Pregenerated sensors for WDR5B-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272758Ensembl transcript IDs: ENST00000608346.1, ENST00000608465.5, ENST00000608756.5, ENST00000609469.5, ENST00000667395.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCATGGGACCCGCTGAGCCAGGCATGGGAGAGCAATCTCCTCGTCTaGCATTTGCTAAGACTGTGGGAAAAGCACAGTGTTTGGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: AWDPLSQAWESNLLV*HLLRLWEKHSVWAG Trigger: CCCCGCCCAAACACTGTGCTTTTCCCACAGTCTTAGCAAATGGCAGACGAGGAGATTGCTCTCCCATGCCTGGCTCAGCGGGTCCCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS GCA 90 bp | GTGATGCAGAAATCACCCGTCTTCTGCGTCGATCACTCTGGGAGCTaGAGACCAGAGCTGTTCCTATTCAGCTATCTTGGAACGGAACCC | + |
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Preference number: 5 (lower is better) Translates to: VMQKSPVFCVDHSGS*RPELFLFSYLGTEP Trigger: GGGTTCCGTTCCAAGATAGCTGAATAGGAACAGCTCTGGTCTGCAGCTCCCAGAGTGATCGACGCAGAAGACGGGTGATTTCTGCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS GCA 90 bp | ATGAATCAGGTACCTCAGTTGGTGATGCAGAAATCACCCGTCTTCTaGGTCGATCACTCTGGGAGCTGCAGACCAGAGCTGTTCCTATTC | + |
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Preference number: 5 (lower is better) Translates to: MNQVPQLVMQKSPVF*VDHSGSCRPELFLF Trigger: GAATAGGAACAGCTCTGGTCTGCAGCTCCCAGAGTGATCGACGCAGAAGACGGGTGATTTCTGCATCACCAACTGAGGTACCTGATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CCA 90 bp | TCAGTTGGTGATGCAGAAATCACCCGTCTTCTGCGTCGATCACTCTaGGAGCTGCAGACCAGAGCTGTTCCTATTCAGCTATCTTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SVGDAEITRLLRRSL*ELQTRAVPIQLSWN Trigger: GTTCCAAGATAGCTGAATAGGAACAGCTCTGGTCTGCAGCTCCCAGAGTGATCGACGCAGAAGACGGGTGATTTCTGCATCACCAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS GCA 90 bp | GTTTTCCATAATACTGTTTGCGCTCATTTGCTTGCCTTGCGCACCTaGTCTCTTACACACATCTGGAAAACCTCCGGCTCTCTGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VFHNTVCAHLLALRT*SLTHIWKTSGSLWW Trigger: CCACCACAGAGAGCCGGAGGTTTTCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 90 bp | TGCGCTCATTTGCTTGCCTTGCGCACCTGCTCTCTTACACACATCTaGAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAA | + |
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Preference number: 5 (lower is better) Translates to: CAHLLALRTCSLTHI*KTSGSLWWNTLLIK Trigger: TTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS TCA 90 bp | TACATCTTCCAACAGTGTGAGGCTCCTATGGAAGGTTTCCAGCTTTaGAGCAATACTCTGCTTTCACGTACCTGTGTCAGACCAGGCTAC | + |
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Preference number: 5 (lower is better) Translates to: YIFQQCEAPMEGFQL*SNTLLSRTCVRPGY Trigger: GTAGCCTGGTCTGACACAGGTACGTGAAAGCAGAGTATTGCTTCAAAGCTGGAAACCTTCCATAGGAGCCTCACACTGTTGGAAGATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 90 bp | GTGAGCCATCATGCCCGACGAGCAGCTTATAAGATTGTTGCTTTGTaGACTGAATGTAGGCATTCATCAGATGCTAGTTTTGAGTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: VSHHARRAAYKIVAL*TECRHSSDASFECS Trigger: GGAACACTCAAAACTAGCATCTGATGAATGCCTACATTCAGTCCACAAAGCAACAATCTTATAAGCTGCTCGTCGGGCATGATGGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608346.1 |
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| CDS TCA 90 bp | GATTACCTGGTGGCTTTTTCTAGCCAGATTTGCATTAATCCTTACTaGGATTGGATGGTTTTCTTTCCTCTATTGGCGCCATTCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: DYLVAFSSQICINPY*DWMVFFPLLAPFFR Trigger: TCTGAAGAATGGCGCCAATAGAGGAAAGAAAACCATCCAATCTCAGTAAGGATTAATGCAAATCTGGCTAGAAAAAGCCACCAGGTAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 90 bp | GTATACTTCAGAGTACTTTTCATGAGTTCTTCCACAGTGAACCCTTaGATTACCTGGTGGCTTTTTCTAGCCAGATTTGCATTAATCCTT | + |
