Pregenerated sensors for WDR53 (Homo sapiens)
Ensembl gene IDs: ENSG00000185798Ensembl transcript IDs: ENST00000332629.7, ENST00000425888.1, ENST00000429115.1, ENST00000433160.1, ENST00000456677.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCTGGATAGCAACCAAAATGATTGAAGGGCTGTGGCGCTGGCACTaGGCTTCCCGCTCCCCTCCTCGGCGCCTAGTGATAACCTCACCC | + |
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Preference number: 5 (lower is better) Translates to: SWIATKMIEGLWRWH*ASRSPPRRLVITSP Trigger: GGGTGAGGTTATCACTAGGCGCCGAGGAGGGGAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433160.1 |
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| CDS CCA 90 bp | TTGATGTGGAGAAGCTGGATAGCAACCAAAATGATTGAAGGGCTGTaGCGCTGGCACTGCGCTTCCCGCTCCCCTCCTCGGCGCCTAGTG | + |
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Preference number: 5 (lower is better) Translates to: LMWRSWIATKMIEGL*RWHCASRSPPRRLV Trigger: CACTAGGCGCCGAGGAGGGGAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCAGCTTCTCCACATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000433160.1 |
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| CDS CCA 90 bp | TGGAGAAGCTGGATAGCAACCAAAATGATTGAAGGGCTGTGGCGCTaGCACTGCGCTTCCCGCTCCCCTCCTCGGCGCCTAGTGATAACC | + |
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Preference number: 5 (lower is better) Translates to: WRSWIATKMIEGLWR*HCASRSPPRRLVIT Trigger: GGTTATCACTAGGCGCCGAGGAGGGGAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCAGCTTCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433160.1 |
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| CDS TCA 90 bp | GAAGTTGGACTTGATGTGGAGAAGCTGGATAGCAACCAAAATGATTaGAGGGCTGTGGCGCTGGCACTGCGCTTCCCGCTCCCCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: EVGLDVEKLDSNQND*RAVALALRFPLPSS Trigger: CGAGGAGGGGAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCAGCTTCTCCACATCAAGTCCAACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000433160.1 |
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| CDS GCA 90 bp | AGCAGCCCTTCTTTACTTGCATTCAGGCAGAGGACAGGAGAAGAATaGCCACCCGTCCACTTGACTGCCATAATGGTCCCGGAGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: SSPSLLAFRQRTGEE*PPVHLTAIMVPETL Trigger: CAGAGTCTCCGGGACCATTATGGCAGTCAAGTGGACGGGTGGGCATTCTTCTCCTGTCCTCTGCCTGAATGCAAGTAAAGAAGGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425888.1 |
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| CDS GCA 90 bp | AGCAGCCCTTCTTTACTTGCATTCAGGCAGAGGACAGGAGAAGAATaGCCACCCGTCCACTTGACTGCCATAATGGTCCCGGAGACTCAT | + |
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Preference number: 5 (lower is better) Translates to: SSPSLLAFRQRTGEE*PPVHLTAIMVPETH Trigger: ATGAGTCTCCGGGACCATTATGGCAGTCAAGTGGACGGGTGGGCATTCTTCTCCTGTCCTCTGCCTGAATGCAAGTAAAGAAGGGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456677.1 |
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| CDS CCA 90 bp | GGGGCGCTCAGGAGACGGTCTGCCGTTGAAAGTCACCTCAGCGGCTaGACTAGATTAGTAAGAATGACAACATCGCATCCTTCAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: GALRRRSAVESHLSG*TRLVRMTTSHPSKA Trigger: AGCCTTTGAAGGATGCGATGTTGTCATTCTTACTAATCTAGTCCAGCCGCTGAGGTGACTTTCAACGGCAGACCGTCTCCTGAGCGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000425888.1 |
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| CDS GCA 90 bp | AGCAGCCCTTCTTTACTTGCATTCAGGCAGAGGACAGGAGAAGAATaGCCACCCGTCCACTTGACTGCCATAATGGTCCCGGAGACTTTT | + |
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Preference number: 5 (lower is better) Translates to: SSPSLLAFRQRTGEE*PPVHLTAIMVPETF Trigger: AAAAGTCTCCGGGACCATTATGGCAGTCAAGTGGACGGGTGGGCATTCTTCTCCTGTCCTCTGCCTGAATGCAAGTAAAGAAGGGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332629.7 |
