RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR5 (Homo sapiens)

Ensembl gene IDs: ENSG00000196363

Ensembl transcript IDs: ENST00000358625.4, ENST00000608739.5, ENST00000608937.5

Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCGCGCTTAGCACCCAACCCCTCGAGGAGTCCGAGGGGCAGCACTaGCCCTGCAGCCCTCATAGGGCGCATGAGTCCCACTGGCATCTG +
Preference number: 1 (lower is better)
Translates to: LALSTQPLEESEGQH*PCSPHRAHESHWHL
Trigger: CAGATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTGGGTGCTAAGCGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR GCA 90 bp CTTAGCACCCAACCCCTCGAGGAGTCCGAGGGGCAGCACTGGCCCTaGAGCCCTCATAGGGCGCATGAGTCCCACTGGCATCTGACCTGG +
Preference number: 1 (lower is better)
Translates to: LSTQPLEESEGQHWP*SPHRAHESHWHLTW
Trigger: CCAGGTCAGATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTGGGTGCTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR GCA 90 bp TCAGCCTCGCTCCCCAGAGGCTCCCGCTCGGCCTCTGCTGTTAACTaGTGTGCAGGTGAGCACCGGGAAGCCACACTGCCAGGAGCACAG +
Preference number: 1 (lower is better)
Translates to: SASLPRGSRSASAVN*CAGEHREATLPGAQ
Trigger: CTGTGCTCCTGGCAGTGTGGCTTCCCGGTGCTCACCTGCACAGCAGTTAACAGCAGAGGCCGAGCGGGAGCCTCTGGGGAGCGAGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 90 bp GGGCAGCACTGGCCCTGCAGCCCTCATAGGGCGCATGAGTCCCACTaGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCTTACCATGCC +
Preference number: 1 (lower is better)
Translates to: GQHWPCSPHRAHESH*HLTWSKGLREPYHA
Trigger: GGCATGGTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGCAGGGCCAGTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATaGGCAGGTTCAGGTTTCAGCCTCGCTCCCCAGAGGCTCCCGCTC +
Preference number: 1 (lower is better)
Translates to: LRPHCVWQPSPQLSP*AGSGFSLAPQRLPL
Trigger: GAGCGGGAGCCTCTGGGGAGCGAGGCTGAAACCTGAACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 90 bp CCCTGCAGCCCTCATAGGGCGCATGAGTCCCACTGGCATCTGACCTaGAGTAAGGGACTCAGGGAGCCTTACCATGCCACAGGTGTCCCC +
Preference number: 1 (lower is better)
Translates to: PCSPHRAHESHWHLT*SKGLREPYHATGVP
Trigger: GGGGACACCTGTGGCATGGTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 90 bp CAGGCACCTGTGCCCTCAGCCACCCTGCTCCGCCCTCACTGTGTGTaGCAACCCTCACCACAACTGTCTCCATGGGCAGGTTCAGGTTTC +
Preference number: 1 (lower is better)
Translates to: QAPVPSATLLRPHCV*QPSPQLSPWAGSGF
Trigger: GAAACCTGAACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAGCAGGGTGGCTGAGGGCACAGGTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR TCA 90 bp ACTGGCCCTGCAGCCCTCATAGGGCGCATGAGTCCCACTGGCATCTaGCCTGGAGTAAGGGACTCAGGGAGCCTTACCATGCCACAGGTG +
Preference number: 1 (lower is better)
Translates to: TGPAALIGRMSPTGI*PGVRDSGSLTMPQV
Trigger: CACCTGTGGCATGGTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGCAGGGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR GCA 90 bp GGTGCTGCTTGTTGCAGGGACACTGAGACAAACGGGAGAGTCATGTaGGATGACCGTGCTATCGGCATGTGGGCCACAAACTCCCAAGAC +
Preference number: 1 (lower is better)
Translates to: GAACCRDTETNGRVM*DDRAIGMWATNSQD
Trigger: GTCTTGGGAGTTTGTGGCCCACATGCCGATAGCACGGTCATCGCACATGACTCTCCCGTTTGTCTCAGTGTCCCTGCAACAAGCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 90 bp TTCCACCCTCTTGCCCCAGGGGAGCCTTTCTCCAAGAAAGCCACATaGAGACGAGCTTCACAAGGACGCACTTGCCACAACCATTCACAA +
Preference number: 1 (lower is better)
Translates to: FHPLAPGEPFSKKAT*RRASQGRTCHNHSQ
Trigger: TTGTGAATGGTTGTGGCAAGTGCGTCCTTGTGAAGCTCGTCTCCATGTGGCTTTCTTGGAGAAAGGCTCCCCTGGGGCAAGAGGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR CCA 90 bp CTCGCGCTTAGCACCCAACCCCTCGAGGAGTCCGAGGGGCAGCACTGGCCCTGCAAAGGGGAGGCCAGCTaGCGGGGCCACGGTGGCGGT +
Preference number: 2 (lower is better)
Translates to: LALSTQPLEESEGQHWPCKGEAS*RGHGGG
Trigger: ACCGCCACCGTGGCCCCGCCAGCTGGCCTCCCCTTT...GCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTGGGTGCTAAGCGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR GCA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTGGGCAGCACTGGCCCTaGAGCCCTCATAGGGCGCAT +
Preference number: 2 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGGQHWP*SPHRAH
Trigger: ATGCGCCCTATGAGGGCTGCAGGGCCAGTGCTGCCC...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR TCA 90 bp CTCAGCACCTCCTGTCCAAAGAAACCTTCCACCCTCTTGCCCCAGGGGAGCCTTAATCAGGCCCTGTCCTaGCCCCCAGGCGCAGATCTG +
Preference number: 2 (lower is better)
Translates to: LSTSCPKKPSTLLPQGSLNQALS*PPGADL