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Preference number: 5 (lower is better) Translates to: VYFRVLFMSSSTVNP*ITWWLFLARFALIL Trigger: AAGGATTAATGCAAATCTGGCTAGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTACTCTGAAGTATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 90 bp | TTTGCATTAATCCTTACTGAGATTGGATGGTTTTCTTTCCTCTATTaGCGCCATTCTTCAGATATTAAAGTTAAACCATCCACTCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: FALILTEIGWFSFLY*RHSSDIKVKPSTPS Trigger: TGAGGGAGTGGATGGTTTAACTTTAATATCTGAAGAATGGCGCCAATAGAGGAAAGAAAACCATCCAATCTCAGTAAGGATTAATGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS GCA 72 bp | TTCCTGGGTGAGGCGACGCCCTGTCATGCTTCACCTTaGCCTCCGTGGGCTGCACCCACTGTCCAACCAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLGEATPCHASP*PPWAAPTVQPV Trigger: GACTGGTTGGACAGTGGGTGCAGCCCACGGAGGGCAAGGTGAAGCATGACAGGGCGTCGCCTCACCCAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CCA 72 bp | GAGGCGACGCCCTGTCATGCTTCACCTTGCCCTCCGTaGGCTGCACCCACTGTCCAACCAGTCCCAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: EATPCHASPCPP*AAPTVQPVPVR Trigger: TCTCACTGGGACTGGTTGGACAGTGGGTGCAGCCCACGGAGGGCAAGGTGAAGCATGACAGGGCGTCGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS TCA 72 bp | GAAAGGAAAATCCCCCGACCCATTGTGCTTCCTGGGTaGGGCGACGCCCTGTCATGCTTCACCTTGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ERKIPRPIVLPG*GDALSCFTLPS Trigger: GGAGGGCAAGGTGAAGCATGACAGGGCGTCGCCTCACCCAGGAAGCACAATGGGTCGGGGGATTTTCCTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CAA 90 bp | GACCCGCTGAGCCAGGCATGGGAGAGCAATCTCCTCGTCTGCCATTaGCTAAGACTGTGGGAAAAGCACAGTGTTTGGGCGGGGTGTACT | + |
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Preference number: 6 (lower is better) Translates to: DPLSQAWESNLLVCH*LRLWEKHSVWAGCT Trigger: AGTACACCCCGCCCAAACACTGTGCTTTTCCCACAGTCTTAGCAAATGGCAGACGAGGAGATTGCTCTCCCATGCCTGGCTCAGCGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS GCA 72 bp | CCGCTGAGCCAGGCATGGGAGAGCAATCTCCTCGTCTaGCATTTGCTAAGACTGTGGGAAAAGCACAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: PLSQAWESNLLV*HLLRLWEKHSV Trigger: AACACTGTGCTTTTCCCACAGTCTTAGCAAATGGCAGACGAGGAGATTGCTCTCCCATGCCTGGCTCAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CAA 72 bp | AGCCAGGCATGGGAGAGCAATCTCCTCGTCTGCCATTaGCTAAGACTGTGGGAAAAGCACAGTGTTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: SQAWESNLLVCH*LRLWEKHSVWA Trigger: CGCCCAAACACTGTGCTTTTCCCACAGTCTTAGCAAATGGCAGACGAGGAGATTGCTCTCCCATGCCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CCA 72 bp | GATGCAGAAATCACCCGTCTTCTGCGTCGATCACTCTaGGAGCTGCAGACCAGAGCTGTTCCTATTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: DAEITRLLRRSL*ELQTRAVPIQL Trigger: TAGCTGAATAGGAACAGCTCTGGTCTGCAGCTCCCAGAGTGATCGACGCAGAAGACGGGTGATTTCTGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CCA 72 bp | TTGCTTGCCTTGCGCACCTGCTCTCTTACACACATCTaGAAAACCTCCGGCTCTCTGTGGTGGAATACCCTT | + |
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Preference number: 6 (lower is better) Translates to: LLALRTCSLTHI*KTSGSLWWNTL Trigger: AAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 90 bp | ATTACTTCGGGACCGAAGATGAAGACAGCAGCATTGCACCCCAGGTaGACCTTAACCAGCAGCAGTACATCTTCCAACAGTGTGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ITSGPKMKTAALHPR*TLTSSSTSSNSVRL Trigger: GAGCCTCACACTGTTGGAAGATGTACTGCTGCTGGTTAAGGTCAACCTGGGGTGCAATGCTGCTGTCTTCATCTTCGGTCCCGAAGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 72 bp | GGACCGAAGATGAAGACAGCAGCATTGCACCCCAGGTaGACCTTAACCAGCAGCAGTACATCTTCCAACAGT | + |
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Preference number: 6 (lower is better) Translates to: GPKMKTAALHPR*TLTSSSTSSNS Trigger: ACTGTTGGAAGATGTACTGCTGCTGGTTAAGGTCAACCTGGGGTGCAATGCTGCTGTCTTCATCTTCGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS GCA 72 bp | AATACTGTTTGCGCTCATTTGCTTGCCTTGCGCACCTaGTCTCTTACACACATCTGGAAAACCTCCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: NTVCAHLLALRT*SLTHIWKTSGS Trigger: AGAGCCGGAGGTTTTCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 90 bp | GGTGTGAGCCATCATGCCCGACGAGCAGCTTATAAGATTGTTGCTTaGTGGACTGAATGTAGGCATTCATCAGATGCTAGTTTTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: GVSHHARRAAYKIVA*WTECRHSSDASFEC Trigger: ACACTCAAAACTAGCATCTGATGAATGCCTACATTCAGTCCACAAAGCAACAATCTTATAAGCTGCTCGTCGGGCATGATGGCTCACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608346.1 |
