RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR6 (Homo sapiens)

Ensembl gene IDs: ENSG00000178252

Ensembl transcript IDs: ENST00000395474.7, ENST00000415265.6, ENST00000419837.1, ENST00000420783.7, ENST00000429900.6, ENST00000438660.5, ENST00000452875.5, ENST00000462064.5, ENST00000471162.5, ENST00000473238.6, ENST00000488572.6, ENST00000489684.2, ENST00000491365.1, ENST00000492780.1, ENST00000608424.6, ENST00000610967.4, ENST00000615452.1, ENST00000627177.1

Found 1277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGCCTGCCTCTCATGGGCAGCTATGGCCCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATGGCTCCAC +
Preference number: 1 (lower is better)
Translates to: QACLSWAAMARIPRP*CPRKAWRISPSWLH
Trigger: GTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp GCCCTACCAAGTGCCACAGCCGAATGCCTGAGTCATCACCCCCAGTaGTCACCCAGGCCTGCCTCTCATGGGCAGCTATGGCCCGGATCC +
Preference number: 1 (lower is better)
Translates to: ALPSATAECLSHHPQ*SPRPASHGQLWPGS
Trigger: GGATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCACTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACTTGGTAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp CAATCCCCGGTACCCACGCCCTACCAAGTGCCACAGCCGAATGCCTaGGTCATCACCCCCAGTGATCACCCAGGCCTGCCTCTCATGGGC +
Preference number: 1 (lower is better)
Translates to: QSPVPTPYQVPQPNA*VITPSDHPGLPLMG
Trigger: GCCCATGAGAGGCAGGCCTGGGTGATCACTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACTTGGTAGGGCGTGGGTACCGGGGATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp ACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATA +
Preference number: 1 (lower is better)
Translates to: TCHTRALCPKQCPIF*TRPPGTRRSPTFQI
Trigger: TATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp TCTAGAAGCTTGACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGACCCCCAGGCACTCGCAGGTCGCCC +
Preference number: 1 (lower is better)
Translates to: SRSLTCHTRALCPKQ*PIFCTRPPGTRRSP
Trigger: GGGCGACCTGCGAGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp CACAGCCGAATGCCTGAGTCATCACCCCCAGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATGGCCCGGATCCCACGTCCCTGGTGT +
Preference number: 1 (lower is better)
Translates to: HSRMPESSPPVITQA*LSWAAMARIPRPWC
Trigger: ACACCAGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCACTGGGGGTGATGACTCAGGCATTCGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp TTGCGTTGCCGGTCCCAATACTCATCTAGCCGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGGCGGCTTGGGGTGCTGGGGTCCGGA +
Preference number: 1 (lower is better)
Translates to: LRCRSQYSSSRWDER*MTWQARRLGVLGSG
Trigger: TCCGGACCCCAGCACCCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp ATGCCTGAGTCATCACCCCCAGTGATCACCCAGGCCTGCCTCTCATaGGCAGCTATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAG +
Preference number: 1 (lower is better)
Translates to: MPESSPPVITQACLS*AAMARIPRPWCPRK
Trigger: CTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCACTGGGGGTGATGACTCAGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp CGGTCCCAATACTCATCTAGCCGGTGGGACGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGGGTGCTGGGGTCCGGAGTAACCATG +
Preference number: 1 (lower is better)
Translates to: RSQYSSSRWDERCMT*QARRLGVLGSGVTM
Trigger: CATGGTTACTCCGGACCCCAGCACCCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp CCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTaGCCACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGC +
Preference number: 1 (lower is better)
Translates to: PQQARRHGGIHLHCH*PRDGGPHGWARCAG
Trigger: GCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp CCATGCTCCCATCGGGCACTATACGGAGCCCAGCTAGCCAGTTCATaGCTCGACAGGACTTCTGCCTTAGGACTGGCTGGAGCTGGCCGT +
Preference number: 1 (lower is better)
Translates to: PCSHRALYGAQLASS*LDRTSALGLAGAGR
Trigger: ACGGCCAGCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGGCATGAACTGGCTAGCTGGGCTCCGTATAGTGCCCGATGGGAGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp AGGGTAATGGTGCCCACACGCTTTACACAAGTGATCTCACGGCCATaGAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCC +
Preference number: 1 (lower is better)
Translates to: RVMVPTRFTQVISRP*RPSRRITCGRVQPP
Trigger: GGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTGTGGGCACCATTACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp GCAGCTATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGGCTCCACACCAAGCAGACACAATCC +
Preference number: 1 (lower is better)
Translates to: AAMARIPRPWCPRKA*RISPSWLHTKQTQS
Trigger: GGATTGTGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp ATCCGATGCCGATTGCGTTGCCGGTCCCAATACTCATCTAGCCGGTaGGACGAAAGGTGCATGACATGGCAGGCGAGGCGGCTTGGGGTG +
Preference number: 1 (lower is better)
Translates to: IRCRLRCRSQYSSSR*DERCMTWQARRLGV
Trigger: CACCCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp TCAGTCAAGTCGGGCCCCTCACTGCCAGGCTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGTG +
Preference number: 1 (lower is better)
Translates to: SVKSGPSLPGSRSSG*MKLGTPYSGPRVMV
Trigger: CACCATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACTTGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp GCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTaGCACTGGCCACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGT +
Preference number: 1 (lower is better)
Translates to: ASPQQARRHGGIHLH*HWPRDGGPHGWARC
Trigger: ACACCTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp CAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAAGCAGAGAGCCGAGACCCCCAATCC +
Preference number: 1 (lower is better)
Translates to: QQSPRASQSHSLECT*PTTGLEAESRDPQS
Trigger: GGATTGGGGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp GCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCTCCCACAGCCTCTTCTAGCTGTAGC +
Preference number: 1 (lower is better)
Translates to: AACAQGTEYSSSTRS*GTSPASPTASSSCS
Trigger: GCTACAGCTAGAAGAGGCTGTGGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp CTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGG +
Preference number: 1 (lower is better)
Translates to: LDHTSLVRCSSACSF*ELCVRCSILAWLCW
Trigger: CCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR TCA 90 bp TGCCACTATGGTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTaGAGAGAGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGAT +
Preference number: 1 (lower is better)
Translates to: CHYGQLLPGVSNQAG*REGAPVCAGHLLQD
Trigger: ATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGACCATAGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp GCCATCTCTGCTTGCTTGGGGGCAGCAGGTACCGACAACGTTCCTTaGCAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGC +
Preference number: 1 (lower is better)
Translates to: AISACLGAAGTDNVP*QRWPCQRVRLRSLG
Trigger: GCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp TCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTA +
Preference number: 1 (lower is better)
Translates to: SAPSRRLQSGRLKRG*TCLCRAPLAGCTLL
Trigger: TAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp GCAAAGGCCATGGCCGCCTCAGTATCAGAGAATGCCCACGAACGGTaGCCTCCACCACAGTTGACGATGTGCAGCTTCTCGTGTGACCGA +
Preference number: 1 (lower is better)
Translates to: AKAMAASVSENAHER*PPPQLTMCSFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp GGGACATGTACCTGCAGAGACAACATGCAGCTGTCAGGTGGAGCCTaGAAGCCTGGGAGCATCTGCATGACCCATACCACACCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: GTCTCRDNMQLSGGA*KPGSICMTHTTPCP
Trigger: TGGGCAGGGTGTGGTATGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGGTACATGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CCA 90 bp AAGACATGGAGGGATCCATCTTCACTGCCACTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACAG +
Preference number: 1 (lower is better)
Translates to: KTWRDPSSLPLATRW*PSRVGKVCRLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCCTCCATGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp TCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGTGACTaGGGTCACACCCTGCTTCCCGTGCAGAGAGGGCAGGGTAGACAC +
Preference number: 1 (lower is better)
Translates to: SITPCGIHIATMACD*GHTLLPVQRGQGRH
Trigger: GTGTCTACCCTGCCCTCTCTGCACGGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp CCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATaGCTCCACACCAAGCAGACACAATCCTCTCCTGCACTGATAAGG +
Preference number: 1 (lower is better)
Translates to: PRPWCPRKAWRISPS*LHTKQTQSSPALIR
Trigger: CCTTATCAGTGCAGGAGAGGATTGTGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp TACCTGCAGAGACAACATGCAGCTGTCAGGTGGAGCCTGCAAGCCTaGGAGCATCTGCATGACCCATACCACACCCTGCCCAGGAGCATA +
Preference number: 1 (lower is better)
Translates to: YLQRQHAAVRWSLQA*EHLHDPYHTLPRSI
Trigger: TATGCTCCTGGGCAGGGTGTGGTATGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR TCA 90 bp CGAACGGTGCCCTCCACCACAGTTGACGATGTGCAGCTTCTCGTGTaGCCGAGGGTTCCACACCACAAACTCATTGGCATGGAAACCCAG +
Preference number: 1 (lower is better)
Translates to: RTVPSTTVDDVQLLV*PRVPHHKLIGMETQ
Trigger: CTGGGTTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp CCTCAGTATCAGAGAATGCCCACGAACGGTGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAA +
Preference number: 1 (lower is better)
Translates to: PQYQRMPTNGALHHS*RCAASRVTEGSTPQ
Trigger: TTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp AGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGTCTGTaGAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGTCATATA +
Preference number: 1 (lower is better)
Translates to: RRLQSGRLKRGCTCL*RAPLAGCTLLQGHI
Trigger: TATATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp CTTGACCTCGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTaGCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGT +
Preference number: 1 (lower is better)
Translates to: LDLDVIEIQGPCISH*QQSPRASQSHSLEC
Trigger: ACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp AGGAAGTCACCTGGGGGTAGGAAGGCACTGCATGTGTGCCATCTCTaGTTGCTTGGGGGCAGCAGGTACCGACAACGTTCCTTGACAAAG +
Preference number: 1 (lower is better)
Translates to: RKSPGGRKALHVCHL*LLGGSRYRQRSLTK
Trigger: CTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATGCAGTGCCTTCCTACCCCCAGGTGACTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp GACAACATGCAGCTGTCAGGTGGAGCCTGCAAGCCTGGGAGCATCTaGATGACCCATACCACACCCTGCCCAGGAGCATATATTACCTGG +
Preference number: 1 (lower is better)
Translates to: DNMQLSGGACKPGSI*MTHTTPCPGAYITW
Trigger: CCAGGTAATATATGCTCCTGGGCAGGGTGTGGTATGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR GCA 90 bp GCAAGGGACATGTACCTGGTCTCTGGGTCTACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCCCAATACTCATCTAGCCGGTGGGAC +
Preference number: 1 (lower is better)
Translates to: ARDMYLVSGSTLTIR*RLRCRSQYSSSRWD
Trigger: GTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTACATGTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR CCA 90 bp ACAGCAAGGGACATGTACCTGCAGAGACAACATGCAGCTGTCAGGTaGAGCCTGCAAGCCTGGGAGCATCTGCATGACCCATACCACACC +
Preference number: 1 (lower is better)
Translates to: TARDMYLQRQHAAVR*SLQAWEHLHDPYHT
Trigger: GGTGTGGTATGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGGTACATGTCCCTTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CCA 90 bp AGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGCTTATGGTGGAAGGTTTCAGCAAGG +
Preference number: 1 (lower is better)
Translates to: RRSLRLWLGASCVKE*TLRTHRLWWKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAGGCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp GTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTT +
Preference number: 1 (lower is better)
Translates to: VRCSILAWLCWVSLH*ATFKATEAPIPGNV
Trigger: AACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR GCA 90 bp TCAGAGAATGCCCACGAACGGTGCCCTCCACCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTG +
Preference number: 1 (lower is better)
Translates to: SENAHERCPPPQLTM*SFSCDRGFHTTNSL
Trigger: CAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp ATCCTTGAGGTAAGCAAAGGCCATGGCCGCCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCCACCACAGTTGACGATGTGCAGCTT +
Preference number: 1 (lower is better)
Translates to: ILEVSKGHGRLSIRE*PRTVPSTTVDDVQL
Trigger: AAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACCTCAAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp TACCTGGTCTCTGGGTCTACCTTAACCATCCGATGCCGATTGCGTTaGCGGTCCCAATACTCATCTAGCCGGTGGGACGAAAGGTGCATG +
Preference number: 1 (lower is better)
Translates to: YLVSGSTLTIRCRLR*RSQYSSSRWDERCM
Trigger: CATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp CAGTCAGACATGTTCCACAGGCCAGAGCGCCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTT +
Preference number: 1 (lower is better)
Translates to: QSDMFHRPERQSSQK*PCPQLIFTTRSPLL
Trigger: AAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTGGCGCTCTGGCCTGTGGAACATGTCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp TGCAGGATGCACCCTACTACAGGGTCATATAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATATTTCCCTCAAGCCAGCGTGCATCC +
Preference number: 1 (lower is better)
Translates to: CRMHPTTGSYSTTEL*PRAKAIFPSSQRAS
Trigger: GGATGCACGCTGGCTTGAGGGAAATATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCTATATGACCCTGTAGTAGGGTGCATCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp TGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTATGGTCAGCTCCTTCCAGGCGTCTC +
Preference number: 1 (lower is better)
Translates to: CCLLRQLLGTRPRAG*KQHLPLWSAPSRRL
Trigger: GAGACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp GGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCCACTATGGTCAGCTCCTTCCAGGCG +
Preference number: 1 (lower is better)
Translates to: GLLSAKAVAGYQTKS*LETAPATMVSSFQA
Trigger: CGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp GCTGAGACCATGATGCTTGGGCTTAGGATCTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGC +
Preference number: 1 (lower is better)
Translates to: AETMMLGLRILRPVT*AACAQGTEYSSSTR
Trigger: GCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAGCATCATGGTCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp ATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACCATGATGCTTGGGCTTAGGATCTTG +
Preference number: 1 (lower is better)
Translates to: MKVGSPCPRRQKVSR*SMEAETMMLGLRIL
Trigger: CAAGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp AGTCCATGTCAGCCACATCAGGCACATGGAACACAGTGCTATTCATaGAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTT +
Preference number: 1 (lower is better)
Translates to: SPCQPHQAHGTQCYS*RWVHHAPDARRSAV
Trigger: AACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCACTGTGTTCCATGTGCCTGATGTGGCTGACATGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp AAACACAGCCACCATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATGGATAAGATAGTGGCCAAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: KHSHHGLQVKVSIRL*PYPEAMDKIVAKQV
Trigger: AACCTGCTTGGCCACTATCTTATCCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp AGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATaGAAACCCAGGATAACCATGCTCCCATCGGGCACTATACGGAGC +
Preference number: 1 (lower is better)
Translates to: SFSCDRGFHTTNSLA*KPRITMLPSGTIRS
Trigger: GCTCCGTATAGTGCCCGATGGGAGCATGGTTATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp GCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGCTGCAGAATCCGCCCAGAATCCTGC +
Preference number: 1 (lower is better)
Translates to: ASCVKEWTLRTHRLW*KVSARSCRIRPESC
Trigger: GCAGGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp AGGAGCATATATTACCTGGTCTCTGGGTCTACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCCCAATACTCATCTAGCCGGTGGGAC +
Preference number: 1 (lower is better)
Translates to: RSIYYLVSGSTLTIR*RLRCRSQYSSSRWD
Trigger: GTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTAATATATGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CCA 90 bp ACAGCACGTACCGAGGAGATATGGTTACAAACAGCTGTGAGTGCGTaGGCTGAGCCTGTGGTTGTAGGGAGTGCTAGGACACAGACAGTA +
Preference number: 1 (lower is better)
Translates to: TARTEEIWLQTAVSA*AEPVVVGSARTQTV
Trigger: TACTGTCTGTGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACCATATCTCCTCGGTACGTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp ACCTTGAGGACACATCGCTTATGGTGGAAGGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCCTGCAAAAGAAAGAGCCTTACGGCC +
Preference number: 1 (lower is better)
Translates to: TLRTHRLWWKVSARS*RIRPESCKRKSLTA
Trigger: GGCCGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCTCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 90 bp AGTAGGACTGGAAATGTTTATCCTCTAGCAGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTG +
Preference number: 1 (lower is better)
Translates to: SRTGNVYPLAAAPST*PRRHRDTGPLYQSL
Trigger: CAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAAACATTTCCAGTCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 90 bp AATCCCTTGCTTTCCAGGTATGACATGCTGAAGATGATGCCCACATaGCCACTGATTCGTCGGTCAGGTGCTACAGGTTTGTTGTCTGCT +
Preference number: 1 (lower is better)
Translates to: NPLLSRYDMLKMMPT*PLIRRSGATGLLSA
Trigger: AGCAGACAACAAACCTGTAGCACCTGACCGACGAATCAGTGGGCATGTGGGCATCATCTTCAGCATGTCATACCTGGAAAGCAAGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAA +
Preference number: 1 (lower is better)
Translates to: FVTKFCLVMGSRAYS*QHSTHLQLLHRHQE
Trigger: TTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR CCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTaGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTAC +
Preference number: 1 (lower is better)
Translates to: RWASDSVSVSRYASS*YSSAWISAPTTTGY
Trigger: GTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR CCA 90 bp TACACTCTATTCTTTATTCTGGCCTGGGGCACAAGAGCAAAGAGATaGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: YTLFFILAWGTRAKR*ASDSVSVSRYASSW
Trigger: CCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTTTGCTCTTGTGCCCCAGGCCAGAATAAAGAATAGAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
3UTR CCA 90 bp GCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGC +
Preference number: 1 (lower is better)
Translates to: AKINWYCLLQSSVLS*GVGHILGSTPLTFS
Trigger: GCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCACTACCCACTACAGGTaGCCCAGCACCAGCCCGAGC +
Preference number: 2 (lower is better)
Translates to: VGLESQGGGAKPVGKPRITTHYR*PSTSPS
Trigger: GCTCGGGCTGGTGCTGGGGCACCTGTAGTGGGTAGT...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCAGTCGGGCCCCTCACTaGCAGGCTCCAGGTCATCAG +
Preference number: 2 (lower is better)
Translates to: VGLESQGGGAKPVGKPRISRAPH*QAPGHQ
Trigger: CTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACT...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCTGTGAGTGCGTGGGCTaGGCCTGTGGTTGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: VGLESQGGGAKPVGKPRICECVG*ACGCRE
Trigger: CTCCCTACAACCACAGGCTCAGCCCACGCACTCACA...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: VGLESQGGGAKPVGKPRIPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACATGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTAGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGT +
Preference number: 2 (lower is better)
Translates to: QTLPENHVWPGAATQSPVALHHS*RCAASR
Trigger: ACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGC...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACT +
Preference number: 2 (lower is better)
Translates to: ESGRGCQAGREAQDPLEAQCPIF*TRPPGT
Trigger: AGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTG...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTAGTGCCACAGCCGAATaGCTGAGTCATCACCCCCAG +
Preference number: 2 (lower is better)
Translates to: ESGRGCQAGREAQDPLEASATAE*LSHHPQ
Trigger: CTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACT...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: VGLESQGGGAKPVGKPRILSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTTCTCATGGGCAGCTATaGCCCGGATCCCACGTCCCT +
Preference number: 2 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVSHGQL*PGSHVP
Trigger: AGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGA...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTAAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 2 (lower is better)
Translates to: QTLPENHVWPGAATQSPVRTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp CCAGCCAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTaGAAGCAGAGAGCCGAGACCCCCAATCCCCGGTACCCACGCCCT +
Preference number: 2 (lower is better)
Translates to: PARVTALSVPGLLRD*KQRAETPNPRYPRP
Trigger: AGGGCGTGGGTACCGGGGATTGGGGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACTCCAATCAGGCAGGCTaGAGAGAGGGTGCACCTGTC +
Preference number: 2 (lower is better)
Translates to: AAEISRQATTPPGPDASNSNQAG*REGAPV
Trigger: GACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGA...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTAGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGAT +
Preference number: 2 (lower is better)
Translates to: QTLPENHVWPGAATQSPVAAPST*PRRHRD
Trigger: ATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGC...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp TCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGTGCCCCCACCCCAGGGTCCTTaGGCAGACCTGGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SGCMKLGTPYSGPRVMVPPPQGP*ADLVWR
Trigger: CCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGG...GGGCACCATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp CCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGCATGACGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGT +
Preference number: 2 (lower is better)
Translates to: PENHVWPGAATQSPVQHDALHHS*RCAASR
Trigger: ACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGC...GTCATGCTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTAGTGCAGGGCACCTCTTaGAGGATGCACCCTACTACA +
Preference number: 2 (lower is better)
Translates to: QTLPENHVWPGAATQSPVVQGTS*RMHPTT
Trigger: TGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCAC...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACT +
Preference number: 2 (lower is better)
Translates to: AAEISRQATTPPGPDASNQCPIF*TRPPGT
Trigger: AGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTG...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGA +
Preference number: 2 (lower is better)
Translates to: VGLESQGGGAKPVGKPRILCPKQ*PIFCTR
Trigger: TCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAG...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACTCTAGAAGCTTGACCTaGCACACACGGGCGCTGTGC +
Preference number: 2 (lower is better)
Translates to: AAEISRQATTPPGPDASNSRSLT*HTRALC
Trigger: GCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGA...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTCCTGCAGAGACAACATaGAGCTGTCAGGTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: ESGRGCQAGREAQDPLEAPAETT*SCQVEP
Trigger: AGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGG...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CCA 90 bp ATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCTCACCTGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATG +
Preference number: 2 (lower is better)
Translates to: MARIPRPWCPRKAWRISPVSIRL*PYPEAM
Trigger: CATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGAC...AGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGCATGACCAGCACCTGCCACTATaGTCAGCTCCTTCCAGGCGT +
Preference number: 2 (lower is better)
Translates to: PENHVWPGAATQSPVQHDQHLPL*SAPSRR
Trigger: ACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTG...GTCATGCTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CCCGCCAGGGCCCGATGCCAGCAACAGGAGCTCCTCATAACCACGCAGGGCCCATACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCC +
Preference number: 2 (lower is better)
Translates to: PARARCQQQELLITTQGPYQTKS*LETAPA
Trigger: GGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTA...TGGGCCCTGCGTGGTTATGAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp GCAGCTATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCC +
Preference number: 2 (lower is better)
Translates to: AAMARIPRPWCPRKAWRINASVF*SCSQQS
Trigger: GGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTT...GATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp ACAGGAGCTCCTCATAACCACGCAGGGCCCAGCTCAAGCTGTGCACCTTCCCAGGCCTACTACGGGACTTaGAGCAGAGAGCCGAGACCC +
Preference number: 2 (lower is better)
Translates to: TGAPHNHAGPSSSCAPSQAYYGT*SREPRP
Trigger: GGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGC...CTGGGAAGGTGCACAGCTTGAGCTGGGCCCTGCGTGGTTATGAGGAGCTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: THLQLLHRHQEPTATTSSQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTATGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 2 (lower is better)
Translates to: QTLPENHVWPGAATQSPVWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCTGTGCCATCTCTGCTTaGTTGGGGGCAGCAGGTACC +
Preference number: 2 (lower is better)
Translates to: GTEYSSSTRSWGTSPASPCAISA*LGAAGT
Trigger: GGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACA...GGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGA +
Preference number: 2 (lower is better)
Translates to: QTLPENHVWPGAATQSPVPQLTM*SFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGG...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATA +
Preference number: 2 (lower is better)
Translates to: AAEISRQATTPPGPDASNSTTEL*PRAKAI
Trigger: TATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCT...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCAGGATCTCACCTTCATaGCTCCACACCAAGCAGACA +
Preference number: 2 (lower is better)
Translates to: VGLESQGGGAKPVGKPRIRISPS*LHTKQT
Trigger: TGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCT...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCATACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 2 (lower is better)
Translates to: GPGESGRGCQAGREAQDPYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...TGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp CCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGGATTCGTCGGTCAGGTaGTACAGGTTTGTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: PSVAALHRRSLRLWLGASDSSVR*YRFVVC
Trigger: GCAGACAACAAACCTGTAGCACCTGACCGACGAATC...CGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GATACAGGGCCCCTGTATCAGTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATG +
Preference number: 2 (lower is better)
Translates to: DTGPLYQSLPAVAKSQPEVITQA*LSWAAM
Trigger: CATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCAC...CTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACCCCGCCAGGGCCCGATaGCAGCAACAGGAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: VASPQQARRHGGIHLHCHPARAR*QQQELL
Trigger: GAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GGTAGGGAAGCCCAGGATCCACTGGAGGCTCCAGGACAGTGGAGTCATGGTCTACCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: GREAQDPLEAPGQWSHGLPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...TAGACCATGACTCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTTCCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAA +
Preference number: 2 (lower is better)
Translates to: ESGRGCQAGREAQDPLEASLECT*PTTGLE
Trigger: TTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCT...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGCATGACGTCCACAGCAGCAGTTaGAGTGTTGATGGGGACAAC +
Preference number: 2 (lower is better)
Translates to: PENHVWPGAATQSPVQHDVHSSS*SVDGDN
Trigger: GTTGTCCCCATCAACACTCCAACTGCTGCTGTGGAC...GTCATGCTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GGTAGGGAAGCCCAGGATCCACTGGAGGCTCCAGGACAGTGGAGTCATGGTCTAGGGCAGGGTAGACACTaGGCCCAACCCAGTGAAAGC +
Preference number: 2 (lower is better)
Translates to: GREAQDPLEAPGQWSHGLGQGRH*AQPSES
Trigger: GCTTTCACTGGGTTGGGCCCAGTGTCTACCCTGCCC...TAGACCATGACTCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTTCCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTTCCGGAGAATCACGTGTaGCCGGGTGCAGCCACCCAG +
Preference number: 2 (lower is better)
Translates to: PLVGCLVCKGVDLEDTSLPENHV*PGAATQ
Trigger: CTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG...AAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp TCAGTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCCGAG +
Preference number: 2 (lower is better)
Translates to: SVTASSRQEPARVTA*SVPGLLRDLKQRAE
Trigger: CTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp CTTGGGGGCAGCAGGTACCGACAACGTTCCTTGACAAAGATGGCCTaGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTACCCCG +
Preference number: 2 (lower is better)
Translates to: LGGSRYRQRSLTKMA*PEGAAEISRQATTP
Trigger: CGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp AGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGCCACCCCAGGGTCCTTaGGCAGACCTGGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SISTASTKTWRDPSSLPLPPQGP*ADLVWR
Trigger: CCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGG...CAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTAAGCCACCATGGCATGTaGCTGAGGTCACACCCTGCT +
Preference number: 2 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVSHHGM*LRSHPA
Trigger: AGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCT...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAATGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 2 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp CGGCTTGGGGTGCTGGGGTCCGGAGTAACCATGATGCTGAAGCAGTGCATCTCAAGTGCCACAGCCGAATaGCTGAGTCATCACCCCCAG +
Preference number: 2 (lower is better)
Translates to: RLGVLGSGVTMMLKQCISSATAE*LSHHPQ
Trigger: CTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACT...TGAGATGCACTGCTTCAGCATCATGGTTACTCCGGACCCCAGCACCCCAAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGCTCGGGACCAGGAGCTaGCTCCAGCAGGCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: SRTVESWSSMVVRSQKARLGTRS*LQQAVG
Trigger: TCCTACTGCCTGCTGGAGGCAGCTCCTGGTCCCGAG...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTCACGTGTGGCCGGGTaGAGCCACCCAGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VASPQQARRHGGIHLHCHSRVAG*SHPEPC
Trigger: ACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGA...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTT +
Preference number: 2 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVSRAYS*QHSTHL
Trigger: AAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACT...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR CCA 90 bp TTGACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCCAGCACCTGCCACTATaGTCAGCTCCTTCCAGGCGT +
Preference number: 2 (lower is better)
Translates to: LTCHTRALCPKQCPIFCTQHLPL*SAPSRR
Trigger: ACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTG...GGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp AGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SISTASTKTWRDPSSLPLRIPRP*CPRKAW
Trigger: CCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCG...CAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GGTAGGGAAGCCCAGGATCCACTGGAGGCTCCAGGACAGTGGAGTCATGGTCTACCATCTCTGCTTGCTTaGGGGCAGCAGGTACCGACA +
Preference number: 2 (lower is better)
Translates to: GREAQDPLEAPGQWSHGLPSLLA*GQQVPT
Trigger: TGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGG...TAGACCATGACTCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTTCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp TCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGTGCCCAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 2 (lower is better)
Translates to: SGCMKLGTPYSGPRVMVPRTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...GGGCACCATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CGGCTTGGGGTGCTGGGGTCCGGAGTAACCATGATGCTGAAGCAGTGCATCTCATGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 2 (lower is better)
Translates to: RLGVLGSGVTMMLKQCISCLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...TGAGATGCACTGCTTCAGCATCATGGTTACTCCGGACCCCAGCACCCCAAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACGGTGGCCCTCACGGGTaGGCAAGGTGTGCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: VASPQQARRHGGIHLHCHGGPHG*ARCAGC
Trigger: ACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACC...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp TGCCATCTCTGCTTGCTTGGGGGCAGCAGGTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGG +
Preference number: 2 (lower is better)
Translates to: CHLCLLGGSRYRQRS*TKMALPEGAAEISR
Trigger: CCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp GCCTCAGTATCAGAGAATGCCCACGAACGGTGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACA +
Preference number: 2 (lower is better)
Translates to: ASVSENAHERCPPPQ*TMCSFSCDRGFHTT
Trigger: TGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTTCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: QQALSLSGASTTPLWSDVSACSF*ELCVRC
Trigger: GCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGA...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp TTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTCTCGGGACCAGGAGCTaGCTCCAGCAGGCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: LTKMALPEGAAEISRQATLGTRS*LQQAVG
Trigger: TCCTACTGCCTGCTGGAGGCAGCTCCTGGTCCCGAG...AGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGCCTCGACAGGACTTCTaGCTTAGGACTGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLPRQDF*LRTGWS
Trigger: GCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGG...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGCCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTG +
Preference number: 2 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLPPLVG*LVCKGV
Trigger: CACTCCTTTACACACGAGGCACCCAACCAGAGGCGG...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVRTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTAGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 2 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVEAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp AGGGTCTGGTCCACAGCAGCAGTTGGAGTGTTGATGGGGACAACCTaGACACGACCTTCCCCATTGGCCATAGCACACAATCCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: RVWSTAAVGVLMGTT*TRPSPLAIAHNPKP
Trigger: GGGCTTCGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGCTGTGGACCAGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp AGCCTCCGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGGTGGAAGGTTTCAGCAAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: SLRLWLGASCVKEWT*RTHRLWWKVSARSC
Trigger: GCAGCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp GCTGGTAGTAGGCTCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGTGCCCACATGCCCACTaGTTCGTCGGTCAGGTGCTA +
Preference number: 2 (lower is better)
Translates to: AGSRLHHALWYTHSHHGMCPHAH*FVGQVL
Trigger: TAGCACCTGACCGACGAATCAGTGGGCATGTGGGCA...CATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGAGCCTACTACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp AGTGCGTGGGCTGAGCCTGTGGTTGTAGGGAGTGCTAGGACACAGACAGTAGTGGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGAT +
Preference number: 2 (lower is better)
Translates to: SAWAEPVVVGSARTQTVVAAPST*PRRHRD
Trigger: ATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGC...CACTACTGTCTGTGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp CGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCCACGCTTTACACAAGTaGTCTCACGGCCATGCAGAC +
Preference number: 2 (lower is better)
Translates to: RLWLGASCVKEWTLRTHRHALHK*SHGHAD
Trigger: GTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTG...GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp AGGTCATCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: RSSGCMKLGTPYSGPRVMQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...CATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR GCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGGAGCTGTGCGTGAGGTaGTCCATACTGGCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEELCVR*SILAWL
Trigger: TAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp GATACAGGGCCCCTGTATCAGTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGGATTCGTCGGTCAGGTaGTACAGGTTTGTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: DTGPLYQSLPAVAKSQPEDSSVR*YRFVVC
Trigger: GCAGACAACAAACCTGTAGCACCTGACCGACGAATC...CTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: VLFMKVGSPCPRRQKVSRLSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...ACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 2 (lower is better)
Translates to: GTEYSSSTRSWGTSPASPIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...GGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACAAACACAGCCACCATaGCCTCCAAGTCAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVQTQPP*PPSQGL
Trigger: GAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTG...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp AGGTCATCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGTGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 2 (lower is better)