Trigger: CAGATCTGCGCCTGGGGGTCAGGACAGGGCCTGATT...AAGGCTCCCCTGGGGCAAGAGGGTGGAAGGTTTCTTTGGACAGGAGGTGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR CCA 90 bp GGGCTCCAGCAGGGACGGCGAGGCTCGCGCTTAGCACCCAACCCCTCGAGGAGTGGCCACAGCGTGCACTaGGTCATGGAATATCAAAAA +
Preference number: 2 (lower is better)
Translates to: GLQQGRRGSRLAPNPSRSGHSVH*VMEYQK
Trigger: TTTTTGATATTCCATGACCCAGTGCACGCTGTGGCC...ACTCCTCGAGGGGTTGGGTGCTAAGCGCGAGCCTCGCCGTCCCTGCTGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR CCA 90 bp ATGTGCGATGACCGTGCTATCGGCATGTGGGCCACAAACTCCCAAGACACAAACCTACGCAGCAGAGAATaGGGGCGGCCGGCGTGGGCC +
Preference number: 2 (lower is better)
Translates to: MCDDRAIGMWATNSQDTNLRSRE*GRPAWA
Trigger: GGCCCACGCCGGCCGCCCCCATTCTCTGCTGCGTAG...GTTTGTGTCTTGGGAGTTTGTGGCCCACATGCCGATAGCACGGTCATCGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR GCA 90 bp CACAACTGTCTCCATGGGCAGGTTCAGGTTTCAGCCTCGCTCCCCAGAGGCTCCGCCTCTGCTGTTAACTaGTGTGCAGGTGAGCACCGG +
Preference number: 2 (lower is better)
Translates to: HNCLHGQVQVSASLPRGSASAVN*CAGEHR
Trigger: CCGGTGCTCACCTGCACAGCAGTTAACAGCAGAGGC...GGAGCCTCTGGGGAGCGAGGCTGAAACCTGAACCTGCCCATGGAGACAGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CAA 90 bp GCAGCCAGCCTCAGCACCTCCTGTCCAAAGAAACCTTCCACCCTCTaGCCCCAGGGGAGCCTTTCTCCAAGAAAGCCACATGGAGACGAG +
Preference number: 2 (lower is better)
Translates to: AASLSTSCPKKPSTL*PQGSLSPRKPHGDE
Trigger: CTCGTCTCCATGTGGCTTTCTTGGAGAAAGGCTCCCCTGGGGCAAGAGGGTGGAAGGTTTCTTTGGACAGGAGGTGCTGAGGCTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR CCA 90 bp GGGCTCCAGCAGGGACGGCGAGGCTCGCGCTTAGCACCCAACCCCTCGAGGAGTGCGTGCACTGGGTCATaGAATATCAAAAAGATACAG +
Preference number: 2 (lower is better)
Translates to: GLQQGRRGSRLAPNPSRSACTGS*NIKKIQ
Trigger: CTGTATCTTTTTGATATTCCATGACCCAGTGCACGC...ACTCCTCGAGGGGTTGGGTGCTAAGCGCGAGCCTCGCCGTCCCTGCTGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR GCA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTTGCGGTGCTGCTTGTTaGAGGGACACTGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGCGAAC*RDTETN
Trigger: GTTTGTCTCAGTGTCCCTGCAACAAGCAGCACCGCA...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR CCA 90 bp AGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCAGGGCCCTCCCCAGGCGCAGATCTaGGGGACCACCTCCAAGACA +
Preference number: 2 (lower is better)
Translates to: RRKYTRNSYWREWRSQGPPQAQI*GTTSKT
Trigger: TGTCTTGGAGGTGGTCCCCCAGATCTGCGCCTGGGG...AGGGCCCTGACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR TCA 90 bp TCTACGCAGCAGAGAATGGGGGCGGCCGGCGTGGGCCAAAGGGGAGGCCAGCTGCAACGCATGTTAAATTaGACTTCACCCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: STQQRMGAAGVGQRGGQLQRMLN*TSPFCN
Trigger: ATTACAGAAGGGTGAAGTTCAATTTAACATGCGTTG...CAGCTGGCCTCCCCTTTGGCCCACGCCGGCCGCCCCCATTCTCTGCTGCGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR CCA 90 bp GCGCATGAGTCCCACTGGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCTTACTTAAGAACTTTCCGGTaGTCCACACCTTCCGCTCGG +
Preference number: 2 (lower is better)
Translates to: AHESHWHLTWSKGLREPYLRTFR*STPSAR
Trigger: CCGAGCGGAAGGTGTGGACCACCGGAAAGTTCTTAA...GTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR GCA 90 bp CCACAGGTGTCCCCCACATCCCAACGCAAGTCCATCAGGAGCTTGGCTCCTTCGCCTTTTATTACAGTCTaGGGTGCTGCTTGTTGCAGG +
Preference number: 2 (lower is better)
Translates to: PQVSPTSQRKSIRSLAPSPFITV*GAACCR
Trigger: CCTGCAACAAGCAGCACCGCAGACTGTAATAAAAGG...CGAAGGAGCCAAGCTCCTGATGGACTTGCGTTGGGATGTGGGGGACACCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR GCA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTAAAACAACCACTCAATaGTGTTTTCCAGAAAGACGA +
Preference number: 2 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGKTTTQ*CFPERR
Trigger: TCGTCTTTCTGGAAAACAGCATTGAGTGGTTGTTTT...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 72 bp AGCACCCAACCCCTCGAGGAGTCCGAGGGGCAGCACTaGCCCTGCAGCCCTCATAGGGCGCATGAGTCCCAC +
Preference number: 3 (lower is better)
Translates to: STQPLEESEGQH*PCSPHRAHESH
Trigger: GTGGGACTCATGCGCCCTATGAGGGCTGCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTGGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 72 bp CTTCCCAGAGCATCACAGCCCCAAAGCCCTGCCCCGTaGGACAGACCCAGGCACCTGTGCCCTCAGCCACCC +
Preference number: 3 (lower is better)
Translates to: LPRASQPQSPAP*DRPRHLCPQPP
