp TCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTGAAGCACATTGTCTGCTCAGCTaGTTGGGTGCTGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SNGAHFCRVSTSPSRPEAHCLLS*LGAGPW
Trigger: CCAGGGACCAGCACCCAACCAGCTGAGCAGACAATG...TGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR TCA 90 bp GTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATGGTCTGCCTCAGCCTCCTaGGTAGCACTGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VFRDSRSTTCRLRSLAPWSASAS*VALSSA
Trigger: TGCAGAGGACAGTGCTACTCAGGAGGCTGAGGCAGA...CCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR GCA 90 bp TGGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATAACGGTGCCCACTTCTaGCGGGTGTCAACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WSSGTPDQRPADFGASPHNGAHF*RVSTSP
Trigger: GGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTT...ATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS-3UTR CCA 90 bp CGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGCCTACGGATACTGGGCACTaGACTGAGCTCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: RFSNGAHFCRVSTSPSRPTDTGH*TELTGW
Trigger: CCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGT...AGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR GCA 90 bp CCAGGGCCAGGGCTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACATCTGCATCTAGGACCTaGAGGCTACTCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGPGLRFSNGAHFCRVSTSASRT*RLLSSS
Trigger: TGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGA...TGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR GCA 90 bp GTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATGGACAATCTCAGCTCACTaGAGCCTCCGCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VFRDSRSTTCRLRSLAPWTISAH*SLRLSG
Trigger: ACCTGAGAGGCGGAGGCTGCAGTGAGCTGAGATTGT...CCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR CCA 90 bp ACTCGCAGCAGCTCTGGGTCAGGGCTAGGTACGGATACTGGGCACTGGACTGAGACTGAGCTCACAGGATaGCAGAGATCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TRSSSGSGLGTDTGHWTETELTG*QRSRGS
Trigger: TGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGT...CTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp GGTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCACTCGCAGCAGCTCTaGGTCAGGGCTAGGTACGGA +
Preference number: 4 (lower is better)
Translates to: GVRGLPGLQINDLQTSEPHSQQL*VRARYG
Trigger: TCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTG...AGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS-3UTR CCA 90 bp CAGGGCCAGGGCTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAACACCTGAGGTGTACGTaGTCTTCCGGGACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QGQGCDSPTVPTSAGCQQHLRCT*SSGTPD
Trigger: ATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTG...TTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR TCA 90 bp GAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACCCTAAAGATAGACCTGTCTaGAAATCCTCCATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: EPRPMEDSGCQCGEDGHPKDRPV*KSSMAH
Trigger: GTGCGCCATGGAGGATTTTCAGACAGGTCTATCTTT...AGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR TCA 90 bp ATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGGGGCTCCTCACTGTCACTaGCATCTGAGGTGTACGTGG +
Preference number: 4 (lower is better)
Translates to: MAKQFFRPGAQVTRSSSGAPHCH*HLRCTW
Trigger: CCACGTACACCTCAGATGTCAGTGACAGTGAGGAGC...CCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS-3UTR CCA 90 bp CAGGCTACTCAGCTCCTCACTGTCACTGACATCATTGTCTGCTCAGCTGGTTGGCGGAGCCTCGCCCCATaGAGGACTCCGGGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: QATQLLTVTDIIVCSAGWRSLAP*RTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCG...CCAACCAGCTGAGCAGACAATGATGTCAGTGACAGTGAGGAGCTGAGTAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR CCA 90 bp GAGATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGCAATTCTTCAGGCCTaGGGCCCAAGTCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: EMAKQFFRPGAQVTRSSSAILQA*GPSHSQ
Trigger: CTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGC...AGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp TCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATCTGAGCTTGGGTGCTGGTCCCTaGGACTGCCTAATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SQDGRDPGGQEDKDAHLSLGAGP*DCLILP
Trigger: GGGCAGGATTAGGCAGTCCCAGGGACCAGCACCCAA...GCTCAGATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR TCA 90 bp CTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACAAGCCCCAGCCGGAAAGATAGACCTGTCTaGAAATCCTCCATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LRFSNGAHFCRVSTSPSRKDRPV*KSSMAH
Trigger: GTGCGCCATGGAGGATTTTCAGACAGGTCTATCTTT...CCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR TCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCCCCACCTCAGCCTCTTaGATAGCTGGGACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPAPTSAS*IAGTAG
Trigger: GCCTGCAGTCCCAGCTATTCAAGAGGCTGAGGTGGG...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCCCATGGTGCCCAGGCTaGTCTCGAACTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPAPWCPG*SRTPPG
Trigger: TCCAGGAGGAGTTCGAGATCAGCCTGGGCACCATGG...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp ATACTGGGCACTGGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAATGGAGGACTCCGGGTaGCAATGTGGAGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: ILGTGLSSQDGRDPGGQEMEDSG*QCGEDG
Trigger: GCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCAT...TTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR GCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCACAAAGTCCTTGGTCTaGAGGGATGCCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QVLIWRKAKTWSELEWQATKSLV*RDARCG
Trigger: CCCACACCTGGCATCCCTGCAGACCAAGGACTTTGT...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATGGATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATG +
Preference number: 4 (lower is better)
Translates to: VFRDSRSTTCRLRSLAPWIQGLE*LLTGRM
Trigger: CATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAAT...CCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
CDS-3UTR CCA 90 bp ACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCAACTGAGCTCACAGGATaGCAGAGATCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TELTGWQRSRGSRRQRRPTELTG*QRSRGS
Trigger: TGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGT...TGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp GGGCTAGGTACGGATACTGGGCACTGGACTGAGCTCACAGGATGGCAGAGATCCACGGATACTGGGCACTaGACTGAGCTCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: GLGTDTGHWTELTGWQRSTDTGH*TELTGW
Trigger: CCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGT...GGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp GTGTATCCCCAACACCTGAGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGATTGGGTGCTGGTCCCTaGGACTGCCTAATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VYPQHLRCTWSSGTPDQRLGAGP*DCLILP
Trigger: GGGCAGGATTAGGCAGTCCCAGGGACCAGCACCCAA...TCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTGTTGGGGATACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR CAA 72 bp TCTCAAGAGGAATCCTGGAGGCTTGGTCCCCAGGCCTaGAGGTGGAATCCCAGTGGCAACTCTCCCCCACAA +
Preference number: 4 (lower is better)
Translates to: SQEESWRLGPQA*RWNPSGNSPPQ
Trigger: TTGTGGGGGAGAGTTGCCACTGGGATTCCACCTCAAGGCCTGGGGACCAAGCCTCCAGGATTCCTCTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATACAAAGACGCCCATCTaGGCCAAGGCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: LSSQDGRDPGGQEDKDAHTKTPI*AKAGNA
Trigger: AGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTGT...ATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR TCA 90 bp ACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCAACAAAGACGCCCATCTaGGCCAAGGCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: TELTGWQRSRGSRRQRRPTKTPI*AKAGNA
Trigger: AGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTGT...TGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR TCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCCATTGCTTGAACCCATaGGGTGGAGGTTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QVLIWRKAKTWSELEWQAHCLNP*GGGCSE
Trigger: CTCACTGCAACCTCCACCTCATGGGTTCAAGCAATG...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCATGGAGGACTCCGGGTaGCAATGTGGAGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPAMEDSG*QCGEDG
Trigger: GCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCAT...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp AGGCAAAGGTGTCTGCATCTAGGACCTGCAGGCTACTCAGCTCCTCACTGTCACATGGAGGACTCCGGGTaGCAATGTGGAGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: RQRCLHLGPAGYSAPHCHMEDSG*QCGEDG
Trigger: GCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCAT...GTGACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACACCTTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR GCA 90 bp GAGATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTTCTGCATCTAGGACCTaGAGGCTACTCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EMAKQFFRPGAQVTRSSSSASRT*RLLSSS
Trigger: TGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGA...AGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR GCA 90 bp ATGGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCAGCTCTGGGACTGACATCATTGTCTaGTCAGCTGGTTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MAKQFFRPGAQVTRSSSGTDIIV*SAGWVL
Trigger: CAGCACCCAACCAGCTGAGCAGACAATGATGTCAGT...CCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR CCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGCATCTGAGGTGTACGTaGTCTTCCGGGACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRHLRCT*SSGTPD
Trigger: ATCTGGAGTCCCGGAAGACCACGTACACCTCAGATG...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp AGAAGGCAAAGGTGTCTGCATCTAGGACCTGCAGGCTACTCAGCTCCTCACTGTGTCTGCTCAGCTGGTTaGGTGCTGGTCCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RRQRCLHLGPAGYSAPHCVCSAG*VLVPGT
Trigger: AGTCCCAGGGACCAGCACCCAACCAGCTGAGCAGAC...ACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACACCTTTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR TCA 90 bp ACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCAGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAA +
Preference number: 4 (lower is better)
Translates to: TELTGWQRSRGSRRQRRPDSSGS*QVECIE
Trigger: TTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTC...TGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR TCA 90 bp TGGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCGCTCCTCACTGTCACTaGCATCATTGTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WTELTGWQRSRGSRRQRRAPHCH*HHCLLS
Trigger: GCTGAGCAGACAATGATGTCAGTGACAGTGAGGAGC...GCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR CCA 90 bp GTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATG +
Preference number: 4 (lower is better)
Translates to: VYVVFRDSRSTTCRLRSLIQGLE*LLTGRM