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| CDS CCA 90 bp | TCTACAGGCTTGGGGTTTCTGAAGTTGGACTTGATGTGGAGAAGCTaGATAGCAACCAAAATGATTGAAGGGCTGTGGCGCTGGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: STGLGFLKLDLMWRS*IATKMIEGLWRWHC Trigger: GCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCAGCTTCTCCACATCAAGTCCAACTTCAGAAACCCCAAGCCTGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000433160.1 |
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| CDS GCA 90 bp | CCATGTTCTTCCTCATCTGTTACTGAAGCGTTAGTATTTCCACCCTaGTTGGTGCAAGTTCCTCTTTTAGGTTTCTTCCTGTGGGTACGT | + |
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Preference number: 5 (lower is better) Translates to: PCSSSSVTEALVFPP*LVQVPLLGFFLWVR Trigger: ACGTACCCACAGGAAGAAACCTAAAAGAGGAACTTGCACCAAGCAGGGTGGAAATACTAACGCTTCAGTAACAGATGAGGAAGAACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000332629.7 ENST00000429115.1 ENST00000433160.1 |
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| CDS TCA 90 bp | GTTCAAGAGTCTGTGCCTCTAAGGCTGTTCATTCTGTCTAGTTCATaGTCCCTTTCTCAGATGGATCAACTCTGCTTATCCTTGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: VQESVPLRLFILSSS*SLSQMDQLCLSLKT Trigger: AGTCTTCAAGGATAAGCAGAGTTGATCCATCTGAGAAAGGGATCATGAACTAGACAGAATGAACAGCCTTAGAGGCACAGACTCTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000425888.1 |
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| CDS GCA 90 bp | ACACTTAACTCCCATCACCCGAAAGATTCGAACCTTACCATCTTCTaGACCACAACTAAAAATATTACCACACGAAGCCACAGAGATAGA | + |
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Preference number: 5 (lower is better) Translates to: TLNSHHPKDSNLTIF*TTTKNITTRSHRDR Trigger: TCTATCTCTGTGGCTTCGTGTGGTAATATTTTTAGTTGTGGTGCAGAAGATGGTAAGGTTCGAATCTTTCGGGTGATGGGAGTTAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000332629.7 ENST00000429115.1 ENST00000433160.1 |
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| CDS TCA 72 bp | CACCCGCCGGCGCCCAATCCCGTCGAGCGTCAGGCGTaGGGCGGCGCAGCCAAACAGTCACATCCGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: HPPAPNPVERQA*GGAAKQSHPGP Trigger: CGGCCCCGGATGTGACTGTTTGGCTGCGCCGCCTCACGCCTGACGCTCGACGGGATTGGGCGCCGGCGGGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433160.1 |
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| CDS GCA 72 bp | GCAACCAAAATGATTGAAGGGCTGTGGCGCTGGCACTaGGCTTCCCGCTCCCCTCCTCGGCGCCTAGTGATA | + |
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Preference number: 6 (lower is better) Translates to: ATKMIEGLWRWH*ASRSPPRRLVI Trigger: TATCACTAGGCGCCGAGGAGGGGAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433160.1 |
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| CDS CCA 72 bp | TGGATAGCAACCAAAATGATTGAAGGGCTGTGGCGCTaGCACTGCGCTTCCCGCTCCCCTCCTCGGCGCCTA | + |
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Preference number: 6 (lower is better) Translates to: WIATKMIEGLWR*HCASRSPPRRL Trigger: TAGGCGCCGAGGAGGGGAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000433160.1 |
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| CDS CCA 72 bp | AGAAGCTGGATAGCAACCAAAATGATTGAAGGGCTGTaGCGCTGGCACTGCGCTTCCCGCTCCCCTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSWIATKMIEGL*RWHCASRSPPR Trigger: CCGAGGAGGGGAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCAGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000433160.1 |
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| CDS TCA 72 bp | CTTGATGTGGAGAAGCTGGATAGCAACCAAAATGATTaGAGGGCTGTGGCGCTGGCACTGCGCTTCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LDVEKLDSNQND*RAVALALRFPL Trigger: GAGCGGGAAGCGCAGTGCCAGCGCCACAGCCCTTCAATCATTTTGGTTGCTATCCAGCTTCTCCACATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000433160.1 |