Translates to: RSSGCMKLGTPYSGPRVMCLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...CATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTATATTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 2 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVILPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTAATAT...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACCATGCAGCTGTCAGGTaGAGCCTGCAAGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: VASPQQARRHGGIHLHCHHAAVR*SLQAWE
Trigger: CTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATG...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CAA 90 bp AAGTCACCTGGGGGTAGGAAGGCACTGCATGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTACCGACAACGTTCCTTGACAAAGATG +
Preference number: 2 (lower is better)
Translates to: KSPGGRKALHVCHLC*LGGSRYRQRSLTKM
Trigger: CATCTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATGCAGTGCCTTCCTACCCCCAGGTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp GACATGTACCTGGTCTCTGGGTCTACCTTAACCATCCGATGCCGATaGCGTTGCCGGTCCCAATACTCATCTAGCCGGTGGGACGAAAGG +
Preference number: 2 (lower is better)
Translates to: DMYLVSGSTLTIRCR*RCRSQYSSSRWDER
Trigger: CCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTACATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR TCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: RWASDSVSVSRYASSWYSSACSF*ELCVRC
Trigger: GCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGA...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR TCA 90 bp AGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGTCCAATCAGGCAGGCTaGAGAGAGGGTGCACCTGTC +
Preference number: 2 (lower is better)
Translates to: SISTASTKTWRDPSSLPLSNQAG*REGAPV
Trigger: GACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGA...CAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGAATTCTCTAGAAGCTTaGCCTGCCACACACGGGCGC +
Preference number: 2 (lower is better)
Translates to: SRTVESWSSMVVRSQKARNSLEA*PATHGR
Trigger: GCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAATT...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp CTTGACCTCGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTGCCAGCAGAATTCTCTAGAAGCTTaGCCTGCCACACACGGGCGC +
Preference number: 2 (lower is better)
Translates to: LDLDVIEIQGPCISHCQQNSLEA*PATHGR
Trigger: GCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAATT...CTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTGAGCTGTGCGTGAGGTaGTCCATACTGGCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: QQALSLSGASTTPLWSDVELCVR*SILAWL
Trigger: TAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGAGCTGTGCGTGAGGTaGTCCATACTGGCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPELCVR*SILAWL
Trigger: TAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: VSSFQASPIRQAEERVHLFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTGGGTGCACCTGTCTGTaGAGGGCACCTCTTGCAGGA +
Preference number: 2 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRAGCTCL*RAPLAG
Trigger: TCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCC...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATG +
Preference number: 2 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGVITQA*LSWAAM
Trigger: CATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCAC...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGTTATCCTCTAGCAGCTaGTCCCAGCACTTGACCTCG +
Preference number: 2 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLLSSSS*SQHLTS
Trigger: CGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAA...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp TCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCAGAGCGCCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: SSQRASQIQSDMFHRPERQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...GCGCTCTGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTTAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATA +
Preference number: 2 (lower is better)
Translates to: PLVGCLVCKGVDLEDTSLSTTEL*PRAKAI
Trigger: TATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCT...AAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGTACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCC +
Preference number: 2 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLYQTKS*LETAPA
Trigger: GGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTA...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CTCTGGGTCTACCTTAACCATCCGATGCCGATTGCGTTGCCGGTCCCAATACTCTGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGG +
Preference number: 2 (lower is better)
Translates to: LWVYLNHPMPIALPVPILCPRKA*RISPSW
Trigger: CCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACA...GAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp GGTAGGGAAGCCCAGGATCCACTGGAGGCTCCAGGACAGTGGAGTCATGGTCTACTCCATCACGCCCTGTaGTATACACATAGCCACCAT +
Preference number: 2 (lower is better)
Translates to: GREAQDPLEAPGQWSHGLLHHAL*YTHSHH
Trigger: ATGGTGGCTATGTGTATACCACAGGGCGTGATGGAG...TAGACCATGACTCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTTCCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp CAGAAGTGGCCCTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACCATGGCCTCCAAGTCAAGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: QKWPCPQLIFTTRSP*LPNTATMASKSRSP
Trigger: TGGAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAGGGCCACTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp TTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTGGTaGGAAACAGCACCTGCCACTATGGTCAGCTCCTTCCAGGCGTCT +
Preference number: 2 (lower is better)
Translates to: LLSAKAVAGYQTKSW*ETAPATMVSSFQAS
Trigger: AGACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp ATGCCCACATGCCCACTGATTCGTCGGTCAGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: MPTCPLIRRSGATGL*SAKAVAGYQTKSWL
Trigger: CAACCAGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCGACGAATCAGTGGGCATGTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp ATGATGCCCACATGCCCACTGATTCGTCGGTCAGGTGCTACAGGTTaGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: MMPTCPLIRRSGATG*LSAKAVAGYQTKSW
Trigger: CCAGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCGACGAATCAGTGGGCATGTGGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp TGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAAAAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: CSFSCDRGFHTTNSLAWKRLKRG*TCLCRA
Trigger: TGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCT...TTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTGTTGGAAACAGCACCTaGCACTATGGTCAGCTCCTT +
Preference number: 2 (lower is better)
Translates to: VLFMKVGSPCPRRQKVSRVGNST*HYGQLL
Trigger: AAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAAC...ACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTAAGATGATGCCCACATaGCCACTGATTCGTCGGTCA +
Preference number: 2 (lower is better)
Translates to: VLFMKVGSPCPRRQKVSRKMMPT*PLIRRS
Trigger: TGACCGACGAATCAGTGGGCATGTGGGCATCATCTT...ACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAGGGGTAGGAAGGCACTaGATGTGTGCCATCTCTGCT +
Preference number: 2 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGGVGRH*MCAISA
Trigger: AGCAGAGATGGCACACATGCAGTGCCTTCCTACCCC...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTACCCATACCACACCCTaGCCAGGAGCATATATTACC +
Preference number: 2 (lower is better)
Translates to: VLFMKVGSPCPRRQKVSRTHTTP*PGAYIT
Trigger: GGTAATATATGCTCCTGGGCAGGGTGTGGTATGGGT...ACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGTGCTCCATACTGGCCTaGCTATGCTGGGTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: STQQNGVGRAERYRVKAKCSILA*LCWVSL
Trigger: GAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCA...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp GTGCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTAGGATCTCACCTTCATaGCTCCACACCAAGCAGACA +
Preference number: 2 (lower is better)
Translates to: VLFMKVGSPCPRRQKVSRRISPS*LHTKQT
Trigger: TGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCT...ACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGGGTAAGCAAAGGCCATaGCCGCCTCAGTATCAGAGA +
Preference number: 2 (lower is better)
Translates to: SRTVESWSSMVVRSQKARGKQRP*PPQYQR
Trigger: TCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACC...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GACATGCTGAAGATGATGCCCACATGCCCACTGATTCGTCGGTCAGGTGCTACATGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 2 (lower is better)
Translates to: DMLKMMPTCPLIRRSGATWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...TGTAGCACCTGACCGACGAATCAGTGGGCATGTGGGCATCATCTTCAGCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTGTGCAGGGCACCTCTTaGAGGATGCACCCTACTACA +
Preference number: 2 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRAVQGTS*RMHPTT
Trigger: TGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCAC...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp CCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTTCAAGGGACATGTACCTaGAGAGACAACATGCAGCTG +
Preference number: 2 (lower is better)
Translates to: PLVGCLVCKGVDLEDTSLQGTCT*RDNMQL
Trigger: CAGCTGCATGTTGTCTCTGCAGGTACATGTCCCTTG...AAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGACAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTA +
Preference number: 2 (lower is better)
Translates to: QSHSLECTWPTTGLEAESRPRAG*KQHLPL
Trigger: TAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCT...GCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp ATGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATaGGCATGGAAACCCAGGATAACCATGCTCCCATCGGGCACTATA +
Preference number: 2 (lower is better)
Translates to: MCSFSCDRGFHTTNS*AWKPRITMLPSGTI
Trigger: TATAGTGCCCGATGGGAGCATGGTTATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp ATATATTACCTGGTCTCTGGGTCTACCTTAACCATCCGATGCCGATaGCGTTGCCGGTCCCAATACTCATCTAGCCGGTGGGACGAAAGG +
Preference number: 2 (lower is better)
Translates to: IYYLVSGSTLTIRCR*RCRSQYSSSRWDER
Trigger: CCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTAATATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR TCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACA +
Preference number: 2 (lower is better)
Translates to: RWASDSVSVSRYASSWYSWVSLH*ATFKAT
Trigger: TGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCA...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR TCA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTATGTCCTCACTACATGTaGTCACAATGTCAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVCPHYM*SQCQSS
Trigger: ACTTGACTGACATTGTGATCACATGTAGTGAGGACA...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: KRWASDSVSVSRYASSWYQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: SRTVESWSSMVVRSQKARFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR GCA 90 bp AGTGTTGATGGGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAAGCACCTCTTGCAGGATaGACCCTACTACAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: SVDGDNLDTTFPIGHSTQAPLAG*TLLQGH
Trigger: ATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGC...TTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp CAGATACGAACGCTTCGGTCTTCTGAAGCTGTAGCCAGCAATCCCTaGCTTTCCAGGTATGACATGCTGAAGATGATGCCCACATGCCCA +
Preference number: 2 (lower is better)
Translates to: QIRTLRSSEAVASNP*LSRYDMLKMMPTCP
Trigger: TGGGCATGTGGGCATCATCTTCAGCATGTCATACCTGGAAAGCAAGGGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTTCGTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACTGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACA +
Preference number: 2 (lower is better)
Translates to: KRWASDSVSVSRYASSWYWVSLH*ATFKAT
Trigger: TGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCA...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR TCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACTACACATCCTGGGGGTaGGCACACAGCAAAATGGGG +
Preference number: 2 (lower is better)
Translates to: KRWASDSVSVSRYASSWYYTSWG*AHSKMG
Trigger: CCCCATTTTGCTGTGTGCTCACCCCCAGGATGTGTA...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp AGTGTTGATGGGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAAAAGATGATGCCCACATaGCCACTGATTCGTCGGTCA +
Preference number: 2 (lower is better)
Translates to: SVDGDNLDTTFPIGHSTQKMMPT*PLIRRS
Trigger: TGACCGACGAATCAGTGGGCATGTGGGCATCATCTT...TTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATGAGCACACAGCAAAATaGGGTGGGACGTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHEHTAK*GGTCRE
Trigger: CTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTC...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACATCGACCACACCTCTTTaGTCAGATGTTCGTCCGCCT +
Preference number: 2 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTSTTPL*SDVRPP
Trigger: AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGA...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTT +
Preference number: 2 (lower is better)
Translates to: KRWASDSVSVSRYASSWYSRAYS*QHSTHL
Trigger: AAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACT...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTT +
Preference number: 2 (lower is better)
Translates to: STQQNGVGRAERYRVKAKSSVLS*GVGHIL
Trigger: AAGAATATGCCCGACTCCCCATGACAAGACAGAACT...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp ACACAGACAGTAGTGTCCTCACTACATGTGATCACAATGTCAGTCAAGTCGGGCCTCCATCACGCCCTGTaGTATACACATAGCCACCAT +
Preference number: 2 (lower is better)
Translates to: TQTVVSSLHVITMSVKSGLHHAL*YTHSHH
Trigger: ATGGTGGCTATGTGTATACCACAGGGCGTGATGGAG...GCCCGACTTGACTGACATTGTGATCACATGTAGTGAGGACACTACTGTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 90 bp CCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACC +
Preference number: 2 (lower is better)
Translates to: PTAKINWYCLLQSSV*SWGVGHILGSTPLT
Trigger: GGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp ACACAGACAGTAGTGTCCTCACTACATGTGATCACAATGTCAGTCAAGTCGGGCAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTT +
Preference number: 2 (lower is better)
Translates to: TQTVVSSLHVITMSVKSGSSVLS*GVGHIL
Trigger: AAGAATATGCCCGACTCCCCATGACAAGACAGAACT...GCCCGACTTGACTGACATTGTGATCACATGTAGTGAGGACACTACTGTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR CCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGG +
Preference number: 2 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRLRPVT*AACAQG
Trigger: CCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAA...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR GCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR GCA 90 bp ACACAGACAGTAGTGTCCTCACTACATGTGATCACAATGTCAGTCAAGTCGGGCGACACAATCCTCTCCTaGACTGATAAGGTAATTCTC +
Preference number: 2 (lower is better)
Translates to: TQTVVSSLHVITMSVKSGDTILS*TDKVIL
Trigger: GAGAATTACCTTATCAGTGCAGGAGAGGATTGTGTC...GCCCGACTTGACTGACATTGTGATCACATGTAGTGAGGACACTACTGTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR TCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCC +
Preference number: 2 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMNASVF*SCSQQS
Trigger: GGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTT...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR TCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGACCGACAACGTTCCTTaGCAAAGATGGCCTTGCCAG +
Preference number: 2 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMTDNVP*QRWPCQ
Trigger: CTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGT...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR GCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGCAACTCGGAGTCCCTTaGTTCCAAACACAGCCACCA +
Preference number: 2 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMQLGVP*FQTQPP
Trigger: TGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTG...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR GCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGTCCCTCAAGCCAGCGTaGATCCCAAATCCAGTCAGA +
Preference number: 2 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRSLKPA*IPNPVR
Trigger: TCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGA...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR CCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGTCGACCACACCTCTTTaGTCAGATGTTCGTCCGCCT +
Preference number: 2 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRSTTPL*SDVRPP
Trigger: AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGA...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTT +
Preference number: 2 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRSRAYS*QHSTHL
Trigger: AAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACT...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTA +
Preference number: 2 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMRPRAG*KQHLPL
Trigger: TAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCT...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR CCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGCATGTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 2 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMHVPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTACATG...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR GCA 72 bp ACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACTCGCAGGTCGCCCACC +
Preference number: 3 (lower is better)
Translates to: TRALCPKQCPIF*TRPPGTRRSPT
Trigger: GGTGGGCGACCTGCGAGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp TTGACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGACCCCCAGGCACTCGC +
Preference number: 3 (lower is better)
Translates to: LTCHTRALCPKQ*PIFCTRPPGTR
Trigger: GCGAGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp TCGGGCCCCTCACTGCCAGGCTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCATATTCAGGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: SGPSLPGSRSSG*MKLGTPYSGPR
Trigger: CCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GGTGAGATCCCAGAAAGCCAGGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GEIPESQAAISS*AAQEEPPPLVG
Trigger: CCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCTTTCTGGGATCTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp GCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGGCTCCACACCAAGCAG +
Preference number: 3 (lower is better)
Translates to: ARIPRPWCPRKA*RISPSWLHTKQ
Trigger: CTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp GGTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTaGAGAGAGGGTGCACCTGTCTGTGCAGGGCACCTC +
Preference number: 3 (lower is better)
Translates to: GQLLPGVSNQAG*REGAPVCAGHL
Trigger: GAGGTGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp CCCAATACTCATCTAGCCGGTGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGCTTGGGGTGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: PNTHLAGGTKGA*HGRRGGLGCWG
Trigger: ACCCCAGCACCCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp CGGTCCCAATACTCATCTAGCCGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGGCGGCTTGGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: RSQYSSSRWDER*MTWQARRLGVL
Trigger: CAGCACCCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp CTCTCATGGGCAGCTATGGCCCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCA +
Preference number: 3 (lower is better)
Translates to: LSWAAMARIPRP*CPRKAWRISPS
Trigger: TGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp AGGGATCCATCTTCACTGCCACTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTG +
Preference number: 3 (lower is better)
Translates to: RDPSSLPLATRW*PSRVGKVCRLL
Trigger: CAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp GGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: GTEYSSSTRSWGTSPASPKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...GGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp TCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCACCTCTTGCAGGATGC +
Preference number: 3 (lower is better)
Translates to: SRRLQSGRLKRG*TCLCRAPLAGC
Trigger: GCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp CCTGGGGGTAGGAAGGCACTGCATGTGTGCCATCTCTaGTTGCTTGGGGGCAGCAGGTACCGACAACGTTCC +
Preference number: 3 (lower is better)
Translates to: PGGRKALHVCHL*LLGGSRYRQRS
Trigger: GGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATGCAGTGCCTTCCTACCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GCCCACGAACGGTGCCCTCCACCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGAGGGTTCCACACCACA +
Preference number: 3 (lower is better)
Translates to: AHERCPPPQLTM*SFSCDRGFHTT
Trigger: TGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GTGCCCACACGCTTTACACAAGTGATCTCACGGCCATaGAGACCCTCCCGGAGAATCACGTGTGGCCGGGTG +
Preference number: 3 (lower is better)
Translates to: VPTRFTQVISRP*RPSRRITCGRV
Trigger: CACCCGGCCACACGTGATTCTCCGGGAGGGTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTGTGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp TGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTGGACCTTGAGGACACA +
Preference number: 3 (lower is better)
Translates to: CAAQEEPPPLVG*LVCKGVDLEDT
Trigger: TGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp CGATTGCGTTGCCGGTCCCAATACTCATCTAGCCGGTaGGACGAAAGGTGCATGACATGGCAGGCGAGGCGG +
Preference number: 3 (lower is better)
Translates to: RLRCRSQYSSSR*DERCMTWQARR
Trigger: CCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp CCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATACGAACGCTTCGGTGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCT +
Preference number: 3 (lower is better)
Translates to: PDPQALAGRPPSRYERFGGATGL*SAKAVA
Trigger: AGCAACTGCCTTAGCAGACAACAAACCTGTAGCACC...ACCGAAGCGTTCGTATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp GCAGCTATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCGTAGCCAGCAATCCCTaGCTTTCCAGGTATGACATG +
Preference number: 3 (lower is better)
Translates to: AAMARIPRPWCPRKAWRIVASNP*LSRYDM
Trigger: CATGTCATACCTGGAAAGCAAGGGATTGCTGGCTAC...GATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp CGGCTTGGGGTGCTGGGGTCCGGAGTAACCATGATGCTGAAGCAGTGCATCTCAGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTAC +
Preference number: 3 (lower is better)
Translates to: RLGVLGSGVTMMLKQCISVCHLC*LGGSRY
Trigger: GTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACAC...TGAGATGCACTGCTTCAGCATCATGGTTACTCCGGACCCCAGCACCCCAAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp GCTTGCTTGGGGGCAGCAGGTACCGACAACGTTCCTTaGCAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: ACLGAAGTDNVP*QRWPCQRVRLR
Trigger: TCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp CAGAGAATGCCCACGAACGGTGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGTGTGACCGAGGGTTCC +
Preference number: 3 (lower is better)
Translates to: QRMPTNGALHHS*RCAASRVTEGS
Trigger: GGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp AGGAAGTCACCTGGGGGTAGGAAGGCACTGCATGTGTaGCATCTCTGCTTGCTTGGGGGCAGCAGGTACCGA +
Preference number: 3 (lower is better)
Translates to: RKSPGGRKALHV*HLCLLGGSRYR
Trigger: TCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATGCAGTGCCTTCCTACCCCCAGGTGACTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp AGACAACATGCAGCTGTCAGGTGGAGCCTGCAAGCCTaGGAGCATCTGCATGACCCATACCACACCCTGCCC +
Preference number: 3 (lower is better)
Translates to: RQHAAVRWSLQA*EHLHDPYHTLP
Trigger: GGGCAGGGTGTGGTATGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CAA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACAGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTA +
Preference number: 3 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTARVTA*SVPGLL
Trigger: TAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGC...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACACACCACAAACTCATaGGCATGGAAACCCAGGATA +
Preference number: 3 (lower is better)
Translates to: QTLPENHVWPGAATQSPVHTTNS*AWKPRI
Trigger: TATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTG...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp GGTAGGGAAGCCCAGGATCCACTGGAGGCTCCAGGACAGTGGAGTCATGGTCTAGAGTCGGGCATATTCTaGGCAGCACTCCACTCACCT +
Preference number: 3 (lower is better)
Translates to: GREAQDPLEAPGQWSHGLESGIF*AALHSP
Trigger: AGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTC...TAGACCATGACTCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTTCCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR CAA 90 bp GTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACC +
Preference number: 3 (lower is better)
Translates to: VTASSRQEPARVTALSVPTTRSP*LPNTAT
Trigger: GGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGT...AGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp CAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTTTGATGGGGACAACCTaGACACGACCTTCCCCATTG +
Preference number: 3 (lower is better)
Translates to: QEEPPPLVGCLVCKGVDLLMGTT*TRPSPL
Trigger: CAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAA...AAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp ACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGCTCCATACTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: TSLVRCSSACSF*ELCVRCSILAW
Trigger: CCAGGCCAGTATGGAGCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR TCA 72 bp CCCTGTGGTATACACATAGCCACCATGGCATGTGACTaGGGTCACACCCTGCTTCCCGTGCAGAGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: PCGIHIATMACD*GHTLLPVQRGQ
Trigger: CTGCCCTCTCTGCACGGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCTATGTGTATACCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp TTCTCTAGAAGCTTGACCTGCCACACACGGGCGCTGTaGCCAAAGCAGTGCCCAATATTCTGCACCCGACCC +
Preference number: 3 (lower is better)
Translates to: FSRSLTCHTRAL*PKQCPIFCTRP
Trigger: GGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTaGCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGC +
Preference number: 3 (lower is better)
Translates to: DVIEIQGPCISH*QQSPRASQSHS
Trigger: GCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp CATCGGGCACTATACGGAGCCCAGCTAGCCAGTTCATaGCTCGACAGGACTTCTGCCTTAGGACTGGCTGGA +
Preference number: 3 (lower is better)
Translates to: HRALYGAQLASS*LDRTSALGLAG
Trigger: TCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGGCATGAACTGGCTAGCTGGGCTCCGTATAGTGCCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp ATGGCCGCCTCAGTATCAGAGAATGCCCACGAACGGTaGCCTCCACCACAGTTGACGATGTGCAGCTTCTCG +
Preference number: 3 (lower is better)
Translates to: MAASVSENAHER*PPPQLTMCSFS
Trigger: CGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAGGCGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp CCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAAGCAGAGAGCCGAGAC +
Preference number: 3 (lower is better)
Translates to: PRASQSHSLECT*PTTGLEAESRD
Trigger: GTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGAGTCGGGCATATTCTaGGCAGCACTCCACTCACCT +
Preference number: 3 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLESGIF*AALHSP
Trigger: AGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTC...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CAA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCTCGACCACACCTCTTaGGTCAGATGTTCGTCCGCC +
Preference number: 3 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGELDHTS*VRCSSA
Trigger: GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CAA 90 bp CAATGCCCCACACAGCCACAGCACGTACCGAGGAGATATGGTTACAAACAGCTGGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTAC +
Preference number: 3 (lower is better)
Translates to: QCPTQPQHVPRRYGYKQLVCHLC*LGGSRY
Trigger: GTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACAC...CAGCTGTTTGTAACCATATCTCCTCGGTACGTGCTGTGGCTGTGTGGGGCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp AGCACGCCAGCCACCGCAGGATACCTCAGTCATACCAGTTGTAAACCTCAAGCCACCATCCGATGCCGATaGCGTTGCCGGTCCCAATAC +
Preference number: 3 (lower is better)
Translates to: STPATAGYLSHTSCKPQATIRCR*RCRSQY
Trigger: GTATTGGGACCGGCAACGCAATCGGCATCGGATGGT...GGCTTGAGGTTTACAACTGGTATGACTGAGGTATCCTGCGGTGGCTGGCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp GGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACCATGATGCTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: GSPCPRRQKVSR*SMEAETMMLGL
Trigger: AAGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GCCCAGGGCCAAGGCTATATTTCCCTCAAGCCAGCGTaGATCCCAAATCCAGTCAGACATGTTCCACAGGCC +
Preference number: 3 (lower is better)
Translates to: AQGQGYISLKPA*IPNPVRHVPQA
Trigger: GGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGAAATATAGCCTTGGCCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATaGACCCTACTACAGGGTCATATAGCACCACTGAGT +
Preference number: 3 (lower is better)
Translates to: GCTCLCRAPLAG*TLLQGHIAPLS
Trigger: ACTCAGTGGTGCTATATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GTAAGCAAAGGCCATGGCCGCCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCCACCACAGTTGACGAT +
Preference number: 3 (lower is better)
Translates to: VSKGHGRLSIRE*PRTVPSTTVDD
Trigger: ATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp ACCTGCAGAGACAACATGCAGCTGTCAGGTGGAGCCTaGAAGCCTGGGAGCATCTGCATGACCCATACCACA +
Preference number: 3 (lower is better)
Translates to: TCRDNMQLSGGA*KPGSICMTHTT
Trigger: TGTGGTATGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR GCA 72 bp ACACACAGCAAGGGACATGTACCTGCAGAGACAACATaGAGCTGTCAGGTGGAGCCTGCAAGCCTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: THSKGHVPAETT*SCQVEPASLGA
Trigger: TGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGGTACATGTCCCTTGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CCA 72 bp CACCATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATGGATAAGATAGTGGCC +
Preference number: 3 (lower is better)
Translates to: HHGLQVKVSIRL*PYPEAMDKIVA
Trigger: GGCCACTATCTTATCCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp TGGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATaGCTCCACACCAAGCAGACACAATCCTCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: WCPRKAWRISPS*LHTKQTQSSPA
Trigger: TGCAGGAGAGGATTGTGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp CAGCTCAAGCTGTGCACCTTCCCAGGAAACAGGGTCTaGTCCACAGCAGCAGTTGGAGTGTTGATGGGGACA +
Preference number: 3 (lower is better)
Translates to: QLKLCTFPGNRV*STAAVGVLMGT
Trigger: TGTCCCCATCAACACTCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTGCACAGCTTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp ATGCCCCACACAGCCACAGCACGTACCGAGGAGATATaGTTACAAACAGCTGTGAGTGCGTGGGCTGAGCCT +
Preference number: 3 (lower is better)
Translates to: MPHTATARTEEI*LQTAVSAWAEP
Trigger: AGGCTCAGCCCACGCACTCACAGCTGTTTGTAACCATATCTCCTCGGTACGTGCTGTGGCTGTGTGGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp GACATGTACCTGCAGAGACAACATGCAGCTGTCAGGTaGAGCCTGCAAGCCTGGGAGCATCTGCATGACCCA +
Preference number: 3 (lower is better)
Translates to: DMYLQRQHAAVR*SLQAWEHLHDP
Trigger: TGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGGTACATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CAA 90 bp CACACAGCAAGGGACATGTACCTGGTCTCTGGGTCTACCTTAACCATCCGATGCTGTGCAGGGCACCTCTaGCAGGATGCACCCTACTAC +
Preference number: 3 (lower is better)
Translates to: HTARDMYLVSGSTLTIRCCAGHL*QDAPYY
Trigger: GTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACA...GCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTACATGTCCCTTGCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR TCA 72 bp TCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACAGAGGCTCCAATACCT +
Preference number: 3 (lower is better)
Translates to: SILAWLCWVSLH*ATFKATEAPIP
Trigger: AGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR TCA 72 bp CCCTCCACCACAGTTGACGATGTGCAGCTTCTCGTGTaGCCGAGGGTTCCACACCACAAACTCATTGGCATG +
Preference number: 3 (lower is better)
Translates to: PSTTVDDVQLLV*PRVPHHKLIGM
Trigger: CATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp CAGCCACATCAGGCACATGGAACACAGTGCTATTCATaGAGGTGGGTTCACCATGCCCCAGACGCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: QPHQAHGTQCYS*RWVHHAPDARR
Trigger: CCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCACTGTGTTCCATGTGCCTGATGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp TCTGGGTCTACCTTAACCATCCGATGCCGATTGCGTTaGCGGTCCCAATACTCATCTAGCCGGTGGGACGAA +
Preference number: 3 (lower is better)
Translates to: SGSTLTIRCRLR*RSQYSSSRWDE
Trigger: TTCGTCCCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp ATGTTCCACAGGCCAGAGCGCCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATTTTCACAACTCGGAGT +
Preference number: 3 (lower is better)
Translates to: MFHRPERQSSQK*PCPQLIFTTRS
Trigger: ACTCCGAGTTGTGAAAATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTGGCGCTCTGGCCTGTGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp TCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCCACTATGGTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SAKAVAGYQTKS*LETAPATMVSS
Trigger: GGAGCTGACCATAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp CTCCGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGCTTATGGTGGAAGGTT +
Preference number: 3 (lower is better)
Translates to: LRLWLGASCVKE*TLRTHRLWWKV
Trigger: AACCTTCCACCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTTGTGCAGGGCACCTCTaGCAGGATGCACCCTACTAC +
Preference number: 3 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRACAGHL*QDAPYY
Trigger: GTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACA...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp ATCCTTGAGGTAAGCAAAGGCCATGGCCGCCTCAGTATCAGAGAATGCCCACGAACACGACCTTCCCCATaGGCCATAGCACACAATCCG +
Preference number: 3 (lower is better)
Translates to: ILEVSKGHGRLSIRECPRTRPSP*AIAHNP
Trigger: CGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGT...TCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACCTCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGGCAGCAGTTGGAGTGTaGATGGGGACAACCTTGACA +
Preference number: 3 (lower is better)
Translates to: SRTVESWSSMVVRSQKARAAVGV*MGTTLT
Trigger: TGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGC...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR TCA 72 bp GTCGCCCACCTTCCAGATACGAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCCCTTGCTTTCCAGGTA +
Preference number: 3 (lower is better)
Translates to: VAHLPDTNASVF*SCSQQSLAFQV
Trigger: TACCTGGAAAGCAAGGGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTTCGTATCTGGAAGGTGGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp CCAAGCAGGTTCTGCACTCGCTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTGTACACCAGGACATCG +
Preference number: 3 (lower is better)
Translates to: PSRFCTRFIIRR*PPKSKLYTRTS
Trigger: CGATGTCCTGGTGTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGCGAGTGCAGAACCTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp AAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTTCAGCTCCTGCACCGA +
Preference number: 3 (lower is better)
Translates to: KFCLVMGSRAYS*QHSTHLQLLHR
Trigger: TCGGTGCAGGAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR CCA 72 bp TGTGACCGAGGGTTCCACACCACAAACTCATTGGCATaGAAACCCAGGATAACCATGCTCCCATCGGGCACT +
Preference number: 3 (lower is better)
Translates to: CDRGFHTTNSLA*KPRITMLPSGT
Trigger: AGTGCCCGATGGGAGCATGGTTATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp ACCGAGGAGATATGGTTACAAACAGCTGTGAGTGCGTaGGCTGAGCCTGTGGTTGTAGGGAGTGCTAGGACA +
Preference number: 3 (lower is better)
Translates to: TEEIWLQTAVSA*AEPVVVGSART
Trigger: TGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACCATATCTCCTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp CCACACCCTGCCCAGGAGCATATATTACCTGGTCTCTaGGTCTACCTTAACCATCCGATGCCGATTGCGTTG +
Preference number: 3 (lower is better)
Translates to: PHPAQEHILPGL*VYLNHPMPIAL
Trigger: CAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTAATATATGCTCCTGGGCAGGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CAA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGTTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCAT +
Preference number: 3 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLLQSSV*SWGVGH
Trigger: ATGCCCGACTCCCCATGACAAGACAGAACTTTGTAA...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CAA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGTCTGCTAAGGCAGTaGCTGGGTACCAGACCAAGA +
Preference number: 3 (lower is better)
Translates to: VASPQQARRHGGIHLHCHCLLRQ*LGTRPR
Trigger: TCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACA...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp CCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTTTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: PLVGCLVCKGVDLEDTSLYRQRS*TKMALP
Trigger: TGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTA...AAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp GTTTCAGCAAGGAGCTGCAGAATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACGGCCCCATCACTACAG +
Preference number: 3 (lower is better)
Translates to: VSARSCRIRPES*KRKSLTAPSLQ
Trigger: CTGTAGTGATGGGGCCGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp ATGTACCTGGTCTCTGGGTCTACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCCCAATACTCATCTAGC +
Preference number: 3 (lower is better)
Translates to: MYLVSGSTLTIR*RLRCRSQYSSS
Trigger: GCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR CCA 72 bp GTAAAGGAGTGGACCTTGAGGACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGCTGCAGAATCCGCCCA +
Preference number: 3 (lower is better)
Translates to: VKEWTLRTHRLW*KVSARSCRIRP
Trigger: TGGGCGGATTCTGCAGCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp ATGATGCTTGGGCTTAGGATCTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGGACAGAGTATTCCTCT +
Preference number: 3 (lower is better)
Translates to: MMLGLRILRPVT*AACAQGTEYSS
Trigger: AGAGGAATACTCTGTCCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCAT +
Preference number: 3 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRLQSSV*SWGVGH
Trigger: ATGCCCGACTCCCCATGACAAGACAGAACTTTGTAA...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CAA 90 bp TCCTTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTTTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCAT +
Preference number: 3 (lower is better)
Translates to: SLTKMALPEGAAEISRQALQSSV*SWGVGH
Trigger: ATGCCCGACTCCCCATGACAAGACAGAACTTTGTAA...AGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR-3UTR CAA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATCTCGACCACACCTCTTaGGTCAGATGTTCGTCCGCC +
Preference number: 3 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHLDHTS*VRCSSA
Trigger: GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CAA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACCTCGACCACACCTCTTaGGTCAGATGTTCGTCCGCC +
Preference number: 3 (lower is better)
Translates to: KRWASDSVSVSRYASSWYLDHTS*VRCSSA
Trigger: GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CAA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCT +
Preference number: 3 (lower is better)
Translates to: VASPQQARRHGGIHLHCHGATGL*SAKAVA
Trigger: AGCAACTGCCTTAGCAGACAACAAACCTGTAGCACC...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR-3UTR CAA 90 bp ATATATTACCTGGTCTCTGGGTCTACCTTAACCATCCGATGCCGATTGCGTTGCTGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCG +
Preference number: 3 (lower is better)
Translates to: IYYLVSGSTLTIRCRLRCCPPPQ*TMCSFS
Trigger: CGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCA...GCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTAATATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR-3UTR CAA 90 bp ATATATTACCTGGTCTCTGGGTCTACCTTAACCATCCGATGCCGATTGCGTTGCACACGACCTTCCCCATaGGCCATAGCACACAATCCG +
Preference number: 3 (lower is better)
Translates to: IYYLVSGSTLTIRCRLRCTRPSP*AIAHNP
Trigger: CGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGT...GCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTAATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR TCA 72 bp GGAAATGTTTATCCTCTAGCAGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGATACAGGGCCCCTGTAT +
Preference number: 3 (lower is better)
Translates to: GNVYPLAAAPST*PRRHRDTGPLY
Trigger: ATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAAACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp CTTTCCAGGTATGACATGCTGAAGATGATGCCCACATaGCCACTGATTCGTCGGTCAGGTGCTACAGGTTTG +
Preference number: 3 (lower is better)
Translates to: LSRYDMLKMMPT*PLIRRSGATGL
Trigger: CAAACCTGTAGCACCTGACCGACGAATCAGTGGGCATGTGGGCATCATCTTCAGCATGTCATACCTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR GCA 72 bp TATTACCTGGTCTCTGGGTCTACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCCCAATACTCATCTAGC +
Preference number: 3 (lower is better)
Translates to: YYLVSGSTLTIR*RLRCRSQYSSS
Trigger: GCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR GCA 72 bp ACACATCGCTTATGGTGGAAGGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCCTGCAAAAGAAAGAGC +
Preference number: 3 (lower is better)
Translates to: THRLWWKVSARS*RIRPESCKRKS
Trigger: GCTCTTTCTTTTGCAGGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CCA 72 bp GTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATaGATTTCAGCTCCTACTACAACCGGGTACACATCC +
Preference number: 3 (lower is better)
Translates to: VSRYASSWYSSA*ISAPTTTGYTS
Trigger: GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR CCA 72 bp TTCTTTATTCTGGCCTGGGGCACAAGAGCAAAGAGATaGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCA +
Preference number: 3 (lower is better)
Translates to: FFILAWGTRAKR*ASDSVSVSRYA
Trigger: TGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTTTGCTCTTGTGCCCCAGGCCAGAATAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR-3UTR CAA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAACACGGCCAAAATAAATaGGTACTGTTTGTTACAAAG +
Preference number: 3 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKHGQNK*VLFVTK
Trigger: CTTTGTAACAAACAGTACCAATTTATTTTGGCCGTG...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR CCA 72 bp AGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTaGTACAGCTCAGCATGGATTTCAGCTCCTACTACA +
Preference number: 3 (lower is better)
Translates to: SDSVSVSRYASS*YSSAWISAPTT
Trigger: TGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCCACCCCAGGGTCCTTaGGCAGACCTGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VGLESQGGGAKPVGKPRIPPQGP*ADLVWR
Trigger: CCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGG...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCGGGGCGCTCCCAGCTaGCAGCCCGCTGCACCTATC +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIRGAPS*QPAAPI
Trigger: GATAGGTGCAGCGGGCTGGCAGCTGGGAGCGCCCCG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395474.7
CDS-3UTR TCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCCCACCCCAGGGTCCTTaGGCAGACCTGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPPPQGP*ADLVWR
Trigger: CCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGG...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGGAGGGCCACCTGGGGTaGCAATGCCCCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: TLPENHVWPGAATQSPVQEGHLG*QCPTQP
Trigger: TGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTC...CTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPRIPRP*CPRKAW
Trigger: CCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCG...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCGGTGGCCCTCACGGGTaGGCAAGGTGTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPGGPHG*ARCAGC
Trigger: ACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACC...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACCCACTGGCCACGAGATaGTGGCCCTCACGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AAEISRQATTPPGPDASNPLATR*WPSRVG
Trigger: GCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGG...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPGTKGA*HGRRGG
Trigger: GCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCC...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATACGAACGCTTCGGTCTCGGGACCAGGAGCTaGCTCCAGCAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: PDPQALAGRPPSRYERFGLGTRS*LQQAVG
Trigger: TCCTACTGCCTGCTGGAGGCAGCTCCTGGTCCCGAG...ACCGAAGCGTTCGTATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCTCACGTGTGGCCGGGTaGAGCCACCCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPISRVAG*SHPEPC
Trigger: ACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGA...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCGGAGAATCACGTGTaGCCGGGTGCAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIPENHV*PGAATQ
Trigger: CTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCCACTGGCCACGAGATaGTGGCCCTCACGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLPLATR*WPSRVG
Trigger: GCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGG...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCCACTGGCCACGAGATaGTGGCCCTCACGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTPLATR*WPSRVG
Trigger: GCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCCTCGCCCCCTCACGTaGCGCTTGCGGGGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEPRPLT*RLRGAP
Trigger: GGGAGCGCCCCGCAAGCGTCACGTGAGGGGGCGAGG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395474.7
CDS-3UTR TCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCGCGGCGGTTGTCCAATaGCGACCCTTCGTCCCACGC +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTAAVVQ*RPFVPR
Trigger: GCGTGGGACGAAGGGTCGTCATTGGACAACCGCCGC...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR TCA 90 bp TGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCCGACCCCCACCCCAGGGTCCTTaGGCAGACCTGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CHTRALCPKQCPIFCTRPPPQGP*ADLVWR
Trigger: CCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGG...GGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCAGCCACCATGGCATGTaGCTGAGGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: VGLESQGGGAKPVGKPRISHHGM*LRSHPA
Trigger: AGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCT...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCTGTGAGTGCGTGGGCTaGGCCTGTGGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPCECVG*ACGCRE
Trigger: CTCCCTACAACCACAGGCTCAGCCCACGCACTCACA...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCGTKGA*HGRRGG
Trigger: GCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACACCCGCCAGGGCCCGATaGCAGCAACAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTPARAR*QQQELL
Trigger: GAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCATGTGTGCCATCTCTaGTTGCTTGGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGLESQGGGAKPVGKPRIHVCHL*LLGGSR
Trigger: CCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATG...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCAGCTATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCACACCCTGCTTCCCGTaGAGAGAGGGCAGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: AAMARIPRPWCPRKAWRITPCFP*REGRVD
Trigger: GTCTACCCTGCCCTCTCTGCACGGGAAGCAGGGTGT...GATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTTCACGTGTGGCCGGGTaGAGCCACCCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPSRVAG*SHPEPC
Trigger: ACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGA...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAAGTCGGGCCCCTCACTaGCAGGCTCCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPSRAPH*QAPGHQ
Trigger: CTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACT...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGAGGGCCACCTGGGGTaGCAATGCCCCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLEGHLG*QCPTQP
Trigger: TGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTC...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCGAGGGCCACCTGGGGTaGCAATGCCCCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTEGHLG*QCPTQP
Trigger: TGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTC...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGAGTCAGGGAGGGGGTaGCAAGCCGGTAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLESGRG*QAGREA
Trigger: GGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACGAGTCAGGGAGGGGGTaGCAAGCCGGTAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHESGRG*QAGREA
Trigger: GGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAGAGTCAGGGAGGGGGTaGCAAGCCGGTAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPESGRG*QAGREA
Trigger: GGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAAATCCAGCTCATCATTaGCGGGGCCCGCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPNPAHH*RGPRRG
Trigger: GCCCCTCCGCGGGCCCCGCCAATGATGAGCTGGATT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGAATCCAGCTCATCATTaGCGGGGCCCGCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLNPAHH*RGPRRG
Trigger: GCCCCTCCGCGGGCCCCGCCAATGATGAGCTGGATT...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR CCA 90 bp GAGCTGTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACCCGGAGAATCACGTGTaGCCGGGTGCAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ELCVRCSILAWLCWVSLHPENHV*PGAATQ
Trigger: CTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG...GTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCGGAGAATCACGTGTaGCCGGGTGCAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHPENHV*PGAATQ
Trigger: CTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCGGAGAATCACGTGTaGCCGGGTGCAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSPENHV*PGAATQ
Trigger: CTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAGGAGCCTCCGCCTCTaGTTGGGTGCCTCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPRSLRL*LGASCV
Trigger: TACACACGAGGCACCCAACCAGAGGCGGAGGCTCCT...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGGTGGCCCTCACGGGTaGGCAAGGTGTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCGGPHG*ARCAGC
Trigger: ACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLLATRW*PSRVGK
Trigger: CTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAG...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: VGLESQGGGAKPVGKPRIAAPST*PRRHRD
Trigger: ATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGC...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATGTGAGTGCGTGGGCTaGGCCTGTGGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPCECVG*ACGCRE
Trigger: CTCCCTACAACCACAGGCTCAGCCCACGCACTCACA...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTTGTGAGTGCGTGGGCTaGGCCTGTGGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVCECVG*ACGCRE
Trigger: CTCCCTACAACCACAGGCTCAGCCCACGCACTCACA...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCGGTCTAGCATGGTGGTaGGATCCCAGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPGLAWW*DPRKPG
Trigger: GCCTGGCTTTCTGGGATCTCACCACCATGCTAGACC...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTGGGCCTGGAGAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCTATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: VGLESQGGGAKPVGKPRIYKLRG*PRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATA...GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSVAALHRRSLRLWLGASRLKRG*TCLCRA
Trigger: TGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCT...CGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTTCTAGAAGCTTGACCTaGCACACACGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ESGRGCQAGREAQDPLEASRSLT*HTRALC
Trigger: GCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGA...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCACGCCCTACCAAGTaGCACAGCCGAATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIPRPTK*HSRMPE
Trigger: CTCAGGCATTCGGCTGTGGCACTTGGTAGGGCGTGG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCGGGACCAGGAGCTaGCTCCAGCAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHLGTRS*LQQAVG
Trigger: TCCTACTGCCTGCTGGAGGCAGCTCCTGGTCCCGAG...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCACTACCCACTACAGGTaGCCCAGCACCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCTTHYR*PSTSPS
Trigger: GCTCGGGCTGGTGCTGGGGCACCTGTAGTGGGTAGT...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCACTACCCACTACAGGTaGCCCAGCACCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSTTHYR*PSTSPS
Trigger: GCTCGGGCTGGTGCTGGGGCACCTGTAGTGGGTAGT...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCCCTCGACAGGACTTCTaGCTTAGGACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPPRQDF*LRTGWS
Trigger: GCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGG...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCAGTCGGGCCCCTCACTaGCAGGCTCCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSSRAPH*QAPGHQ
Trigger: CTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACT...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTGAGGGCCACCTGGGGTaGCAATGCCCCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAEGHLG*QCPTQP
Trigger: TGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTC...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGCGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRRWDER*MTWQAR
Trigger: CCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCG...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVAAISS*AAQEEP
Trigger: AGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGC...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCAGCTATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCCGGGTGGGCAAGGTGTaGAGGCTGTTGATACCACAG +
Preference number: 4 (lower is better)
Translates to: AAMARIPRPWCPRKAWRIRVGKV*RLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCG...GATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGAAGGTGGGTTCACCATaGCCCAGACGCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TLPENHVWPGAATQSPVQKVGSP*PRRQKV
Trigger: GACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTT...CTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: GASTTPLWSDVRPPAASECEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGRIPRP*CPRKAW
Trigger: CCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCG...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGTGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: PSVAALHRRSLRLWLGASCLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...CGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGCCGGAGAATCACGTGTaGCCGGGTGCAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLPENHV*PGAATQ
Trigger: CTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGCCAAGGCCGGGCTaGTCAAGTTCACACACAGCA +
Preference number: 4 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVGPRPG*SSSHTA
Trigger: TGCTGTGTGTGAACTTGACCAGCCCGGCCTTGGCCC...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAAGGAGCCTCCGCCTCTaGTTGGGTGCCTCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPRSLRL*LGASCV
Trigger: TACACACGAGGCACCCAACCAGAGGCGGAGGCTCCT...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAAGCCCAGGATCCACTaGAGGCTCCAGGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPKPRIH*RLQDSG
Trigger: TCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTT...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACAGGTGGCCCTCACGGGTaGGCAAGGTGTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTGGPHG*ARCAGC
Trigger: ACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACC...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCCACTGGCCACGAGATaGTGGCCCTCACGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRPLATR*WPSRVG
Trigger: GCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGG...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGTAGGGAAGCCCAGGATCCACTGGAGGCTCCAGGACAGTGGAGTCATGGTCTACCACTGGCCACGAGATaGTGGCCCTCACGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GREAQDPLEAPGQWSHGLPLATR*WPSRVG
Trigger: GCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGG...TAGACCATGACTCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTTCCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPLRPVT*AACAQG
Trigger: CCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAA...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCCCAAGGGCACAACGGTaGCCAAACTCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPPRAQR*PNSGLT
Trigger: TGTGAGCCCTGAGTTTGGCCACCGTTGTGCCCTTGG...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCGCCTACTACGGGACTTaGAGCAGAGAGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSAYYGT*SREPRP
Trigger: GGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGC...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIALHHS*RCAASR
Trigger: ACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGC...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPALHHS*RCAASR
Trigger: ACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGC...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTGTGAGTGCGTGGGCTaGGCCTGTGGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTCECVG*ACGCRE
Trigger: CTCCCTACAACCACAGGCTCAGCCCACGCACTCACA...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCTTGGGCTTAGGATCTTaGGGCCTGTCACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPLGLGS*GLSHGQ
Trigger: CTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAA...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CTGGAGGGGAATAGCAGCACAGAGCCCCGGCGGTCACCACACACCAGGAAGTCACTGGGAGCATCTGCATaGCCCATACCACACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LEGNSSTEPRRSPHTRKSLGASA*PIPHPA
Trigger: GGCAGGGTGTGGTATGGGTCATGCAGATGCTCCCAG...TGACTTCCTGGTGTGTGGTGACCGCCGGGGCTCTGTGCTGCTATTCCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420783.7
CDS-3UTR GCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCCCCAGCGCGCCGCGCTaGCCATCAACAGCGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAPSAPR*PSTAPS
Trigger: TGAGGGCGCTGTTGATGGGCAGCGCGGCGCGCTGGG...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCCCAGCGCGCCGCGCTaGCCATCAACAGCGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEPSAPR*PSTAPS
Trigger: TGAGGGCGCTGTTGATGGGCAGCGCGGCGCGCTGGG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR GCA 90 bp GAGCTGTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACGGGTGCACCTGTCTGTaGAGGGCACCTCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ELCVRCSILAWLCWVSLHGCTCL*RAPLAG
Trigger: TCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCC...GTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACACACACGGGCGCTGTaGCCAAAGCAGTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPHTRAL*PKQCPI
Trigger: TATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCAGTGCCACAGCCGAATaGCTGAGTCATCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPISATAE*LSHHPQ
Trigger: CTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACT...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGCATGACCCCTGTATCAGTCACTaGCAGCAGTCGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PENHVWPGAATQSPVQHDPCISH*QQSPRA
Trigger: GGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGG...GTCATGCTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACCCCTGTATCAGTCACTaGCAGCAGTCGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAEISRQATTPPGPDASNPCISH*QQSPRA
Trigger: GGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGG...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCCGCCAGGGCCCGATGCCAGCAACAGGAGCTCCTCATAACCACGCAGGGCCCATTATCCTCTAGCAGCTaGTCCCAGCACTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: PARARCQQQELLITTQGPLSSSS*SQHLTS
Trigger: CGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAA...TGGGCCCTGCGTGGTTATGAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATACGAACGCTTCGGTGGGGTAGGAAGGCACTaGATGTGTGCCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PDPQALAGRPPSRYERFGGVGRH*MCAISA
Trigger: AGCAGAGATGGCACACATGCAGTGCCTTCCTACCCC...ACCGAAGCGTTCGTATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCACACCCTGCTTCCCGTaGAGAGAGGGCAGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTTPCFP*REGRVD
Trigger: GTCTACCCTGCCCTCTCTGCACGGGAAGCAGGGTGT...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPSRSSG*MKLGTP
Trigger: TGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGA...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GATACAGGGCCCCTGTATCAGTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGAGTCGGGCCCCTCACTaGCAGGCTCCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: DTGPLYQSLPAVAKSQPESRAPH*QAPGHQ
Trigger: CTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACT...CTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTAGTCGGGCCCCTCACTaGCAGGCTCCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QEEPPPLVGCLVCKGVDLSRAPH*QAPGHQ
Trigger: CTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACT...AAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTCGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPRWDER*MTWQAR
Trigger: CCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCG...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCCCATCCGATGCCGATTaGGTTGCCGGTCCCAATACT +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPPSDAD*VAGPNT
Trigger: AGTATTGGGACCGGCAACGCAATCGGCATCGGATGG...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PSVAALHRRSLRLWLGASTLTIR*RLRCRS
Trigger: GGACCGGCAACGCAATCGGCATCGGATGGTTAAGGT...CGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTCCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGCCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRPPLVG*LVCKGV
Trigger: CACTCCTTTACACACGAGGCACCCAACCAGAGGCGG...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLAAISS*AAQEEP
Trigger: AGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGC...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPAAISS*AAQEEP
Trigger: AGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACGGGTGGGCAAGGTGTaGAGGCTGTTGATACCACAG +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPRVGKV*RLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIVSIRL*PYPEAM
Trigger: CATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGAC...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCAGCACCTGCCACTATaGTCAGCTCCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIQHLPL*SAPSRR
Trigger: ACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRRIPRP*CPRKAW
Trigger: CCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCG...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCTCTCATGGGCAGCTATaGCCCGGATCCCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSSHGQL*PGSHVP
Trigger: AGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGA...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACCCATCTCTGCTTGCTTaGGGGCAGCAGGTACCGACA +
Preference number: 4 (lower is better)
Translates to: AAEISRQATTPPGPDASNPSLLA*GQQVPT
Trigger: TGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGG...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCGGGCAGGGTAGACACTaGGCCCAACCCAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSGQGRH*AQPSES
Trigger: GCTTTCACTGGGTTGGGCCCAGTGTCTACCCTGCCC...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGGCAGGGTAGACACTaGGCCCAACCCAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPGQGRH*AQPSES
Trigger: GCTTTCACTGGGTTGGGCCCAGTGTCTACCCTGCCC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 4 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVRTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPCLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACAGCTGTGAGTGCGTaGGCTGAGCCTGTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPTAVSA*AEPVVV
Trigger: TACAACCACAGGCTCAGCCCACGCACTCACAGCTGT...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGGGCCAAGGCCGGGCTaGTCAAGTTCACACACAGCA +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCGPRPG*SSSHTA
Trigger: TGCTGTGTGTGAACTTGACCAGCCCGGCCTTGGCCC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCGGGCCAAGGCCGGGCTaGTCAAGTTCACACACAGCA +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTGPRPG*SSSHTA
Trigger: TGCTGTGTGTGAACTTGACCAGCCCGGCCTTGGCCC...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTAGGAGCCTCCGCCTCTaGTTGGGTGCCTCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPRSLRL*LGASCV
Trigger: TACACACGAGGCACCCAACCAGAGGCGGAGGCTCCT...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: TLPENHVWPGAATQSPVQEAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...CTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGCTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GASTTPLWSDVRPPAASELATRW*PSRVGK
Trigger: CTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAG...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGCATCTTCACTGCCACTaGCCACGAGATGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRHLHCH*PRDGGP
Trigger: AGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATG...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCSSTRS*GTSPAS
Trigger: AGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGA...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCCGACCCTCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CHTRALCPKQCPIFCTRPSSTRS*GTSPAS
Trigger: AGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGA...GGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLSSTRS*GTSPAS
Trigger: AGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTGCCCACATGCCCACTaGTTCGTCGGTCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTCPHAH*FVGQVL
Trigger: TAGCACCTGACCGACGAATCAGTGGGCATGTGGGCA...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPNASVF*SCSQQS
Trigger: GGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTT...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAAATTCTCTAGAAGCTTaGCCTGCCACACACGGGCGC +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPNSLEA*PATHGR
Trigger: GCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAATT...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGCCAGAGTCACAGCCTTaGGTGTACCTGGCCTACTAC +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRPESQP*VYLAYY
Trigger: GTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGG...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACACCATGGCATGTGACTaGGGTCACACCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHTMACD*GHTLLP
Trigger: GGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGT...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCAGCCACCATGGCATGTaGCTGAGGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLSHHGM*LRSHPA
Trigger: AGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCAGCCACCATGGCATGTaGCTGAGGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSSHHGM*LRSHPA
Trigger: AGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCT...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCALHHS*RCAASR
Trigger: ACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCGGTCATCAGGCTGCATaGAGCTGGGCACTCCATATT +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPGHQAA*SWALHI
Trigger: AATATGGAGTGCCCAGCTTCATGCAGCCTGATGACC...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGAGTGTTGATGGGGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: HLPRKQGLVHSSSWSVDGGTKGA*HGRRGG
Trigger: GCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCC...CCCATCAACACTCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCGGTCTAGCATGGTGGTaGGATCCCAGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLGLAWW*DPRKPG
Trigger: GCCTGGCTTTCTGGGATCTCACCACCATGCTAGACC...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCAGGTGTGCAGGCTGTTaGTACCACAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLRCAGC*YHSCGP
Trigger: AGGCCCACAGCTGTGGTATCAACAGCCTGCACACCT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIQKVSR*SMEAET
Trigger: GGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: QRVRLRSLGKLLPRQGPMQKVSR*SMEAET
Trigger: GGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTG...CATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPWVSLH*ATFKAT
Trigger: TGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCA...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGTCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GASTTPLWSDVRPPAASESACSF*ELCVRC
Trigger: GCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGA...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCTACACATCCTGGGGGTaGGCACACAGCAAAATGGGG +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIYTSWG*AHSKMG
Trigger: CCCCATTTTGCTGTGTGCTCACCCCCAGGATGTGTA...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTCAACTCGGAGTCCCTTaGTTCCAAACACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: ESGRGCQAGREAQDPLEAQLGVP*FQTQPP
Trigger: TGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTG...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTGGAGGGGAATAGCAGCACAGAGCCCCGGCGGTCACCACACACCAGGAAGTCAAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LEGNSSTEPRRSPHTRKSRLKRG*TCLCRA
Trigger: TGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCT...TGACTTCCTGGTGTGTGGTGACCGCCGGGGCTCTGTGCTGCTATTCCCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTQCPIF*TRPPGT
Trigger: AGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCACACACGGGCGCTGTaGCCAAAGCAGTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSHTRAL*PKQCPI
Trigger: TATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTG...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCCGACCCTCTAGAAGCTTGACCTaGCACACACGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CHTRALCPKQCPIFCTRPSRSLT*HTRALC
Trigger: GCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGA...GGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCTCTAGAAGCTTGACCTaGCACACACGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLSRSLT*HTRALC
Trigger: GCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGA...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCTCTAGAAGCTTGACCTaGCACACACGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSSRSLT*HTRALC
Trigger: GCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGA...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCCACGCCCTACCAAGTaGCACAGCCGAATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAPRPTK*HSRMPE
Trigger: CTCAGGCATTCGGCTGTGGCACTTGGTAGGGCGTGG...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGTTATCCTCTAGCAGCTaGTCCCAGCACTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: TLPENHVWPGAATQSPVQLSSSS*SQHLTS
Trigger: CGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAA...CTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCCCCGCCAGGGCCCGATaGCAGCAACAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAPARAR*QQQELL
Trigger: GAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAAATGCCCACGAACGGTaGCCTCCACCACAGTTGACG +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPNAHER*PPPQLT
Trigger: CGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCAATGCCCACGAACGGTaGCCTCCACCACAGTTGACG +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCNAHER*PPPQLT
Trigger: CGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATT...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGTCACGTGTGGCCGGGTaGAGCCACCCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLSRVAG*SHPEPC
Trigger: ACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGA...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPISRSSG*MKLGTP
Trigger: TGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGA...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCATCCGATGCCGATTaGGTTGCCGGTCCCAATACT +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIPSDAD*VAGPNT
Trigger: AGTATTGGGACCGGCAACGCAATCGGCATCGGATGG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGCCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCCCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: STHLQLLHRHQEPTATTSPPLVG*LVCKGV
Trigger: CACTCCTTTACACACGAGGCACCCAACCAGAGGCGG...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCACCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPPPLVG*LVCKGV
Trigger: CACTCCTTTACACACGAGGCACCCAACCAGAGGCGG...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAGAGTCAGGGAGGGGGTaGCAAGCCGGTAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGESGRG*QAGREA
Trigger: GGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCGGGTGGGCAAGGTGTaGAGGCTGTTGATACCACAG +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLRVGKV*RLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCG...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGGGGATCCATCTTCACTaGCACTGGCCACGAGATGGT +
Preference number: 4 (lower is better)
Translates to: QRVRLRSLGKLLPRQGPMGIHLH*HWPRDG
Trigger: ACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCC...CATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAAAGGTGGGTTCACCATaGCCCAGACGCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPKVGSP*PRRQKV
Trigger: GACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCVSIRL*PYPEAM
Trigger: CATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGAC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLVSIRL*PYPEAM
Trigger: CATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGAC...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GAGCTGTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACCAGCACCTGCCACTATaGTCAGCTCCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: ELCVRCSILAWLCWVSLHQHLPL*SAPSRR
Trigger: ACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTG...GTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGTGCGTGGGCTGAGCCTGTGGTTGTAGGGAGTGCTAGGACACAGACAGTAGTGCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAWAEPVVVGSARTQTVVRIPRP*CPRKAW
Trigger: CCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCG...CACTACTGTCTGTGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCAGGAAACAGGGTCTaGTCCACAGCAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIPGNRV*STAAVG
Trigger: TCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGCCAGGAAACAGGGTCTaGTCCACAGCAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRPGNRV*STAAVG
Trigger: TCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGG...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCRTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTTGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPCLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTAGGTAAGCAAAGGCCATaGCCGCCTCAGTATCAGAGA +