Trigger: CATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAAT...GAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
CDS-3UTR CCA 90 bp ATACTGGGCACTGGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAACATCTGAGGTGTACGTaGTCTTCCGGGACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ILGTGLSSQDGRDPGGQEHLRCT*SSGTPD
Trigger: ATCTGGAGTCCCGGAAGACCACGTACACCTCAGATG...TTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS-3UTR CCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCACGGATACTGGGCACTaGACTGAGCTCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPATDTGH*TELTGW
Trigger: CCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGT...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCACCAGTAGTCCAGGGTaGCTCACAAAGACCACTTTG +
Preference number: 4 (lower is better)
Translates to: QVLIWRKAKTWSELEWQATSSPG*LTKTTL
Trigger: CAAAGTGGTCTTTGTGAGCCACCCTGGACTACTGGT...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCAGGTGTACCGGATTATaGCTGAGCAGCTGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: QVLIWRKAKTWSELEWQARCTGL*LSSCEN
Trigger: GTTCTCACAGCTGCTCAGCCATAATCCGGTACACCT...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GTGTATCCCCAACACCTGAGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGAGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAA +
Preference number: 4 (lower is better)
Translates to: VYPQHLRCTWSSGTPDQRDSSGS*QVECIE
Trigger: TTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTC...TCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTGTTGGGGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR TCA 90 bp AGCAGAAGGCAAAGGTGTCTGCATCTAGGACCTGCAGGCTACTCAGCTCCTCACGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAA +
Preference number: 4 (lower is better)
Translates to: SRRQRCLHLGPAGYSAPHDSSGS*QVECIE
Trigger: TTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTC...GTGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACACCTTTGCCTTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR GCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCGAACCAGGCACTCAGTaGACCCAGTTTACTATTCTG +
Preference number: 4 (lower is better)
Translates to: QVLIWRKAKTWSELEWQAEPGTQ*TQFTIL
Trigger: CAGAATAGTAAACTGGGTGCACTGAGTGCCTGGTTC...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp ACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATCTGAGCCAATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATG +
Preference number: 4 (lower is better)
Translates to: TGWQRSRGSRRQRRPSEPIQGLE*LLTGRM
Trigger: CATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAAT...TGGCTCAGATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CCA 90 bp GCCCTTAGAGGCCAGGGCTTACCTCTTATTCACTGTGTATCCCCAACACCTGAGCACCTGAGGTGTACGTaGTCTTCCGGGACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ALRGQGLPLIHCVSPTPEHLRCT*SSGTPD
Trigger: ATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTG...CTCAGGTGTTGGGGATACACAGTGAATAAGAGGTAAGCCCTGGCCTCTAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
3UTR CAA 72 bp AGTCCAGGGTGGCTCACAAAGACCACTTTGAGGCTCTaGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPGWLTKTTLRL*LCSLAKESPFL
Trigger: CAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTCTTTGTGAGCCACCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGGGAACTAGACCTTCTTaGGAGGCACTATCATTCTCA +
Preference number: 4 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRGTRPS*EALSFS
Trigger: TGAGAATGATAGTGCCTCTCAAGAAGGTCTAGTTCC...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGACACTCGCAGCAGCTCTaGGTCAGGGCTAGGTACGGA +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGHSQQL*VRARYG
Trigger: TCCGTACCTAGCCCTGACCCAGAGCTGCTGCGAGTG...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTTGAACCTAGTCACCTaGGGGGACAAGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPALNLVT*GDKCGK
Trigger: TTTCCCACACTTGTCCCCCCAGGTGACTAGGTTCAA...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTGGTTTCTACCTCCCTaGGCTGTTATGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPAWFLPP*AVMRIL
Trigger: CAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCA...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTCCCCAGGCCTTGAGGTaGAATCCCAGTGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPPQALR*NPSGNS
Trigger: AGAGTTGCCACTGGGATTCCACCTCAAGGCCTGGGG...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATGGCATTGTCTTGTAAGGTaGACAAGAAAGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: VFRDSRSTTCRLRSLAPWHCLVR*TRKSTS
Trigger: AGATGTGGACTTTCTTGTCCACCTTACAAGACAATG...CCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR TCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGTCCATAGGCCCAAAGTaGACTCCCACGTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVASIGPK*TPTWSR
Trigger: CCTACTCCACGTGGGAGTTCACTTTGGGCCTATGGA...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGGAGGTGGAATCCCAGTaGCAACTCTCCCCCACAATG +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVAEVESQ*QLSPTM
Trigger: CATTGTGGGGGAGAGTTGCCACTGGGATTCCACCTC...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCCAGGTGTGGGTGGTaGCCAAAGGAGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRARCGW*PKEQGP
Trigger: TGGACCCTGCTCCTTTGGTCACCACCCACACCTGGC...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGAAACTGAGGCTAAGTaGCGCTGGCAGACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGETEAK*RWQTCP
Trigger: TGGGCAAGTCTGCCAGCGTCACTTAGCCTCAGTTTC...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAGCACTGGTTAAGGGCTaGGGGGAACCAGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLALVKG*GEPGTQ
Trigger: CTGAGTGCCTGGTTCCCCTCAGCCCTTAACCAGTGC...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGTACCGGATTATGGCTaGGCAGCTGTGAGAACATGG +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPVPDYG*AAVRTW
Trigger: CCATGTTCTCACAGCTGCTCAGCCATAATCCGGTAC...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GGTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCCTGAACATCCTTGGCTTTaGGTCAAGTTTTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GVRGLPGLQINDLQTSEPEHPWL*VKFCFG
Trigger: ACCAAAACAAAACTTGACTCAAAGCCAAGGATGTTC...AGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR GCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAGCGATTCTCCAACGGTaGCCACTTCTGCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLAILQR*PLLPGV
Trigger: GACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGC...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGACTCCTGACCGACTACTaGAAAGCCAGGAGCACCTAC +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGLLTDY*KARSTY
Trigger: GTAGGTGCTCCTGGCTTTGCAGTAGTCGGTCAGGAG...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCCAACAAAGTCAGCCCTaGGATTCTAAACTCGGACAA +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPAQQSQP*DSKLGQ
Trigger: TTGTCCGAGTTTAGAATCCCAGGGCTGACTTTGTTG...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCAATTTGGGTCTGGAATaGCCTCATCGGGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPANLGLE*PHRGKN
Trigger: ATTTTTCCCCCGATGAGGCCATTCCAGACCCAAATT...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAAGCGACGCAGTCCTGTaGGAAGCATTCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGSDAVL*EAFRLR
Trigger: TCTGAGCCTGAATGCTTCCCACAGGACTGCGTCGCT...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAAGACTGCTCAGTGGCTaGGGTGAGAGTCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGRLLSG*GESQVW
Trigger: CCAGACTTGACTCTCACCCCAGCCACTGAGCAGTCT...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTTGTGACCTCTGTGAGTaGAGAGAGGTTCTACTTGGC +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPCDLCE*REVLLG
Trigger: GCCAAGTAGAACCTCTCTTCACTCACAGAGGTCACA...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTCCTCCTGCTTTTCTCTaGGCAGGACTTCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCPPAFL*AGLPVP
Trigger: GGGAACTGGAAGTCCTGCTCAGAGAAAAGCAGGAGG...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGTTGGTCCCCAGGCCTTaGGGTGGAATCCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRLVPRP*GGIPVA
Trigger: TGCCACTGGGATTCCACCTCAAGGCCTGGGGACCAA...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGGGTTCAAAAACCTCCTaGCCGACTACTGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVAGSKTS*PTTAKP
Trigger: TGGCTTTGCAGTAGTCGGTCAGGAGGTTTTTGAACC...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTATGGCTGAGCAGCTGTaGGAACATGGCTTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCMAEQL*EHGFLW
Trigger: CCACAGGAAGCCATGTTCTCACAGCTGCTCAGCCAT...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TGTTCCATGACCTCGAGTGACTTGCTAAAGCCTAGCAAGTACAGGTCACATTACTGTATCCCCAACACCTaGGGTGTACGTGGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: CSMTSSDLLKPSKYRSHYCIPNT*GVRGLP
Trigger: CGGAAGACCACGTACACCTCAGGTGTTGGGGATACA...GTAATGTGACCTGTACTTGCTAGGCTTTAGCAAGTCACTCGAGGTCATGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR GCA 90 bp TATGATAGTGTGAAGACAGGGACAAAACGCTACCATTTCACACTCCCAGATCTAAACGGTGCCCACTTCTaGCGGGTGTCAACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: YDSVKTGTKRYHFTLPDLNGAHF*RVSTSP
Trigger: GGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTT...TAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATG +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPIQGLE*LLTGRM
Trigger: CATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAAT...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCGTGAGCCACTGTGCCTaGTCTATCTTTAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPAVSHCA*SIFKFL
Trigger: TAGGAATTTAAAGATAGACCAGGCACAGTGGCTCAC...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTGTCACTTCCAGACATaGGAGCAGAAAGTGAATTTC +
Preference number: 4 (lower is better)
Translates to: DHFEALALLFSQGVSLPACHFQT*EQKVNF
Trigger: GAAATTCACTTTCTGCTCCCATGTCTGGAAGTGACA...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCTTAAACTTTCTCTTCTaGGAACTAGACCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QVLIWRKAKTWSELEWQALNFLF*ELDLLE
Trigger: CTCAAGAAGGTCTAGTTCCCAGAAGAGAAAGTTTAA...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGTGGACCTCAGAGCAGTaGGAGCGACGCAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRWTSEQ*ERRSPV
Trigger: CACAGGACTGCGTCGCTCCCACTGCTCTGAGGTCCA...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGCTTCCTGTGGACCCTaGAGCAATGTTGCTATCGGT +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGASCGP*SNVAIG
Trigger: ACCGATAGCAACATTGCTCCAGGGTCCACAGGAAGC...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGTGGAGTGGCAGGCCCTaGAGGATGAGAAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRWSGRP*RMRRWQ
Trigger: CTGCCACCTTCTCATCCTCCAGGGCCTGCCACTCCA...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGGCCAGGTGCTAATCTaGAGAAAAGCCAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGGQVLI*RKAKTW
Trigger: CCAGGTCTTGGCTTTTCTCCAGATTAGCACCTGGCC...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAACAAAGACGCCCATCTaGGCCAAGGCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLTKTPI*AKAGNA
