RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR72 (Homo sapiens)

Ensembl gene IDs: ENSG00000166415

Ensembl transcript IDs: ENST00000360509.10, ENST00000396328.5, ENST00000557913.5, ENST00000559418.5, ENST00000560036.1, ENST00000567224.1, ENST00000567575.1, ENST00000614174.4

Found 664 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGGCCTCCCATTAGACACATGCTGTCTTCCAGGGGTCCCAAATTaGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGTTA +
Preference number: 1 (lower is better)
Translates to: TGLPLDTCCLPGVPN*MGVSSGMLLQTDLL
Trigger: TAACAGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCTAATGGGAGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR GCA 90 bp TTCTCCTACCTGCCATCTGTAGGCTCCTTCTTGAGCAAACTACAGTaGGAGGTGATCTGGGGACTATTGTACATGAAGCCATGCAGCTTT +
Preference number: 1 (lower is better)
Translates to: FSYLPSVGSFLSKLQ*EVIWGLLYMKPCSF
Trigger: AAAGCTGCATGGCTTCATGTACAATAGTCCCCAGATCACCTCGCACTGTAGTTTGCTCAAGAAGGAGCCTACAGATGGCAGGTAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR CCA 90 bp CACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTaGCATGCTCTTACAGACAGACCTGTTAATTTCCAGTTTACCTTC +
Preference number: 1 (lower is better)
Translates to: HMLSSRGPKLDGCFQ*HALTDRPVNFQFTF
Trigger: GAAGGTAAACTGGAAATTAACAGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR CCA 90 bp TTTAACCCTCCAGGCTTTCCAGGTACTTTTTCCTGCAATATACAATaGAGCCAATGTGAAACTCAACAGCAAGTCAAAGAATCAAGGCTT +
Preference number: 1 (lower is better)
Translates to: FNPPGFPGTFSCNIQ*SQCETQQQVKESRL
Trigger: AAGCCTTGATTCTTTGACTTGCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAAAGCCTGGAGGGTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATACACAGGGGAGGGAATaGGGCTCTGACAAGCACAGC +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHTQGRE*GSDKHS
Trigger: GCTGTGCTTGTCAGAGCCTCATTCCCTCCCCTGTGT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTCCCAGCATAAGACCTaGGGCTGGTCCCATGCTCAA +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSQHKT*GWSHAQ
Trigger: TTGAGCATGGGACCAGCCTCAGGTCTTATGCTGGGA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCCCAGCATAAGACCTaGGGCTGGTCCCATGCTCAA +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSQHKT*GWSHAQ
Trigger: TTGAGCATGGGACCAGCCTCAGGTCTTATGCTGGGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR CAA 90 bp GACAGGCCTCCCATTAGACACATGCTGTCTTCCAGGGGTCCCAAATaGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGTT +
Preference number: 2 (lower is better)
Translates to: DRPPIRHMLSSRGPK*DGCFQWHALTDRPV
Trigger: AACAGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCTAATGGGAGGCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAGTACCAAGTGGTTATaGTCACCACGTACGTGGTCT +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSTKWL*SPRTWS
Trigger: AGACCACGTACGTGGTGATCATAACCACTTGGTACT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAACTACAGTGCGAGGTaGTCTGGGGACTATTGTACA +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHNYSAR*SGDYCT
Trigger: TGTACAATAGTCCCCAGATCACCTCGCACTGTAGTT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCAGTGCGAGGTGATCTaGGGACTATTGTACATGAAG +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHQCEVI*GLLYMK
Trigger: CTTCATGTACAATAGTCCCCAGATCACCTCGCACTG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCCCACCATAGGACCTaGGGCTGCTCCTATGCTCAG +
Preference number: 2 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSHHRT*GCSYAQ
Trigger: CTGAGCATAGGAGCAGCCTCAGGTCCTATGGTGGGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGGAGTCACACTCATTTaGCATCTTTATCCTGGTATG +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPGVTLI*HLYPGM
Trigger: CATACCAGGATAAAGATGTCAAATGAGTGTGACTCC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGGAGAAAGACAATTTTaGGTTTCTGGGTGTAGTACC +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPGERQF*VSGCST
Trigger: GGTACTACACCCAGAAACTCAAAATTGTCTTTCTCC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCCATGCAGCTTTGTCTaGAAGATACCTACTCAAGTA +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHPCSFV*KIPTQV
Trigger: TACTTGAGTAGGTATCTTTCAGACAAAGCTGCATGG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCCATGCAGCTTTGTCTaGAAGATACCTACTCAAGTA +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPPCSFV*KIPTQV
Trigger: TACTTGAGTAGGTATCTTTCAGACAAAGCTGCATGG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTTTGTGTCTGTGGACTaGCATTCCCTGTTGGAAATA +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPFVSVD*HSLLEI
Trigger: TATTTCCAACAGGGAATGCCAGTCCACAGACACAAA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTTAAATTTGTGTCTGTaGACTGGCATTCCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHLNLCL*TGIPCW
Trigger: CCAACAGGGAATGCCAGTCCACAGACACAAATTTAA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCCAGGTACTTTTTCCTaGAATATACAATGGAGCCAA +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPPGTFS*NIQWSQ
Trigger: TTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCCAGGTACTTTTTCCTaGAATATACAATGGAGCCAA +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHPGTFS*NIQWSQ
Trigger: TTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGGATCAATTGTGATATaGTGTAAGTTGATTCCCCTT +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPGSIVI*CKLIPL
Trigger: AAGGGGAATCAACTTACAGCATATCACAATTGATCC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGGATCAATTGTGATATaGTGTAAGTTGATTCCCCTT +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHGSIVI*CKLIPL
Trigger: AAGGGGAATCAACTTACAGCATATCACAATTGATCC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAACTGTGTGGCAATTTaGTATTTCAAGTCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPNCVAI*YFKSSH
Trigger: ATGAGAGGACTTGAAATAGCAAATTGCCACACAGTT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCCTGCAATATACAATaGAGCCAATGTGAAACTCAA +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSCNIQ*SQCETQ
Trigger: TTGAGTTTCACATTGGCTCCATTGTATATTGCAGGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGTTGACAACATTTCATaGTTAGGGATGAGATTTACT +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHVDNIS*LGMRFT
Trigger: AGTAAATCTCATCCCTAAGCATGAAATGTTGTCAAC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGATTCTAACATGCGATaGCGAAAAATCCTAACATTT +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHDSNMR*RKILTF
Trigger: AAATGTTAGGATTTTTCGGCATCGCATGTTAGAATC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAATGTCCTTGACAACTaGTATACAACAAGCAAGAAA +
Preference number: 2 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPNVLDN*YTTSKK
Trigger: TTTCTTGCTTGTTGTATACCAGTTGTCAAGGACATT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATATCCAGTTAACTGTGTaGCAATTTGCTATTTCAAGT +
Preference number: 2 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHIQLTV*QFAISS
Trigger: ACTTGAAATAGCAAATTGCCACACAGTTAACTGGAT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTTGTGTCTGTGGACTaGCATTCCCTGTTGGAAATA +
Preference number: 2 (lower is better)
Translates to: MITTYVVYPVNCVAICYFFVSVD*HSLLEI
Trigger: TATTTCCAACAGGGAATGCCAGTCCACAGACACAAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCAACAAGATCAACCTTaGGCTAAAGACATTAGCCTC +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSQQDQP*AKDISL
Trigger: GAGGCTAATGTCTTTAGCTCAAGGTTGATCTTGTTG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGGAGTCACACTCATTTaGCATCTTTATCCTGGTATG +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSGVTLI*HLYPGM
Trigger: CATACCAGGATAAAGATGTCAAATGAGTGTGACTCC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGGAGAAAGACAATTTTaGGTTTCTGGGTGTAGTACC +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSGERQF*VSGCST
Trigger: GGTACTACACCCAGAAACTCAAAATTGTCTTTCTCC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTTAAATTTGTGTCTGTaGACTGGCATTCCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSLNLCL*TGIPCW
Trigger: CCAACAGGGAATGCCAGTCCACAGACACAAATTTAA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAAACACACTTGCGTATaGATATTAGGAGAGCATTGC +
Preference number: 2 (lower is better)
Translates to: MITTYVVYPVNCVAICYFKHTCV*ILGEHC
Trigger: GCAATGCTCTCCTAATATCCATACGCAAGTGTGTTT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTGTCATAAACACACTTaGGTATGGATATTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: MITTYVVYPVNCVAICYFCHKHT*VWILGE
Trigger: CTCTCCTAATATCCATACGCAAGTGTGTTTATGACA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCAGTCAAGCTTCTTTCTaGGAAAAGACCTACAAGAGT +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSQASF*EKTYKS
Trigger: ACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATTAAATTTGTGTCTGTaGACTGGCATTCCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLNLCL*TGIPCW
Trigger: CCAACAGGGAATGCCAGTCCACAGACACAAATTTAA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAATGTCCTTGACAACTaGTATACAACAAGCAAGAAA +
Preference number: 2 (lower is better)
Translates to: MITTYVVYPVNCVAICYFNVLDN*YTTSKK
Trigger: TTTCTTGCTTGTTGTATACCAGTTGTCAAGGACATT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR CAA 90 bp GAGAGGACATACACTTATTTGATATTGCCATCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCCTTGACAACTGGTATACAACAAGCA +
Preference number: 2 (lower is better)
Translates to: ERTYTYLILPSFKML*GVLIMSLTTGIQQA
Trigger: TGCTTGTTGTATACCAGTTGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAAATAAGTGTATGTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCAACAAGATCAACCTTaGGCTAAAGACATTAGCCTC +
Preference number: 2 (lower is better)
Translates to: HTCVWILGEHCLNISKTIQQDQP*AKDISL
Trigger: GAGGCTAATGTCTTTAGCTCAAGGTTGATCTTGTTG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGGAGTCACACTCATTTaGCATCTTTATCCTGGTATG +
Preference number: 2 (lower is better)
Translates to: HTCVWILGEHCLNISKTIGVTLI*HLYPGM
Trigger: CATACCAGGATAAAGATGTCAAATGAGTGTGACTCC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCAACAGTACAAGGTTaGTCACTGTTATACTTTGTA +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSTVQG*SLLYFV
Trigger: TACAAAGTATAACAGTGACCAACCTTGTACTGTTGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCAATTGAAGTGACTTaGACTTCCCTATTAGATACA +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSIEVT*TSLLDT
Trigger: TGTATCTAATAGGGAAGTCCAAGTCACTTCAATTGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCAATGTCCTTGACAACTaGTATACAACAAGCAAGAAA +
Preference number: 2 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSNVLDN*YTTSKK
Trigger: TTTCTTGCTTGTTGTATACCAGTTGTCAAGGACATT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAGTCAAGCTTCTTTCTaGGAAAAGACCTACAAGAGT +
Preference number: 2 (lower is better)
Translates to: HTCVWILGEHCLNISKTISQASF*EKTYKS
Trigger: ACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGTTGACAACATTTCATaGTTAGGGATGAGATTTACT +
Preference number: 2 (lower is better)
Translates to: PASQASFWEKTYKSLYLIVDNIS*LGMRFT
Trigger: AGTAAATCTCATCCCTAAGCATGAAATGTTGTCAAC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATCAACAGTACAAGGTTaGTCACTGTTATACTTTGTA +
Preference number: 2 (lower is better)
Translates to: PASQASFWEKTYKSLYLISTVQG*SLLYFV
Trigger: TACAAAGTATAACAGTGACCAACCTTGTACTGTTGA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATCAATTGAAGTGACTTaGACTTCCCTATTAGATACA +
Preference number: 2 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSIEVT*TSLLDT
Trigger: TGTATCTAATAGGGAAGTCCAAGTCACTTCAATTGA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGTTGACAACATTTCATaGTTAGGGATGAGATTTACT +
Preference number: 2 (lower is better)
Translates to: HTCVWILGEHCLNISKTIVDNIS*LGMRFT
Trigger: AGTAAATCTCATCCCTAAGCATGAAATGTTGTCAAC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTCAACAGTACAAGGTTaGTCACTGTTATACTTTGTA +
Preference number: 2 (lower is better)
Translates to: HTCVWILGEHCLNISKTISTVQG*SLLYFV
Trigger: TACAAAGTATAACAGTGACCAACCTTGTACTGTTGA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTCAATTGAAGTGACTTaGACTTCCCTATTAGATACA +
Preference number: 2 (lower is better)
Translates to: HTCVWILGEHCLNISKTISIEVT*TSLLDT
Trigger: TGTATCTAATAGGGAAGTCCAAGTCACTTCAATTGA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGTGATCTGGGGACTATaGTACATGAAGCCATGCAGC +
Preference number: 3 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHVIWGL*YMKPCS
Trigger: GCTGCATGGCTTCATGTACAATAGTCCCCAGATCAC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCTGTAGGCTCCTTCTaGAGCAAACTACAGTGCGAG +
Preference number: 3 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSVGSF*SKLQCE
Trigger: CTCGCACTGTAGTTTGCTCAAGAAGGAGCCTACAGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR GCA 72 bp AGGAGTTGTACTAGGACAGGCCTCCCATTAGACACATaGTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTT +
Preference number: 3 (lower is better)
Translates to: RSCTRTGLPLDT*CLPGVPNWMGV
Trigger: AACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCTAATGGGAGGCCTGTCCTAGTACAACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR GCA 72 bp CTGCCATCTGTAGGCTCCTTCTTGAGCAAACTACAGTaGGAGGTGATCTGGGGACTATTGTACATGAAGCCA +
Preference number: 3 (lower is better)
Translates to: LPSVGSFLSKLQ*EVIWGLLYMKP
Trigger: TGGCTTCATGTACAATAGTCCCCAGATCACCTCGCACTGTAGTTTGCTCAAGAAGGAGCCTACAGATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR CCA 72 bp GGCTCCTTCTTGAGCAAACTACAGTGCGAGGTGATCTaGGGACTATTGTACATGAAGCCATGCAGCTTTGTC +
Preference number: 3 (lower is better)
Translates to: GSFLSKLQCEVI*GLLYMKPCSFV
Trigger: GACAAAGCTGCATGGCTTCATGTACAATAGTCCCCAGATCACCTCGCACTGTAGTTTGCTCAAGAAGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR CCA 72 bp CCATTAGACACATGCTGTCTTCCAGGGGTCCCAAATTaGATGGGTGTTTCCAGTGGCATGCTCTTACAGACA +
Preference number: 3 (lower is better)
Translates to: PLDTCCLPGVPN*MGVSSGMLLQT
Trigger: TGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR CCA 72 bp TCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTaGCATGCTCTTACAGACAGACCTGTTAATTTCCAG +
Preference number: 3 (lower is better)
Translates to: SSRGPKLDGCFQ*HALTDRPVNFQ
Trigger: CTGGAAATTAACAGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGGGAGTCACACTCATTaGACATCTTTATCCTGGTAT +
Preference number: 3 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPGSHTH*TSLSWY
Trigger: ATACCAGGATAAAGATGTCAAATGAGTGTGACTCCC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGGGAGTCACACTCATTaGACATCTTTATCCTGGTAT +
Preference number: 3 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHGSHTH*TSLSWY
Trigger: ATACCAGGATAAAGATGTCAAATGAGTGTGACTCCC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTTAATAGTGCTCACATaGCTTTCTAGCACCTCTGGA +
Preference number: 3 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHLIVLT*LSSTSG
Trigger: TCCAGAGGTGCTAGAAAGCAATGTGAGCACTATTAA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCC +
Preference number: 3 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSFKML*GVLIMS
Trigger: GGACATTATAAGGACTCCCAAAAGCATTTTGAAGGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCTACAGCCTAATAACTaGACCAATAACAACAATGCT +
Preference number: 3 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHLQPNN*TNNNNA
Trigger: AGCATTGTTGTTATTGGTCAAGTTATTAGGCTGTAG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGTCCTTATAATGTCCTaGACAACTGGTATACAACAA +
Preference number: 3 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHVLIMS*TTGIQQ
Trigger: TTGTTGTATACCAGTTGTCAAGGACATTATAAGGAC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAACAGACTAGTGAATTaGTGTCATAAACACACTTGC +
Preference number: 3 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPNRLVN*CHKHTC
Trigger: GCAAGTGTGTTTATGACACAAATTCACTAGTCTGTT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCC +
Preference number: 3 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSFKML*GVLIMS
Trigger: GGACATTATAAGGACTCCCAAAAGCATTTTGAAGGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAATGGAACTGGGTATTaGTTGACAACATTTCATGCT +
Preference number: 3 (lower is better)
Translates to: MITTYVVYPVNCVAICYFNGTGY*LTTFHA
Trigger: AGCATGAAATGTTGTCAACAAATACCCAGTTCCATT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAACAGACTAGTGAATTaGTGTCATAAACACACTTGC +
Preference number: 3 (lower is better)
Translates to: MITTYVVYPVNCVAICYFNRLVN*CHKHTC
Trigger: GCAAGTGTGTTTATGACACAAATTCACTAGTCTGTT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGGGAGTCACACTCATTaGACATCTTTATCCTGGTAT +
Preference number: 3 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTGSHTH*TSLSWY
Trigger: ATACCAGGATAAAGATGTCAAATGAGTGTGACTCCC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR TCA 72 bp CCTAGTTCACATCTATATGGCCAACAAGATCAACCTTaGGCTAAAGACATTAGCCTCAATGTCATTAGAAGT +
Preference number: 3 (lower is better)
Translates to: PSSHLYGQQDQP*AKDISLNVIRS
Trigger: ACTTCTAATGACATTGAGGCTAATGTCTTTAGCTCAAGGTTGATCTTGTTGGCCATATAGATGTGAACTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR TCA 72 bp AGGCTGCTCCTATGCTCAGAGATATGTTTCTTCAATTaGAGTGACTTGGACTTCCCTATTAGATACATAGAT +
Preference number: 3 (lower is better)
Translates to: RLLLCSEICFFN*SDLDFPIRYID
Trigger: ATCTATGTATCTAATAGGGAAGTCCAAGTCACTTCAATTGAAGAAACATATCTCTGAGCATAGGAGCAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACTCAACAGTACAAGGTaGGTCACTGTTATACTTTGT +
Preference number: 3 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLNSTR*VTVILC
Trigger: ACAAAGTATAACAGTGACCAACCTTGTACTGTTGAG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACTACAGCCTAATAACTaGACCAATAACAACAATGCT +
Preference number: 3 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLQPNN*TNNNNA
Trigger: AGCATTGTTGTTATTGGTCAAGTTATTAGGCTGTAG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAAAGCAGTATTAAATTaGTGTCTGTGGACTGGCATT +
Preference number: 3 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTKAVLN*CLWTGI
Trigger: AATGCCAGTCCACAGACACAAATTTAATACTGCTTT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAAAGCAGTATTAAATTaGTGTCTGTGGACTGGCATT +
Preference number: 3 (lower is better)
Translates to: PASQASFWEKTYKSLYLIKAVLN*CLWTGI
Trigger: AATGCCAGTCCACAGACACAAATTTAATACTGCTTT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAATGGAACTGGGTATTaGTTGACAACATTTCATGCT +
Preference number: 3 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTNGTGY*LTTFHA