Trigger: GGGTGGCTGAGGGCACAGGTGCCTGGGTCTGTCCCACGGGGCAGGGCTTTGGGGCTGTGATGCTCTGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR GCA 72 bp CAACCCCTCGAGGAGTCCGAGGGGCAGCACTGGCCCTaGAGCCCTCATAGGGCGCATGAGTCCCACTGGCAT +
Preference number: 3 (lower is better)
Translates to: QPLEESEGQHWP*SPHRAHESHWH
Trigger: ATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR GCA 72 bp AAGCTGGCTTCCCAGAGCATCACAGCCCCAAAGCCCTaGCCCGTGGGACAGACCCAGGCACCTGTGCCCTCA +
Preference number: 3 (lower is better)
Translates to: KLASQSITAPKP*PVGQTQAPVPS
Trigger: TGAGGGCACAGGTGCCTGGGTCTGTCCCACGGGGCAGGGCTTTGGGGCTGTGATGCTCTGGGAAGCCAGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 72 bp GTGCCCTCAGCCACCCTGCTCCGCCCTCACTGTGTGTaGCAACCCTCACCACAACTGTCTCCATGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: VPSATLLRPHCV*QPSPQLSPWAG
Trigger: ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAGCAGGGTGGCTGAGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 72 bp TGGCCCTGCAGCCCTCATAGGGCGCATGAGTCCCACTaGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: WPCSPHRAHESH*HLTWSKGLREP
Trigger: AGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGCAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR TCA 72 bp GCAGCCCTCATAGGGCGCATGAGTCCCACTGGCATCTaGCCTGGAGTAAGGGACTCAGGGAGCCTTACCATG +
Preference number: 3 (lower is better)
Translates to: AALIGRMSPTGI*PGVRDSGSLTM
Trigger: CATGGTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGCCCTATGAGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 72 bp CACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATaGGCAGGTTCAGGTTTCAGCCTCGCTCCCCAGAGG +
Preference number: 3 (lower is better)
Translates to: HCVWQPSPQLSP*AGSGFSLAPQR
Trigger: CCTCTGGGGAGCGAGGCTGAAACCTGAACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 72 bp CTTGCCCCAGGGGAGCCTTTCTCCAAGAAAGCCACATaGAGACGAGCTTCACAAGGACGCACTTGCCACAAC +
Preference number: 3 (lower is better)
Translates to: LAPGEPFSKKAT*RRASQGRTCHN
Trigger: GTTGTGGCAAGTGCGTCCTTGTGAAGCTCGTCTCCATGTGGCTTTCTTGGAGAAAGGCTCCCCTGGGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR GCA 72 bp TGTTGCAGGGACACTGAGACAAACGGGAGAGTCATGTaGGATGACCGTGCTATCGGCATGTGGGCCACAAAC +
Preference number: 3 (lower is better)
Translates to: CCRDTETNGRVM*DDRAIGMWATN
Trigger: GTTTGTGGCCCACATGCCGATAGCACGGTCATCGCACATGACTCTCCCGTTTGTCTCAGTGTCCCTGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR-3UTR CAA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTTTCACAAGGACGCACTaGCCACAACCATTCACAAAA +
Preference number: 3 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGFTRTH*PQPFTK
Trigger: TTTTGTGAATGGTTGTGGCAAGTGCGTCCTTGTGAA...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
3UTR CCA 72 bp GGGGCCACGGTGGCGGTGACAGGCCACAGCGTGCACTaGGTCATGGAATATCAAAAAGATACAGAACGTTTA +
Preference number: 3 (lower is better)
Translates to: GATVAVTGHSVH*VMEYQKDTERL
Trigger: TAAACGTTCTGTATCTTTTTGATATTCCATGACCCAGTGCACGCTGTGGCCTGTCACCGCCACCGTGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GCTCCGGGGCCAGGGCCCTCTGTAGACCCAGGACCCAAGCTGGCTTCCCAGAGCGGGCAGCACTGGCCCTaGAGCCCTCATAGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: APGPGPSVDPGPKLASQSGQHWP*SPHRAH
Trigger: ATGCGCCCTATGAGGGCTGCAGGGCCAGTGCTGCCC...GCTCTGGGAAGCCAGCTTGGGTCCTGGGTCTACAGAGGGCCCTGGCCCCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp CTCGCGCTTAGCACCCAACCCCTCGAGGAGTCCGAGGGGCAGCACTGGCCCTGCGAGGAGTCAGGGCCCTaGGCCAGGGCATCTACGCAG +
Preference number: 4 (lower is better)
Translates to: LALSTQPLEESEGQHWPCEESGP*ARASTQ
Trigger: CTGCGTAGATGCCCTGGCCCAGGGCCCTGACTCCTC...GCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTGGGTGCTAAGCGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp CACAACTGTCTCCATGGGCAGGTTCAGGTTTCAGCCTCGCTCCCCAGAGGCTCCAAAGGGGAGGCCAGCTaGCGGGGCCACGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: HNCLHGQVQVSASLPRGSKGEAS*RGHGGG
Trigger: ACCGCCACCGTGGCCCCGCCAGCTGGCCTCCCCTTT...GGAGCCTCTGGGGAGCGAGGCTGAAACCTGAACCTGCCCATGGAGACAGTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp GCTCCGGGGCCAGGGCCCTCTGTAGACCCAGGACCCAAGCTGGCTTCCCAGAGCCGCCCCCAGCAACACTaGACAATGAACCTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: APGPGPSVDPGPKLASQSRPQQH*TMNLER