Trigger: AGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTGT...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TATGATAGTGTGAAGACAGGGACAAAACGCTACCATTTCACACTCCCAGATCTACCTGCCTCACCCTCCTaGGTAGTGGGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: YDSVKTGTKRYHFTLPDLPASPS*VVGITG
Trigger: ACCTGTAATCCCCACTACTCAGGAGGGTGAGGCAGG...TAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGGAAAGCACAGGACTTaGGAAGCAGGTGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRGKHRT*EAGGTQ
Trigger: CTGGGTGCCACCTGCTTCTCAAGTCCTGTGCTTTCC...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGAGAAAAAGAGAGTGTaGAAGACTGCTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPEKKRV*KTAQWL
Trigger: CAGCCACTGAGCAGTCTTTCACACTCTCTTTTTCTC...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTTCTGCATCTAGGACCTaGAGGCTACTCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCSASRT*RLLSSS
Trigger: TGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGA...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGTCAGAAAACGTCCAGTaGAGGTGGGAAATGAATGGG +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVASENVQ*RWEMNG
Trigger: CCCATTCATTTCCCACCTGCACTGGACGTTTTCTGA...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCAGATGGGGTCACAATaGTGCAGAAAAGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVAQMGSQ*CRKVKS
Trigger: GCTCTTCACTTTTCTGCAGCATTGTGACCCCATCTG...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGTTGAGGCTCTTGCTCTaGTCTTTAGCCAAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVALRLLL*SLAKES
Trigger: AGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAA...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTGAAAAACTCCGCACCTaGCATCGAAACCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCEKLRT*HRNHQV
Trigger: CACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTC...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGACTGCAGATAACAACCTaGAAGGCCACTGGTAACCAG +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGLQITT*KATGNQ
Trigger: CTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAG...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGACTGAGCTCACAGGATaGCAGAGATCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRTELTG*QRSRGS
Trigger: TGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGT...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCAATTCTTCAGGCCTaGGGCCCAAGTCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRAILQA*GPSHSQ
Trigger: CTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGC...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TATGATAGTGTGAAGACAGGGACAAAACGCTACCATTTCACACTCCCAGATCTACAGGGATGCCAGGTGTaGGTGGTGACCAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: YDSVKTGTKRYHFTLPDLQGCQV*VVTKGA
Trigger: TGCTCCTTTGGTCACCACCCACACCTGGCATCCCTG...TAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTATTCGGGAGGCCGAGGTaGGTAGATCACAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLFGRPR*VDHKVK
Trigger: CTTGACCTTGTGATCTACCCACCTCGGCCTCCCGAA...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTTGGAGCGAGCTGGAGTaGCAGGCCCTGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: EQKSCFAISLIATRAGIFWSELE*QALEDE
Trigger: CTCATCCTCCAGGGCCTGCCACTCCAGCTCGCTCCA...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAA +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLDSSGS*QVECIE
Trigger: TTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTC...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTCTCCATGGCGCACTTTaGAATCTCTTTCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPLHGAL*NLFLGI
Trigger: TATTCCCAGAAAGAGATTTCAAAGTGCGCCATGGAG...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGATCACAAAGACCACTTTaGGGCTCTTGCTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLSLGALSNTFDALEVVGSQRPL*GSCSAL
Trigger: AAGAGCAGAGCAAGAGCCTCAAAGTGGTCTTTGTGA...TCCTACCACCTCTAAGGCATCAAAGGTGTTAGAAAGTGCCCCAAGACTCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCGGAGCCTCGCCCCATaGAGGACTCCGGGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTRSLAP*RTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TATGATAGTGTGAAGACAGGGACAAAACGCTACCATTTCACACTCCCAGATCTAAACTCTCCCCCACAATaGACCTCAGAGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: YDSVKTGTKRYHFTLPDLNSPPQ*TSEQWE
Trigger: CTCCCACTGCTCTGAGGTCCATTGTGGGGGAGAGTT...TAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGTGTACCATCAAAACCTaGGATGGCCAAGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVACTIKT*DGQAIL
Trigger: AAGAATTGCTTGGCCATCTCAGGTTTTGATGGTACA...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTTGGAATACAGTGGCATaGTCACAGCTCACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCWNTVA*SQLTAN
Trigger: GTTTGCAGTGAGCTGTGATCATGCCACTGTATTCCA...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTTCCAGATCAACGACCTaGAGACTTCGGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: EQKSCFAISLIATRAGIFSRSTT*RLRSLA
Trigger: GGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGA...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGTCCCTTTTGTCTGCCTaGAAACAGATTTTCCAATCC +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVASLLSA*KQIFQS
Trigger: GGATTGGAAAATCTGTTTGCAGGCAGACAAAAGGGA...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTCATCTCCCTTTTGTCTaGCTGCAAACAGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPHLPFV*LQTDFP
Trigger: TGGAAAATCTGTTTGCAGGCAGACAAAAGGGAGATG...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCATCTGAGCCAAGGCTaGCAATGCTGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTHLSQG*QCWAQG
Trigger: GCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTACTCCTGGACTCAAGTaGTCCACCTGTCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EQKSCFAISLIATRAGIFTPGLK*STCLGC
Trigger: GCAGCCAAGACAGGTGGATCACTTGAGTCCAGGAGT...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTCAAGTAATTATGCCATaGGTTTCTTCTAACCTTCGC +
Preference number: 4 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPQVIMP*VSSNLR
Trigger: GCGAAGGTTAGAAGAAACGCATGGCATAATTACTTG...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAACAAGTGTGGGAAAGTaGACCTGTGTTCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLTSVGK*TCVPMR
Trigger: TCTCATGGGAACACAGGTGCACTTTCCCACACTTGT...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTCATCAAAACCTGAGATaGCCAAGCAATTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCHQNLR*PSNSSG
Trigger: GCCTGAAGAATTGCTTGGCCATCTCAGGTTTTGATG...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGAAAGATAGACCTGTCTaGAAATCCTCCATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRKDRPV*KSSMAH
Trigger: GTGCGCCATGGAGGATTTTCAGACAGGTCTATCTTT...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGCTCCCTATGATAGTGTaGAGACAGGGACAAAACGCT +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRLPMIV*RQGQNA
Trigger: AGCGTTTTGTCCCTGTCTTCACACTATCATAGGGAG...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTCAGTTTACTATTCTGTaGTGTGGAAAGCACAGGACT +
Preference number: 4 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCQFTIL*CGKHRT
Trigger: AGTCCTGTGCTTTCCACACCACAGAATAGTAAACTG...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCCCTGGCATATAAAATaGTTGGGATTAGATTTACCA +
Preference number: 4 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVAPWHIK*LGLDLP
Trigger: TGGTAAATCTAATCCCAACCATTTTATATGCCAGGG...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CAA 72 bp AGATGTGATTATTGTCCTGGCTCTGTTATGACTAATTaGGGTCTGGAATGGCCTCATCGGGGGAAAAATTGG +
Preference number: 4 (lower is better)
Translates to: RCDYCPGSVMTN*GLEWPHRGKNW
Trigger: CCAATTTTTCCCCCGATGAGGCCATTCCAGACCCAAATTAGTCATAACAGAGCCAGGACAATAATCACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTGCTCCTCACTGTCACTaGCATCTGAGGTGTACGTGG +
Preference number: 4 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTAPHCH*HLRCTW
Trigger: CCACGTACACCTCAGATGTCAGTGACAGTGAGGAGC...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp TATGATAGTGTGAAGACAGGGACAAAACGCTACCATTTCACACTCCCAGATCTACAGAATCAGGAGATGTaGTTATTGTCCTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YDSVKTGTKRYHFTLPDLQNQEM*LLSWLC
Trigger: ACAGAGCCAGGACAATAATCACATCTCCTGATTCTG...TAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTAGATGGATGCCCTGTTaGGTCTTGGGGCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: EQKSCFAISLIATRAGIFRWMPC*VLGHFL
Trigger: TAGAAAGTGCCCCAAGACTCAACAGGGCATCCATCT...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTTCAGCTCAAGCAATCTaGCCACCTCAGCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: EQKSCFAISLIATRAGIFSAQAI*PPQPLK
Trigger: TTTCAGAGGCTGAGGTGGGCAGATTGCTTGAGCTGA...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGAAAATTACCTGGGCATaGTGGTACGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRKITWA*WYVPVI
Trigger: GATTACAGGCACGTACCACCATGCCCAGGTAATTTT...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTATACTATTCTGTGGTGTaGAAAGCACAGGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLYYSVV*KAQDLR
Trigger: TCTCAAGTCCTGTGCTTTCCACACCACAGAATAGTA...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGCATAGATGTGAACCCTaGGTAGATTATACACACCAG +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRHRCEP*VDYTHQ
Trigger: CTGGTGTGTATAATCTACGCAGGGTTCACATCTATG...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCTCCGTGTTCCATCTTaGCTCCGTGTTCCATCCCAA +
Preference number: 4 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTLRVPS*LRVPSQ
Trigger: TTGGGATGGAACACGGAGCCAAGATGGAACACGGAG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTAAGAGAGGTTCTACTTaGCTCCGTGTTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: EQKSCFAISLIATRAGIFKRGST*LRVPSW
Trigger: CCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTT...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TATGATAGTGTGAAGACAGGGACAAAACGCTACCATTTCACACTCCCAGATCTAAATACAAAAATTACCTaGGCATGGTGGTACGTGCCT +
Preference number: 4 (lower is better)
Translates to: YDSVKTGTKRYHFTLPDLNTKIT*AWWYVP
Trigger: AGGCACGTACCACCATGCCCAGGTAATTTTTGTATT...TAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp TATGATAGTGTGAAGACAGGGACAAAACGCTACCATTTCACACTCCCAGATCTACTCCATTTTCTCATCTaGACAGTGGACATTGTGATG +
Preference number: 4 (lower is better)
Translates to: YDSVKTGTKRYHFTLPDLLHFLI*TVDIVM
Trigger: CATCACAATGTCCACTGTCCAGATGAGAAAATGGAG...TAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACTATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CAA 72 bp AAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTaGACTCAACCCTCTACTGAACCAGTAGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KKYCLYPVLKYC*TQPSTEPVVQG
Trigger: ACCCTGGACTACTGGTTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR TCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCCACGTGGAGTAGGATaGAAACCCACAGCATCTAGA +
Preference number: 4 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTPRGVG*KPTASR