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| CDS CAA 90 bp | TTCTCAAATGTTTTCCATAATACTGTTTGCGCTCATTTGCTTGCCTaGCGCACCTGCTCTCTTACACACATCTGGAAAACCTCCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FSNVFHNTVCAHLLA*RTCSLTHIWKTSGS Trigger: AGAGCCGGAGGTTTTCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAACATTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 72 bp | GAGCTGCAGACCAGAGCTGTTCCTATTCAGCTATCTTaGAACGGAACCCAGCCATTTCTTTTTAATCATCAC | + |
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Preference number: 6 (lower is better) Translates to: ELQTRAVPIQLS*NGTQPFLFNHH Trigger: GTGATGATTAAAAAGAAATGGCTGGGTTCCGTTCCAAGATAGCTGAATAGGAACAGCTCTGGTCTGCAGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CAA 72 bp | GTTTTCCATAATACTGTTTGCGCTCATTTGCTTGCCTaGCGCACCTGCTCTCTTACACACATCTGGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: VFHNTVCAHLLA*RTCSLTHIWKT Trigger: GGTTTTCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS GCA 72 bp | TTTTCCATAATACTGTTTGCGCTCATTTGCTTGCCTTaGGCACCTGCTCTCTTACACACATCTGGAAAACCT | + |
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Preference number: 6 (lower is better) Translates to: FSIILFALICLP*APALLHTSGKP Trigger: AGGTTTTCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 72 bp | CGGCCCACTCTCTTTTACGGAAAAATCCCTAGGCTTTaGAGATCCGCACTTACATTAGAGTTATGGGAATAT | + |
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Preference number: 6 (lower is better) Translates to: RPTLFYGKIPRL*RSALTLELWEY Trigger: ATATTCCCATAACTCTAATGTAAGTGCGGATCTCCAAAGCCTAGGGATTTTTCCGTAAAAGAGAGTGGGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 72 bp | CATCATGCCCGACGAGCAGCTTATAAGATTGTTGCTTaGTGGACTGAATGTAGGCATTCATCAGATGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: HHARRAAYKIVA*WTECRHSSDAS Trigger: ACTAGCATCTGATGAATGCCTACATTCAGTCCACAAAGCAACAATCTTATAAGCTGCTCGTCGGGCATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608346.1 |
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| CDS CAA 72 bp | CAGAGTACTTTTCATGAGTTCTTCCACAGTGAACCCTaGGATTACCTGGTGGCTTTTTCTAGCCAGATTTGC | + |
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Preference number: 6 (lower is better) Translates to: QSTFHEFFHSEP*DYLVAFSSQIC Trigger: GCAAATCTGGCTAGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTACTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 72 bp | CAAATGTTTTCCATAATACTGTTTGCGCTCATTTGCTaGCCTTGCGCACCTGCTCTCTTACACACATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QMFSIILFALIC*PCAPALLHTSG Trigger: TCCAGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAACATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS GCA 72 bp | TCTCAAATGTTTTCCATAATACTGTTTGCGCTCATTTaGTTGCCTTGCGCACCTGCTCTCTTACACACATCT | + |
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Preference number: 6 (lower is better) Translates to: SQMFSIILFALI*LPCAPALLHTS Trigger: AGATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAACATTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 72 bp | CATGCCCGACGAGCAGCTTATAAGATTGTTGCTTTGTaGACTGAATGTAGGCATTCATCAGATGCTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: HARRAAYKIVAL*TECRHSSDASF Trigger: AAAACTAGCATCTGATGAATGCCTACATTCAGTCCACAAAGCAACAATCTTATAAGCTGCTCGTCGGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608346.1 |
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| CDS CCA 72 bp | AGAGTACTTTTCATGAGTTCTTCCACAGTGAACCCTTaGATTACCTGGTGGCTTTTTCTAGCCAGATTTGCA | + |
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Preference number: 6 (lower is better) Translates to: RVLFMSSSTVNP*ITWWLFLARFA Trigger: TGCAAATCTGGCTAGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 72 bp | TTCTCAAATGTTTTCCATAATACTGTTTGCGCTCATTaGCTTGCCTTGCGCACCTGCTCTCTTACACACATC | + |