Trigger: AGCATGAAATGTTGTCAACAAATACCCAGTTCCATT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCTCAACAGTACAAGGTaGGTCACTGTTATACTTTGT +
Preference number: 3 (lower is better)
Translates to: HTCVWILGEHCLNISKTILNSTR*VTVILC
Trigger: ACAAAGTATAACAGTGACCAACCTTGTACTGTTGAG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCTACAGCCTAATAACTaGACCAATAACAACAATGCT +
Preference number: 3 (lower is better)
Translates to: HTCVWILGEHCLNISKTILQPNN*TNNNNA
Trigger: AGCATTGTTGTTATTGGTCAAGTTATTAGGCTGTAG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAATGGAACTGGGTATTaGTTGACAACATTTCATGCT +
Preference number: 3 (lower is better)
Translates to: HTCVWILGEHCLNISKTINGTGY*LTTFHA
Trigger: AGCATGAAATGTTGTCAACAAATACCCAGTTCCATT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGTCCTTATAATGTCCTaGACAACTGGTATACAACAA +
Preference number: 3 (lower is better)
Translates to: HTCVWILGEHCLNISKTIVLIMS*TTGIQQ
Trigger: TTGTTGTATACCAGTTGTCAAGGACATTATAAGGAC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR TCA 72 bp CACACTTTAATCTACTTTAAGGGAGTCACACTCATTTaGCATCTTTATCCTGGTATGTTTATTCAGATCATC +
Preference number: 3 (lower is better)
Translates to: HTLIYFKGVTLI*HLYPGMFIQII
Trigger: GATGATCTGAATAAACATACCAGGATAAAGATGTCAAATGAGTGTGACTCCCTTAAAGTAGATTAAAGTGTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR GCA 72 bp TTAAACAGACTAGTGAATTTGTGTCATAAACACACTTaGGTATGGATATTAGGAGAGCATTGCTTGAATATC +
Preference number: 3 (lower is better)
Translates to: LNRLVNLCHKHT*VWILGEHCLNI
Trigger: GATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTGTTTATGACACAAATTCACTAGTCTGTTTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
3UTR CCA 72 bp TTCAGTTTTAGAATTCCTGCTAGTCAAGCTTCTTTCTaGGAAAAGACCTACAAGAGTTTATACTTAATAAGG +
Preference number: 3 (lower is better)
Translates to: FSFRIPASQASF*EKTYKSLYLIR
Trigger: CCTTATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGGAATTCTAAAACTGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGCGAATCCTGAGCCGTaGGGCGGAGGAGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPANPEP*GGGAAE
Trigger: CTCTGCCGCTCCTCCGCCCCACGGCTCAGGATTCGC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360509.10
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTCCCACCATAGGACCTaGGGCTGCTCCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSHHRT*GCSYAQ
Trigger: CTGAGCATAGGAGCAGCCTCAGGTCCTATGGTGGGA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGAGGGAATGAGGCTCTaGCAAGCACAGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHEGMRL*QAQQAH
Trigger: GTGTGCTTGCTGTGCTTGTCAGAGCCTCATTCCCTC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGAGGGAATGAGGCTCTaGCAAGCACAGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPEGMRL*QAQQAH
Trigger: GTGTGCTTGCTGTGCTTGTCAGAGCCTCATTCCCTC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCTCACAGGAAAAAGGTaGTTCCGGGCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHLTGKR*FRACRR
Trigger: CCTCCTGCATGCCCGGAAGCACCTTTTTCCTGTGAG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAGGAGAGCCACGGAATaGTCACCGCACACACAGCAA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPRRATE*SPHTQQ
Trigger: TTGCTGTGTGTGCGGTGACCATTCCGTGGCTCTCCT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCCAGGGGTCCCAAATTaGATGGGTGTTTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHPGVPN*MGVSSG
Trigger: GCCACTGGAAACACCCATCCAATTTGGGACCCCTGG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCAGAGTGCCACTGCCTaGAGGGAAGTCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPQSATA*REVLIL
Trigger: CAAAATGAGGACTTCCCTGCAGGCAGTGGCACTCTG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCTTGACCGGGCTGACTaGAGCTGGCTCGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLDRAD*SWLGGS
Trigger: GGACCCTCCGAGCCAGCTCCAGTCAGCCCGGTCAAG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGAGCTCACCAGCTACTaGTACCACCAAGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPELTSY*YHQERI
Trigger: GATTCTCTCTTGGTGGTATCAGTAGCTGGTGAGCTC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCATGAAGACTCCACCTaGAGACCAGGGCAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPHEDST*RPGQGN
Trigger: ATTACCTTGCCCTGGTCTGCAGGTGGAGTCTTCATG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPFELLS*LTGLTG
Trigger: TCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCCAGAAGTCTTGCTTTaGCAGCATTCAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHPEVLL*QHSKPG
Trigger: CCCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
3UTR CAA 72 bp CCCATTAGACACATGCTGTCTTCCAGGGGTCCCAAATaGGATGGGTGTTTCCAGTGGCATGCTCTTACAGAC +
Preference number: 4 (lower is better)
Translates to: PIRHMLSSRGPK*DGCFQWHALTD
Trigger: GTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCTAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTATCAGTAACCTTACATaGAGACTCCACCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPISNLT*RLHLQT
Trigger: GGTCTGCAGGTGGAGTCTTCATGTAAGGTTACTGAT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCCATGGACACTGGTTaGCTATTGACGGGTATCTTT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHAMDTG*LLTGIF
Trigger: AAAGATACCCGTCAATAGTCAACCAGTGTCCATGGC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGCCATGGACACTGGTTaGCTATTGACGGGTATCTTT +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPAMDTG*LLTGIF
Trigger: AAAGATACCCGTCAATAGTCAACCAGTGTCCATGGC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHEVCRV*VAVMLD
Trigger: GTCAAGCATGACAGCAACTCAAACTCGGCAAACTTC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTTTGCTATCCATGAATaGTGCCTTGGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPFAIHE*CLGSPG
Trigger: TCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAGTACCAAGTGGTTATaGTCACCACGTACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSTKWL*SPRTWS
Trigger: AGACCACGTACGTGGTGATCATAACCACTTGGTACT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGGGGACTATTGTACATaGAGCCATGCAGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHGDYCT*SHAALS
Trigger: AGACAAAGCTGCATGGCTTCATGTACAATAGTCCCC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAACTACAGTGCGAGGTaGTCTGGGGACTATTGTACA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPNYSAR*SGDYCT
Trigger: TGTACAATAGTCCCCAGATCACCTCGCACTGTAGTT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGAAGTCCCTTGCTCTTaGCAAACATGTTACCGAAGC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHEVPCS*QTCYRS
Trigger: GCTTCGGTAACATGTTTGGCAAGAGCAAGGGACTTC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCTTCTTCTCCACTGTaGTCTTGGCTCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSSSPL*SWLFSG
Trigger: TCCTGAGAAGAGCCAAGAGCACAGTGGAGAAGAAGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGGGCTGACTGGAGTTTaGAGAGGCAAAGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPGLTGV*RGKVFL
Trigger: TAGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCCATTTAAGACACCTTaGAGGGGCAGACCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPPFKTP*RGRPLL
Trigger: TAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCATGGCAGTGATGCTGTaGGGAGGGGCCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFMAVML*GGAFCP
Trigger: GGGACAGAAGGCCCCTCCCCACAGCATCACTGCCAT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCTTGAAGAGTCCAGGTaGCAGTTACTGGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPLEESR*QLLVSL
Trigger: GAGAGATACCAGTAACTGCCACCTGGACTCTTCAAG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCTCTGCCATGGACACTaGTTGACTATTGACGGGTAT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHLCHGH*LTIDGY
Trigger: ATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTCCTGTCATCCGGAATaGGCAGTGGTAATAACAGAT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSCHPE*AVVITD
Trigger: ATCTGTTATTACCACTGCTCATTCCGGATGACAGGA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCTCTTCATGTGTTGTTaGACTTCCGCCAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPLFMCC*TSAKRT
Trigger: TGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAGGTGCTTCCGGGCATaGAGGAGGCAACTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFRCFRA*RRQLFP
Trigger: GGGAAAGAGTTGCCTCCTGCATGCCCGGAAGCACCT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATATTGCTTCAGTTACCTaGACAGACTGGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHIASVT*TDWSLQ
Trigger: TTGGAGAGACCAGTCTGTGCAGGTAACTGAAGCAAT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTATTGCTTCAGTTACCTaGACAGACTGGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPIASVT*TDWSLQ
Trigger: TTGGAGAGACCAGTCTGTGCAGGTAACTGAAGCAAT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATACAGTTACCATTCTCTaGCATGGACACTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHTVTIL*HGHWLT
Trigger: AGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGTCACAATCGTTCGCTaGTCATCAGTGATCATGATG +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHVTIVR*SSVIMM
Trigger: CATCATGATCACTGATGACCAGCGAACGATTGTGAC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGTGTCTCTGAGGCAATaGGAAGTACAGACTTCACAA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPVSLRQ*EVQTSQ
Trigger: TTGTGAAGTCTGTACTTCCCATTGCCTCAGAGACAC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGTTACCTGCACAGACTaGTCTCTCCAACAGGAAATT +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPVTCTD*SLQQEI
Trigger: AATTTCCTGTTGGAGAGACCAGTCTGTGCAGGTAAC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTTCCCAGATATAAACTaGGTCATCTGCACATCCAAC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHFPDIN*VICTSN
Trigger: GTTGGATGTGCAGATGACTCAGTTTATATCTGGGAA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTTGCTGTGTCTATTGTaGGACTGGCATCTACTTTTC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHLLCLL*DWHLLF
Trigger: GAAAAGTAGATGCCAGTCTCACAATAGACACAGCAA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCAACAAGATCAACCTTaGGCTAAAGACATTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPQQDQP*AKDISL
Trigger: GAGGCTAATGTCTTTAGCTCAAGGTTGATCTTGTTG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCCCACCATAGGACCTaGGGCTGCTCCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSHHRT*GCSYAQ
Trigger: CTGAGCATAGGAGCAGCCTCAGGTCCTATGGTGGGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGGAGAAAGACAATTTTaGGTTTCTGGGTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHGERQF*VSGCST
Trigger: GGTACTACACCCAGAAACTCAAAATTGTCTTTCTCC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCCCCAGAGTGCCACTaGCTGCAGGGAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSPECH*LQGSPH
Trigger: ATGAGGACTTCCCTGCAGGCAGTGGCACTCTGGGGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGAGAACAGCTTGTATTaGTTCAGTTACCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPENSLY*FSYLHR
Trigger: TCTGTGCAGGTAACTGAAGCAATACAAGCTGTTCTC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGAGAACCATCAAACTTaGATACAGGAACATCAGGGA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPENHQT*IQEHQG
Trigger: TCCCTGATGTTCCTGTATCCAAGTTTGATGGTTCTC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGCAGCATTCAAAGCCTaGGTAATGATAATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPAAFKA*VMIIVP
Trigger: TGGGACAATTATCATTACCCAGGCTTTGAATGCTGC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCCAGGGGTCCCAAATTaGATGGGTGTTTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFPGVPN*MGVSSG
Trigger: GCCACTGGAAACACCCATCCAATTTGGGACCCCTGG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCTCTTTCCCTCAAGGTaGAGGAGAGCCACGGAATGG +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSLFPSR*RRATEW
Trigger: CCATTCCGTGGCTCTCCTTCACCTTGAGGGAAAGAG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGTATACTTTCCATTCTaGAAGAACTGCCAACTCTAC +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPVYFPF*KNCQLY
Trigger: GTAGAGTTGGCAGTTCTTTCAGAATGGAAAGTATAC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTTTAGAGAAGTCCCTTaGTCTTGCCAAACATGTTAC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHFREVP*SCQTCY
Trigger: GTAACATGTTTGGCAAGAGCAAGGGACTTCTCTAAA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAACGGCCTGGACACGCTaGCGAGGAGCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTTAWTR*RGASAF
Trigger: AAAAGCAGAGGCTCCTCGGCAGCGTGTCCAGGCCGT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAACGGCCTGGACACGCTaGCGAGGAGCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLITAWTR*RGASAF
Trigger: AAAAGCAGAGGCTCCTCGGCAGCGTGTCCAGGCCGT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCTCCCATTAGACACATaGTGTCTTCCAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLPLDT*CLPGVP
Trigger: TGGGACCCCTGGAAGACAGCATGTGTCTAATGGGAG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAATGGCAGTGATGCTGTaGGGAGGGGCCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTMAVML*GGAFCP
Trigger: GGGACAGAAGGCCCCTCCCCACAGCATCACTGCCAT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAATGAAGTGACACTTTaGTGGTGGCCTTTAAGAACT +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPNEVTL*WWPLRT
Trigger: AGTTCTTAAAGGCCACCACCAAAGTGTCACTTCATT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCTCCACTGTGCTCTTaGCTCTTCTCAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSPLCS*LFSGPH
Trigger: GTGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAATGCTGTTGATAGATaGGGAAAGATCCCATACTTT +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPNAVDR*GKIPYF
Trigger: AAAGTATGGGATCTTTCCTCATCTATCAACAGCATT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAATGCTGTTGATAGATaGGGAAAGATCCCATACTTT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHNAVDR*GKIPYF
Trigger: AAAGTATGGGATCTTTCCTCATCTATCAACAGCATT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAGACTTCACAAGCTGTaGATCATCACAACAATTAAG +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPRLHKL*IITTIK
Trigger: CTTAATTGTTGTGATGATTCACAGCTTGTGAAGTCT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGACCTTTGCTATCCATaGATGATGCCTTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFDLCYP*MMPWLT
Trigger: GGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATCCCACCATAGGACCTaGGGCTGCTCCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLISHHRT*GCSYAQ
Trigger: CTGAGCATAGGAGCAGCCTCAGGTCCTATGGTGGGA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTATGCCGCTCCCATCTaGGCCCACCTGTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNYAAPI*AHLFSS
Trigger: GCTGCTGAACAGGTGGGCTCAGATGGGAGCGGCATA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559418.5
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCAGAGTGCCACTGCCTaGAGGGAAGTCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSQSATA*REVLIL
Trigger: CAAAATGAGGACTTCCCTGCAGGCAGTGGCACTCTG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATCCCCAGAGTGCCACTaGCTGCAGGGAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSPECH*LQGSPH
Trigger: ATGAGGACTTCCCTGCAGGCAGTGGCACTCTGGGGA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACTTCTGTCCCCAGAGTaGCACTGCCTGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLILLSPE*HCLQGS
Trigger: ACTTCCCTGCAGGCAGTGGCACTCTGGGGACAGAAG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGACTACAGCAGTTCCTaGCCCATCTTTAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFDYSSS*PIFKPR
Trigger: TCTGGGCTTAAAGATGGGGCAGGAACTGCTGTAGTC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATACACAGCAAATTATCTaGTCACCCCTTAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHTQQII*SPLSLN
Trigger: GTTTAAACTAAGGGGTGAGCAGATAATTTGCTGTGT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAGGTGCTTCCGGGCATaGAGGAGGCAACTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIRCFRA*RRQLFP
Trigger: GGGAAAGAGTTGCCTCCTGCATGCCCGGAAGCACCT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAGGTGCTTCCGGGCATaGAGGAGGCAACTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTRCFRA*RRQLFP
Trigger: GGGAAAGAGTTGCCTCCTGCATGCCCGGAAGCACCT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFFELLS*LTGLTG
Trigger: TCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACGGCCTGGACACGCTaGCGAGGAGCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTAWTR*RGASAF
Trigger: AAAAGCAGAGGCTCCTCGGCAGCGTGTCCAGGCCGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATGGCAGTGATGCTGTaGGGAGGGGCCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNMAVML*GGAFCP
Trigger: GGGACAGAAGGCCCCTCCCCACAGCATCACTGCCAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGACAACATCCAACTTTaGTCTAATTTCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHDNIQL*SNFEER
Trigger: TCTCTCTTCGAAATTAGACCAAAGTTGGATGTTGTC...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATATTTTCCAATCCTCTTaGAATTCCAACCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHIFQSS*NSNLIW
Trigger: CCAAATCAGGTTGGAATTCCAAGAGGATTGGAAAAT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTCCTGCAATATACAATaGAGCCAATGTGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSCNIQ*SQCETQ
Trigger: TTGAGTTTCACATTGGCTCCATTGTATATTGCAGGA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAGAATGTTTGATACCTaGGGCTACTTTTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPRMFDT*GYFLTV
Trigger: CACAGTTAAAAAGTAGCCCCAGGTATCAAACATTCT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTATTTTGGGCGAATCCTaGGACCCGGCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIILGES*DPAARP
Trigger: AGGTCGGGCTGCCGGGTCCCAGGATTCGCCCAAAAT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557913.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGGGAAGTCCTCATTTTaGGCGAATCCTGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIGKSSF*ANPGTR
Trigger: CCGGGTCCCAGGATTCGCCCAAAATGAGGACTTCCC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCAGATGAGGATTCTGTaGGCAGCAATCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFQMRIL*AAITSP
Trigger: TGGAGAAGTGATTGCTGCTCACAGAATCCTCATCTG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTTGCTATCCATGAATaGTGCCTTGGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFFAIHE*CLGSPG
Trigger: TCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGACCTTTGCTATCCATaGATGATGCCTTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSDLCYP*MMPWLT
Trigger: GGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTCCCACCATAGGACCTaGGGCTGCTCCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTISHHRT*GCSYAQ