Trigger: CCTCTCTAGGTTCATTGTTCAGTGTTGCTGGGGGCG...GCTCTGGGAAGCCAGCTTGGGTCCTGGGTCTACAGAGGGCCCTGGCCCCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp GCGCATGAGTCCCACTGGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCTTACCCCCCAGAACAAGACTaGAGGGGCCTCGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: AHESHWHLTWSKGLREPYPPEQD*RGLAGP
Trigger: GGGGCCGGCGAGGCCCCTTCAGTCTTGTTCTGGGGG...GTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp CTCAGCACCTCCTGTCCAAAGAAACCTTCCACCCTCTTGCCCCAGGGGAGCCTTCTACGCAGCAGAGAATaGGGGCGGCCGGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSTSCPKKPSTLLPQGSLLRSRE*GRPAWA
Trigger: GGCCCACGCCGGCCGCCCCCATTCTCTGCTGCGTAG...AAGGCTCCCCTGGGGCAAGAGGGTGGAAGGTTTCTTTGGACAGGAGGTGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GCTCCGGGGCCAGGGCCCTCTGTAGACCCAGGACCCAAGCTGGCTTCCCAGAGCCGGCCAGGATGTATTTaGCGTTCGGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: APGPGPSVDPGPKLASQSRPGCI*RSGRTS
Trigger: TGAAGTTCTCCCCGAACGGCAAATACATCCTGGCCG...GCTCTGGGAAGCCAGCTTGGGTCCTGGGTCTACAGAGGGCCCTGGCCCCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp GCTCCGGGGCCAGGGCCCTCTGTAGACCCAGGACCCAAGCTGGCTTCCCAGAGCTTAAGAACTTTCCGGTaGTCCACACCTTCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: APGPGPSVDPGPKLASQSLRTFR*STPSAR
Trigger: CCGAGCGGAAGGTGTGGACCACCGGAAAGTTCTTAA...GCTCTGGGAAGCCAGCTTGGGTCCTGGGTCTACAGAGGGCCCTGGCCCCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp GGGCTCCAGCAGGGACGGCGAGGCTCGCGCTTAGCACCCAACCCCTCGAGGAGTCCATCACGATTAAAATaGACGGCCGAGACTGGATCC +
Preference number: 4 (lower is better)
Translates to: GLQQGRRGSRLAPNPSRSPSRLK*TAETGS
Trigger: GGATCCAGTCTCGGCCGTTCATTTTAATCGTGATGG...ACTCCTCGAGGGGTTGGGTGCTAAGCGCGAGCCTCGCCGTCCCTGCTGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp CACAACTGTCTCCATGGGCAGGTTCAGGTTTCAGCCTCGCTCCCCAGAGGCTCCAATCAGGCCCTGTCCTaGCCCCCAGGCGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: HNCLHGQVQVSASLPRGSNQALS*PPGADL
Trigger: CAGATCTGCGCCTGGGGGTCAGGACAGGGCCTGATT...GGAGCCTCTGGGGAGCGAGGCTGAAACCTGAACCTGCCCATGGAGACAGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp CTCGCGCTTAGCACCCAACCCCTCGAGGAGTCCGAGGGGCAGCACTGGCCCTGCTTGTTGCAGGGACACTaGGACAAACGGGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LALSTQPLEESEGQHWPCLLQGH*DKRESH
Trigger: ATGACTCTCCCGTTTGTCTCAGTGTCCCTGCAACAA...GCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTGGGTGCTAAGCGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GCTCCGGGGCCAGGGCCCTCTGTAGACCCAGGACCCAAGCTGGCTTCCCAGAGCTATTACAGTCTGCGGTaGTGCTTGTTGCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: APGPGPSVDPGPKLASQSYYSLR*CLLQGH
Trigger: GTGTCCCTGCAACAAGCAGCACCGCAGACTGTAATA...GCTCTGGGAAGCCAGCTTGGGTCCTGGGTCTACAGAGGGCCCTGGCCCCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTACCGGGAAGCCACACTaGCAGGAGCACAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGTGKPH*QEHRQR
Trigger: CCTCTGCCTGTGCTCCTGGCAGTGTGGCTTCCCGGT...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp GCGCATGAGTCCCACTGGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCTTACTCCGAGGGGCAGCACTaGCCCTGCAGCCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: AHESHWHLTWSKGLREPYSEGQH*PCSPHR
Trigger: CCTATGAGGGCTGCAGGGCCAGTGCTGCCCCTCGGA...GTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp CTCAGCACCTCCTGTCCAAAGAAACCTTCCACCCTCTTGCCCCAGGGGAGCCTTCAAAGCCCTGCCCCGTaGGACAGACCCAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LSTSCPKKPSTLLPQGSLQSPAP*DRPRHL
Trigger: CAGGTGCCTGGGTCTGTCCCACGGGGCAGGGCTTTG...AAGGCTCCCCTGGGGCAAGAGGGTGGAAGGTTTCTTTGGACAGGAGGTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GCGCATGAGTCCCACTGGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCTTACTGCCCTCAGCCACCCTaGTCCGCCCTCACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AHESHWHLTWSKGLREPYCPQPP*SALTVC
Trigger: ACACACAGTGAGGGCGGAGCAGGGTGGCTGAGGGCA...GTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTCAGGGAGCCTTACCATaGCACAGGTGTCCCCCACAT +
Preference number: 4 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGQGALP*HRCPPH
Trigger: ATGTGGGGGACACCTGTGGCATGGTAAGGCTCCCTG...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp CCACAGGTGTCCCCCACATCCCAACGCAAGTCCATCAGGAGCTTGGCTCCTTCGGAGAGTCATGTGCGATaGCCGTGCTATCGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PQVSPTSQRKSIRSLAPSESHVR*PCYRHV
Trigger: CACATGCCGATAGCACGGTCATCGCACATGACTCTC...CGAAGGAGCCAAGCTCCTGATGGACTTGCGTTGGGATGTGGGGGACACCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp AGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCAGGGCCCTACAGCCCCAAAGCCCTaGCCCGTGGGACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: RRKYTRNSYWREWRSQGPTAPKP*PVGQTQ