Trigger: TCTAGATGCTGTGGGTTTTCATCCTACTCCACGTGG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTATCTCGAACTCCTCCTaGACTCAAGCTATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTISNSS*TQAILP
Trigger: TGGGAGGATAGCTTGAGTCCAGGAGGAGTTCGAGAT...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTATTATACACACCAGTCTaGCATTTAAAAGGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLLYTPV*HLKGLL
Trigger: CAACAAACCTTTTAAATGGCAGACTGGTGTGTATAA...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
3UTR CAA 72 bp ATTTCTTCAAAAACATGTTCCATGACCTCGAGTGACTaGCTAAAGCCTAGCAAGTACAGGTCACATTACAGA +
Preference number: 4 (lower is better)
Translates to: ISSKTCSMTSSD*LKPSKYRSHYR
Trigger: TCTGTAATGTGACCTGTACTTGCTAGGCTTTAGCAAGTCACTCGAGGTCATGGAACATGTTTTTGAAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR GCA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCAGAAATCCTGTTTTaGTATTTCCTTAATTGCTAC +
Preference number: 4 (lower is better)
Translates to: PTQEEQKSCFAISLIATRAEILF*YFLNCY
Trigger: GTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGC...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR GCA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCCCGTCCTCAAATATTaGTTGACTCAACCCTCTACT +
Preference number: 4 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTPVLKY*LTQPST
Trigger: AGTAGAGGGTTGAGTCAAGCAATATTTGAGGACGGG...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CCA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTAAGGTTTGTTGTTCTTaGGCAACCTCTTTAAATACC +
Preference number: 4 (lower is better)
Translates to: EQKSCFAISLIATRAGIFKVCCS*ATSLNT
Trigger: GGTATTTAAAGAGGTTGCCCAAGAACAACAAACCTT...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS GCA 90 bp GCCCCGAGGCCACAGCTGGCCCACTCTGCACCAGGATCCCCAACGTaGCTCCACCCACACCCATCCGCCCGCCAGGCAAGCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: APRPQLAHSAPGSPT*LHPHPSARQASSRP
Trigger: GGGCCTGGAGCTTGCCTGGCGGGCGGATGGGTGTGGGTGGAGGCACGTTGGGGATCCTGGTGCAGAGTGGGCCAGCTGTGGCCTCGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000559126.5
ENST00000559452.5
ENST00000560182.5
ENST00000560966.5
ENST00000561447.5
CDS-3UTR CAA 90 bp CCAGGGCCAGGGCTGCGATTCTCCAACGGTGCCCACTTCTGCCGGGTGTCAACATGTCTGCTCAGCTGGTaGGGTGCTGGTCCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PGPGLRFSNGAHFCRVSTCLLSW*GAGPWD
Trigger: GTCCCAGGGACCAGCACCCAACCAGCTGAGCAGACA...TGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS CCA 90 bp ACAGCAAAGGAGACAAGCGGCTGGAGGCAGATGGGTCTGGCAATTTaGCAGGGCTGGCTGGTCACAGGTCCCTTCCCACCAGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TAKETSGWRQMGLAI*QGWLVTGPFPPVPG
Trigger: GCCTGGGACTGGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS GCA 90 bp GTACCTGAGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTaGAGACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: VPEVYVVFRDSRSTT*RLRSLAPWRTPGAN
Trigger: ATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558608.1
ENST00000559994.5
ENST00000560966.5
ENST00000561329.5
CDS CCA 90 bp GAAGACCGACAGCAAAGGAGACAAGCGGCTGGAGGCAGATGGGTCTaGCAATTTGGCAGGGCTGGCTGGTCACAGGTCCCTTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: EDRQQRRQAAGGRWV*QFGRAGWSQVPSHQ
Trigger: CTGGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTGTCGGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 90 bp CATCTGGAAGACCGACAGCAAAGGAGACAAGCGGCTGGAGGCAGATaGGTCTGGCAATTTGGCAGGGCTGGCTGGTCACAGGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HLEDRQQRRQAAGGR*VWQFGRAGWSQVPS
Trigger: GGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTGTCGGTCTTCCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS TCA 90 bp GATGCCGGCTGGAGCAGCAAGCAAGGGACAAAGTACCACGGTACCTaGGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTGCAG +
Preference number: 5 (lower is better)
Translates to: DAGWSSKQGTKYHGT*GVRGLPGLQINDLQ
Trigger: CTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTACCGTGGTACTTTGTCCCTTGCTTGCTGCTCCAGCCGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558608.1
ENST00000559994.5
ENST00000560966.5
ENST00000561329.5
CDS CCA 90 bp GAGACAAGCGGCTGGAGGCAGATGGGTCTGGCAATTTGGCAGGGCTaGCTGGTCACAGGTCCCTTCCCACCAGTCCCAGGCAGAATAAAT +
Preference number: 5 (lower is better)
Translates to: ETSGWRQMGLAIWQG*LVTGPFPPVPGRIN
Trigger: ATTTATTCTGCCTGGGACTGGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 90 bp GAGCAGCAAGCAAGGGACAAAGTACCACGGTACCTGAGGTGTACGTaGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: EQQARDKVPRYLRCT*SSGTPDQRPADFGA
Trigger: GGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTACCGTGGTACTTTGTCCCTTGCTTGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558608.1
ENST00000559994.5
ENST00000560966.5
ENST00000561329.5
CDS CCA 90 bp CTGTCACTGACATCTGGAAGACCGACAGCAAAGGAGACAAGCGGCTaGAGGCAGATGGGTCTGGCAATTTGGCAGGGCTGGCTGGTCACA +
Preference number: 5 (lower is better)
Translates to: LSLTSGRPTAKETSG*RQMGLAIWQGWLVT
Trigger: TGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTGTCGGTCTTCCAGATGTCAGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS-3UTR CAA 90 bp CCTGCAGACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGACCTCCATGGCGCACTTaGAAATCTCTTTCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: PADFGASPHGGLRVPMWRPPWRT*KSLSGN
Trigger: ATTCCCAGAAAGAGATTTCAAAGTGCGCCATGGAGG...TCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR CAA 90 bp GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGTGGAAAGCACAGGACTaGAGAAGCAGGTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: AWIHEKLRTCHRNHQVYRWKAQD*RSRWHP
Trigger: TGGGTGCCACCTGCTTCTCAAGTCCTGTGCTTTCCA...CCGGTACACCTGGTGGTTTCGATGGCAGGTGCGGAGTTTTTCGTGGATCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS TCA 90 bp TGTCTGCATCTAGGACCTGCAGGCTACTCAGCTCCTCACTGTCACTaGCATCTGGAAGACCGACAGCAAAGGAGACAAGCGGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: CLHLGPAGYSAPHCH*HLEDRQQRRQAAGG
Trigger: GCCTCCAGCCGCTTGTCTCCTTTGCTGTCGGTCTTCCAGATGTCAGTGACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS GCA 90 bp CTCAGCTCACTGCAGCCTCCGCCTCTCAGGTTCAAGAAATTCTTCTaGCTCAGCCTCCTGAGTAGCACTGTCCTCTGCAACCTGCCACAC +
Preference number: 5 (lower is better)
Translates to: LSSLQPPPLRFKKFF*LSLLSSTVLCNLPH
Trigger: GTGTGGCAGGTTGCAGAGGACAGTGCTACTCAGGAGGCTGAGGCAGAAGAATTTCTTGAACCTGAGAGGCGGAGGCTGCAGTGAGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR CAA 90 bp CTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCCACCCTAGGCGCAACAAAGACTCCTTaGTCATCAATCCATTCAAGG +
Preference number: 5 (lower is better)
Translates to: LAPWRTPGANVEKTATLGATKTP*SSIHSR
Trigger: CCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGC...GCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559178.5
ENST00000559224.5
CDS-3UTR CAA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTCCCACCTCAGCCTCTaGAATAGCTGGGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: DHFEALALLFSQGVSLPASHLSL*NSWDCR
Trigger: CCTGCAGTCCCAGCTATTCAAGAGGCTGAGGTGGGA...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCGAGATGGATGCCCTGTaGAGTCTTGGGGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: QVLIWRKAKTWSELEWQAEMDAL*SLGALS
Trigger: AGAAAGTGCCCCAAGACTCAACAGGGCATCCATCTC...GGCCTGCCACTCCAGCTCGCTCCAGGTCTTGGCTTTTCTCCAGATTAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS GCA 90 bp GTGAGCTCACCTGAGCAGCCTAAGCTCTGCTGTTGCCACTGCCCCTaGCTAGGGAGAGTAGTTCTCTGGATGAACTCAATTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VSSPEQPKLCCCHCP*LGRVVLWMNSIPGA
Trigger: TGCTCCTGGAATTGAGTTCATCCAGAGAACTACTCTCCCTAGGCAGGGGCAGTGGCAACAGCAGAGCTTAGGCTGCTCAGGTGAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 90 bp AAATCACATCTCCCTTCCCACTCATCTCACCATTGTCTGCTCAGCTaGTTGGGTGCTGGTCCCTGGGACTGCCTAATCCTGCCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: KSHLPSHSSHHCLLS*LGAGPWDCLILPQH
Trigger: ATGCTGGGGCAGGATTAGGCAGTCCCAGGGACCAGCACCCAACCAGCTGAGCAGACAATGGTGAGATGAGTGGGAAGGGAGATGTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 90 bp GGCAGACGTGGGACTGAGTTTACTTCCCATTTTACTCCCTGTTTCTaGGACCAGGCCAGTCCCTTGATGTCCCTGAGCCTCGGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GRRGTEFTSHFTPCF*DQASPLMSLSLGPH
Trigger: ATGAGGACCGAGGCTCAGGGACATCAAGGGACTGGCCTGGTCCCAGAAACAGGGAGTAAAATGGGAAGTAAACTCAGTCCCACGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS-3UTR CAA 90 bp CTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATCTGTCACTGACATCATaGTCTGCTCAGCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: LSSQDGRDPGGQEDKDAHLSLTS*SAQLVG
Trigger: CCCAACCAGCTGAGCAGACAATGATGTCAGTGACAG...ATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS TCA 90 bp GCATGGTTCAGTGGCCCAAACTCTGGAGTCAGGCAGACGTGGGACTaGGTTTACTTCCCATTTTACTCCCTGTTTCTGGGACCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: AWFSGPNSGVRQTWD*VYFPFYSLFLGPGQ
Trigger: CTGGCCTGGTCCCAGAAACAGGGAGTAAAATGGGAAGTAAACTCAGTCCCACGTCTGCCTGACTCCAGAGTTTGGGCCACTGAACCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS CCA 90 bp TGGCACAGAGAGTTGAACTCAGTTTTTATAGTGGCTGAGTTGGGCTaGGGGGTGATGCCGGCTGGAGCAGCAAGCAAGGGACAAAGTACC +
Preference number: 5 (lower is better)
Translates to: WHRELNSVFIVAELG*GVMPAGAASKGQST
Trigger: GGTACTTTGTCCCTTGCTTGCTGCTCCAGCCGGCATCACCCCCCAGCCCAACTCAGCCACTATAAAAACTGAGTTCAACTCTCTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558608.1
ENST00000559994.5
ENST00000560966.5
ENST00000561329.5
CDS-3UTR CAA 90 bp GGACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCCTCCATGGCGCACTTaGAAATCTCTTTCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: GLSSQDGRDPGGQEDKDAPPWRT*KSLSGN
Trigger: ATTCCCAGAAAGAGATTTCAAAGTGCGCCATGGAGG...GGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558521.5
CDS-3UTR CAA 90 bp CAGACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGAACATCCTTGGCTTaGAGTCAAGTTTTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: QTSEPRPMEDSGCQCGEDGTSLA*SQVLFW
Trigger: CCAAAACAAAACTTGACTCAAAGCCAAGGATGTTCC...GTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS-3UTR CAA 90 bp ACTTCGGAGCCTCGCCCCATGGAGGACTCCGGGTGCCAATGTGGAGAAGACGGCACATTACAGATGTCATaGTCTTGTAAGGTGGACAAG +
Preference number: 5 (lower is better)
Translates to: TSEPRPMEDSGCQCGEDGTLQMS*SCKVDK
Trigger: CTTGTCCACCTTACAAGACAATGACATCTGTAATGT...GCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS GCA 90 bp AAAGAGGTGAGCTCACCTGAGCAGCCTAAGCTCTGCTGTTGCCACTaGCCCTGCCTAGGGAGAGTAGTTCTCTGGATGAACTCAATTCCA +
Preference number: 5 (lower is better)
Translates to: KEVSSPEQPKLCCCH*PCLGRVVLWMNSIP
Trigger: TGGAATTGAGTTCATCCAGAGAACTACTCTCCCTAGGCAGGGGCAGTGGCAACAGCAGAGCTTAGGCTGCTCAGGTGAGCTCACCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 90 bp CTCACCACTGTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTGGTATGTGGCACATGCTT +
Preference number: 5 (lower is better)
Translates to: LTTVLCNLPHLQITT*KATGNQQSGMWHML
Trigger: AAGCATGTGCCACATACCAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGGTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560252.5
CDS CCA 90 bp GAATCACACGATGCACAGCACTTCACAGCTCAAAGAACTCCAAGATaGCAGCCGCATGGTTCAGTGGCCCAAACTCTGGAGTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: ESHDAQHFTAQRTPR*QPHGSVAQTLESGR
Trigger: TCTGCCTGACTCCAGAGTTTGGGCCACTGAACCATGCGGCTGCCATCTTGGAGTTCTTTGAGCTGTGAAGTGCTGTGCATCGTGTGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS CCA 90 bp CATCAAATTGCTACAAGTGACTCTCAGGTGCCCAGAAGAGTGGGTTaGGTCCCTCTAGGCTTAGCTCCTGAAACCCAGCTCAGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: HQIATSDSQVPRRVG*VPLGLAPETQLRSE
Trigger: CTCACTCCTGAGCTGGGTTTCAGGAGCTAAGCCTAGAGGGACCCAACCCACTCTTCTGGGCACCTGAGAGTCACTTGTAGCAATTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560966.5
ENST00000561434.1
CDS CCA 90 bp AGAGATCAGATAACAAGACGAAATCCTGCTCGGCAGTACCTGAGATaGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCACTCGCAGCA +
Preference number: 5 (lower is better)
Translates to: RDQITRRNPARQYLR*PSNSSGLGPKSLAA
Trigger: TGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTACTGCCGAGCAGGATTTCGTCTTGTTATCTGATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS-3UTR CAA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCACCACTTTGAGGCTCTaGCTCTGCTCTTTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: DHFEALALLFSQGVSLPATTLRL*LCSLAK
Trigger: CTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGT...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp CACCTGAGGTGTACGTGGTCTTCCGGGACTCCAGATCAACGACCTGCAGACTTCATGACCTCGAGTGACTaGCTAAAGCCTAGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: HLRCTWSSGTPDQRPADFMTSSD*LKPSKY
Trigger: GTACTTGCTAGGCTTTAGCAAGTCACTCGAGGTCAT...GAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS TCA 90 bp CAGGGTCCATCCCATTTCCATCTAGGAAGATGTGACCTCTGTGAGTaGAGAGAGGTTCTACTTGGCTCCGTGTTCCATCTTGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: QGPSHFHLGRCDLCE*REVLLGSVFHLGSV
Trigger: CACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTTCACTCACAGAGGTCACATCTTCCTAGATGGAAATGGGATGGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559994.5
CDS TCA 90 bp CGTCCCAGGGTACCCAGATTTCCCAAGGTTGACGTGAGGAATCAATaGGATCATCTGTGTTCTGAGCTGAACTCAGAGGCTGGCGCAAAC +
Preference number: 5 (lower is better)
Translates to: RPRVPRFPKVDVRNQ*DHLCSELNSEAGAN
Trigger: GTTTGCGCCAGCCTCTGAGTTCAGCTCAGAACACAGATGATCTCATTGATTCCTCACGTCAACCTTGGGAAATCTGGGTACCCTGGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS GCA 90 bp GTGGAGAAGACGGCCACCCTAGGCCAGAGACTCTCCTCTTTCTCATaGACAGCAATGGTGCTGACAGCTTTAATGACATCACTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: VEKTATLGQRLSSFS*TAMVLTALMTSLSS
Trigger: AGAGGACAGTGATGTCATTAAAGCTGTCAGCACCATTGCTGTGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558521.5
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559224.5
ENST00000559452.5
ENST00000559994.5
ENST00000560088.5
ENST00000560835.5
ENST00000561329.5
CDS GCA 90 bp AGAACCCCAAACCCCATCAAGTCAAATTCACTCACCACTGTCCTCTaGAACCTGCCACACCTGCAGATAACAACCTGGAAGGCCACTGGT +
Preference number: 5 (lower is better)
Translates to: RTPNPIKSNSLTTVL*NLPHLQITTWKATG
Trigger: ACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGGTGAGTGAATTTGACTTGATGGGGTTTGGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 90 bp GACATCACTGTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTGGTATGTGGCACATGCTT +
Preference number: 5 (lower is better)
Translates to: DITVLCNLPHLQITT*KATGNQQSGMWHML
Trigger: AAGCATGTGCCACATACCAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558521.5
ENST00000559126.5
ENST00000559452.5
ENST00000559994.5
ENST00000560088.5
ENST00000560835.5
ENST00000561329.5
ENST00000561447.5
CDS CCA 90 bp TTTGTTGCTGATAACAAAGTCCTTGGTCTGCAGGGATGCCAGGTGTaGGTGGTGACCAAAGGAGCAGGGTCCATCCCATTTCCATCTAGG +
Preference number: 5 (lower is better)
Translates to: FVADNKVLGLQGCQV*VVTKGAGSIPFPSR
Trigger: CCTAGATGGAAATGGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGCATCCCTGCAGACCAAGGACTTTGTTATCAGCAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559994.5
CDS CCA 90 bp AGTAGCACTGTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTGGTATGTGGCACATGCTT +
Preference number: 5 (lower is better)
Translates to: SSTVLCNLPHLQITT*KATGNQQSGMWHML
Trigger: AAGCATGTGCCACATACCAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGCTACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS CCA 90 bp AAGCTCTGCTGTTGCCACTGCCCCTGCCTAGGGAGAGTAGTTCTCTaGATGAACTCAATTCCAGGAGCAGGTTACAGGAAGCTCCATTTG +
Preference number: 5 (lower is better)
Translates to: KLCCCHCPCLGRVVL*MNSIPGAGYRKLHL
Trigger: CAAATGGAGCTTCCTGTAACCTGCTCCTGGAATTGAGTTCATCCAGAGAACTACTCTCCCTAGGCAGGGGCAGTGGCAACAGCAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 90 bp ACTTCACAGCTCAAAGAACTCCAAGATGGCAGCCGCATGGTTCAGTaGCCCAAACTCTGGAGTCAGGCAGACGTGGGACTGAGTTTACTT +
Preference number: 5 (lower is better)
Translates to: TSQLKELQDGSRMVQ*PKLWSQADVGLSLL
Trigger: AAGTAAACTCAGTCCCACGTCTGCCTGACTCCAGAGTTTGGGCCACTGAACCATGCGGCTGCCATCTTGGAGTTCTTTGAGCTGTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS CCA 90 bp CAAGCTTCCATGTGTCATGATGGTCACCTACAGAGGACACAAGTATaGGGCCAAACACAACCTGACCCAGAGACTCTTGGCCTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: QASMCHDGHLQRTQV*GQTQPDPETLGLSQ
Trigger: TTGGGAGAGGCCAAGAGTCTCTGGGTCAGGTTGTGTTTGGCCCCATACTTGTGTCCTCTGTAGGTGACCATCATGACACATGGAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS-3UTR CAA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTACTTGGTCCCCAGGCCTaGAGGTGGAATCCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLLGPQA*RWNPSG
Trigger: GCCACTGGGATTCCACCTCAAGGCCTGGGGACCAAG...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS GCA 90 bp GTGGAGAAGACGGCCACCCTAGGCCAGAGACTCTCCTCTTTCTCATaGACAGCAATGGTGCTGACAGCTTTAATGACATCTAGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: VEKTATLGQRLSSFS*TAMVLTALMTSRGK
Trigger: TTTTCCCCTAGATGTCATTAAAGCTGTCAGCACCATTGCTGTGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS GCA 90 bp CCAGCAACAAAGACTCCTGCACAAAAGGGACACAGAATCACACGATaGACAGCACTTCACAGCTCAAAGAACTCCAAGATGGCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: PATKTPAQKGHRITR*TALHSSKNSKMAAA
Trigger: TGCGGCTGCCATCTTGGAGTTCTTTGAGCTGTGAAGTGCTGTGCATCGTGTGATTCTGTGTCCCTTTTGTGCAGGAGTCTTTGTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559452.5
ENST00000559877.5
CDS CCA 90 bp AATACCCCCAGGCATTTGCAGCCATCCCATCCCATCCTGTGTGGATaGCTGGATCACAAAATTGACCATACCTGGTATGTGGCACATGCT +
Preference number: 5 (lower is better)
Translates to: NTPRHLQPSHPILCG*LDHKIDHTWYVAHA
Trigger: AGCATGTGCCACATACCAGGTATGGTCAATTTTGTGATCCAGCCATCCACACAGGATGGGATGGGATGGCTGCAAATGCCTGGGGGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558019.5
ENST00000558608.1
ENST00000559015.5
ENST00000559877.5
ENST00000560182.5
ENST00000560966.5
CDS CCA 90 bp TTTTGTAGAGACAGGGTTTCCTTGCTTAGGTTAGTCTCAAATTCCTaGGATCAAGCAATCTGCCCGCTGCCTCAGCCTCCTGAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: FCRDRVSLLRLVSNS*DQAICPLPQPPEVP
Trigger: GGGCACTTCAGGAGGCTGAGGCAGCGGGCAGATTGCTTGATCCCAGGAATTTGAGACTAACCTAAGCAAGGAAACCCTGTCTCTACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS-3UTR CAA 90 bp ACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCATCTGAGCCAGCAACAAAGACTCCTTaGTCATCAATCCATTCAAGG +
Preference number: 5 (lower is better)
Translates to: TGWQRSRGSRRQRRPSEPATKTP*SSIHSR
Trigger: CCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGC...TGGCTCAGATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CAA 90 bp ACTGAGCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAAGACGCCCAGCAACAAAGACTCCTTaGTCATCAATCCATTCAAGG +
Preference number: 5 (lower is better)
Translates to: TELTGWQRSRGSRRQRRPATKTP*SSIHSR
Trigger: CCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGC...TGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558521.5
ENST00000559224.5
CDS-3UTR CAA 90 bp TGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTCTGATAACAAAGTCCTaGGTCTGCAGGGATGCCAGG +
Preference number: 5 (lower is better)
Translates to: WTVDIVMVSTSLGCYEDPLITKS*VCRDAR
Trigger: CCTGGCATCCCTGCAGACCAAGGACTTTGTTATCAG...AGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAATGTCCACTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS GCA 90 bp CAACAGTCTCCTGGAAGAAAGAGATCAGATAACAAGACGAAATCCTaGTCGGCAGTACCTGAGATGGCCAAGCAATTCTTCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QQSPGRKRSDNKTKS*SAVPEMAKQFFRPG
Trigger: CCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTACTGCCGAGCAGGATTTCGTCTTGTTATCTGATCTCTTTCTTCCAGGAGACTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CCA 90 bp GAGCTTATCCACACAGGTCCCTTCCCCTTTCCAGCACACTTAGCTTaGGACTCCACTTCCCATATCAGGACATCTTACTGCAAGATCATC +
Preference number: 5 (lower is better)
Translates to: ELIHTGPFPFPAHLA*DSTSHIRTSYCKII
Trigger: GATGATCTTGCAGTAAGATGTCCTGATATGGGAAGTGGAGTCCCAAGCTAAGTGTGCTGGAAAGGGGAAGGGACCTGTGTGGATAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CCA 90 bp AAGAACCTGGAGAGTTCGAATTTCTCTGTGAGCAACTTTAACTCCTaGAGCCAGGTTTATCATGGTGCTGGAGGCTCCTTCCTGAGCACC +
Preference number: 5 (lower is better)
Translates to: KNLESSNFSVSNFNS*SQVYHGAGGSFLST
Trigger: GGTGCTCAGGAAGGAGCCTCCAGCACCATGATAAACCTGGCTCCAGGAGTTAAAGTTGCTCACAGAGAAATTCGAACTCTCCAGGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS-3UTR CAA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCGCAACAAAGACTCCTTaGTCATCAATCCATTCAAGG +
Preference number: 5 (lower is better)
Translates to: DHFEALALLFSQGVSLPAATKTP*SSIHSR
Trigger: CCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGC...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTGCCATTTAAAAGGTTaGTTGTTCTTGGGCAACCTC +
Preference number: 5 (lower is better)
Translates to: DHFEALALLFSQGVSLPACHLKG*LFLGNL
Trigger: GAGGTTGCCCAAGAACAACAAACCTTTTAAATGGCA...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS TCA 90 bp TTAACTCCTGGAGCCAGGTTTATCATGGTGCTGGAGGCTCCTTCCTaGGCACCCAACAGTCTCCTGGAAGAAAGAGATCAGATAACAAGA +
Preference number: 5 (lower is better)
Translates to: LTPGARFIMVLEAPS*APNSLLEERDQITR
Trigger: TCTTGTTATCTGATCTCTTTCTTCCAGGAGACTGTTGGGTGCTCAGGAAGGAGCCTCCAGCACCATGATAAACCTGGCTCCAGGAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS-3UTR CAA 90 bp GACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTCTGGGAATAAGCCCTaGTTTTCCTTTACAGAAAGT +
Preference number: 5 (lower is better)
Translates to: DHFEALALLFSQGVSLPASGNKP*FSFTES
Trigger: ACTTTCTGTAAAGGAAAACAAGGGCTTATTCCCAGA...GGCAGGAAGGGAGACTCCTTGGCTAAAGAGCAGAGCAAGAGCCTCAAAGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTGTGACGCTGGCAGACTaGCCCAAGGCCACACAGCTG +
Preference number: 5 (lower is better)
Translates to: EQKSCFAISLIATRAGIFVTLAD*PKATQL