Trigger: CTGAGCATAGGAGCAGCCTCAGGTCCTATGGTGGGA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATCCCAGCATAAGACCTaGGGCTGGTCCCATGCTCAA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSQHKT*GWSHAQ
Trigger: TTGAGCATGGGACCAGCCTCAGGTCTTATGCTGGGA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATCCCAGCATAAGACCTaGGGCTGGTCCCATGCTCAA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLISQHKT*GWSHAQ
Trigger: TTGAGCATGGGACCAGCCTCAGGTCTTATGCTGGGA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGAGGGAATGAGGCTCTaGCAAGCACAGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIEGMRL*QAQQAH
Trigger: GTGTGCTTGCTGTGCTTGTCAGAGCCTCATTCCCTC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACACAGGGGAGGGAATaGGGCTCTGACAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTQGRE*GSDKHS
Trigger: GCTGTGCTTGTCAGAGCCTCATTCCCTCCCCTGTGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAACTACAGTGCGAGGTaGTCTGGGGACTATTGTACA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFNYSAR*SGDYCT
Trigger: TGTACAATAGTCCCCAGATCACCTCGCACTGTAGTT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTTCTGTCCCCAGAGTaGCACTGCCTGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLLSPE*HCLQGS
Trigger: ACTTCCCTGCAGGCAGTGGCACTCTGGGGACAGAAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGGTGCTTCCGGGCATaGAGGAGGCAACTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRCFRA*RRQLFP
Trigger: GGGAAAGAGTTGCCTCCTGCATGCCCGGAAGCACCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATATTAAGAATAATTCGTaGTCTTTCTCCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHIKNNS*SFSCLM
Trigger: CATGAGACAGGAGAAAGAGCACGAATTATTCTTAAT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCTTCTTCTCCACTGTaGTCTTGGCTCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSSSPL*SWLFSG
Trigger: TCCTGAGAAGAGCCAAGAGCACAGTGGAGAAGAAGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAGACAGAAACAATTTTaGTGTGTCTATTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHRQKQF*CVYCET
Trigger: AGTCTCACAATAGACACAGCAAAATTGTTTCTGTCT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTGAGCAAACTACAGTaGGAGGTGATCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLSKLQ*EVIWGL
Trigger: TAGTCCCCAGATCACCTCGCACTGTAGTTTGCTCAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCCAGGTGGCAGTTACTaGTATCTCTCTAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSPGGSY*YLSRRT
Trigger: GGTTCTCCTAGAGAGATACCAGTAACTGCCACCTGG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAGGAGAGCCACGGAATaGTCACCGCACACACAGCAA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIRRATE*SPHTQQ
Trigger: TTGCTGTGTGTGCGGTGACCATTCCGTGGCTCTCCT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCAAGCTGGTAGGGGCTaGAGGATCTCTGTTCTATAC +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSQAGRG*RISVLY
Trigger: GTATAGAACAGAGATCCTCCAGCCCCTACCAGCTTG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCTCTGCCATGGACACTaGTTGACTATTGACGGGTAT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLCHGH*LTIDGY
Trigger: ATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCATGTCCTCCACGTCTTaGAAGTTTGCCGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFMSSTS*KFAEFE
Trigger: CTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCAACAGTACAAGGTTaGTCACTGTTATACTTTGTA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSTVQG*SLLYFV
Trigger: TACAAAGTATAACAGTGACCAACCTTGTACTGTTGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCAATTGAAGTGACTTaGACTTCCCTATTAGATACA +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSIEVT*TSLLDT
Trigger: TGTATCTAATAGGGAAGTCCAAGTCACTTCAATTGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTATCCAGTTAACTGTGTaGCAATTTGCTATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPIQLTV*QFAISS
Trigger: ACTTGAAATAGCAAATTGCCACACAGTTAACTGGAT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACCAGGGGTCCCAAATTaGATGGGTGTTTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIPGVPN*MGVSSG
Trigger: GCCACTGGAAACACCCATCCAATTTGGGACCCCTGG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCAGATGAGGATTCTGTaGGCAGCAATCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSQMRIL*AAITSP
Trigger: TGGAGAAGTGATTGCTGCTCACAGAATCCTCATCTG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAGGGTATATGCTTTTTaGAAGCCCACTGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFRVYAF*KPTVQQ
Trigger: CTGCTGAACAGTGGGCTTTCAAAAAGCATATACCCT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACCACAAGATCACACATaGGTCCAGGTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTPQDHT*VQVPRQ
Trigger: TTGTCTGGGGACCTGGACTCATGTGTGATCTTGTGG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTCTTTCCCTCAAGGTaGAGGAGAGCCACGGAATGG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLFPSR*RRATEW
Trigger: CCATTCCGTGGCTCTCCTTCACCTTGAGGGAAAGAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCTCTTCATGTGTTGTTaGACTTCCGCCAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLFMCC*TSAKRT
Trigger: TGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGGGGACTATTGTACATaGAGCCATGCAGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSGDYCT*SHAALS
Trigger: AGACAAAGCTGCATGGCTTCATGTACAATAGTCCCC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCTCACAGGAAAAAGGTaGTTCCGGGCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTILTGKR*FRACRR
Trigger: CCTCCTGCATGCCCGGAAGCACCTTTTTCCTGTGAG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTCACAGGAAAAAGGTaGTTCCGGGCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLTGKR*FRACRR
Trigger: CCTCCTGCATGCCCGGAAGCACCTTTTTCCTGTGAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCACAGTTACCATTCTCTaGCATGGACACTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFTVTIL*HGHWLT
Trigger: AGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACTCCCATTAGACACATaGTGTCTTCCAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLPLDT*CLPGVP
Trigger: TGGGACCCCTGGAAGACAGCATGTGTCTAATGGGAG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGGGAAGTCCTCATTTTaGGCGAATCCTGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNGKSSF*ANPEPW
Trigger: CCACGGCTCAGGATTCGCCCAAAATGAGGACTTCCC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360509.10
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGGAGAGCCACGGAATaGTCACCGCACACACAGCAA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRRATE*SPHTQQ
Trigger: TTGCTGTGTGTGCGGTGACCATTCCGTGGCTCTCCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGTGTCTCTGAGGCAATaGGAAGTACAGACTTCACAA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFVSLRQ*EVQTSQ
Trigger: TTGTGAAGTCTGTACTTCCCATTGCCTCAGAGACAC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATCTCCACTGTGCTCTTaGCTCTTCTCAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLISPLCS*LFSGPH
Trigger: GTGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGTTACCTGCACAGACTaGTCTCTCCAACAGGAAATT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFVTCTD*SLQQEI
Trigger: AATTTCCTGTTGGAGAGACCAGTCTGTGCAGGTAAC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGATGGGTGTTTCCAGTaGCATGCTCTTACAGACAGA +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSDGCFQ*HALTDR
Trigger: TCTGTCTGTAAGAGCATGCCACTGGAAACACCCATC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGGGTCCCAAATTGGATaGGTGTTTCCAGTGGCATGC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIGSQIG*VFPVAC
Trigger: GCATGCCACTGGAAACACCCATCCAATTTGGGACCC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAAAGATCCCATACTTTaGGCTCACCAGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFKDPIL*AHQLLI
Trigger: TATCAGTAGCTGGTGAGCTCAAAGTATGGGATCTTT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGATAGAGTAATGAAGTaGCACTTTGGTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSDRVMK*HFGGGL
Trigger: AAGGCCACCACCAAAGTGTCACTTCATTACTCTATC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCCACAAGATCACACATaGGTCCAGGTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIPQDHT*VQVPRQ
Trigger: TTGTCTGGGGACCTGGACTCATGTGTGATCTTGTGG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCACAAGATCACACATaGGTCCAGGTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPQDHT*VQVPRQ
Trigger: TTGTCTGGGGACCTGGACTCATGTGTGATCTTGTGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTCCCAGATATAAACTaGGTCATCTGCACATCCAAC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFFPDIN*VICTSN
Trigger: GTTGGATGTGCAGATGACTCAGTTTATATCTGGGAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGGCATCTACTTTTCTTaGTGGCTTAGGCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFGIYFS*WLRLHF
Trigger: AAAATGCAGCCTAAGCCATCAAGAAAAGTAGATGCC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTGCTGTGTCTATTGTaGGACTGGCATCTACTTTTC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLLCLL*DWHLLF
Trigger: GAAAAGTAGATGCCAGTCTCACAATAGACACAGCAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCACACTGGTTGACTATTaGCGGGTATCTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSTLVDY*RVSFPN
Trigger: GTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGACCTTTGCTATCCATaGATGATGCCTTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTDLCYP*MMPWLT
Trigger: GGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCAACAAGATCAACCTTaGGCTAAAGACATTAGCCTC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFQQDQP*AKDISL
Trigger: GAGGCTAATGTCTTTAGCTCAAGGTTGATCTTGTTG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAGAGTGCCACTGCCTaGAGGGAAGTCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQSATA*REVLIL
Trigger: CAAAATGAGGACTTCCCTGCAGGCAGTGGCACTCTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGACTACAGCAGTTCCTaGCCCATCTTTAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTDYSSS*PIFKPR
Trigger: TCTGGGCTTAAAGATGGGGCAGGAACTGCTGTAGTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCACCTTCCAGAAGTCTTaGTTTGGCAGCATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSTFQKS*FGSIQS
Trigger: GCTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACATGAAGACTCCACCTaGAGACCAGGGCAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTHEDST*RPGQGN
Trigger: ATTACCTTGCCCTGGTCTGCAGGTGGAGTCTTCATG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCAGCTTTGGCAGCATCTaGTTCATCTCACAGTTACCA +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSFGSI*FISQLP
Trigger: TGGTAACTGTGAGATGAAGCAGATGCTGCCAAAGCT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTFELLS*LTGLTG
Trigger: TCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCTCCCATTAGACACATaGTGTCTTCCAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTILPLDT*CLPGVP
Trigger: TGGGACCCCTGGAAGACAGCATGTGTCTAATGGGAG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGTCACAATCGTTCGCTaGTCATCAGTGATCATGATG +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSVTIVR*SSVIMM
Trigger: CATCATGATCACTGATGACCAGCGAACGATTGTGAC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACCAGGTGGCAGTTACTaGTATCTCTCTAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIPGGSY*YLSRRT
Trigger: GGTTCTCCTAGAGAGATACCAGTAACTGCCACCTGG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACCAGAAGTCTTGCTTTaGCAGCATTCAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIPEVLL*QHSKPG
Trigger: CCCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTCTCCACTGTGCTCTTaGCTCTTCTCAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTISPLCS*LFSGPH
Trigger: GTGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCTCCACTGTGCTCTTaGCTCTTCTCAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSPLCS*LFSGPH
Trigger: GTGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTAAATTTGTGTCTGTaGACTGGCATTCCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLNLCL*TGIPCW
Trigger: CCAACAGGGAATGCCAGTCCACAGACACAAATTTAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGGGTCCCAAATTGGATaGGTGTTTCCAGTGGCATGC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNGSQIG*VFPVAC
Trigger: GCATGCCACTGGAAACACCCATCCAATTTGGGACCC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGGGAAGTCCTCATTTTaGGCGAATCCTCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTGKSSF*ANPLEQ
Trigger: CTGCTCAAGAGGATTCGCCCAAAATGAGGACTTCCC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396328.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACAATGCACATGCAGTTaGTCCAGTCAGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIQCTCS*SSQETE
Trigger: CTCAGTTTCCTGACTGGATCAACTGCATGTGCATTG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACAATGCACATGCAGTTaGTCCAGTCAGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTQCTCS*SSQETE
Trigger: CTCAGTTTCCTGACTGGATCAACTGCATGTGCATTG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGAGCTCACCAGCTACTaGTACCACCAAGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIELTSY*YHQERI
Trigger: GATTCTCTCTTGGTGGTATCAGTAGCTGGTGAGCTC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAGCTCACCAGCTACTaGTACCACCAAGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNELTSY*YHQERI
Trigger: GATTCTCTCTTGGTGGTATCAGTAGCTGGTGAGCTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCACATCTTGCTTTTCCTaGATGCTGTTGATAGATGAG +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFTSCFS*MLLIDE
Trigger: CTCATCTATCAACAGCATTCAGGAAAAGCAAGATGT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGTGCTTAAGTGTCTCTaGGGCAATGGGAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIVLKCL*GNGKYR
Trigger: TCTGTACTTCCCATTGCCTCAGAGACACTTAAGCAC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGTGCTTAAGTGTCTCTaGGGCAATGGGAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTVLKCL*GNGKYR
Trigger: TCTGTACTTCCCATTGCCTCAGAGACACTTAAGCAC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAATCAGTAACCTTACATaGAGACTCCACCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIISNLT*RLHLQT
Trigger: GGTCTGCAGGTGGAGTCTTCATGTAAGGTTACTGAT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTEVCRV*VAVMLD
Trigger: GTCAAGCATGACAGCAACTCAAACTCGGCAAACTTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIEVCRV*VAVMLD
Trigger: GTCAAGCATGACAGCAACTCAAACTCGGCAAACTTC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATTTGCTATCCATGAATaGTGCCTTGGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIFAIHE*CLGSPG
Trigger: TCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGACCTTTGCTATCCATaGATGATGCCTTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIDLCYP*MMPWLT
Trigger: GGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGACCTTTGCTATCCATaGATGATGCCTTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDLCYP*MMPWLT
Trigger: GGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAGTACCAAGTGGTTATaGTCACCACGTACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSTKWL*SPRTWS
Trigger: AGACCACGTACGTGGTGATCATAACCACTTGGTACT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGAAGTCCCTTGCTCTTaGCAAACATGTTACCGAAGC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTEVPCS*QTCYRS
Trigger: GCTTCGGTAACATGTTTGGCAAGAGCAAGGGACTTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGTCTCTCAGTATATGTaGAAAATCGAATTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFVSQYM*KIELSG
Trigger: GCCAGACAATTCGATTTTGCACATATACTGAGAGAC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGACTACAGCAGTTCCTaGCCCATCTTTAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDYSSS*PIFKPR
Trigger: TCTGGGCTTAAAGATGGGGCAGGAACTGCTGTAGTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAAATTCTCAACCGGGTaGCATTTTATCATCCTCACA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFKFSTG*HFIILT
Trigger: TGTGAGGATGATAAAATGGCACCCGGTTGAGAATTT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCATGTCTTTCCAAAGTaGCTGTTTCAATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFHVFPK*LFQFPR
Trigger: TCTGGGAAATTGAAACAGGCACTTTGGAAAGACATG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCATGAAGACTCCACCTaGAGACCAGGGCAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNHEDST*RPGQGN
Trigger: ATTACCTTGCCCTGGTCTGCAGGTGGAGTCTTCATG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGAGAACAGCTTGTATTaGTTCAGTTACCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSENSLY*FSYLHR
Trigger: TCTGTGCAGGTAACTGAAGCAATACAAGCTGTTCTC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGGGCTGACTGGAGTTTaGAGAGGCAAAGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTGLTGV*RGKVFL
Trigger: TAGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFELLS*LTGLTG
Trigger: TCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACCATTTAAGACACCTTaGAGGGGCAGACCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTPFKTP*RGRPLL
Trigger: TAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATTGAGCAAACTACAGTaGGAGGTGATCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLSKLQ*EVIWGL
Trigger: TAGTCCCCAGATCACCTCGCACTGTAGTTTGCTCAA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCAGGTGGCAGTTACTaGTATCTCTCTAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPGGSY*YLSRRT
Trigger: GGTTCTCCTAGAGAGATACCAGTAACTGCCACCTGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACTTGAAGAGTCCAGGTaGCAGTTACTGGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLEESR*QLLVSL
Trigger: GAGAGATACCAGTAACTGCCACCTGGACTCTTCAAG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCCAGAAGTCTTGCTTTaGCAGCATTCAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIPEVLL*QHSKPG
Trigger: CCCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCAGAAGTCTTGCTTTaGCAGCATTCAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPEVLL*QHSKPG
Trigger: CCCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAAGCTGGTAGGGGCTaGAGGATCTCTGTTCTATAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQAGRG*RISVLY
Trigger: GTATAGAACAGAGATCCTCCAGCCCCTACCAGCTTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCAAGCTGGTAGGGGCTaGAGGATCTCTGTTCTATAC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIQAGRG*RISVLY
Trigger: GTATAGAACAGAGATCCTCCAGCCCCTACCAGCTTG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCAGCCTCAGGTACATaGGATTCATTCTTACCATTT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSASGT*DSFLPF