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Preference number: 6 (lower is better) Translates to: FSNVFHNTVCAH*LALRTCSLTHI Trigger: GATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAACATTTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS TCA 72 bp | GTGGCTTTTTCTAGCCAGATTTGCATTAATCCTTACTaGGATTGGATGGTTTTCTTTCCTCTATTGGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: VAFSSQICINPY*DWMVFFPLLAP Trigger: TGGCGCCAATAGAGGAAAGAAAACCATCCAATCTCAGTAAGGATTAATGCAAATCTGGCTAGAAAAAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 72 bp | ATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTaGCTTTTTCTAGCCAGATTTGCATTAATCCTTACT | + |
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Preference number: 6 (lower is better) Translates to: MSSSTVNPWITW*LFLARFALILT Trigger: AGTAAGGATTAATGCAAATCTGGCTAGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 72 bp | TTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTaGTGGCTTTTTCTAGCCAGATTTGCATTAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: FMSSSTVNPWIT*WLFLARFALIL Trigger: AAGGATTAATGCAAATCTGGCTAGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 72 bp | GGTCTCATTAAAGTGGAGGGAAAAATAGGACCATTGTaGCTTTGTGGACTGAATGTAGGCATTCATCAGATG | + |
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Preference number: 6 (lower is better) Translates to: GLIKVEGKIGPL*LCGLNVGIHQM Trigger: CATCTGATGAATGCCTACATTCAGTCCACAAAGCAACAATGGTCCTATTTTTCCCTCCACTTTAATGAGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CAA 90 bp | AGAGTGATCGGTCTCATTAAAGTGGAGGGAAAAATAGGACCATTGTaGCTTTGTGGACTGAATGTAGGCATTCATCAGATGCTAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: RVIGLIKVEGKIGPL*LCGLNVGIHQMLVL Trigger: CAAAACTAGCATCTGATGAATGCCTACATTCAGTCCACAAAGCAACAATGGTCCTATTTTTCCCTCCACTTTAATGAGACCGATCACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CAA 90 bp | AGAAGAGTGATCGGTCTCATTAAAGTGGAGGGAAAAATAGGACCATaGTTGCTTTGTGGACTGAATGTAGGCATTCATCAGATGCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: RRVIGLIKVEGKIGP*LLCGLNVGIHQMLV Trigger: AACTAGCATCTGATGAATGCCTACATTCAGTCCACAAAGCAACAATGGTCCTATTTTTCCCTCCACTTTAATGAGACCGATCACTCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609469.5 |
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| CDS CAA 90 bp | TGTATACTTCAGAGTACTTTTCATGAGTTCTTCCACAGTGAACCCTaGGATTACCTGGTGGCTTTTTCTAGCCAGATTTGCATTAATCCT | + |
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Preference number: 6 (lower is better) Translates to: CILQSTFHEFFHSEP*DYLVAFSSQICINP Trigger: AGGATTAATGCAAATCTGGCTAGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTACTCTGAAGTATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CAA 72 bp | CACAACTACTTACGACAAGGGAGATGTTTAGACCTGTaGTGTATACTTCAGAGTACTTTTCATGAGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HNYLRQGRCLDL*CILQSTFHEFF Trigger: GAAGAACTCATGAAAAGTACTCTGAAGTATACACAACAGGTCTAAACATCTCCCTTGTCGTAAGTAGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS CCA 72 bp | ATCCTTACTGAGATTGGATGGTTTTCTTTCCTCTATTaGCGCCATTCTTCAGATATTAAAGTTAAACCATCC | + |
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Preference number: 6 (lower is better) Translates to: ILTEIGWFSFLY*RHSSDIKVKPS Trigger: GGATGGTTTAACTTTAATATCTGAAGAATGGCGCCAATAGAGGAAAGAAAACCATCCAATCTCAGTAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608756.5 |
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| CDS TCA 72 bp | TTTCTTCACTCCATGACTGCTTCTCTTCTATTTTGTTaGAGAGATTCCACTGACCAAGTATTTTATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FLHSMTASLLFC*RDSTDQVFYSE Trigger: TTCAGAATAAAATACTTGGTCAGTGGAATCTCTTCAACAAAATAGAAGAGAAGCAGTCATGGAGTGAAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000608465.5 ENST00000667395.1 |
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