Trigger: CTGGGTCTGTCCCACGGGGCAGGGCTTTGGGGCTGT...AGGGCCCTGACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp TCTACGCAGCAGAGAATGGGGGCGGCCGGCGTGGGCCAAAGGGGAGGCCAGCTGATCACGACATCTGTGTaGCCTTGTAGTTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: STQQRMGAAGVGQRGGQLITTSV*PCSFCT
Trigger: TGTACAGAAACTACAAGGCCACACAGATGTCGTGAT...CAGCTGGCCTCCCCTTTGGCCCACGCCGGCCGCCCCCATTCTCTGCTGCGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GGCCACGGTGGCGGTGACAGGCCACAGCGTGCACTGGGTCATGGAATATCAAAAAGGCGGTGTCCCAGATaGGACAGAGACCATCATAGC +
Preference number: 4 (lower is better)
Translates to: GHGGGDRPQRALGHGISKRRCPR*DRDHHS
Trigger: GCTATGATGGTCTCTGTCGCATCTGGGACACCGCCT...TTTTGATATTCCATGACCCAGTGCACGCTGTGGCCTGTCACCGCCACCGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp AGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCAGGGCCCTAGCTACTGGCGGGAATaGAGGAGTCAGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRKYTRNSYWREWRSQGPSYWRE*RSQGPG
Trigger: CCCAGGGCCCTGACTCCTCCATTCCCGCCAGTAGCT...AGGGCCCTGACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp GCGCATGAGTCCCACTGGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCTTACCACTGGCATCTGACCTaGAGTAAGGGACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AHESHWHLTWSKGLREPYHWHLT*SKGLRE
Trigger: CTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTG...GTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp CAAGTCCATCAGGAGCTTGGCTCCTTCGCAACTAAGAACCTCCCCACCCCCGTTCGCCCTCACTGTGTGTaGCAACCCTCACCACAACTG +
Preference number: 4 (lower is better)
Translates to: QVHQELGSFATKNLPTPVRPHCV*QPSPQL
Trigger: CAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCG...AACGGGGGTGGGGAGGTTCTTAGTTGCGAAGGAGCCAAGCTCCTGATGGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp CAAGTCCATCAGGAGCTTGGCTCCTTCGCAACTAAGAACCTCCCCACCCCCGTTAGTCCCACTGGCATCTaGCCTGGAGTAAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: QVHQELGSFATKNLPTPVSPTGI*PGVRDS
Trigger: TGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACT...AACGGGGGTGGGGAGGTTCTTAGTTGCGAAGGAGCCAAGCTCCTGATGGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp CAAGTCCATCAGGAGCTTGGCTCCTTCGCAACTAAGAACCTCCCCACCCCCGTTGCGCATGAGTCCCACTaGCATCTGACCTGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: QVHQELGSFATKNLPTPVAHESH*HLTWSK
Trigger: CTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGC...AACGGGGGTGGGGAGGTTCTTAGTTGCGAAGGAGCCAAGCTCCTGATGGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp CCACAGGTGTCCCCCACATCCCAACGCAAGTCCATCAGGAGCTTGGCTCCTTCGAAGTTTATCAGCAGATaGACTTGCCAGCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: PQVSPTSQRKSIRSLAPSKFISR*TCQPLS
Trigger: GGAGAGTGGCTGGCAAGTTCATCTGCTGATAAACTT...CGAAGGAGCCAAGCTCCTGATGGACTTGCGTTGGGATGTGGGGGACACCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GCTTGTTGCAGGGACACTGAGACAAACGGGAGAGTCATGTGCGATGACCGTGCTAACGGGAGAGTCATGTaGGATGACCGTGCTATCGGC +
Preference number: 4 (lower is better)
Translates to: ACCRDTETNGRVMCDDRANGRVM*DDRAIG
Trigger: GCCGATAGCACGGTCATCGCACATGACTCTCCCGTT...AGCACGGTCATCGCACATGACTCTCCCGTTTGTCTCAGTGTCCCTGCAACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp GTGACAGGCCACAGCGTGCACTGGGTCATGGAATATCAAAAAGATACAGAACGTAGCGTCTTCAGGCACTaGCCTGAGGCGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VTGHSVHWVMEYQKDTERSVFRH*PEAVSQ
Trigger: CTGGGACACCGCCTCAGGCCAGTGCCTGAAGACGCT...ACGTTCTGTATCTTTTTGATATTCCATGACCCAGTGCACGCTGTGGCCTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp TTCCAGAAAGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCCCCCAGGCGCAGATCTaGGGGACCACCTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: FQKDENTLGTATGGNGGVPQAQI*GTTSKT
Trigger: TGTCTTGGAGGTGGTCCCCCAGATCTGCGCCTGGGG...GACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCTTTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp AGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCAGGGCCCTCCACAACTGTCTCCATaGGCAGGTTCAGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RRKYTRNSYWREWRSQGPPQLSP*AGSGFS
Trigger: GCTGAAACCTGAACCTGCCCATGGAGACAGTTGTGG...AGGGCCCTGACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GCTTGTTGCAGGGACACTGAGACAAACGGGAGAGTCATGTGCGATGACCGTGCTCCTTTTATTACAGTCTaGGGTGCTGCTTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ACCRDTETNGRVMCDDRAPFITV*GAACCR