Trigger: AAATGGTAAGAATGAATCCCATGTACCTGAGGCTGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAATGTCCTCCACGTCTTaGAAGTTTGCCGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIMSSTS*KFAEFE
Trigger: CTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAATGTCCTCCACGTCTTaGAAGTTTGCCGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTMSSTS*KFAEFE
Trigger: CTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTTTGTGTCTGTGGACTaGCATTCCCTGTTGGAAATA +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSFVSVD*HSLLEI
Trigger: TATTTCCAACAGGGAATGCCAGTCCACAGACACAAA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAGTCAAGCTTCTTTCTaGGAAAAGACCTACAAGAGT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSQASF*EKTYKS
Trigger: ACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACAGTGCGAGGTGATCTaGGGACTATTGTACATGAAG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTQCEVI*GLLYMK
Trigger: CTTCATGTACAATAGTCCCCAGATCACCTCGCACTG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATGCACTGTCCATTGGTaGCATTCCAAACACACATCT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTCTVHW*HSKHTS
Trigger: AGATGTGTGTTTGGAATGTCACCAATGGACAGTGCA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATCCTGTCATCCGGAATaGGCAGTGGTAATAACAGAT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSCHPE*AVVITD
Trigger: ATCTGTTATTACCACTGCTCATTCCGGATGACAGGA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGATGATCTAAAACTGTaGACAACAGCCAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFDDLKL*TTAKVL
Trigger: CAAAACTTTGGCTGTTGTTCACAGTTTTAGATCATC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAATGCACATGCAGTTaGTCCAGTCAGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQCTCS*SSQETE
Trigger: CTCAGTTTCCTGACTGGATCAACTGCATGTGCATTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCAGATGAGGATTCTGTaGGCAGCAATCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIQMRIL*AAITSP
Trigger: TGGAGAAGTGATTGCTGCTCACAGAATCCTCATCTG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAGATGAGGATTCTGTaGGCAGCAATCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQMRIL*AAITSP
Trigger: TGGAGAAGTGATTGCTGCTCACAGAATCCTCATCTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGATAGAGTAATGAAGTaGCACTTTGGTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIDRVMK*HFGGGL
Trigger: AAGGCCACCACCAAAGTGTCACTTCATTACTCTATC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTGCTTAAGTGTCTCTaGGGCAATGGGAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVLKCL*GNGKYR
Trigger: TCTGTACTTCCCATTGCCTCAGAGACACTTAAGCAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATCAGTAACCTTACATaGAGACTCCACCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNISNLT*RLHLQT
Trigger: GGTCTGCAGGTGGAGTCTTCATGTAAGGTTACTGAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACTCACCACCATAGAATaGACTGGAAGAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLILTTIE*TGRVNI
Trigger: GATGTTGACTCTTCCAGTTCATTCTATGGTGGTGAG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACTCACCACCATAGAATaGACTGGAAGAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLTTIE*TGRVNI
Trigger: GATGTTGACTCTTCCAGTTCATTCTATGGTGGTGAG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAACACTGGTTGACTATTaGCGGGTATCTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLITLVDY*RVSFPN
Trigger: GTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGCCATGGACACTGGTTaGCTATTGACGGGTATCTTT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIAMDTG*LLTGIF
Trigger: AAAGATACCCGTCAATAGTCAACCAGTGTCCATGGC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGCCATGGACACTGGTTaGCTATTGACGGGTATCTTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNAMDTG*LLTGIF
Trigger: AAAGATACCCGTCAATAGTCAACCAGTGTCCATGGC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNEVCRV*VAVMLD
Trigger: GTCAAGCATGACAGCAACTCAAACTCGGCAAACTTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTTGCTATCCATGAATaGTGCCTTGGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIFAIHE*CLGSPG
Trigger: TCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTTGCTATCCATGAATaGTGCCTTGGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFAIHE*CLGSPG
Trigger: TCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGTACCAAGTGGTTATaGTCACCACGTACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSTKWL*SPRTWS
Trigger: AGACCACGTACGTGGTGATCATAACCACTTGGTACT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAAGTCCCTTGCTCTTaGCAAACATGTTACCGAAGC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNEVPCS*QTCYRS
Trigger: GCTTCGGTAACATGTTTGGCAAGAGCAAGGGACTTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAACCTTCCAGAAGTCTTaGTTTGGCAGCATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTTFQKS*FGSIQS
Trigger: GCTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCTTCTTCTCCACTGTaGTCTTGGCTCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSSSPL*SWLFSG
Trigger: TCCTGAGAAGAGCCAAGAGCACAGTGGAGAAGAAGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAACAGTTACCATTCTCTaGCATGGACACTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLITVTIL*HGHWLT
Trigger: AGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAGCTTTGGCAGCATCTaGTTCATCTCACAGTTACCA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLISFGSI*FISQLP
Trigger: TGGTAACTGTGAGATGAAGCAGATGCTGCCAAAGCT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGGGCTGACTGGAGTTTaGAGAGGCAAAGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIGLTGV*RGKVFL
Trigger: TAGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGGGCTGACTGGAGTTTaGAGAGGCAAAGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNGLTGV*RGKVFL
Trigger: TAGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCCATTTAAGACACCTTaGAGGGGCAGACCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIPFKTP*RGRPLL
Trigger: TAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCATTTAAGACACCTTaGAGGGGCAGACCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPFKTP*RGRPLL
Trigger: TAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAACTGTGTGGCAATTTaGTATTTCAAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFNCVAI*YFKSSH
Trigger: ATGAGAGGACTTGAAATAGCAAATTGCCACACAGTT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACTGAATGTTTTGTATaGCGCTCCCATCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTECFV*RSHLSP
Trigger: TGGGCTCAGATGGGAGCGGCATACAAAACATTCAGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559418.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACGGCTCTTATTTTCCTaGACAGAAGTAGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTRLLFS*TEVEHS
Trigger: ACTGTGCTCTACTTCTGTGCAGGAAAATAAGAGCCG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557913.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGTCACAATCGTTCGCTaGTCATCAGTGATCATGATG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIVTIVR*SSVIMM
Trigger: CATCATGATCACTGATGACCAGCGAACGATTGTGAC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTTGAAGAGTCCAGGTaGCAGTTACTGGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLEESR*QLLVSL
Trigger: GAGAGATACCAGTAACTGCCACCTGGACTCTTCAAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGTGTCTCTGAGGCAATaGGAAGTACAGACTTCACAA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTVSLRQ*EVQTSQ
Trigger: TTGTGAAGTCTGTACTTCCCATTGCCTCAGAGACAC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCCTGATTTGGAAGAGTaGCTGTGTATTTATCTGACA +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSPDLEE*LCIYLT
Trigger: TGTCAGATAAATACACAGCCACTCTTCCAAATCAGG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCAGCCTCAGGTACATaGGATTCATTCTTACCATTT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSASGT*DSFLPF
Trigger: AAATGGTAAGAATGAATCCCATGTACCTGAGGCTGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTCTGCCATGGACACTaGTTGACTATTGACGGGTAT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLCHGH*LTIDGY
Trigger: ATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTATGTCCTCCACGTCTTaGAAGTTTGCCGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIMSSTS*KFAEFE
Trigger: CTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATGTCCTCCACGTCTTaGAAGTTTGCCGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNMSSTS*KFAEFE
Trigger: CTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAGTGCGAGGTGATCTaGGGACTATTGTACATGAAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQCEVI*GLLYMK
Trigger: CTTCATGTACAATAGTCCCCAGATCACCTCGCACTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGATGGGTGTTTCCAGTaGCATGCTCTTACAGACAGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDGCFQ*HALTDR
Trigger: TCTGTCTGTAAGAGCATGCCACTGGAAACACCCATC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGTTACCGAAGCTGAATaGCCAAATAGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIVTEAE*PNRSSF
Trigger: GAAAGAACTCCTATTTGGTCATTCAGCTTCGGTAAC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTGCACTGTCCATTGGTaGCATTCCAAACACACATCT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTICTVHW*HSKHTS
Trigger: AGATGTGTGTTTGGAATGTCACCAATGGACAGTGCA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCCTGTCATCCGGAATaGGCAGTGGTAATAACAGAT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSCHPE*AVVITD
Trigger: ATCTGTTATTACCACTGCTCATTCCGGATGACAGGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGATGATCTAAAACTGTaGACAACAGCCAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSDDLKL*TTAKVL
Trigger: CAAAACTTTGGCTGTTGTTCACAGTTTTAGATCATC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAAAGATCCCATACTTTaGGCTCACCAGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTKDPIL*AHQLLI
Trigger: TATCAGTAGCTGGTGAGCTCAAAGTATGGGATCTTT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGGGTATATGCTTTTTaGAAGCCCACTGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRVYAF*KPTVQQ
Trigger: CTGCTGAACAGTGGGCTTTCAAAAAGCATATACCCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGATAGAGTAATGAAGTaGCACTTTGGTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDRVMK*HFGGGL
Trigger: AAGGCCACCACCAAAGTGTCACTTCATTACTCTATC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAAGAGTCAACATCACTaGGTGGAGTTGGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIKSQHH*VELVAK
Trigger: TTTTGCTACCAACTCCACTCAGTGATGTTGACTCTT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCTCACCACCATAGAATaGACTGGAAGAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTILTTIE*TGRVNI
Trigger: GATGTTGACTCTTCCAGTTCATTCTATGGTGGTGAG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTCACCACCATAGAATaGACTGGAAGAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLTTIE*TGRVNI
Trigger: GATGTTGACTCTTCCAGTTCATTCTATGGTGGTGAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCTCTTCATGTGTTGTTaGACTTCCGCCAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTILFMCC*TSAKRT
Trigger: TGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTCTTCATGTGTTGTTaGACTTCCGCCAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLFMCC*TSAKRT
Trigger: TGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACACTGGTTGACTATTaGCGGGTATCTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTLVDY*RVSFPN
Trigger: GTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACAACAAGATCAACCTTaGGCTAAAGACATTAGCCTC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTQQDQP*AKDISL
Trigger: GAGGCTAATGTCTTTAGCTCAAGGTTGATCTTGTTG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGGAGTCACACTCATTTaGCATCTTTATCCTGGTATG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIGVTLI*HLYPGM
Trigger: CATACCAGGATAAAGATGTCAAATGAGTGTGACTCC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGGAGAAAGACAATTTTaGGTTTCTGGGTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIGERQF*VSGCST
Trigger: GGTACTACACCCAGAAACTCAAAATTGTCTTTCTCC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACCATGCAGCTTTGTCTaGAAGATACCTACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTPCSFV*KIPTQV
Trigger: TACTTGAGTAGGTATCTTTCAGACAAAGCTGCATGG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGTGGTAATAACAGATTaGAGTGTGCCTGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTVVITD*SVPVRK
Trigger: CTTCCTTACAGGCACACTGCAATCTGTTATTACCAC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACCACCAGCAAAGAACTaGCCATTTCTACTAACTTCA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTPPAKN*PFLLTS
Trigger: TGAAGTTAGTAGAAATGGGCAGTTCTTTGCTGGTGG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACCACCAGCAAAGAACTaGCCATTTCTACTAACTTCA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIPPAKN*PFLLTS
Trigger: TGAAGTTAGTAGAAATGGGCAGTTCTTTGCTGGTGG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGGAACATCAGGGATGTaGCACAAAGTAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIGTSGM*HKVILP
Trigger: AGGAAGAATTACTTTGTGGCACATCCCTGATGTTCC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACCTTCCAGAAGTCTTaGTTTGGCAGCATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTFQKS*FGSIQS
Trigger: GCTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCATTAAGAATAATTCGTaGTCTTTCTCCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFIKNNS*SFSCLM
Trigger: CATGAGACAGGAGAAAGAGCACGAATTATTCTTAAT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATTGCTTCAGTTACCTaGACAGACTGGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNIASVT*TDWSLQ
Trigger: TTGGAGAGACCAGTCTGTGCAGGTAACTGAAGCAAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGAGAACAGCTTGTATTaGTTCAGTTACCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIENSLY*FSYLHR
Trigger: TCTGTGCAGGTAACTGAAGCAATACAAGCTGTTCTC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACAGTTACCATTCTCTaGCATGGACACTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTVTIL*HGHWLT
Trigger: AGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAGCTTTGGCAGCATCTaGTTCATCTCACAGTTACCA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTISFGSI*FISQLP
Trigger: TGGTAACTGTGAGATGAAGCAGATGCTGCCAAAGCT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGCTTTGGCAGCATCTaGTTCATCTCACAGTTACCA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSFGSI*FISQLP
Trigger: TGGTAACTGTGAGATGAAGCAGATGCTGCCAAAGCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGTTGACAACATTTCATaGTTAGGGATGAGATTTACT +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFVDNIS*LGMRFT
Trigger: AGTAAATCTCATCCCTAAGCATGAAATGTTGTCAAC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCAACTGTGTGGCAATTTaGTATTTCAAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSNCVAI*YFKSSH
Trigger: ATGAGAGGACTTGAAATAGCAAATTGCCACACAGTT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCAATTATTATAATGTaGCCTCTAAGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSIIIM*PLRMEE
Trigger: CTCTTCCATCCTTAGAGGGCACATTATAATAATTGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCGGCTCTTATTTTCCTaGACAGAAGTAGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRLLFS*TEVEHS
Trigger: ACTGTGCTCTACTTCTGTGCAGGAAAATAAGAGCCG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTCACAATCGTTCGCTaGTCATCAGTGATCATGATG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVTIVR*SSVIMM
Trigger: CATCATGATCACTGATGACCAGCGAACGATTGTGAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGAGAACCATCAAACTTaGATACAGGAACATCAGGGA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTENHQT*IQEHQG
Trigger: TCCCTGATGTTCCTGTATCCAAGTTTGATGGTTCTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGCAGCATTCAAAGCCTaGGTAATGATAATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIAAFKA*VMIIVP
Trigger: TGGGACAATTATCATTACCCAGGCTTTGAATGCTGC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTGTCTCTGAGGCAATaGGAAGTACAGACTTCACAA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVSLRQ*EVQTSQ
Trigger: TTGTGAAGTCTGTACTTCCCATTGCCTCAGAGACAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGACATTAAAAGGTCTTaGGCAAAATTTGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSDIKRS*AKFGIS
Trigger: ACTGATGCCAAATTTTGCCCAAGACCTTTTAATGTC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCAATTCCAACCTGATTTaGAAGAGTGGCTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSNSNLI*KSGCVF
Trigger: AAATACACAGCCACTCTTCCAAATCAGGTTGGAATT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTTACCTGCACAGACTaGTCTCTCCAACAGGAAATT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVTCTD*SLQQEI
Trigger: AATTTCCTGTTGGAGAGACCAGTCTGTGCAGGTAAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATTAAATTTGTGTCTGTaGACTGGCATTCCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLILNLCL*TGIPCW
Trigger: CCAACAGGGAATGCCAGTCCACAGACACAAATTTAA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCAACAGTACAAGGTTaGTCACTGTTATACTTTGTA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSTVQG*SLLYFV
Trigger: TACAAAGTATAACAGTGACCAACCTTGTACTGTTGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCAATTGAAGTGACTTaGACTTCCCTATTAGATACA +
Preference number: 4 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSIEVT*TSLLDT
Trigger: TGTATCTAATAGGGAAGTCCAAGTCACTTCAATTGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGGGAAGTCCTCATTTTaGGCGAATCCTGACATACAA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNGKSSF*ANPDIQ
Trigger: TTGTATGTCAGGATTCGCCCAAAATGAGGACTTCCC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTTACCGAAGCTGAATaGCCAAATAGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVTEAE*PNRSSF
Trigger: GAAAGAACTCCTATTTGGTCATTCAGCTTCGGTAAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGTTACCGAAGCTGAATaGCCAAATAGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIVTEAE*PNRSSF
Trigger: GAAAGAACTCCTATTTGGTCATTCAGCTTCGGTAAC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAAAGATCCCATACTTTaGGCTCACCAGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNKDPIL*AHQLLI
Trigger: TATCAGTAGCTGGTGAGCTCAAAGTATGGGATCTTT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAACATCTTGCTTTTCCTaGATGCTGTTGATAGATGAG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLITSCFS*MLLIDE
Trigger: CTCATCTATCAACAGCATTCAGGAAAAGCAAGATGT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTCCCAGATATAAACTaGGTCATCTGCACATCCAAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFPDIN*VICTSN