Trigger: CAGCTGTGTGGCCTTGGGCAAGTCTGCCAGCGTCAC...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp GCCCTTAGAGGCCAGGGCTTACCTCTTATTCACTGTGTATCCCCAACACCTGAGCTGAATGGAACATCCTaGGCTTTGAGTCAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: ALRGQGLPLIHCVSPTPELNGTS*ALSQVL
Trigger: CAAAACTTGACTCAAAGCCAAGGATGTTCCATTCAG...CTCAGGTGTTGGGGATACACAGTGAATAAGAGGTAAGCCCTGGCCTCTAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559178.5
CDS TCA 90 bp GCAGCCATCCCATCCCATCCTGTGTGGATGGCTGGATCACAAAATTaGCCATACCTGGTATGTGGCACATGCTTTAGATCAAAGATAGAC +
Preference number: 5 (lower is better)
Translates to: AAIPSHPVWMAGSQN*PYLVCGTCFRSKID
Trigger: GTCTATCTTTGATCTAAAGCATGTGCCACATACCAGGTATGGTCAATTTTGTGATCCAGCCATCCACACAGGATGGGATGGGATGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558019.5
ENST00000558608.1
ENST00000559015.5
ENST00000559877.5
ENST00000560182.5
ENST00000560966.5
CDS CCA 90 bp CAGCAACAAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATGCATAGAAATCCTGGTACAAGCGCA +
Preference number: 5 (lower is better)
Translates to: QQQRLLCHQSIQGLE*LLTGRMHRNPGTSA
Trigger: TGCGCTTGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000434634.7
ENST00000558521.5
ENST00000559015.5
ENST00000559178.5
ENST00000559224.5
ENST00000560252.5
ENST00000561329.5
CDS CCA 90 bp GCGCCCAGCCAAGTTTTAGTTTTTATTTGGTTGTCTCCACCTGCTTaGTTAGCAGGGAGGTTCTCCTCTCTGTATTCTACATCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: APSQVLVFIWLSPPA*LAGRFSSLYSTSEA
Trigger: AGCCTCAGATGTAGAATACAGAGAGGAGAACCTCCCTGCTAACCAAGCAGGTGGAGACAACCAAATAAAAACTAAAACTTGGCTGGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 90 bp CAGCAACAAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATGCATAGAAATCCTGGTACCTGCACA +
Preference number: 5 (lower is better)
Translates to: QQQRLLCHQSIQGLE*LLTGRMHRNPGTCT
Trigger: TGTGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000560088.5
CDS CCA 90 bp CTCACCACTGTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTATTCAGAAAAGACAAAAT +
Preference number: 5 (lower is better)
Translates to: LTTVLCNLPHLQITT*KATGNQQSIQKRQN
Trigger: ATTTTGTCTTTTCTGAATAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CCA 90 bp GACATCACTGTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTTGTTTTCCTTTACAGAAA +
Preference number: 5 (lower is better)
Translates to: DITVLCNLPHLQITT*KATGNQQSCFPLQK
Trigger: TTTCTGTAAAGGAAAACAAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS TCA 90 bp AAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACAAGCGCAAGGATTC +
Preference number: 5 (lower is better)
Translates to: KDSFVINPFKDSSGS*QVECIEILVQAQGF
Trigger: GAATCCTTGCGCTTGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000434634.7
ENST00000558521.5
ENST00000559015.5
ENST00000559178.5
ENST00000559224.5
ENST00000560252.5
ENST00000561329.5
CDS TCA 90 bp AAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACCTGCACAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: KDSFVINPFKDSSGS*QVECIEILVPAQKG
Trigger: TCCCTTTTGTGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000560088.5
CDS TCA 90 bp TATACCACCTTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACCTGCACAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: YTTFVINPFKDSSGS*QVECIEILVPAQKG
Trigger: TCCCTTTTGTGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGTGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CCA 90 bp CCCAAGAGCAATAGAAGAGCATCTTTCTGTCCCGTATCTATTCCCTaGAGCAACTCCGGTAGAACTGTTACTTACATTAGTCCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: PKSNRRASFCPVSIP*SNSGRTVTYISPRA
Trigger: AGCCCTTGGACTAATGTAAGTAACAGTTCTACCGGAGTTGCTCCAGGGAATAGATACGGGACAGAAAGATGCTCTTCTATTGCTCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CCA 90 bp GACATCACTGTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTATTCAGAAAAGACAAAAT +
Preference number: 5 (lower is better)
Translates to: DITVLCNLPHLQITT*KATGNQQSIQKRQN
Trigger: ATTTTGTCTTTTCTGAATAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558608.1
ENST00000559015.5
CDS CCA 90 bp AGAAAGGTATACCACCTTTGTCATCAATCCATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATGCATAGAAATCCTGGTACCTGCACA +
Preference number: 5 (lower is better)
Translates to: RKVYHLCHQSIQGLE*LLTGRMHRNPGTCT
Trigger: TGTGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGTGGTATACCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS-3UTR CAA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTGCTCCGTGTTCCATCTaGGCTCCGTGTTCCATCCCA +
Preference number: 5 (lower is better)
Translates to: EQKSCFAISLIATRAGIFAPCSI*APCSIP
Trigger: TGGGATGGAACACGGAGCCAAGATGGAACACGGAGC...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGTCTGTTATGACTAATTaGGGTCTGGAATGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVASVMTN*GLEWPH
Trigger: ATGAGGCCATTCCAGACCCAAATTAGTCATAACAGA...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAGGTAGGAGGCCTTCTTaGGGATTGAGAGGATTCCAA +
Preference number: 5 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLGRRPS*GLRGFQ
Trigger: TTGGAATCCTCTCAATCCCAAAGAAGGCCTCCTACC...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS TCA 90 bp AAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACGATTTACAAGCGCA +
Preference number: 5 (lower is better)
Translates to: KDSFVINPFKDSSGS*QVECIEILVRFTSA
Trigger: TGCGCTTGTAAATCGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398528.7
ENST00000558019.5
ENST00000559994.5
ENST00000560835.5
CDS TCA 90 bp TATACCACCTTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACGATTTACAAGCGCA +
Preference number: 5 (lower is better)
Translates to: YTTFVINPFKDSSGS*QVECIEILVRFTSA
Trigger: TGCGCTTGTAAATCGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGTGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561434.1
CDS CCA 90 bp CAGCAACAAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATGCATAGAAATCCTGGTACGATTTAC +
Preference number: 5 (lower is better)
Translates to: QQQRLLCHQSIQGLE*LLTGRMHRNPGTIY
Trigger: GTAAATCGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398528.7
ENST00000558019.5
ENST00000559994.5
ENST00000560835.5
CDS-3UTR CAA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAAGGCCTTCTTTGGGATaGAGAGGATTCCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLRPSLG*RGFQRE
Trigger: TTCCCTTTGGAATCCTCTCAATCCCAAAGAAGGCCT...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS CCA 90 bp CAGCAACAAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATGCATAGAAATCCTGGTACTAGTAAT +
Preference number: 5 (lower is better)
Translates to: QQQRLLCHQSIQGLE*LLTGRMHRNPGTSN
Trigger: ATTACTAGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560182.5
ENST00000561447.5
CDS CCA 90 bp AGAAAGGTATACCACCTTTGTCATCAATCCATTCAAGGACTCGAGTaGCTCCTGACAGGTCGAATGCATAGAAATCCTGGTACGATTTAC +
Preference number: 5 (lower is better)
Translates to: RKVYHLCHQSIQGLE*LLTGRMHRNPGTIY
Trigger: GTAAATCGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGTGGTATACCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561434.1
CDS-3UTR CAA 90 bp CCCACTCAAGAGGAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGCCTCCATGGCGCACTTaGAAATCTCTTTCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: PTQEEQKSCFAISLIATRPPWRT*KSLSGN
Trigger: ATTCCCAGAAAGAGATTTCAAAGTGCGCCATGGAGG...CCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCTTGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCATTTAAAAGGTTTGTaGTTCTTGGGCAACCTCTTT +
Preference number: 5 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVAHLKGL*FLGNLF
Trigger: AAAGAGGTTGCCCAAGAACAACAAACCTTTTAAATG...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTGTCCTCAAATATTGCTaGACTCAACCCTCTACTGAA +
Preference number: 5 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCVLKYC*TQPSTE
Trigger: TTCAGTAGAGGGTTGAGTCAAGCAATATTTGAGGAC...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp AGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGTCATCGGGGGAAAAATaGGTGACAACTTTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: RSSHLFPSKVPYKPGMVASSGEK*VTTLRN
Trigger: ATTTCTTAAAGTTGTCACCAATTTTTCCCCCGATGA...CGCCACCATGCCCGGCTTATAGGGCACTTTAGATGGAAACAAATGACTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp TCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTCATTACATCTCCCTTTaGTCTGCCTGCAAACAGATT +
Preference number: 5 (lower is better)
Translates to: SLGLRGFQREPGHSTRRCHYISL*SACKQI
Trigger: AATCTGTTTGCAGGCAGACAAAAGGGAGATGTAATG...ACATCTTCTAGTGCTATGCCCTGGTTCCCTTTGGAATCCTCTCAATCCCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS TCA 90 bp AAAGACTCCTTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACTAGTAATCTCACAA +
Preference number: 5 (lower is better)
Translates to: KDSFVINPFKDSSGS*QVECIEILVLVISQ
Trigger: TTGTGAGATTACTAGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560182.5
ENST00000561447.5
CDS CCA 90 bp TCCCCTGTACATTTAGAAGATCAAGGAAGAAAAGGAGCTGCCGGCTaGCAAGAGATGATGTTGAGACATAACTACTCTGGCTTATGTTTA +
Preference number: 5 (lower is better)
Translates to: SPVHLEDQGRKGAAG*QEMMLRHNYSGLCL
Trigger: TAAACATAAGCCAGAGTAGTTATGTCTCAACATCATCTCTTGCCAGCCGGCAGCTCCTTTTCTTCCTTGATCTTCTAAATGTACAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS-3UTR CAA 90 bp ATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAGAGAGGCATCATTTGTaGCTGATAACAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: IVMVSTSLGCYEDPDTVLERHHL*LITKSL
Trigger: CAAGGACTTTGTTATCAGCAACAAATGATGCCTCTC...TAATACTGTGTCAGGATCCTCATAACAGCCCAGGGAGGTAGAAACCATCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp GAGCAGAAATCCTGTTTTGCTATTTCCTTAATTGCTACTAGGGCTGGGATTTTTCTCACAAAGACCACTTaGAGGCTCTTGCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: EQKSCFAISLIATRAGIFLTKTT*RLLLCS
Trigger: AGAGCAGAGCAAGAGCCTCAAAGTGGTCTTTGTGAG...AAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTGAAGAGAGGTTCTACTaGGCTCCGTGTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTEERFY*APCSIL
Trigger: CAAGATGGAACACGGAGCCAAGTAGAACCTCTCTTC...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS-3UTR CAA 90 bp GGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTTCCCGTCCTCAAATATaGCTTGACTCAACCCTCTAC +
Preference number: 5 (lower is better)
Translates to: GDNFKKYCLYPVLKYCLTSRPQI*LDSTLY
Trigger: GTAGAGGGTTGAGTCAAGCAATATTTGAGGACGGGA...AGTCAAGCAATATTTGAGGACGGGATATAAACAGTATTTCTTAAAGTTGTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434634.7
CDS CCA 72 bp AGATGGGGGCCTAGGCCCAGGCGGAGTCCTCCACGGTaGCGAGCCCCGAGGCCACAGCTGGCCCACTCTGCA +
Preference number: 6 (lower is better)
Translates to: RWGPRPRRSPPR*RAPRPQLAHSA
Trigger: TGCAGAGTGGGCCAGCTGTGGCCTCGGGGCTCGCCACCGTGGAGGACTCCGCCTGGGCCTAGGCCCCCATCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000559126.5
ENST00000559452.5
ENST00000560182.5
ENST00000560966.5
ENST00000561447.5
CDS GCA 72 bp CATGGCAACGACCGCTTCCGGCGTCTCACTTCCGCCTaGGAGCCTTCGGGGGCCGCGCGGCTCTCGCGAGAT +
Preference number: 6 (lower is better)
Translates to: HGNDRFRRLTSA*EPSGAARLSRD