Trigger: CCTGCAACAAGCAGCACCGCAGACTGTAATAAAAGG...AGCACGGTCATCGCACATGACTCTCCCGTTTGTCTCAGTGTCCCTGCAACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp TTCCAGAAAGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCGCCTCTGCTGTTAACTaGTGTGCAGGTGAGCACCGG +
Preference number: 4 (lower is better)
Translates to: FQKDENTLGTATGGNGGVASAVN*CAGEHR
Trigger: CCGGTGCTCACCTGCACAGCAGTTAACAGCAGAGGC...GACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCTTTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp TTCCAGAAAGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCGAGACTGGATCCGAGTaGGCTGGCAAAGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FQKDENTLGTATGGNGGVETGSE*AGKVLR
Trigger: CCTCAAGACTTTGCCAGCTCACTCGGATCCAGTCTC...GACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCTTTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp CACAACTGTCTCCATGGGCAGGTTCAGGTTTCAGCCTCGCTCCCCAGAGGCTCCAAAACAACCACTCAATaGTGTTTTCCAGAAAGACGA +
Preference number: 4 (lower is better)
Translates to: HNCLHGQVQVSASLPRGSKTTTQ*CFPERR
Trigger: TCGTCTTTCTGGAAAACAGCATTGAGTGGTTGTTTT...GGAGCCTCTGGGGAGCGAGGCTGAAACCTGAACCTGCCCATGGAGACAGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp TTCCAGAAAGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCATGAACGGCCGAGACTaGATCCGAGTGAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FQKDENTLGTATGGNGGVMNGRD*IRVSWQ
Trigger: TTGCCAGCTCACTCGGATCCAGTCTCGGCCGTTCAT...GACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCTTTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp GTGACAGGCCACAGCGTGCACTGGGTCATGGAATATCAAAAAGATACAGAACGTGAGTGTTGTCCAGCGTaGCGGCCAGGATGTATTTGC +
Preference number: 4 (lower is better)
Translates to: VTGHSVHWVMEYQKDTERECCPA*RPGCIC
Trigger: GCAAATACATCCTGGCCGCCACGCTGGACAACACTC...ACGTTCTGTATCTTTTTGATATTCCATGACCCAGTGCACGCTGTGGCCTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp ATGTGCGATGACCGTGCTATCGGCATGTGGGCCACAAACTCCCAAGACACAAACGGCCACAGCGTGCACTaGGTCATGGAATATCAAAAA +
Preference number: 4 (lower is better)
Translates to: MCDDRAIGMWATNSQDTNGHSVH*VMEYQK
Trigger: TTTTTGATATTCCATGACCCAGTGCACGCTGTGGCC...GTTTGTGTCTTGGGAGTTTGTGGCCCACATGCCGATAGCACGGTCATCGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp GCGCATGAGTCCCACTGGCATCTGACCTGGAGTAAGGGACTCAGGGAGCCTTACCAACGCATGTTAAATTaGACTTCACCCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: AHESHWHLTWSKGLREPYQRMLN*TSPFCN
Trigger: ATTACAGAAGGGTGAAGTTCAATTTAACATGCGTTG...GTAAGGCTCCCTGAGTCCCTTACTCCAGGTCAGATGCCAGTGGGACTCATGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp GTGACAGGCCACAGCGTGCACTGGGTCATGGAATATCAAAAAGATACAGAACGTGGGTTTTCAGACACTTaGCCGAGCTCACGTCCCATA +
Preference number: 4 (lower is better)
Translates to: VTGHSVHWVMEYQKDTERGFSDT*PSSRPI
Trigger: TATGGGACGTGAGCTCGGGCAAGTGTCTGAAAACCC...ACGTTCTGTATCTTTTTGATATTCCATGACCCAGTGCACGCTGTGGCCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR GCA 90 bp TTCCAGAAAGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCTGCGGTGCTGCTTGTTaGAGGGACACTGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: FQKDENTLGTATGGNGGVCGAAC*RDTETN
Trigger: GTTTGTCTCAGTGTCCCTGCAACAAGCAGCACCGCA...GACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCTTTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR TCA 90 bp AGACGAAAATACACTAGGAACAGCTACTGGCGGGAATGGAGGAGTCAGGGCCCTGATATTCCCAGCTTGTaGCCAGATATGGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: RRKYTRNSYWREWRSQGPDIPSL*PDMVFS
Trigger: TGAGAAAACCATATCTGGTCACAAGCTGGGAATATC...AGGGCCCTGACTCCTCCATTCCCGCCAGTAGCTGTTCCTAGTGTATTTTCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CCA 90 bp ATGTGCGATGACCGTGCTATCGGCATGTGGGCCACAAACTCCCAAGACACAAACGCGTGCACTGGGTCATaGAATATCAAAAAGATACAG +
Preference number: 4 (lower is better)
Translates to: MCDDRAIGMWATNSQDTNACTGS*NIKKIQ
Trigger: CTGTATCTTTTTGATATTCCATGACCCAGTGCACGC...GTTTGTGTCTTGGGAGTTTGTGGCCCACATGCCGATAGCACGGTCATCGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS CCA 90 bp CAGAGCCCGCGGTGCACGAACCTGCTCCCCGCCAGCCCCGCGGACTaGCAGGGCCGCTCTGGAGTCACCCGCGCCCGCTCCGCAGTGCGC +
Preference number: 5 (lower is better)
Translates to: QSPRCTNLLPASPAD*QGRSGVTRARSAVR