Trigger: GTTGGATGTGCAGATGACTCAGTTTATATCTGGGAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAAGAGTCAACATCACTaGGTGGAGTTGGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNKSQHH*VELVAK
Trigger: TTTTGCTACCAACTCCACTCAGTGATGTTGACTCTT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAAGAGTCAACATCACTaGGTGGAGTTGGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIKSQHH*VELVAK
Trigger: TTTTGCTACCAACTCCACTCAGTGATGTTGACTCTT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGGCATCTACTTTTCTTaGTGGCTTAGGCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIGIYFS*WLRLHF
Trigger: AAAATGCAGCCTAAGCCATCAAGAAAAGTAGATGCC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGGCATCTACTTTTCTTaGTGGCTTAGGCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNGIYFS*WLRLHF
Trigger: AAAATGCAGCCTAAGCCATCAAGAAAAGTAGATGCC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTGCTGTGTCTATTGTaGGACTGGCATCTACTTTTC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLLCLL*DWHLLF
Trigger: GAAAAGTAGATGCCAGTCTCACAATAGACACAGCAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGTATACTTTCCATTCTaGAAGAACTGCCAACTCTAC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTVYFPF*KNCQLY
Trigger: GTAGAGTTGGCAGTTCTTTCAGAATGGAAAGTATAC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGGAGAAAGACAATTTTaGGTTTCTGGGTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIGERQF*VSGCST
Trigger: GGTACTACACCCAGAAACTCAAAATTGTCTTTCTCC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCATGCAGCTTTGTCTaGAAGATACCTACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPCSFV*KIPTQV
Trigger: TACTTGAGTAGGTATCTTTCAGACAAAGCTGCATGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATTTTGGGCGAATCCTaGCATACAAAGAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNILGES*HTKKGR
Trigger: TCTTCCCTTCTTTGTATGTCAGGATTCGCCCAAAAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTGGTAATAACAGATTaGAGTGTGCCTGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVVITD*SVPVRK
Trigger: CTTCCTTACAGGCACACTGCAATCTGTTATTACCAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCCACCAGCAAAGAACTaGCCATTTCTACTAACTTCA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIPPAKN*PFLLTS
Trigger: TGAAGTTAGTAGAAATGGGCAGTTCTTTGCTGGTGG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCACCAGCAAAGAACTaGCCATTTCTACTAACTTCA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPPAKN*PFLLTS
Trigger: TGAAGTTAGTAGAAATGGGCAGTTCTTTGCTGGTGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGGAACATCAGGGATGTaGCACAAAGTAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNGTSGM*HKVILP
Trigger: AGGAAGAATTACTTTGTGGCACATCCCTGATGTTCC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAAATTCTCAACCGGGTaGCATTTTATCATCCTCACA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTKFSTG*HFIILT
Trigger: TGTGAGGATGATAAAATGGCACCCGGTTGAGAATTT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACATGTCTTTCCAAAGTaGCTGTTTCAATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTHVFPK*LFQFPR
Trigger: TCTGGGAAATTGAAACAGGCACTTTGGAAAGACATG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCAGACAGAAACAATTTTaGTGTGTCTATTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSRQKQF*CVYCET
Trigger: AGTCTCACAATAGACACAGCAAAATTGTTTCTGTCT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAGAACAGCTTGTATTaGTTCAGTTACCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNENSLY*FSYLHR
Trigger: TCTGTGCAGGTAACTGAAGCAATACAAGCTGTTCTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGATTCTAACATGCGATaGCGAAAAATCCTAACATTT +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSDSNMR*RKILTF
Trigger: AAATGTTAGGATTTTTCGGCATCGCATGTTAGAATC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACCAGGTACTTTTTCCTaGAATATACAATGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIPGTFS*NIQWSQ
Trigger: TTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCAATTATTATAATGTaGCCTCTAAGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSIIIM*PLRMEE
Trigger: CTCTTCCATCCTTAGAGGGCACATTATAATAATTGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGAGAACCATCAAACTTaGATACAGGAACATCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIENHQT*IQEHQG
Trigger: TCCCTGATGTTCCTGTATCCAAGTTTGATGGTTCTC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAGAACCATCAAACTTaGATACAGGAACATCAGGGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNENHQT*IQEHQG
Trigger: TCCCTGATGTTCCTGTATCCAAGTTTGATGGTTCTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGCAGCATTCAAAGCCTaGGTAATGATAATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNAAFKA*VMIIVP
Trigger: TGGGACAATTATCATTACCCAGGCTTTGAATGCTGC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGAAGTGACACTTTGGTaGTGGCCTTTAAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIEVTLW*WPLRTL
Trigger: TAAAGTTCTTAAAGGCCACCACCAAAGTGTCACTTC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGAAGTGACACTTTGGTaGTGGCCTTTAAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTEVTLW*WPLRTL
Trigger: TAAAGTTCTTAAAGGCCACCACCAAAGTGTCACTTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAATGAAGTGACACTTTaGTGGTGGCCTTTAAGAACT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLINEVTL*WWPLRT
Trigger: AGTTCTTAAAGGCCACCACCAAAGTGTCACTTCATT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAATGAAGTGACACTTTaGTGGTGGCCTTTAAGAACT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTNEVTL*WWPLRT
Trigger: AGTTCTTAAAGGCCACCACCAAAGTGTCACTTCATT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACCTGATTTGGAAGAGTaGCTGTGTATTTATCTGACA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTPDLEE*LCIYLT
Trigger: TGTCAGATAAATACACAGCCACTCTTCCAAATCAGG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTTGTGTCTGTGGACTaGCATTCCCTGTTGGAAATA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIFVSVD*HSLLEI
Trigger: TATTTCCAACAGGGAATGCCAGTCCACAGACACAAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAGTCAAGCTTCTTTCTaGGAAAAGACCTACAAGAGT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSQASF*EKTYKS
Trigger: ACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAAACACACTTGCGTATaGATATTAGGAGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTKHTCV*ILGEHC
Trigger: GCAATGCTCTCCTAATATCCATACGCAAGTGTGTTT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR TCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGATGATCTAAAACTGTaGACAACAGCCAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTDDLKL*TTAKVL
Trigger: CAAAACTTTGGCTGTTGTTCACAGTTTTAGATCATC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACATCTTGCTTTTCCTaGATGCTGTTGATAGATGAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTSCFS*MLLIDE
Trigger: CTCATCTATCAACAGCATTCAGGAAAAGCAAGATGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATTATCAAAATTATCTTaGAGAGTCCAGGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLILSKLS*RVQVAV
Trigger: AACTGCCACCTGGACTCTTCAAGATAATTTTGATAA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAGACTTCACAAGCTGTaGATCATCACAACAATTAAG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIRLHKL*IITTIK
Trigger: CTTAATTGTTGTGATGATTCACAGCTTGTGAAGTCT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATTTCTTCTGAGAATTTaGTGGTATTATCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIFLLRI*WYYLLG
Trigger: CCCAAGGAGATAATACCATCAAATTCTCAGAAGAAA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGTATACTTTCCATTCTaGAAGAACTGCCAACTCTAC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIVYFPF*KNCQLY
Trigger: GTAGAGTTGGCAGTTCTTTCAGAATGGAAAGTATAC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTATACTTTCCATTCTaGAAGAACTGCCAACTCTAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVYFPF*KNCQLY
Trigger: GTAGAGTTGGCAGTTCTTTCAGAATGGAAAGTATAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTTAGAGAAGTCCCTTaGTCTTGCCAAACATGTTAC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIFREVP*SCQTCY
Trigger: GTAACATGTTTGGCAAGAGCAAGGGACTTCTCTAAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTTAGAGAAGTCCCTTaGTCTTGCCAAACATGTTAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFREVP*SCQTCY
Trigger: GTAACATGTTTGGCAAGAGCAAGGGACTTCTCTAAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTCTCTCAGTATATGTaGAAAATCGAATTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVSQYM*KIELSG
Trigger: GCCAGACAATTCGATTTTGCACATATACTGAGAGAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGTCTCTCAGTATATGTaGAAAATCGAATTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIVSQYM*KIELSG
Trigger: GCCAGACAATTCGATTTTGCACATATACTGAGAGAC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAACACAGCAAATTATCTaGTCACCCCTTAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTTQQII*SPLSLN
Trigger: GTTTAAACTAAGGGGTGAGCAGATAATTTGCTGTGT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAACACAGCAAATTATCTaGTCACCCCTTAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLITQQII*SPLSLN
Trigger: GTTTAAACTAAGGGGTGAGCAGATAATTTGCTGTGT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAAATTCTCAACCGGGTaGCATTTTATCATCCTCACA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNKFSTG*HFIILT
Trigger: TGTGAGGATGATAAAATGGCACCCGGTTGAGAATTT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCATGTCTTTCCAAAGTaGCTGTTTCAATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIHVFPK*LFQFPR
Trigger: TCTGGGAAATTGAAACAGGCACTTTGGAAAGACATG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCATGTCTTTCCAAAGTaGCTGTTTCAATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNHVFPK*LFQFPR
Trigger: TCTGGGAAATTGAAACAGGCACTTTGGAAAGACATG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATGTTCTATACTTTTGTaGTTAAGTGTCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLICSILL*LSVSEA
Trigger: TGCCTCAGAGACACTTAAGCACAAAAGTATAGAACA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATTATCATTCCACTATTaGATAAATCCCAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLILSFHY*INPNLA
Trigger: TGCCAGGTTGGGATTTATGCAATAGTGGAATGATAA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATTATCATTCCACTATTaGATAAATCCCAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTLSFHY*INPNLA
Trigger: TGCCAGGTTGGGATTTATGCAATAGTGGAATGATAA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGGATCAATTGTGATATaGTGTAAGTTGATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIGSIVI*CKLIPL
Trigger: AAGGGGAATCAACTTACAGCATATCACAATTGATCC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATGTCATAAACACACTTaGGTATGGATATTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLICHKHT*VWILGE
Trigger: CTCTCCTAATATCCATACGCAAGTGTGTTTATGACA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATGTCATAAACACACTTaGGTATGGATATTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTCHKHT*VWILGE
Trigger: CTCTCCTAATATCCATACGCAAGTGTGTTTATGACA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAAGTGACACTTTGGTaGTGGCCTTTAAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNEVTLW*WPLRTL
Trigger: TAAAGTTCTTAAAGGCCACCACCAAAGTGTCACTTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAATGAAGTGACACTTTaGTGGTGGCCTTTAAGAACT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNNEVTL*WWPLRT
Trigger: AGTTCTTAAAGGCCACCACCAAAGTGTCACTTCATT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGACAACATCCAACTTTaGTCTAATTTCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTDNIQL*SNFEER
Trigger: TCTCTCTTCGAAATTAGACCAAAGTTGGATGTTGTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGACATTAAAAGGTCTTaGGCAAAATTTGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTDIKRS*AKFGIS
Trigger: ACTGATGCCAAATTTTGCCCAAGACCTTTTAATGTC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCCTGATTTGGAAGAGTaGCTGTGTATTTATCTGACA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIPDLEE*LCIYLT
Trigger: TGTCAGATAAATACACAGCCACTCTTCCAAATCAGG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCTGATTTGGAAGAGTaGCTGTGTATTTATCTGACA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPDLEE*LCIYLT
Trigger: TGTCAGATAAATACACAGCCACTCTTCCAAATCAGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAATTCCAACCTGATTTaGAAGAGTGGCTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTNSNLI*KSGCVF
Trigger: AAATACACAGCCACTCTTCCAAATCAGGTTGGAATT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAATTTTCCAATCCTCTTaGAATTCCAACCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTIFQSS*NSNLIW
Trigger: CCAAATCAGGTTGGAATTCCAAGAGGATTGGAAAAT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTCAGCCTCAGGTACATaGGATTCATTCTTACCATTT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTISASGT*DSFLPF
Trigger: AAATGGTAAGAATGAATCCCATGTACCTGAGGCTGA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCAGCCTCAGGTACATaGGATTCATTCTTACCATTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSASGT*DSFLPF
Trigger: AAATGGTAAGAATGAATCCCATGTACCTGAGGCTGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGTCAAGCTTCTTTCTaGGAAAAGACCTACAAGAGT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSQASF*EKTYKS
Trigger: ACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAAACACACTTGCGTATaGATATTAGGAGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNKHTCV*ILGEHC
Trigger: GCAATGCTCTCCTAATATCCATACGCAAGTGTGTTT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATCCTGCAATATACAATaGAGCCAATGTGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLISCNIQ*SQCETQ
Trigger: TTGAGTTTCACATTGGCTCCATTGTATATTGCAGGA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAGAATGTTTGATACCTaGGGCTACTTTTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTRMFDT*GYFLTV
Trigger: CACAGTTAAAAAGTAGCCCCAGGTATCAAACATTCT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGATGATCTAAAACTGTaGACAACAGCCAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDDLKL*TTAKVL
Trigger: CAAAACTTTGGCTGTTGTTCACAGTTTTAGATCATC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAATGCTGTTGATAGATaGGGAAAGATCCCATACTTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNNAVDR*GKIPYF
Trigger: AAAGTATGGGATCTTTCCTCATCTATCAACAGCATT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTATCAAAATTATCTTaGAGAGTCCAGGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLSKLS*RVQVAV
Trigger: AACTGCCACCTGGACTCTTCAAGATAATTTTGATAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTATCAAAATTATCTTaGAGAGTCCAGGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTILSKLS*RVQVAV
Trigger: AACTGCCACCTGGACTCTTCAAGATAATTTTGATAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGACTTCACAAGCTGTaGATCATCACAACAATTAAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRLHKL*IITTIK
Trigger: CTTAATTGTTGTGATGATTCACAGCTTGTGAAGTCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTTCTTCTGAGAATTTaGTGGTATTATCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIFLLRI*WYYLLG
Trigger: CCCAAGGAGATAATACCATCAAATTCTCAGAAGAAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTTCTTCTGAGAATTTaGTGGTATTATCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFLLRI*WYYLLG
Trigger: CCCAAGGAGATAATACCATCAAATTCTCAGAAGAAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR TCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGGGTATATGCTTTTTaGAAGCCCACTGAATGTTTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRVYAF*KPTECF
Trigger: AAAACATTCAGTGGGCTTTCAAAAAGCATATACCCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACACAGCAAATTATCTaGTCACCCCTTAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTQQII*SPLSLN
Trigger: GTTTAAACTAAGGGGTGAGCAGATAATTTGCTGTGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAATTAAGAATAATTCGTaGTCTTTCTCCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIIKNNS*SFSCLM
Trigger: CATGAGACAGGAGAAAGAGCACGAATTATTCTTAAT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTGTTCTATACTTTTGTaGTTAAGTGTCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTICSILL*LSVSEA
Trigger: TGCCTCAGAGACACTTAAGCACAAAAGTATAGAACA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTGTTCTATACTTTTGTaGTTAAGTGTCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNCSILL*LSVSEA
Trigger: TGCCTCAGAGACACTTAAGCACAAAAGTATAGAACA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAGACAGAAACAATTTTaGTGTGTCTATTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTRQKQF*CVYCET
Trigger: AGTCTCACAATAGACACAGCAAAATTGTTTCTGTCT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTATCATTCCACTATTaGATAAATCCCAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTILSFHY*INPNLA
Trigger: TGCCAGGTTGGGATTTATGCAATAGTGGAATGATAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTATCATTCCACTATTaGATAAATCCCAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLSFHY*INPNLA
Trigger: TGCCAGGTTGGGATTTATGCAATAGTGGAATGATAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGTTGACAACATTTCATaGTTAGGGATGAGATTTACT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTVDNIS*LGMRFT
Trigger: AGTAAATCTCATCCCTAAGCATGAAATGTTGTCAAC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGGATCAATTGTGATATaGTGTAAGTTGATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIGSIVI*CKLIPL
Trigger: AAGGGGAATCAACTTACAGCATATCACAATTGATCC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGATTCTAACATGCGATaGCGAAAAATCCTAACATTT +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTDSNMR*RKILTF
Trigger: AAATGTTAGGATTTTTCGGCATCGCATGTTAGAATC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTGTCATAAACACACTTaGGTATGGATATTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNCHKHT*VWILGE
Trigger: CTCTCCTAATATCCATACGCAAGTGTGTTTATGACA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTGTCATAAACACACTTaGGTATGGATATTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTICHKHT*VWILGE
Trigger: CTCTCCTAATATCCATACGCAAGTGTGTTTATGACA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAACTGTGTGGCAATTTaGTATTTCAAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTINCVAI*YFKSSH
Trigger: ATGAGAGGACTTGAAATAGCAAATTGCCACACAGTT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAACTGTGTGGCAATTTaGTATTTCAAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNNCVAI*YFKSSH
Trigger: ATGAGAGGACTTGAAATAGCAAATTGCCACACAGTT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGACAACATCCAACTTTaGTCTAATTTCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIDNIQL*SNFEER