Preference number: 4 (lower is better)
Translates to: QTLPENHVWPGAATQSPVGKQRP*PPQYQR
Trigger: TCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACC...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSREAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAGGTGGCCCTCACGGGTaGGCAAGGTGTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGGGPHG*ARCAGC
Trigger: ACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACC...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCACATCTTCACTGCCACTaGCCACGAGATGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPHLHCH*PRDGGP
Trigger: AGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATG...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCATCTTCACTGCCACTaGCCACGAGATGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLHLHCH*PRDGGP
Trigger: AGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATG...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCATCTTCACTGCCACTaGCCACGAGATGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTHLHCH*PRDGGP
Trigger: AGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATCTTCACTGCCACTaGCCACGAGATGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLHLHCH*PRDGGP
Trigger: AGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATG...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPLRPVT*AACAQG
Trigger: CCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAA...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTLRPVT*AACAQG
Trigger: CCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAA...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCTGCTCCATACTGGCCTaGCTATGCTGGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSCSILA*LCWVSL
Trigger: GAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCA...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCCATACTGGCCTaGCTATGCTGGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPCSILA*LCWVSL
Trigger: GAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCA...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPNASVF*SCSQQS
Trigger: GGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTT...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLAAPST*PRRHRD
Trigger: ATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGC...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGAGCCACCATGGCATGTaGCTGAGGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLSHHGM*LRSHPA
Trigger: AGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCT...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGALHHS*RCAASR
Trigger: ACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGC...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACACGCTTTACACAAGTaGTCTCACGGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPHALHK*SHGHAD
Trigger: GTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCGGTCATCAGGCTGCATaGAGCTGGGCACTCCATATT +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIGHQAA*SWALHI
Trigger: AATATGGAGTGCCCAGCTTCATGCAGCCTGATGACC...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGTGTGAGTGCGTGGGCTaGGCCTGTGGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWCECVG*ACGCRE
Trigger: CTCCCTACAACCACAGGCTCAGCCCACGCACTCACA...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTGGTTACAAACAGCTGTaGGTGCGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAGYKQL*VRGLSL
Trigger: CAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACC...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SRTVESWSSMVVRSQKARGTKGA*HGRRGG
Trigger: GCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCC...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACAGGAGCTCCTCATAACCACGCAGGGCCCAGCTCAAGCTGTGCACCTTCCCAGGGTCTAGCATGGTGGTaGGATCCCAGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGAPHNHAGPSSSCAPSQGLAWW*DPRKPG
Trigger: GCCTGGCTTTCTGGGATCTCACCACCATGCTAGACC...CTGGGAAGGTGCACAGCTTGAGCTGGGCCCTGCGTGGTTATGAGGAGCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGAGGTGTGCAGGCTGTTaGTACCACAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGRCAGC*YHSCGP
Trigger: AGGCCCACAGCTGTGGTATCAACAGCCTGCACACCT...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACAAGGTGTGCAGGCTGTTaGTACCACAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTRCAGC*YHSCGP
Trigger: AGGCCCACAGCTGTGGTATCAACAGCCTGCACACCT...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTTTGGGCTTAGGATCTTaGGGCCTGTCACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPLGLGS*GLSHGQ
Trigger: CTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAA...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: STHLQLLHRHQEPTATTSYKLRG*PRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATA...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPYKLRG*PRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATA...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACGTGCAGGGCACCTCTTaGAGGATGCACCCTACTACA +
Preference number: 4 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHVQGTS*RMHPTT
Trigger: TGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCAC...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHARLKRG*TCLCRA
Trigger: TGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCT...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCGATTCGTCGGTCAGGTaGTACAGGTTTGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPDSSVR*YRFVVC
Trigger: GCAGACAACAAACCTGTAGCACCTGACCGACGAATC...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAAGATGATGCCCACATaGCCACTGATTCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPKMMPT*PLIRRS
Trigger: TGACCGACGAATCAGTGGGCATGTGGGCATCATCTT...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPLCPKQ*PIFCTR
Trigger: TCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATTATCCTCTAGCAGCTaGTCCCAGCACTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPLSSSS*SQHLTS
Trigger: CGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAA...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGTTATCCTCTAGCAGCTaGTCCCAGCACTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRLSSSS*SQHLTS
Trigger: CGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAA...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGGGTAGGAAGGCACTaGATGTGTGCCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPGVGRH*MCAISA
Trigger: AGCAGAGATGGCACACATGCAGTGCCTTCCTACCCC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTGCCAGCAGTCGCCAAGACTACCCACTACAGGTaGCCCAGCACCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: RRHRDTGPLYQSLPAVAKTTHYR*PSTSPS
Trigger: GCTCGGGCTGGTGCTGGGGCACCTGTAGTGGGTAGT...CTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIPQLTM*SFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGG...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCLSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLLSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GTEYSSSTRSWGTSPASPLSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...GGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHSRSSG*MKLGTP
Trigger: TGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGA...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCSRSSG*MKLGTP
Trigger: TGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGA...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGGTCATCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGAGGGCCACCTGGGGTaGCAATGCCCCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: RSSGCMKLGTPYSGPRVMEGHLG*QCPTQP
Trigger: TGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTC...CATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACGATGCCGATTGCGTTaGCGGTCCCAATACTCATCT +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPRCRLR*RSQYSS
Trigger: AGATGAGTATTGGGACCGGCAACGCAATCGGCATCG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCCGACCCCCATCCGATGCCGATTaGGTTGCCGGTCCCAATACT +
Preference number: 4 (lower is better)
Translates to: CHTRALCPKQCPIFCTRPPSDAD*VAGPNT
Trigger: AGTATTGGGACCGGCAACGCAATCGGCATCGGATGG...GGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPTLTIR*RLRCRS
Trigger: GGACCGGCAACGCAATCGGCATCGGATGGTTAAGGT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLTLTIR*RLRCRS
Trigger: GGACCGGCAACGCAATCGGCATCGGATGGTTAAGGT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPVSARS*RIRPES
Trigger: GGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGGGATCCATCTTCACTaGCACTGGCCACGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCGIHLH*HWPRDG
Trigger: ACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCGGGATCCATCTTCACTaGCACTGGCCACGAGATGGT +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLGIHLH*HWPRDG
Trigger: ACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCC...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTAAGGTGGGTTCACCATaGCCCAGACGCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAKVGSP*PRRQKV
Trigger: GACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTT...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGAAGGTGGGTTCACCATaGCCCAGACGCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGKVGSP*PRRQKV
Trigger: GACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTT...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLLQTRH*EEYKLR
Trigger: TCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAG...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCTCACCTCAAACACAGCCACCATaGCCTCCAAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: MARIPRPWCPRKAWRISPQTQPP*PPSQGL
Trigger: GAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTG...AGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATA +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPSTTEL*PRAKAI
Trigger: TATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCT...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTCAGCACCTGCCACTATaGTCAGCTCCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: QEEPPPLVGCLVCKGVDLQHLPL*SAPSRR
Trigger: ACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTG...AAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAGGATCTCACCTTCATaGCTCCACACCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPRISPS*LHTKQT
Trigger: TGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCT...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGCAGGCCTGCCTCTCATaGGCAGCTATGGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLQACLS*AAMARI
Trigger: GATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTG...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHARTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGGGTAAGCAAAGGCCATaGCCGCCTCAGTATCAGAGA +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRGKQRP*PPQYQR
Trigger: TCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACC...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCCCGGAGAATCACGTGTaGCCGGGTGCAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAPENHV*PGAATQ
Trigger: CTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGACAGCTGTGAGTGCGTaGGCTGAGCCTGTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLTAVSA*AEPVVV
Trigger: TACAACCACAGGCTCAGCCCACGCACTCACAGCTGT...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGTGCCCGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SGCMKLGTPYSGPRVMVPERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...GGGCACCATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCCATGTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPHVPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTACATG...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGGGGCCAAGGCCGGGCTaGTCAAGTTCACACACAGCA +
Preference number: 4 (lower is better)
Translates to: GASTTPLWSDVRPPAASEGPRPG*SSSHTA
Trigger: TGCTGTGTGTGAACTTGACCAGCCCGGCCTTGGCCC...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTAGGAGCCTCCGCCTCTaGTTGGGTGCCTCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VTASSRQEPARVTALSVPRSLRL*LGASCV
Trigger: TACACACGAGGCACCCAACCAGAGGCGGAGGCTCCT...AGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPEAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CGGTCAGGTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCGGTGGCCCTCACGGGTaGGCAAGGTGTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSGATGLLSAKAVAGYQTGGPHG*ARCAGC
Trigger: ACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACC...GGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHALRPVT*AACAQG
Trigger: CCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAA...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAGAGCACACAGCAAAATaGGGTGGGACGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPEHTAK*GGTCRE
Trigger: CTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTC...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCATCTTAGAAAATCCTTaGTCTCGGCCGGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIILENP*SRPGAV
Trigger: CACCGCACCCGGCCGAGACCAAGGATTTTCTAAGAT...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACATGGAGCCTGCAAGCCTaGGAGCATCTGCATGACCCA +
Preference number: 4 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTWSLQA*EHLHDP
Trigger: TGGGTCATGCAGATGCTCCCAGGCTTGCAGGCTCCA...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CAA 72 bp GTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTaGAAGCAGAGAGCCGAGACCCCCAATCCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: VTALSVPGLLRD*KQRAETPNPRY
Trigger: GTACCGGGGATTGGGGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp GCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTACGGGACTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ASSRQEPARVTA*SVPGLLRDLKQ
Trigger: CTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp TGCTTGCTTGGGGGCAGCAGGTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLLGGSRYRQRS*TKMALPEGAAE
Trigger: CTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp GGGGGTAGGAAGGCACTGCATGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTACCGACAACGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGRKALHVCHLC*LGGSRYRQRSL
Trigger: CAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATGCAGTGCCTTCCTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: STHLQLLHRHQEPTATTSNASVF*SCSQQS
Trigger: GGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTT...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGAATTCTCTAGAAGCTTaGCCTGCCACACACGGGCGC +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLNSLEA*PATHGR
Trigger: GCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAATT...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTAATTCTCTAGAAGCTTaGCCTGCCACACACGGGCGC +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHANSLEA*PATHGR
Trigger: GCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAATT...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTGCCTACTACGGGACTTaGAGCAGAGAGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAAYYGT*SREPRP
Trigger: GGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGC...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAATCCGAAGCCCGCCTACTACGGGACTTaGAGCAGAGAGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: GTTLTRPSPLAIAHNPKPAYYGT*SREPRP
Trigger: GGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGC...GGGCTTCGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACAGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTAAPST*PRRHRD
Trigger: ATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGC...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCACCGACAACGTTCCTTaGCAAAGATGGCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCTDNVP*QRWPCQ
Trigger: CTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGT...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCACGCTTTACACAAGTaGTCTCACGGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTHALHK*SHGHAD
Trigger: GTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCACACGCTTTACACAAGTaGTCTCACGGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPHALHK*SHGHAD
Trigger: GTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTG...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGGTCATCAGGCTGCATaGAGCTGGGCACTCCATATT +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCGHQAA*SWALHI
Trigger: AATATGGAGTGCCCAGCTTCATGCAGCCTGATGACC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTAGGTTACAAACAGCTGTaGGTGCGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVGYKQL*VRGLSL
Trigger: CAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACC...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGAGGTGTGCAGGCTGTTaGTACCACAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRRCAGC*YHSCGP
Trigger: AGGCCCACAGCTGTGGTATCAACAGCCTGCACACCT...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGTTGGGCTTAGGATCTTaGGGCCTGTCACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLLGLGS*GLSHGQ
Trigger: CTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAA...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCTGGAGGCTGAGACCATaGTGCTTGGGCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSWRLRP*CLGLGS
Trigger: AGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCA...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGGAGGCTGAGACCATaGTGCTTGGGCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPWRLRP*CLGLGS
Trigger: AGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCA...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCTGGAGGCTGAGACCATaGTGCTTGGGCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: GTEYSSSTRSWGTSPASPWRLRP*CLGLGS
Trigger: AGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCA...GGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTGGAGGCTGAGACCATaGTGCTTGGGCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLWRLRP*CLGLGS
Trigger: AGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCACACAGTGCTATTCATaGAGGTGGGTTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPITQCYS*RWVHHA
Trigger: GGCATGGTGAACCCACCTTCATGAATAGCACTGTGT...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACACACAGTGCTATTCATaGAGGTGGGTTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: AAEISRQATTPPGPDASNTQCYS*RWVHHA
Trigger: GGCATGGTGAACCCACCTTCATGAATAGCACTGTGT...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATACGAACGCTTCGGTTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PDPQALAGRPPSRYERFGFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...ACCGAAGCGTTCGTATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCTGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCTCCCTCAAGCCAGCGTaGATCCCAAATCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSSLKPA*IPNPVR
Trigger: TCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGA...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TTGACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LTCHTRALCPKQCPIFCTQCPIF*TRPPGT
Trigger: AGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTG...GGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLLCPKQ*PIFCTR
Trigger: TCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAG...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTCAAGCTGTGCACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGCACACACGGGCGCTGTaGCCAAAGCAGTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: AQAVHLPRKQGLVHSSSWHTRAL*PKQCPI
Trigger: TATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTG...CCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTGCACAGCTTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CGGCTTGGGGTGCTGGGGTCCGGAGTAACCATGATGCTGAAGCAGTGCATCTCAGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: RLGVLGSGVTMMLKQCISVITQA*LSWAAM
Trigger: CATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCAC...TGAGATGCACTGCTTCAGCATCATGGTTACTCCGGACCCCAGCACCCCAAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTAGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVVITQA*LSWAAM
Trigger: CATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCAC...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGTGCCCAGTGCCACAGCCGAATaGCTGAGTCATCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGCMKLGTPYSGPRVMVPSATAE*LSHHPQ
Trigger: CTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACT...GGGCACCATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGTGCCCGCCCAGCTCAAGCTGTaGACCTTCCCAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: SGCMKLGTPYSGPRVMVPAQLKL*TFPGNR
Trigger: CCTGTTTCCTGGGAAGGTGCACAGCTTGAGCTGGGC...GGGCACCATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTATGTGCCATCTCTGCTTaGTTGGGGGCAGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVCAISA*LGAAGT
Trigger: GGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACA...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAACACCCTGCTTCCCGTaGAGAGAGGGCAGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGTPCFP*REGRVD
Trigger: GTCTACCCTGCCCTCTCTGCACGGGAAGCAGGGTGT...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCCCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: GTEYSSSTRSWGTSPASPPQLTM*SFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGG...GGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHALSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCCGATGCCGATTGCGTTaGCGGTCCCAATACTCATCT +
Preference number: 4 (lower is better)
Translates to: STHLQLLHRHQEPTATTSRCRLR*RSQYSS
Trigger: AGATGAGTATTGGGACCGGCAACGCAATCGGCATCG...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCCGATGCCGATTGCGTTaGCGGTCCCAATACTCATCT +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCRCRLR*RSQYSS
Trigger: AGATGAGTATTGGGACCGGCAACGCAATCGGCATCG...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLVSARS*RIRPES
Trigger: GGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAAAISS*AAQEEP
Trigger: AGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGC...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTGAGTCAGGGAGGGGGTaGCAAGCCGGTAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LTKMALPEGAAEISRQATESGRG*QAGREA
Trigger: GGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC...AGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGCGGGTGGGCAAGGTGTaGAGGCTGTTGATACCACAG +
Preference number: 4 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWRVGKV*RLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCG...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCACATGGGCAGCATGTaGACAGGGGACAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLHMGSM*TGDRVF
Trigger: GAATACTCTGTCCCCTGTGCACATGCTGCCCATGTG...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CATGTCAGAGCTAGGTACCTAACTCTGATGACCCACAGGGAAGAGATGGGGATCTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: HVRARYLTLMTHREEMGICEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...GATCCCCATCTCTTCCCTGTGGGTCATCAGAGTTAGGTACCTAGCTCTGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR GCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACAAAGCCTGGGAGCATCTaGATGACCCATACCACACCC +
Preference number: 4 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTKPGSI*MTHTTP
Trigger: GGGTGTGGTATGGGTCATGCAGATGCTCCCAGGCTT...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
CDS-3UTR CCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATA +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLSTTEL*PRAKAI
Trigger: TATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCT...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CGGCTTGGGGTGCTGGGGTCCGGAGTAACCATGATGCTGAAGCAGTGCATCTCACAGCACCTGCCACTATaGTCAGCTCCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: RLGVLGSGVTMMLKQCISQHLPL*SAPSRR
Trigger: ACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTG...TGAGATGCACTGCTTCAGCATCATGGTTACTCCGGACCCCAGCACCCCAAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLYQTKS*LETAPA
Trigger: GGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTCATGGGCAGCTATaGCCCGGATCCCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAASHGQL*PGSHVP
Trigger: AGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGA...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCCAGGCCTGCCTCTCATaGGCAGCTATGGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: QSHSLECTWPTTGLEAESQACLS*AAMARI
Trigger: GATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTG...GCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCCAGGCCTGCCTCTCATaGGCAGCTATGGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLQACLS*AAMARI
Trigger: GATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTG...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRSLECT*PTTGLE
Trigger: TTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCT...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCGTCCACAGCAGCAGTTaGAGTGTTGATGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTVHSSS*SVDGDN
Trigger: GTTGTCCCCATCAACACTCCAACTGCTGCTGTGGAC...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGCCAGGAAACAGGGTCTaGTCCACAGCAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGPGNRV*STAAVG
Trigger: TCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGG...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCCCATCTCTGCTTGCTTaGGGGCAGCAGGTACCGACA +
Preference number: 4 (lower is better)
Translates to: RLWLGASCVKEWTLRTHRPSLLA*GQQVPT
Trigger: TGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGG...GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGTAAGCAAAGGCCATaGCCGCCTCAGTATCAGAGA +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPGKQRP*PPQYQR
Trigger: TCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGGTAAGCAAAGGCCATaGCCGCCTCAGTATCAGAGA +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLGKQRP*PPQYQR
Trigger: TCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACC...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTAACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QTLPENHVWPGAATQSPVTHRLW*KVSARS
Trigger: GCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ESGRGCQAGREAQDPLEATHRLW*KVSARS
Trigger: GCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PSVAALHRRSLRLWLGASRTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...CGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGCCAGGCTGCCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGC +
Preference number: 4 (lower is better)
Translates to: SQAAISSCAAQEEPPPLVSCVKE*TLRTHR
Trigger: GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGA...AACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAEAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGGGTGGCCCTCACGGGTaGGCAAGGTGTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMGGPHG*ARCAGC
Trigger: ACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACC...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACACTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTLATRW*PSRVGK
Trigger: CTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAG...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGACTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGLATRW*PSRVGK
Trigger: CTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAG...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRLRPVT*AACAQG
Trigger: CCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAA...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCGCCACATCAGGCACATaGAACACAGTGCTATTCATG +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPATSGT*NTVLFM
Trigger: CATGAATAGCACTGTGTTCCATGTGCCTGATGTGGC...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTT +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRSRAYS*QHSTHL
Trigger: AAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACT...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTCGACCACACCTCTTTaGTCAGATGTTCGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLSTTPL*SDVRPP
Trigger: AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGTGCCCACATGCCCACTaGTTCGTCGGTCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLCPHAH*FVGQVL
Trigger: TAGCACCTGACCGACGAATCAGTGGGCATGTGGGCA...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGGCCTACTACGGGACTTaGAGCAGAGAGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: SRTVESWSSMVVRSQKARAYYGT*SREPRP
Trigger: GGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGC...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATGGCTCCACACCAAGCAGACCAGAGTCACAGCCTTaGGTGTACCTGGCCTACTAC +
Preference number: 4 (lower is better)
Translates to: GVPERPGGSHLHGSTPSRPESQP*VYLAYY
Trigger: GTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGG...TCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTACCGACAACGTTCCTTaGCAAAGATGGCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHATDNVP*QRWPCQ
Trigger: CTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGT...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGACCGACAACGTTCCTTaGCAAAGATGGCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGTDNVP*QRWPCQ
Trigger: CTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGT...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCAGAGCGCACCATGGCATGTGACTaGGGTCACACCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSQRASQIQSDMFHRPERTMACD*GHTLLP
Trigger: GGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGT...GCGCTCTGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGACCATGGCATGTGACTaGGGTCACACCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLTMACD*GHTLLP
Trigger: GGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGT...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTTGATCAATGGAGGCTaGGACCATGATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: STHLQLLHRHQEPTATTSLINGG*DHDAWA
Trigger: AGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAA...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTTGATCAATGGAGGCTaGGACCATGATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCLINGG*DHDAWA
Trigger: AGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAA...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCACACAGTGCTATTCATaGAGGTGGGTTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSTQCYS*RWVHHA
Trigger: GGCATGGTGAACCCACCTTCATGAATAGCACTGTGT...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACACACAGTGCTATTCATaGAGGTGGGTTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHTQCYS*RWVHHA
Trigger: GGCATGGTGAACCCACCTTCATGAATAGCACTGTGT...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCACACAGTGCTATTCATaGAGGTGGGTTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: STHLQLLHRHQEPTATTSTQCYS*RWVHHA
Trigger: GGCATGGTGAACCCACCTTCATGAATAGCACTGTGT...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGTGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRWVSLH*ATFKAT
Trigger: TGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCA...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMSACSF*ELCVRC
Trigger: GCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGA...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACACCCTCACGTGACGCTTaGGGGGCGCTCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTPSRDA*GALPAA
Trigger: GGCAGCTGGGAGCGCCCCGCAAGCGTCACGTGAGGG...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395474.7
CDS-3UTR GCA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGTATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: GASTTPLWSDVRPPAASEYKLRG*PRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATA...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACAGGAGCTCCTCATAACCACGCAGGGCCCAGCTCAAGCTGTGCACCTTCCCAGTGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 4 (lower is better)
Translates to: TGAPHNHAGPSSSCAPSQWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...CTGGGAAGGTGCACAGCTTGAGCTGGGCCCTGCGTGGTTATGAGGAGCTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGTCCCTCAAGCCAGCGTaGATCCCAAATCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLSLKPA*IPNPVR
Trigger: TCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGA...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGATTCGTCGGTCAGGTaGTACAGGTTTGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPDSSVR*YRFVVC
Trigger: GCAGACAACAAACCTGTAGCACCTGACCGACGAATC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAGATTCGTCGGTCAGGTaGTACAGGTTTGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPDSSVR*YRFVVC
Trigger: GCAGACAACAAACCTGTAGCACCTGACCGACGAATC...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAAAGATGATGCCCACATaGCCACTGATTCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPKMMPT*PLIRRS
Trigger: TGACCGACGAATCAGTGGGCATGTGGGCATCATCTT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGGTCATCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGCCACGCCCTACCAAGTaGCACAGCCGAATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSSGCMKLGTPYSGPRVMPRPTK*HSRMPE
Trigger: CTCAGGCATTCGGCTGTGGCACTTGGTAGGGCGTGG...CATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCCACGCCCTACCAAGTaGCACAGCCGAATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEPRPTK*HSRMPE
Trigger: CTCAGGCATTCGGCTGTGGCACTTGGTAGGGCGTGG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCACTCGGGACCAGGAGCTaGCTCCAGCAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VSTQQNGVGRAERYRVKALGTRS*LQQAVG
Trigger: TCCTACTGCCTGCTGGAGGCAGCTCCTGGTCCCGAG...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ATCCTTGAGGTAAGCAAAGGCCATGGCCGCCTCAGTATCAGAGAATGCCCACGAACTACCCACTACAGGTaGCCCAGCACCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: ILEVSKGHGRLSIRECPRTTHYR*PSTSPS
Trigger: GCTCGGGCTGGTGCTGGGGCACCTGTAGTGGGTAGT...TCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACCTCAAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp AGTGCGTGGGCTGAGCCTGTGGTTGTAGGGAGTGCTAGGACACAGACAGTAGTGAATGCCCACGAACGGTaGCCTCCACCACAGTTGACG +
Preference number: 4 (lower is better)
Translates to: SAWAEPVVVGSARTQTVVNAHER*PPPQLT
Trigger: CGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATT...CACTACTGTCTGTGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTAATGCCCACGAACGGTaGCCTCCACCACAGTTGACG +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAANAHER*PPPQLT
Trigger: CGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATT...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GTGTTGATGGGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAATTCACGTGTGGCCGGGTaGAGCCACCCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLMGTTLTRPSPLAIAHNSRVAG*SHPEPC
Trigger: ACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGA...ATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TTGACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LTCHTRALCPKQCPIFCTSRSSG*MKLGTP
Trigger: TGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGA...GGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CGGTCAGGTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCCGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RSGATGLLSAKAVAGYQTRWDER*MTWQAR
Trigger: CCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCG...GGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCTGGTAGTAGGCTCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AGSRLHHALWYTHSHHGMAAISS*AAQEEP
Trigger: AGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGC...CATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGAGCCTACTACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TTGACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCGGGATCCATCTTCACTaGCACTGGCCACGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LTCHTRALCPKQCPIFCTGIHLH*HWPRDG
Trigger: ACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCC...GGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CACGAGATGGTGGCCCTCACGGGTGGGCAAGGTGTGCAGGCTGTTGATACCACACACATGGGCAGCATGTaGACAGGGGACAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: HEMVALTGGQGVQAVDTTHMGSM*TGDRVF
Trigger: GAATACTCTGTCCCCTGTGCACATGCTGCCCATGTG...TGTGGTATCAACAGCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGCAAACACAGCCACCATaGCCTCCAAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLQTQPP*PPSQGL
Trigger: GAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTG...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPRPRAG*KQHLPL
Trigger: TAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCAGGATCTCACCTTCATaGCTCCACACCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCRISPS*LHTKQT
Trigger: TGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCT...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGTGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GASTTPLWSDVRPPAASECPRKA*RISPSW
Trigger: CCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACA...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCTCAAGCTGTGCACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGTGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: AQAVHLPRKQGLVHSSSWCPRKA*RISPSW