Trigger: GCGCACTGCGGAGCGGGCGCGGGTGACTCCAGAGCGGCCCTGCCAGTCCGCGGGGCTGGCGGGGAGCAGGTTCGTGCACCGCGGGCTCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS GCA 90 bp GGCTCTTCCCGCCTCTGCATGCACAGAGCCCGCGGTGCACGAACCTaGTCCCCGCCAGCCCCGCGGACTGGCAGGGCCGCTCTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: GSSRLCMHRARGART*SPPAPRTGRAALES
Trigger: TGACTCCAGAGCGGCCCTGCCAGTCCGCGGGGCTGGCGGGGAGCAGGTTCGTGCACCGCGGGCTCTGTGCATGCAGAGGCGGGAAGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS CCA 90 bp ACGCCCTGTACACAGACACCAGCGGCCCTCCGGGACCTGCGCAGGTaGCGTCGCCCGGCGTTGTCTCCGGAGTCGATTCGGGCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: TPCTQTPAALRDLRR*RRPALSPESIRAGA
Trigger: TGCCCCGGCCCGAATCGACTCCGGAGACAACGCCGGGCGACGCCACCTGCGCAGGTCCCGGAGGGCCGCTGGTGTCTGTGTACAGGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608739.5
ENST00000608937.5
CDS GCA 90 bp CAGACAGCACGCCCTGTACACAGACACCAGCGGCCCTCCGGGACCTaGGCAGGTGGCGTCGCCCGGCGTTGTCTCCGGAGTCGATTCGGG +
Preference number: 5 (lower is better)
Translates to: QTARPVHRHQRPSGT*AGGVARRCLRSRFG
Trigger: CCCGAATCGACTCCGGAGACAACGCCGGGCGACGCCACCTGCGCAGGTCCCGGAGGGCCGCTGGTGTCTGTGTACAGGGCGTGCTGTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608739.5
ENST00000608937.5
CDS GCA 90 bp CCGGGCGGGCAGGACGATTCCTGCCCATCTGGAAGACCAGGAACCTaGGCGTTCACAGGGTTCGGAAGCCCGGGCTGCGCCTTCCCGCGG +
Preference number: 5 (lower is better)
Translates to: PGGQDDSCPSGRPGT*AFTGFGSPGCAFPR
Trigger: CCGCGGGAAGGCGCAGCCCGGGCTTCCGAACCCTGTGAACGCGCAGGTTCCTGGTCTTCCAGATGGGCAGGAATCGTCCTGCCCGCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS CCA 90 bp CATGTGGCCTCCCACCCCGGGCGGGCAGGACGATTCCTGCCCATCTaGAAGACCAGGAACCTGCGCGTTCACAGGGTTCGGAAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: HVASHPGRAGRFLPI*KTRNLRVHRVRKPG
Trigger: CCCGGGCTTCCGAACCCTGTGAACGCGCAGGTTCCTGGTCTTCCAGATGGGCAGGAATCGTCCTGCCCGCCCGGGGTGGGAGGCCACATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS GCA 90 bp AGTGCCCCCATGTGGCCTCCCACCCCGGGCGGGCAGGACGATTCCTaGCCATCTGGAAGACCAGGAACCTGCGCGTTCACAGGGTTCGGA +
Preference number: 5 (lower is better)
Translates to: SAPMWPPTPGGQDDS*PSGRPGTCAFTGFG
Trigger: TCCGAACCCTGTGAACGCGCAGGTTCCTGGTCTTCCAGATGGGCAGGAATCGTCCTGCCCGCCCGGGGTGGGAGGCCACATGGGGGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS-3UTR CAA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTCAGAGCTTCAGAGTGTaGTCCAGCGTGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGQSFRV*SSVAAR
Trigger: CCTGGCCGCCACGCTGGACAACACTCTGAAGCTCTG...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CAA 90 bp CTCGCGCTTAGCACCCAACCCCTCGAGGAGTCCGAGGGGCAGCACTGGCCCTGCAAGTCCATCAGGAGCTaGGCTCCTTCGCAACTAAGA +
Preference number: 5 (lower is better)
Translates to: LALSTQPLEESEGQHWPCKSIRS*APSQLR
Trigger: TCTTAGTTGCGAAGGAGCCAAGCTCCTGATGGACTT...GCAGGGCCAGTGCTGCCCCTCGGACTCCTCGAGGGGTTGGGTGCTAAGCGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CAA 90 bp CTCCGCCCTCACTGTGTGTGGCAACCCTCACCACAACTGTCTCCATGGGCAGGTGCGGCCAGGATGTATTaGCCGTTCGGGGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: LRPHCVWQPSPQLSPWAGAARMY*PFGENF
Trigger: GAAGTTCTCCCCGAACGGCAAATACATCCTGGCCGC...ACCTGCCCATGGAGACAGTTGTGGTGAGGGTTGCCACACACAGTGAGGGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CAA 90 bp CCACAGGTGTCCCCCACATCCCAACGCAAGTCCATCAGGAGCTTGGCTCCTTCGAGGGTTTTCAGACACTaGCCCGAGCTCACGTCCCAT +
Preference number: 5 (lower is better)
Translates to: PQVSPTSQRKSIRSLAPSRVFRH*PELTSH
Trigger: ATGGGACGTGAGCTCGGGCAAGTGTCTGAAAACCCT...CGAAGGAGCCAAGCTCCTGATGGACTTGCGTTGGGATGTGGGGGACACCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS-3UTR CAA 90 bp CAAGTCCATCAGGAGCTTGGCTCCTTCGCAACTAAGAACCTCCCCACCCCCGTTTTCACAAGGACGCACTaGCCACAACCATTCACAAAA +
Preference number: 5 (lower is better)
Translates to: QVHQELGSFATKNLPTPVFTRTH*PQPFTK
Trigger: TTTTGTGAATGGTTGTGGCAAGTGCGTCCTTGTGAA...AACGGGGGTGGGGAGGTTCTTAGTTGCGAAGGAGCCAAGCTCCTGATGGACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358625.4
CDS GCA 72 bp GGAACCTGCGCGTTCACAGGGTTCGGAAGCCCGGGCTaGGCCTTCCCGCGGGGCCGGCTGCCGGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GTCAFTGFGSPG*AFPRGRLPGWG
Trigger: CCCCCAGCCCGGCAGCCGGCCCCGCGGGAAGGCGCAGCCCGGGCTTCCGAACCCTGTGAACGCGCAGGTTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS CCA 72 bp CGGTGCACGAACCTGCTCCCCGCCAGCCCCGCGGACTaGCAGGGCCGCTCTGGAGTCACCCGCGCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: RCTNLLPASPAD*QGRSGVTRARS