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| CDS TCA 72 bp | TCCTGTAAATTTGTAATCCAGAGTGGTCGGGCTTTTTaGAGACTCCACAGCATCACCTGCGCTTCCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SCKFVIQSGRAF*RLHSITCASRS Trigger: GGAGCGGGAAGCGCAGGTGATGCTGTGGAGTCTTCAAAAAGCCCGACCACTCTGGATTACAAATTTACAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429115.1 |
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| CDS TCA 72 bp | GGACCTGACATCCAGTACACTAATGGTTTCTCCATGTaGGGCATAGAGCTTGGTGGGACAGGAGGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: GPDIQYTNGFSM*GIELGGTGGRK Trigger: TTTTCTCCCTCCTGTCCCACCAAGCTCTATGCCTCACATGGAGAAACCATTAGTGTACTGGATGTCAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000332629.7 ENST00000425888.1 ENST00000456677.1 |
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| CDS CCA 72 bp | AGGAGACGGTCTGCCGTTGAAAGTCACCTCAGCGGCTaGACTAGATTAGTAAGAATGACAACATCGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: RRRSAVESHLSG*TRLVRMTTSHP Trigger: AGGATGCGATGTTGTCATTCTTACTAATCTAGTCCAGCCGCTGAGGTGACTTTCAACGGCAGACCGTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000425888.1 |
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| CDS CCA 72 bp | GGAGAAAATAAGACACTGGTAACATCATCAGCCCCTTaGAACCGCGTGTGTCCTAATGGAGTTCCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GENKTLVTSSAP*NRVCPNGVPSS Trigger: TGAAGATGGAACTCCATTAGGACACACGCGGTTCCAAGGGGCTGATGATGTTACCAGTGTCTTATTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000332629.7 ENST00000425888.1 ENST00000456677.1 |
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| CDS TCA 72 bp | TCCTGTAAATTTGTAATCCAGAGTGGTCGGGCTTTTTaGAGACTCCACAGCATCACCTGCATATCCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SCKFVIQSGRAF*RLHSITCISSP Trigger: TGGACTGGATATGCAGGTGATGCTGTGGAGTCTTCAAAAAGCCCGACCACTCTGGATTACAAATTTACAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332629.7 |
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| CDS CCA 72 bp | TCTACAGGCTTGGGGTTTCTGAAGTTGGACTTGATGTaGAGAAGCTGGATAGCAACCAAAATGATTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: STGLGFLKLDLM*RSWIATKMIEG Trigger: CCCTTCAATCATTTTGGTTGCTATCCAGCTTCTCCACATCAAGTCCAACTTCAGAAACCCCAAGCCTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000332629.7 ENST00000425888.1 ENST00000433160.1 ENST00000456677.1 |
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| CDS CAA 72 bp | GGTCAACTTTTCTCTACAGGCTTGGGGTTTCTGAAGTaGGACTTGATGTGGAGAAGCTGGATAGCAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: GQLFSTGLGFLK*DLMWRSWIATK Trigger: TTTGGTTGCTATCCAGCTTCTCCACATCAAGTCCAACTTCAGAAACCCCAAGCCTGTAGAGAAAAGTTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000332629.7 ENST00000425888.1 ENST00000433160.1 ENST00000456677.1 |
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| CDS TCA 72 bp | TCTGTGCCTCTAAGGCTGTTCATTCTGTCTAGTTCATaGTCCCTTTCTCAGATGGATCAACTCTGCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SVPLRLFILSSS*SLSQMDQLCLS Trigger: GGATAAGCAGAGTTGATCCATCTGAGAAAGGGATCATGAACTAGACAGAATGAACAGCCTTAGAGGCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332629.7 ENST00000425888.1 |
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| CDS GCA 72 bp | TCCTCATCTGTTACTGAAGCGTTAGTATTTCCACCCTaGTTGGTGCAAGTTCCTCTTTTAGGTTTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSVTEALVFPP*LVQVPLLGFFL Trigger: CAGGAAGAAACCTAAAAGAGGAACTTGCACCAAGCAGGGTGGAAATACTAACGCTTCAGTAACAGATGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000332629.7 ENST00000429115.1 ENST00000433160.1 |
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