Trigger: CCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACA...CCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTGCACAGCTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCTCATGGGCAGCTATaGCCCGGATCCCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSSHGQL*PGSHVP
Trigger: AGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGA...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGGTCCACAGCAGCAGTTaGAGTGTTGATGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGVHSSS*SVDGDN
Trigger: GTTGTCCCCATCAACACTCCAACTGCTGCTGTGGAC...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TTGACCTGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCACAGCTGTGAGTGCGTaGGCTGAGCCTGTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LTCHTRALCPKQCPIFCTTAVSA*AEPVVV
Trigger: TACAACCACAGGCTCAGCCCACGCACTCACAGCTGT...GGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCAGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCTACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 4 (lower is better)
Translates to: GTEYSSSTRSWGTSPASPYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...GGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCTACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATCATGTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 4 (lower is better)
Translates to: PGSHVPGVPERPGGSHLHHVPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTACATG...ATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CCA 90 bp CTTGACCTCGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTGCCAGCAGGGGCCAAGGCCGGGCTaGTCAAGTTCACACACAGCA +
Preference number: 4 (lower is better)
Translates to: LDLDVIEIQGPCISHCQQGPRPG*SSSHTA
Trigger: TGCTGTGTGTGAACTTGACCAGCCCGGCCTTGGCCC...CTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGC +
Preference number: 4 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSSCVKE*TLRTHR
Trigger: GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGA...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGC +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPSCVKE*TLRTHR
Trigger: GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGA...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLSCVKE*TLRTHR
Trigger: GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCAGGAGCCTCCGCCTCTaGTTGGGTGCCTCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSARSLRL*LGASCV
Trigger: TACACACGAGGCACCCAACCAGAGGCGGAGGCTCCT...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTTGACCTCGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTGCCAGCAGAGGAGCCTCCGCCTCTaGTTGGGTGCCTCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LDLDVIEIQGPCISHCQQRSLRL*LGASCV
Trigger: TACACACGAGGCACCCAACCAGAGGCGGAGGCTCCT...CTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGAAGGAGCCTCCGCCTCTaGTTGGGTGCCTCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRRSLRL*LGASCV
Trigger: TACACACGAGGCACCCAACCAGAGGCGGAGGCTCCT...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCAGGACAGTGGAGTCATaGTCTAGCATGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCRTVES*SSMVVR
Trigger: TCTCACCACCATGCTAGACCATGACTCCACTGTCCT...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTGGAGGGGAATAGCAGCACAGAGCCCCGGCGGTCACCACACACCAGGAAGTCAAGGACAGTGGAGTCATaGTCTAGCATGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LEGNSSTEPRRSPHTRKSRTVES*SSMVVR
Trigger: TCTCACCACCATGCTAGACCATGACTCCACTGTCCT...TGACTTCCTGGTGTGTGGTGACCGCCGGGGCTCTGTGCTGCTATTCCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCAGGACAGTGGAGTCATaGTCTAGCATGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLRTVES*SSMVVR
Trigger: TCTCACCACCATGCTAGACCATGACTCCACTGTCCT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTAAGCCCAGGATCCACTaGAGGCTCCAGGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAKPRIH*RLQDSG
Trigger: TCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTT...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CAGGTTCTGCACTCGCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QVLHSLYHPQMPTKVQAVLATRW*PSRVGK
Trigger: CTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAG...TACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGCGAGTGCAGAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRSSTRS*GTSPAS
Trigger: AGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGA...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAATCCGAAGCCCTTGAGGCCTGTCACATaGGCAGCATGTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GTTLTRPSPLAIAHNPKPLRPVT*AACAQG
Trigger: CCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAA...GGGCTTCGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTCCAAGGGCACAACGGTaGCCAAACTCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAPRAQR*PNSGLT
Trigger: TGTGAGCCCTGAGTTTGGCCACCGTTGTGCCCTTGG...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGCCAAGGGCACAACGGTaGCCAAACTCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLPRAQR*PNSGLT
Trigger: TGTGAGCCCTGAGTTTGGCCACCGTTGTGCCCTTGG...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTT +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPSSVLS*GVGHIL
Trigger: AAGAATATGCCCGACTCCCCATGACAAGACAGAACT...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCACAGCAAAATGGGGTaGGACGTGCAGAGAGGTATA +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLHSKMG*DVQRGI
Trigger: TATACCTCTCTGCACGTCCCACCCCATTTTGCTGTG...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGACAAGAGCAAAGAGATaGGCCAGTGACTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRTRAKR*ASDSVS
Trigger: AGAGACTGAGTCACTGGCCCATCTCTTTGCTCTTGT...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGCTCACGCCTGTAATCTaGGCACTTTGGAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRLTPVI*ALWKAK
Trigger: TTTGGCTTTCCAAAGTGCCCAGATTACAGGCGTGAG...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
3UTR CAA 72 bp TCAGAGAATGCCCACGAACGGTGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCGTGTGACCGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SENAHERCPPPQ*TMCSFSCDRGF
Trigger: GAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CTTGACCTCGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTGCCAGCAGTGCCCACATGCCCACTaGTTCGTCGGTCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: LDLDVIEIQGPCISHCQQCPHAH*FVGQVL
Trigger: TAGCACCTGACCGACGAATCAGTGGGCATGTGGGCA...CTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGCACGCTTTACACAAGTaGTCTCACGGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWHALHK*SHGHAD
Trigger: GTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTG...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCTGTCCTCACTACATGTaGTCACAATGTCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: HGHHLLPSRHAEHGHRQPCPHYM*SQCQSS
Trigger: ACTTGACTGACATTGTGATCACATGTAGTGAGGACA...GGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCGGTTACAAACAGCTGTaGGTGCGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QSHSLECTWPTTGLEAESGYKQL*VRGLSL
Trigger: CAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACC...GCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSGTKGA*HGRRGG
Trigger: GCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCC...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGGGTCTAGCATGGTGGTaGGATCCCAGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRTVESWSSMVVRSQKARGLAWW*DPRKPG
Trigger: GCCTGGCTTTCTGGGATCTCACCACCATGCTAGACC...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GTCAGCTCCTTCCAGGCGTCTCCAATCAGGCAGGCTGAAGAGAGGGTGCACCTGTTGATCAATGGAGGCTaGGACCATGATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VSSFQASPIRQAEERVHLLINGG*DHDAWA
Trigger: AGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAA...CAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGACGCCTGGAAGGAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGTGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 4 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTCAACTCGGAGTCCCTTaGTTCCAAACACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: VTASSRQEPARVTALSVPQLGVP*FQTQPP
Trigger: TGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTG...AGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CGGCTTGGGGTGCTGGGGTCCGGAGTAACCATGATGCTGAAGCAGTGCATCTCAGCACCTCTTGCAGGATaGACCCTACTACAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLGVLGSGVTMMLKQCISAPLAG*TLLQGH
Trigger: ATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGC...TGAGATGCACTGCTTCAGCATCATGGTTACTCCGGACCCCAGCACCCCAAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGGCACCTCTTGCAGGATaGACCCTACTACAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRAPLAG*TLLQGH
Trigger: ATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGC...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACACCAGGACATCGGGGGTGCACCTGTCTGTaGAGGGCACCTCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALSSADAHQSPSCTPGHRGCTCL*RAPLAG
Trigger: TCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCC...CCGATGTCCTGGTGTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CACACAGCAAGGGACATGTACCTGGTCTCTGGGTCTACCTTAACCATCCGATGCGGGTGCACCTGTCTGTaGAGGGCACCTCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTARDMYLVSGSTLTIRCGCTCL*RAPLAG
Trigger: TCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCC...GCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTACATGTCCCTTGCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR GCA 90 bp AGCACGCCAGCCACCGCAGGATACCTCAGTCATACCAGTTGTAAACCTCAAGCCCACACACGGGCGCTGTaGCCAAAGCAGTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: STPATAGYLSHTSCKPQAHTRAL*PKQCPI
Trigger: TATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTG...GGCTTGAGGTTTACAACTGGTATGACTGAGGTATCCTGCGGTGGCTGGCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATACGAACGCTTCGGTGACACAATCCTCTCCTaGACTGATAAGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: PDPQALAGRPPSRYERFGDTILS*TDKVIL
Trigger: GAGAATTACCTTATCAGTGCAGGAGAGGATTGTGTC...ACCGAAGCGTTCGTATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTCTCGGGACCAGGAGCTaGCTCCAGCAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRALGTRS*LQQAVG
Trigger: TCCTACTGCCTGCTGGAGGCAGCTCCTGGTCCCGAG...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGGCCCAGCTCAAGCTGTaGACCTTCCCAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSAQLKL*TFPGNR
Trigger: CCTGTTTCCTGGGAAGGTGCACAGCTTGAGCTGGGC...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATCCCGCCAGGGCCCGATaGCAGCAACAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHPARAR*QQQELL
Trigger: GAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGCATGTGTGCCATCTCTaGTTGCTTGGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMHVCHL*LLGGSR
Trigger: CCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATG...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCATGTGTGCCATCTCTaGTTGCTTGGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEHVCHL*LLGGSR
Trigger: CCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCACTACCCACTACAGGTaGCCCAGCACCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSTTHYR*PSTSPS
Trigger: GCTCGGGCTGGTGCTGGGGCACCTGTAGTGGGTAGT...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAACACCCTGCTTCCCGTaGAGAGAGGGCAGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTTPCFP*REGRVD
Trigger: GTCTACCCTGCCCTCTCTGCACGGGAAGCAGGGTGT...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAACACCCTGCTTCCCGTaGAGAGAGGGCAGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGTPCFP*REGRVD
Trigger: GTCTACCCTGCCCTCTCTGCACGGGAAGCAGGGTGT...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRPQLTM*SFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGG...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTTCACGTGTGGCCGGGTaGAGCCACCCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTASRVAG*SHPEPC
Trigger: ACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGA...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACACCAGGACATCGGCGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ALSSADAHQSPSCTPGHRRWDER*MTWQAR
Trigger: CCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCG...CCGATGTCCTGGTGTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTGCCAGCAGTCGCCAAGCCATCCGATGCCGATTaGGTTGCCGGTCCCAATACT +
Preference number: 4 (lower is better)
Translates to: RRHRDTGPLYQSLPAVAKPSDAD*VAGPNT
Trigger: AGTATTGGGACCGGCAACGCAATCGGCATCGGATGG...CTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGTLTIR*RLRCRS
Trigger: GGACCGGCAACGCAATCGGCATCGGATGGTTAAGGT...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAATLTIR*RLRCRS
Trigger: GGACCGGCAACGCAATCGGCATCGGATGGTTAAGGT...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACACCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWVSARS*RIRPES
Trigger: GGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCCCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAPPLVG*LVCKGV
Trigger: CACTCCTTTACACACGAGGCACCCAACCAGAGGCGG...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTAAISS*AAQEEP
Trigger: AGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGC...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCCGGGTGGGCAAGGTGTaGAGGCTGTTGATACCACAG +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSARVGKV*RLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCG...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGGAGCTGTGCGTGAGGTaGTCCATACTGGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMELCVR*SILAWL
Trigger: TAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACCATGGCCTCCAAGTCCTGTCAGGTGGAGCCTaGAAGCCTGGGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: FHNSESLASKHSHHGLQVLSGGA*KPGSIC
Trigger: GCAGATGCTCCCAGGCTTGCAGGCTCCACCTGACAG...GACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
CDS-3UTR CCA 90 bp TCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCAGAGCGCCTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SSQRASQIQSDMFHRPERLQTRH*EEYKLR
Trigger: TCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAG...GCGCTCTGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATA +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGSTTEL*PRAKAI
Trigger: TATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCT...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RLWLGASCVKEWTLRTHRYQTKS*LETAPA
Trigger: GGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTA...GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTTACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: VTASSRQEPARVTALSVPYQTKS*LETAPA
Trigger: GGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTA...AGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAACPRKA*RISPSW
Trigger: CCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACA...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTTCTCATGGGCAGCTATaGCCCGGATCCCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: LTKMALPEGAAEISRQATSHGQL*PGSHVP
Trigger: AGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGA...AGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGGGTGCACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: RVHLSVQGTSCRMHPTTGSLECT*PTTGLE
Trigger: TTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCT...CCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCAGAGCGCCCAGGAAACAGGGTCTaGTCCACAGCAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SSQRASQIQSDMFHRPERPGNRV*STAAVG
Trigger: TCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGG...GCGCTCTGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCCATCTCTGCTTGCTTaGGGGCAGCAGGTACCGACA +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEPSLLA*GQQVPT
Trigger: TGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACACCAGGACATCGGGGGCAGGGTAGACACTaGGCCCAACCCAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ALSSADAHQSPSCTPGHRGQGRH*AQPSES
Trigger: GCTTTCACTGGGTTGGGCCCAGTGTCTACCCTGCCC...CCGATGTCCTGGTGTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGGGGCAGGGTAGACACTaGGCCCAACCCAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SISTASTKTWRDPSSLPLGQGRH*AQPSES
Trigger: GCTTTCACTGGGTTGGGCCCAGTGTCTACCCTGCCC...CAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGAAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRRTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACGTACCGAGGAGATATaGTTACAAACAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPRTEEI*LQTAVS
Trigger: ACTCACAGCTGTTTGTAACCATATCTCCTCGGTACG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCGTACCGAGGAGATATaGTTACAAACAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: QRVRLRSLGKLLPRQGPMRTEEI*LQTAVS
Trigger: ACTCACAGCTGTTTGTAACCATATCTCCTCGGTACG...CATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGTCATATAGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TCLCRAPLAGCTLLQGHIERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...TATATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLTHRLW*KVSARS
Trigger: GCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCTHRLW*KVSARS
Trigger: GCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPRTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLRTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAEAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCCATCTTCACTGCCACTaGCCACGAGATGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAHLHCH*PRDGGP
Trigger: AGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATG...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GAGCTGTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACGCCACATCAGGCACATaGAACACAGTGCTATTCATG +
Preference number: 4 (lower is better)
Translates to: ELCVRCSILAWLCWVSLHATSGT*NTVLFM
Trigger: CATGAATAGCACTGTGTTCCATGTGCCTGATGTGGC...GTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCCACATCAGGCACATaGAACACAGTGCTATTCATG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPATSGT*NTVLFM
Trigger: CATGAATAGCACTGTGTTCCATGTGCCTGATGTGGC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCGCCACATCAGGCACATaGAACACAGTGCTATTCATG +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSATSGT*NTVLFM
Trigger: CATGAATAGCACTGTGTTCCATGTGCCTGATGTGGC...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGACCAAGGGCACAACGGTaGCCAAACTCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRPRAQR*PNSGLT
Trigger: TGTGAGCCCTGAGTTTGGCCACCGTTGTGCCCTTGG...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCCCAAGGGCACAACGGTaGCCAAACTCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: QSHSLECTWPTTGLEAESPRAQR*PNSGLT
Trigger: TGTGAGCCCTGAGTTTGGCCACCGTTGTGCCCTTGG...GCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCCCAAGGGCACAACGGTaGCCAAACTCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLPRAQR*PNSGLT
Trigger: TGTGAGCCCTGAGTTTGGCCACCGTTGTGCCCTTGG...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCTCCATACTGGCCTaGCTATGCTGGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSACSILA*LCWVSL
Trigger: GAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCA...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGAGCACACAGCAAAATaGGGTGGGACGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLEHTAK*GGTCRE
Trigger: CTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTC...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTACAAGAGCAAAGAGATaGGCCAGTGACTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPTRAKR*ASDSVS
Trigger: AGAGACTGAGTCACTGGCCCATCTCTTTGCTCTTGT...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCTTCTTTATTCTGGCCTaGGGCACAAGAGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIFFILA*GTRAKR
Trigger: TCTCTTTGCTCTTGTGCCCCAGGCCAGAATAAAGAA...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGCTCTATTCTTTATTCTaGCCTGGGGCACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRLYSLF*PGAQEQ
Trigger: TTGCTCTTGTGCCCCAGGCCAGAATAAAGAATAGAG...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGTAATCTGGGCACTTTaGAAAGCCAAAGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLVIWAL*KAKARL
Trigger: GAGTCTGGCTTTGGCTTTCCAAAGTGCCCAGATTAC...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CCA 90 bp TTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACCATGGCCTCCAAGTCCATGCAGCTGTCAGGTaGAGCCTGCAAGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FHNSESLASKHSHHGLQVHAAVR*SLQAWE
Trigger: CTCCCAGGCTTGCAGGCTCCACCTGACAGCTGCATG...GACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CAA 72 bp GTGTTGATGGGGACAACCTTGACACGACCTTCCCCATaGGCCATAGCACACAATCCGAAGCCCTCGGGACCA +
Preference number: 4 (lower is better)
Translates to: VLMGTTLTRPSP*AIAHNPKPSGP
Trigger: TGGTCCCGAGGGCTTCGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp CTGGTCTCTGGGTCTACCTTAACCATCCGATGCCGATaGCGTTGCCGGTCCCAATACTCATCTAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LVSGSTLTIRCR*RCRSQYSSSRW
Trigger: CCACCGGCTAGATGAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATGCGGCGGTTGTCCAATaGCGACCCTTCGTCCCACGC +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHAAVVQ*RPFVPR
Trigger: GCGTGGGACGAAGGGTCGTCATTGGACAACCGCCGC...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR TCA 90 bp TTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTTCCAATCAGGCAGGCTaGAGAGAGGGTGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: LTKMALPEGAAEISRQATSNQAG*REGAPV
Trigger: GACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGA...AGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGNASVF*SCSQQS
Trigger: GGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTT...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GCTGGTAGTAGGCTCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGAATTCTCTAGAAGCTTaGCCTGCCACACACGGGCGC +
Preference number: 4 (lower is better)
Translates to: AGSRLHHALWYTHSHHGMNSLEA*PATHGR
Trigger: GCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAATT...CATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGAGCCTACTACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGCCTACTACGGGACTTaGAGCAGAGAGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKAYYGT*SREPRP
Trigger: GGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGC...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATCCACCCCAGGGTCCTTaGGCAGACCTGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHPPQGP*ADLVWR
Trigger: CCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGG...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAGGTCATCAGGCTGCATaGAGCTGGGCACTCCATATT +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGGHQAA*SWALHI
Trigger: AATATGGAGTGCCCAGCTTCATGCAGCCTGATGACC...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCTGTCCTCACTACATGTaGTCACAATGTCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPICPHYM*SQCQSS
Trigger: ACTTGACTGACATTGTGATCACATGTAGTGAGGACA...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHGTKGA*HGRRGG
Trigger: GCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCC...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAAGGTGTGCAGGCTGTTaGTACCACAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTRCAGC*YHSCGP
Trigger: AGGCCCACAGCTGTGGTATCAACAGCCTGCACACCT...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTGGGCTTAGGATCTTaGGGCCTGTCACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMLGLGS*GLSHGQ
Trigger: CTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAA...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTGGAGGCTGAGACCATaGTGCTTGGGCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAWRLRP*CLGLGS
Trigger: AGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCA...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGTTGATCAATGGAGGCTaGGACCATGATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRLINGG*DHDAWA
Trigger: AGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAA...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGCAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSQKVSR*SMEAET
Trigger: GGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTG...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTTCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTASACSF*ELCVRC
Trigger: GCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGA...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGCAACTCGGAGTCCCTTaGTTCCAAACACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLQLGVP*FQTQPP
Trigger: TGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTG...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CAATGCCCCACACAGCCACAGCACGTACCGAGGAGATATGGTTACAAACAGCTGCATGTGTGCCATCTCTaGTTGCTTGGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QCPTQPQHVPRRYGYKQLHVCHL*LLGGSR
Trigger: CCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATG...CAGCTGTTTGTAACCATATCTCCTCGGTACGTGCTGTGGCTGTGTGGGGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACACCAGGACATCGGAATGCCCACGAACGGTaGCCTCCACCACAGTTGACG +
Preference number: 4 (lower is better)
Translates to: ALSSADAHQSPSCTPGHRNAHER*PPPQLT
Trigger: CGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATT...CCGATGTCCTGGTGTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCAGTCGGGCCCCTCACTaGCAGGCTCCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSSRAPH*QAPGHQ
Trigger: CTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACT...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCCATCCGATGCCGATTaGGTTGCCGGTCCCAATACT +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEPSDAD*VAGPNT
Trigger: AGTATTGGGACCGGCAACGCAATCGGCATCGGATGG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTCGGGTGGGCAAGGTGTaGAGGCTGTTGATACCACAG +
Preference number: 4 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPRVGKV*RLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCG...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCGGGATCCATCTTCACTaGCACTGGCCACGAGATGGT +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAGIHLH*HWPRDG
Trigger: ACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCC...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACCAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VASPQQARRHGGIHLHCHQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMVSIRL*PYPEAM
Trigger: CATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGAC...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: SISTASTKTWRDPSSLPLVSIRL*PYPEAM
Trigger: CATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGAC...CAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGCAAACACAGCCACCATaGCCTCCAAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLQTQPP*PPSQGL
Trigger: GAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTG...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGACAAACACAGCCACCATaGCCTCCAAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GSPSTEPHLRPQRLQYLGQTQPP*PPSQGL
Trigger: GAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTG...TCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GCTGGTAGTAGGCTCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGTGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: AGSRLHHALWYTHSHHGMCPRKA*RISPSW
Trigger: CCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACA...CATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGAGCCTACTACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTCCCCGAAAGGCCTaGAGGATCTCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRCPRKA*RISPSW
Trigger: CCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACA...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACCGGATCCCACGTCCCTaGTGTCCCCGAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYRIPRP*CPRKAW
Trigger: CCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCG...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACTCTCATGGGCAGCTATaGCCCGGATCCCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSPANFHNSESLASKHSHSHGQL*PGSHVP
Trigger: AGGGACGTGGGATCCGGGCCATAGCTGCCCATGAGA...GTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGTCCACAGCAGCAGTTaGAGTGTTGATGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLVHSSS*SVDGDN
Trigger: GTTGTCCCCATCAACACTCCAACTGCTGCTGTGGAC...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGGGCAGGGTAGACACTaGGCCCAACCCAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKGQGRH*AQPSES
Trigger: GCTTTCACTGGGTTGGGCCCAGTGTCTACCCTGCCC...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTTGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: LTKMALPEGAAEISRQATCLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...AGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCGTACCGAGGAGATATaGTTACAAACAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTRTEEI*LQTAVS
Trigger: ACTCACAGCTGTTTGTAACCATATCTCCTCGGTACG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCGAAAGGTGCATGACATaGCAGGCGAGGCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSERCMT*QARRLG
Trigger: CCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTC...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTTACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 4 (lower is better)
Translates to: VTASSRQEPARVTALSVPYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...AGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ATCCTTGAGGTAAGCAAAGGCCATGGCCGCCTCAGTATCAGAGAATGCCCACGAAAGCCCAGGATCCACTaGAGGCTCCAGGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: ILEVSKGHGRLSIRECPRKPRIH*RLQDSG
Trigger: TCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTT...TCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACCTCAAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACCTGGCCACGAGATGGTaGCCCTCACGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYLATRW*PSRVGK
Trigger: CTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAG...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ATACGAACGCTTCGGTCTTCTGAAGCTGTAGCCAGCAATCCCTTGCTTTCCAGGTCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IRTLRSSEAVASNPLLSRSSTRS*GTSPAS
Trigger: AGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGA...CCTGGAAAGCAAGGGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTTCGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGTCGACCACACCTCTTTaGTCAGATGTTCGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLSTTPL*SDVRPP
Trigger: AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGA...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTGGTACAGCTCAGCATaGATTTCAGCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: STHLQLLHRHQEPTATTSWYSSA*ISAPTT
Trigger: TGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCA...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GAGCTGTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGGTACAGCTCAGCATaGATTTCAGCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: ELCVRCSILAWLCWVSLHWYSSA*ISAPTT
Trigger: TGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCA...GTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCTTCTTTATTCTGGCCTaGGGCACAAGAGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: THLQLLHRHQEPTATTSSFFILA*GTRAKR
Trigger: TCTCTTTGCTCTTGTGCCCCAGGCCAGAATAAAGAA...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GAGCTGTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACCTCTATTCTTTATTCTaGCCTGGGGCACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: ELCVRCSILAWLCWVSLHLYSLF*PGAQEQ
Trigger: TTGCTCTTGTGCCCCAGGCCAGAATAAAGAATAGAG...GTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR CAA 72 bp AGCAGGTACCGACAACGTTCCTTGACAAAGATGGCCTaGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SRYRQRSLTKMA*PEGAAEISRQA
Trigger: AGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGTGCCCACATGCCCACTaGTTCGTCGGTCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKCPHAH*FVGQVL
Trigger: TAGCACCTGACCGACGAATCAGTGGGCATGTGGGCA...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ATCCTTGAGGTAAGCAAAGGCCATGGCCGCCTCAGTATCAGAGAATGCCCACGACCAGAGTCACAGCCTTaGGTGTACCTGGCCTACTAC +
Preference number: 4 (lower is better)
Translates to: ILEVSKGHGRLSIRECPRPESQP*VYLAYY
Trigger: GTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGG...TCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACCTCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: VSTQQNGVGRAERYRVKAAAPST*PRRHRD
Trigger: ATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGC...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCACCATGGCATGTGACTaGGGTCACACCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSTMACD*GHTLLP
Trigger: GGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGT...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAAAGCCACCATGGCATGTaGCTGAGGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKSHHGM*LRSHPA
Trigger: AGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCT...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp CTTGACCTCGACGTCATAGAGATACAGGGCCCCTGTATCAGTCACTGCCAGCAGGGTCATCAGGCTGCATaGAGCTGGGCACTCCATATT +
Preference number: 4 (lower is better)
Translates to: LDLDVIEIQGPCISHCQQGHQAA*SWALHI
Trigger: AATATGGAGTGCCCAGCTTCATGCAGCCTGATGACC...CTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTGTCCTCACTACATGTaGTCACAATGTCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTCPHYM*SQCQSS
Trigger: ACTTGACTGACATTGTGATCACATGTAGTGAGGACA...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACGGGACGAAAGGTGCATaGCATGGCAGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHGTKGA*HGRRGG
Trigger: GCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCC...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCGGTCTAGCATGGTGGTaGGATCCCAGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSGLAWW*DPRKPG
Trigger: GCCTGGCTTTCTGGGATCTCACCACCATGCTAGACC...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACACCAGGACATCGGTTGGGCTTAGGATCTTaGGGCCTGTCACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALSSADAHQSPSCTPGHRLGLGS*GLSHGQ
Trigger: CTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAA...CCGATGTCCTGGTGTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGAGTGTTGATGGGTTGATCAATGGAGGCTaGGACCATGATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HLPRKQGLVHSSSWSVDGLINGG*DHDAWA
Trigger: AGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAA...CCCATCAACACTCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TTTCCCTCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCACAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: FPSSQRASQIQSDMFHRPQKVSR*SMEAET
Trigger: GGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTG...TGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACACAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTQKVSR*SMEAET
Trigger: GGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTG...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTTGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: QQALSLSGASTTPLWSDVWVSLH*ATFKAT
Trigger: TGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCA...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTTGGGTCTCCCTCCACTaGGCCACATTTAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPWVSLH*ATFKAT
Trigger: TGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCA...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTTACACATCCTGGGGGTaGGCACACAGCAAAATGGGG +
Preference number: 4 (lower is better)
Translates to: QQALSLSGASTTPLWSDVYTSWG*AHSKMG
Trigger: CCCCATTTTGCTGTGTGCTCACCCCCAGGATGTGTA...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp GTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGTCACAGCCTTGAGTGTACCTTCGGCATGTAGCCTATaGATGCATCAGGACACACAA +
Preference number: 4 (lower is better)
Translates to: VTASSRQEPARVTALSVPSACSL*MHQDTQ
Trigger: TTGTGTGTCCTGATGCATTCATAGGCTACATGCCGA...AGGTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR GCA 90 bp CAATGCCCCACACAGCCACAGCACGTACCGAGGAGATATGGTTACAAACAGCTGTATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: QCPTQPQHVPRRYGYKQLYKLRG*PRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATA...CAGCTGTTTGTAACCATATCTCCTCGGTACGTGCTGTGGCTGTGTGGGGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCCAACTCGGAGTCCCTTaGTTCCAAACACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAQLGVP*FQTQPP
Trigger: TGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTG...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGACAACTCGGAGTCCCTTaGTTCCAAACACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRQLGVP*FQTQPP
Trigger: TGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTG...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATCCCTCAAGCCAGCGTaGATCCCAAATCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRSLKPA*IPNPVR
Trigger: TCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGA...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTGGGTGCACCTGTCTGTaGAGGGCACCTCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAGCTCL*RAPLAG
Trigger: TCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCC...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGAAGATGATGCCCACATaGCCACTGATTCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLKMMPT*PLIRRS