Trigger: TCTCTCTTCGAAATTAGACCAAAGTTGGATGTTGTC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGACAACATCCAACTTTaGTCTAATTTCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDNIQL*SNFEER
Trigger: TCTCTCTTCGAAATTAGACCAAAGTTGGATGTTGTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGACATTAAAAGGTCTTaGGCAAAATTTGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDIKRS*AKFGIS
Trigger: ACTGATGCCAAATTTTGCCCAAGACCTTTTAATGTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAATTCCAACCTGATTTaGAAGAGTGGCTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNNSNLI*KSGCVF
Trigger: AAATACACAGCCACTCTTCCAAATCAGGTTGGAATT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTATTTTCCAATCCTCTTaGAATTCCAACCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIIFQSS*NSNLIW
Trigger: CCAAATCAGGTTGGAATTCCAAGAGGATTGGAAAAT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATTTTCCAATCCTCTTaGAATTCCAACCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNIFQSS*NSNLIW
Trigger: CCAAATCAGGTTGGAATTCCAAGAGGATTGGAAAAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CCA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAATGTCCTTGACAACTaGTATACAACAAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTNVLDN*YTTSKK
Trigger: TTTCTTGCTTGTTGTATACCAGTTGTCAAGGACATT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAATGTCCTTGACAACTaGTATACAACAAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLINVLDN*YTTSKK
Trigger: TTTCTTGCTTGTTGTATACCAGTTGTCAAGGACATT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAATCCAGTTAACTGTGTaGCAATTTGCTATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PASQASFWEKTYKSLYLIIQLTV*QFAISS
Trigger: ACTTGAAATAGCAAATTGCCACACAGTTAACTGGAT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCCTGCAATATACAATaGAGCCAATGTGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSCNIQ*SQCETQ
Trigger: TTGAGTTTCACATTGGCTCCATTGTATATTGCAGGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAGAATGTTTGATACCTaGGGCTACTTTTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTIRMFDT*GYFLTV
Trigger: CACAGTTAAAAAGTAGCCCCAGGTATCAAACATTCT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
3UTR CAA 72 bp TACACTTATTTGATATTGCCATCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCCTTGACAACTGGTATA +
Preference number: 4 (lower is better)
Translates to: YTYLILPSFKML*GVLIMSLTTGI
Trigger: TATACCAGTTGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAAATAAGTGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATTAAGAATAATTCGTaGTCTTTCTCCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNIKNNS*SFSCLM
Trigger: CATGAGACAGGAGAAAGAGCACGAATTATTCTTAAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGACAGAAACAATTTTaGTGTGTCTATTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRQKQF*CVYCET
Trigger: AGTCTCACAATAGACACAGCAAAATTGTTTCTGTCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTTGACAACATTTCATaGTTAGGGATGAGATTTACT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVDNIS*LGMRFT
Trigger: AGTAAATCTCATCCCTAAGCATGAAATGTTGTCAAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR GCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGATTCTAACATGCGATaGCGAAAAATCCTAACATTT +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNDSNMR*RKILTF
Trigger: AAATGTTAGGATTTTTCGGCATCGCATGTTAGAATC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCAACAGTACAAGGTTaGTCACTGTTATACTTTGTA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSTVQG*SLLYFV
Trigger: TACAAAGTATAACAGTGACCAACCTTGTACTGTTGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCAATTGAAGTGACTTaGACTTCCCTATTAGATACA +
Preference number: 4 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSIEVT*TSLLDT
Trigger: TGTATCTAATAGGGAAGTCCAAGTCACTTCAATTGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CCA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAATGTCCTTGACAACTaGTATACAACAAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: HTCVWILGEHCLNISKTINVLDN*YTTSKK
Trigger: TTTCTTGCTTGTTGTATACCAGTTGTCAAGGACATT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS CCA 90 bp CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGTGCGCACCGTGCATGAGCCGAAGCAGGGCGAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RVHLTRECQTVGAGQ*VCAPCMSRSRARHC
Trigger: GCAGTGCCTCGCCCTGCTTCGGCTCATGCACGGTGCGCACACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS GCA 90 bp ATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGAGCTGGCTCGGAGGGTCCTACGCCC +
Preference number: 5 (lower is better)
Translates to: MSSTSWKFAEFELLS*LTGLTGAGSEGPTP
Trigger: GGGCGTAGGACCCTCCGAGCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS TCA 90 bp ACAGCTCCGGTCTACAGCTCCCAGGGTGAGCGACGCAGAAGACGGTaGTTTCTGCATTTCCATCTGAGGGACCGGGTTCATCTCACTAGG +
Preference number: 5 (lower is better)
Translates to: TAPVYSSQGERRRRR*FLHFHLRDRVHLTR
Trigger: CCTAGTGAGATGAACCCGGTCCCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACCCTGGGAGCTGTAGACCGGAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS TCA 90 bp ACATCTGTCAGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGACCGGGCTGACTGGAGCTGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: TSVRHVLHVLEVCRV*VAVMLDRADWSWLG
Trigger: TCCGAGCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS GCA 90 bp ATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGAGCTGGAAAATCGGGTCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: MSSTSWKFAEFELLS*LTGLTGAGKSGHSH
Trigger: GTGGGAGTGACCCGATTTTCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567224.1
CDS TCA 90 bp AAAAGGTGCTTCCGGGCATGCAGGAGGCAACTCTTTCCCTCAAGGTaGAGGAGAGCCACGGAATGGTCACCGCACACACAGCAAATTATC +
Preference number: 5 (lower is better)
Translates to: KRCFRACRRQLFPSR*RRATEWSPHTQQII
Trigger: GATAATTTGCTGTGTGTGCGGTGACCATTCCGTGGCTCTCCTTCACCTTGAGGGAAAGAGTTGCCTCCTGCATGCCCGGAAGCACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS TCA 90 bp ACATCTGTCAGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGACCGGGCTGACTGGAGTTTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: TSVRHVLHVLEVCRV*VAVMLDRADWSLQR
Trigger: CCTCTGCAAACTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CCA 90 bp TCAGACTCTTCCAAGGCACATCTGTCAGGCATGTCCTCCACGTCTTaGAAGTTTGCCGAGTTTGAGTTGCTGTCATGCTTGACCGGGCTG +
Preference number: 5 (lower is better)
Translates to: SDSSKAHLSGMSSTS*KFAEFELLSCLTGL
Trigger: CAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAGATGTGCCTTGGAAGAGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000567224.1
ENST00000614174.4
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTCCAGGGGTCCCAAATaGGATGGGTGTTTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPSRGPK*DGCFQW
Trigger: CCACTGGAAACACCCATCCAATTTGGGACCCCTGGA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTCCAGGGGTCCCAAATaGGATGGGTGTTTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSRGPK*DGCFQW
Trigger: CCACTGGAAACACCCATCCAATTTGGGACCCCTGGA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS TCA 90 bp ACATCTGTCAGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGACCGGGCTGACTGGAGCTGGAAAATC +
Preference number: 5 (lower is better)
Translates to: TSVRHVLHVLEVCRV*VAVMLDRADWSWKI
Trigger: GATTTTCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567224.1
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTTTCTCCACTGTGCTCTaGGCTCTTCTCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPFSTVL*ALLRTS
Trigger: TGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGAA...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGTGATCTGGGGACTATaGTACATGAAGCCATGCAGC +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPVIWGL*YMKPCS
Trigger: GCTGCATGGCTTCATGTACAATAGTCCCCAGATCAC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTCTGTAGGCTCCTTCTaGAGCAAACTACAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSVGSF*SKLQCE
Trigger: CTCGCACTGTAGTTTGCTCAAGAAGGAGCCTACAGA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS GCA 90 bp ATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGAGTTTGCAGAGGCAAAGTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: MSSTSWKFAEFELLS*LTGLTGVCRGKVFL
Trigger: TAGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAGAAGTCCCTTGCTCTaGCCAAACATGTTACCGAAG +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPRSPLL*PNMLPK
Trigger: CTTCGGTAACATGTTTGGCAAGAGCAAGGGACTTCT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTCCATGCACTGTCCATaGGTGACATTCCAAACACAC +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSMHCP*VTFQTH
Trigger: GTGTGTTTGGAATGTCACCAATGGACAGTGCATGGA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCTTTCAGTAATAGGCTaGGCTAGTGCCTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPLSVIG*ASASAE
Trigger: TTCAGCAGAGGCACTAGCCAAGCCTATTACTGAAAG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATCAGGGTATATGCTTTTaGAAAGCCCACTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHQGICF*KAHCSA
Trigger: TGCTGAACAGTGGGCTTTCAAAAAGCATATACCCTG...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAGAGAACAGCTTGTATaGCTTCAGTTACCTGCACAG +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHREQLV*LQLPAQ
Trigger: CTGTGCAGGTAACTGAAGCAATACAAGCTGTTCTCT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCAAACTCTTCATGTGTaGTTGAACTTCCGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPQTLHV*LNFRQE
Trigger: CTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGCT +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFELLSC*TGLTGA
Trigger: AGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAGTGGTAATAACAGATaGCAGTGTGCCTGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHSGNNR*QCACKE
Trigger: TTCCTTACAGGCACACTGCAATCTGTTATTACCACT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS GCA 90 bp TTCCAGCTTTGGCAGCATCTGCTTCATCTCACAGTTACCATTCTCTaGCATGGACACTGGTTGACTATTGACGGGTATCTTTCCCAAACT +
Preference number: 5 (lower is better)
Translates to: FQLWQHLLHLTVTIL*HGHWLTIDGYLSQT
Trigger: AGTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGTGAGATGAAGCAGATGCTGCCAAAGCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS GCA 90 bp TGTCCAAATTCAGCTCCTACTGATGAGATTCCATTTAAGACACCTTaGAGGGGCAGACCTTTGCTATCCATGAATGATGCCTTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: CPNSAPTDEIPFKTP*RGRPLLSMNDALAH
Trigger: GTGAGCCAAGGCATCATTCATGGATAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGGAATCTCATCAGTAGGAGCTGAATTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000567224.1
ENST00000614174.4
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCAAGAGAGAATCTTCTaGAATTCTCATGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPQERIF*NSHGVN
Trigger: GTTCACTCCATGAGAATTCAAGAAGATTCTCTCTTG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCTTATCAAAATTATCTaGAAGAGTCCAGGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPLIKII*KSPGGS
Trigger: ACTGCCACCTGGACTCTTCAAGATAATTTTGATAAG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTCTCCACTGTGCTCTaGGCTCTTCTCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFFSTVL*ALLRTS
Trigger: TGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATTTTATCATTCCACTATaGCATAAATCCCAACCTGGC +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHFIIPL*HKSQPG
Trigger: GCCAGGTTGGGATTTATGCAATAGTGGAATGATAAA...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCGGGCTGACTGGAGTTaGCAGAGGCAAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFRADWS*QRQSVS
Trigger: AGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCCG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSELLSC*TGLTGV
Trigger: AACTCCAGTCAGCCCGGTCAAGCATGACAGCAACTC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGG +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFFAEFE*LSCLTG
Trigger: CCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTCCATGAATGATGCCTaGGCTCACCTGGACTCTCAG +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFSMNDA*AHLDSQ
Trigger: CTGAGAGTCCAGGTGAGCCAAGGCATCATTCATGGA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTCTCAACAGTACAAGGTaGGTCACTGTTATACTTTGT +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPLNSTR*VTVILC
Trigger: ACAAAGTATAACAGTGACCAACCTTGTACTGTTGAG...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCCAGGGGTCCCAAATaGGATGGGTGTTTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSRGPK*DGCFQW
Trigger: CCACTGGAAACACCCATCCAATTTGGGACCCCTGGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS TCA 90 bp TGTTCAGCAGCTGATAGATGTAACTGTGACCATCTTCTGTCCAGATaGGGATTCTGTGAGCAGCAATCACTTCTCCACCAGCAAAGAACT +
Preference number: 5 (lower is better)
Translates to: CSAADRCNCDHLLSR*GFCEQQSLLHQQRT
Trigger: AGTTCTTTGCTGGTGGAGAAGTGATTGCTGCTCACAGAATCCTCATCTGGACAGAAGATGGTCACAGTTACATCTATCAGCTGCTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGG +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSFAEFE*LSCLTG
Trigger: CCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCCACGTCTTGGAAGTTaGCCGAGTTTGAGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFPRLGS*PSLSCC
Trigger: ACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCCATGAATGATGCCTaGGCTCACCTGGACTCTCAG +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSMNDA*AHLDSQ
Trigger: CTGAGAGTCCAGGTGAGCCAAGGCATCATTCATGGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAAAGCAGTATTAAATTaGTGTCTGTGGACTGGCATT +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHKAVLN*CLWTGI
Trigger: AATGCCAGTCCACAGACACAAATTTAATACTGCTTT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAAAGCAGTATTAAATTaGTGTCTGTGGACTGGCATT +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPKAVLN*CLWTGI
Trigger: AATGCCAGTCCACAGACACAAATTTAATACTGCTTT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTAATGGAACTGGGTATTaGTTGACAACATTTCATGCT +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPNGTGY*LTTFHA
Trigger: AGCATGAAATGTTGTCAACAAATACCCAGTTCCATT...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAATGGAACTGGGTATTaGTTGACAACATTTCATGCT +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHNGTGY*LTTFHA
Trigger: AGCATGAAATGTTGTCAACAAATACCCAGTTCCATT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTCTTACAGACAGACCTGTCCTTATAATGTCCTaGACAACTGGTATACAACAA +
Preference number: 5 (lower is better)
Translates to: RGPKLDGCFQWHALTDRPVLIMS*TTGIQQ
Trigger: TTGTTGTATACCAGTTGTCAAGGACATTATAAGGAC...AGGTCTGTCTGTAAGAGCATGCCACTGGAAACACCCATCCAATTTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp AGACACATGCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATAACAGACTAGTGAATTaGTGTCATAAACACACTTGC +
Preference number: 5 (lower is better)
Translates to: RHMLSSRGPKLDGCFQWHNRLVN*CHKHTC
Trigger: GCAAGTGTGTTTATGACACAAATTCACTAGTCTGTT...ATGCCACTGGAAACACCCATCCAATTTGGGACCCCTGGAAGACAGCATGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAGGGAAGTCCTCATTTaGGGCGAATCCTGGGACCCG +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTREVLI*GESWDP
Trigger: CGGGTCCCAGGATTCGCCCAAAATGAGGACTTCCCT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557913.5
CDS TCA 90 bp TCATCTCACAGTTACCATTCTCTGCCATGGACACTGGTTGACTATTaGCGGGTATCTTTCCCAAACTCTTCATGTGTTGTTGAACTTCCG +
Preference number: 5 (lower is better)
Translates to: SSHSYHSLPWTLVDY*RVSFPNSSCVVELP
Trigger: CGGAAGTTCAACAACACATGAAGAGTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGTGAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCAGAAGTCCCTTGCTCTaGCCAAACATGTTACCGAAG +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFRSPLL*PNMLPK
Trigger: CTTCGGTAACATGTTTGGCAAGAGCAAGGGACTTCT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCTTTCAGTAATAGGCTaGGCTAGTGCCTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLSVIG*ASASAE
Trigger: TTCAGCAGAGGCACTAGCCAAGCCTATTACTGAAAG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCGCCAAGAGAACAGCTaGTATTGCTTCAGTTACCTG +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFRQENS*YCFSYL
Trigger: CAGGTAACTGAAGCAATACAAGCTGTTCTCTTGGCG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGTGATCTGGGGACTATaGTACATGAAGCCATGCAGC +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSVIWGL*YMKPCS
Trigger: GCTGCATGGCTTCATGTACAATAGTCCCCAGATCAC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS TCA 90 bp TCAGGACCTCACCACCATAGAATGAACTGGAAGAGTCAACATCACTaGGTGGAGTTGGTAGCAAAAGTTCAACAAGGTTTTCCAGATCAA +
Preference number: 5 (lower is better)
Translates to: SGPHHHRMNWKSQHH*VELVAKVQQGFPDQ
Trigger: TTGATCTGGAAAACCTTGTTGAACTTTTGCTACCAACTCCACTCAGTGATGTTGACTCTTCCAGTTCATTCTATGGTGGTGAGGTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS GCA 90 bp TCTCTAGGAGAACCATCAAACTTGGATACAGGAACATCAGGGATGTaGCACAAAGTAATTCTTCCTGAGACTTCTCCAGAGAAAAGTACC +
Preference number: 5 (lower is better)
Translates to: SLGEPSNLDTGTSGM*HKVILPETSPEKST
Trigger: GGTACTTTTCTCTGGAGAAGTCTCAGGAAGAATTACTTTGTGGCACATCCCTGATGTTCCTGTATCCAAGTTTGATGGTTCTCCTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS GCA 90 bp CATAGTTTTCATAGTCGCAAATGTAGAAAGAGGTCTAGACCTAGTTaGTCTTGTCTGAGCTCTGCTGTAGCTAGCTTAGTGGTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: HSFHSRKCRKRSRPS*SCLSSAVASLVVLE
Trigger: CTCTAAGACCACTAAGCTAGCTACAGCAGAGCTCAGACAAGAGCAACTAGGTCTAGACCTCTTTCTACATTTGCGACTATGAAAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396328.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCCATGCACTGTCCATaGGTGACATTCCAAACACAC +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSMHCP*VTFQTH
Trigger: GTGTGTTTGGAATGTCACCAATGGACAGTGCATGGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATTCTCCACTGTGCTCTaGGCTCTTCTCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTFSTVL*ALLRTS
Trigger: TGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGAA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCACTCTTCATGTGTTGTaGAACTTCCGCCAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFTLHVL*NFRQEN
Trigger: GTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCAAACTCTTCATGTGTaGTTGAACTTCCGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFQTLHV*LNFRQE
Trigger: CTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACGGGCTGACTGGAGTTaGCAGAGGCAAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIRADWS*QRQSVS