Trigger: ATCTCGCGAGAGCCGCGCGGCCCCCGAAGGCTCGCAGGCGGAAGTGAGACGCCGGAAGCGGTCGTTGCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398528.7
CDS CCA 72 bp GGCTGGAGGCAGATGGGTCTGGCAATTTGGCAGGGCTaGCTGGTCACAGGTCCCTTCCCACCAGTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: GWRQMGLAIWQG*LVTGPFPPVPG
Trigger: GCCTGGGACTGGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CAA 72 bp GGAGACAAGCGGCTGGAGGCAGATGGGTCTGGCAATTaGGCAGGGCTGGCTGGTCACAGGTCCCTTCCCACC +
Preference number: 6 (lower is better)
Translates to: GDKRLEADGSGN*AGLAGHRSLPT
Trigger: GGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CAA 90 bp GACAGCAAAGGAGACAAGCGGCTGGAGGCAGATGGGTCTGGCAATTaGGCAGGGCTGGCTGGTCACAGGTCCCTTCCCACCAGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: DSKGDKRLEADGSGN*AGLAGHRSLPTSPR
Trigger: CCTGGGACTGGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp GGAGGCAGATGGGTCTGGCAATTTGGCAGGGCTGGCTaGTCACAGGTCCCTTCCCACCAGTCCCAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: GGRWVWQFGRAG*SQVPSHQSQAE
Trigger: TTCTGCCTGGGACTGGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp GAGACAAGCGGCTGGAGGCAGATGGGTCTGGCAATTTaGCAGGGCTGGCTGGTCACAGGTCCCTTCCCACCA +
Preference number: 6 (lower is better)
Translates to: ETSGWRQMGLAI*QGWLVTGPFPP
Trigger: TGGTGGGAAGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp CAGCAAAGGAGACAAGCGGCTGGAGGCAGATGGGTCTaGCAATTTGGCAGGGCTGGCTGGTCACAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: QQRRQAAGGRWV*QFGRAGWSQVP
Trigger: AGGGACCTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp GACCGACAGCAAAGGAGACAAGCGGCTGGAGGCAGATaGGTCTGGCAATTTGGCAGGGCTGGCTGGTCACAG +
Preference number: 6 (lower is better)
Translates to: DRQQRRQAAGGR*VWQFGRAGWSQ
Trigger: CTGTGACCAGCCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTGTCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CAA 90 bp TCACATCTCCCTTCCCACTCATCTCACCATTGTCTGCTCAGCTGGTaGGGTGCTGGTCCCTGGGACTGCCTAATCCTGCCCCAGCATAGG +
Preference number: 6 (lower is better)
Translates to: SHLPSHSSHHCLLSW*GAGPWDCLILPQHR
Trigger: CCTATGCTGGGGCAGGATTAGGCAGTCCCAGGGACCAGCACCCAACCAGCTGAGCAGACAATGGTGAGATGAGTGGGAAGGGAGATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp CTCCCTTCCCACTCATCTCACCATTGTCTGCTCAGCTaGTTGGGTGCTGGTCCCTGGGACTGCCTAATCCTG +
Preference number: 6 (lower is better)
Translates to: LPSHSSHHCLLS*LGAGPWDCLIL
Trigger: CAGGATTAGGCAGTCCCAGGGACCAGCACCCAACCAGCTGAGCAGACAATGGTGAGATGAGTGGGAAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp ACATCTGGAAGACCGACAGCAAAGGAGACAAGCGGCTaGAGGCAGATGGGTCTGGCAATTTGGCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: TSGRPTAKETSG*RQMGLAIWQGW
Trigger: CCAGCCCTGCCAAATTGCCAGACCCATCTGCCTCCAGCCGCTTGTCTCCTTTGCTGTCGGTCTTCCAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS GCA 72 bp AGCTCACCTGAGCAGCCTAAGCTCTGCTGTTGCCACTaGCCCTGCCTAGGGAGAGTAGTTCTCTGGATGAAC +
Preference number: 6 (lower is better)
Translates to: SSPEQPKLCCCH*PCLGRVVLWMN
Trigger: GTTCATCCAGAGAACTACTCTCCCTAGGCAGGGGCAGTGGCAACAGCAGAGCTTAGGCTGCTCAGGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 72 bp GCAAGGGACAAAGTACCACGGTACCTGAGGTGTACGTaGTCTTCCGGGACTCCAGATCAACGACCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: ARDKVPRYLRCT*SSGTPDQRPAD
Trigger: GTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTACCGTGGTACTTTGTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558608.1
ENST00000559994.5
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp CTGCAGGCTACTCAGCTCCTCACTGTCACTGACATCTaGAAGACCGACAGCAAAGGAGACAAGCGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LQATQLLTVTDI*KTDSKGDKRLE
Trigger: CTCCAGCCGCTTGTCTCCTTTGCTGTCGGTCTTCCAGATGTCAGTGACAGTGAGGAGCTGAGTAGCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp CTCAAAGAACTCCAAGATGGCAGCCGCATGGTTCAGTaGCCCAAACTCTGGAGTCAGGCAGACGTGGGACTG +
Preference number: 6 (lower is better)
Translates to: LKELQDGSRMVQ*PKLWSQADVGL
Trigger: CAGTCCCACGTCTGCCTGACTCCAGAGTTTGGGCCACTGAACCATGCGGCTGCCATCTTGGAGTTCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS CCA 72 bp GCTACAAGTGACTCTCAGGTGCCCAGAAGAGTGGGTTaGGTCCCTCTAGGCTTAGCTCCTGAAACCCAGCTC +
Preference number: 6 (lower is better)
Translates to: ATSDSQVPRRVG*VPLGLAPETQL
Trigger: GAGCTGGGTTTCAGGAGCTAAGCCTAGAGGGACCCAACCCACTCTTCTGGGCACCTGAGAGTCACTTGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560966.5
ENST00000561434.1
CDS CAA 72 bp CATTTTACTCCCTGTTTCTGGGACCAGGCCAGTCCCTaGATGTCCCTGAGCCTCGGTCCTCATGTGTGGACG +
Preference number: 6 (lower is better)
Translates to: HFTPCFWDQASP*MSLSLGPHVWT
Trigger: CGTCCACACATGAGGACCGAGGCTCAGGGACATCAAGGGACTGGCCTGGTCCCAGAAACAGGGAGTAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS CAA 90 bp TTTACTTCCCATTTTACTCCCTGTTTCTGGGACCAGGCCAGTCCCTaGATGTCCCTGAGCCTCGGTCCTCATGTGTGGACGTCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: FTSHFTPCFWDQASP*MSLSLGPHVWTSQG
Trigger: ACCCTGGGACGTCCACACATGAGGACCGAGGCTCAGGGACATCAAGGGACTGGCCTGGTCCCAGAAACAGGGAGTAAAATGGGAAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS TCA 72 bp TGGAGCAGCAAGCAAGGGACAAAGTACCACGGTACCTaGGGTGTACGTGGTCTTCCGGGACTCCAGATCAAC +
Preference number: 6 (lower is better)
Translates to: WSSKQGTKYHGT*GVRGLPGLQIN
Trigger: GTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGGTACCGTGGTACTTTGTCCCTTGCTTGCTGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558608.1
ENST00000559994.5
ENST00000560966.5
ENST00000561329.5
CDS TCA 72 bp CTAGGACCTGCAGGCTACTCAGCTCCTCACTGTCACTaGCATCTGGAAGACCGACAGCAAAGGAGACAAGCG +
Preference number: 6 (lower is better)
Translates to: LGPAGYSAPHCH*HLEDRQQRRQA
Trigger: CGCTTGTCTCCTTTGCTGTCGGTCTTCCAGATGTCAGTGACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000560966.5
ENST00000561329.5
CDS CCA 72 bp GAGTTGAACTCAGTTTTTATAGTGGCTGAGTTGGGCTaGGGGGTGATGCCGGCTGGAGCAGCAAGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: ELNSVFIVAELG*GVMPAGAASKG
Trigger: TCCCTTGCTTGCTGCTCCAGCCGGCATCACCCCCCAGCCCAACTCAGCCACTATAAAAACTGAGTTCAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000558608.1
ENST00000559994.5
ENST00000560966.5
ENST00000561329.5
CDS GCA 72 bp CCTGAGCAGCCTAAGCTCTGCTGTTGCCACTGCCCCTaGCTAGGGAGAGTAGTTCTCTGGATGAACTCAATT +
Preference number: 6 (lower is better)
Translates to: PEQPKLCCCHCP*LGRVVLWMNSI
Trigger: AATTGAGTTCATCCAGAGAACTACTCTCCCTAGGCAGGGGCAGTGGCAACAGCAGAGCTTAGGCTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS GCA 72 bp GCTGAACTCAGAGGCTGGCGCAAACTAACTGGGCACTaGGTCTTCACAAGCGCGGCTCTTACTAGTAATCTC +
Preference number: 6 (lower is better)
Translates to: AELRGWRKLTGH*VFTSAALTSNL
Trigger: GAGATTACTAGTAAGAGCCGCGCTTGTGAAGACGCAGTGCCCAGTTAGTTTGCGCCAGCCTCTGAGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559126.5
ENST00000559452.5
ENST00000560966.5
CDS CCA 72 bp GTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTGGTATGTGG +
Preference number: 6 (lower is better)
Translates to: VLCNLPHLQITT*KATGNQQSGMW
Trigger: CCACATACCAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558521.5
ENST00000559126.5
ENST00000559178.5
ENST00000559452.5
ENST00000559994.5
ENST00000560088.5
ENST00000560252.5
ENST00000560835.5
ENST00000561329.5
ENST00000561447.5
CDS CCA 72 bp GATAACAAAGTCCTTGGTCTGCAGGGATGCCAGGTGTaGGTGGTGACCAAAGGAGCAGGGTCCATCCCATTT +
Preference number: 6 (lower is better)
Translates to: DNKVLGLQGCQV*VVTKGAGSIPF
Trigger: AAATGGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGCATCCCTGCAGACCAAGGACTTTGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559994.5
CDS CCA 72 bp GGGACTGAGTTTACTTCCCATTTTACTCCCTGTTTCTaGGACCAGGCCAGTCCCTTGATGTCCCTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: GTEFTSHFTPCF*DQASPLMSLSL
Trigger: GAGGCTCAGGGACATCAAGGGACTGGCCTGGTCCCAGAAACAGGGAGTAAAATGGGAAGTAAACTCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS CCA 72 bp GATGCACAGCACTTCACAGCTCAAAGAACTCCAAGATaGCAGCCGCATGGTTCAGTGGCCCAAACTCTGGAG +
Preference number: 6 (lower is better)
Translates to: DAQHFTAQRTPR*QPHGSVAQTLE
Trigger: CTCCAGAGTTTGGGCCACTGAACCATGCGGCTGCCATCTTGGAGTTCTTTGAGCTGTGAAGTGCTGTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS CAA 90 bp CACAAAGGTCCACCCAGTCCCACACATGCAGAGAGGCATCATTTGTaGCTGATAACAAAGTCCTTGGTCTGCAGGGATGCCAGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: HKGPPSPTHAERHHL*LITKSLVCRDARCG
Trigger: CCCACACCTGGCATCCCTGCAGACCAAGGACTTTGTTATCAGCAACAAATGATGCCTCTCTGCATGTGTGGGACTGGGTGGACCTTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559994.5
CDS TCA 72 bp GGTTTCACCGTGTTAGCCACTGTCCCCTTTTCTTTCTaGCCCAGCCCGATGTCTGTCCCAGTGTCTTACTGT +
Preference number: 6 (lower is better)
Translates to: GFTVLATVPFSF*PSPMSVPVSYC
Trigger: ACAGTAAGACACTGGGACAGACATCGGGCTGGGTCAGAAAGAAAAGGGGACAGTGGCTAACACGGTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CCA 72 bp CACACAGGTCCCTTCCCCTTTCCAGCACACTTAGCTTaGGACTCCACTTCCCATATCAGGACATCTTACTGC +
Preference number: 6 (lower is better)
Translates to: HTGPFPFPAHLA*DSTSHIRTSYC
Trigger: GCAGTAAGATGTCCTGATATGGGAAGTGGAGTCCCAAGCTAAGTGTGCTGGAAAGGGGAAGGGACCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CCA 72 bp GACAGGGTTTCCTTGCTTAGGTTAGTCTCAAATTCCTaGGATCAAGCAATCTGCCCGCTGCCTCAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: DRVSLLRLVSNS*DQAICPLPQPP
Trigger: AGGAGGCTGAGGCAGCGGGCAGATTGCTTGATCCCAGGAATTTGAGACTAACCTAAGCAAGGAAACCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CCA 72 bp ATAACAAGACGAAATCCTGCTCGGCAGTACCTGAGATaGCCAAGCAATTCTTCAGGCCTGGGGCCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: ITRRNPARQYLR*PSNSSGLGPKS
Trigger: TGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTACTGCCGAGCAGGATTTCGTCTTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CAA 72 bp CCACACAGGTCCCTTCCCCTTTCCAGCACACTTAGCTaGGGACTCCACTTCCCATATCAGGACATCTTACTG +
Preference number: 6 (lower is better)
Translates to: PHRSLPLSSTLS*GLHFPYQDILL
Trigger: CAGTAAGATGTCCTGATATGGGAAGTGGAGTCCCAAGCTAAGTGTGCTGGAAAGGGGAAGGGACCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CCA 72 bp ATGTGTCATGATGGTCACCTACAGAGGACACAAGTATaGGGCCAAACACAACCTGACCCAGAGACTCTTGGC +
Preference number: 6 (lower is better)
Translates to: MCHDGHLQRTQV*GQTQPDPETLG
Trigger: GCCAAGAGTCTCTGGGTCAGGTTGTGTTTGGCCCCATACTTGTGTCCTCTGTAGGTGACCATCATGACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CCA 72 bp GTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTTGTTTTCCT +
Preference number: 6 (lower is better)
Translates to: VLCNLPHLQITT*KATGNQQSCFP
Trigger: AGGAAAACAAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559224.5
CDS CAA 72 bp GAAGATGTGACCTCTGTGAGTGAAGAGAGGTTCTACTaGGCTCCGTGTTCCATCTTGGCTCCGTGTTCCATC +
Preference number: 6 (lower is better)
Translates to: EDVTSVSEERFY*APCSILAPCSI
Trigger: GATGGAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTTCACTCACAGAGGTCACATCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559994.5