Trigger: TGACCGACGAATCAGTGGGCATGTGGGCATCATCTT...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKQCPIF*TRPPGT
Trigger: AGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTG...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAACACACACGGGCGCTGTaGCCAAAGCAGTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKHTRAL*PKQCPI
Trigger: TATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTG...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTCTAGAAGCTTGACCTaGCACACACGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSSRSLT*HTRALC
Trigger: GCACAGCGCCCGTGTGTGGCAGGTCAAGCTTCTAGA...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCGACACAATCCTCTCCTaGACTGATAAGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLDTILS*TDKVIL
Trigger: GAGAATTACCTTATCAGTGCAGGAGAGGATTGTGTC...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAGACACAATCCTCTCCTaGACTGATAAGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPDTILS*TDKVIL
Trigger: GAGAATTACCTTATCAGTGCAGGAGAGGATTGTGTC...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGAGTGCCACAGCCGAATaGCTGAGTCATCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKSATAE*LSHHPQ
Trigger: CTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACT...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAAAGTGCCACAGCCGAATaGCTGAGTCATCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKSATAE*LSHHPQ
Trigger: CTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACT...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACACTCGGGACCAGGAGCTaGCTCCAGCAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTLGTRS*LQQAVG
Trigger: TCCTACTGCCTGCTGGAGGCAGCTCCTGGTCCCGAG...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACGCCCAGCTCAAGCTGTaGACCTTCCCAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: LSPANFHNSESLASKHSHAQLKL*TFPGNR
Trigger: CCTGTTTCCTGGGAAGGTGCACAGCTTGAGCTGGGC...GTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCACCCGCCAGGGCCCGATaGCAGCAACAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAPARAR*QQQELL
Trigger: GAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGTGTTGATGGGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAATGTGCCATCTCTGCTTaGTTGGGGGCAGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SVDGDNLDTTFPIGHSTQCAISA*LGAAGT
Trigger: GGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACA...TTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGTGCCATCTCTGCTTaGTTGGGGGCAGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSCAISA*LGAAGT
Trigger: GGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACA...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACCCTCGACAGGACTTCTaGCTTAGGACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSPANFHNSESLASKHSHPRQDF*LRTGWS
Trigger: GCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGG...GTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ATACGAACGCTTCGGTCTTCTGAAGCTGTAGCCAGCAATCCCTTGCTTTCCAGGCCTCGACAGGACTTCTaGCTTAGGACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IRTLRSSEAVASNPLLSRPRQDF*LRTGWS
Trigger: GCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGG...CCTGGAAAGCAAGGGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTTCGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CGGTCAGGTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCCCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: RSGATGLLSAKAVAGYQTPQLTM*SFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGG...GGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LTKMALPEGAAEISRQATLSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...AGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCACGTGTGGCCGGGTaGAGCCACCCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHSRVAG*SHPEPC
Trigger: ACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGA...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGTCGGGCCCCTCACTaGCAGGCTCCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYSRAPH*QAPGHQ
Trigger: CTGATGACCTGGAGCCTGGCAGTGAGGGGCCCGACT...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAACGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKERWDER*MTWQAR
Trigger: CCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCG...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGCGATGCCGATTGCGTTaGCGGTCCCAATACTCATCT +
Preference number: 4 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSRCRLR*RSQYSS
Trigger: AGATGAGTATTGGGACCGGCAACGCAATCGGCATCG...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 4 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLVSARS*RIRPES
Trigger: GGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ATACGAACGCTTCGGTCTTCTGAAGCTGTAGCCAGCAATCCCTTGCTTTCCAGGCCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: IRTLRSSEAVASNPLLSRPPLVG*LVCKGV
Trigger: CACTCCTTTACACACGAGGCACCCAACCAGAGGCGG...CCTGGAAAGCAAGGGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTTCGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGCCGCCTCTGGTTGGGTaGCTCGTGTGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKPPLVG*LVCKGV
Trigger: CACTCCTTTACACACGAGGCACCCAACCAGAGGCGG...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACGAGTCAGGGAGGGGGTaGCAAGCCGGTAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHESGRG*QAGREA
Trigger: GGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGGGGATCCATCTTCACTaGCACTGGCCACGAGATGGT +
Preference number: 4 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMGIHLH*HWPRDG
Trigger: ACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCC...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGCACATGGGCAGCATGTaGACAGGGGACAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: SRTVESWSSMVVRSQKARHMGSM*TGDRVF
Trigger: GAATACTCTGTCCCCTGTGCACATGCTGCCCATGTG...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACATGGGCAGCATGTaGACAGGGGACAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEHMGSM*TGDRVF
Trigger: GAATACTCTGTCCCCTGTGCACATGCTGCCCATGTG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCTGTGAGCAGGCCCCATaGCCAGCACGCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGCEQAP*PARQPP
Trigger: CGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACA...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAACAGACAGCCCATCCCTaGTCCATGCTGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKQTAHP*SMLSVS
Trigger: GCTCACAGACAGCATGGAGCAGGGATGGGCTGTCTG...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGACCCATACCACACCCTaGCCAGGAGCATATATTACC +
Preference number: 4 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLTHTTP*PGAYIT
Trigger: GGTAATATATGCTCCTGGGCAGGGTGTGGTATGGGT...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420783.7
CDS-3UTR GCA 90 bp GACATGCTGAAGATGATGCCCACATGCCCACTGATTCGTCGGTCAGGTGCTACACCTGCAGAGACAACATaGAGCTGTCAGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DMLKMMPTCPLIRRSGATPAETT*SCQVEP
Trigger: AGGCTCCACCTGACAGCTGCATGTTGTCTCTGCAGG...TGTAGCACCTGACCGACGAATCAGTGGGCATGTGGGCATCATCTTCAGCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
CDS-3UTR CCA 90 bp CTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACGTCTCCATTAGGCTCTaGCCGTACCCGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: LSPANFHNSESLASKHSHVSIRL*PYPEAM
Trigger: CATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGAC...GTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATA +
Preference number: 4 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGSTTEL*PRAKAI
Trigger: TATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCT...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAGCACCACTGAGTTGTaGCCCAGGGCCAAGGCTATA +
Preference number: 4 (lower is better)
Translates to: VSTQQNGVGRAERYRVKASTTEL*PRAKAI
Trigger: TATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCT...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAATCCGAAGCCCAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: GTTLTRPSPLAIAHNPKPRPRAG*KQHLPL
Trigger: TAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCT...GGGCTTCGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGTGCGTGGGCTGAGCCTGTGGTTGTAGGGAGTGCTAGGACACAGACAGTAGTGAGGATCTCACCTTCATaGCTCCACACCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SAWAEPVVVGSARTQTVVRISPS*LHTKQT
Trigger: TGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCT...CACTACTGTCTGTGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CTCTGGGTCTACCTTAACCATCCGATGCCGATTGCGTTGCCGGTCCCAATACTCGTCCACAGCAGCAGTTaGAGTGTTGATGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: LWVYLNHPMPIALPVPILVHSSS*SVDGDN
Trigger: GTTGTCCCCATCAACACTCCAACTGCTGCTGTGGAC...GAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTGTTGATGGGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAATAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 4 (lower is better)
Translates to: VLMGTTLTRPSPLAIAHNRTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...ATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGAGGACTGGCTGGAGCTaGCCGTCTCGTACAAACAGC +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKRTGWS*PSRTNS
Trigger: GCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCT...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGGTCATCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGGTAAGCAAAGGCCATaGCCGCCTCAGTATCAGAGA +
Preference number: 4 (lower is better)
Translates to: RSSGCMKLGTPYSGPRVMGKQRP*PPQYQR
Trigger: TCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACC...CATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ATCCTTGAGGTAAGCAAAGGCCATGGCCGCCTCAGTATCAGAGAATGCCCACGAACAGCTGTGAGTGCGTaGGCTGAGCCTGTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: ILEVSKGHGRLSIRECPRTAVSA*AEPVVV
Trigger: TACAACCACAGGCTCAGCCCACGCACTCACAGCTGT...TCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACCTCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAACAGCTGTGAGTGCGTaGGCTGAGCCTGTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTTAVSA*AEPVVV
Trigger: TACAACCACAGGCTCAGCCCACGCACTCACAGCTGT...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTCATGTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 4 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAHVPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTACATG...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTGGGCCAAGGCCGGGCTaGTCAAGTTCACACACAGCA +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAGPRPG*SSSHTA
Trigger: TGCTGTGTGTGAACTTGACCAGCCCGGCCTTGGCCC...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRTHRLW*KVSARS
Trigger: GCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GASTTPLWSDVRPPAASERTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMEAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGAGGCTCCAGGACAGTaGAGTCATGGTCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTEAPGQ*SHGLAW
Trigger: CCATGCTAGACCATGACTCCACTGTCCTGGAGCCTC...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGTGTTGATGGGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAAAAGCCCAGGATCCACTaGAGGCTCCAGGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: SVDGDNLDTTFPIGHSTQKPRIH*RLQDSG
Trigger: TCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTT...TTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTCATCTTCACTGCCACTaGCCACGAGATGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRAHLHCH*PRDGGP
Trigger: AGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATG...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTT +
Preference number: 4 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHASSVLS*GVGHIL
Trigger: AAGAATATGCCCGACTCCCCATGACAAGACAGAACT...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTCGACCACACCTCTTTaGTCAGATGTTCGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSASTTPL*SDVRPP
Trigger: AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGA...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTGAGCACACAGCAAAATaGGGTGGGACGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QQALSLSGASTTPLWSDVEHTAK*GGTCRE
Trigger: CTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTC...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GATACAGGGCCCCTGTATCAGTCACTGCCAGCAGTCGCCAAGAGCCAGCCAGAGATATTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 4 (lower is better)
Translates to: DTGPLYQSLPAVAKSQPEILPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTAATAT...CTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420783.7
3UTR CAA 72 bp CCCTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACCATGGCCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: PCPQLIFTTRSP*LPNTATMASKS
Trigger: TGACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp TGCCCACTGATTCGTCGGTCAGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: CPLIRRSGATGL*SAKAVAGYQTK
Trigger: CTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCGACGAATCAGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp ACATGCCCACTGATTCGTCGGTCAGGTGCTACAGGTTaGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACC +
Preference number: 4 (lower is better)
Translates to: TCPLIRRSGATG*LSAKAVAGYQT
Trigger: GGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCGACGAATCAGTGGGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCACCATGGCATGTGACTaGGGTCACACCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSTMACD*GHTLLP
Trigger: GGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGT...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCGGTTACAAACAGCTGTaGGTGCGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSGYKQL*VRGLSL
Trigger: CAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACC...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGTTGGGCTTAGGATCTTaGGGCCTGTCACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKLGLGS*GLSHGQ
Trigger: CTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAA...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATTGATCAATGGAGGCTaGGACCATGATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRLINGG*DHDAWA
Trigger: AGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAA...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTCAACTCGGAGTCCCTTaGTTCCAAACACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPQLGVP*FQTQPP
Trigger: TGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTG...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTCCCTCAAGCCAGCGTaGATCCCAAATCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VASPQQARRHGGIHLHCHSLKPA*IPNPVR
Trigger: TCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGA...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ATACGAACGCTTCGGTCTTCTGAAGCTGTAGCCAGCAATCCCTTGCTTTCCAGGGTGCAGGGCACCTCTTaGAGGATGCACCCTACTACA +
Preference number: 4 (lower is better)
Translates to: IRTLRSSEAVASNPLLSRVQGTS*RMHPTT
Trigger: TGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCAC...CCTGGAAAGCAAGGGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTTCGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCGTTGGAAACAGCACCTaGCACTATGGTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAVGNST*HYGQLL
Trigger: AAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAAC...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGGTTGGAAACAGCACCTaGCACTATGGTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMVGNST*HYGQLL
Trigger: AAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAAC...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCGATTCGTCGGTCAGGTaGTACAGGTTTGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLDSSVR*YRFVVC
Trigger: GCAGACAACAAACCTGTAGCACCTGACCGACGAATC...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACCTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: VASPQQARRHGGIHLHCHLCPKQ*PIFCTR
Trigger: TCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAG...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACACTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTLCPKQ*PIFCTR
Trigger: TCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAG...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCCATGTGTGCCATCTCTaGTTGCTTGGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSHVCHL*LLGGSR
Trigger: CCTGCTGCCCCCAAGCAAGCAGAGATGGCACACATG...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAAGGGGTAGGAAGGCACTaGATGTGTGCCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKGVGRH*MCAISA
Trigger: AGCAGAGATGGCACACATGCAGTGCCTTCCTACCCC...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGGTTCTGCACTCGCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACGGGGTAGGAAGGCACTaGATGTGTGCCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RFCTRFIIRRCPPKSKLYGVGRH*MCAISA
Trigger: AGCAGAGATGGCACACATGCAGTGCCTTCCTACCCC...GTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGCGAGTGCAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCCTCGACAGGACTTCTaGCTTAGGACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAPRQDF*LRTGWS
Trigger: GCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGG...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAACCTCGACAGGACTTCTaGCTTAGGACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKEPRQDF*LRTGWS
Trigger: GCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGG...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAAAATGCCCACGAACGGTaGCCTCCACCACAGTTGACG +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKENAHER*PPPQLT
Trigger: CGTCAACTGTGGTGGAGGGCACCGTTCGTGGGCATT...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCCTCAGTATCAGAGAATaGCCACGAACGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSLSIRE*PRTVPS
Trigger: GGAGGGCACCGTTCGTGGGCATTCTCTGATACTGAG...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTTCCAGGTCATCAGGCTaGATGAAGCTGGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRASRSSG*MKLGTP
Trigger: TGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGA...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGACGATGCCGATTGCGTTaGCGGTCCCAATACTCATCT +
Preference number: 4 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGRCRLR*RSQYSS
Trigger: AGATGAGTATTGGGACCGGCAACGCAATCGGCATCG...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTCGATGCCGATTGCGTTaGCGGTCCCAATACTCATCT +
Preference number: 4 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPRCRLR*RSQYSS
Trigger: AGATGAGTATTGGGACCGGCAACGCAATCGGCATCG...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAACCATCCGATGCCGATTaGGTTGCCGGTCCCAATACT +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKPSDAD*VAGPNT
Trigger: AGTATTGGGACCGGCAACGCAATCGGCATCGGATGG...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAAAACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: CSFSCDRGFHTTNSLAWKTLTIR*RLRCRS
Trigger: GGACCGGCAACGCAATCGGCATCGGATGGTTAAGGT...TTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCACCTTAACCATCCGATaGCGATTGCGTTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSTLTIR*RLRCRS
Trigger: GGACCGGCAACGCAATCGGCATCGGATGGTTAAGGT...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: VASPQQARRHGGIHLHCHVSARS*RIRPES
Trigger: GGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCACACATGGGCAGCATGTaGACAGGGGACAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: VSTQQNGVGRAERYRVKAHMGSM*TGDRVF
Trigger: GAATACTCTGTCCCCTGTGCACATGCTGCCCATGTG...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTGAGCTGTGCGTGAGGTaGTCCATACTGGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAELCVR*SILAWL
Trigger: TAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CGGTCAGGTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCCAAGGGACATGTACCTaGAGAGACAACATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSGATGLLSAKAVAGYQTQGTCT*RDNMQL
Trigger: CAGCTGCATGTTGTCTCTGCAGGTACATGTCCCTTG...GGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCACCTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
CDS-3UTR CCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGAAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRRPRAG*KQHLPL
Trigger: TAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCT...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMYQTKS*LETAPA
Trigger: GGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTA...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLSLECT*PTTGLE
Trigger: TTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCT...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCCATCTCTGCTTGCTTaGGGGCAGCAGGTACCGACA +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAPSLLA*GQQVPT
Trigger: TGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGG...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CCCTTGCTTCCAAACACAGCCACCATGGCCTCCAAGTCAAGGTCTCCATTAGGCCTCCATCACGCCCTGTaGTATACACATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: PLLPNTATMASKSRSPLGLHHAL*YTHSHH
Trigger: ATGGTGGCTATGTGTATACCACAGGGCGTGATGGAG...GCCTAATGGAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAATGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKECLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCGTACCGAGGAGATATaGTTACAAACAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRRTEEI*LQTAVS
Trigger: ACTCACAGCTGTTTGTAACCATATCTCCTCGGTACG...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGCATGTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 4 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSHVPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTACATG...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGTGCGTGGGCTGAGCCTGTGGTTGTAGGGAGTGCTAGGACACAGACAGTAGTGAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SAWAEPVVVGSARTQTVVRTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...CACTACTGTCTGTGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GCTGGTAGTAGGCTCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGC +
Preference number: 4 (lower is better)
Translates to: AGSRLHHALWYTHSHHGMSCVKE*TLRTHR
Trigger: GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGA...CATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGAGCCTACTACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGC +
Preference number: 4 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSSCVKE*TLRTHR
Trigger: GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGA...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCCTTGCTTCCAAACACAGCCACCATGGCCTCCAAGTCAAGGTCTCCATTAGGCAGGACAGTGGAGTCATaGTCTAGCATGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PLLPNTATMASKSRSPLGRTVES*SSMVVR
Trigger: TCTCACCACCATGCTAGACCATGACTCCACTGTCCT...GCCTAATGGAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGAGGACAGTGGAGTCATaGTCTAGCATGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMRTVES*SSMVVR
Trigger: TCTCACCACCATGCTAGACCATGACTCCACTGTCCT...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCAAGCCCAGGATCCACTaGAGGCTCCAGGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSKPRIH*RLQDSG
Trigger: TCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTT...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
3UTR CAA 72 bp TCCACAGCAGCAGTTGGAGTGTTGATGGGGACAACCTaGACACGACCTTCCCCATTGGCCATAGCACACAAT +
Preference number: 4 (lower is better)
Translates to: STAAVGVLMGTT*TRPSPLAIAHN
Trigger: ATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp TTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATaGGCATGGAAACCCAGGATAACCATGCTCCCATCG +
Preference number: 4 (lower is better)
Translates to: FSCDRGFHTTNS*AWKPRITMLPS
Trigger: CGATGGGAGCATGGTTATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
3UTR CAA 72 bp CTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGGTGGAAGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LWLGASCVKEWT*RTHRLWWKVSA
Trigger: TGCTGAAACCTTCCACCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAACCAGAGTCACAGCCTTaGGTGTACCTGGCCTACTAC +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKEPESQP*VYLAYY
Trigger: GTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGG...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTACCGACAACGTTCCTTaGCAAAGATGGCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRATDNVP*QRWPCQ
Trigger: CTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGT...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCCACGCTTTACACAAGTaGTCTCACGGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSHALHK*SHGHAD
Trigger: GTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTG...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGTGTCCTCACTACATGTaGTCACAATGTCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRCPHYM*SQCQSS
Trigger: ACTTGACTGACATTGTGATCACATGTAGTGAGGACA...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACGGTTACAAACAGCTGTaGGTGCGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYGYKQL*VRGLSL
Trigger: CAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACC...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGGTGTGCAGGCTGTTaGTACCACAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYRCAGC*YHSCGP
Trigger: AGGCCCACAGCTGTGGTATCAACAGCCTGCACACCT...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp AGTGTTGATGGGGACAACCTTGACACGACCTTCCCCATTGGCCATAGCACACAATGGAGGCTGAGACCATaGTGCTTGGGCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: SVDGDNLDTTFPIGHSTQWRLRP*CLGLGS
Trigger: AGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCA...TTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAQKVSR*SMEAET
Trigger: GGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTG...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAACAGAAGGTCAGCCGTTaGTCAATGGAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKEQKVSR*SMEAET
Trigger: GGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTG...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAACACAGTGCTATTCATaGAGGTGGGTTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTTQCYS*RWVHHA
Trigger: GGCATGGTGAACCCACCTTCATGAATAGCACTGTGT...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCATCCGCCTGCAGCTTCTaGGAGCTGTGCGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLASACSF*ELCVRC
Trigger: GCACCTCACGCACAGCTCTCAGAAGCTGCAGGCGGA...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCACAGCTGCCAGCCCGCTaGACCTATCGCGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAQLPAR*TYRGLC
Trigger: ACAGAGTCCGCGATAGGTGCAGCGGGCTGGCAGCTG...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395474.7
CDS-3UTR GCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAATATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKEYKLRG*PRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATA...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCTGGTAGTAGGCTCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: AGSRLHHALWYTHSHHGMFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...CATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGAGCCTACTACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACGCACCTCTTGCAGGATaGACCCTACTACAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LSPANFHNSESLASKHSHAPLAG*TLLQGH
Trigger: ATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGC...GTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTGTGCAGGGCACCTCTTaGAGGATGCACCCTACTACA +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAVQGTS*RMHPTT
Trigger: TGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCAC...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTAAGATGATGCCCACATaGCCACTGATTCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPKMMPT*PLIRRS
Trigger: TGACCGACGAATCAGTGGGCATGTGGGCATCATCTT...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATGGCTCCACACCAAGCAGAGACACAATCCTCTCCTaGACTGATAAGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: GVPERPGGSHLHGSTPSRDTILS*TDKVIL
Trigger: GAGAATTACCTTATCAGTGCAGGAGAGGATTGTGTC...TCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHVITQA*LSWAAM
Trigger: CATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCAC...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATAGTGCCACAGCCGAATaGCTGAGTCATCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHSATAE*LSHHPQ
Trigger: CTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACT...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACACCTCGACAGGACTTCTaGCTTAGGACTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTPRQDF*LRTGWS
Trigger: GCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGAGG...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGCGATGCCGATTGCGTTaGCGGTCCCAATACTCATCT +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKRCRLR*RSQYSS
Trigger: AGATGAGTATTGGGACCGGCAACGCAATCGGCATCG...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACCCCATCACTACAGGCTaGAGCCACAAGGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHPITTG*SHKGAK
Trigger: CTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGG...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKVSARS*RIRPES
Trigger: GGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATCGGGTGGGCAAGGTGTaGAGGCTGTTGATACCACAG +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHRVGKV*RLLIPQ
Trigger: CTGTGGTATCAACAGCCTGCACACCTTGCCCACCCG...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAAAGGTGGGTTCACCATaGCCCAGACGCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTKVGSP*PRRQKV
Trigger: GACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTT...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGAGCTGTGCGTGAGGTaGTCCATACTGGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTELCVR*SILAWL
Trigger: TAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACGAGCTGTGCGTGAGGTaGTCCATACTGGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYELCVR*SILAWL
Trigger: TAGCCAGGCCAGTATGGAGCACCTCACGCACAGCTC...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAACAAACACAGCCACCATaGCCTCCAAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKQTQPP*PPSQGL
Trigger: GAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTG...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAAACAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: CSFSCDRGFHTTNSLAWKQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...TTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTCAGGCCTGCCTCTCATaGGCAGCTATGGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTQACLS*AAMARI
Trigger: GATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTG...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACACCAGGACATCGGAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: ALSSADAHQSPSCTPGHRSLECT*PTTGLE
Trigger: TTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCT...CCGATGTCCTGGTGTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTCTCCATCACGCCCTGTaGTATACACATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPLHHAL*YTHSHH
Trigger: ATGGTGGCTATGTGTATACCACAGGGCGTGATGGAG...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACACTCCATCACGCCCTGTaGTATACACATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTLHHAL*YTHSHH
Trigger: ATGGTGGCTATGTGTATACCACAGGGCGTGATGGAG...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCGGTAAGCAAAGGCCATaGCCGCCTCAGTATCAGAGA +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSGKQRP*PPQYQR
Trigger: TCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACC...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGAGTGTTGATGGGCGTACCGAGGAGATATaGTTACAAACAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: HLPRKQGLVHSSSWSVDGRTEEI*LQTAVS
Trigger: ACTCACAGCTGTTTGTAACCATATCTCCTCGGTACG...CCCATCAACACTCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCACATGTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 4 (lower is better)
Translates to: VSTQQNGVGRAERYRVKAHVPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTACATG...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACACATGTACCTGGTCTCTaGGTCTACCTTAACCATCCG +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTHVPGL*VYLNHP
Trigger: CGGATGGTTAAGGTAGACCCAGAGACCAGGTACATG...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACGGGCCAAGGCCGGGCTaGTCAAGTTCACACACAGCA +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHGPRPG*SSSHTA
Trigger: TGCTGTGTGTGAACTTGACCAGCCCGGCCTTGGCCC...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAAGCCCAGGATCCACTaGAGGCTCCAGGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYKPRIH*RLQDSG
Trigger: TCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTT...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCCTTGCTTCCAAACACAGCCACCATGGCCTCCAAGTCAAGGTCTCCATTAGGCGCCACATCAGGCACATaGAACACAGTGCTATTCATG +
Preference number: 4 (lower is better)
Translates to: PLLPNTATMASKSRSPLGATSGT*NTVLFM
Trigger: CATGAATAGCACTGTGTTCCATGTGCCTGATGTGGC...GCCTAATGGAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp ACCTGTCTGTGCAGGGCACCTCTTGCAGGATGCACCCTACTACAGGGTCATATAAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTT +
Preference number: 4 (lower is better)
Translates to: TCLCRAPLAGCTLLQGHISRAYS*QHSTHL
Trigger: AAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACT...TATATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTT +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTSRAYS*QHSTHL
Trigger: AAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACT...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACACACAGCAAAATGGGGTaGGACGTGCAGAGAGGTATA +
Preference number: 4 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTHSKMG*DVQRGI
Trigger: TATACCTCTCTGCACGTCCCACCCCATTTTGCTGTG...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCACAAGAGCAAAGAGATaGGCCAGTGACTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSATRAKR*ASDSVS
Trigger: AGAGACTGAGTCACTGGCCCATCTCTTTGCTCTTGT...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACCCAGAGTCACAGCCTTaGGTGTACCTGGCCTACTAC +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYPESQP*VYLAYY
Trigger: GTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGG...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACGCTGCTCCCAGCACTTaGCCTCGACGTCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYAAPST*PRRHRD
Trigger: ATCTCTATGACGTCGAGGTCAAGTGCTGGGAGCAGC...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCCACGCTTTACACAAGTaGTCTCACGGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSHALHK*SHGHAD
Trigger: GTCTGCATGGCCGTGAGATCACTTGTGTAAAGCGTG...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACAGGTGTGCAGGCTGTTaGTACCACAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHRCAGC*YHSCGP
Trigger: AGGCCCACAGCTGTGGTATCAACAGCCTGCACACCT...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAAACACAGTGCTATTCATaGAGGTGGGTTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKTQCYS*RWVHHA
Trigger: GGCATGGTGAACCCACCTTCATGAATAGCACTGTGT...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCGGGTGCACCTGTCTGTaGAGGGCACCTCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGGCTCL*RAPLAG
Trigger: TCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCC...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CAGGTTCTGCACTCGCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTAGTTGGAAACAGCACCTaGCACTATGGTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QVLHSLYHPQMPTKVQAVVGNST*HYGQLL
Trigger: AAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAAC...TACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGCGAGTGCAGAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp CTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACGATTCGTCGGTCAGGTaGTACAGGTTTGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LSPANFHNSESLASKHSHDSSVR*YRFVVC
Trigger: GCAGACAACAAACCTGTAGCACCTGACCGACGAATC...GTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTTATCCTCTAGCAGCTaGTCCCAGCACTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSLSSSS*SQHLTS
Trigger: CGAGGTCAAGTGCTGGGAGCAGCTGCTAGAGGATAA...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGCCCGCCAGGGCCCGATaGCAGCAACAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRPARAR*QQQELL
Trigger: GAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTGTGCCATCTCTGCTTaGTTGGGGGCAGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHCAISA*LGAAGT
Trigger: GGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACA...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 4 (lower is better)
Translates to: QQALSLSGASTTPLWSDVIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGGGATCCATCTTCACTaGCACTGGCCACGAGATGGT +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTGIHLH*HWPRDG
Trigger: ACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCC...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACAAGGTGGGTTCACCATaGCCCAGACGCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHKVGSP*PRRQKV
Trigger: GACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTT...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACCTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYLQTRH*EEYKLR