Trigger: AGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCCG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIELLSC*TGLTGV
Trigger: AACTCCAGTCAGCCCGGTCAAGCATGACAGCAACTC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNELLSC*TGLTGV
Trigger: AACTCCAGTCAGCCCGGTCAAGCATGACAGCAACTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGG +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIFAEFE*LSCLTG
Trigger: CCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGG +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTFAEFE*LSCLTG
Trigger: CCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATCCATGAATGATGCCTaGGCTCACCTGGACTCTCAG +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSMNDA*AHLDSQ
Trigger: CTGAGAGTCCAGGTGAGCCAAGGCATCATTCATGGA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCATGTGCAAAATCGAATaGTCTGGCAGTTCAAGGACT +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFMCKIE*SGSSRT
Trigger: AGTCCTTGAACTGCCAGACAATTCGATTTTGCACAT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCAGGGTATATGCTTTTaGAAAGCCCACTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSQGICF*KAHCSA
Trigger: TGCTGAACAGTGGGCTTTCAAAAAGCATATACCCTG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATCCAGAAGTCTTGCTTaGGCAGCATTCAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSRSLA*AAFKAW
Trigger: CCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGGA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATCCAGAAGTCTTGCTTaGGCAGCATTCAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLISRSLA*AAFKAW
Trigger: CCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGGA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTCTCCACTGTGCTCTaGGCTCTTCTCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFSTVL*ALLRTS
Trigger: TGAGGTCCTGAGAAGAGCCAAGAGCACAGTGGAGAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCGGGCTGACTGGAGTTaGCAGAGGCAAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRADWS*QRQSVS
Trigger: AGAAACACTTTGCCTCTGCAAACTCCAGTCAGCCCG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFAEFE*LSCLTG
Trigger: CCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCCATGAATGATGCCTaGGCTCACCTGGACTCTCAG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSMNDA*AHLDSQ
Trigger: CTGAGAGTCCAGGTGAGCCAAGGCATCATTCATGGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCGGGAGTCACACTCATTaGACATCTTTATCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFGSHTH*TSLSWY
Trigger: ATACCAGGATAAAGATGTCAAATGAGTGTGACTCCC...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGTGATCTGGGGACTATaGTACATGAAGCCATGCAGC +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIVIWGL*YMKPCS
Trigger: GCTGCATGGCTTCATGTACAATAGTCCCCAGATCAC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATTTGGGCGAATCCTCTaGAGCAGAGCCTTCTCCATA +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTFGRIL*SRAFSI
Trigger: TATGGAGAAGGCTCTGCTCAAGAGGATTCGCCCAAA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396328.5
CDS TCA 90 bp TTAGAGAAGTCCCTTGCTCTTGCCAAACATGTTACCGAAGCTGAATaGCCAAATAGGAGTTCTTTCGCTGAAATCTTTAGTTCATGTGAG +
Preference number: 5 (lower is better)
Translates to: LEKSLALAKHVTEAE*PNRSSFAEIFSSCE
Trigger: CTCACATGAACTAAAGATTTCAGCGAAAGAACTCCTATTTGGTCATTCAGCTTCGGTAACATGTTTGGCAAGAGCAAGGGACTTCTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS CCA 90 bp AAAGAACCACCTTCCAGAAGTCTTGCTTTGGCAGCATTCAAAGCCTaGGTAATGATAATTGTCCCATCTTCACAGCCACATATTAGTTTA +
Preference number: 5 (lower is better)
Translates to: KEPPSRSLALAAFKA*VMIIVPSSQPHISL
Trigger: TAAACTAATATGTGGCTGTGAAGATGGGACAATTATCATTACCCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGTGGTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCAAGAGAGAATCTTCTaGAATTCTCATGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFQERIF*NSHGVN
Trigger: GTTCACTCCATGAGAATTCAAGAAGATTCTCTCTTG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCTTATCAAAATTATCTaGAAGAGTCCAGGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLIKII*KSPGGS
Trigger: ACTGCCACCTGGACTCTTCAAGATAATTTTGATAAG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCCAGAAGTCTTGCTTaGGCAGCATTCAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSRSLA*AAFKAW
Trigger: CCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACACCTTCCAGAAGTCTaGCTTTGGCAGCATTCAAAG +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTHLPEV*LWQHSK
Trigger: CTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGTG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCAACGTTACTCCATTTaGTCTTCACAGGCAAGACAT +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSQRYSI*SSQARH
Trigger: ATGTCTTGCCTGTGAAGACAAAATGGAGTAACGTTG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACGCCAAGAGAACAGCTaGTATTGCTTCAGTTACCTG +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIRQENS*YCFSYL
Trigger: CAGGTAACTGAAGCAATACAAGCTGTTCTCTTGGCG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATATGCCATGGACACTGGTaGACTATTGACGGGTATCTT +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLICHGHW*TIDGYL
Trigger: AAGATACCCGTCAATAGTCAACCAGTGTCCATGGCA...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATGCCATGGACACTGGTaGACTATTGACGGGTATCTT +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTCHGHW*TIDGYL
Trigger: AAGATACCCGTCAATAGTCAACCAGTGTCCATGGCA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCCACGTCTTGGAAGTTaGCCGAGTTTGAGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIPRLGS*PSLSCC
Trigger: ACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCCACGTCTTGGAAGTTaGCCGAGTTTGAGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNPRLGS*PSLSCC
Trigger: ACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCCTCAACAGTACAAGGTaGGTCACTGTTATACTTTGT +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFLNSTR*VTVILC
Trigger: ACAAAGTATAACAGTGACCAACCTTGTACTGTTGAG...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCTGTAGGCTCCTTCTaGAGCAAACTACAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSVGSF*SKLQCE
Trigger: CTCGCACTGTAGTTTGCTCAAGAAGGAGCCTACAGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGAAGTCCCTTGCTCTaGCCAAACATGTTACCGAAG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRSPLL*PNMLPK
Trigger: CTTCGGTAACATGTTTGGCAAGAGCAAGGGACTTCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCACAACAGCCAAAGTTTaGGCATCAATTATAAGGACA +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFTTAKV*ASIIRT
Trigger: TGTCCTTATAATTGATGCCAAAACTTTGGCTGTTGT...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGAAAGATCCCATACTTaGAGCTCACCAGCTACTGAT +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIERSHT*SSPATD
Trigger: ATCAGTAGCTGGTGAGCTCAAAGTATGGGATCTTTC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACAGGGTATATGCTTTTaGAAAGCCCACTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTQGICF*KAHCSA
Trigger: TGCTGAACAGTGGGCTTTCAAAAAGCATATACCCTG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCACCTTCCAGAAGTCTaGCTTTGGCAGCATTCAAAG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNHLPEV*LWQHSK
Trigger: CTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCACCTTCCAGAAGTCTaGCTTTGGCAGCATTCAAAG +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIHLPEV*LWQHSK
Trigger: CTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGTG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAGTGACATCAAAAGACTaGTTACTGGACCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTVTSKD*LLDQLP
Trigger: TGGAAGCTGGTCCAGTAACAAGTCTTTTGATGTCAC...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTCTTTCAGTAATAGGCTaGGCTAGTGCCTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTILSVIG*ASASAE
Trigger: TTCAGCAGAGGCACTAGCCAAGCCTATTACTGAAAG...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTTTCAGTAATAGGCTaGGCTAGTGCCTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLSVIG*ASASAE
Trigger: TTCAGCAGAGGCACTAGCCAAGCCTATTACTGAAAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGATCACCACGTACGTGGTCTATCCAGTTAACTGTGTGGCAATTTGCTATTTCTATTTTCCAATCCTCTaGGAATTCCAACCTGATTTG +
Preference number: 5 (lower is better)
Translates to: MITTYVVYPVNCVAICYFYFPIL*EFQPDL
Trigger: CAAATCAGGTTGGAATTCCAAGAGGATTGGAAAATA...GAAATAGCAAATTGCCACACAGTTAACTGGATAGACCACGTACGTGGTGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAGAGAACAGCTTGTATaGCTTCAGTTACCTGCACAG +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIREQLV*LQLPAQ
Trigger: CTGTGCAGGTAACTGAAGCAATACAAGCTGTTCTCT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCGCCAAGAGAACAGCTaGTATTGCTTCAGTTACCTG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNRQENS*YCFSYL
Trigger: CAGGTAACTGAAGCAATACAAGCTGTTCTCTTGGCG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAACTCTTCATGTGTTGTaGAACTTCCGCCAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTTLHVL*NFRQEN
Trigger: GTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTGCCATGGACACTGGTaGACTATTGACGGGTATCTT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNCHGHW*TIDGYL
Trigger: AAGATACCCGTCAATAGTCAACCAGTGTCCATGGCA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCCTCAACAGTACAAGGTaGGTCACTGTTATACTTTGT +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSLNSTR*VTVILC
Trigger: ACAAAGTATAACAGTGACCAACCTTGTACTGTTGAG...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCC +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSSFKML*GVLIMS
Trigger: GGACATTATAAGGACTCCCAAAAGCATTTTGAAGGA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACAAGTGGTAATAACAGATaGCAGTGTGCCTGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSGNNR*QCACKE
Trigger: TTCCTTACAGGCACACTGCAATCTGTTATTACCACT...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCACAACAGCCAAAGTTTaGGCATCAATTATAAGGACA +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSTTAKV*ASIIRT
Trigger: TGTCCTTATAATTGATGCCAAAACTTTGGCTGTTGT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAAAGATCCCATACTTaGAGCTCACCAGCTACTGAT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNERSHT*SSPATD
Trigger: ATCAGTAGCTGGTGAGCTCAAAGTATGGGATCTTTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGAAAGATCCCATACTTaGAGCTCACCAGCTACTGAT +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIERSHT*SSPATD
Trigger: ATCAGTAGCTGGTGAGCTCAAAGTATGGGATCTTTC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGTGACATCAAAAGACTaGTTACTGGACCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIVTSKD*LLDQLP
Trigger: TGGAAGCTGGTCCAGTAACAAGTCTTTTGATGTCAC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTGACATCAAAAGACTaGTTACTGGACCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVTSKD*LLDQLP
Trigger: TGGAAGCTGGTCCAGTAACAAGTCTTTTGATGTCAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACACAACGTTACTCCATTTaGTCTTCACAGGCAAGACAT +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTQRYSI*SSQARH
Trigger: ATGTCTTGCCTGTGAAGACAAAATGGAGTAACGTTG...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAGAATTCCAACCTGATTaGGAAGAGTGGCTGTGTATT +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIEFQPD*EEWLCI
Trigger: AATACACAGCCACTCTTCCAAATCAGGTTGGAATTC...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCTATTTTCCAATCCTCTaGGAATTCCAACCTGATTTG +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSYFPIL*EFQPDL
Trigger: CAAATCAGGTTGGAATTCCAAGAGGATTGGAAAATA...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360509.10
ENST00000396328.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGAGAACAGCTTGTATaGCTTCAGTTACCTGCACAG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNREQLV*LQLPAQ
Trigger: CTGTGCAGGTAACTGAAGCAATACAAGCTGTTCTCT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTACTCTTCATGTGTTGTaGAACTTCCGCCAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTITLHVL*NFRQEN
Trigger: GTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACTCTTCATGTGTTGTaGAACTTCCGCCAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTLHVL*NFRQEN
Trigger: GTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAAACTCTTCATGTGTaGTTGAACTTCCGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQTLHV*LNFRQE
Trigger: CTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCGTCCTTATAATGTCCTaGACAACTGGTATACAACAA +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSVLIMS*TTGIQQ
Trigger: TTGTTGTATACCAGTTGTCAAGGACATTATAAGGAC...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTCCAGGTACTTTTTCCTGCAATATACAATGGAGCCAATGTGAAACTCAACAGCATAGTAACAGAATGTTaGATACCTGGGGCTACTTTT +
Preference number: 5 (lower is better)
Translates to: FQVLFPAIYNGANVKLNSIVTEC*IPGATF
Trigger: AAAAGTAGCCCCAGGTATCAAACATTCTGTTACTAT...GCTGTTGAGTTTCACATTGGCTCCATTGTATATTGCAGGAAAAAGTACCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATACACCAAGAGAGAATCTaGAATTCTCATGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIHQERI*NSHGVN
Trigger: GTTCACTCCATGAGAATTCAAGATTCTCTCTTGGTG...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557913.5
CDS TCA 90 bp CGCAAAGAATCACAATTATTTTCCAATCCTCTTGGAATTCCAACCTaGTTTGGAAGAGTGGCTGTGTATTTATCTGACAAGTCCAAAACT +
Preference number: 5 (lower is better)
Translates to: RKESQLFSNPLGIPT*FGRVAVYLSDKSKT
Trigger: AGTTTTGGACTTGTCAGATAAATACACAGCCACTCTTCCAAATCAGGTTGGAATTCCAAGAGGATTGGAAAATAATTGTGATTCTTTGCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAGTGGTAATAACAGATaGCAGTGTGCCTGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSGNNR*QCACKE
Trigger: TTCCTTACAGGCACACTGCAATCTGTTATTACCACT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATGTGCAAAATCGAATaGTCTGGCAGTTCAAGGACT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNMCKIE*SGSSRT
Trigger: AGTCCTTGAACTGCCAGACAATTCGATTTTGCACAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAACGTTACTCCATTTaGTCTTCACAGGCAAGACAT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQRYSI*SSQARH
Trigger: ATGTCTTGCCTGTGAAGACAAAATGGAGTAACGTTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGAATTCCAACCTGATTaGGAAGAGTGGCTGTGTATT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNEFQPD*EEWLCI
Trigger: AATACACAGCCACTCTTCCAAATCAGGTTGGAATTC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGAATTCCAACCTGATTaGGAAGAGTGGCTGTGTATT +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIEFQPD*EEWLCI
Trigger: AATACACAGCCACTCTTCCAAATCAGGTTGGAATTC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGGGAGTCACACTCATTaGACATCTTTATCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNGSHTH*TSLSWY
Trigger: ATACCAGGATAAAGATGTCAAATGAGTGTGACTCCC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTGGGAGTCACACTCATTaGACATCTTTATCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIGSHTH*TSLSWY
Trigger: ATACCAGGATAAAGATGTCAAATGAGTGTGACTCCC...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp TTGATATTGCCATCCTTCAAAATGCTTTTGGGAGTCCTTATAATGTCCTTGACATCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCC +
Preference number: 5 (lower is better)
Translates to: LILPSFKMLLGVLIMSLTSFKML*GVLIMS
Trigger: GGACATTATAAGGACTCCCAAAAGCATTTTGAAGGA...TGTCAAGGACATTATAAGGACTCCCAAAAGCATTTTGAAGGATGGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTAATAGTGCTCACATaGCTTTCTAGCACCTCTGGA +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLIVLT*LSSTSG
Trigger: TCCAGAGGTGCTAGAAAGCAATGTGAGCACTATTAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTAATAGTGCTCACATaGCTTTCTAGCACCTCTGGA +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTILIVLT*LSSTSG
Trigger: TCCAGAGGTGCTAGAAAGCAATGTGAGCACTATTAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS TCA 90 bp TCAATAATACTTTGTGACATAGTATCATGCTTATCAAAATTATCTTaGAGAGTCCAGGTGGCAGTTACTGGTATCTCTCTAGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: SIILCDIVSCLSKLS*RVQVAVTGISLGEP
Trigger: TGGTTCTCCTAGAGAGATACCAGTAACTGCCACCTGGACTCTTCAAGATAATTTTGATAAGCATGATACTATGTCACAAAGTATTATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCAAGAGAGAATCTTCTaGAATTCTCATGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNQERIF*NSHGVN
Trigger: GTTCACTCCATGAGAATTCAAGAAGATTCTCTCTTG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTTATCAAAATTATCTaGAAGAGTCCAGGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLIKII*KSPGGS
Trigger: ACTGCCACCTGGACTCTTCAAGATAATTTTGATAAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTTTATCATTCCACTATaGCATAAATCCCAACCTGGC +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNFIIPL*HKSQPG
Trigger: GCCAGGTTGGGATTTATGCAATAGTGGAATGATAAA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTTTATCATTCCACTATaGCATAAATCCCAACCTGGC +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTIFIIPL*HKSQPG
Trigger: GCCAGGTTGGGATTTATGCAATAGTGGAATGATAAA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCC +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNSFKML*GVLIMS
Trigger: GGACATTATAAGGACTCCCAAAAGCATTTTGAAGGA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTTCCTTCAAAATGCTTTaGGGAGTCCTTATAATGTCC +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTISFKML*GVLIMS
Trigger: GGACATTATAAGGACTCCCAAAAGCATTTTGAAGGA...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAAACAGACTAGTGAATTaGTGTCATAAACACACTTGC +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLINRLVN*CHKHTC
Trigger: GCAAGTGTGTTTATGACACAAATTCACTAGTCTGTT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CCTGCTAGTCAAGCTTCTTTCTGGGAAAAGACCTACAAGAGTTTATACTTAATAATAGTAACAGAATGTTaGATACCTGGGGCTACTTTT +
Preference number: 5 (lower is better)
Translates to: PASQASFWEKTYKSLYLIIVTEC*IPGATF
Trigger: AAAAGTAGCCCCAGGTATCAAACATTCTGTTACTAT...TATTAAGTATAAACTCTTGTAGGTCTTTTCCCAGAAAGAAGCTTGACTAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACACAACAGCCAAAGTTTaGGCATCAATTATAAGGACA +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNTTAKV*ASIIRT
Trigger: TGTCCTTATAATTGATGCCAAAACTTTGGCTGTTGT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACTATTTTCCAATCCTCTaGGAATTCCAACCTGATTTG +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNYFPIL*EFQPDL
Trigger: CAAATCAGGTTGGAATTCCAAGAGGATTGGAAAATA...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACCTACAGCCTAATAACTaGACCAATAACAACAATGCT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNLQPNN*TNNNNA