Trigger: GGAGCGGGCGCGGGTGACTCCAGAGCGGCCCTGCCAGTCCGCGGGGCTGGCGGGGAGCAGGTTCGTGCACCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS CAA 90 bp ACACCAGCGGCCCTCCGGGACCTGCGCAGGTGGCGTCGCCCGGCGTaGTCTCCGGAGTCGATTCGGGCCGGGGCACCTCCCCGGGCGACC +
Preference number: 6 (lower is better)
Translates to: TPAALRDLRRWRRPA*SPESIRAGAPPRAT
Trigger: GGTCGCCCGGGGAGGTGCCCCGGCCCGAATCGACTCCGGAGACAACGCCGGGCGACGCCACCTGCGCAGGTCCCGGAGGGCCGCTGGTGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608739.5
ENST00000608937.5
CDS CAA 72 bp GCCCTCCGGGACCTGCGCAGGTGGCGTCGCCCGGCGTaGTCTCCGGAGTCGATTCGGGCCGGGGCACCTCCC +
Preference number: 6 (lower is better)
Translates to: ALRDLRRWRRPA*SPESIRAGAPP
Trigger: GGGAGGTGCCCCGGCCCGAATCGACTCCGGAGACAACGCCGGGCGACGCCACCTGCGCAGGTCCCGGAGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608739.5
ENST00000608937.5
CDS GCA 72 bp CCGGCTGCCGGGCTGGGGGCTCTTCCCGCCTCTGCATaGACAGAGCCCGCGGTGCACGAACCTGCTCCCCGC +
Preference number: 6 (lower is better)
Translates to: PAAGLGALPASA*TEPAVHEPAPR
Trigger: GCGGGGAGCAGGTTCGTGCACCGCGGGCTCTGTGCATGCAGAGGCGGGAAGAGCCCCCAGCCCGGCAGCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS GCA 72 bp GGGCTCTTCCCGCCTCTGCATGCACAGAGCCCGCGGTaGACGAACCTGCTCCCCGCCAGCCCCGCGGACTGG +
Preference number: 6 (lower is better)
Translates to: GLFPPLHAQSPR*TNLLPASPADW
Trigger: CCAGTCCGCGGGGCTGGCGGGGAGCAGGTTCGTGCACCGCGGGCTCTGTGCATGCAGAGGCGGGAAGAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS GCA 72 bp CGCCCTGTACACAGACACCAGCGGCCCTCCGGGACCTaGGCAGGTGGCGTCGCCCGGCGTTGTCTCCGGAGT +
Preference number: 6 (lower is better)
Translates to: RPVHRHQRPSGT*AGGVARRCLRS
Trigger: ACTCCGGAGACAACGCCGGGCGACGCCACCTGCGCAGGTCCCGGAGGGCCGCTGGTGTCTGTGTACAGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608739.5
ENST00000608937.5
CDS CCA 72 bp ACACAGACACCAGCGGCCCTCCGGGACCTGCGCAGGTaGCGTCGCCCGGCGTTGTCTCCGGAGTCGATTCGG +
Preference number: 6 (lower is better)
Translates to: TQTPAALRDLRR*RRPALSPESIR
Trigger: CCGAATCGACTCCGGAGACAACGCCGGGCGACGCCACCTGCGCAGGTCCCGGAGGGCCGCTGGTGTCTGTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608739.5
ENST00000608937.5
CDS CCA 72 bp ACGGATGAGAGCGGCAGTGGGCATTTGGAAAGCACCTaGGGCCGCGCCCGGGCGCAGTGCCCCCATGTGGCC +
Preference number: 6 (lower is better)
Translates to: TDESGSGHLEST*GRARAQCPHVA
Trigger: GGCCACATGGGGGCACTGCGCCCGGGCGCGGCCCCAGGTGCTTTCCAAATGCCCACTGCCGCTCTCATCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS CCA 72 bp TCCCACCCCGGGCGGGCAGGACGATTCCTGCCCATCTaGAAGACCAGGAACCTGCGCGTTCACAGGGTTCGG +
Preference number: 6 (lower is better)
Translates to: SHPGRAGRFLPI*KTRNLRVHRVR
Trigger: CCGAACCCTGTGAACGCGCAGGTTCCTGGTCTTCCAGATGGGCAGGAATCGTCCTGCCCGCCCGGGGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS CAA 72 bp ATCATCGCTGGTACGGATGAGAGCGGCAGTGGGCATTaGGAAAGCACCTGGGGCCGCGCCCGGGCGCAGTGC +
Preference number: 6 (lower is better)
Translates to: IIAGTDESGSGH*ESTWGRARAQC
Trigger: GCACTGCGCCCGGGCGCGGCCCCAGGTGCTTTCCAAATGCCCACTGCCGCTCTCATCCGTACCAGCGATGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS CAA 90 bp CCCTTCTTGATCATCGCTGGTACGGATGAGAGCGGCAGTGGGCATTaGGAAAGCACCTGGGGCCGCGCCCGGGCGCAGTGCCCCCATGTG +
Preference number: 6 (lower is better)
Translates to: PFLIIAGTDESGSGH*ESTWGRARAQCPHV
Trigger: CACATGGGGGCACTGCGCCCGGGCGCGGCCCCAGGTGCTTTCCAAATGCCCACTGCCGCTCTCATCCGTACCAGCGATGATCAAGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS GCA 72 bp CAGGACGATTCCTGCCCATCTGGAAGACCAGGAACCTaGGCGTTCACAGGGTTCGGAAGCCCGGGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: QDDSCPSGRPGT*AFTGFGSPGCA
Trigger: GGCGCAGCCCGGGCTTCCGAACCCTGTGAACGCGCAGGTTCCTGGTCTTCCAGATGGGCAGGAATCGTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS GCA 72 bp ATGTGGCCTCCCACCCCGGGCGGGCAGGACGATTCCTaGCCATCTGGAAGACCAGGAACCTGCGCGTTCACA +
Preference number: 6 (lower is better)
Translates to: MWPPTPGGQDDS*PSGRPGTCAFT
Trigger: TGTGAACGCGCAGGTTCCTGGTCTTCCAGATGGGCAGGAATCGTCCTGCCCGCCCGGGGTGGGAGGCCACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608937.5
CDS GCA 72 bp GGACCCGGTGACAGAGGCAGTAGGAAAGTGCTAGTGTaGCCTCGCGTTTCCACAGACAGCACGCCCTGTACA +
Preference number: 6 (lower is better)
Translates to: GPGDRGSRKVLV*PRVSTDSTPCT
Trigger: TGTACAGGGCGTGCTGTCTGTGGAAACGCGAGGGCACACTAGCACTTTCCTACTGCCTCTGTCACCGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608739.5
ENST00000608937.5