Trigger: TCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAG...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAAACACAGCCACCATaGCCTCCAAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAQTQPP*PPSQGL
Trigger: GAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTG...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACCAGCACCTGCCACTATaGTCAGCTCCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHQHLPL*SAPSRR
Trigger: ACGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTG...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAATACCAGACCAAGAGCTaGTTGGAAACAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKEYQTKS*LETAPA
Trigger: GGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTA...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGGTTCTGCACTCGCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACAGGATCTCACCTTCATaGCTCCACACCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: RFCTRFIIRRCPPKSKLYRISPS*LHTKQT
Trigger: TGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCT...GTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGCGAGTGCAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCAGGACAGTGGAGTCATaGTCTAGCATGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSRTVES*SSMVVR
Trigger: TCTCACCACCATGCTAGACCATGACTCCACTGTCCT...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCATCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLASSTRS*GTSPAS
Trigger: AGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGA...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTTAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTT +
Preference number: 4 (lower is better)
Translates to: PLVGCLVCKGVDLEDTSLSSVLS*GVGHIL
Trigger: AAGAATATGCCCGACTCCCCATGACAAGACAGAACT...AAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACGAGCACACAGCAAAATaGGGTGGGACGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYEHTAK*GGTCRE
Trigger: CTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTC...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGAGATATGCAAGTTCCTaGTACAGCTCAGCATGGATT +
Preference number: 4 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLRYASS*YSSAWI
Trigger: AATCCATGCTGAGCTGTACCAGGAACTTGCATATCT...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACACAGACAGTAGTGTCCTCACTACATGTGATCACAATGTCAGTCAAGTCGGGCAACGCTTCGGTCTTCTaGAGCTGTAGCCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: TQTVVSSLHVITMSVKSGNASVF*SCSQQS
Trigger: GGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTT...GCCCGACTTGACTGACATTGTGATCACATGTAGTGAGGACACTACTGTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGCCACCCCAGGGTCCTTaGGCAGACCTGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRPPQGP*ADLVWR
Trigger: CCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGG...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCCCTCCACCACAGTTaGCGATGTGCAGCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAALHHS*RCAASR
Trigger: ACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGC...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AGACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTCCTCACTACATGTaGTCACAATGTCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: RPAGPFSFRSLDHTSLVRCPHYM*SQCQSS
Trigger: ACTTGACTGACATTGTGATCACATGTAGTGAGGACA...TCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCGGTTACAAACAGCTGTaGGTGCGTGGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGGYKQL*VRGLSL
Trigger: CAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACC...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACATGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTRLKRG*TCLCRA
Trigger: TGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCT...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACCTGTGCCCAAAGCAGTaGCCAATATTCTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: KRWASDSVSVSRYASSWYLCPKQ*PIFCTR
Trigger: TCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAG...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCGACACAATCCTCTCCTaGACTGATAAGGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLDTILS*TDKVIL
Trigger: GAGAATTACCTTATCAGTGCAGGAGAGGATTGTGTC...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAVITQA*LSWAAM
Trigger: CATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCAC...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCGTGATCACCCAGGCCTaGCTCTCATGGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGVITQA*LSWAAM
Trigger: CATAGCTGCCCATGAGAGGCAGGCCTGGGTGATCAC...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCCCCTGTATCAGTCACTaGCAGCAGTCGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGPCISH*QQSPRA
Trigger: GGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGG...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCATGTGCCATCTCTGCTTaGTTGGGGGCAGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLACAISA*LGAAGT
Trigger: GGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACA...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATCCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHPQLTM*SFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGG...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGAGGGCCACCTGGGGTaGCAATGCCCCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSREGHLG*QCPTQP
Trigger: TGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTC...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp GTGCTACAGGTTTGTTGTCTGCTAAGGCAGTTGCTGGGTACCAGACCAAGAGCTATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 4 (lower is better)
Translates to: VLQVCCLLRQLLGTRPRAIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...AGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACAACAAACCTGTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR GCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCGCTGCCATCAGTAGCTaGGCTGCACAGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFAAISS*AAQEEP
Trigger: AGGCTCCTCCTGTGCAGCGCAGCTACTGATGGCAGC...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp CCCTTGCTTCCAAACACAGCCACCATGGCCTCCAAGTCAAGGTCTCCATTAGGCCATGTAGCCTATGAATaGATCAGGACACACAATCCT +
Preference number: 4 (lower is better)
Translates to: PLLPNTATMASKSRSPLGHVAYE*IRTHNP
Trigger: AGGATTGTGTGTCCTGATGCATTCATAGGCTACATG...GCCTAATGGAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CCA 90 bp ACACAGACAGTAGTGTCCTCACTACATGTGATCACAATGTCAGTCAAGTCGGGCCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: TQTVVSSLHVITMSVKSGQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...GCCCGACTTGACTGACATTGTGATCACATGTAGTGAGGACACTACTGTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSRPRAG*KQHLPL
Trigger: TAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCT...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTAGGATCTCACCTTCATaGCTCCACACCAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTARISPS*LHTKQT
Trigger: TGTCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCT...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTCCATCTCTGCTTGCTTaGGGGCAGCAGGTACCGACA +
Preference number: 4 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTPSLLA*GQQVPT
Trigger: TGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGG...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCCCACTGGCCACGAGATaGTGGCCCTCACGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVPLATR*WPSRVG
Trigger: GCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGG...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTCTAGCACACGCAGCTaGGGTACCAGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFSSTRS*GTSPAS
Trigger: AGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGA...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGCCACATCAGGCACATaGAACACAGTGCTATTCATG +
Preference number: 4 (lower is better)
Translates to: STQQNGVGRAERYRVKAKATSGT*NTVLFM
Trigger: CATGAATAGCACTGTGTTCCATGTGCCTGATGTGGC...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCTGCTCCATACTGGCCTaGCTATGCTGGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGCSILA*LCWVSL
Trigger: GAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCA...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTTGGTACAGCTCAGCATaGATTTCAGCTCCTACTACA +
Preference number: 4 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPWYSSA*ISAPTT
Trigger: TGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCA...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGAGATATGCAAGTTCCTaGTACAGCTCAGCATGGATT +
Preference number: 4 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGERYASS*YSSAWI
Trigger: AATCCATGCTGAGCTGTACCAGGAACTTGCATATCT...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGCTCTATTCTTTATTCTaGCCTGGGGCACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMLYSLF*PGAQEQ
Trigger: TTGCTCTTGTGCCCCAGGCCAGAATAAAGAATAGAG...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTGCCCACATGCCCACTaGTTCGTCGGTCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFCPHAH*FVGQVL
Trigger: TAGCACCTGACCGACGAATCAGTGGGCATGTGGGCA...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGATGTCCTCACTACATGTaGTCACAATGTCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGCPHYM*SQCQSS
Trigger: ACTTGACTGACATTGTGATCACATGTAGTGAGGACA...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR TCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCTTGGGCTTAGGATCTTaGGGCCTGTCACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGLGLGS*GLSHGQ
Trigger: CTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAA...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACGCACCTCTTGCAGGATaGACCCTACTACAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHAPLAG*TLLQGH
Trigger: ATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGC...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCGTGCAGGGCACCTCTTaGAGGATGCACCCTACTACA +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGVQGTS*RMHPTT
Trigger: TGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCAC...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGGGGTAGGAAGGCACTaGATGTGTGCCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAGVGRH*MCAISA
Trigger: AGCAGAGATGGCACACATGCAGTGCCTTCCTACCCC...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCGAGGGCCACCTGGGGTaGCAATGCCCCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVEGHLG*QCPTQP
Trigger: TGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTC...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHQSSQK*PCPQLI
Trigger: AATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTG...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACATACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RWASDSVSVSRYASSWYSTHRLW*KVSARS
Trigger: GCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT...GCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAAAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: TQQNGVGRAERYRVKAKERTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCCCAAGGGCACAACGGTaGCCAAACTCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFPRAQR*PNSGLT
Trigger: TGTGAGCCCTGAGTTTGGCCACCGTTGTGCCCTTGG...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAAAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTT +
Preference number: 4 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKSSVLS*GVGHIL
Trigger: AAGAATATGCCCGACTCCCCATGACAAGACAGAACT...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACACACAGCAAAATGGGGTaGGACGTGCAGAGAGGTATA +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTHSKMG*DVQRGI
Trigger: TATACCTCTCTGCACGTCCCACCCCATTTTGCTGTG...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGTGTGAGTGCGTGGGCTaGGCCTGTGGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRCECVG*ACGCRE
Trigger: CTCCCTACAACCACAGGCTCAGCCCACGCACTCACA...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCTCCCTCAAGCCAGCGTaGATCCCAAATCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGSLKPA*IPNPVR
Trigger: TCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGA...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCGTGCAGGGCACCTCTTaGAGGATGCACCCTACTACA +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFVQGTS*RMHPTT
Trigger: TGTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCAC...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACGTTGGAAACAGCACCTaGCACTATGGTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHVGNST*HYGQLL
Trigger: AAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAAC...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTCCACAGTTGACGATGTaGAGCTTCTCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTPQLTM*SFSCDR
Trigger: TCGGTCACACGAGAAGCTGCACATCGTCAACTGTGG...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGCGGTGGGACGAAAGGTaGATGACATGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMRWDER*MTWQAR
Trigger: CCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCG...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCGTTTCAGCAAGGAGCTaGAGAATCCGCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGVSARS*RIRPES
Trigger: GGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAAC...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCCACATGGGCAGCATGTaGACAGGGGACAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGHMGSM*TGDRVF
Trigger: GAATACTCTGTCCCCTGTGCACATGCTGCCCATGTG...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACAGACCAAGAGCTGGTTaGAAACAGCACCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHRPRAG*KQHLPL
Trigger: TAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCT...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCCAGGCCTGCCTCTCATaGGCAGCTATGGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVQACLS*AAMARI
Trigger: GATCCGGGCCATAGCTGCCCATGAGAGGCAGGCCTG...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACAGCCTTGAGTGTACCTaGCCTACTACGGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHSLECT*PTTGLE
Trigger: TTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCT...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGTCCACAGCAGCAGTTaGAGTGTTGATGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAVHSSS*SVDGDN
Trigger: GTTGTCCCCATCAACACTCCAACTGCTGCTGTGGAC...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAAGGACACATCGCTTATaGTGGAAGGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTRTHRL*WKVSAR
Trigger: CCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCT...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACAGTCGGGCATATTCTTaGCAGCACTCCACTCACCTT +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHSRAYS*QHSTHL
Trigger: AAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACT...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCATCGACCACACCTCTTTaGTCAGATGTTCGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLASTTPL*SDVRPP
Trigger: AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGA...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTGGAGGCTGAGACCATaGTGCTTGGGCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFWRLRP*CLGLGS
Trigger: AGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCA...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTGGCCAAGCAGGTTCTaGACTCGCTTTATCATCCGC +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFWPSRF*TRFIIR
Trigger: GCGGATGATAAAGCGAGTGCAGAACCTGCTTGGCCA...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCGCACCTCTTGCAGGATaGACCCTACTACAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFAPLAG*TLLQGH
Trigger: ATGACCCTGTAGTAGGGTGCATCCTGCAAGAGGTGC...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGAGGCTGAAGAGAGGGTaGACCTGTCTGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRRLKRG*TCLCRA
Trigger: TGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCT...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTCCACGCCCTACCAAGTaGCACAGCCGAATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLPRPTK*HSRMPE
Trigger: CTCAGGCATTCGGCTGTGGCACTTGGTAGGGCGTGG...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGCCCTGTATCAGTCACTaGCAGCAGTCGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMPCISH*QQSPRA
Trigger: GGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGG...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCCACATGGGCAGCATGTaGACAGGGGACAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFHMGSM*TGDRVF
Trigger: GAATACTCTGTCCCCTGTGCACATGCTGCCCATGTG...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCCTCCATCACGCCCTGTaGTATACACATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGLHHAL*YTHSHH
Trigger: ATGGTGGCTATGTGTATACCACAGGGCGTGATGGAG...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTTCGTGTGTAAAGGAGTaGACCTTGAGGACACATCGC +
Preference number: 4 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTSCVKE*TLRTHR
Trigger: GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGA...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATAGTTCTGTCTTGTCATaGGGAGTCGGGCATATTCTT +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHSSVLS*GVGHIL
Trigger: AAGAATATGCCCGACTCCCCATGACAAGACAGAACT...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTCAGCATTTCTTTATTCTGGCCTaGGGCACAAGAGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PVTQSLSLDMQVPGTAQHFFILA*GTRAKR
Trigger: TCTCTTTGCTCTTGTGCCCCAGGCCAGAATAAAGAA...ATGCTGAGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTCCAATCAGGCAGGCTaGAGAGAGGGTGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVSNQAG*REGAPV
Trigger: GACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGA...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGAATTCTCTAGAAGCTTaGCCTGCCACACACGGGCGC +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMNSLEA*PATHGR
Trigger: GCGCCCGTGTGTGGCAGGTCAAGCTTCTAGAGAATT...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCGGTCTAGCATGGTGGTaGGATCCCAGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVGLAWW*DPRKPG
Trigger: GCCTGGCTTTCTGGGATCTCACCACCATGCTAGACC...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCCAGTGCCCAATATTCTaGACCCGACCCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVQCPIF*TRPPGT
Trigger: AGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTG...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCCCCTGTATCAGTCACTaGCAGCAGTCGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVPCISH*QQSPRA
Trigger: GGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGG...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGCCCAGCTCAAGCTGTaGACCTTCCCAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLAQLKL*TFPGNR
Trigger: CCTGTTTCCTGGGAAGGTGCACAGCTTGAGCTGGGC...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR GCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGCCATCCGATGCCGATTaGGTTGCCGGTCCCAATACT +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRPSDAD*VAGPNT
Trigger: AGTATTGGGACCGGCAACGCAATCGGCATCGGATGG...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAATCCGCCCAGAATCCTaGAAAAGAAAGAGCCTTACG +
Preference number: 4 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAIRPES*KRKSLT
Trigger: CGTAAGGCTCTTTCTTTTGCAGGATTCTGGGCGGAT...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGCCAGGAAACAGGGTCTaGTCCACAGCAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRPGNRV*STAAVG
Trigger: TCCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGG...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTGCCTTAGGACTGGCTaGAGCTGGCCGTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVCLRTG*SWPSRT
Trigger: TGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCA...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTAAGCCCAGGATCCACTaGAGGCTCCAGGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLKPRIH*RLQDSG
Trigger: TCCACTGTCCTGGAGCCTCCAGTGGATCCTGGGCTT...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTACAAGAGCAAAGAGATaGGCCAGTGACTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTTRAKR*ASDSVS
Trigger: AGAGACTGAGTCACTGGCCCATCTCTTTGCTCTTGT...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACCTCTATTCTTTATTCTaGCCTGGGGCACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHLYSLF*PGAQEQ
Trigger: TTGCTCTTGTGCCCCAGGCCAGAATAAAGAATAGAG...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGTCATCAGGCTGCATaGAGCTGGGCACTCCATATT +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMGHQAA*SWALHI
Trigger: AATATGGAGTGCCCAGCTTCATGCAGCCTGATGACC...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR TCA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTTACACATCCTGGGGGTaGGCACACAGCAAAATGGGG +
Preference number: 4 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLYTSWG*AHSKMG
Trigger: CCCCATTTTGCTGTGTGCTCACCCCCAGGATGTGTA...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR TCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGTTGATCAATGGAGGCTaGGACCATGATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMLINGG*DHDAWA
Trigger: AGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAA...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGCTCCATCACGCCCTGTaGTATACACATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMLHHAL*YTHSHH
Trigger: ATGGTGGCTATGTGTATACCACAGGGCGTGATGGAG...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGTACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTAGATATGCAAGTTCCTaGTACAGCTCAGCATGGATT +
Preference number: 4 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTRYASS*YSSAWI
Trigger: AATCCATGCTGAGCTGTACCAGGAACTTGCATATCT...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCAAGATGATGCCCACATaGCCACTGATTCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVKMMPT*PLIRRS
Trigger: TGACCGACGAATCAGTGGGCATGTGGGCATCATCTT...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CCA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTTACTCATCTAGCCGGTaGGACGAAAGGTGCATGACA +
Preference number: 4 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLYSSSR*DERCMT
Trigger: TGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTA...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGACACATCGCTTATGGTaGAAGGTTTCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRTHRLW*KVSARS
Trigger: GCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGT...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCAGGACAGTGGAGTCATaGTCTAGCATGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVRTVES*SSMVVR
Trigger: TCTCACCACCATGCTAGACCATGACTCCACTGTCCT...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp ACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGCCACATCAGGCACATaGAACACAGTGCTATTCATG +
Preference number: 4 (lower is better)
Translates to: THGQNKLVLFVTKFCLVMATSGT*NTVLFM
Trigger: CATGAATAGCACTGTGTTCCATGTGCCTGATGTGGC...CATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTCACAGCAAAATGGGGTaGGACGTGCAGAGAGGTATA +
Preference number: 4 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLHSKMG*DVQRGI
Trigger: TATACCTCTCTGCACGTCCCACCCCATTTTGCTGTG...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR GCA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTTATCATCCGCAGATaGCCACCAAAGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVFIIRR*PPKSKL
Trigger: CAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAA...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CCA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGCGTACCGAGGAGATATaGTTACAAACAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRRTEEI*LQTAVS
Trigger: ACTCACAGCTGTTTGTAACCATATCTCCTCGGTACG...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
3UTR CAA 72 bp AAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCATATTCTTGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: KINWYCLLQSSV*SWGVGHILGST
Trigger: AGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS GCA 90 bp CCCCCTCACGTGACGCTTGCGGGGCGCTCCCAGCTGCCAGCCCGCTaGACCTATCGCGGACTCTGTTTCGCCGACCCGGAGTTTGTCGGG +
Preference number: 5 (lower is better)
Translates to: PPHVTLAGRSQLPAR*TYRGLCFADPEFVG
Trigger: CCCGACAAACTCCGGGTCGGCGAAACAGAGTCCGCGATAGGTGCAGCGGGCTGGCAGCTGGGAGCGCCCCGCAAGCGTCACGTGAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395474.7
CDS-3UTR CAA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTTCGCCGACCCGGAGTTaGTCGGGCCCGGCGGCTCGA +
Preference number: 5 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPSPTRS*SGPAAR
Trigger: TCGAGCCGCCGGGCCCGACAAACTCCGGGTCGGCGA...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395474.7
CDS CCA 90 bp CCAGCCCGCCAACAGCCGGTCCCCCACGCACTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGAGGTTGCCCGCGGCCAAACGTAGTC +
Preference number: 5 (lower is better)
Translates to: PARQQPVPHALQTRH*EEYKLRGCPRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGGACCGGCTGTTGGCGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420783.7
ENST00000429900.6
ENST00000473238.6
ENST00000488572.6
CDS CCA 90 bp ACGCCCCGCCAACAGCCGGTCCCCCACGCACTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGAGGTTGCCCGCGGCCAAACGTAGTC +
Preference number: 5 (lower is better)
Translates to: TPRQQPVPHALQTRH*EEYKLRGCPRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGGACCGGCTGTTGGCGGGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415265.6
CDS CCA 90 bp GCAGGCCGCCAACAGCCGGTCCCCCACGCACTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGAGGTTGCCCGCGGCCAAACGTAGTC +
Preference number: 5 (lower is better)
Translates to: AGRQQPVPHALQTRH*EEYKLRGCPRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGGACCGGCTGTTGGCGGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489684.2
CDS CCA 90 bp CTCACCCGCCAACAGCCGGTCCCCCACGCACTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGAGGTTGCCCGCGGCCAAACGTAGTC +
Preference number: 5 (lower is better)
Translates to: LTRQQPVPHALQTRH*EEYKLRGCPRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGGACCGGCTGTTGGCGGGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000471162.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATACGAACGCTTCGGTGCCATCTCTGCTTGCTaGGGGGCAGCAGGTACCGAC +
Preference number: 5 (lower is better)
Translates to: PDPQALAGRPPSRYERFGAISAC*GAAGTD
Trigger: GTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGC...ACCGAAGCGTTCGTATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGGCACCAGCCCGAGCCTaGCCTCCCACCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWAPARA*PPTPGS
Trigger: GGACCCTGGGGTGGGAGGCAAGGCTCGGGCTGGTGC...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS TCA 90 bp CAGCTACAGGTAGCAGAGACCAGGGCGCCCGCGGCGGTTGTCCAATaGCGACCCTTCGTCCCACGCAATCCAGCTCATCATTGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: QLQVAETRAPAAVVQ*RPFVPRNPAHHWRG
Trigger: GCCCCGCCAATGATGAGCTGGATTGCGTGGGACGAAGGGTCGTCATTGGACAACCGCCGCGGGCGCCCTGGTCTCTGCTACCTGTAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS CCA 90 bp AGACTCCGCCAACAGCCGGTCCCCCACGCACTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGAGGTTGCCCGCGGCCAAACGTAGTC +
Preference number: 5 (lower is better)
Translates to: RLRQQPVPHALQTRH*EEYKLRGCPRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGGACCGGCTGTTGGCGGAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438660.5
ENST00000452875.5
ENST00000627177.1
CDS CCA 90 bp GAAGACCGCCAACAGCCGGTCCCCCACGCACTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGAGGTTGCCCGCGGCCAAACGTAGTC +
Preference number: 5 (lower is better)
Translates to: EDRQQPVPHALQTRH*EEYKLRGCPRPNVV
Trigger: GACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGGACCGGCTGTTGGCGGTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462064.5
CDS-3UTR CAA 90 bp TGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCAATCCAGCTCATCATaGGCGGGGCCCGCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: WPGYAGSPSTEPHLRPQRQSSSS*AGPAEG
Trigger: CCCCTCCGCGGGCCCCGCCAATGATGAGCTGGATTG...CCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR CAA 90 bp GAGTCAGGGAGGGGGTGCCAAGCCGGTAGGGAAGCCCAGGATCCACTGGAGGCTTGTGCAGGGCACCTCTaGCAGGATGCACCCTACTAC +
Preference number: 5 (lower is better)
Translates to: ESGRGCQAGREAQDPLEACAGHL*QDAPYY
Trigger: GTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACA...AGCCTCCAGTGGATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGGCCATCTCTGCTTGCTaGGGGGCAGCAGGTACCGAC +
Preference number: 5 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLAISAC*GAAGTD
Trigger: GTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGC...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACGCCATCTCTGCTTGCTaGGGGGCAGCAGGTACCGAC +
Preference number: 5 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHAISAC*GAAGTD
Trigger: GTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGC...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: AAEISRQATTPPGPDASNVCHLC*LGGSRY
Trigger: GTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACAC...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CCCGACCCCCAGGCACTCGCAGGTCGCCCACCTTCCAGATACGAACGCTTCGGTTGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: PDPQALAGRPPSRYERFGCPPPQ*TMCSFS
Trigger: CGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCA...ACCGAAGCGTTCGTATCTGGAAGGTGGGCGACCTGCGAGTGCCTGGGGGTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CCATCAGTAGCTGCGCTGCACAGGAGGAGCCTCCGCCTCTGGTTGGGTGCCTCGAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: PSVAALHRRSLRLWLGASKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...CGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CCCGCCAGGGCCCGATGCCAGCAACAGGAGCTCCTCATAACCACGCAGGGCCCACTTGGGCTTAGGATCTaGAGGCCTGTCACATGGGCA +
Preference number: 5 (lower is better)
Translates to: PARARCQQQELLITTQGPLGLRI*RPVTWA
Trigger: TGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAG...TGGGCCCTGCGTGGTTATGAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTCAATCCAGCTCATCATaGGCGGGGCCCGCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LSGASTTPLWSDVRPPAAQSSSS*AGPAEG
Trigger: CCCCTCCGCGGGCCCCGCCAATGATGAGCTGGATTG...AGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR CAA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCGGCCTACTACGGGACTaGAAGCAGAGAGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSGLLRD*KQRAET
Trigger: GGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCC...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAGGCCTACTACGGGACTaGAAGCAGAGAGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPGLLRD*KQRAET
Trigger: GGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCC...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CAGACCCTCCCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTAACACGACCTTCCCCATaGGCCATAGCACACAATCCG +
Preference number: 5 (lower is better)
Translates to: QTLPENHVWPGAATQSPVTRPSP*AIAHNP
Trigger: CGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGT...TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: THLQLLHRHQEPTATTSSVCHLC*LGGSRY
Trigger: GTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACAC...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTGCACCAGCCCGAGCCTaGCCTCCCACCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: QQALSLSGASTTPLWSDVAPARA*PPTPGS
Trigger: GGACCCTGGGGTGGGAGGCAAGGCTCGGGCTGGTGC...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGGCACCAGCCCGAGCCTaGCCTCCCACCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMAPARA*PPTPGS
Trigger: GGACCCTGGGGTGGGAGGCAAGGCTCGGGCTGGTGC...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACCGATGCCGATTGCGTaGCCGGTCCCAATACTCATC +
Preference number: 5 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPPMPIA*PVPILI
Trigger: GATGAGTATTGGGACCGGCAACGCAATCGGCATCGG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCAGCCTCCGCCTCTGGTaGGGTGCCTCGTGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLSLRLW*GASCVK
Trigger: CTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACAGCCTCCGCCTCTGGTaGGGTGCCTCGTGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHSLRLW*GASCVK
Trigger: CTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS TCA 90 bp GCCTGTCCTTTGCGACCCGGTTCTCCTTGGAGGGACCTCCACACCTaGTTTCCTGGACCTCAACCATCTCAGGAGGGGGTCTCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: ACPLRPGSPWRDLHT*FPGPQPSQEGVSAP
Trigger: AGGGGCTGAGACCCCCTCCTGAGATGGTTGAGGTCCAGGAAATCAGGTGTGGAGGTCCCTCCAAGGAGAACCGGGTCGCAAAGGACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS GCA 90 bp CACGCACTCCAGACCCGTCACTGGGAGGAGTATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTCCTCGAGAGCGTCCATGTCGATCCT +
Preference number: 5 (lower is better)
Translates to: HALQTRHWEEYKLRG*PRPNVVLESVHVDP
Trigger: AGGATCGACATGGACGCTCTCGAGGACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000420783.7
ENST00000429900.6
ENST00000438660.5
ENST00000452875.5
ENST00000462064.5
ENST00000471162.5
ENST00000473238.6
ENST00000488572.6
ENST00000489684.2
ENST00000608424.6
ENST00000610967.4
CDS CCA 90 bp TTTGCGACCCGGTTCTCCTTGGAGGGACCTCCACACCTGATTTCCTaGACCTCAACCATCTCAGGAGGGGGTCTCAGCCCCTGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: FATRFSLEGPPHLIS*TSTISGGGLSPCFP
Trigger: GGGGAAGCAGGGGCTGAGACCCCCTCCTGAGATGGTTGAGGTCCAGGAAATCAGGTGTGGAGGTCCCTCCAAGGAGAACCGGGTCGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS-3UTR CAA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGGGCGCCCGCGGCGGTaGTCCAATGACGACCCTTCG +
Preference number: 5 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTGRPRR*SNDDPS
Trigger: CGAAGGGTCGTCATTGGACAACCGCCGCGGGCGCCC...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR CAA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAGGGCGCCCGCGGCGGTaGTCCAATGACGACCCTTCG +
Preference number: 5 (lower is better)
Translates to: VSTQQNGVGRAERYRVKAGRPRR*SNDDPS
Trigger: CGAAGGGTCGTCATTGGACAACCGCCGCGGGCGCCC...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGTGCAGGGCACCTCTaGCAGGATGCACCCTACTAC +
Preference number: 5 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPCAGHL*QDAPYY
Trigger: GTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACA...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTTGACAAAGATGGCCTaGCCAGAGGGTGCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLLTKMA*PEGAAE
Trigger: CTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCTCAAGCTGTGCACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGGCCATCTCTGCTTGCTaGGGGGCAGCAGGTACCGAC +
Preference number: 5 (lower is better)
Translates to: AQAVHLPRKQGLVHSSSWAISAC*GAAGTD
Trigger: GTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGC...CCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTGCACAGCTTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp AGGTTCTGCACTCGCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACGCACCAGCCCGAGCCTaGCCTCCCACCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: RFCTRFIIRRCPPKSKLYAPARA*PPTPGS
Trigger: GGACCCTGGGGTGGGAGGCAAGGCTCGGGCTGGTGC...GTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGCGAGTGCAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCCPPPQ*TMCSFS
Trigger: CGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCA...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCTGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLCPPPQ*TMCSFS
Trigger: CGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCA...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTACCATCCGATGCCGATaGCGTTGCCGGTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPTIRCR*RCRSQY
Trigger: GTATTGGGACCGGCAACGCAATCGGCATCGGATGGT...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTAGCCTCCGCCTCTGGTaGGGTGCCTCGTGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHASLRLW*GASCVK
Trigger: CTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: TSSPQGMLSMGTDSPSLLKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...GAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCACTTGGGCTTAGGATCTaGAGGCCTGTCACATGGGCA +
Preference number: 5 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPLGLRI*RPVTWA
Trigger: TGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAG...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ACGGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCAGAGTCGGGCATATTCTaGGCAGCACTCCACTCACCT +
Preference number: 5 (lower is better)
Translates to: TATTSSPQGMLSMGTDSPESGIF*AALHSP
Trigger: AGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTC...TGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCTCGACCACACCTCTTaGGTCAGATGTTCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: THLQLLHRHQEPTATTSSLDHTS*VRCSSA
Trigger: GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCACTCGACCACACCTCTTaGGTCAGATGTTCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPLDHTS*VRCSSA
Trigger: GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCGACCACACCTCTTaGGTCAGATGTTCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHLDHTS*VRCSSA
Trigger: GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACTCCTGGGAGGCGGAGGTaGCAGGGAGCCGAGACCGTG +
Preference number: 5 (lower is better)
Translates to: LTKMALPEGAAEISRQATPGRRR*QGAETV