Trigger: AGCATTGTTGTTATTGGTCAAGTTATTAGGCTGTAG...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAAAGCAGTATTAAATTaGTGTCTGTGGACTGGCATT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNKAVLN*CLWTGI
Trigger: AATGCCAGTCCACAGACACAAATTTAATACTGCTTT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACAATGGAACTGGGTATTaGTTGACAACATTTCATGCT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNNGTGY*LTTFHA
Trigger: AGCATGAAATGTTGTCAACAAATACCCAGTTCCATT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACGTCCTTATAATGTCCTaGACAACTGGTATACAACAA +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNVLIMS*TTGIQQ
Trigger: TTGTTGTATACCAGTTGTCAAGGACATTATAAGGAC...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp CACACTTGCGTATGGATATTAGGAGAGCATTGCTTGAATATCTCTAAAACTATTAACAGACTAGTGAATTaGTGTCATAAACACACTTGC +
Preference number: 5 (lower is better)
Translates to: HTCVWILGEHCLNISKTINRLVN*CHKHTC
Trigger: GCAAGTGTGTTTATGACACAAATTCACTAGTCTGTT...AATAGTTTTAGAGATATTCAAGCAATGCTCTCCTAATATCCATACGCAAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000614174.4
CDS-3UTR CAA 90 bp ATGTTGGCTAAAGTATTAGCAAATCCACTACAGCCTAATAACTTGACCAATAACATAGTAACAGAATGTTaGATACCTGGGGCTACTTTT +
Preference number: 5 (lower is better)
Translates to: MLAKVLANPLQPNNLTNNIVTEC*IPGATF
Trigger: AAAAGTAGCCCCAGGTATCAAACATTCTGTTACTAT...GTTATTGGTCAAGTTATTAGGCTGTAGTGGATTTGCTAATACTTTAGCCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000614174.4
CDS CCA 72 bp CTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGTGCGCACCGTGCATGAGCCGAAGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: LTRECQTVGAGQ*VCAPCMSRSRA
Trigger: CGCCCTGCTTCGGCTCATGCACGGTGCGCACACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS GCA 72 bp TGCGCACCGTGCATGAGCCGAAGCAGGGCGAGGCACTaGCTCACTCGGGAAGCACAAGGGGTCAGGGAGTTC +
Preference number: 6 (lower is better)
Translates to: CAPCMSRSRARH*LTREAQGVREF
Trigger: GAACTCCCTGACCCCTTGTGCTTCCCGAGTGAGGCAGTGCCTCGCCCTGCTTCGGCTCATGCACGGTGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS CAA 90 bp TCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGCTGGCTCGGAGGGTCCTACGCCCACG +
Preference number: 6 (lower is better)
Translates to: SSTSWKFAEFELLSC*TGLTGAGSEGPTPT
Trigger: CGTGGGCGTAGGACCCTCCGAGCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS CAA 90 bp CTGTCAGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGGCTGACTGGAGCTGGCTCGGAGGGT +
Preference number: 6 (lower is better)
Translates to: LSGMSSTSWKFAEFE*LSCLTGLTGAGSEG
Trigger: ACCCTCCGAGCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS CAA 90 bp TCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGCTGGAAAATCGGGTCACTCCCACCCG +
Preference number: 6 (lower is better)
Translates to: SSTSWKFAEFELLSC*TGLTGAGKSGHSHP
Trigger: CGGGTGGGAGTGACCCGATTTTCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567224.1
CDS TCA 72 bp GGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTaGCAGACGGCACCTGGAAAAACGGCTCCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: GQGVPFLSQRKG*QTAPGKTAPSH
Trigger: GTGGGAGGGAGCCGTTTTTCCAGGTGCCGTCTGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS GCA 72 bp ACGTCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGAGCTGGCTCGGAGGGT +
Preference number: 6 (lower is better)
Translates to: TSWKFAEFELLS*LTGLTGAGSEG
Trigger: ACCCTCCGAGCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS CAA 72 bp TCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGCTGGCTCGGAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: SWKFAEFELLSC*TGLTGAGSEGP
Trigger: AGGACCCTCCGAGCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614174.4
CDS TCA 72 bp AGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGACCGGGCTGACTGGAGC +
Preference number: 6 (lower is better)
Translates to: RHVLHVLEVCRV*VAVMLDRADWS
Trigger: GCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567224.1
ENST00000614174.4
CDS TCA 72 bp ACTCGGGAAGCACAAGGGGTCAGGGAGTTCCCTTTCTaGGTCAAAGAAAGGGGTGACAGACGGCACCTGGAA +
Preference number: 6 (lower is better)
Translates to: TREAQGVREFPF*VKERGDRRHLE
Trigger: TTCCAGGTGCCGTCTGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGTGCTTCCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS CCA 72 bp CTTTCTGAGTCAAAGAAAGGGGTGACAGACGGCACCTaGAAAAACGGCTCCCTCCCACCCGAATACTGCGCT +
Preference number: 6 (lower is better)
Translates to: LSESKKGVTDGT*KNGSLPPEYCA
Trigger: AGCGCAGTATTCGGGTGGGAGGGAGCCGTTTTTCCAGGTGCCGTCTGTCACCCCTTTCTTTGACTCAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS CAA 90 bp CTGTCAGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGGCTGACTGGAGCTGGAAAATCGGGT +
Preference number: 6 (lower is better)
Translates to: LSGMSSTSWKFAEFE*LSCLTGLTGAGKSG
Trigger: ACCCGATTTTCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567224.1
CDS TCA 72 bp AGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTaGGTTGCTGTCATGCTTGACCGGGCTGACTGGAGT +
Preference number: 6 (lower is better)
Translates to: RHVLHVLEVCRV*VAVMLDRADWS
Trigger: ACTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS TCA 72 bp GACACCTTGCAGGGGCAGACCTTTGCTATCCATGAATaGTGCCTTGGCTCACCTGGACTCTCAGACTCTTCC +
Preference number: 6 (lower is better)
Translates to: DTLQGQTFAIHE*CLGSPGLSDSS
Trigger: GGAAGAGTCTGAGAGTCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTCTGCCCCTGCAAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000567224.1
ENST00000614174.4
CDS TCA 72 bp AGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTaGGGGACCGGGTTCATCTCACTAGGGAGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SDAEDGDFCISI*GTGFISLGSAR
Trigger: TCTGGCACTCCCTAGTGAGATGAACCCGGTCCCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS TCA 72 bp CTGAATAGGAACAGCTCCGGTCTACAGCTCCCAGGGTaGGCGACGCAGAAGACGGTGATTTCTGCATTTCCA +
Preference number: 6 (lower is better)
Translates to: LNRNSSGLQLPG*ATQKTVISAFP
Trigger: TGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACCCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567575.1
CDS CAA 90 bp CTGTCAGGCATGTCCTCCACGTCTTGGAAGTTTGCCGAGTTTGAGTaGCTGTCATGCTTGACCGGGCTGACTGGAGTTTGCAGAGGCAAA +
Preference number: 6 (lower is better)
Translates to: LSGMSSTSWKFAEFE*LSCLTGLTGVCRGK
Trigger: TTTGCCTCTGCAAACTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS GCA 72 bp ACGTCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATaGTTGACCGGGCTGACTGGAGCTGGAAAATCGGGT +
Preference number: 6 (lower is better)
Translates to: TSWKFAEFELLS*LTGLTGAGKSG
Trigger: ACCCGATTTTCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567224.1
CDS CAA 72 bp TCTTGGAAGTTTGCCGAGTTTGAGTTGCTGTCATGCTaGACCGGGCTGACTGGAGCTGGAAAATCGGGTCAC +
Preference number: 6 (lower is better)
Translates to: SWKFAEFELLSC*TGLTGAGKSGH
Trigger: GTGACCCGATTTTCCAGCTCCAGTCAGCCCGGTCAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567224.1
CDS CAA 90 bp GCCTTCTGTCCCCAGAGTGCCACTGCCTGCAGGGAAGTCCTCATTTaGGGCGAATCTGACTATATGTTAAGTTGTAGACACTGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AFCPQSATACREVLI*GESDYMLSCRHCAA
Trigger: AGCAGCACAGTGTCTACAACTTAACATATAGTCAGATTCGCCCAAAATGAGGACTTCCCTGCAGGCAGTGGCACTCTGGGGACAGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560036.1
CDS CCA 72 bp TCCAAGGCACATCTGTCAGGCATGTCCTCCACGTCTTaGAAGTTTGCCGAGTTTGAGTTGCTGTCATGCTTG +
Preference number: 6 (lower is better)
Translates to: SKAHLSGMSSTS*KFAEFELLSCL
Trigger: CAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACGTGGAGGACATGCCTGACAGATGTGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000567224.1
ENST00000614174.4
CDS CAA 72 bp GTATTATCTCCTTGGGCCAGGCTTTCAGTAATAGGCTaGGCTAGTGCCTCTGCTGAAAGAGGACCACAGGCA +
Preference number: 6 (lower is better)
Translates to: VLSPWARLSVIG*ASASAERGPQA
Trigger: TGCCTGTGGTCCTCTTTCAGCAGAGGCACTAGCCAAGCCTATTACTGAAAGCCTGGCCCAAGGAGATAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS CAA 72 bp GAGATTCCATTTAAGACACCTTGCAGGGGCAGACCTTaGCTATCCATGAATGATGCCTTGGCTCACCTGGAC +
Preference number: 6 (lower is better)
Translates to: EIPFKTPCRGRP*LSMNDALAHLD
Trigger: GTCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGGAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000567224.1
ENST00000614174.4
CDS CAA 72 bp CCCCAGAGTGCCACTGCCTGCAGGGAAGTCCTCATTTaGGGCGAATCTGACTATATGTTAAGTTGTAGACAC +
Preference number: 6 (lower is better)
Translates to: PQSATACREVLI*GESDYMLSCRH
Trigger: GTGTCTACAACTTAACATATAGTCAGATTCGCCCAAAATGAGGACTTCCCTGCAGGCAGTGGCACTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560036.1
CDS CAA 90 bp CCTACTGATGAGATTCCATTTAAGACACCTTGCAGGGGCAGACCTTaGCTATCCATGAATGATGCCTTGGCTCACCTGGACTCTCAGACT +
Preference number: 6 (lower is better)
Translates to: PTDEIPFKTPCRGRP*LSMNDALAHLDSQT
Trigger: AGTCTGAGAGTCCAGGTGAGCCAAGGCATCATTCATGGATAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGGAATCTCATCAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000567224.1
ENST00000614174.4
CDS TCA 72 bp ACAACAAAGAAGCCAGCCTTCTCCTGTCATCCGGAATaGGCAGTGGTAATAACAGATTGCAGTGTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: TTKKPAFSCHPE*AVVITDCSVPV
Trigger: TACAGGCACACTGCAATCTGTTATTACCACTGCTCATTCCGGATGACAGGAGAAGGCTGGCTTCTTTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS TCA 72 bp GCTGATAGATGTAACTGTGACCATCTTCTGTCCAGATaGGGATTCTGTGAGCAGCAATCACTTCTCCACCAG +
Preference number: 6 (lower is better)
Translates to: ADRCNCDHLLSR*GFCEQQSLLHQ
Trigger: CTGGTGGAGAAGTGATTGCTGCTCACAGAATCCTCATCTGGACAGAAGATGGTCACAGTTACATCTATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS GCA 72 bp TGGCAGCATCTGCTTCATCTCACAGTTACCATTCTCTaGCATGGACACTGGTTGACTATTGACGGGTATCTT +
Preference number: 6 (lower is better)
Translates to: WQHLLHLTVTIL*HGHWLTIDGYL
Trigger: AAGATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGTGAGATGAAGCAGATGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS GCA 72 bp TCAGCTCCTACTGATGAGATTCCATTTAAGACACCTTaGAGGGGCAGACCTTTGCTATCCATGAATGATGCC +
Preference number: 6 (lower is better)
Translates to: SAPTDEIPFKTP*RGRPLLSMNDA
Trigger: GGCATCATTCATGGATAGCAAAGGTCTGCCCCTGCAAGGTGTCTTAAATGGAATCTCATCAGTAGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000567224.1
ENST00000614174.4
CDS CAA 90 bp AATTTGATGGTATTATCTCCTTGGGCCAGGCTTTCAGTAATAGGCTaGGCTAGTGCCTCTGCTGAAAGAGGACCACAGGCAGTTTTACTT +
Preference number: 6 (lower is better)
Translates to: NLMVLSPWARLSVIG*ASASAERGPQAVLL
Trigger: AAGTAAAACTGCCTGTGGTCCTCTTTCAGCAGAGGCACTAGCCAAGCCTATTACTGAAAGCCTGGCCCAAGGAGATAATACCATCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS GCA 72 bp CATAGTCGCAAATGTAGAAAGAGGTCTAGACCTAGTTaGTCTTGTCTGAGCTCTGCTGTAGCTAGCTTAGTG +
Preference number: 6 (lower is better)
Translates to: HSRKCRKRSRPS*SCLSSAVASLV
Trigger: CACTAAGCTAGCTACAGCAGAGCTCAGACAAGAGCAACTAGGTCTAGACCTCTTTCTACATTTGCGACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396328.5
CDS CCA 72 bp CCTTCCAGAAGTCTTGCTTTGGCAGCATTCAAAGCCTaGGTAATGATAATTGTCCCATCTTCACAGCCACAT +
Preference number: 6 (lower is better)
Translates to: PSRSLALAAFKA*VMIIVPSSQPH
Trigger: ATGTGGCTGTGAAGATGGGACAATTATCATTACCCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS TCA 72 bp ATCTCACAGTTACCATTCTCTGCCATGGACACTGGTTaGCTATTGACGGGTATCTTTCCCAAACTCTTCATG +
Preference number: 6 (lower is better)
Translates to: ISQLPFSAMDTG*LLTGIFPKLFM
Trigger: CATGAAGAGTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CCA 72 bp CTTCATCTCACAGTTACCATTCTCTGCCATGGACACTaGTTGACTATTGACGGGTATCTTTCCCAAACTCTT +
Preference number: 6 (lower is better)
Translates to: LHLTVTILCHGH*LTIDGYLSQTL
Trigger: AAGAGTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGTGAGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 72 bp CATCTCACAGTTACCATTCTCTGCCATGGACACTGGTaGACTATTGACGGGTATCTTTCCCAAACTCTTCAT +
Preference number: 6 (lower is better)
Translates to: HLTVTILCHGHW*TIDGYLSQTLH
Trigger: ATGAAGAGTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAGAATGGTAACTGTGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 72 bp CACACTGTAACTCTAGTTCTTCTGTCCATTCCAGCTTaGGCAGCATCTGCTTCATCTCACAGTTACCATTCT +
Preference number: 6 (lower is better)
Translates to: HTVTLVLLSIPA*AASASSHSYHS
Trigger: AGAATGGTAACTGTGAGATGAAGCAGATGCTGCCAAAGCTGGAATGGACAGAAGAACTAGAGTTACAGTGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 90 bp GGGGGAGAATCTTTTACTAAAGAACCACCTTCCAGAAGTCTTGCTTaGGCAGCATTCAAAGCCTGGGTAATGATAATTGTCCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: GGESFTKEPPSRSLA*AAFKAWVMIIVPSS
Trigger: TGAAGATGGGACAATTATCATTACCCAGGCTTTGAATGCTGCCAAAGCAAGACTTCTGGAAGGTGGTTCTTTAGTAAAAGATTCTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS CAA 90 bp TGGTTGACTATTGACGGGTATCTTTCCCAAACTCTTCATGTGTTGTaGAACTTCCGCCAAGAGAACAGCTTGTATTGCTTCAGTTACCTG +
Preference number: 6 (lower is better)
Translates to: WLTIDGYLSQTLHVL*NFRQENSLYCFSYL
Trigger: CAGGTAACTGAAGCAATACAAGCTGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTGGGAAAGATACCCGTCAATAGTCAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 90 bp CACTGGTTGACTATTGACGGGTATCTTTCCCAAACTCTTCATGTGTaGTTGAACTTCCGCCAAGAGAACAGCTTGTATTGCTTCAGTTAC +
Preference number: 6 (lower is better)
Translates to: HWLTIDGYLSQTLHV*LNFRQENSLYCFSY
Trigger: GTAACTGAAGCAATACAAGCTGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTGGGAAAGATACCCGTCAATAGTCAACCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS TCA 72 bp AATTTCTTCAGTAAAGATATCCCACAAGATCACACATaGGTCCAGGTCCCCAGACAACATCCAACTTTGGTC +
Preference number: 6 (lower is better)
Translates to: NFFSKDIPQDHT*VQVPRQHPTLV
Trigger: GACCAAAGTTGGATGTTGTCTGGGGACCTGGACTCATGTGTGATCTTGTGGGATATCTTTACTGAAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS TCA 72 bp TTGACGGGTATCTTTCCCAAACTCTTCATGTGTTGTTaGACTTCCGCCAAGAGAACAGCTTGTATTGCTTCA +
Preference number: 6 (lower is better)
Translates to: LTGIFPKLFMCC*TSAKRTACIAS
Trigger: TGAAGCAATACAAGCTGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTGGGAAAGATACCCGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS TCA 72 bp AGTTACCATTCTCTGCCATGGACACTGGTTGACTATTaGCGGGTATCTTTCCCAAACTCTTCATGTGTTGTT +
Preference number: 6 (lower is better)
Translates to: SYHSLPWTLVDY*RVSFPNSSCVV
Trigger: AACAACACATGAAGAGTTTGGGAAAGATACCCGTCAATAGTCAACCAGTGTCCATGGCAGAGAATGGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 72 bp ATTGACGGGTATCTTTCCCAAACTCTTCATGTGTTGTaGAACTTCCGCCAAGAGAACAGCTTGTATTGCTTC +
Preference number: 6 (lower is better)
Translates to: IDGYLSQTLHVL*NFRQENSLYCF
Trigger: GAAGCAATACAAGCTGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTGGGAAAGATACCCGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 72 bp ACTATTGACGGGTATCTTTCCCAAACTCTTCATGTGTaGTTGAACTTCCGCCAAGAGAACAGCTTGTATTGC +
Preference number: 6 (lower is better)
Translates to: TIDGYLSQTLHV*LNFRQENSLYC
Trigger: GCAATACAAGCTGTTCTCTTGGCGGAAGTTCAACAACACATGAAGAGTTTGGGAAAGATACCCGTCAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 90 bp ACTGTGAACAACAGCCAAAGTTTTGGCATCAATTATAAGGACATCTaGATATTCTCCACAACAAAGAAGCCAGCCTTCTCCTGTCATCCG +
Preference number: 6 (lower is better)
Translates to: TVNNSQSFGINYKDI*IFSTTKKPAFSCHP
Trigger: CGGATGACAGGAGAAGGCTGGCTTCTTTGTTGTGGAGAATATCAAGATGTCCTTATAATTGATGCCAAAACTTTGGCTGTTGTTCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS TCA 72 bp TCCCTTGCTCTTGCCAAACATGTTACCGAAGCTGAATaGCCAAATAGGAGTTCTTTCGCTGAAATCTTTAGT +
Preference number: 6 (lower is better)
Translates to: SLALAKHVTEAE*PNRSSFAEIFS
Trigger: ACTAAAGATTTCAGCGAAAGAACTCCTATTTGGTCATTCAGCTTCGGTAACATGTTTGGCAAGAGCAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS TCA 72 bp ATAGACATCTTGCTTTTCCTGAATGCTGTTGATAGATaGGGAAAGATCCCATACTTTGAGCTCACCAGCTAC +
Preference number: 6 (lower is better)
Translates to: IDILLFLNAVDR*GKIPYFELTSY
Trigger: GTAGCTGGTGAGCTCAAAGTATGGGATCTTTCCTCATCTATCAACAGCATTCAGGAAAAGCAAGATGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS CCA 72 bp CTCTCGCAAAGAATCACAATTATTTTCCAATCCTCTTaGAATTCCAACCTGATTTGGAAGAGTGGCTGTGTA +
Preference number: 6 (lower is better)
Translates to: LSQRITIIFQSS*NSNLIWKSGCV
Trigger: TACACAGCCACTCTTCCAAATCAGGTTGGAATTCCAAGAGGATTGGAAAATAATTGTGATTCTTTGCGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS CAA 72 bp CCAATAGAAGTCTCTCAGTATATGTGCAAAATCGAATaGTCTGGCAGTTCAAGGACTCAAGAAACTTGGATT +
Preference number: 6 (lower is better)
Translates to: PIEVSQYMCKIE*SGSSRTQETWI
Trigger: AATCCAAGTTTCTTGAGTCCTTGAACTGCCAGACAATTCGATTTTGCACATATACTGAGAGACTTCTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS TCA 72 bp CTTTGTGACATAGTATCATGCTTATCAAAATTATCTTaGAGAGTCCAGGTGGCAGTTACTGGTATCTCTCTA +
Preference number: 6 (lower is better)
Translates to: LCDIVSCLSKLS*RVQVAVTGISL
Trigger: TAGAGAGATACCAGTAACTGCCACCTGGACTCTTCAAGATAATTTTGATAAGCATGATACTATGTCACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS CCA 72 bp AGAAGTCTCTCAGTATATGTGCAAAATCGAATTGTCTaGCAGTTCAAGGACTCAAGAAACTTGGATTCTTTT +
Preference number: 6 (lower is better)
Translates to: RSLSVYVQNRIV*QFKDSRNLDSF
Trigger: AAAAGAATCCAAGTTTCTTGAGTCCTTGAACTGCCAGACAATTCGATTTTGCACATATACTGAGAGACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
ENST00000560036.1
CDS CAA 72 bp AATTATTTTCCAATCCTCTTGGAATTCCAACCTGATTaGGAAGAGTGGCTGTGTATTTATCTGACAAGTCCA +
Preference number: 6 (lower is better)
Translates to: NYFPILLEFQPD*EEWLCIYLTSP
Trigger: TGGACTTGTCAGATAAATACACAGCCACTCTTCCAAATCAGGTTGGAATTCCAAGAGGATTGGAAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS GCA 72 bp AATTTACTCCTGAATAGTCTTTTATCATTCCACTATTaGATAAATCCCAACCTGGCAACATCAGTGAGAAAT +
Preference number: 6 (lower is better)
Translates to: NLLLNSLLSFHY*INPNLATSVRN
Trigger: ATTTCTCACTGATGTTGCCAGGTTGGGATTTATGCAATAGTGGAATGATAAAAGACTATTCAGGAGTAAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360509.10
ENST00000396328.5
ENST00000557913.5
ENST00000559418.5
CDS GCA 72 bp CGTTCACTGCTTCATGCGGTCCTCATAATATCAATATaGATTATTATCACTATTCCAAACATGAAGAAAATG +
Preference number: 6 (lower is better)
Translates to: RSLLHAVLIISI*IIITIPNMKKM
Trigger: CATTTTCTTCATGTTTGGAATAGTGATAATAATGCATATTGATATTATGAGGACCGCATGAAGCAGTGAACG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560036.1