CDS CAA 90 bp GGAGCTTATCCACACAGGTCCCTTCCCCTTTCCAGCACACTTAGCTaGGGACTCCACTTCCCATATCAGGACATCTTACTGCAAGATCAT +
Preference number: 6 (lower is better)
Translates to: GAYPHRSLPLSSTLS*GLHFPYQDILLQDH
Trigger: ATGATCTTGCAGTAAGATGTCCTGATATGGGAAGTGGAGTCCCAAGCTAAGTGTGCTGGAAAGGGGAAGGGACCTGTGTGGATAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS TCA 72 bp AATATTAGTGCTGATGGGGCATCAAATTGCTACAAGTaGCTCTCAGGTGCCCAGAAGAGTGGGTTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: NISADGASNCYK*LSGAQKSGLGP
Trigger: GGGACCCAACCCACTCTTCTGGGCACCTGAGAGTCACTTGTAGCAATTTGATGCCCCATCAGCACTAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560966.5
ENST00000561434.1
CDS GCA 72 bp AACCCCATCAAGTCAAATTCACTCACCACTGTCCTCTaGAACCTGCCACACCTGCAGATAACAACCTGGAAG +
Preference number: 6 (lower is better)
Translates to: NPIKSNSLTTVL*NLPHLQITTWK
Trigger: CTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGGTGAGTGAATTTGACTTGATGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS GCA 72 bp GGAGCAGGTTACAGGAAGCTCCATTTGGGGCTTGGATaGCATGCTATGGTTGCTAATTCACCTTGTCTGCAT +
Preference number: 6 (lower is better)
Translates to: GAGYRKLHLGLG*HAMVANSPCLH
Trigger: ATGCAGACAAGGTGAATTAGCAACCATAGCATGGCATCCAAGCCCCAAATGGAGCTTCCTGTAACCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS GCA 72 bp CTCCTGACAGGTCGAATGCATAGAAATCCTGGTACCTaGACAAAAGGGACACAGAATCACACGATGCACAGC +
Preference number: 6 (lower is better)
Translates to: LLTGRMHRNPGT*TKGTQNHTMHS
Trigger: GCTGTGCATCGTGTGATTCTGTGTCCCTTTTGTGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000560088.5
ENST00000560966.5
CDS CCA 72 bp ATTTGCAGCCATCCCATCCCATCCTGTGTGGATGGCTaGATCACAAAATTGACCATACCTGGTATGTGGCAC +
Preference number: 6 (lower is better)
Translates to: ICSHPIPSCVDG*ITKLTIPGMWH
Trigger: GTGCCACATACCAGGTATGGTCAATTTTGTGATCCAGCCATCCACACAGGATGGGATGGGATGGCTGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558019.5
ENST00000558608.1
ENST00000559015.5
ENST00000559877.5
ENST00000560182.5
ENST00000560966.5
CDS CCA 72 bp GTCCTCTGCAACCTGCCACACCTGCAGATAACAACCTaGAAGGCCACTGGTAACCAGCAATCTATTCAGAAA +
Preference number: 6 (lower is better)
Translates to: VLCNLPHLQITT*KATGNQQSIQK
Trigger: TTTCTGAATAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CAA 72 bp AGTGAAGAGAGGTTCTACTTGGCTCCGTGTTCCATCTaGGCTCCGTGTTCCATCCCAAGATGTGGCATCATA +
Preference number: 6 (lower is better)
Translates to: SEERFYLAPCSI*APCSIPRCGII
Trigger: TATGATGCCACATCTTGGGATGGAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559994.5
CDS CAA 90 bp CTCTGGATGAACTCAATTCCAGGAGCAGGTTACAGGAAGCTCCATTaGGGGCTTGGATGCCATGCTATGGTTGCTAATTCACCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: LWMNSIPGAGYRKLH*GLGCHAMVANSPCL
Trigger: CAGACAAGGTGAATTAGCAACCATAGCATGGCATCCAAGCCCCAAATGGAGCTTCCTGTAACCTGCTCCTGGAATTGAGTTCATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS TCA 72 bp GCTTCTCTTAATATATGCTTAATGCTGCCAAAGAGGTaGGCTCACCTGAGCAGCCTAAGCTCTGCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: ASLNICLMLPKR*AHLSSLSSAVA
Trigger: GGCAACAGCAGAGCTTAGGCTGCTCAGGTGAGCTCACCTCTTTGGCAGCATTAAGCATATATTAAGAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS GCA 72 bp GCTTGGGACTCCACTTCCCATATCAGGACATCTTACTaGAAGATCATCAAGGCCAACCACCCTCATTTCACA +
Preference number: 6 (lower is better)
Translates to: AWDSTSHIRTSY*KIIKANHPHFT
Trigger: TGTGAAATGAGGGTGGTTGGCCTTGATGATCTTGCAGTAAGATGTCCTGATATGGGAAGTGGAGTCCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CCA 72 bp ACTCAATTCCAGGAGCAGGTTACAGGAAGCTCCATTTaGGGCTTGGATGCCATGCTATGGTTGCTAATTCAC +
Preference number: 6 (lower is better)
Translates to: TQFQEQVTGSSI*GLDAMLWLLIH
Trigger: GTGAATTAGCAACCATAGCATGGCATCCAAGCCCCAAATGGAGCTTCCTGTAACCTGCTCCTGGAATTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 72 bp GAGAGTTCGAATTTCTCTGTGAGCAACTTTAACTCCTaGAGCCAGGTTTATCATGGTGCTGGAGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ESSNFSVSNFNS*SQVYHGAGGSF
Trigger: GAAGGAGCCTCCAGCACCATGATAAACCTGGCTCCAGGAGTTAAAGTTGCTCACAGAGAAATTCGAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS TCA 72 bp TCCCATTTCCATCTAGGAAGATGTGACCTCTGTGAGTaGAGAGAGGTTCTACTTGGCTCCGTGTTCCATCTT +
Preference number: 6 (lower is better)
Translates to: SHFHLGRCDLCE*REVLLGSVFHL
Trigger: AAGATGGAACACGGAGCCAAGTAGAACCTCTCTTCACTCACAGAGGTCACATCTTCCTAGATGGAAATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558608.1
ENST00000559015.5
ENST00000559126.5
ENST00000559994.5
CDS TCA 72 bp TTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACAAGCG +
Preference number: 6 (lower is better)
Translates to: FVINPFKDSSGS*QVECIEILVQA
Trigger: CGCTTGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000434634.7
ENST00000558521.5
ENST00000559015.5
ENST00000559178.5
ENST00000559224.5
ENST00000560252.5
ENST00000561329.5
CDS TCA 72 bp CCATCCCATCCTGTGTGGATGGCTGGATCACAAAATTaGCCATACCTGGTATGTGGCACATGCTTTAGATCA +
Preference number: 6 (lower is better)
Translates to: PSHPVWMAGSQN*PYLVCGTCFRS
Trigger: TGATCTAAAGCATGTGCCACATACCAGGTATGGTCAATTTTGTGATCCAGCCATCCACACAGGATGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558019.5
ENST00000558608.1
ENST00000559015.5
ENST00000559877.5
ENST00000560182.5
ENST00000560966.5
CDS TCA 72 bp GTACCCAGATTTCCCAAGGTTGACGTGAGGAATCAATaGGATCATCTGTGTTCTGAGCTGAACTCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VPRFPKVDVRNQ*DHLCSELNSEA
Trigger: AGCCTCTGAGTTCAGCTCAGAACACAGATGATCTCATTGATTCCTCACGTCAACCTTGGGAAATCTGGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000559452.5
ENST00000559877.5
ENST00000560966.5
CDS TCA 72 bp TTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACCTGCA +
Preference number: 6 (lower is better)
Translates to: FVINPFKDSSGS*QVECIEILVPA
Trigger: TGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558487.1
ENST00000559126.5
ENST00000560088.5
ENST00000560966.5
CDS GCA 72 bp CCTGGAAGAAAGAGATCAGATAACAAGACGAAATCCTaGTCGGCAGTACCTGAGATGGCCAAGCAATTCTTC +
Preference number: 6 (lower is better)
Translates to: PGRKRSDNKTKS*SAVPEMAKQFF
Trigger: GAAGAATTGCTTGGCCATCTCAGGTACTGCCGAGCAGGATTTCGTCTTGTTATCTGATCTCTTTCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CAA 72 bp AACTCAATTCCAGGAGCAGGTTACAGGAAGCTCCATTaGGGGCTTGGATGCCATGCTATGGTTGCTAATTCA +
Preference number: 6 (lower is better)
Translates to: NSIPGAGYRKLH*GLGCHAMVANS
Trigger: TGAATTAGCAACCATAGCATGGCATCCAAGCCCCAAATGGAGCTTCCTGTAACCTGCTCCTGGAATTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CAA 72 bp TTTCAGGCTTTCATAGCCAGCAACAAAGACTCCTGGTaGTGTCTTTTTCAGACAAGGTCTCGCTGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: FQAFIASNKDSW*CLFQTRSRCVS
Trigger: GCTGACACAGCGAGACCTTGTCTGAAAAAGACACAACCAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS TCA 72 bp ACGAAGAGGCCAAAATCCAGAACTTTAATGAAGGTTTaGAACATGACAGGCTGCCAGCTGTCTTCCCCTGTA +
Preference number: 6 (lower is better)
Translates to: TKRPKSRTLMKV*NMTGCQLSSPV
Trigger: TACAGGGGAAGACAGCTGGCAGCCTGTCATGTTTCAAACCTTCATTAAAGTTCTGGATTTTGGCCTCTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CCA 72 bp CTTTTTCAGGCTTTCATAGCCAGCAACAAAGACTCCTaGTTGTGTCTTTTTCAGACAAGGTCTCGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: LFQAFIASNKDS*LCLFQTRSRCV
Trigger: GACACAGCGAGACCTTGTCTGAAAAAGACACAACCAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS CAA 72 bp AACGAAGAGGCCAAAATCCAGAACTTTAATGAAGGTTaGAAACATGACAGGCTGCCAGCTGTCTTCCCCTGT +
Preference number: 6 (lower is better)
Translates to: NEEAKIQNFNEG*KHDRLPAVFPC
Trigger: ACAGGGGAAGACAGCTGGCAGCCTGTCATGTTTCAAACCTTCATTAAAGTTCTGGATTTTGGCCTCTTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560966.5
CDS TCA 72 bp TTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACGATTT +
Preference number: 6 (lower is better)
Translates to: FVINPFKDSSGS*QVECIEILVRF
Trigger: AAATCGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398528.7
ENST00000558019.5
ENST00000559994.5
ENST00000560835.5
ENST00000561434.1
CDS TCA 72 bp TTTGTCATCAATCCATTCAAGGACTCGAGTGGCTCCTaGCAGGTCGAATGCATAGAAATCCTGGTACTAGTA +
Preference number: 6 (lower is better)
Translates to: FVINPFKDSSGS*QVECIEILVLV
Trigger: TACTAGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560182.5
ENST00000561447.5
CDS GCA 72 bp AGGCCACTGGTAACCAGCAATCTGGTATGTGGCACATaGTTTAGATCAAAGATAGACCTGTCTGAAAATCCT +
Preference number: 6 (lower is better)
Translates to: RPLVTSNLVCGT*FRSKIDLSENP
Trigger: AGGATTTTCAGACAGGTCTATCTTTGATCTAAAGCATGTGCCACATACCAGATTGCTGGTTACCAGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558521.5
ENST00000559126.5
ENST00000559178.5
ENST00000559452.5
ENST00000559994.5
ENST00000560088.5
ENST00000560252.5
ENST00000560835.5
ENST00000561329.5
ENST00000561447.5
CDS GCA 72 bp CAGCCAAGTTTTAGTTTTTATTTGGTTGTCTCCACCTaGTTGGTTAGCAGGGAGGTTCTCCTCTCTGTATTC +
Preference number: 6 (lower is better)
Translates to: QPSFSFYLVVST*LVSREVLLSVF
Trigger: GAATACAGAGAGGAGAACCTCCCTGCTAACCAAGCAGGTGGAGACAACCAAATAAAAACTAAAACTTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CCA 72 bp ACAGGAAGCTCCATTTGGGGCTTGGATGCCATGCTATaGTTGCTAATTCACCTTGTCTGCATTAAAGTAGAT +
Preference number: 6 (lower is better)
Translates to: TGSSIWGLDAML*LLIHLVCIKVD
Trigger: ATCTACTTTAATGCAGACAAGGTGAATTAGCAACCATAGCATGGCATCCAAGCCCCAAATGGAGCTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560252.5
ENST00000560966.5
CDS CAA 72 bp AAGATAGACCTGTCTGAAAATCCTCCATGGCGCACTTaGAAATCTCTTTCTGGGAATAAGCCCTTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: KIDLSENPPWRT*KSLSGNKPLFS
Trigger: GGAAAACAAGGGCTTATTCCCAGAAAGAGATTTCAAAGTGCGCCATGGAGGATTTTCAGACAGGTCTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558019.5
ENST00000558487.1
ENST00000558521.5
ENST00000559015.5
ENST00000559126.5
ENST00000559178.5
ENST00000559452.5
ENST00000559877.5
ENST00000559994.5
ENST00000560088.5
ENST00000560182.5
ENST00000560252.5
ENST00000560835.5
ENST00000560966.5
ENST00000561329.5
ENST00000561447.5
CDS CCA 72 bp AATAGAAGAGCATCTTTCTGTCCCGTATCTATTCCCTaGAGCAACTCCGGTAGAACTGTTACTTACATTAGT +
Preference number: 6 (lower is better)
Translates to: NRRASFCPVSIP*SNSGRTVTYIS
Trigger: ACTAATGTAAGTAACAGTTCTACCGGAGTTGCTCCAGGGAATAGATACGGGACAGAAAGATGCTCTTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558608.1
ENST00000559015.5
ENST00000560966.5
CDS CAA 90 bp TTTAGATCAAAGATAGACCTGTCTGAAAATCCTCCATGGCGCACTTaGAAATCTCTTTCTGGGAATAAGCCCTTGTTTTCCTTTACAGAA +
Preference number: 6 (lower is better)
Translates to: FRSKIDLSENPPWRT*KSLSGNKPLFSFTE
Trigger: TTCTGTAAAGGAAAACAAGGGCTTATTCCCAGAAAGAGATTTCAAAGTGCGCCATGGAGGATTTTCAGACAGGTCTATCTTTGATCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000398528.7
ENST00000434634.7
ENST00000558019.5
ENST00000558487.1
ENST00000558521.5
ENST00000559015.5
ENST00000559126.5
ENST00000559178.5
ENST00000559452.5
ENST00000559877.5
ENST00000559994.5
ENST00000560088.5
ENST00000560182.5
ENST00000560252.5
ENST00000560835.5
ENST00000560966.5
ENST00000561329.5
ENST00000561447.5