Trigger: CACGGTCTCGGCTCCCTGCAACCTCCGCCTCCCAGG...AGTAGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420783.7
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCAACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACC +
Preference number: 5 (lower is better)
Translates to: LLPSRHAEHGHRQPIPAPTTRSP*LPNTAT
Trigger: GGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGT...TGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTTGTGCAGGGCACCTCTaGCAGGATGCACCCTACTAC +
Preference number: 5 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHACAGHL*QDAPYY
Trigger: GTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACA...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ATGGCCCGGATCCCACGTCCCTGGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTGTCTGCTAAGGCAGTaGCTGGGTACCAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: MARIPRPWCPRKAWRISPCLLRQ*LGTRPR
Trigger: TCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACA...AGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATGGCTCCACACCAAGCAGAGGCCTACTACGGGACTaGAAGCAGAGAGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: GVPERPGGSHLHGSTPSRGLLRD*KQRAET
Trigger: GGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCC...TCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTA +
Preference number: 5 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCARVTA*SVPGLL
Trigger: TAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCGGCTGAGATCTCTAGGCAAGCTACTACCCCGCCAGGGCCCGATGCCAGCAACGCAGCAGTTGGAGTGTaGATGGGGACAACCTTGACA +
Preference number: 5 (lower is better)
Translates to: AAEISRQATTPPGPDASNAAVGV*MGTTLT
Trigger: TGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGC...GTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CGCCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RLWLGASCVKEWTLRTHRVCHLC*LGGSRY
Trigger: GTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACAC...GCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGCTGCACCAGCCCGAGCCTaGCCTCCCACCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: DGPVTQSLSLDMQVPGTAAPARA*PPTPGS
Trigger: GGACCCTGGGGTGGGAGGCAAGGCTCGGGCTGGTGC...AGCTGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCCGATGCCGATTGCGTaGCCGGTCCCAATACTCATC +
Preference number: 5 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAPMPIA*PVPILI
Trigger: GATGAGTATTGGGACCGGCAACGCAATCGGCATCGG...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCTCAAGCTGTGCACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGAGCCTCCGCCTCTGGTaGGGTGCCTCGTGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: AQAVHLPRKQGLVHSSSWSLRLW*GASCVK
Trigger: CTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT...CCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTGCACAGCTTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTTGGGCTTAGGATCTaGAGGCCTGTCACATGGGCA +
Preference number: 5 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHLGLRI*RPVTWA
Trigger: TGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAG...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTCTCGACCACACCTCTTaGGTCAGATGTTCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHALDHTS*VRCSSA
Trigger: GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAG...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TGCCACACACGGGCGCTGTGCCCAAAGCAGTGCCCAATATTCTGCACCCGACCCTGTCTGCTAAGGCAGTaGCTGGGTACCAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: CHTRALCPKQCPIFCTRPCLLRQ*LGTRPR
Trigger: TCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACA...GGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GTGCGTGAGGTGCTCCATACTGGCCTGGCTATGCTGGGTCTCCCTCCACTGAGCTGTCTGCTAAGGCAGTaGCTGGGTACCAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: VREVLHTGLAMLGLPPLSCLLRQ*LGTRPR
Trigger: TCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACA...GCTCAGTGGAGGGAGACCCAGCATAGCCAGGCCAGTATGGAGCACCTCACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGGTAGCCAGCAATCCCTaGCTTTCCAGGTATGACATG +
Preference number: 5 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRVASNP*LSRYDM
Trigger: CATGTCATACCTGGAAAGCAAGGGATTGCTGGCTAC...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTTTGATGGGGACAACCTaGACACGACCTTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPLMGTT*TRPSPL
Trigger: CAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAA...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCGCAGCAGTTGGAGTGTaGATGGGGACAACCTTGACA +
Preference number: 5 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCAAVGV*MGTTLT
Trigger: TGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGC...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GGCCACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: GHHLLPSRHAEHGHRQPIYRQRS*TKMALP
Trigger: TGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTA...GATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCCTCAAGGTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SAPAPTSGTHGHHLLPSRYRQRS*TKMALP
Trigger: TGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTA...CCTTGAGGGGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCAGAGCGCTGTGCAGGGCACCTCTaGCAGGATGCACCCTACTAC +
Preference number: 5 (lower is better)
Translates to: SSQRASQIQSDMFHRPERCAGHL*QDAPYY
Trigger: GTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACA...GCGCTCTGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHGATGL*SAKAVA
Trigger: AGCAACTGCCTTAGCAGACAACAAACCTGTAGCACC...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCGTAGCCAGCAATCCCTaGCTTTCCAGGTATGACATG +
Preference number: 5 (lower is better)
Translates to: THLQLLHRHQEPTATTSSVASNP*LSRYDM
Trigger: CATGTCATACCTGGAAAGCAAGGGATTGCTGGCTAC...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp AGGTCATCAGGCTGCATGAAGCTGGGCACTCCATATTCAGGCCCCAGGGTAATGGGCCTACTACGGGACTaGAAGCAGAGAGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: RSSGCMKLGTPYSGPRVMGLLRD*KQRAET
Trigger: GGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCC...CATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMVCHLC*LGGSRY
Trigger: GTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACAC...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGTGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLCPPPQ*TMCSFS
Trigger: CGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCA...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGG +
Preference number: 5 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPVKEWT*RTHRLW
Trigger: CCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGG +
Preference number: 5 (lower is better)
Translates to: ALHSPSAPAPTSGTHGHHVKEWT*RTHRLW
Trigger: CCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC...GTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCTGGGTCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: AGSPSTEPHLRPQRLQYLKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...CAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CGGCTTGGGGTGCTGGGGTCCGGAGTAACCATGATGCTGAAGCAGTGCATCTCAGAGTCGGGCATATTCTaGGCAGCACTCCACTCACCT +
Preference number: 5 (lower is better)
Translates to: RLGVLGSGVTMMLKQCISESGIF*AALHSP
Trigger: AGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTC...TGAGATGCACTGCTTCAGCATCATGGTTACTCCGGACCCCAGCACCCCAAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS GCA 90 bp CCTAGACAACCTTACTTCCTTTGTCTCCTGTCCCACTGGGCCCTATaGTCTCACCTTACGGCCCCATCACTACAGGCTGCAGCCACAAGG +
Preference number: 5 (lower is better)
Translates to: PRQPYFLCLLSHWAL*SHLTAPSLQAAATR
Trigger: CCTTGTGGCTGCAGCCTGTAGTGATGGGGCCGTAAGGTGAGAGCATAGGGCCCAGTGGGACAGGAGACAAAGGAAGTAAGGTTGTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492780.1
CDS-3UTR CAA 90 bp TCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCAGAGCGCGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTA +
Preference number: 5 (lower is better)
Translates to: SSQRASQIQSDMFHRPERARVTA*SVPGLL
Trigger: TAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGC...GCGCTCTGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp ATGGCCTCCAAGTCAAGGTCTCCATTAGGCTCTGGCCGTACCCGGAAGCCATGGTTGATGGGGACAACCTaGACACGACCTTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: MASKSRSPLGSGRTRKPWLMGTT*TRPSPL
Trigger: CAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAA...CCATGGCTTCCGGGTACGGCCAGAGCCTAATGGAGACCTTGACTTGGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTGCAGCTTCTGAGGCAGCAGTTGGAGTGTaGATGGGGACAACCTTGACA +
Preference number: 5 (lower is better)
Translates to: GASTTPLWSDVRPPAASEAAVGV*MGTTLT
Trigger: TGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGC...CTCAGAAGCTGCAGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CTCTGGGTCTACCTTAACCATCCGATGCCGATTGCGTTGCCGGTCCCAATACTCTTGACAAAGATGGCCTaGCCAGAGGGTGCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LWVYLNHPMPIALPVPILLTKMA*PEGAAE
Trigger: CTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA...GAGTATTGGGACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTTGACAAAGATGGCCTaGCCAGAGGGTGCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSLTKMA*PEGAAE
Trigger: CTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAYRQRS*TKMALP
Trigger: TGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTA...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGGTGTGCCATCTCTGCTaGCTTGGGGGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMVCHLC*LGGSRY
Trigger: GTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACAC...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCACACCACAAACTCATaGGCATGGAAACCCAGGATA +
Preference number: 5 (lower is better)
Translates to: TTSSPQGMLSMGTDSPSLHTTNS*AWKPRI
Trigger: TATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTG...CAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCCACACCACAAACTCATaGGCATGGAAACCCAGGATA +
Preference number: 5 (lower is better)
Translates to: LPSRHAEHGHRQPIPAPCHTTNS*AWKPRI
Trigger: TATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTG...GCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCCACACCACAAACTCATaGGCATGGAAACCCAGGATA +
Preference number: 5 (lower is better)
Translates to: STHLQLLHRHQEPTATTSHTTNS*AWKPRI
Trigger: TATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTG...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGCCGATGCCGATTGCGTaGCCGGTCCCAATACTCATC +
Preference number: 5 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSPMPIA*PVPILI
Trigger: GATGAGTATTGGGACCGGCAACGCAATCGGCATCGG...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCTTGACAAAGATGGCCTTGCCAGAGGGTGCGGCTGAGATCTCTAGGCAAGCTACCATCCGATGCCGATaGCGTTGCCGGTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: SLTKMALPEGAAEISRQATIRCR*RCRSQY
Trigger: GTATTGGGACCGGCAACGCAATCGGCATCGGATGGT...AGCTTGCCTAGAGATCTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCACCATCCGATGCCGATaGCGTTGCCGGTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLTIRCR*RCRSQY
Trigger: GTATTGGGACCGGCAACGCAATCGGCATCGGATGGT...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTGCTCCATGCTGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGG +
Preference number: 5 (lower is better)
Translates to: SPQGMLSMGTDSPSLLHAVKEWT*RTHRLW
Trigger: CCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC...AGCATGGAGCAGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: STHLQLLHRHQEPTATTSLQSSV*SWGVGH
Trigger: ATGCCCGACTCCCCATGACAAGACAGAACTTTGTAA...GGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GGTGTCCCCGAAAGGCCTGGAGGATCTCACCTTCATGGCTCCACACCAAGCAGAAATCTTAGAAAATCCTaGGTCTCGGCCGGGTGCGGT +
Preference number: 5 (lower is better)
Translates to: GVPERPGGSHLHGSTPSRNLRKS*VSAGCG
Trigger: ACCGCACCCGGCCGAGACCAAGGATTTTCTAAGATT...TCTGCTTGGTGTGGAGCCATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS CCA 90 bp CATGGGTCATTAGTGGCTTCATGTAATGACTGTTCGAGACCAGCCTaGACTCTGACACCTCAGGTCCCAGGCCTCGCCTGTCCTTTGCGA +
Preference number: 5 (lower is better)
Translates to: HGSLVASCNDCSRPA*TLTPQVPGLACPLR
Trigger: TCGCAAAGGACAGGCGAGGCCTGGGACCTGAGGTGTCAGAGTCCAGGCTGGTCTCGAACAGTCATTACATGAAGCCACTAATGACCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS CCA 90 bp CGAGGAGATATGTTCCACAGGCCAGAGCGCCAAAGCTCCCAGAAGTaGCCCTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RGDMFHRPERQSSQK*PCPQLIFTTRSPLL
Trigger: AAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAGGGCCACTTCTGGGAGCTTTGGCGCTCTGGCCTGTGGAACATATCTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCAGGACAGTGGAGTCATGGTCTAGCATGGTGGTGAGATCCCAGAAAGCCAGGACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACC +
Preference number: 5 (lower is better)
Translates to: SRTVESWSSMVVRSQKARTTRSP*LPNTAT
Trigger: GGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGT...CCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACC +
Preference number: 5 (lower is better)
Translates to: QSHSLECTWPTTGLEAESTTRSP*LPNTAT
Trigger: GGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGT...GCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTAGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: GQHVHRGQSIPLAHAAGVGATGL*SAKAVA
Trigger: AGCAACTGCCTTAGCAGACAACAAACCTGTAGCACC...TACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTA +
Preference number: 5 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLARVTA*SVPGLL
Trigger: TAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGC...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTA +
Preference number: 5 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGEARVTA*SVPGLL
Trigger: TAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGC...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCTCAAGCTGTGCACCTTCCCAGGAAACAGGGTCTGGTCCACAGCAGCAGTTGGTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: AQAVHLPRKQGLVHSSSWYRQRS*TKMALP
Trigger: TGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTA...CCAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTGCACAGCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCTACCATCCGATGCCGATaGCGTTGCCGGTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: LSLSGASTTPLWSDVRPPTIRCR*RCRSQY
Trigger: GTATTGGGACCGGCAACGCAATCGGCATCGGATGGT...AGGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAAAGCCTCCGCCTCTGGTaGGGTGCCTCGTGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKSLRLW*GASCVK
Trigger: CTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: VASPQQARRHGGIHLHCHKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: VSTQQNGVGRAERYRVKAKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGAAGGTGTGCAGGCTGTaGATACCACAGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMKVCRL*IPQLWA
Trigger: GGCCCACAGCTGTGGTATCAACAGCCTGCACACCTT...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCCTTGGGCTTAGGATCTaGAGGCCTGTCACATGGGCA +
Preference number: 5 (lower is better)
Translates to: QSHSLECTWPTTGLEAESLGLRI*RPVTWA
Trigger: TGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAG...GCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCTTGGGCTTAGGATCTaGAGGCCTGTCACATGGGCA +
Preference number: 5 (lower is better)
Translates to: AQHGFQLLLQPGTHPGGELGLRI*RPVTWA
Trigger: TGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAG...CTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGCTTGGGCTTAGGATCTaGAGGCCTGTCACATGGGCA +
Preference number: 5 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMLGLRI*RPVTWA
Trigger: TGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAG...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGTCCGCCGAGTCGGGCATATTCTaGGCAGCACTCCACTCACCT +
Preference number: 5 (lower is better)
Translates to: PFSFRSLDHTSLVRCSSAESGIF*AALHSP
Trigger: AGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTC...GGCGGACGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS CCA 90 bp AGAACGCATCCTAGACAACCTTACTTCCTTTGTCTCCTGTCCCACTaGGCCCTATGCTCTCACCTTACGGCCCCATCACTACAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RTHPRQPYFLCLLSH*ALCSHLTAPSLQAA
Trigger: TGCAGCCTGTAGTGATGGGGCCGTAAGGTGAGAGCATAGGGCCCAGTGGGACAGGAGACAAAGGAAGTAAGGTTGTCTAGGATGCGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492780.1
CDS-3UTR CAA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGTGTGCAGGGCACCTCTaGCAGGATGCACCCTACTAC +
Preference number: 5 (lower is better)
Translates to: STQQNGVGRAERYRVKAKCAGHL*QDAPYY
Trigger: GTAGTAGGGTGCATCCTGCAAGAGGTGCCCTGCACA...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTGGTAGCCAGCAATCCCTaGCTTTCCAGGTATGACATG +
Preference number: 5 (lower is better)
Translates to: AIHEGGFTMPQTPEGQPLVASNP*LSRYDM
Trigger: CATGTCATACCTGGAAAGCAAGGGATTGCTGGCTAC...CAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp TGTGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAGCCAGAGTCACAGCCTaGAGTGTACCTGGCCTACTA +
Preference number: 5 (lower is better)
Translates to: CAASRVTEGSTPQTHWHGARVTA*SVPGLL
Trigger: TAGTAGGCCAGGTACACTCAAGGCTGTGACTCTGGC...TCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAACACGACCTTCCCCATaGGCCATAGCACACAATCCG +
Preference number: 5 (lower is better)
Translates to: HGFQLLLQPGTHPGGEHTTRPSP*AIAHNP
Trigger: CGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGT...TGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACACACGACCTTCCCCATaGGCCATAGCACACAATCCG +
Preference number: 5 (lower is better)
Translates to: VASPQQARRHGGIHLHCHTRPSP*AIAHNP
Trigger: CGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGT...GTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CAGAGTCACAGCCTTGAGTGTACCTGGCCTACTACGGGACTTGAAGCAGAGAGCTTGATGGGGACAACCTaGACACGACCTTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: QSHSLECTWPTTGLEAESLMGTT*TRPSPL
Trigger: CAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAA...GCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp GCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCGGCAGCAGTTGGAGTGTaGATGGGGACAACCTTGACA +
Preference number: 5 (lower is better)
Translates to: AGPFSFRSLDHTSLVRCSAAVGV*MGTTLT
Trigger: TGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGC...CGAACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GTGCTATTCATGAAGGTGGGTTCACCATGCCCCAGACGCCAGAAGGTCAGCCGTTACCGACAACGTTCCTaGACAAAGATGGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: VLFMKVGSPCPRRQKVSRYRQRS*TKMALP
Trigger: TGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTA...ACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCACCTTCATGAATAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp TGCAGCTTCTCGTGTGACCGAGGGTTCCACACCACAAACTCATTGGCATGGAAACCGATGCCGATTGCGTaGCCGGTCCCAATACTCATC +
Preference number: 5 (lower is better)
Translates to: CSFSCDRGFHTTNSLAWKPMPIA*PVPILI
Trigger: GATGAGTATTGGGACCGGCAACGCAATCGGCATCGG...TTTCCATGCCAATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGCCGATGCCGATTGCGTaGCCGGTCCCAATACTCATC +
Preference number: 5 (lower is better)
Translates to: STQQNGVGRAERYRVKAKPMPIA*PVPILI
Trigger: GATGAGTATTGGGACCGGCAACGCAATCGGCATCGG...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp AGGTTCTGCACTCGCTTTATCATCCGCAGATGCCCACCAAAGTCCAAGCTGTACACCATCCGATGCCGATaGCGTTGCCGGTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: RFCTRFIIRRCPPKSKLYTIRCR*RCRSQY
Trigger: GTATTGGGACCGGCAACGCAATCGGCATCGGATGGT...GTACAGCTTGGACTTTGGTGGGCATCTGCGGATGATAAAGCGAGTGCAGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CCGGAGAATCACGTGTGGCCGGGTGCAGCCACCCAGAGCCCTGTACAGCATGACACACAATCCTGCAGCTaGAATCTTAGAAAATCCTTG +
Preference number: 5 (lower is better)
Translates to: PENHVWPGAATQSPVQHDTQSCS*NLRKSL
Trigger: CAAGGATTTTCTAAGATTCAAGCTGCAGGATTGTGT...GTCATGCTGTACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CAA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACC +
Preference number: 5 (lower is better)
Translates to: STQQNGVGRAERYRVKAKTTRSP*LPNTAT
Trigger: GGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGT...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTTGTCTGCTAAGGCAGTaGCTGGGTACCAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: QQALSLSGASTTPLWSDVCLLRQ*LGTRPR
Trigger: TCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACA...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CCTCTGGTTGGGTGCCTCGTGTGTAAAGGAGTGGACCTTGAGGACACATCGCTTGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: PLVGCLVCKGVDLEDTSLGATGL*SAKAVA
Trigger: AGCAACTGCCTTAGCAGACAACAAACCTGTAGCACC...AAGCGATGTGTCCTCAAGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp TCTCCCTCCACTGAGCCACATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTGATGGGGACAACCTaGACACGACCTTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: SPSTEPHLRPQRLQYLGMLMGTT*TRPSPL
Trigger: CAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAA...CATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATGTGGCTCAGTGGAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACCAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGG +
Preference number: 5 (lower is better)
Translates to: TSRPFLFQEPRPHLFGQMVKEWT*RTHRLW
Trigger: CCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC...CATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GTGAGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAGTAGCCAGCAATCCCTaGCTTTCCAGGTATGACATG +
Preference number: 5 (lower is better)
Translates to: VSTQQNGVGRAERYRVKAVASNP*LSRYDM
Trigger: CATGTCATACCTGGAAAGCAAGGGATTGCTGGCTAC...TGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACGGCCTACTACGGGACTaGAAGCAGAGAGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: FVTKFCLVMGSRAYSWQHGLLRD*KQRAET
Trigger: GGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCC...GTGCTGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGAAACACGACCTTCCCCATaGGCCATAGCACACAATCCG +
Preference number: 5 (lower is better)
Translates to: TQQNGVGRAERYRVKAKETRPSP*AIAHNP
Trigger: CGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGT...TTCCTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACTTGACAAAGATGGCCTaGCCAGAGGGTGCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: KRWASDSVSVSRYASSWYLTKMA*PEGAAE
Trigger: CTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCCATCTCTGCTTGCTaGGGGGCAGCAGGTACCGAC +
Preference number: 5 (lower is better)
Translates to: TVCYKVLSCHGESGIFLAAISAC*GAAGTD
Trigger: GTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGC...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp GCTGGTAGTAGGCTCCATCACGCCCTGTGGTATACACATAGCCACCATGGCATGCACACCACAAACTCATaGGCATGGAAACCCAGGATA +
Preference number: 5 (lower is better)
Translates to: AGSRLHHALWYTHSHHGMHTTNS*AWKPRI
Trigger: TATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTG...CATGCCATGGTGGCTATGTGTATACCACAGGGCGTGATGGAGCCTACTACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp AAGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACACCATCCGATGCCGATaGCGTTGCCGGTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: KRWASDSVSVSRYASSWYTIRCR*RCRSQY
Trigger: GTATTGGGACCGGCAACGCAATCGGCATCGGATGGT...GTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CACTCCACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCCACGGCCAAAATAAATaGGTACTGTTTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: HSTHLQLLHRHQEPTATTHGQNK*VLFVTK
Trigger: CTTTGTAACAAACAGTACCAATTTATTTTGGCCGTG...GGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGTGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ACTCACCTTCAGCTCCTGCACCGACATCAGGAACCCACGGCCACCACCTCCTCCCACGGCCAAAATAAATaGGTACTGTTTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: THLQLLHRHQEPTATTSSHGQNK*VLFVTK
Trigger: CTTTGTAACAAACAGTACCAATTTATTTTGGCCGTG...GGAGGAGGTGGTGGCCGTGGGTTCCTGATGTCGGTGCAGGAGCTGAAGGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CACCACCTCCTCCCCTCAAGGCATGCTGAGCATGGGCACAGACAGCCCATCCCTCACGGCCAAAATAAATaGGTACTGTTTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: HHLLPSRHAEHGHRQPIPHGQNK*VLFVTK
Trigger: CTTTGTAACAAACAGTACCAATTTATTTTGGCCGTG...AGGGATGGGCTGTCTGTGCCCATGCTCAGCATGCCTTGAGGGGAGGAGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: STQQNGVGRAERYRVKAKGATGL*SAKAVA
Trigger: AGCAACTGCCTTAGCAGACAACAAACCTGTAGCACC...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp AGCACACAGCAAAATGGGGTGGGACGTGCAGAGAGGTATAGGGTAAAGGCAAAGGTAGCCAGCAATCCCTaGCTTTCCAGGTATGACATG +
Preference number: 5 (lower is better)
Translates to: STQQNGVGRAERYRVKAKVASNP*LSRYDM
Trigger: CATGTCATACCTGGAAAGCAAGGGATTGCTGGCTAC...CTTTGCCTTTACCCTATACCTCTCTGCACGTCCCACCCCATTTTGCTGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAACACGACCTTCCCCATaGGCCATAGCACACAATCCG +
Preference number: 5 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTTRPSP*AIAHNP
Trigger: CGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGT...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TTTCCCTCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCACACACCACAAACTCATaGGCATGGAAACCCAGGATA +
Preference number: 5 (lower is better)
Translates to: FPSSQRASQIQSDMFHRPHTTNS*AWKPRI
Trigger: TATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTG...TGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp CTGTCCCCAGCTAATTTTCACAACTCGGAGTCCCTTGCTTCCAAACACAGCCACGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGG +
Preference number: 5 (lower is better)
Translates to: LSPANFHNSESLASKHSHVKEWT*RTHRLW
Trigger: CCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC...GTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAGCTGGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420783.7
ENST00000452875.5
CDS-3UTR CAA 90 bp TTTCAGCTCCTACTACAACCGGGTACACATCCTGGGGGTGAGCACACAGCAAAAGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGG +
Preference number: 5 (lower is better)
Translates to: FQLLLQPGTHPGGEHTAKVKEWT*RTHRLW
Trigger: CCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC...TTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTTGTAGTAGGAGCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TTTCCCTCAAGCCAGCGTGCATCCCAAATCCAGTCAGACATGTTCCACAGGCCATTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: FPSSQRASQIQSDMFHRPLQSSV*SWGVGH
Trigger: ATGCCCGACTCCCCATGACAAGACAGAACTTTGTAA...TGGCCTGTGGAACATGTCTGACTGGATTTGGGATGCACGCTGGCTTGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452875.5
CDS-3UTR CAA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACATTGATGGGGACAACCTaGACACGACCTTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTLMGTT*TRPSPL
Trigger: CAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAA...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCCACACCACAAACTCATaGGCATGGAAACCCAGGATA +
Preference number: 5 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSHTTNS*AWKPRI
Trigger: TATCCTGGGTTTCCATGCCAATGAGTTTGTGGTGTG...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCATGCCCTCCACCACAGTaGACGATGTGCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: TVCYKVLSCHGESGIFLACPPPQ*TMCSFS
Trigger: CGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCA...TGCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTCCGATGCCGATTGCGTaGCCGGTCCCAATACTCATC +
Preference number: 5 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTPMPIA*PVPILI
Trigger: GATGAGTATTGGGACCGGCAACGCAATCGGCATCGG...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCCCGATGCCGATTGCGTaGCCGGTCCCAATACTCATC +
Preference number: 5 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGPMPIA*PVPILI
Trigger: GATGAGTATTGGGACCGGCAACGCAATCGGCATCGG...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCAGCCTCCGCCTCTGGTaGGGTGCCTCGTGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFSLRLW*GASCVK
Trigger: CTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp TCCTGGTACAGCTCAGCATGGATTTCAGCTCCTACTACAACCGGGTACACATCCTTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: SWYSSAWISAPTTTGYTSLQSSV*SWGVGH
Trigger: ATGCCCGACTCCCCATGACAAGACAGAACTTTGTAA...GGATGTGTACCCGGTTGTAGTAGGAGCTGAAATCCATGCTGAGCTGTACCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp AGAGATGGGCCAGTGACTCAGTCTCTGTCTCTAGATATGCAAGTTCCTGGTACAGGTGCTACAGGTTTGTaGTCTGCTAAGGCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: RDGPVTQSLSLDMQVPGTGATGL*SAKAVA
Trigger: AGCAACTGCCTTAGCAGACAACAAACCTGTAGCACC...TGTACCAGGAACTTGCATATCTAGAGACAGAGACTGAGTCACTGGCCCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp TACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCTTGGCTGTCTGCTAAGGCAGTaGCTGGGTACCAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: YCLLQSSVLSWGVGHILGCLLRQ*LGTRPR
Trigger: TCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACA...GCCAAGAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp CAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGAGCCTCCGCCTCTGGTaGGGTGCCTCGTGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: QNKLVLFVTKFCLVMGSRSLRLW*GASCVK
Trigger: CTTTACACACGAGGCACCCAACCAGAGGCGGAGGCT...CCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCGAGTCGGGCATATTCTaGGCAGCACTCCACTCACCT +
Preference number: 5 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFESGIF*AALHSP
Trigger: AGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTC...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CTTGTCATGGGGAGTCGGGCATATTCTTGGCAGCACTCCACTCACCTTCAGCTCCACGGCCAAAATAAATaGGTACTGTTTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: LVMGSRAYSWQHSTHLQLHGQNK*VLFVTK
Trigger: CTTTGTAACAAACAGTACCAATTTATTTTGGCCGTG...GAGCTGAAGGTGAGTGGAGTGCTGCCAAGAATATGCCCGACTCCCCATGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS TCA 90 bp CAGGGAAGAGATGGGGATCAGGGAAACTTCTCGGCATGTAGCCTATaGATGCATCAGGACACACAATCCTGCAGCTTGAATCTTAGAAAA +
Preference number: 5 (lower is better)
Translates to: QGRDGDQGNFSACSL*MHQDTQSCSLNLRK
Trigger: TTTTCTAAGATTCAAGCTGCAGGATTGTGTGTCCTGATGCATTCATAGGCTACATGCCGAGAAGTTTCCCTGATCCCCATCTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419837.1
ENST00000429900.6
ENST00000452875.5
CDS-3UTR CAA 90 bp CAGCAGGCCCTTTCTCTTTCAGGAGCCTCGACCACACCTCTTTGGTCAGATGTTCACGGCCAAAATAAATaGGTACTGTTTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: QQALSLSGASTTPLWSDVHGQNK*VLFVTK
Trigger: CTTTGTAACAAACAGTACCAATTTATTTTGGCCGTG...AACATCTGACCAAAGAGGTGTGGTCGAGGCTCCTGAAAGAGAAAGGGCCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTTTGACAAAGATGGCCTaGCCAGAGGGTGCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLLTKMA*PEGAAE
Trigger: CTCAGCCGCACCCTCTGGCAAGGCCATCTTTGTCAA...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS-3UTR CAA 90 bp ATTGGTACTGTTTGTTACAAAGTTCTGTCTTGTCATGGGGAGTCGGGCATATTCGTAAAGGAGTGGACCTaGAGGACACATCGCTTATGG +
Preference number: 5 (lower is better)
Translates to: IGTVCYKVLSCHGESGIFVKEWT*RTHRLW
Trigger: CCATAAGCGATGTGTCCTCAAGGTCCACTCCTTTAC...GAATATGCCCGACTCCCCATGACAAGACAGAACTTTGTAACAAACAGTACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp CATTTAAGGCCACAGAGGCTCCAATACCTGGGAATGTTCACAAAGTCATCAACTTTACAAAGTTCTGTCTaGTCATGGGGAGTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: HLRPQRLQYLGMFTKSSTLQSSV*SWGVGH
Trigger: ATGCCCGACTCCCCATGACAAGACAGAACTTTGTAA...AGTTGATGACTTTGTGAACATTCCCAGGTATTGGAGCCTCTGTGGCCTTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp AAGCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCACAACTCGGAGTCCCTaGCTTCCAAACACAGCCACC +
Preference number: 5 (lower is better)
Translates to: KQKPTAKINWYCLLQSSVTTRSP*LPNTAT
Trigger: GGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGT...GACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTCTTGGGCTTAGGATCTaGAGGCCTGTCACATGGGCA +
Preference number: 5 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLLGLRI*RPVTWA
Trigger: TGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAG...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
ENST00000615452.1
CDS-3UTR CAA 90 bp GCAAAAACCCACGGCCAAAATAAATTGGTACTGTTTGTTACAAAGTTCTGTCTTGCAGCAGTTGGAGTGTaGATGGGGACAACCTTGACA +
Preference number: 5 (lower is better)
Translates to: AKTHGQNKLVLFVTKFCLAAVGV*MGTTLT
Trigger: TGTCAAGGTTGTCCCCATCAACACTCCAACTGCTGC...AAGACAGAACTTTGTAACAAACAGTACCAATTTATTTTGGCCGTGGGTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395474.7
ENST00000452875.5
ENST00000608424.6
ENST00000610967.4
CDS GCA 72 bp GTGACGCTTGCGGGGCGCTCCCAGCTGCCAGCCCGCTaGACCTATCGCGGACTCTGTTTCGCCGACCCGGAG +
Preference number: 6 (lower is better)
Translates to: VTLAGRSQLPAR*TYRGLCFADPE
Trigger: CTCCGGGTCGGCGAAACAGAGTCCGCGATAGGTGCAGCGGGCTGGCAGCTGGGAGCGCCCCGCAAGCGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395474.7
CDS CCA 72 bp CAACAGCCGGTCCCCCACGCACTCCAGACCCGTCACTaGGAGGAGTATAAGCTCCGAGGTTGCCCGCGGCCA +
Preference number: 6 (lower is better)
Translates to: QQPVPHALQTRH*EEYKLRGCPRP
Trigger: TGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGGACCGGCTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000420783.7
ENST00000429900.6
ENST00000438660.5
ENST00000452875.5
ENST00000462064.5
ENST00000471162.5
ENST00000473238.6
ENST00000488572.6
ENST00000489684.2
ENST00000608424.6
ENST00000610967.4
ENST00000627177.1
CDS GCA 72 bp ACTCTCGCGAGAACGAGCCTTCCCAGCGCGCCGCGCTaGCCATCAACAGCGCCCTCAGCTACAGGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: TLARTSLPSAPR*PSTAPSATGSR
Trigger: TCTGCTACCTGTAGCTGAGGGCGCTGTTGATGGGCAGCGCGGCGCGCTGGGAAGGCTCGTTCTCGCGAGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS GCA 72 bp CACCACACACCAGGAAGTCACCCCGCCAGGGCCCGATaGCAGCAACAGGAGCTCCTCATAACCACGCAGGGC +
Preference number: 6 (lower is better)
Translates to: HHTPGSHPARAR*QQQELLITTQG
Trigger: GCCCTGCGTGGTTATGAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGGGTGACTTCCTGGTGTGTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489684.2
CDS CAA 72 bp ACTCTGACACCTCAGGTCCCAGGCCTCGCCTGTCCTTaGCGACCCGGTTCTCCTTGGAGGGACCTCCACACC +
Preference number: 6 (lower is better)
Translates to: TLTPQVPGLACP*RPGSPWRDLHT
Trigger: GGTGTGGAGGTCCCTCCAAGGAGAACCGGGTCGCAAAGGACAGGCGAGGCCTGGGACCTGAGGTGTCAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS TCA 72 bp GTAGCAGAGACCAGGGCGCCCGCGGCGGTTGTCCAATaGCGACCCTTCGTCCCACGCAATCCAGCTCATCAT +
Preference number: 6 (lower is better)
Translates to: VAETRAPAAVVQ*RPFVPRNPAHH
Trigger: ATGATGAGCTGGATTGCGTGGGACGAAGGGTCGTCATTGGACAACCGCCGCGGGCGCCCTGGTCTCTGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395474.7
ENST00000610967.4
CDS CAA 72 bp CCCAGGCCTCGCCTGTCCTTTGCGACCCGGTTCTCCTaGGAGGGACCTCCACACCTGATTTCCTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: PRPRLSFATRFS*EGPPHLISWTS
Trigger: TGAGGTCCAGGAAATCAGGTGTGGAGGTCCCTCCAAGGAGAACCGGGTCGCAAAGGACAGGCGAGGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS GCA 72 bp CAGACCCGTCACTGGGAGGAGTATAAGCTCCGAGGTTaGCCGCGGCCAAACGTAGTCCTCGAGAGCGTCCAT +
Preference number: 6 (lower is better)
Translates to: QTRHWEEYKLRG*PRPNVVLESVH
Trigger: ATGGACGCTCTCGAGGACTACGTTTGGCCGCGGGCAACCTCGGAGCTTATACTCCTCCCAGTGACGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000395474.7
ENST00000415265.6
ENST00000420783.7
ENST00000429900.6
ENST00000438660.5
ENST00000452875.5
ENST00000462064.5
ENST00000471162.5
ENST00000473238.6
ENST00000488572.6
ENST00000489684.2
ENST00000608424.6
ENST00000610967.4
ENST00000627177.1
CDS CCA 72 bp CGGTTCTCCTTGGAGGGACCTCCACACCTGATTTCCTaGACCTCAACCATCTCAGGAGGGGGTCTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: RFSLEGPPHLIS*TSTISGGGLSP
Trigger: GGGGCTGAGACCCCCTCCTGAGATGGTTGAGGTCCAGGAAATCAGGTGTGGAGGTCCCTCCAAGGAGAACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS CAA 90 bp ACCTCAGGTCCCAGGCCTCGCCTGTCCTTTGCGACCCGGTTCTCCTaGGAGGGACCTCCACACCTGATTTCCTGGACCTCAACCATCTCA +
Preference number: 6 (lower is better)
Translates to: TSGPRPRLSFATRFS*EGPPHLISWTSTIS
Trigger: TGAGATGGTTGAGGTCCAGGAAATCAGGTGTGGAGGTCCCTCCAAGGAGAACCGGGTCGCAAAGGACAGGCGAGGCCTGGGACCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS TCA 72 bp CACCCTCTTAGGACTGGTGGCAACTCACTCAAGGCCTaGCCGCCAAGGCCCTGCCTCAGGACCCTTATACAA +
Preference number: 6 (lower is better)
Translates to: HPLRTGGNSLKA*PPRPCLRTLIQ
Trigger: TTGTATAAGGGTCCTGAGGCAGGGCCTTGGCGGTCAGGCCTTGAGTGAGTTGCCACCAGTCCTAAGAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS TCA 72 bp CTTCATGTAATGACTGTTCGAGACCAGCCTGGACTCTaGCACCTCAGGTCCCAGGCCTCGCCTGTCCTTTGC +
Preference number: 6 (lower is better)
Translates to: LHVMTVRDQPGL*HLRSQASPVLC
Trigger: GCAAAGGACAGGCGAGGCCTGGGACCTGAGGTGTCAGAGTCCAGGCTGGTCTCGAACAGTCATTACATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS CCA 72 bp TTAGTGGCTTCATGTAATGACTGTTCGAGACCAGCCTaGACTCTGACACCTCAGGTCCCAGGCCTCGCCTGT +
Preference number: 6 (lower is better)
Translates to: LVASCNDCSRPA*TLTPQVPGLAC
Trigger: ACAGGCGAGGCCTGGGACCTGAGGTGTCAGAGTCCAGGCTGGTCTCGAACAGTCATTACATGAAGCCACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491365.1
CDS CCA 72 bp CCTAGACAACCTTACTTCCTTTGTCTCCTGTCCCACTaGGCCCTATGCTCTCACCTTACGGCCCCATCACTA +
Preference number: 6 (lower is better)
Translates to: PRQPYFLCLLSH*ALCSHLTAPSL
Trigger: TAGTGATGGGGCCGTAAGGTGAGAGCATAGGGCCCAGTGGGACAGGAGACAAAGGAAGTAAGGTTGTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492780.1